PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 111.561 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 SUPERFAMILY SSF54980 609 695 3.21E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 Gene3D G3DSA:3.40.50.300 6 293 1.9E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 SUPERFAMILY SSF54211 484 605 1.16E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.3E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.3E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.3E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.3E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 698 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 Pfam PF00679 Elongation factor G C-terminus 606 692 1.0E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 Pfam PF03764 Elongation factor G, domain IV 484 604 1.3E-48 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.1E-64 T 22-04-2016 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 SMART SM00838 606 694 2.8E-55 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 Gene3D G3DSA:3.30.70.870 410 485 2.0E-38 T 22-04-2016 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 SUPERFAMILY SSF52540 6 288 4.59E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 PANTHER PTHR23115:SF66 308 698 0.0 T 22-04-2016 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 SMART SM00889 485 604 5.5E-76 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 Pfam PF14492 Elongation Factor G, domain II 409 483 1.3E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.0E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 Gene3D G3DSA:3.30.70.240 605 692 8.3E-34 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 SUPERFAMILY SSF54980 409 486 1.73E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 Gene3D G3DSA:2.40.30.10 313 409 8.7E-38 T 22-04-2016 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 SUPERFAMILY SSF50447 310 407 2.21E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 SUPERFAMILY SSF50447 255 281 2.21E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 Gene3D G3DSA:3.30.230.10 489 604 2.0E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 PANTHER PTHR23115 308 698 0.0 T 22-04-2016 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 PNUC_RS00300 5b9b9e618ff9cfd46a3eb7d24d9a9660 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.3E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PNUC_RS05525 b8b8660018a5a2d2c4b0f92a9930c08a 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PNUC_RS05525 b8b8660018a5a2d2c4b0f92a9930c08a 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 511 41.727 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PNUC_RS05525 b8b8660018a5a2d2c4b0f92a9930c08a 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PNUC_RS05525 b8b8660018a5a2d2c4b0f92a9930c08a 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 501 3.4E-34 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PNUC_RS05525 b8b8660018a5a2d2c4b0f92a9930c08a 515 PANTHER PTHR10277 1 510 6.8E-230 T 22-04-2016 PNUC_RS05525 b8b8660018a5a2d2c4b0f92a9930c08a 515 SUPERFAMILY SSF110921 393 501 3.4E-26 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PNUC_RS05525 b8b8660018a5a2d2c4b0f92a9930c08a 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 499 3.5E-205 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PNUC_RS05525 b8b8660018a5a2d2c4b0f92a9930c08a 515 SMART SM00917 371 502 1.5E-40 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PNUC_RS05525 b8b8660018a5a2d2c4b0f92a9930c08a 515 SUPERFAMILY SSF51569 1 292 8.97E-96 T 22-04-2016 PNUC_RS05525 b8b8660018a5a2d2c4b0f92a9930c08a 515 Pfam PF00682 HMGL-like 4 274 3.4E-93 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PNUC_RS05525 b8b8660018a5a2d2c4b0f92a9930c08a 515 PANTHER PTHR10277:SF9 1 510 6.8E-230 T 22-04-2016 PNUC_RS05525 b8b8660018a5a2d2c4b0f92a9930c08a 515 Gene3D G3DSA:3.20.20.70 1 347 1.6E-143 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS05645 fb26cf714fbe57183c43a556a489621f 196 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 194 48.214 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PNUC_RS05645 fb26cf714fbe57183c43a556a489621f 196 PANTHER PTHR11067:SF9 1 195 2.6E-67 T 22-04-2016 PNUC_RS05645 fb26cf714fbe57183c43a556a489621f 196 SUPERFAMILY SSF52972 1 193 4.97E-68 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PNUC_RS05645 fb26cf714fbe57183c43a556a489621f 196 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 192 5.7E-51 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PNUC_RS05645 fb26cf714fbe57183c43a556a489621f 196 Pfam PF01725 Ham1 family 4 189 9.6E-52 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PNUC_RS05645 fb26cf714fbe57183c43a556a489621f 196 PANTHER PTHR11067 1 195 2.6E-67 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PNUC_RS05645 fb26cf714fbe57183c43a556a489621f 196 Gene3D G3DSA:3.90.950.10 1 194 3.2E-74 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Gene3D G3DSA:3.40.50.1380 946 1084 3.0E-38 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Gene3D G3DSA:3.40.50.20 4 108 3.6E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 PANTHER PTHR11405 1 1063 0.0 T 22-04-2016 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Gene3D G3DSA:3.40.50.20 540 667 9.5E-61 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 847 854 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 304 311 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 429 549 1.6E-40 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 SUPERFAMILY SSF52440 561 680 4.89E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Gene3D G3DSA:3.30.1490.20 692 749 5.4E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Gene3D G3DSA:3.30.470.20 207 406 1.2E-77 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Gene3D G3DSA:3.30.470.20 750 943 3.5E-79 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 SMART SM01096 426 549 6.7E-74 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Pfam PF02142 MGS-like domain 965 1051 1.5E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 SMART SM00851 964 1051 1.9E-28 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 SUPERFAMILY SSF56059 128 408 5.66E-107 T 22-04-2016 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1060 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1072 13.203 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 SUPERFAMILY SSF56059 678 942 3.71E-104 T 22-04-2016 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Gene3D G3DSA:1.10.1030.10 407 539 1.0E-51 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.5E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.5E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 175 187 3.5E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 246 263 3.5E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 304 333 3.5E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 387 405 3.5E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 211 230 3.5E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 SUPERFAMILY SSF52335 944 1085 6.15E-36 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 SUPERFAMILY SSF48108 403 554 1.44E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 PANTHER PTHR11405:SF5 1 1063 0.0 T 22-04-2016 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1079 13.434 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 678 884 8.8E-37 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 341 4.3E-70 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 Gene3D G3DSA:3.30.1490.20 143 206 1.3E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 171 185 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 714 728 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS05320 67f9906ea5dc63ec962eb45039909d35 1087 SUPERFAMILY SSF52440 1 127 5.04E-51 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS09685 03101b59d1708c9e3efe687a0776148e 258 PANTHER PTHR11727 2 251 2.6E-74 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PNUC_RS09685 03101b59d1708c9e3efe687a0776148e 258 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 2 257 49.13 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PNUC_RS09685 03101b59d1708c9e3efe687a0776148e 258 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 34 61 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 PNUC_RS09685 03101b59d1708c9e3efe687a0776148e 258 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 2 253 9.5E-78 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PNUC_RS09685 03101b59d1708c9e3efe687a0776148e 258 Gene3D G3DSA:1.10.8.100 200 256 4.7E-13 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like PNUC_RS09685 03101b59d1708c9e3efe687a0776148e 258 SMART SM00650 18 192 5.2E-69 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 PNUC_RS09685 03101b59d1708c9e3efe687a0776148e 258 SUPERFAMILY SSF53335 1 256 2.48E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS09685 03101b59d1708c9e3efe687a0776148e 258 Pfam PF00398 Ribosomal RNA adenine dimethylase 1 251 5.2E-63 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PNUC_RS09685 03101b59d1708c9e3efe687a0776148e 258 Gene3D G3DSA:3.40.50.150 2 192 4.8E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS09405 29ac84aa8b9d47093e3de078a69525c9 394 Pfam PF02222 ATP-grasp domain 140 292 2.3E-46 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 PNUC_RS09405 29ac84aa8b9d47093e3de078a69525c9 394 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 13 376 38.954 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 PNUC_RS09405 29ac84aa8b9d47093e3de078a69525c9 394 SUPERFAMILY SSF56059 110 312 1.31E-53 T 22-04-2016 PNUC_RS09405 29ac84aa8b9d47093e3de078a69525c9 394 PANTHER PTHR11609 3 386 6.4E-123 T 22-04-2016 PNUC_RS09405 29ac84aa8b9d47093e3de078a69525c9 394 SUPERFAMILY SSF52440 7 107 1.09E-26 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS09405 29ac84aa8b9d47093e3de078a69525c9 394 PANTHER PTHR11609:SF5 3 386 6.4E-123 T 22-04-2016 PNUC_RS09405 29ac84aa8b9d47093e3de078a69525c9 394 Gene3D G3DSA:3.40.50.20 5 119 4.2E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS09405 29ac84aa8b9d47093e3de078a69525c9 394 Gene3D G3DSA:3.30.470.20 193 387 3.3E-67 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS09405 29ac84aa8b9d47093e3de078a69525c9 394 SUPERFAMILY SSF51246 316 388 3.45E-15 T 22-04-2016 IPR011054 Rudiment single hybrid motif PNUC_RS09405 29ac84aa8b9d47093e3de078a69525c9 394 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 14 379 7.6E-109 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 PNUC_RS09405 29ac84aa8b9d47093e3de078a69525c9 394 Gene3D G3DSA:3.30.1490.20 131 190 6.9E-15 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 Gene3D G3DSA:3.40.50.1270 186 387 8.3E-81 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 Pfam PF00162 Phosphoglycerate kinase 19 389 4.6E-136 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 PRINTS PR00477 Phosphoglycerate kinase family signature 115 130 2.0E-79 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 PRINTS PR00477 Phosphoglycerate kinase family signature 319 344 2.0E-79 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 PRINTS PR00477 Phosphoglycerate kinase family signature 174 196 2.0E-79 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 PRINTS PR00477 Phosphoglycerate kinase family signature 375 392 2.0E-79 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 PRINTS PR00477 Phosphoglycerate kinase family signature 143 165 2.0E-79 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 PRINTS PR00477 Phosphoglycerate kinase family signature 352 363 2.0E-79 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 PRINTS PR00477 Phosphoglycerate kinase family signature 197 216 2.0E-79 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 PRINTS PR00477 Phosphoglycerate kinase family signature 41 63 2.0E-79 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 PRINTS PR00477 Phosphoglycerate kinase family signature 19 35 2.0E-79 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 PIRSF PIRSF000724 5 403 2.7E-133 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 13 399 38.472 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 Gene3D G3DSA:3.40.50.1260 19 185 4.5E-62 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 SUPERFAMILY SSF53748 19 399 1.14E-137 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 24 34 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS09430 d1edc8b06f30028fc142eb0647a59f98 403 PANTHER PTHR11406 3 402 4.1E-180 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 8 91 6.2E-18 T 22-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 PANTHER PTHR24093:SF50 100 810 1.6E-144 T 22-04-2016 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 Gene3D G3DSA:2.70.150.10 283 422 1.6E-21 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 SUPERFAMILY SSF81653 336 421 6.41E-21 T 22-04-2016 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 Pfam PF00403 Heavy-metal-associated domain 102 163 1.5E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 Gene3D G3DSA:3.40.50.1000 494 536 5.0E-41 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 Gene3D G3DSA:3.40.50.1000 626 775 5.0E-41 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 Gene3D G3DSA:3.30.70.100 100 166 4.0E-15 T 22-04-2016 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 522 528 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 257 808 7.6E-133 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 PANTHER PTHR24093 100 810 1.6E-144 T 22-04-2016 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 372 386 2.21E-20 T 22-04-2016 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 729 741 2.21E-20 T 22-04-2016 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 706 725 2.21E-20 T 22-04-2016 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 534 2.21E-20 T 22-04-2016 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 663 2.21E-20 T 22-04-2016 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 Pfam PF00702 haloacid dehalogenase-like hydrolase 519 720 6.3E-31 T 22-04-2016 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 Pfam PF00122 E1-E2 ATPase 290 511 1.8E-47 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 236 809 1.5E-125 T 22-04-2016 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 292 541 1.4E-29 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 621 786 5.3E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 SUPERFAMILY SSF56784 583 805 5.02E-44 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 SUPERFAMILY SSF56784 519 538 5.02E-44 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS02365 ebb3a06c732891b9e93310454cd434d2 811 SUPERFAMILY SSF55008 96 168 7.2E-17 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PNUC_RS01460 205d464a69f6bc2741e43507c6479969 139 PANTHER PTHR30558 6 137 4.5E-30 T 22-04-2016 PNUC_RS01460 205d464a69f6bc2741e43507c6479969 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 138 2.5E-26 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PNUC_RS01460 205d464a69f6bc2741e43507c6479969 139 TIGRFAM TIGR02801 tolR: protein TolR 14 136 2.3E-38 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 PNUC_RS09375 44dcc86b8e603254be7265cb5a5934cf 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.841 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PNUC_RS09375 44dcc86b8e603254be7265cb5a5934cf 96 Gene3D G3DSA:2.30.33.40 1 95 1.9E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PNUC_RS09375 44dcc86b8e603254be7265cb5a5934cf 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 PNUC_RS09375 44dcc86b8e603254be7265cb5a5934cf 96 SUPERFAMILY SSF50129 1 95 2.59E-34 T 22-04-2016 IPR011032 GroES-like PNUC_RS09375 44dcc86b8e603254be7265cb5a5934cf 96 PANTHER PTHR10772 1 95 7.2E-44 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PNUC_RS09375 44dcc86b8e603254be7265cb5a5934cf 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.8E-35 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PNUC_RS09375 44dcc86b8e603254be7265cb5a5934cf 96 SMART SM00883 2 94 3.0E-57 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PNUC_RS09375 44dcc86b8e603254be7265cb5a5934cf 96 PRINTS PR00297 10kDa chaperonin signature 60 72 2.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PNUC_RS09375 44dcc86b8e603254be7265cb5a5934cf 96 PRINTS PR00297 10kDa chaperonin signature 3 18 2.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PNUC_RS09375 44dcc86b8e603254be7265cb5a5934cf 96 PRINTS PR00297 10kDa chaperonin signature 25 46 2.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PNUC_RS09375 44dcc86b8e603254be7265cb5a5934cf 96 PRINTS PR00297 10kDa chaperonin signature 81 94 2.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PNUC_RS04905 9c558fde97861cdc860ea37fda9b0f60 251 Pfam PF01564 Spermine/spermidine synthase 77 184 2.1E-7 T 22-04-2016 PNUC_RS04905 9c558fde97861cdc860ea37fda9b0f60 251 SUPERFAMILY SSF53335 4 235 7.8E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS04905 9c558fde97861cdc860ea37fda9b0f60 251 Gene3D G3DSA:3.40.50.150 8 242 1.4E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01920 4de3c0c07d8e7cd3bfd949dcc62c6071 744 SUPERFAMILY SSF53659 5 741 0.0 T 22-04-2016 PNUC_RS01920 4de3c0c07d8e7cd3bfd949dcc62c6071 744 Gene3D G3DSA:3.40.718.10 540 647 4.5E-31 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PNUC_RS01920 4de3c0c07d8e7cd3bfd949dcc62c6071 744 Gene3D G3DSA:3.40.718.10 177 286 4.5E-31 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PNUC_RS01920 4de3c0c07d8e7cd3bfd949dcc62c6071 744 Gene3D G3DSA:3.40.718.10 341 364 4.5E-31 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PNUC_RS01920 4de3c0c07d8e7cd3bfd949dcc62c6071 744 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 739 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PNUC_RS01920 4de3c0c07d8e7cd3bfd949dcc62c6071 744 PANTHER PTHR36999 2 744 0.0 T 22-04-2016 PNUC_RS01920 4de3c0c07d8e7cd3bfd949dcc62c6071 744 PIRSF PIRSF009407 1 743 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PNUC_RS01920 4de3c0c07d8e7cd3bfd949dcc62c6071 744 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 742 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PNUC_RS00875 fa45f061bfc5b2ebdeda41c6672bc626 590 SUPERFAMILY SSF56601 180 563 3.35E-88 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS00875 fa45f061bfc5b2ebdeda41c6672bc626 590 PANTHER PTHR30627:SF1 15 584 4.7E-184 T 22-04-2016 PNUC_RS00875 fa45f061bfc5b2ebdeda41c6672bc626 590 Gene3D G3DSA:3.90.1310.10 134 234 4.8E-30 T 22-04-2016 PNUC_RS00875 fa45f061bfc5b2ebdeda41c6672bc626 590 PANTHER PTHR30627 15 584 4.7E-184 T 22-04-2016 PNUC_RS00875 fa45f061bfc5b2ebdeda41c6672bc626 590 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 212 6.7E-21 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PNUC_RS00875 fa45f061bfc5b2ebdeda41c6672bc626 590 Gene3D G3DSA:3.40.710.10 235 554 4.9E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS00875 fa45f061bfc5b2ebdeda41c6672bc626 590 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 548 3.0E-70 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PNUC_RS00875 fa45f061bfc5b2ebdeda41c6672bc626 590 SUPERFAMILY SSF56519 60 227 7.06E-42 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 Gene3D G3DSA:3.40.50.620 440 596 4.5E-146 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 Gene3D G3DSA:3.40.50.620 644 673 4.5E-146 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 Gene3D G3DSA:3.40.50.620 1 226 4.5E-146 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 SUPERFAMILY SSF52374 434 693 7.85E-141 T 22-04-2016 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 SUPERFAMILY SSF52374 5 231 7.85E-141 T 22-04-2016 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 Gene3D G3DSA:3.90.740.10 227 439 3.1E-54 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 890 22.705 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 SUPERFAMILY SSF47323 689 889 2.62E-31 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 226 421 1.6E-66 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 Pfam PF09334 tRNA synthetases class I (M) 44 177 4.4E-18 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 580 590 2.2E-48 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 191 204 2.2E-48 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 133 150 2.2E-48 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 547 569 2.2E-48 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 220 239 2.2E-48 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 159 175 2.2E-48 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 510 528 2.2E-48 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 SUPERFAMILY SSF50677 234 433 4.71E-50 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 889 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 Pfam PF08264 Anticodon-binding domain of tRNA 726 852 1.3E-17 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PANTHER PTHR11946:SF7 644 890 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PANTHER PTHR11946:SF7 1 212 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PANTHER PTHR11946:SF7 253 597 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 435 595 9.9E-8 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 644 684 8.1E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 Gene3D G3DSA:1.10.730.10 674 826 4.0E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PANTHER PTHR11946 644 890 0.0 T 22-04-2016 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PANTHER PTHR11946 1 212 0.0 T 22-04-2016 PNUC_RS01235 4dfd76dd989645e670a33748dbb36532 890 PANTHER PTHR11946 253 597 0.0 T 22-04-2016 PNUC_RS03810 33e1a5dfd1d42e764711669679af8321 110 Gene3D G3DSA:1.10.760.10 39 103 7.0E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS03810 33e1a5dfd1d42e764711669679af8321 110 SUPERFAMILY SSF46626 41 103 5.32E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS03810 33e1a5dfd1d42e764711669679af8321 110 Pfam PF00034 Cytochrome c 41 88 8.1E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS05170 a371393be71fd85ec1887fec775879c5 304 Gene3D G3DSA:3.40.190.10 124 230 4.8E-29 T 22-04-2016 PNUC_RS05170 a371393be71fd85ec1887fec775879c5 304 Gene3D G3DSA:3.40.190.10 35 123 3.9E-25 T 22-04-2016 PNUC_RS05170 a371393be71fd85ec1887fec775879c5 304 Gene3D G3DSA:3.40.190.10 231 272 3.9E-25 T 22-04-2016 PNUC_RS05170 a371393be71fd85ec1887fec775879c5 304 SUPERFAMILY SSF53850 8 271 4.64E-61 T 22-04-2016 PNUC_RS05170 a371393be71fd85ec1887fec775879c5 304 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 268 3.9E-48 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PNUC_RS05170 a371393be71fd85ec1887fec775879c5 304 SMART SM00062 38 270 1.3E-47 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PNUC_RS05170 a371393be71fd85ec1887fec775879c5 304 PANTHER PTHR30085 13 295 3.7E-86 T 22-04-2016 PNUC_RS05170 a371393be71fd85ec1887fec775879c5 304 PANTHER PTHR30085:SF2 13 295 3.7E-86 T 22-04-2016 PNUC_RS06030 5b1d6dd23c4616f0f470e4bf166150bb 263 PANTHER PTHR30570 14 262 2.9E-42 T 22-04-2016 PNUC_RS06030 5b1d6dd23c4616f0f470e4bf166150bb 263 SUPERFAMILY SSF53850 14 260 1.09E-53 T 22-04-2016 PNUC_RS06030 5b1d6dd23c4616f0f470e4bf166150bb 263 Gene3D G3DSA:3.40.190.10 93 218 6.1E-31 T 22-04-2016 PNUC_RS06030 5b1d6dd23c4616f0f470e4bf166150bb 263 Pfam PF12849 PBP superfamily domain 14 240 5.2E-25 T 22-04-2016 IPR024370 PBP domain PNUC_RS06030 5b1d6dd23c4616f0f470e4bf166150bb 263 PANTHER PTHR30570:SF1 14 262 2.9E-42 T 22-04-2016 PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 301 2.1E-36 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 PIRSF PIRSF500134 1 454 3.9E-182 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 SMART SM00984 325 437 8.1E-48 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 SUPERFAMILY SSF51735 2 199 1.91E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 SUPERFAMILY SSF48179 209 303 2.72E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 SUPERFAMILY SSF52413 311 447 2.88E-38 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 PANTHER PTHR11374 1 452 3.2E-235 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 436 4.0E-30 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 Gene3D G3DSA:3.40.50.720 2 211 3.9E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 Gene3D G3DSA:3.40.50.720 240 453 8.5E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 PIRSF PIRSF000124 1 452 1.6E-146 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2 182 8.8E-65 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 433 7.5E-131 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 Gene3D G3DSA:1.20.5.100 212 237 2.8E-17 T 22-04-2016 PNUC_RS02625 6291e29cafb73db5ee5fb382c82344ec 454 PANTHER PTHR11374:SF18 1 452 3.2E-235 T 22-04-2016 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 TIGRFAM TIGR01056 topB: DNA topoisomerase III 5 636 5.3E-170 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 PANTHER PTHR11390:SF21 3 515 2.5E-150 T 22-04-2016 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 PANTHER PTHR11390:SF21 532 621 2.5E-150 T 22-04-2016 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 PANTHER PTHR11390 3 515 2.5E-150 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 PANTHER PTHR11390 532 621 2.5E-150 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 102 115 4.6E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 532 546 4.6E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 324 333 4.6E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 418 434 4.6E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 4.6E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 318 333 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 Gene3D G3DSA:3.40.50.140 6 154 8.7E-42 T 22-04-2016 IPR006171 Toprim domain PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 Pfam PF01751 Toprim domain 7 134 4.6E-12 T 22-04-2016 IPR006171 Toprim domain PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 SMART SM00493 5 128 2.7E-15 T 22-04-2016 IPR006171 Toprim domain PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 SMART SM00437 281 569 6.0E-71 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 Gene3D G3DSA:1.10.460.10 158 216 9.2E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 Gene3D G3DSA:1.10.460.10 502 623 9.2E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 Pfam PF13342 C-terminal repeat of topoisomerase 774 834 7.9E-19 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 Pfam PF13342 C-terminal repeat of topoisomerase 658 727 2.2E-18 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 Pfam PF01131 DNA topoisomerase 155 608 4.6E-118 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 SMART SM00436 128 223 9.0E-23 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 SUPERFAMILY SSF56712 5 622 1.44E-171 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 Gene3D G3DSA:2.70.20.10 380 499 8.3E-18 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PNUC_RS10780 704c44765d7203971df563e5a3f32515 876 Gene3D G3DSA:2.70.20.10 217 343 8.3E-23 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PNUC_RS01870 779af9f94255a4daf26123f091a7e0bc 292 PANTHER PTHR11795 1 292 2.3E-72 T 22-04-2016 PNUC_RS01870 779af9f94255a4daf26123f091a7e0bc 292 PANTHER PTHR11795:SF398 1 292 2.3E-72 T 22-04-2016 PNUC_RS01870 779af9f94255a4daf26123f091a7e0bc 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 276 4.3E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PNUC_RS07400 708b81f09ef27b980f8687ec3b3a5f97 289 SUPERFAMILY SSF53335 9 285 2.74E-81 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS07400 708b81f09ef27b980f8687ec3b3a5f97 289 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 276 38.572 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 PNUC_RS07400 708b81f09ef27b980f8687ec3b3a5f97 289 PANTHER PTHR37426:SF1 2 288 5.4E-96 T 22-04-2016 PNUC_RS07400 708b81f09ef27b980f8687ec3b3a5f97 289 PANTHER PTHR37426 2 288 5.4E-96 T 22-04-2016 PNUC_RS07400 708b81f09ef27b980f8687ec3b3a5f97 289 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 35 280 2.7E-71 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 PNUC_RS07400 708b81f09ef27b980f8687ec3b3a5f97 289 Gene3D G3DSA:3.40.50.150 1 285 1.9E-104 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01095 615329a92d70a7f0138f562781cd7f8e 394 PIRSF PIRSF000355 44 394 1.3E-132 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 PNUC_RS01095 615329a92d70a7f0138f562781cd7f8e 394 SUPERFAMILY SSF47240 57 367 4.73E-94 T 22-04-2016 IPR009078 Ferritin-like superfamily PNUC_RS01095 615329a92d70a7f0138f562781cd7f8e 394 PANTHER PTHR23409:SF18 30 389 5.0E-152 T 22-04-2016 PNUC_RS01095 615329a92d70a7f0138f562781cd7f8e 394 Gene3D G3DSA:1.10.620.20 63 369 2.2E-109 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 PNUC_RS01095 615329a92d70a7f0138f562781cd7f8e 394 PANTHER PTHR23409 30 389 5.0E-152 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 PNUC_RS01095 615329a92d70a7f0138f562781cd7f8e 394 Pfam PF00268 Ribonucleotide reductase, small chain 74 361 2.3E-81 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 18 436 3.1E-81 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 Gene3D G3DSA:3.30.70.1170 181 243 7.8E-19 T 22-04-2016 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 381 397 2.1E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 331 343 2.1E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 264 274 2.1E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 418 435 2.1E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 235 249 2.1E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 Pfam PF01029 NusB family 17 131 1.5E-6 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 SUPERFAMILY SSF53335 148 435 4.65E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 Gene3D G3DSA:3.40.50.150 245 435 3.4E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 PANTHER PTHR22807 154 438 3.9E-66 T 22-04-2016 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 SUPERFAMILY SSF48013 18 157 3.27E-11 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 330 341 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 Pfam PF01189 16S rRNA methyltransferase RsmB/F 252 410 1.0E-48 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS10760 583670ce21c3c4531c582cad27b44603 438 Gene3D G3DSA:1.10.940.10 18 157 7.2E-11 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 41 301 3.1E-90 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 SUPERFAMILY SSF46626 213 303 1.39E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 PANTHER PTHR33751:SF1 27 305 5.5E-92 T 22-04-2016 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 PIRSF PIRSF000006 5 302 1.8E-104 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 SUPERFAMILY SSF46626 63 86 7.59E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 SUPERFAMILY SSF46626 114 217 7.59E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 44 90 1.2E-24 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 Gene3D G3DSA:1.10.760.10 68 90 8.7E-35 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 Gene3D G3DSA:1.10.760.10 222 308 3.8E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 Gene3D G3DSA:1.10.760.10 129 221 8.7E-35 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 PANTHER PTHR33751 27 305 5.5E-92 T 22-04-2016 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 220 295 1.1E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02390 87b1db6e0a0ab9f1899596abc4f342e3 312 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 137 207 4.9E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS08595 2c5ed20270fb78c0dc67ae08e84dbbbe 134 Pfam PF01124 MAPEG family 9 123 9.1E-21 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein PNUC_RS08595 2c5ed20270fb78c0dc67ae08e84dbbbe 134 SUPERFAMILY SSF161084 2 130 6.02E-37 T 22-04-2016 PNUC_RS08595 2c5ed20270fb78c0dc67ae08e84dbbbe 134 Gene3D G3DSA:1.20.120.550 2 130 1.8E-35 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain PNUC_RS08595 2c5ed20270fb78c0dc67ae08e84dbbbe 134 PANTHER PTHR10250:SF15 1 130 2.6E-28 T 22-04-2016 PNUC_RS08595 2c5ed20270fb78c0dc67ae08e84dbbbe 134 PANTHER PTHR10250 1 130 2.6E-28 T 22-04-2016 PNUC_RS04265 897470e454a9576950c7104b3dd6624a 527 SUPERFAMILY SSF52540 288 521 2.3E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04265 897470e454a9576950c7104b3dd6624a 527 SUPERFAMILY SSF52540 3 229 4.56E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04265 897470e454a9576950c7104b3dd6624a 527 Gene3D G3DSA:3.40.50.300 310 523 2.5E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04265 897470e454a9576950c7104b3dd6624a 527 Gene3D G3DSA:3.40.50.300 124 272 5.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04265 897470e454a9576950c7104b3dd6624a 527 Gene3D G3DSA:3.40.50.300 2 89 5.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04265 897470e454a9576950c7104b3dd6624a 527 Pfam PF12848 ABC transporter 216 300 2.9E-22 T 22-04-2016 IPR032781 ABC-transporter extension domain PNUC_RS04265 897470e454a9576950c7104b3dd6624a 527 PANTHER PTHR19211:SF38 1 523 2.6E-303 T 22-04-2016 PNUC_RS04265 897470e454a9576950c7104b3dd6624a 527 SMART SM00382 18 230 6.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS04265 897470e454a9576950c7104b3dd6624a 527 SMART SM00382 335 506 1.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS04265 897470e454a9576950c7104b3dd6624a 527 Pfam PF00005 ABC transporter 327 462 1.1E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS04265 897470e454a9576950c7104b3dd6624a 527 Pfam PF00005 ABC transporter 10 176 2.2E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS04265 897470e454a9576950c7104b3dd6624a 527 PANTHER PTHR19211 1 523 2.6E-303 T 22-04-2016 PNUC_RS00430 66147b5387fafe34945a03a64e50e61a 121 SUPERFAMILY SSF46946 2 114 6.18E-45 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PNUC_RS00430 66147b5387fafe34945a03a64e50e61a 121 PIRSF PIRSF002134 1 121 8.2E-40 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00430 66147b5387fafe34945a03a64e50e61a 121 Gene3D G3DSA:4.10.910.10 72 121 1.4E-26 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal PNUC_RS00430 66147b5387fafe34945a03a64e50e61a 121 Pfam PF00416 Ribosomal protein S13/S18 63 108 3.2E-18 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00430 66147b5387fafe34945a03a64e50e61a 121 Gene3D G3DSA:1.10.8.50 1 71 3.0E-27 T 22-04-2016 PNUC_RS00430 66147b5387fafe34945a03a64e50e61a 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS00430 66147b5387fafe34945a03a64e50e61a 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.0E-52 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00430 66147b5387fafe34945a03a64e50e61a 121 PANTHER PTHR10871 1 115 1.8E-61 T 22-04-2016 PNUC_RS00430 66147b5387fafe34945a03a64e50e61a 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.472 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 SUPERFAMILY SSF51735 7 246 6.76E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 7.2E-101 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 Gene3D G3DSA:3.40.50.720 1 246 1.9E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.0E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.0E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.0E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PANTHER PTHR24322 12 138 9.5E-64 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PANTHER PTHR24322 154 186 9.5E-64 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.7E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.7E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.7E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.7E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.7E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.7E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PANTHER PTHR24322:SF635 12 138 9.5E-64 T 22-04-2016 PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 PANTHER PTHR24322:SF635 154 186 9.5E-64 T 22-04-2016 PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 6.7E-4 T 22-04-2016 PNUC_RS02095 cef4b6b6b57899c2581239aa51bea0a6 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 2.6E-69 T 22-04-2016 PNUC_RS05575 0d39a510cc394e131aa610314b787787 832 PANTHER PTHR30287 3 832 2.3E-115 T 22-04-2016 PNUC_RS05575 0d39a510cc394e131aa610314b787787 832 Pfam PF12704 MacB-like periplasmic core domain 25 192 4.5E-6 T 22-04-2016 IPR025857 MacB-like periplasmic core domain PNUC_RS05575 0d39a510cc394e131aa610314b787787 832 Pfam PF02687 FtsX-like permease family 711 813 2.0E-6 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PNUC_RS05575 0d39a510cc394e131aa610314b787787 832 Pfam PF02687 FtsX-like permease family 266 379 6.1E-6 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PNUC_RS05395 ff2c07304dc18afe538ced3685a903fa 325 PIRSF PIRSF017082 8 324 1.1E-85 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS05395 ff2c07304dc18afe538ced3685a903fa 325 PANTHER PTHR30349:SF1 10 286 3.6E-85 T 22-04-2016 PNUC_RS05395 ff2c07304dc18afe538ced3685a903fa 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 320 6.1E-85 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS05395 ff2c07304dc18afe538ced3685a903fa 325 SUPERFAMILY SSF53850 115 284 9.83E-12 T 22-04-2016 PNUC_RS05395 ff2c07304dc18afe538ced3685a903fa 325 PANTHER PTHR30349 10 286 3.6E-85 T 22-04-2016 PNUC_RS03450 74bb62b435c8d6db9bab471a2108fe89 190 SUPERFAMILY SSF55068 10 177 3.4E-72 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PNUC_RS03450 74bb62b435c8d6db9bab471a2108fe89 190 Pfam PF01625 Peptide methionine sulfoxide reductase 15 166 5.0E-63 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PNUC_RS03450 74bb62b435c8d6db9bab471a2108fe89 190 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 13 166 2.0E-61 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PNUC_RS03450 74bb62b435c8d6db9bab471a2108fe89 190 Gene3D G3DSA:3.30.1060.10 7 166 5.7E-71 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PNUC_RS03450 74bb62b435c8d6db9bab471a2108fe89 190 PANTHER PTHR10173:SF34 1 166 1.4E-78 T 22-04-2016 PNUC_RS03450 74bb62b435c8d6db9bab471a2108fe89 190 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 12 171 37.062 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PNUC_RS03450 74bb62b435c8d6db9bab471a2108fe89 190 PANTHER PTHR10173 1 166 1.4E-78 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 PNUC_RS04095 1e8cb63e8027e189d00f83f1ec20afb4 310 PANTHER PTHR35008:SF4 27 306 7.4E-89 T 22-04-2016 PNUC_RS04095 1e8cb63e8027e189d00f83f1ec20afb4 310 Gene3D G3DSA:1.10.760.10 53 165 2.7E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04095 1e8cb63e8027e189d00f83f1ec20afb4 310 Gene3D G3DSA:1.10.760.10 179 269 7.2E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04095 1e8cb63e8027e189d00f83f1ec20afb4 310 SUPERFAMILY SSF46626 57 164 2.01E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04095 1e8cb63e8027e189d00f83f1ec20afb4 310 SUPERFAMILY SSF46626 175 293 2.76E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04095 1e8cb63e8027e189d00f83f1ec20afb4 310 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 184 264 9.6E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04095 1e8cb63e8027e189d00f83f1ec20afb4 310 PANTHER PTHR35008 27 306 7.4E-89 T 22-04-2016 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 SMART SM00388 666 733 8.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 Gene3D G3DSA:3.40.50.620 247 352 9.0E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 SMART SM00387 777 888 2.1E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 781 886 6.8E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 Gene3D G3DSA:3.30.450.40 600 649 8.7E-4 T 22-04-2016 IPR029016 GAF domain-like PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 PANTHER PTHR24423:SF562 630 885 3.3E-128 T 22-04-2016 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 PANTHER PTHR24423:SF562 15 198 3.3E-128 T 22-04-2016 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 SUPERFAMILY SSF47384 655 733 1.14E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 Gene3D G3DSA:3.30.565.10 735 889 3.0E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 SUPERFAMILY SSF52402 252 361 1.6E-7 T 22-04-2016 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 Gene3D G3DSA:3.40.50.300 22 230 7.7E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 848 866 5.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 872 885 5.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 829 5.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 Pfam PF13492 GAF domain 533 647 3.4E-10 T 22-04-2016 IPR003018 GAF domain GO:0005515 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 SUPERFAMILY SSF52540 28 139 7.27E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 SUPERFAMILY SSF52540 176 194 7.27E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 Pfam PF00512 His Kinase A (phospho-acceptor) domain 667 733 1.7E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 SUPERFAMILY SSF55781 511 662 3.93E-6 T 22-04-2016 IPR029016 GAF domain-like PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 Pfam PF13493 Domain of unknown function (DUF4118) 404 510 1.0E-29 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 Gene3D G3DSA:1.10.287.130 662 729 5.4E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 24 230 3.7E-92 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 SUPERFAMILY SSF55874 723 887 2.89E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 Gene3D G3DSA:1.20.120.620 400 504 9.7E-35 T 22-04-2016 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 PANTHER PTHR24423 630 885 3.3E-128 T 22-04-2016 PNUC_RS08670 6d6302fe8716cb930fe6e68f699d79a4 897 PANTHER PTHR24423 15 198 3.3E-128 T 22-04-2016 PNUC_RS00295 3c7077c170979d936c224c12191012c2 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.705 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PNUC_RS00295 3c7077c170979d936c224c12191012c2 156 SUPERFAMILY SSF47973 2 149 1.22E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain PNUC_RS00295 3c7077c170979d936c224c12191012c2 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.3E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain PNUC_RS00295 3c7077c170979d936c224c12191012c2 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 5.0E-66 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PNUC_RS00295 3c7077c170979d936c224c12191012c2 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 PNUC_RS00295 3c7077c170979d936c224c12191012c2 156 PIRSF PIRSF002122 3 156 7.8E-58 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 PNUC_RS00295 3c7077c170979d936c224c12191012c2 156 Gene3D G3DSA:1.10.455.10 7 156 2.8E-65 T 22-04-2016 IPR023798 Ribosomal protein S7 domain PNUC_RS00295 3c7077c170979d936c224c12191012c2 156 PANTHER PTHR11205 1 156 2.4E-81 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 PIRSF PIRSF000726 59 416 6.2E-138 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 SUPERFAMILY SSF55021 257 336 5.02E-18 T 22-04-2016 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 Pfam PF00696 Amino acid kinase family 3 229 2.5E-48 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 Gene3D G3DSA:3.40.1160.10 1 254 7.3E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 Pfam PF01842 ACT domain 276 333 6.3E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 PANTHER PTHR21499:SF27 1 416 3.3E-158 T 22-04-2016 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 SUPERFAMILY SSF55021 340 414 1.18E-25 T 22-04-2016 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 60 412 5.3E-113 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 SUPERFAMILY SSF53633 4 250 1.57E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 PANTHER PTHR21499 1 416 3.3E-158 T 22-04-2016 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 Pfam PF13840 ACT domain 348 409 4.7E-17 T 22-04-2016 IPR027795 GATS-like ACT domain PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 4.1E-5 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 4.1E-5 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PNUC_RS04480 20ba59b117c037902e3a5ac5cd2962e4 416 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 413 3.2E-126 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 SMART SM00968 518 627 8.4E-6 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 Pfam PF06470 SMC proteins Flexible Hinge Domain 523 625 1.2E-7 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 SUPERFAMILY SSF75553 478 675 2.22E-9 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 PIRSF PIRSF005719 1 1171 3.0E-247 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 PANTHER PTHR18937 3 429 5.9E-253 T 22-04-2016 PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 PANTHER PTHR18937 455 1171 5.9E-253 T 22-04-2016 PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 PANTHER PTHR18937:SF261 3 429 5.9E-253 T 22-04-2016 PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 PANTHER PTHR18937:SF261 455 1171 5.9E-253 T 22-04-2016 PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1165 21.575 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 Gene3D G3DSA:3.40.50.300 229 230 6.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 Gene3D G3DSA:3.40.50.300 1056 1166 6.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 Gene3D G3DSA:3.40.50.300 3 187 6.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1156 2.0E-60 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1163 0.0 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 SUPERFAMILY SSF52540 265 410 2.44E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 SUPERFAMILY SSF52540 3 52 2.44E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 SUPERFAMILY SSF52540 965 1163 2.82E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07620 e08cd59931db2741642b97a7bf1ed98a 1173 SUPERFAMILY SSF52540 3 210 2.82E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04730 1ad4a495c65afed04398eec0c3b6122b 121 SUPERFAMILY SSF46626 19 113 4.87E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04730 1ad4a495c65afed04398eec0c3b6122b 121 PANTHER PTHR33751 1 119 6.4E-12 T 22-04-2016 PNUC_RS04730 1ad4a495c65afed04398eec0c3b6122b 121 Pfam PF00034 Cytochrome c 26 113 5.6E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04730 1ad4a495c65afed04398eec0c3b6122b 121 Gene3D G3DSA:1.10.760.10 18 114 2.7E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 Pfam PF03484 tRNA synthetase B5 domain 418 483 1.1E-19 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 Pfam PF03483 B3/4 domain 219 399 2.5E-63 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 812 42.731 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 Pfam PF01588 Putative tRNA binding domain 45 151 6.8E-25 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 818 6.8E-232 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 SUPERFAMILY SSF50249 39 198 2.45E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 SMART SM00896 721 818 9.9E-34 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 PANTHER PTHR10947:SF0 2 818 5.1E-263 T 22-04-2016 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 PANTHER PTHR10947 2 818 5.1E-263 T 22-04-2016 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 SUPERFAMILY SSF55681 479 711 4.97E-46 T 22-04-2016 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 SUPERFAMILY SSF54991 718 818 1.44E-20 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 Gene3D G3DSA:3.30.70.380 723 818 1.4E-22 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 SMART SM00874 415 483 9.4E-29 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 Pfam PF03147 Ferredoxin-fold anticodon binding domain 721 818 1.0E-24 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 Gene3D G3DSA:3.30.56.20 414 487 6.3E-26 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 SUPERFAMILY SSF56037 203 405 4.45E-66 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 Gene3D G3DSA:3.30.930.10 504 709 1.4E-57 T 22-04-2016 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 Gene3D G3DSA:3.30.56.10 161 190 1.4E-22 T 22-04-2016 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 Gene3D G3DSA:3.30.56.10 1 38 1.4E-22 T 22-04-2016 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 Gene3D G3DSA:2.40.50.140 41 160 2.1E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 SMART SM00873 218 399 2.8E-81 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 SUPERFAMILY SSF46955 415 487 4.58E-20 T 22-04-2016 IPR009061 Putative DNA-binding domain PNUC_RS04340 cbe74e3e4e765df59df837e82b1766bc 818 Gene3D G3DSA:3.50.40.10 204 404 6.1E-76 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PNUC_RS05355 6d8572941423c4ac3e2ce9015aa068a0 437 PANTHER PTHR30469:SF12 42 424 2.0E-68 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA PNUC_RS05355 6d8572941423c4ac3e2ce9015aa068a0 437 SUPERFAMILY SSF111369 103 339 6.54E-49 T 22-04-2016 PNUC_RS05355 6d8572941423c4ac3e2ce9015aa068a0 437 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 89 415 9.3E-62 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PNUC_RS05355 6d8572941423c4ac3e2ce9015aa068a0 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 125 145 4.9E-5 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PNUC_RS05355 6d8572941423c4ac3e2ce9015aa068a0 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 349 370 4.9E-5 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PNUC_RS05355 6d8572941423c4ac3e2ce9015aa068a0 437 PANTHER PTHR30469 42 424 2.0E-68 T 22-04-2016 PNUC_RS05355 6d8572941423c4ac3e2ce9015aa068a0 437 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 105 335 1.9E-11 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PNUC_RS05355 6d8572941423c4ac3e2ce9015aa068a0 437 Gene3D G3DSA:2.40.50.100 208 240 4.0E-17 T 22-04-2016 PNUC_RS05355 6d8572941423c4ac3e2ce9015aa068a0 437 Gene3D G3DSA:2.40.50.100 114 147 4.0E-17 T 22-04-2016 PNUC_RS03445 8e13fb5b10c9fd47a59d477c0cccb7e9 465 Gene3D G3DSA:3.40.309.10 225 411 1.2E-48 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PNUC_RS03445 8e13fb5b10c9fd47a59d477c0cccb7e9 465 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 238 249 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PNUC_RS03445 8e13fb5b10c9fd47a59d477c0cccb7e9 465 PANTHER PTHR11699 22 465 3.1E-132 T 22-04-2016 PNUC_RS03445 8e13fb5b10c9fd47a59d477c0cccb7e9 465 Gene3D G3DSA:3.40.605.10 8 224 3.2E-47 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PNUC_RS03445 8e13fb5b10c9fd47a59d477c0cccb7e9 465 Pfam PF00171 Aldehyde dehydrogenase family 12 431 9.1E-84 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PNUC_RS03445 8e13fb5b10c9fd47a59d477c0cccb7e9 465 SUPERFAMILY SSF53720 9 432 5.76E-103 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PNUC_RS03445 8e13fb5b10c9fd47a59d477c0cccb7e9 465 PIRSF PIRSF036492 1 465 7.0E-152 T 22-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 PNUC_RS03445 8e13fb5b10c9fd47a59d477c0cccb7e9 465 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 210 217 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PNUC_RS02580 ef816991dcba5fcf25e7ce95b43d4bd0 365 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 5 365 48.223 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 PNUC_RS02580 ef816991dcba5fcf25e7ce95b43d4bd0 365 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 7 364 6.8E-152 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 PNUC_RS02580 ef816991dcba5fcf25e7ce95b43d4bd0 365 SUPERFAMILY SSF53383 6 363 2.93E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS02580 ef816991dcba5fcf25e7ce95b43d4bd0 365 Gene3D G3DSA:3.40.640.10 20 263 1.4E-103 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS02580 ef816991dcba5fcf25e7ce95b43d4bd0 365 PANTHER PTHR21152 1 364 9.2E-172 T 22-04-2016 PNUC_RS02580 ef816991dcba5fcf25e7ce95b43d4bd0 365 Gene3D G3DSA:3.90.1150.10 264 364 2.0E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS02580 ef816991dcba5fcf25e7ce95b43d4bd0 365 Pfam PF00266 Aminotransferase class-V 7 354 4.7E-52 T 22-04-2016 IPR000192 Aminotransferase class V domain PNUC_RS02580 ef816991dcba5fcf25e7ce95b43d4bd0 365 PANTHER PTHR21152:SF1 1 364 9.2E-172 T 22-04-2016 PNUC_RS02580 ef816991dcba5fcf25e7ce95b43d4bd0 365 PIRSF PIRSF000525 1 365 2.6E-148 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 PNUC_RS04060 1b19415d47d788d3bb80834ede99afbb 402 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 18 399 3.5E-171 T 22-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 PNUC_RS04060 1b19415d47d788d3bb80834ede99afbb 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 210 224 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PNUC_RS04060 1b19415d47d788d3bb80834ede99afbb 402 Gene3D G3DSA:3.90.1150.10 268 401 2.8E-49 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS04060 1b19415d47d788d3bb80834ede99afbb 402 PANTHER PTHR11808 15 402 2.9E-196 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PNUC_RS04060 1b19415d47d788d3bb80834ede99afbb 402 PANTHER PTHR11808:SF36 15 402 2.9E-196 T 22-04-2016 PNUC_RS04060 1b19415d47d788d3bb80834ede99afbb 402 Gene3D G3DSA:3.40.640.10 17 267 5.7E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS04060 1b19415d47d788d3bb80834ede99afbb 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 400 2.2E-140 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PNUC_RS04060 1b19415d47d788d3bb80834ede99afbb 402 PIRSF PIRSF001434 3 402 5.4E-132 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PNUC_RS04060 1b19415d47d788d3bb80834ede99afbb 402 SUPERFAMILY SSF53383 39 401 6.32E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 SUPERFAMILY SSF68912 1 46 5.89E-11 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 SMART SM00357 52 118 2.7E-16 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 4.4E-24 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 238.405 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 PANTHER PTHR15184:SF34 54 141 2.2E-183 T 22-04-2016 PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 PANTHER PTHR15184:SF34 160 418 2.2E-183 T 22-04-2016 PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 Gene3D G3DSA:1.10.720.10 1 47 7.6E-19 T 22-04-2016 PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 SUPERFAMILY SSF52540 90 371 1.38E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 PANTHER PTHR15184 54 141 2.2E-183 T 22-04-2016 PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 PANTHER PTHR15184 160 418 2.2E-183 T 22-04-2016 PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.2E-30 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 SUPERFAMILY SSF50249 49 125 1.71E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 Gene3D G3DSA:3.40.50.300 130 418 2.5E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.8E-207 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 3.9E-15 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 SMART SM00382 170 349 4.7E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 Gene3D G3DSA:2.40.50.140 49 117 3.3E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS06860 469d06c7747275898fc9be2cc611b806 420 SMART SM00959 5 47 3.4E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PNUC_RS09985 915b9d92d45f7a9a8cf81c0d6f79ebb0 445 Pfam PF05193 Peptidase M16 inactive domain 195 376 1.3E-36 T 22-04-2016 IPR007863 Peptidase M16, C-terminal PNUC_RS09985 915b9d92d45f7a9a8cf81c0d6f79ebb0 445 Gene3D G3DSA:3.30.830.10 261 442 5.5E-33 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PNUC_RS09985 915b9d92d45f7a9a8cf81c0d6f79ebb0 445 PANTHER PTHR11851 40 444 7.8E-60 T 22-04-2016 PNUC_RS09985 915b9d92d45f7a9a8cf81c0d6f79ebb0 445 Pfam PF00675 Insulinase (Peptidase family M16) 45 186 1.3E-5 T 22-04-2016 IPR011765 Peptidase M16, N-terminal PNUC_RS09985 915b9d92d45f7a9a8cf81c0d6f79ebb0 445 SUPERFAMILY SSF63411 261 443 2.5E-43 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PNUC_RS09985 915b9d92d45f7a9a8cf81c0d6f79ebb0 445 SUPERFAMILY SSF63411 34 234 7.33E-35 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PNUC_RS09985 915b9d92d45f7a9a8cf81c0d6f79ebb0 445 Gene3D G3DSA:3.30.830.10 28 242 3.6E-33 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PNUC_RS09985 915b9d92d45f7a9a8cf81c0d6f79ebb0 445 PANTHER PTHR11851:SF140 40 444 7.8E-60 T 22-04-2016 PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 4.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 Gene3D G3DSA:3.40.50.720 2 257 1.0E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PANTHER PTHR24322 11 137 3.3E-58 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PANTHER PTHR24322 153 185 3.3E-58 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 Pfam PF00106 short chain dehydrogenase 7 197 2.5E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.1E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.1E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.1E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PANTHER PTHR24322:SF328 11 137 3.3E-58 T 22-04-2016 PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 PANTHER PTHR24322:SF328 153 185 3.3E-58 T 22-04-2016 PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 7 258 1.9E-108 T 22-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 SUPERFAMILY SSF51735 5 257 5.9E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS07260 0c0069123ec2be28871d01b752ba6c4d 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PNUC_RS04125 62ca2bee6d810cade6de75e467393f7c 325 Gene3D G3DSA:3.40.250.10 26 186 8.7E-22 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS04125 62ca2bee6d810cade6de75e467393f7c 325 SUPERFAMILY SSF52821 190 321 3.93E-20 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS04125 62ca2bee6d810cade6de75e467393f7c 325 SUPERFAMILY SSF52821 27 182 7.73E-19 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS04125 62ca2bee6d810cade6de75e467393f7c 325 PANTHER PTHR11364:SF3 28 320 2.1E-44 T 22-04-2016 PNUC_RS04125 62ca2bee6d810cade6de75e467393f7c 325 PANTHER PTHR11364 28 320 2.1E-44 T 22-04-2016 PNUC_RS04125 62ca2bee6d810cade6de75e467393f7c 325 SMART SM00450 194 318 3.9E-8 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS04125 62ca2bee6d810cade6de75e467393f7c 325 SMART SM00450 27 170 3.4E-4 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS04125 62ca2bee6d810cade6de75e467393f7c 325 Pfam PF00581 Rhodanese-like domain 30 166 3.2E-8 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS04125 62ca2bee6d810cade6de75e467393f7c 325 Pfam PF00581 Rhodanese-like domain 197 314 3.8E-9 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS04125 62ca2bee6d810cade6de75e467393f7c 325 Gene3D G3DSA:3.40.250.10 188 320 5.9E-20 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS05655 50be4537a30a1a88b194b2fd32ac6ad8 319 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 40 313 1.9E-80 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS05655 50be4537a30a1a88b194b2fd32ac6ad8 319 PIRSF PIRSF017082 3 316 1.2E-74 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS05655 50be4537a30a1a88b194b2fd32ac6ad8 319 SUPERFAMILY SSF53850 101 279 3.29E-13 T 22-04-2016 PNUC_RS05655 50be4537a30a1a88b194b2fd32ac6ad8 319 PANTHER PTHR30349:SF16 7 286 6.6E-80 T 22-04-2016 PNUC_RS05655 50be4537a30a1a88b194b2fd32ac6ad8 319 PANTHER PTHR30349 7 286 6.6E-80 T 22-04-2016 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 SUPERFAMILY SSF52374 6 303 2.06E-103 T 22-04-2016 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 2.3E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 202 210 2.3E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 2.3E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 2.3E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 196 2.3E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 Gene3D G3DSA:1.10.10.350 376 466 3.1E-18 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 PANTHER PTHR11451 6 322 2.3E-88 T 22-04-2016 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 Gene3D G3DSA:3.90.800.10 71 187 2.3E-32 T 22-04-2016 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 PANTHER PTHR11451:SF41 6 322 2.3E-88 T 22-04-2016 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 Gene3D G3DSA:3.40.50.620 6 70 1.2E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 Gene3D G3DSA:3.40.50.620 188 237 1.2E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 Gene3D G3DSA:1.10.8.70 324 368 8.3E-5 T 22-04-2016 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 6 467 31.466 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 Gene3D G3DSA:1.10.1160.10 242 321 5.4E-31 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 312 4.2E-95 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 6 465 2.1E-164 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PNUC_RS04950 f779147237eab8b2d6112d48c168e982 468 SUPERFAMILY SSF48163 306 465 6.28E-38 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PNUC_RS06305 615872d884872186d301e7904c989a1e 380 PANTHER PTHR30482 133 371 4.5E-167 T 22-04-2016 PNUC_RS06305 615872d884872186d301e7904c989a1e 380 PANTHER PTHR30482 9 106 4.5E-167 T 22-04-2016 PNUC_RS06305 615872d884872186d301e7904c989a1e 380 PANTHER PTHR30482:SF4 133 371 4.5E-167 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC PNUC_RS06305 615872d884872186d301e7904c989a1e 380 PANTHER PTHR30482:SF4 9 106 4.5E-167 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC PNUC_RS06305 615872d884872186d301e7904c989a1e 380 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 55 368 1.0E-131 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC PNUC_RS06305 615872d884872186d301e7904c989a1e 380 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 357 1.7E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 PANTHER PTHR10836 1 340 7.0E-184 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 157 164 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 332 3.8E-125 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 159 5.9E-55 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 SMART SM00846 3 159 1.7E-87 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 Gene3D G3DSA:3.40.50.720 1 167 1.7E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.1E-36 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.1E-36 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.1E-36 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.1E-36 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.1E-36 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 PANTHER PTHR10836:SF50 1 340 7.0E-184 T 22-04-2016 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 321 1.0E-59 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 PIRSF PIRSF000149 1 342 6.3E-131 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 SUPERFAMILY SSF51735 1 178 1.75E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 Gene3D G3DSA:3.30.360.10 168 323 1.2E-69 T 22-04-2016 PNUC_RS01215 81a65e5654472699c8e3a68f8767e4f8 342 SUPERFAMILY SSF55347 159 322 6.55E-67 T 22-04-2016 PNUC_RS01025 c3a1e9bd2eedebf784a1992d73603d83 339 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 199 318 3.1E-26 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PNUC_RS01025 c3a1e9bd2eedebf784a1992d73603d83 339 Gene3D G3DSA:1.10.1040.10 199 324 6.4E-29 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PNUC_RS01025 c3a1e9bd2eedebf784a1992d73603d83 339 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 322 5.5E-55 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PNUC_RS01025 c3a1e9bd2eedebf784a1992d73603d83 339 Gene3D G3DSA:3.40.50.720 1 196 3.2E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01025 c3a1e9bd2eedebf784a1992d73603d83 339 SUPERFAMILY SSF51735 1 151 2.55E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01025 c3a1e9bd2eedebf784a1992d73603d83 339 PANTHER PTHR21708 1 124 1.7E-116 T 22-04-2016 PNUC_RS01025 c3a1e9bd2eedebf784a1992d73603d83 339 PANTHER PTHR21708 140 321 1.7E-116 T 22-04-2016 PNUC_RS01025 c3a1e9bd2eedebf784a1992d73603d83 339 PANTHER PTHR21708:SF29 1 124 1.7E-116 T 22-04-2016 PNUC_RS01025 c3a1e9bd2eedebf784a1992d73603d83 339 PANTHER PTHR21708:SF29 140 321 1.7E-116 T 22-04-2016 PNUC_RS01025 c3a1e9bd2eedebf784a1992d73603d83 339 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 173 1.6E-24 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PNUC_RS01025 c3a1e9bd2eedebf784a1992d73603d83 339 SUPERFAMILY SSF48179 199 320 7.14E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 5 448 2.0E-199 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 114 6.9E-48 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 SUPERFAMILY SSF52440 3 117 1.01E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 SMART SM00878 340 447 5.8E-63 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 Gene3D G3DSA:3.30.470.20 207 450 3.2E-103 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 SUPERFAMILY SSF51246 335 450 1.67E-43 T 22-04-2016 IPR011054 Rudiment single hybrid motif PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 Pfam PF02785 Biotin carboxylase C-terminal domain 340 447 3.2E-40 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 Gene3D G3DSA:3.40.50.20 5 132 3.9E-52 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 119 326 8.8E-80 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 Gene3D G3DSA:2.40.50.100 603 677 3.6E-23 T 22-04-2016 PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 Pfam PF00364 Biotin-requiring enzyme 612 676 4.3E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 SUPERFAMILY SSF56059 87 352 3.01E-67 T 22-04-2016 PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 PANTHER PTHR18866 4 678 0.0 T 22-04-2016 PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 SUPERFAMILY SSF51230 600 678 6.28E-21 T 22-04-2016 IPR011053 Single hybrid motif PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 634 651 - T 22-04-2016 IPR001882 Biotin-binding site PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 Gene3D G3DSA:3.30.1490.20 133 206 5.7E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS04755 c30ce82e8238888c33ff2c31bccaffaf 678 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 157 171 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS07890 582422fe2327dfe5d2950e14c5dcfae3 395 Gene3D G3DSA:1.25.40.10 189 270 4.5E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS07890 582422fe2327dfe5d2950e14c5dcfae3 395 Gene3D G3DSA:1.25.40.10 133 188 1.8E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS07890 582422fe2327dfe5d2950e14c5dcfae3 395 SUPERFAMILY SSF48452 146 256 2.76E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS07890 582422fe2327dfe5d2950e14c5dcfae3 395 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 114 1.7E-19 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI PNUC_RS06240 f5737e0ba44989a420ccd8f98a351568 256 Pfam PF00005 ABC transporter 26 164 1.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS06240 f5737e0ba44989a420ccd8f98a351568 256 SUPERFAMILY SSF52540 10 230 8.47E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06240 f5737e0ba44989a420ccd8f98a351568 256 Gene3D G3DSA:3.40.50.300 4 211 3.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06240 f5737e0ba44989a420ccd8f98a351568 256 PANTHER PTHR24220 11 210 1.4E-75 T 22-04-2016 PNUC_RS06240 f5737e0ba44989a420ccd8f98a351568 256 SMART SM00382 34 215 3.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS03790 ef3b9a17f8f5fe817676f6d0fe9b10d7 233 PIRSF PIRSF006232 1 230 1.2E-52 T 22-04-2016 IPR012093 Pirin PNUC_RS03790 ef3b9a17f8f5fe817676f6d0fe9b10d7 233 SUPERFAMILY SSF51182 1 231 1.07E-75 T 22-04-2016 IPR011051 RmlC-like cupin domain PNUC_RS03790 ef3b9a17f8f5fe817676f6d0fe9b10d7 233 Pfam PF02678 Pirin 11 119 1.3E-33 T 22-04-2016 IPR003829 Pirin, N-terminal domain PNUC_RS03790 ef3b9a17f8f5fe817676f6d0fe9b10d7 233 PANTHER PTHR13903:SF7 1 231 1.5E-107 T 22-04-2016 PNUC_RS03790 ef3b9a17f8f5fe817676f6d0fe9b10d7 233 Gene3D G3DSA:2.60.120.10 5 231 1.1E-71 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS03790 ef3b9a17f8f5fe817676f6d0fe9b10d7 233 PANTHER PTHR13903 1 231 1.5E-107 T 22-04-2016 IPR012093 Pirin PNUC_RS05680 4a2d49f062c802e8f7e3f0480f14b6df 533 SUPERFAMILY SSF52467 180 337 1.99E-53 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PNUC_RS05680 4a2d49f062c802e8f7e3f0480f14b6df 533 Gene3D G3DSA:3.40.50.970 2 170 8.6E-39 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS05680 4a2d49f062c802e8f7e3f0480f14b6df 533 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 319 4.6E-19 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PNUC_RS05680 4a2d49f062c802e8f7e3f0480f14b6df 533 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 522 7.6E-24 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PNUC_RS05680 4a2d49f062c802e8f7e3f0480f14b6df 533 PANTHER PTHR18968:SF133 3 524 2.5E-170 T 22-04-2016 PNUC_RS05680 4a2d49f062c802e8f7e3f0480f14b6df 533 PANTHER PTHR18968 3 524 2.5E-170 T 22-04-2016 PNUC_RS05680 4a2d49f062c802e8f7e3f0480f14b6df 533 Gene3D G3DSA:3.40.50.1220 178 331 8.4E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PNUC_RS05680 4a2d49f062c802e8f7e3f0480f14b6df 533 SUPERFAMILY SSF52518 3 172 1.62E-35 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS05680 4a2d49f062c802e8f7e3f0480f14b6df 533 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 168 1.8E-38 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PNUC_RS05680 4a2d49f062c802e8f7e3f0480f14b6df 533 SUPERFAMILY SSF52518 349 528 1.07E-37 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS05680 4a2d49f062c802e8f7e3f0480f14b6df 533 Gene3D G3DSA:3.40.50.970 332 529 1.8E-39 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS01435 e80ed9dc48b33667b4c7303b8bb2a69c 246 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 20 228 2.7E-61 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PNUC_RS01435 e80ed9dc48b33667b4c7303b8bb2a69c 246 Gene3D G3DSA:3.40.50.620 19 245 1.4E-75 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS01435 e80ed9dc48b33667b4c7303b8bb2a69c 246 Pfam PF06508 Queuosine biosynthesis protein QueC 20 235 3.9E-76 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PNUC_RS01435 e80ed9dc48b33667b4c7303b8bb2a69c 246 SUPERFAMILY SSF52402 19 244 5.95E-61 T 22-04-2016 PNUC_RS01435 e80ed9dc48b33667b4c7303b8bb2a69c 246 PANTHER PTHR11587:SF3 20 243 1.8E-99 T 22-04-2016 PNUC_RS01435 e80ed9dc48b33667b4c7303b8bb2a69c 246 PANTHER PTHR11587 20 243 1.8E-99 T 22-04-2016 PNUC_RS01435 e80ed9dc48b33667b4c7303b8bb2a69c 246 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 18 241 49.72 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PNUC_RS01435 e80ed9dc48b33667b4c7303b8bb2a69c 246 PIRSF PIRSF006293 17 246 3.8E-75 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 SUPERFAMILY SSF51735 9 157 3.94E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 Gene3D G3DSA:3.40.50.720 9 152 1.7E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 PIRSF PIRSF000148 6 385 2.8E-62 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 6 383 32.168 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 SUPERFAMILY SSF55347 144 370 2.07E-72 T 22-04-2016 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 PANTHER PTHR10174:SF116 211 385 1.8E-135 T 22-04-2016 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 PANTHER PTHR10174:SF116 139 189 1.8E-135 T 22-04-2016 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 277 291 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 Gene3D G3DSA:3.30.360.10 153 366 9.8E-70 T 22-04-2016 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 SMART SM00859 8 132 2.6E-28 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 132 1.7E-27 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 PANTHER PTHR10174 211 385 1.8E-135 T 22-04-2016 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 PANTHER PTHR10174 139 189 1.8E-135 T 22-04-2016 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 155 369 1.2E-49 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS04005 79b3eb15b6a8d51a914e918fb25fc2cc 385 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 9 383 1.9E-180 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PNUC_RS08545 cbc553b8c42dd1a6c53eb3578794350e 383 SUPERFAMILY SSF56796 4 382 4.06E-118 T 22-04-2016 PNUC_RS08545 cbc553b8c42dd1a6c53eb3578794350e 383 Gene3D G3DSA:3.40.50.1970 2 183 1.4E-54 T 22-04-2016 PNUC_RS08545 cbc553b8c42dd1a6c53eb3578794350e 383 PANTHER PTHR11496:SF68 1 382 3.0E-120 T 22-04-2016 PNUC_RS08545 cbc553b8c42dd1a6c53eb3578794350e 383 Gene3D G3DSA:1.20.1090.10 184 383 9.8E-63 T 22-04-2016 PNUC_RS08545 cbc553b8c42dd1a6c53eb3578794350e 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PNUC_RS08545 cbc553b8c42dd1a6c53eb3578794350e 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 374 4.6E-113 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PNUC_RS08545 cbc553b8c42dd1a6c53eb3578794350e 383 PANTHER PTHR11496 1 382 3.0E-120 T 22-04-2016 PNUC_RS02670 9465d59d6a17798cfafab7ebb70a115a 249 PIRSF PIRSF000090 1 249 8.5E-86 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PNUC_RS02670 9465d59d6a17798cfafab7ebb70a115a 249 SMART SM00893 23 211 2.9E-66 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PNUC_RS02670 9465d59d6a17798cfafab7ebb70a115a 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 PNUC_RS02670 9465d59d6a17798cfafab7ebb70a115a 249 PANTHER PTHR21294:SF8 1 249 3.1E-154 T 22-04-2016 PNUC_RS02670 9465d59d6a17798cfafab7ebb70a115a 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 1.1E-43 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PNUC_RS02670 9465d59d6a17798cfafab7ebb70a115a 249 PANTHER PTHR21294 1 249 3.1E-154 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PNUC_RS02670 9465d59d6a17798cfafab7ebb70a115a 249 Gene3D G3DSA:3.40.50.620 1 247 2.4E-104 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS02670 9465d59d6a17798cfafab7ebb70a115a 249 SUPERFAMILY SSF52402 1 242 1.19E-84 T 22-04-2016 PNUC_RS07625 b20da238ab3673715a249df23419eeed 275 SUPERFAMILY SSF51161 5 259 1.01E-71 T 22-04-2016 IPR011004 Trimeric LpxA-like PNUC_RS07625 b20da238ab3673715a249df23419eeed 275 PANTHER PTHR19136 16 274 1.3E-122 T 22-04-2016 PNUC_RS07625 b20da238ab3673715a249df23419eeed 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 6 71 1.7E-26 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PNUC_RS07625 b20da238ab3673715a249df23419eeed 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 275 56.123 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PNUC_RS07625 b20da238ab3673715a249df23419eeed 275 Gene3D G3DSA:2.160.10.10 92 258 8.5E-60 T 22-04-2016 PNUC_RS07625 b20da238ab3673715a249df23419eeed 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 169 4.4E-5 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS07625 b20da238ab3673715a249df23419eeed 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 6 274 7.5E-136 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PNUC_RS07625 b20da238ab3673715a249df23419eeed 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 137 165 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 PNUC_RS07625 b20da238ab3673715a249df23419eeed 275 PANTHER PTHR19136:SF52 16 274 1.3E-122 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PNUC_RS07625 b20da238ab3673715a249df23419eeed 275 Gene3D G3DSA:1.10.166.10 3 71 2.1E-29 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PNUC_RS07625 b20da238ab3673715a249df23419eeed 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 178 212 8.9E-14 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 6 657 51.108 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 Gene3D G3DSA:3.40.50.980 82 269 1.0E-39 T 22-04-2016 PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 264 275 - T 22-04-2016 IPR020845 AMP-binding, conserved site PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 Gene3D G3DSA:3.30.300.30 527 636 3.7E-26 T 22-04-2016 PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 PANTHER PTHR24095:SF178 5 653 8.2E-277 T 22-04-2016 PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 Pfam PF13193 AMP-binding enzyme C-terminal domain 541 622 4.3E-26 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 Gene3D G3DSA:2.30.38.10 447 526 2.3E-8 T 22-04-2016 PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 SUPERFAMILY SSF56801 12 653 2.49E-171 T 22-04-2016 PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 PANTHER PTHR24095 5 653 8.2E-277 T 22-04-2016 PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 29 84 2.4E-21 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 Gene3D G3DSA:3.40.50.980 270 432 9.0E-28 T 22-04-2016 PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 Pfam PF00501 AMP-binding enzyme 87 532 5.6E-90 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PNUC_RS05985 b190223ed77005580f8485b7cd183de7 657 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 26 655 9.0E-295 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 PNUC_RS10580 e9904b5249436383ac9c76dc8f68e3d4 132 SUPERFAMILY SSF161084 2 130 8.89E-29 T 22-04-2016 PNUC_RS10580 e9904b5249436383ac9c76dc8f68e3d4 132 PANTHER PTHR35814:SF2 1 132 8.4E-28 T 22-04-2016 PNUC_RS10580 e9904b5249436383ac9c76dc8f68e3d4 132 Pfam PF01124 MAPEG family 7 123 1.4E-25 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein PNUC_RS10580 e9904b5249436383ac9c76dc8f68e3d4 132 Gene3D G3DSA:1.20.120.550 5 131 2.5E-21 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain PNUC_RS10580 e9904b5249436383ac9c76dc8f68e3d4 132 PANTHER PTHR35814 1 132 8.4E-28 T 22-04-2016 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 SUPERFAMILY SSF54211 295 489 1.32E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Gene3D G3DSA:3.30.230.70 3 227 1.3E-80 T 22-04-2016 IPR027408 PNPase/RNase PH domain PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Gene3D G3DSA:3.30.230.70 316 543 2.2E-90 T 22-04-2016 IPR027408 PNPase/RNase PH domain PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Pfam PF03725 3' exoribonuclease family, domain 2 149 212 2.7E-11 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Pfam PF03725 3' exoribonuclease family, domain 2 462 530 7.4E-5 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 694 29.876 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 SUPERFAMILY SSF54791 556 641 1.02E-22 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 SUPERFAMILY SSF50249 621 697 1.56E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 SMART SM00316 621 691 2.5E-22 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 SMART SM00322 553 618 4.2E-15 T 22-04-2016 IPR004087 K Homology domain GO:0003676 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 692 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 SUPERFAMILY SSF54211 3 146 7.59E-50 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Gene3D G3DSA:3.30.1370.10 552 618 1.9E-26 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Gene3D G3DSA:1.10.10.400 228 315 3.8E-22 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 SUPERFAMILY SSF46915 241 322 7.06E-19 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Gene3D G3DSA:2.40.50.140 619 693 4.0E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 246 321 2.0E-19 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 PANTHER PTHR11252 3 697 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 SUPERFAMILY SSF55666 451 549 4.77E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 PANTHER PTHR11252:SF0 3 697 0.0 T 22-04-2016 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Pfam PF00013 KH domain 558 614 2.5E-11 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 SUPERFAMILY SSF55666 147 236 1.35E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 PIRSF PIRSF005499 3 717 3.5E-292 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 1.2E-22 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Pfam PF01138 3' exoribonuclease family, domain 1 17 146 3.4E-18 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 PNUC_RS05510 79dd92e1f7554fda58ff928f23441d8e 722 Pfam PF00575 S1 RNA binding domain 620 691 2.2E-13 T 22-04-2016 IPR003029 S1 domain GO:0003676 PNUC_RS00370 03b86c83225bde1801190fa192eff89d 102 Gene3D G3DSA:2.30.30.30 3 89 1.1E-17 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 PNUC_RS00370 03b86c83225bde1801190fa192eff89d 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 99 1.3E-29 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00370 03b86c83225bde1801190fa192eff89d 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 99 5.3E-20 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00370 03b86c83225bde1801190fa192eff89d 102 SUPERFAMILY SSF50104 3 97 1.76E-25 T 22-04-2016 IPR008991 Translation protein SH3-like domain PNUC_RS00370 03b86c83225bde1801190fa192eff89d 102 SMART SM00739 3 30 4.6E-4 T 22-04-2016 IPR005824 KOW PNUC_RS00370 03b86c83225bde1801190fa192eff89d 102 PANTHER PTHR12903 3 97 2.6E-30 T 22-04-2016 PNUC_RS00370 03b86c83225bde1801190fa192eff89d 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 94 17.763 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 SUPERFAMILY SSF53218 176 326 6.94E-40 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 251 284 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 Pfam PF03454 MoeA C-terminal region (domain IV) 338 403 1.1E-11 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 SUPERFAMILY SSF63882 1 174 1.57E-48 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 Pfam PF00994 Probable molybdopterin binding domain 180 321 2.1E-25 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 PANTHER PTHR10192 1 407 5.8E-136 T 22-04-2016 PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 SMART SM00852 178 323 7.7E-45 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 Pfam PF03453 MoeA N-terminal region (domain I and II) 4 165 3.4E-35 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 Gene3D G3DSA:3.90.105.10 130 160 4.2E-17 T 22-04-2016 PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 SUPERFAMILY SSF63867 334 404 3.14E-15 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 Gene3D G3DSA:2.170.190.11 45 129 7.0E-26 T 22-04-2016 PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 Gene3D G3DSA:3.40.980.10 161 333 1.1E-59 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02310 48704c6b5b8e3d34ae9101301e2dfd3d 408 Gene3D G3DSA:2.40.340.10 338 404 1.3E-9 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS08175 c7aa6a8574c0e855f90d67d5a5c8f654 258 Gene3D G3DSA:3.20.20.150 1 257 7.1E-92 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PNUC_RS08175 c7aa6a8574c0e855f90d67d5a5c8f654 258 Pfam PF01261 Xylose isomerase-like TIM barrel 23 219 2.1E-33 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PNUC_RS08175 c7aa6a8574c0e855f90d67d5a5c8f654 258 SUPERFAMILY SSF51658 1 258 2.88E-85 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PNUC_RS08175 c7aa6a8574c0e855f90d67d5a5c8f654 258 PIRSF PIRSF006241 1 258 1.2E-95 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 PNUC_RS08175 c7aa6a8574c0e855f90d67d5a5c8f654 258 PANTHER PTHR12110:SF12 1 258 1.2E-105 T 22-04-2016 PNUC_RS08175 c7aa6a8574c0e855f90d67d5a5c8f654 258 PANTHER PTHR12110 1 258 1.2E-105 T 22-04-2016 PNUC_RS04210 d203cbef46258e001e29f563c4d26980 318 Gene3D G3DSA:3.60.15.10 36 272 1.2E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS04210 d203cbef46258e001e29f563c4d26980 318 PANTHER PTHR11935:SF5 54 266 1.0E-42 T 22-04-2016 PNUC_RS04210 d203cbef46258e001e29f563c4d26980 318 SMART SM00849 61 247 8.7E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS04210 d203cbef46258e001e29f563c4d26980 318 Pfam PF00753 Metallo-beta-lactamase superfamily 60 247 5.6E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS04210 d203cbef46258e001e29f563c4d26980 318 SUPERFAMILY SSF56281 12 301 1.37E-59 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS04210 d203cbef46258e001e29f563c4d26980 318 PANTHER PTHR11935 54 266 1.0E-42 T 22-04-2016 PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 SMART SM00421 142 199 2.7E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 Gene3D G3DSA:3.40.50.2300 2 147 2.3E-26 T 22-04-2016 PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 Pfam PF00072 Response regulator receiver domain 5 115 6.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 PANTHER PTHR26402 3 198 5.0E-46 T 22-04-2016 PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 197 1.6E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 PANTHER PTHR26402:SF151 3 198 5.0E-46 T 22-04-2016 PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 SUPERFAMILY SSF52172 2 126 6.12E-26 T 22-04-2016 IPR011006 CheY-like superfamily PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 Gene3D G3DSA:1.10.10.10 148 203 1.1E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 SUPERFAMILY SSF46894 140 205 5.78E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 SMART SM00448 3 116 2.6E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 2.5E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 2.5E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS09385 c16f7326608f09c0e029709b7c32fcc0 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 2.5E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS09970 05dff5babcb67bc28f3466f24c5d28a4 88 Pfam PF00037 4Fe-4S binding domain 5 25 2.8E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS09970 05dff5babcb67bc28f3466f24c5d28a4 88 SUPERFAMILY SSF54862 5 74 7.82E-19 T 22-04-2016 PNUC_RS09970 05dff5babcb67bc28f3466f24c5d28a4 88 PANTHER PTHR24960:SF38 1 77 1.1E-25 T 22-04-2016 PNUC_RS09970 05dff5babcb67bc28f3466f24c5d28a4 88 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS09970 05dff5babcb67bc28f3466f24c5d28a4 88 Gene3D G3DSA:3.30.70.20 4 76 5.8E-18 T 22-04-2016 PNUC_RS09970 05dff5babcb67bc28f3466f24c5d28a4 88 PANTHER PTHR24960 1 77 1.1E-25 T 22-04-2016 PNUC_RS02485 8ecfe25125dc64a3b5b0e325de98fad3 220 PANTHER PTHR22939:SF104 36 205 2.6E-36 T 22-04-2016 PNUC_RS02485 8ecfe25125dc64a3b5b0e325de98fad3 220 PANTHER PTHR22939 36 205 2.6E-36 T 22-04-2016 PNUC_RS07575 fba5ed8eee5fc14347bc67a36132cc43 186 Pfam PF01765 Ribosome recycling factor 21 184 3.7E-61 T 22-04-2016 IPR023584 Ribosome recycling factor domain PNUC_RS07575 fba5ed8eee5fc14347bc67a36132cc43 186 PANTHER PTHR20982 5 186 3.5E-74 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 PNUC_RS07575 fba5ed8eee5fc14347bc67a36132cc43 186 SUPERFAMILY SSF55194 6 185 7.46E-69 T 22-04-2016 IPR023584 Ribosome recycling factor domain PNUC_RS07575 fba5ed8eee5fc14347bc67a36132cc43 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 27.142 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 PNUC_RS07575 fba5ed8eee5fc14347bc67a36132cc43 186 Gene3D G3DSA:1.10.132.20 68 186 9.4E-43 T 22-04-2016 IPR023584 Ribosome recycling factor domain PNUC_RS07575 fba5ed8eee5fc14347bc67a36132cc43 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 1.8E-70 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 PNUC_RS05030 24793e827dfaf66d9360810f1dcc5cae 236 SMART SM00248 61 91 760.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 PNUC_RS05030 24793e827dfaf66d9360810f1dcc5cae 236 SMART SM00248 159 188 1.3E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 PNUC_RS05030 24793e827dfaf66d9360810f1dcc5cae 236 SMART SM00248 95 125 0.64 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 PNUC_RS05030 24793e827dfaf66d9360810f1dcc5cae 236 SMART SM00248 28 57 340.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 PNUC_RS05030 24793e827dfaf66d9360810f1dcc5cae 236 SMART SM00248 126 155 8.2E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 PNUC_RS05030 24793e827dfaf66d9360810f1dcc5cae 236 PRINTS PR01415 Ankyrin repeat signature 127 142 5.63E-8 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 PNUC_RS05030 24793e827dfaf66d9360810f1dcc5cae 236 PRINTS PR01415 Ankyrin repeat signature 175 189 5.63E-8 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 PNUC_RS05030 24793e827dfaf66d9360810f1dcc5cae 236 PANTHER PTHR24198 8 200 2.9E-47 T 22-04-2016 PNUC_RS05030 24793e827dfaf66d9360810f1dcc5cae 236 Pfam PF12796 Ankyrin repeats (3 copies) 106 190 6.4E-18 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain PNUC_RS05030 24793e827dfaf66d9360810f1dcc5cae 236 Pfam PF13637 Ankyrin repeats (many copies) 35 82 5.4E-5 T 22-04-2016 PNUC_RS05030 24793e827dfaf66d9360810f1dcc5cae 236 SUPERFAMILY SSF48403 11 209 3.15E-45 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain PNUC_RS05030 24793e827dfaf66d9360810f1dcc5cae 236 Gene3D G3DSA:1.25.40.20 11 215 6.0E-47 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain PNUC_RS06350 2c175a26ae57e7dea6bc2d7cbe5e3b53 127 SUPERFAMILY SSF53137 4 113 3.2E-14 T 22-04-2016 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 Gene3D G3DSA:3.40.50.300 419 577 3.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 Pfam PF00009 Elongation factor Tu GTP binding domain 423 578 4.3E-36 T 22-04-2016 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 SUPERFAMILY SSF52156 703 827 1.26E-36 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 SUPERFAMILY SSF46955 3 50 2.2E-9 T 22-04-2016 IPR009061 Putative DNA-binding domain PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 PANTHER PTHR23115:SF184 773 920 2.1E-199 T 22-04-2016 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 PANTHER PTHR23115:SF184 401 748 2.1E-199 T 22-04-2016 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 99 9.9E-13 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 SUPERFAMILY SSF52540 415 589 2.22E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 Gene3D G3DSA:2.40.30.10 822 918 8.1E-36 T 22-04-2016 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 421 577 2.1E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 338 919 2.5E-252 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 Gene3D G3DSA:3.30.56.50 3 50 8.2E-17 T 22-04-2016 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 Gene3D G3DSA:3.40.50.10050 721 799 3.0E-26 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 Gene3D G3DSA:2.40.30.10 590 683 9.1E-25 T 22-04-2016 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 SUPERFAMILY SSF50447 591 673 2.08E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 SUPERFAMILY SSF50447 822 918 8.25E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 ProSitePatterns PS01176 Initiation factor 2 signature. 871 893 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 PANTHER PTHR23115 773 920 2.1E-199 T 22-04-2016 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 PANTHER PTHR23115 401 748 2.1E-199 T 22-04-2016 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 Pfam PF11987 Translation-initiation factor 2 704 810 4.1E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 343 393 1.6E-14 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 3 51 3.9E-7 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal PNUC_RS06445 dfe30608a305123597dbcf208191a301 920 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 918 17.284 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 PNUC_RS06720 9f3263f36debf2e3375f9fff0d7ccbe6 446 Gene3D G3DSA:3.40.440.10 11 101 1.4E-70 T 22-04-2016 PNUC_RS06720 9f3263f36debf2e3375f9fff0d7ccbe6 446 Gene3D G3DSA:3.40.440.10 204 273 1.4E-70 T 22-04-2016 PNUC_RS06720 9f3263f36debf2e3375f9fff0d7ccbe6 446 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 18 25 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PNUC_RS06720 9f3263f36debf2e3375f9fff0d7ccbe6 446 Gene3D G3DSA:3.90.170.10 274 440 1.9E-62 T 22-04-2016 PNUC_RS06720 9f3263f36debf2e3375f9fff0d7ccbe6 446 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 13 444 1.4E-174 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PNUC_RS06720 9f3263f36debf2e3375f9fff0d7ccbe6 446 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 446 210.994 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PNUC_RS06720 9f3263f36debf2e3375f9fff0d7ccbe6 446 SMART SM00788 11 439 1.1E-291 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PNUC_RS06720 9f3263f36debf2e3375f9fff0d7ccbe6 446 SUPERFAMILY SSF52540 11 445 2.23E-171 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06720 9f3263f36debf2e3375f9fff0d7ccbe6 446 PANTHER PTHR11846 9 443 5.3E-233 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PNUC_RS06720 9f3263f36debf2e3375f9fff0d7ccbe6 446 Pfam PF00709 Adenylosuccinate synthetase 12 438 2.8E-173 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PNUC_RS06720 9f3263f36debf2e3375f9fff0d7ccbe6 446 Gene3D G3DSA:1.10.300.10 111 203 1.1E-38 T 22-04-2016 PNUC_RS06720 9f3263f36debf2e3375f9fff0d7ccbe6 446 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 140 151 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 PNUC_RS03010 28a51023f62808fc72db81f5cb607a61 260 Pfam PF14023 Protein of unknown function (DUF4239) 55 248 1.5E-12 T 22-04-2016 IPR025333 Protein of unknown function DUF4239 PNUC_RS10440 6b3b2d8fa588b945bb6d752dd1a0007d 489 PANTHER PTHR11659:SF0 2 488 1.4E-242 T 22-04-2016 PNUC_RS10440 6b3b2d8fa588b945bb6d752dd1a0007d 489 SMART SM00845 333 488 2.3E-68 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 PNUC_RS10440 6b3b2d8fa588b945bb6d752dd1a0007d 489 SUPERFAMILY SSF55931 4 301 1.57E-121 T 22-04-2016 PNUC_RS10440 6b3b2d8fa588b945bb6d752dd1a0007d 489 PANTHER PTHR11659 2 488 1.4E-242 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 PNUC_RS10440 6b3b2d8fa588b945bb6d752dd1a0007d 489 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 488 6.1E-169 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 PNUC_RS10440 6b3b2d8fa588b945bb6d752dd1a0007d 489 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 489 37.303 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 PNUC_RS10440 6b3b2d8fa588b945bb6d752dd1a0007d 489 Pfam PF02934 GatB/GatE catalytic domain 5 294 9.6E-113 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 PNUC_RS10440 6b3b2d8fa588b945bb6d752dd1a0007d 489 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 149 163 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 PNUC_RS10440 6b3b2d8fa588b945bb6d752dd1a0007d 489 Gene3D G3DSA:1.10.10.410 433 488 7.2E-5 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal PNUC_RS10440 6b3b2d8fa588b945bb6d752dd1a0007d 489 Pfam PF02637 GatB domain 334 488 4.3E-46 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 PNUC_RS10440 6b3b2d8fa588b945bb6d752dd1a0007d 489 SUPERFAMILY SSF89095 303 406 1.57E-25 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 PNUC_RS06540 91c91acd7e9b7fb2d4820909402333e4 417 Gene3D G3DSA:2.120.10.10 71 395 1.1E-28 T 22-04-2016 IPR011040 Sialidases PNUC_RS06540 91c91acd7e9b7fb2d4820909402333e4 417 PANTHER PTHR33307:SF3 57 388 4.2E-23 T 22-04-2016 PNUC_RS06540 91c91acd7e9b7fb2d4820909402333e4 417 SUPERFAMILY SSF50939 69 394 4.49E-36 T 22-04-2016 IPR011040 Sialidases PNUC_RS06540 91c91acd7e9b7fb2d4820909402333e4 417 PANTHER PTHR33307 57 388 4.2E-23 T 22-04-2016 PNUC_RS06540 91c91acd7e9b7fb2d4820909402333e4 417 Pfam PF13088 BNR repeat-like domain 89 373 3.9E-73 T 22-04-2016 IPR011040 Sialidases PNUC_RS10335 c81871c4d33719f49b658e12b8938c72 376 Gene3D G3DSA:3.30.460.10 1 127 7.5E-28 T 22-04-2016 PNUC_RS10335 c81871c4d33719f49b658e12b8938c72 376 SUPERFAMILY SSF81891 128 346 5.49E-30 T 22-04-2016 PNUC_RS10335 c81871c4d33719f49b658e12b8938c72 376 Gene3D G3DSA:1.10.3090.10 128 287 2.3E-25 T 22-04-2016 PNUC_RS10335 c81871c4d33719f49b658e12b8938c72 376 Pfam PF01743 Poly A polymerase head domain 3 127 1.3E-14 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 PNUC_RS10335 c81871c4d33719f49b658e12b8938c72 376 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 154 214 1.0E-7 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PNUC_RS10335 c81871c4d33719f49b658e12b8938c72 376 SUPERFAMILY SSF81301 1 125 7.85E-28 T 22-04-2016 PNUC_RS10335 c81871c4d33719f49b658e12b8938c72 376 PANTHER PTHR13734 1 212 2.5E-54 T 22-04-2016 PNUC_RS05065 9b3c69fe59eb7edff1e629fcae380c00 160 Pfam PF03061 Thioesterase superfamily 56 130 2.8E-11 T 22-04-2016 IPR006683 Thioesterase domain PNUC_RS05065 9b3c69fe59eb7edff1e629fcae380c00 160 Gene3D G3DSA:3.10.129.10 6 140 1.1E-30 T 22-04-2016 IPR029069 HotDog domain PNUC_RS05065 9b3c69fe59eb7edff1e629fcae380c00 160 SUPERFAMILY SSF54637 20 140 3.1E-27 T 22-04-2016 IPR029069 HotDog domain PNUC_RS05065 9b3c69fe59eb7edff1e629fcae380c00 160 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 24 136 2.6E-18 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain PNUC_RS05065 9b3c69fe59eb7edff1e629fcae380c00 160 PANTHER PTHR12418 21 152 8.9E-21 T 22-04-2016 PNUC_RS09255 096debc21a4b5f398dc84bb659fecaa7 381 PANTHER PTHR11748 12 380 1.3E-59 T 22-04-2016 PNUC_RS09255 096debc21a4b5f398dc84bb659fecaa7 381 Pfam PF01565 FAD binding domain 18 132 1.8E-16 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PNUC_RS09255 096debc21a4b5f398dc84bb659fecaa7 381 SUPERFAMILY SSF56176 18 174 8.88E-27 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PNUC_RS09255 096debc21a4b5f398dc84bb659fecaa7 381 Gene3D G3DSA:3.30.465.10 53 174 1.2E-18 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PNUC_RS09255 096debc21a4b5f398dc84bb659fecaa7 381 PANTHER PTHR11748:SF1 12 380 1.3E-59 T 22-04-2016 PNUC_RS09255 096debc21a4b5f398dc84bb659fecaa7 381 SUPERFAMILY SSF55103 133 300 6.54E-7 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PNUC_RS04750 3fec83fb6616f71bbeca230981938bac 510 SUPERFAMILY SSF52096 223 510 3.73E-89 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS04750 3fec83fb6616f71bbeca230981938bac 510 PANTHER PTHR22855:SF40 1 510 0.0 T 22-04-2016 PNUC_RS04750 3fec83fb6616f71bbeca230981938bac 510 SUPERFAMILY SSF52096 3 254 6.59E-82 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS04750 3fec83fb6616f71bbeca230981938bac 510 Pfam PF01039 Carboxyl transferase domain 27 508 1.4E-195 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04750 3fec83fb6616f71bbeca230981938bac 510 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 180 3.0E-5 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04750 3fec83fb6616f71bbeca230981938bac 510 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 145 3.0E-5 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04750 3fec83fb6616f71bbeca230981938bac 510 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 93 107 3.0E-5 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04750 3fec83fb6616f71bbeca230981938bac 510 Gene3D G3DSA:3.90.226.10 2 254 3.2E-87 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS04750 3fec83fb6616f71bbeca230981938bac 510 Gene3D G3DSA:3.90.226.10 269 510 7.9E-98 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS04750 3fec83fb6616f71bbeca230981938bac 510 PANTHER PTHR22855 1 510 0.0 T 22-04-2016 PNUC_RS08860 89a6f2157dc3ec02b5db78daf0ee6cd1 275 TIGRFAM TIGR00294 TIGR00294: GTP cyclohydrolase 26 270 9.1E-32 T 22-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PNUC_RS08860 89a6f2157dc3ec02b5db78daf0ee6cd1 275 Gene3D G3DSA:3.10.270.10 13 272 2.5E-94 T 22-04-2016 PNUC_RS08860 89a6f2157dc3ec02b5db78daf0ee6cd1 275 Pfam PF02649 Type I GTP cyclohydrolase folE2 14 269 1.0E-86 T 22-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PNUC_RS08860 89a6f2157dc3ec02b5db78daf0ee6cd1 275 PANTHER PTHR36445:SF1 9 271 4.7E-68 T 22-04-2016 PNUC_RS08860 89a6f2157dc3ec02b5db78daf0ee6cd1 275 PANTHER PTHR36445 9 271 4.7E-68 T 22-04-2016 PNUC_RS08860 89a6f2157dc3ec02b5db78daf0ee6cd1 275 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 14 274 35.294 T 22-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PNUC_RS04255 3c86061b0bcb2697213a275d98b13ba6 392 PANTHER PTHR10909 1 392 2.9E-265 T 22-04-2016 PNUC_RS04255 3c86061b0bcb2697213a275d98b13ba6 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 384 1.2E-28 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PNUC_RS04255 3c86061b0bcb2697213a275d98b13ba6 392 Gene3D G3DSA:1.20.140.10 239 389 3.4E-43 T 22-04-2016 PNUC_RS04255 3c86061b0bcb2697213a275d98b13ba6 392 SUPERFAMILY SSF56645 6 237 8.9E-75 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PNUC_RS04255 3c86061b0bcb2697213a275d98b13ba6 392 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PNUC_RS04255 3c86061b0bcb2697213a275d98b13ba6 392 PANTHER PTHR10909:SF307 1 392 2.9E-265 T 22-04-2016 PNUC_RS04255 3c86061b0bcb2697213a275d98b13ba6 392 Gene3D G3DSA:2.40.110.10 134 234 2.0E-29 T 22-04-2016 PNUC_RS04255 3c86061b0bcb2697213a275d98b13ba6 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 226 2.8E-17 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PNUC_RS04255 3c86061b0bcb2697213a275d98b13ba6 392 Gene3D G3DSA:1.10.540.10 4 133 3.4E-43 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PNUC_RS04255 3c86061b0bcb2697213a275d98b13ba6 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 131 1.5E-35 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PNUC_RS04255 3c86061b0bcb2697213a275d98b13ba6 392 SUPERFAMILY SSF47203 241 389 2.58E-43 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PNUC_RS09180 89594cdd988b158a07b7c93371ad682b 272 PANTHER PTHR20881 7 271 3.6E-136 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PNUC_RS09180 89594cdd988b158a07b7c93371ad682b 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 270 40.518 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PNUC_RS09180 89594cdd988b158a07b7c93371ad682b 272 SUPERFAMILY SSF51621 10 270 1.65E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS09180 89594cdd988b158a07b7c93371ad682b 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 265 7.8E-106 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PNUC_RS09180 89594cdd988b158a07b7c93371ad682b 272 Gene3D G3DSA:3.20.20.60 8 270 4.1E-108 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS09180 89594cdd988b158a07b7c93371ad682b 272 PIRSF PIRSF000388 2 271 1.2E-97 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PNUC_RS09180 89594cdd988b158a07b7c93371ad682b 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 11 268 6.3E-97 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PNUC_RS03760 483df663700498b2f7a49d2e0d0de136 214 Pfam PF03922 OmpW family 33 214 2.2E-42 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 PNUC_RS03760 483df663700498b2f7a49d2e0d0de136 214 SUPERFAMILY SSF56925 31 214 1.02E-24 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PNUC_RS03760 483df663700498b2f7a49d2e0d0de136 214 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 122 196 2.1E-4 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 PNUC_RS03760 483df663700498b2f7a49d2e0d0de136 214 Gene3D G3DSA:2.40.160.20 31 214 2.0E-49 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PNUC_RS03760 483df663700498b2f7a49d2e0d0de136 214 PANTHER PTHR36920:SF1 3 214 8.0E-46 T 22-04-2016 PNUC_RS03760 483df663700498b2f7a49d2e0d0de136 214 PANTHER PTHR36920 3 214 8.0E-46 T 22-04-2016 PNUC_RS10055 30084e13e6556181f33369b579646644 385 Gene3D G3DSA:1.10.760.10 299 372 9.2E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS10055 30084e13e6556181f33369b579646644 385 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 43 266 3.6E-58 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 PNUC_RS10055 30084e13e6556181f33369b579646644 385 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 202 250 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 PNUC_RS10055 30084e13e6556181f33369b579646644 385 PANTHER PTHR22888:SF2 37 310 9.7E-92 T 22-04-2016 PNUC_RS10055 30084e13e6556181f33369b579646644 385 Gene3D G3DSA:1.10.287.90 35 121 4.6E-26 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PNUC_RS10055 30084e13e6556181f33369b579646644 385 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 290 360 3.5E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS10055 30084e13e6556181f33369b579646644 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 93 105 1.7E-38 T 22-04-2016 PNUC_RS10055 30084e13e6556181f33369b579646644 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 177 198 1.7E-38 T 22-04-2016 PNUC_RS10055 30084e13e6556181f33369b579646644 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 201 221 1.7E-38 T 22-04-2016 PNUC_RS10055 30084e13e6556181f33369b579646644 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 239 256 1.7E-38 T 22-04-2016 PNUC_RS10055 30084e13e6556181f33369b579646644 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 105 125 1.7E-38 T 22-04-2016 PNUC_RS10055 30084e13e6556181f33369b579646644 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 127 146 1.7E-38 T 22-04-2016 PNUC_RS10055 30084e13e6556181f33369b579646644 385 SUPERFAMILY SSF46626 236 370 5.93E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS10055 30084e13e6556181f33369b579646644 385 PANTHER PTHR22888 37 310 9.7E-92 T 22-04-2016 PNUC_RS10055 30084e13e6556181f33369b579646644 385 SUPERFAMILY SSF49503 128 271 4.93E-52 T 22-04-2016 IPR008972 Cupredoxin PNUC_RS10055 30084e13e6556181f33369b579646644 385 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 35 116 2.2E-15 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PNUC_RS10055 30084e13e6556181f33369b579646644 385 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 131 257 4.1E-38 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 PNUC_RS10055 30084e13e6556181f33369b579646644 385 SUPERFAMILY SSF81464 32 125 4.91E-27 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PNUC_RS10055 30084e13e6556181f33369b579646644 385 Gene3D G3DSA:2.60.40.420 122 298 1.4E-57 T 22-04-2016 IPR008972 Cupredoxin PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 10 314 5.4E-114 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 Gene3D G3DSA:3.50.50.60 6 120 2.3E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 Gene3D G3DSA:3.50.50.60 122 233 1.1E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PANTHER PTHR22912 1 315 7.3E-150 T 22-04-2016 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 138 158 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 SUPERFAMILY SSF51905 2 314 1.04E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 1.72E-38 T 22-04-2016 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.72E-38 T 22-04-2016 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 1.72E-38 T 22-04-2016 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 1.72E-38 T 22-04-2016 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 1.72E-38 T 22-04-2016 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 302 1.0E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 Gene3D G3DSA:3.50.50.60 234 315 2.0E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 43 58 1.01E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 1.01E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 1.01E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 201 217 1.01E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 64 74 1.01E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 1.01E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 143 1.01E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 10 32 1.01E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 1.01E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS03595 c192cc83fe7e3d440dc62039bc78e488 318 PANTHER PTHR22912:SF48 1 315 7.3E-150 T 22-04-2016 PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 SUPERFAMILY SSF56300 40 62 1.79E-73 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 SUPERFAMILY SSF56300 116 381 1.79E-73 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 PRINTS PR01607 Apyrase family signature 287 310 1.7E-8 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 PRINTS PR01607 Apyrase family signature 319 339 1.7E-8 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 PRINTS PR01607 Apyrase family signature 268 285 1.7E-8 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 PRINTS PR01607 Apyrase family signature 43 61 1.7E-8 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 SUPERFAMILY SSF55816 379 564 4.58E-30 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 PANTHER PTHR11575:SF16 21 523 7.6E-171 T 22-04-2016 PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 Gene3D G3DSA:3.90.780.10 398 523 2.0E-16 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 4 566 7.7E-264 T 22-04-2016 IPR030998 Thiosulfohydrolase SoxB PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 26 9.3E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 Pfam PF02872 5'-nucleotidase, C-terminal domain 398 523 1.6E-15 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 Gene3D G3DSA:3.60.21.10 116 381 2.5E-74 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 Gene3D G3DSA:3.60.21.10 42 62 2.5E-74 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS04200 03896397baabc9a00c35dfbb649bc1d9 576 PANTHER PTHR11575 21 523 7.6E-171 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 PNUC_RS05075 ea1547d3a7ae08d3392a550df6e282b5 134 Pfam PF01641 SelR domain 7 126 8.4E-53 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PNUC_RS05075 ea1547d3a7ae08d3392a550df6e282b5 134 SUPERFAMILY SSF51316 2 129 1.1E-58 T 22-04-2016 IPR011057 Mss4-like PNUC_RS05075 ea1547d3a7ae08d3392a550df6e282b5 134 Gene3D G3DSA:2.170.150.20 1 130 4.5E-60 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PNUC_RS05075 ea1547d3a7ae08d3392a550df6e282b5 134 PANTHER PTHR10173:SF18 1 130 1.6E-58 T 22-04-2016 PNUC_RS05075 ea1547d3a7ae08d3392a550df6e282b5 134 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 1 127 37.465 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PNUC_RS05075 ea1547d3a7ae08d3392a550df6e282b5 134 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 2 130 1.3E-56 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PNUC_RS05075 ea1547d3a7ae08d3392a550df6e282b5 134 PANTHER PTHR10173 1 130 1.6E-58 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 PANTHER PTHR11751:SF406 521 529 5.6E-141 T 22-04-2016 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 PANTHER PTHR11751:SF406 549 669 5.6E-141 T 22-04-2016 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 PANTHER PTHR11751:SF406 152 493 5.6E-141 T 22-04-2016 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 Gene3D G3DSA:3.90.1150.10 458 625 8.9E-69 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 PANTHER PTHR11751 521 529 5.6E-141 T 22-04-2016 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 PANTHER PTHR11751 549 669 5.6E-141 T 22-04-2016 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 PANTHER PTHR11751 152 493 5.6E-141 T 22-04-2016 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 609 733 8.5E-48 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 SUPERFAMILY SSF55904 603 750 1.29E-45 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 145 2.8E-38 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 151 582 7.3E-150 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 Gene3D G3DSA:3.40.640.10 151 455 4.5E-109 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 SUPERFAMILY SSF53383 151 601 7.86E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 391 405 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 Gene3D G3DSA:3.90.100.10 626 750 1.7E-35 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PNUC_RS03395 810fc6c0c093726e76668d99f56eb7bb 755 PIRSF PIRSF009393 1 750 1.8E-279 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Pfam PF04561 RNA polymerase Rpb2, domain 2 353 458 2.1E-14 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Pfam PF04561 RNA polymerase Rpb2, domain 2 154 226 3.6E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Pfam PF04560 RNA polymerase Rpb2, domain 7 1290 1364 1.8E-26 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1362 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1080 1092 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Pfam PF04565 RNA polymerase Rpb2, domain 3 517 584 2.9E-31 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Pfam PF10385 RNA polymerase beta subunit external 1 domain 595 660 1.6E-23 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Gene3D G3DSA:2.40.50.150 832 941 2.9E-56 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Gene3D G3DSA:2.40.50.150 1062 1076 2.9E-56 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Pfam PF00562 RNA polymerase Rpb2, domain 6 722 1288 4.0E-158 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Pfam PF04563 RNA polymerase beta subunit 26 504 4.5E-38 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Gene3D G3DSA:2.40.270.10 797 824 1.8E-85 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Gene3D G3DSA:2.40.270.10 1077 1266 1.8E-85 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 SUPERFAMILY SSF64484 347 943 0.0 T 22-04-2016 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 SUPERFAMILY SSF64484 13 229 0.0 T 22-04-2016 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 SUPERFAMILY SSF64484 1056 1364 0.0 T 22-04-2016 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Gene3D G3DSA:2.30.150.10 596 660 5.8E-26 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Gene3D G3DSA:3.90.1100.10 663 717 1.3E-143 T 22-04-2016 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Gene3D G3DSA:3.90.1100.10 22 154 1.3E-143 T 22-04-2016 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Gene3D G3DSA:3.90.1100.10 449 595 1.3E-143 T 22-04-2016 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 PANTHER PTHR20856 1051 1145 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 PANTHER PTHR20856 1196 1366 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 PANTHER PTHR20856 5 233 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 PANTHER PTHR20856 344 729 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 PANTHER PTHR20856 747 934 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Gene3D G3DSA:3.90.1110.10 156 233 3.4E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Gene3D G3DSA:3.90.1110.10 350 448 3.4E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1366 12.191 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 PANTHER PTHR20856:SF20 1051 1145 0.0 T 22-04-2016 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 PANTHER PTHR20856:SF20 1196 1366 0.0 T 22-04-2016 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 PANTHER PTHR20856:SF20 5 233 0.0 T 22-04-2016 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 PANTHER PTHR20856:SF20 344 729 0.0 T 22-04-2016 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 PANTHER PTHR20856:SF20 747 934 0.0 T 22-04-2016 PNUC_RS00280 f342fe7875663186e272fce2bd5fbc0e 1366 Gene3D G3DSA:2.40.50.100 719 796 7.1E-29 T 22-04-2016 PNUC_RS01085 0446903a26f5475f7a9a9135fe44b25c 225 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 59 199 6.0E-14 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PNUC_RS01085 0446903a26f5475f7a9a9135fe44b25c 225 PANTHER PTHR30417 33 210 8.8E-56 T 22-04-2016 PNUC_RS01085 0446903a26f5475f7a9a9135fe44b25c 225 Gene3D G3DSA:3.40.80.10 35 210 9.1E-58 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PNUC_RS01085 0446903a26f5475f7a9a9135fe44b25c 225 PANTHER PTHR30417:SF4 33 210 8.8E-56 T 22-04-2016 PNUC_RS01085 0446903a26f5475f7a9a9135fe44b25c 225 SUPERFAMILY SSF55846 35 211 1.02E-52 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PNUC_RS01085 0446903a26f5475f7a9a9135fe44b25c 225 SMART SM00644 47 199 2.7E-29 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 678 686 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 Gene3D G3DSA:3.30.230.10 593 773 4.3E-74 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 TIGRFAM TIGR00763 lon: endopeptidase La 15 773 3.6E-293 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 SMART SM00382 350 494 1.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 SUPERFAMILY SSF52540 314 588 2.65E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 728 746 1.2E-54 T 22-04-2016 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 597 613 1.2E-54 T 22-04-2016 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 675 694 1.2E-54 T 22-04-2016 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 1.2E-54 T 22-04-2016 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 1.2E-54 T 22-04-2016 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 Hamap MF_01973 Lon protease [lon]. 14 774 69.976 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 14 200 1.3E-43 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 Gene3D G3DSA:1.10.8.60 493 585 4.4E-32 T 22-04-2016 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 490 9.4E-16 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 PANTHER PTHR10046:SF43 11 778 0.0 T 22-04-2016 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 PANTHER PTHR10046 11 778 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 SUPERFAMILY SSF88697 13 204 1.19E-51 T 22-04-2016 IPR015947 PUA-like domain PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 PIRSF PIRSF001174 6 777 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 Gene3D G3DSA:3.40.50.300 315 490 5.2E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 SMART SM00464 13 205 2.8E-69 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 SUPERFAMILY SSF54211 597 772 1.52E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS04875 bf97abf39db5516a4a8105456cdf4728 810 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 572 774 2.1E-92 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 SUPERFAMILY SSF50249 189 275 1.03E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 SUPERFAMILY SSF50249 429 529 1.65E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 SUPERFAMILY SSF50249 347 437 4.74E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.6E-202 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 PANTHER PTHR10724:SF6 1 514 1.5E-240 T 22-04-2016 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 Gene3D G3DSA:2.40.50.140 282 360 4.9E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 Gene3D G3DSA:2.40.50.140 21 99 1.2E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 Gene3D G3DSA:2.40.50.140 361 442 1.2E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 PIRSF PIRSF002111 1 534 2.3E-209 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 SUPERFAMILY SSF50249 104 184 2.69E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 PANTHER PTHR10724 1 514 1.5E-240 T 22-04-2016 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 SMART SM00316 449 520 2.9E-19 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 SMART SM00316 103 171 1.3E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 SMART SM00316 19 87 0.0065 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 SMART SM00316 275 347 5.8E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 SMART SM00316 362 434 4.8E-22 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 SMART SM00316 190 260 1.6E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 SUPERFAMILY SSF50249 255 362 2.86E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 Gene3D G3DSA:2.40.50.140 448 521 3.2E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 Gene3D G3DSA:2.40.50.140 100 172 6.8E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 Gene3D G3DSA:2.40.50.140 184 262 6.0E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 4.0E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 4.0E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 4.0E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 4.0E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 4.0E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 4.0E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 4.0E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 4.0E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 4.0E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 Pfam PF00575 S1 RNA binding domain 19 85 1.5E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 Pfam PF00575 S1 RNA binding domain 361 434 1.2E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 Pfam PF00575 S1 RNA binding domain 450 520 2.7E-12 T 22-04-2016 IPR003029 S1 domain GO:0003676 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 Pfam PF00575 S1 RNA binding domain 190 260 4.8E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 Pfam PF00575 S1 RNA binding domain 103 171 2.0E-12 T 22-04-2016 IPR003029 S1 domain GO:0003676 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 Pfam PF00575 S1 RNA binding domain 277 347 2.5E-17 T 22-04-2016 IPR003029 S1 domain GO:0003676 PNUC_RS02610 c39539578667a98e3ec55fcbc4c08ecd 557 SUPERFAMILY SSF50249 1 113 5.07E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS04055 5aa8645fe47ae17d9a56da7f6e047188 512 Gene3D G3DSA:3.60.20.10 2 260 2.7E-57 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS04055 5aa8645fe47ae17d9a56da7f6e047188 512 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 3.9E-154 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 PNUC_RS04055 5aa8645fe47ae17d9a56da7f6e047188 512 Pfam PF00156 Phosphoribosyl transferase domain 282 395 3.4E-10 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PNUC_RS04055 5aa8645fe47ae17d9a56da7f6e047188 512 SUPERFAMILY SSF56235 2 259 3.35E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS04055 5aa8645fe47ae17d9a56da7f6e047188 512 Pfam PF13537 Glutamine amidotransferase domain 81 214 4.1E-15 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain PNUC_RS04055 5aa8645fe47ae17d9a56da7f6e047188 512 Gene3D G3DSA:3.40.50.2020 273 445 6.5E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS04055 5aa8645fe47ae17d9a56da7f6e047188 512 PANTHER PTHR11907 1 480 6.6E-245 T 22-04-2016 PNUC_RS04055 5aa8645fe47ae17d9a56da7f6e047188 512 PANTHER PTHR11907:SF0 1 480 6.6E-245 T 22-04-2016 PNUC_RS04055 5aa8645fe47ae17d9a56da7f6e047188 512 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 44.611 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 PNUC_RS04055 5aa8645fe47ae17d9a56da7f6e047188 512 PIRSF PIRSF000485 1 483 1.0E-157 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 PNUC_RS04055 5aa8645fe47ae17d9a56da7f6e047188 512 SUPERFAMILY SSF53271 252 484 1.84E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS09905 d366d764ae97d74a06963f4823c35912 255 PANTHER PTHR24220:SF497 15 252 1.7E-136 T 22-04-2016 PNUC_RS09905 d366d764ae97d74a06963f4823c35912 255 Gene3D G3DSA:3.40.50.300 6 248 1.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09905 d366d764ae97d74a06963f4823c35912 255 PANTHER PTHR24220 15 252 1.7E-136 T 22-04-2016 PNUC_RS09905 d366d764ae97d74a06963f4823c35912 255 SUPERFAMILY SSF52540 14 251 1.74E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09905 d366d764ae97d74a06963f4823c35912 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 250 4.8E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PNUC_RS09905 d366d764ae97d74a06963f4823c35912 255 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 13 255 1.1E-117 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 PNUC_RS09905 d366d764ae97d74a06963f4823c35912 255 SMART SM00382 38 245 9.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS09905 d366d764ae97d74a06963f4823c35912 255 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS09905 d366d764ae97d74a06963f4823c35912 255 Pfam PF00005 ABC transporter 29 180 5.8E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS09040 b6657c1345544ba515344d1f9156ad54 316 SUPERFAMILY SSF82114 173 313 6.54E-40 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 PNUC_RS09040 b6657c1345544ba515344d1f9156ad54 316 Pfam PF01687 Riboflavin kinase 183 310 2.9E-34 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 PNUC_RS09040 b6657c1345544ba515344d1f9156ad54 316 Gene3D G3DSA:2.40.30.30 185 315 1.7E-37 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 PNUC_RS09040 b6657c1345544ba515344d1f9156ad54 316 PANTHER PTHR22749 16 310 8.6E-118 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 PNUC_RS09040 b6657c1345544ba515344d1f9156ad54 316 Gene3D G3DSA:3.40.50.620 15 184 4.0E-66 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS09040 b6657c1345544ba515344d1f9156ad54 316 PANTHER PTHR22749:SF0 16 310 8.6E-118 T 22-04-2016 PNUC_RS09040 b6657c1345544ba515344d1f9156ad54 316 PIRSF PIRSF004491 3 315 3.9E-100 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 PNUC_RS09040 b6657c1345544ba515344d1f9156ad54 316 Pfam PF06574 FAD synthetase 15 165 1.5E-54 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 PNUC_RS09040 b6657c1345544ba515344d1f9156ad54 316 SUPERFAMILY SSF52374 16 174 9.19E-36 T 22-04-2016 PNUC_RS09040 b6657c1345544ba515344d1f9156ad54 316 SMART SM00904 182 311 2.0E-52 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 PNUC_RS09040 b6657c1345544ba515344d1f9156ad54 316 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 17 311 1.8E-91 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 PNUC_RS08030 59fbae7fea33bbf1a352ee1748a48391 621 PANTHER PTHR33362 59 619 5.3E-241 T 22-04-2016 PNUC_RS08030 59fbae7fea33bbf1a352ee1748a48391 621 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 42 166 5.1E-24 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PNUC_RS08030 59fbae7fea33bbf1a352ee1748a48391 621 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 217 617 7.5E-84 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 PNUC_RS08030 59fbae7fea33bbf1a352ee1748a48391 621 PANTHER PTHR33362:SF8 59 619 5.3E-241 T 22-04-2016 PNUC_RS08030 59fbae7fea33bbf1a352ee1748a48391 621 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 214 615 4.3E-89 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PNUC_RS04405 8619ed51e3a0e2c3f1fb1894f00268c0 186 SUPERFAMILY SSF53335 6 162 3.1E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS04405 8619ed51e3a0e2c3f1fb1894f00268c0 186 Gene3D G3DSA:3.40.50.150 7 164 1.7E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01925 4d8faa8a00bf35b22fd7f6478d66c1c3 135 SMART SM01034 7 99 3.0E-39 T 22-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 PNUC_RS01925 4d8faa8a00bf35b22fd7f6478d66c1c3 135 Pfam PF04940 Sensors of blue-light using FAD 7 96 1.7E-26 T 22-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 PNUC_RS01925 4d8faa8a00bf35b22fd7f6478d66c1c3 135 SUPERFAMILY SSF54975 6 129 2.16E-33 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PNUC_RS06745 ca59072eaf5734c3de5388ab44f11ec9 80 SUPERFAMILY SSF50182 9 71 4.58E-24 T 22-04-2016 IPR010920 LSM domain PNUC_RS06745 ca59072eaf5734c3de5388ab44f11ec9 80 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 9 66 8.6E-29 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PNUC_RS06745 ca59072eaf5734c3de5388ab44f11ec9 80 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 2 66 28.197 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PNUC_RS06745 ca59072eaf5734c3de5388ab44f11ec9 80 Gene3D G3DSA:2.30.30.100 2 71 3.3E-36 T 22-04-2016 PNUC_RS06745 ca59072eaf5734c3de5388ab44f11ec9 80 PANTHER PTHR34772:SF1 3 78 5.4E-34 T 22-04-2016 PNUC_RS06745 ca59072eaf5734c3de5388ab44f11ec9 80 PANTHER PTHR34772 3 78 5.4E-34 T 22-04-2016 PNUC_RS07850 7f193cd6b8b7d003fd650dce26aaa667 390 PIRSF PIRSF000429 9 384 7.9E-23 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PNUC_RS07850 7f193cd6b8b7d003fd650dce26aaa667 390 PANTHER PTHR18919:SF108 2 387 2.2E-126 T 22-04-2016 PNUC_RS07850 7f193cd6b8b7d003fd650dce26aaa667 390 Gene3D G3DSA:3.40.47.10 19 114 7.5E-16 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS07850 7f193cd6b8b7d003fd650dce26aaa667 390 Gene3D G3DSA:3.40.47.10 198 221 7.5E-16 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS07850 7f193cd6b8b7d003fd650dce26aaa667 390 SUPERFAMILY SSF53901 249 375 5.76E-19 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS07850 7f193cd6b8b7d003fd650dce26aaa667 390 SUPERFAMILY SSF53901 5 227 1.61E-19 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS07850 7f193cd6b8b7d003fd650dce26aaa667 390 PANTHER PTHR18919 2 387 2.2E-126 T 22-04-2016 PNUC_RS07850 7f193cd6b8b7d003fd650dce26aaa667 390 Gene3D G3DSA:3.40.47.10 146 183 1.1E-9 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS07850 7f193cd6b8b7d003fd650dce26aaa667 390 Gene3D G3DSA:3.40.47.10 242 355 1.1E-9 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS06790 f88ac548508b9f1b3de81e5127528285 476 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 15 475 65.792 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 PNUC_RS06790 f88ac548508b9f1b3de81e5127528285 476 PANTHER PTHR11061:SF30 5 476 2.4E-89 T 22-04-2016 PNUC_RS06790 f88ac548508b9f1b3de81e5127528285 476 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 42 467 3.0E-83 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 PNUC_RS06790 f88ac548508b9f1b3de81e5127528285 476 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 295 471 4.0E-15 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 PNUC_RS06790 f88ac548508b9f1b3de81e5127528285 476 SUPERFAMILY SSF53335 84 472 2.7E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS06790 f88ac548508b9f1b3de81e5127528285 476 PANTHER PTHR11061 5 476 2.4E-89 T 22-04-2016 PNUC_RS06790 f88ac548508b9f1b3de81e5127528285 476 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 457 467 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site PNUC_RS06790 f88ac548508b9f1b3de81e5127528285 476 Gene3D G3DSA:2.40.50.140 5 95 8.5E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS06790 f88ac548508b9f1b3de81e5127528285 476 Gene3D G3DSA:3.40.50.150 286 474 9.5E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS06790 f88ac548508b9f1b3de81e5127528285 476 SUPERFAMILY SSF50249 13 75 5.43E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 SMART SM00388 308 374 3.7E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 SUPERFAMILY SSF47384 294 375 6.67E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 SUPERFAMILY SSF55874 363 532 9.56E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 Pfam PF00512 His Kinase A (phospho-acceptor) domain 308 374 5.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 SMART SM00387 421 538 2.3E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 SMART SM00448 568 681 2.0E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 PANTHER PTHR24423 53 86 1.8E-105 T 22-04-2016 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 PANTHER PTHR24423 287 722 1.8E-105 T 22-04-2016 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 3.1E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 514 3.1E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 Gene3D G3DSA:1.10.287.130 300 370 6.0E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 532 8.5E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 SUPERFAMILY SSF52172 568 720 3.13E-28 T 22-04-2016 IPR011006 CheY-like superfamily PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 Pfam PF00072 Response regulator receiver domain 571 678 1.0E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 Gene3D G3DSA:3.30.565.10 375 535 3.1E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 PANTHER PTHR24423:SF382 53 86 1.8E-105 T 22-04-2016 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 PANTHER PTHR24423:SF382 287 722 1.8E-105 T 22-04-2016 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 SUPERFAMILY SSF53850 31 236 9.23E-10 T 22-04-2016 PNUC_RS09390 82b86ba99fd06a65387347486cdce29b 806 Gene3D G3DSA:3.40.50.2300 568 689 9.2E-28 T 22-04-2016 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 Hamap MF_00006 Argininosuccinate lyase [argH]. 13 470 42.664 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 PANTHER PTHR11444 15 472 2.5E-213 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 Pfam PF00206 Lyase 18 311 3.4E-73 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 Gene3D G3DSA:1.10.40.30 385 448 3.4E-25 T 22-04-2016 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 Pfam PF14698 Argininosuccinate lyase C-terminal 374 447 5.9E-21 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 Gene3D G3DSA:1.20.200.10 118 384 1.3E-106 T 22-04-2016 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 SUPERFAMILY SSF48557 15 470 8.48E-144 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 Gene3D G3DSA:1.10.275.10 13 117 8.8E-38 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 PRINTS PR00149 Fumarate lyase superfamily signature 286 302 9.2E-29 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 PRINTS PR00149 Fumarate lyase superfamily signature 158 176 9.2E-29 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 PRINTS PR00149 Fumarate lyase superfamily signature 113 131 9.2E-29 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 PRINTS PR00149 Fumarate lyase superfamily signature 242 269 9.2E-29 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 PRINTS PR00145 Argininosuccinate lyase family signature 286 302 4.6E-67 T 22-04-2016 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 PRINTS PR00145 Argininosuccinate lyase family signature 153 173 4.6E-67 T 22-04-2016 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 PRINTS PR00145 Argininosuccinate lyase family signature 204 220 4.6E-67 T 22-04-2016 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 PRINTS PR00145 Argininosuccinate lyase family signature 242 266 4.6E-67 T 22-04-2016 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 PRINTS PR00145 Argininosuccinate lyase family signature 112 134 4.6E-67 T 22-04-2016 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 PRINTS PR00145 Argininosuccinate lyase family signature 321 340 4.6E-67 T 22-04-2016 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 PANTHER PTHR11444:SF3 15 472 2.5E-213 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 ProSitePatterns PS00163 Fumarate lyases signature. 286 295 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PNUC_RS03415 5b23a87c91b15ac6d086f3614cd25beb 472 TIGRFAM TIGR00838 argH: argininosuccinate lyase 15 471 7.3E-180 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 PANTHER PTHR32432 1 405 3.5E-152 T 22-04-2016 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 1.3E-30 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 SUPERFAMILY SSF53067 197 376 4.56E-47 T 22-04-2016 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 Pfam PF14450 Cell division protein FtsA 206 373 1.1E-24 T 22-04-2016 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 Pfam PF14450 Cell division protein FtsA 10 193 9.4E-11 T 22-04-2016 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 Gene3D G3DSA:3.30.420.40 297 351 6.8E-33 T 22-04-2016 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 Gene3D G3DSA:3.30.420.40 208 233 6.8E-33 T 22-04-2016 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 Gene3D G3DSA:3.30.420.40 3 82 6.8E-27 T 22-04-2016 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 Gene3D G3DSA:3.30.420.40 157 207 6.8E-27 T 22-04-2016 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 PIRSF PIRSF003101 1 409 2.5E-148 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 409 30.917 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 Gene3D G3DSA:3.90.640.10 234 296 5.1E-18 T 22-04-2016 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 PANTHER PTHR32432:SF4 1 405 3.5E-152 T 22-04-2016 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 Gene3D G3DSA:3.30.1490.110 87 156 6.4E-16 T 22-04-2016 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 376 1.1E-143 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 SMART SM00842 9 195 1.1E-102 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 PNUC_RS00925 127c6f0183d061a945648df377d8110a 409 SUPERFAMILY SSF53067 7 196 2.85E-60 T 22-04-2016 PNUC_RS04320 41e6a89e0356fe8e9c4b582a889a433c 169 SUPERFAMILY SSF55200 79 167 7.98E-33 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 PNUC_RS04320 41e6a89e0356fe8e9c4b582a889a433c 169 ProSitePatterns PS00938 Initiation factor 3 signature. 55 68 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 PNUC_RS04320 41e6a89e0356fe8e9c4b582a889a433c 169 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 80 164 8.9E-37 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 PNUC_RS04320 41e6a89e0356fe8e9c4b582a889a433c 169 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 167 28.27 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 PNUC_RS04320 41e6a89e0356fe8e9c4b582a889a433c 169 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 4 73 1.0E-27 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 PNUC_RS04320 41e6a89e0356fe8e9c4b582a889a433c 169 Gene3D G3DSA:3.10.20.80 3 74 1.4E-31 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 PNUC_RS04320 41e6a89e0356fe8e9c4b582a889a433c 169 Gene3D G3DSA:3.30.110.10 76 167 3.7E-39 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 PNUC_RS04320 41e6a89e0356fe8e9c4b582a889a433c 169 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 4 166 2.2E-63 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 PNUC_RS04320 41e6a89e0356fe8e9c4b582a889a433c 169 PANTHER PTHR10938 3 169 2.9E-59 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 PNUC_RS04320 41e6a89e0356fe8e9c4b582a889a433c 169 SUPERFAMILY SSF54364 3 74 1.06E-25 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 Pfam PF13328 HD domain 76 225 1.4E-48 T 22-04-2016 IPR003607 HD/PDEase domain PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 Pfam PF02824 TGS domain 438 497 4.7E-18 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 76 770 5.3E-224 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 Pfam PF04607 Region found in RelA / SpoT proteins 285 394 6.7E-34 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 SUPERFAMILY SSF109604 60 239 1.38E-68 T 22-04-2016 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 SUPERFAMILY SSF81301 231 442 1.26E-59 T 22-04-2016 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 Gene3D G3DSA:3.10.20.30 438 499 1.5E-19 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 PANTHER PTHR21262:SF0 24 773 0.0 T 22-04-2016 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 Gene3D G3DSA:3.30.70.260 695 768 4.5E-7 T 22-04-2016 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 PANTHER PTHR21262 24 773 0.0 T 22-04-2016 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 SMART SM00954 285 395 8.3E-63 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 Pfam PF13291 ACT domain 692 770 8.8E-19 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 SMART SM00471 91 203 8.4E-9 T 22-04-2016 IPR003607 HD/PDEase domain PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 SUPERFAMILY SSF81271 425 497 1.49E-20 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 Gene3D G3DSA:3.30.460.10 244 374 7.1E-42 T 22-04-2016 PNUC_RS05620 19e65329f3ce797c3722d2811b623d5c 774 SUPERFAMILY SSF55021 707 771 8.14E-5 T 22-04-2016 PNUC_RS09790 16cb4754c58014051505bcecad1a45bb 352 Hamap MF_00219 Dihydroorotase [pyrC]. 6 352 43.903 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS09790 16cb4754c58014051505bcecad1a45bb 352 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 351 1.7E-140 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS09790 16cb4754c58014051505bcecad1a45bb 352 PANTHER PTHR11647:SF59 7 323 1.3E-158 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS09790 16cb4754c58014051505bcecad1a45bb 352 PIRSF PIRSF001237 4 352 1.8E-135 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS09790 16cb4754c58014051505bcecad1a45bb 352 PANTHER PTHR11647 7 323 1.3E-158 T 22-04-2016 PNUC_RS09790 16cb4754c58014051505bcecad1a45bb 352 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS09790 16cb4754c58014051505bcecad1a45bb 352 SUPERFAMILY SSF51556 7 351 6.41E-139 T 22-04-2016 IPR032466 Metal-dependent hydrolase PNUC_RS09790 16cb4754c58014051505bcecad1a45bb 352 Pfam PF01979 Amidohydrolase family 15 311 3.3E-18 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PNUC_RS09790 16cb4754c58014051505bcecad1a45bb 352 Gene3D G3DSA:3.20.20.140 6 351 1.4E-130 T 22-04-2016 PNUC_RS09790 16cb4754c58014051505bcecad1a45bb 352 ProSitePatterns PS00483 Dihydroorotase signature 2. 254 265 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 772 851 2.1E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 Gene3D G3DSA:3.40.50.300 159 342 2.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 SUPERFAMILY SSF81923 4 156 6.77E-37 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 SUPERFAMILY SSF52540 159 521 2.82E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 857 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 1.2E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 715 729 4.35E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 671 4.35E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 608 626 4.35E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 682 700 4.35E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 Gene3D G3DSA:1.10.8.60 343 428 5.6E-37 T 22-04-2016 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 SUPERFAMILY SSF52540 553 857 1.45E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 638 656 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 PANTHER PTHR11638 1 516 0.0 T 22-04-2016 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 PANTHER PTHR11638 533 859 0.0 T 22-04-2016 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 603 766 3.5E-56 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 PANTHER PTHR11638:SF18 1 516 0.0 T 22-04-2016 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 PANTHER PTHR11638:SF18 533 859 0.0 T 22-04-2016 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 Gene3D G3DSA:3.40.50.300 557 782 7.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 SMART SM01086 772 862 2.8E-33 T 22-04-2016 IPR019489 Clp ATPase, C-terminal PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 2.1E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.4E-7 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 Gene3D G3DSA:1.10.8.60 783 860 3.5E-29 T 22-04-2016 PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 SMART SM00382 198 343 1.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 SMART SM00382 604 746 9.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS02345 c4528e3a71757269afc88f243ae318d1 867 Gene3D G3DSA:1.10.1780.10 1 147 8.3E-41 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PNUC_RS06020 df7852ab1aaf786e803e1ca245908555 396 Pfam PF16868 NMT1-like family 71 289 1.2E-10 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family PNUC_RS06020 df7852ab1aaf786e803e1ca245908555 396 SUPERFAMILY SSF53850 55 289 1.93E-25 T 22-04-2016 PNUC_RS06020 df7852ab1aaf786e803e1ca245908555 396 Gene3D G3DSA:3.40.190.10 132 261 7.1E-7 T 22-04-2016 PNUC_RS06020 df7852ab1aaf786e803e1ca245908555 396 Gene3D G3DSA:3.40.190.10 68 131 4.1E-9 T 22-04-2016 PNUC_RS06020 df7852ab1aaf786e803e1ca245908555 396 Gene3D G3DSA:3.40.190.10 262 289 4.1E-9 T 22-04-2016 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 PANTHER PTHR11956 2 575 2.8E-207 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 SUPERFAMILY SSF47323 453 575 3.47E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 SMART SM01016 7 97 3.7E-33 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 Pfam PF00750 tRNA synthetases class I (R) 120 401 1.8E-16 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 Gene3D G3DSA:3.40.50.620 128 462 6.0E-102 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 13 575 9.0E-118 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 Gene3D G3DSA:1.10.730.10 463 575 4.8E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 138 147 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 SUPERFAMILY SSF55190 6 117 1.44E-21 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 SMART SM00836 458 575 1.4E-51 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 575 24.889 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 2.1E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 167 180 2.1E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 143 159 2.1E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 143 2.1E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 SUPERFAMILY SSF52374 129 468 2.31E-76 T 22-04-2016 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 Pfam PF05746 DALR anticodon binding domain 458 575 5.3E-35 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 Gene3D G3DSA:3.30.1360.70 8 115 3.7E-30 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 PANTHER PTHR11956:SF6 2 575 2.8E-207 T 22-04-2016 PNUC_RS10240 e97ef656189f3c5b4a644e90fd948981 575 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 97 5.8E-24 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 170 9.0E-49 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 Pfam PF00579 tRNA synthetases class I (W and Y) 244 348 1.0E-10 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 398 34.942 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 Gene3D G3DSA:1.10.240.10 273 392 4.3E-33 T 22-04-2016 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 PANTHER PTHR10055:SF6 4 171 5.6E-156 T 22-04-2016 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 PANTHER PTHR10055:SF6 242 400 5.6E-156 T 22-04-2016 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 SUPERFAMILY SSF52374 5 172 1.13E-88 T 22-04-2016 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 SUPERFAMILY SSF52374 243 397 1.13E-88 T 22-04-2016 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 177 3.6E-58 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 PANTHER PTHR10055 4 171 5.6E-156 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 PANTHER PTHR10055 242 400 5.6E-156 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 Gene3D G3DSA:3.40.50.620 5 170 1.4E-83 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 Gene3D G3DSA:3.40.50.620 241 272 1.4E-83 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.34E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 1.34E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PNUC_RS04400 67dc62e25036eb56c7db4decf767125a 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.34E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PNUC_RS02680 eeca53e416f882fe22e552598e6442a1 595 Gene3D G3DSA:2.40.110.10 161 272 4.7E-26 T 22-04-2016 PNUC_RS02680 eeca53e416f882fe22e552598e6442a1 595 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 32 2.6E-7 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PNUC_RS02680 eeca53e416f882fe22e552598e6442a1 595 Gene3D G3DSA:1.20.140.10 273 455 9.5E-56 T 22-04-2016 PNUC_RS02680 eeca53e416f882fe22e552598e6442a1 595 SUPERFAMILY SSF47203 283 455 4.99E-46 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PNUC_RS02680 eeca53e416f882fe22e552598e6442a1 595 Gene3D G3DSA:1.10.540.10 41 160 1.3E-14 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PNUC_RS02680 eeca53e416f882fe22e552598e6442a1 595 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 475 587 3.2E-25 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PNUC_RS02680 eeca53e416f882fe22e552598e6442a1 595 PANTHER PTHR10909:SF296 2 475 4.1E-182 T 22-04-2016 PNUC_RS02680 eeca53e416f882fe22e552598e6442a1 595 SUPERFAMILY SSF56645 41 283 1.15E-56 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PNUC_RS02680 eeca53e416f882fe22e552598e6442a1 595 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 272 6.5E-16 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PNUC_RS02680 eeca53e416f882fe22e552598e6442a1 595 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 158 1.5E-10 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PNUC_RS02680 eeca53e416f882fe22e552598e6442a1 595 PANTHER PTHR10909 2 475 4.1E-182 T 22-04-2016 PNUC_RS02680 eeca53e416f882fe22e552598e6442a1 595 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 450 2.5E-29 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PNUC_RS00995 8a18109ef000777c552e22cc731b2620 348 PANTHER PTHR30012 8 348 8.2E-86 T 22-04-2016 PNUC_RS00995 8a18109ef000777c552e22cc731b2620 348 PRINTS PR00812 Bacterial general secretion pathway protein F signature 329 348 1.6E-11 T 22-04-2016 IPR003004 GspF/PilC family PNUC_RS00995 8a18109ef000777c552e22cc731b2620 348 PRINTS PR00812 Bacterial general secretion pathway protein F signature 105 133 1.6E-11 T 22-04-2016 IPR003004 GspF/PilC family PNUC_RS00995 8a18109ef000777c552e22cc731b2620 348 PRINTS PR00812 Bacterial general secretion pathway protein F signature 15 27 1.6E-11 T 22-04-2016 IPR003004 GspF/PilC family PNUC_RS00995 8a18109ef000777c552e22cc731b2620 348 PRINTS PR00812 Bacterial general secretion pathway protein F signature 313 327 1.6E-11 T 22-04-2016 IPR003004 GspF/PilC family PNUC_RS00995 8a18109ef000777c552e22cc731b2620 348 PANTHER PTHR30012:SF0 8 348 8.2E-86 T 22-04-2016 PNUC_RS00995 8a18109ef000777c552e22cc731b2620 348 Pfam PF00482 Type II secretion system (T2SS), protein F 11 133 7.7E-24 T 22-04-2016 IPR018076 Type II secretion system F domain PNUC_RS00995 8a18109ef000777c552e22cc731b2620 348 Pfam PF00482 Type II secretion system (T2SS), protein F 214 340 1.7E-21 T 22-04-2016 IPR018076 Type II secretion system F domain PNUC_RS10170 874569a49f64b84cdc7617920c6b2c4d 88 PANTHER PTHR38036 1 88 6.5E-16 T 22-04-2016 PNUC_RS10170 874569a49f64b84cdc7617920c6b2c4d 88 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 2 88 19.47 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 PNUC_RS10170 874569a49f64b84cdc7617920c6b2c4d 88 Pfam PF04359 Protein of unknown function (DUF493) 6 88 3.6E-26 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 PNUC_RS10170 874569a49f64b84cdc7617920c6b2c4d 88 SUPERFAMILY SSF117991 3 88 4.71E-24 T 22-04-2016 IPR027471 YbeD-like domain PNUC_RS10170 874569a49f64b84cdc7617920c6b2c4d 88 Gene3D G3DSA:3.30.70.1460 2 88 3.2E-28 T 22-04-2016 IPR027471 YbeD-like domain PNUC_RS10170 874569a49f64b84cdc7617920c6b2c4d 88 PANTHER PTHR38036:SF1 1 88 6.5E-16 T 22-04-2016 PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 Pfam PF13721 SecD export protein N-terminal TM region 1 112 2.2E-34 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 SUPERFAMILY SSF82866 344 359 1.7E-36 T 22-04-2016 PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 SUPERFAMILY SSF82866 405 603 1.7E-36 T 22-04-2016 PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 Gene3D G3DSA:1.20.1640.10 404 605 1.6E-22 T 22-04-2016 PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 132 595 4.3E-129 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 Pfam PF02355 Protein export membrane protein 427 598 4.1E-22 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 609 45.707 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 PANTHER PTHR30081:SF1 1 182 9.7E-170 T 22-04-2016 PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 PANTHER PTHR30081:SF1 323 601 9.7E-170 T 22-04-2016 PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 PANTHER PTHR30081:SF1 235 293 9.7E-170 T 22-04-2016 PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 Pfam PF07549 SecD/SecF GG Motif 128 148 8.8E-5 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 355 588 5.5E-70 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 PANTHER PTHR30081 1 182 9.7E-170 T 22-04-2016 PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 PANTHER PTHR30081 323 601 9.7E-170 T 22-04-2016 PNUC_RS09300 82c142cca8099e8ad2712adf6983c14b 619 PANTHER PTHR30081 235 293 9.7E-170 T 22-04-2016 PNUC_RS06505 6510137ff111fb532b3fa8a49d2a9cc9 442 PANTHER PTHR33567 5 442 2.2E-102 T 22-04-2016 PNUC_RS06505 6510137ff111fb532b3fa8a49d2a9cc9 442 TIGRFAM TIGR00937 2A51: chromate efflux transporter 14 387 7.5E-70 T 22-04-2016 IPR014047 Chromate transporter, long chain PNUC_RS06505 6510137ff111fb532b3fa8a49d2a9cc9 442 Pfam PF02417 Chromate transporter 247 431 6.3E-32 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 PNUC_RS06505 6510137ff111fb532b3fa8a49d2a9cc9 442 Pfam PF02417 Chromate transporter 10 170 3.2E-34 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 PNUC_RS06505 6510137ff111fb532b3fa8a49d2a9cc9 442 PIRSF PIRSF004810 2 438 2.0E-119 T 22-04-2016 IPR014047 Chromate transporter, long chain PNUC_RS06505 6510137ff111fb532b3fa8a49d2a9cc9 442 PANTHER PTHR33567:SF1 5 442 2.2E-102 T 22-04-2016 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 669 712 3.7E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 PANTHER PTHR10169 291 542 1.1E-201 T 22-04-2016 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 Gene3D G3DSA:3.30.1360.40 237 353 7.7E-21 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain PNUC_RS04695 88af55f272251c933714272bc77037ff 764 SMART SM00434 11 483 1.8E-220 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 486 2.4E-133 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 4 763 32.534 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 PANTHER PTHR10169 1 267 1.1E-201 T 22-04-2016 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 PANTHER PTHR10169:SF30 291 542 1.1E-201 T 22-04-2016 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 Gene3D G3DSA:3.90.199.10 31 236 3.2E-110 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 Gene3D G3DSA:3.90.199.10 355 420 3.2E-110 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 PANTHER PTHR10169:SF30 1 267 1.1E-201 T 22-04-2016 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 SUPERFAMILY SSF56719 31 505 9.42E-150 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 Gene3D G3DSA:2.120.10.90 515 732 9.2E-25 T 22-04-2016 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 SUPERFAMILY SSF101904 517 758 4.05E-43 T 22-04-2016 PNUC_RS04695 88af55f272251c933714272bc77037ff 764 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 11 752 4.9E-227 T 22-04-2016 PNUC_RS02140 7a42b7ef62959e775ee97cf7b5412ca9 248 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 245 120.329 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PNUC_RS02140 7a42b7ef62959e775ee97cf7b5412ca9 248 PANTHER PTHR30456 5 247 4.9E-130 T 22-04-2016 PNUC_RS02140 7a42b7ef62959e775ee97cf7b5412ca9 248 Gene3D G3DSA:3.20.20.70 7 242 6.2E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS02140 7a42b7ef62959e775ee97cf7b5412ca9 248 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 9 241 3.8E-93 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PNUC_RS02140 7a42b7ef62959e775ee97cf7b5412ca9 248 SUPERFAMILY SSF63892 7 243 1.31E-96 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PNUC_RS02140 7a42b7ef62959e775ee97cf7b5412ca9 248 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 8 240 4.9E-101 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PNUC_RS02140 7a42b7ef62959e775ee97cf7b5412ca9 248 PANTHER PTHR30456:SF0 5 247 4.9E-130 T 22-04-2016 PNUC_RS07175 3066c08ac21597b773ea638daca643e7 296 SUPERFAMILY SSF103481 42 143 8.76E-13 T 22-04-2016 PNUC_RS07175 3066c08ac21597b773ea638daca643e7 296 PANTHER PTHR12715 1 296 5.7E-53 T 22-04-2016 PNUC_RS07175 3066c08ac21597b773ea638daca643e7 296 PANTHER PTHR12715:SF12 1 296 5.7E-53 T 22-04-2016 PNUC_RS07175 3066c08ac21597b773ea638daca643e7 296 Pfam PF00892 EamA-like transporter family 9 141 8.1E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PNUC_RS07175 3066c08ac21597b773ea638daca643e7 296 Pfam PF00892 EamA-like transporter family 155 295 1.0E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PNUC_RS07175 3066c08ac21597b773ea638daca643e7 296 SUPERFAMILY SSF103481 219 294 1.19E-7 T 22-04-2016 PNUC_RS08990 c7eec96b47fda073ede244998abf1533 311 PANTHER PTHR11795:SF371 1 310 1.5E-118 T 22-04-2016 PNUC_RS08990 c7eec96b47fda073ede244998abf1533 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 295 6.5E-48 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PNUC_RS08990 c7eec96b47fda073ede244998abf1533 311 PANTHER PTHR11795 1 310 1.5E-118 T 22-04-2016 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 SMART SM01230 104 381 7.2E-146 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 97 1.2E-29 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 PANTHER PTHR20852:SF15 4 140 5.4E-253 T 22-04-2016 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 PANTHER PTHR20852:SF15 163 471 5.4E-253 T 22-04-2016 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 470 2.5E-199 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 SUPERFAMILY SSF54368 4 101 7.59E-34 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 PANTHER PTHR20852 4 140 5.4E-253 T 22-04-2016 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 PANTHER PTHR20852 163 471 5.4E-253 T 22-04-2016 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 Pfam PF00120 Glutamine synthetase, catalytic domain 105 468 1.8E-136 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 SUPERFAMILY SSF55931 104 470 4.12E-138 T 22-04-2016 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 Gene3D G3DSA:3.30.590.10 108 458 2.5E-139 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PNUC_RS06585 2c536775804482ff713ac4f701cc2c3e 471 Gene3D G3DSA:3.10.20.70 5 107 4.1E-38 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PNUC_RS03140 a9831495ee49f9c4705724be19013a57 227 SUPERFAMILY SSF48008 79 215 4.18E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PNUC_RS03140 a9831495ee49f9c4705724be19013a57 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 6.25E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS03140 a9831495ee49f9c4705724be19013a57 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 6.25E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS03140 a9831495ee49f9c4705724be19013a57 227 Gene3D G3DSA:1.10.10.10 2 71 1.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03140 a9831495ee49f9c4705724be19013a57 227 PANTHER PTHR11751:SF384 13 99 6.1E-31 T 22-04-2016 PNUC_RS03140 a9831495ee49f9c4705724be19013a57 227 SMART SM00895 83 207 2.2E-16 T 22-04-2016 IPR011711 GntR, C-terminal PNUC_RS03140 a9831495ee49f9c4705724be19013a57 227 Gene3D G3DSA:1.20.120.530 76 218 2.9E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PNUC_RS03140 a9831495ee49f9c4705724be19013a57 227 PANTHER PTHR11751 13 99 6.1E-31 T 22-04-2016 PNUC_RS03140 a9831495ee49f9c4705724be19013a57 227 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 71 7.0E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS03140 a9831495ee49f9c4705724be19013a57 227 Pfam PF07729 FCD domain 85 206 3.7E-25 T 22-04-2016 IPR011711 GntR, C-terminal PNUC_RS03140 a9831495ee49f9c4705724be19013a57 227 SUPERFAMILY SSF46785 6 82 2.25E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03140 a9831495ee49f9c4705724be19013a57 227 SMART SM00345 15 73 4.2E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS03240 d316fedcefa0702270281d3b48a5d807 313 Gene3D G3DSA:3.40.190.10 91 179 1.4E-17 T 22-04-2016 PNUC_RS03240 d316fedcefa0702270281d3b48a5d807 313 Pfam PF03466 LysR substrate binding domain 90 291 1.5E-36 T 22-04-2016 IPR005119 LysR, substrate-binding PNUC_RS03240 d316fedcefa0702270281d3b48a5d807 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.6E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS03240 d316fedcefa0702270281d3b48a5d807 313 PANTHER PTHR30126 1 309 1.3E-131 T 22-04-2016 PNUC_RS03240 d316fedcefa0702270281d3b48a5d807 313 SUPERFAMILY SSF53850 90 299 3.91E-37 T 22-04-2016 PNUC_RS03240 d316fedcefa0702270281d3b48a5d807 313 Gene3D G3DSA:1.10.10.10 1 81 4.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03240 d316fedcefa0702270281d3b48a5d807 313 Gene3D G3DSA:3.40.190.10 180 261 2.1E-26 T 22-04-2016 PNUC_RS03240 d316fedcefa0702270281d3b48a5d807 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS03240 d316fedcefa0702270281d3b48a5d807 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS03240 d316fedcefa0702270281d3b48a5d807 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS03240 d316fedcefa0702270281d3b48a5d807 313 PANTHER PTHR30126:SF6 1 309 1.3E-131 T 22-04-2016 PNUC_RS03240 d316fedcefa0702270281d3b48a5d807 313 SUPERFAMILY SSF46785 2 86 1.05E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS06290 6c5e3026c6d263e665a8a8d9f683d983 291 Hamap MF_01384 Urease accessory protein UreD [ureD]. 20 275 28.201 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 PNUC_RS06290 6c5e3026c6d263e665a8a8d9f683d983 291 PANTHER PTHR33643:SF1 20 288 7.0E-41 T 22-04-2016 PNUC_RS06290 6c5e3026c6d263e665a8a8d9f683d983 291 Pfam PF01774 UreD urease accessory protein 63 264 1.8E-45 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 PNUC_RS06290 6c5e3026c6d263e665a8a8d9f683d983 291 PANTHER PTHR33643 20 288 7.0E-41 T 22-04-2016 PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 Pfam PF00535 Glycosyl transferase family 2 138 325 4.1E-31 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 Gene3D G3DSA:3.90.550.10 135 390 1.8E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 Pfam PF07238 PilZ domain 572 661 6.2E-8 T 22-04-2016 IPR009875 PilZ domain GO:0035438 PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 PANTHER PTHR10587:SF94 36 582 1.3E-69 T 22-04-2016 PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 SUPERFAMILY SSF53448 137 434 1.27E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 SUPERFAMILY SSF141371 589 660 1.04E-11 T 22-04-2016 PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 PANTHER PTHR10587 36 582 1.3E-69 T 22-04-2016 PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 Gene3D G3DSA:2.40.10.220 573 657 1.4E-4 T 22-04-2016 PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 PRINTS PR01439 Cellulose synthase subunit A signature 403 429 4.7E-19 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 PRINTS PR01439 Cellulose synthase subunit A signature 144 163 4.7E-19 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 PRINTS PR01439 Cellulose synthase subunit A signature 472 491 4.7E-19 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 PRINTS PR01439 Cellulose synthase subunit A signature 544 565 4.7E-19 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 PRINTS PR01439 Cellulose synthase subunit A signature 89 114 4.7E-19 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PNUC_RS06155 12d5b96423c00bd9a306a42e1a38191e 909 PRINTS PR01439 Cellulose synthase subunit A signature 61 81 4.7E-19 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PNUC_RS04805 c5b44abae8c019661d6302a0246bf665 543 Gene3D G3DSA:3.40.50.1820 147 489 1.6E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS04805 c5b44abae8c019661d6302a0246bf665 543 PANTHER PTHR36837 51 538 6.0E-190 T 22-04-2016 PNUC_RS04805 c5b44abae8c019661d6302a0246bf665 543 SUPERFAMILY SSF53474 190 468 2.16E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS04805 c5b44abae8c019661d6302a0246bf665 543 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 50 216 1.8E-66 T 22-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- PNUC_RS04805 c5b44abae8c019661d6302a0246bf665 543 PANTHER PTHR36837:SF2 51 538 6.0E-190 T 22-04-2016 PNUC_RS04805 c5b44abae8c019661d6302a0246bf665 543 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 36 537 2.6E-216 T 22-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 Gene3D G3DSA:1.10.8.280 296 415 4.9E-40 T 22-04-2016 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 PANTHER PTHR32282 1 184 0.0 T 22-04-2016 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 PANTHER PTHR32282 201 962 0.0 T 22-04-2016 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 SUPERFAMILY SSF52540 631 923 1.3E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 PANTHER PTHR32282:SF2 1 184 0.0 T 22-04-2016 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 PANTHER PTHR32282:SF2 201 962 0.0 T 22-04-2016 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 Gene3D G3DSA:3.30.1490.20 131 154 1.4E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 Gene3D G3DSA:3.30.1490.20 211 259 1.4E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 Gene3D G3DSA:1.20.1580.10 416 490 2.1E-52 T 22-04-2016 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 Gene3D G3DSA:1.20.1580.10 260 293 2.1E-52 T 22-04-2016 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 Gene3D G3DSA:1.20.1580.10 92 130 2.1E-52 T 22-04-2016 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 Gene3D G3DSA:1.20.1580.10 705 831 1.1E-53 T 22-04-2016 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 SUPERFAMILY SSF52540 5 205 5.74E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 SUPERFAMILY SSF52540 435 582 5.74E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 Gene3D G3DSA:3.40.50.300 628 703 2.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 Gene3D G3DSA:3.40.50.300 832 950 2.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 Gene3D G3DSA:3.40.50.300 491 609 8.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 Gene3D G3DSA:3.40.50.300 3 52 8.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 936 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 951 22.21 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 ProSitePatterns PS00211 ABC transporters family signature. 841 855 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS09875 3bd5eedca1a7d6141de98cbb29386862 962 ProSitePatterns PS00211 ABC transporters family signature. 500 514 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 SUPERFAMILY SSF52833 103 196 4.29E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 Gene3D G3DSA:3.50.50.60 337 437 7.7E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PIRSF PIRSF000238 1 517 8.6E-260 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 SUPERFAMILY SSF51905 204 510 1.62E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 341 361 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PANTHER PTHR22912 198 510 1.3E-206 T 22-04-2016 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 Gene3D G3DSA:3.50.50.60 438 513 5.1E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 Pfam PF13192 Thioredoxin domain 124 192 1.0E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 514 1.2E-242 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 Gene3D G3DSA:3.40.30.10 102 196 6.2E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 500 2.1E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PANTHER PTHR22912:SF107 198 510 1.3E-206 T 22-04-2016 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 311 329 4.0E-40 T 22-04-2016 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 4.0E-40 T 22-04-2016 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 438 454 4.0E-40 T 22-04-2016 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 371 4.0E-40 T 22-04-2016 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 464 486 4.0E-40 T 22-04-2016 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 3.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 312 320 3.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 401 417 3.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 440 461 3.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 334 346 3.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 349 373 3.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 3.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 474 492 3.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 3.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 SUPERFAMILY SSF52833 1 101 1.68E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 Gene3D G3DSA:3.50.50.60 211 336 9.4E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08015 54b4195a77d2fdef698f6a73aa90ee3a 526 Gene3D G3DSA:3.40.30.10 1 93 6.3E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 PANTHER PTHR11451 18 265 1.1E-85 T 22-04-2016 PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 SUPERFAMILY SSF52374 18 273 3.85E-80 T 22-04-2016 PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 Gene3D G3DSA:3.90.800.10 83 204 3.1E-23 T 22-04-2016 PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 18 316 39.789 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 PRINTS PR00987 Glutamyl-tRNA synthetase signature 219 227 1.9E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 PRINTS PR00987 Glutamyl-tRNA synthetase signature 50 63 1.9E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 46 1.9E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 PRINTS PR00987 Glutamyl-tRNA synthetase signature 203 213 1.9E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 33 1.9E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 18 307 2.6E-111 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 Gene3D G3DSA:3.40.50.620 205 254 4.5E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 Gene3D G3DSA:3.40.50.620 18 82 4.5E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 19 274 3.0E-47 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS03160 5de5c542ab25d1cff0cf782c20ab3d40 316 PANTHER PTHR11451:SF35 18 265 1.1E-85 T 22-04-2016 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 SUPERFAMILY SSF55326 633 831 4.45E-65 T 22-04-2016 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1085 1343 2.5E-105 T 22-04-2016 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 SUPERFAMILY SSF52317 1082 1343 3.33E-95 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 7 1343 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 SUPERFAMILY SSF56042 839 1078 3.29E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 Gene3D G3DSA:3.40.50.880 1086 1342 4.4E-11 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 SUPERFAMILY SSF82697 4 163 1.99E-36 T 22-04-2016 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 SUPERFAMILY SSF55326 234 436 2.83E-58 T 22-04-2016 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 Gene3D G3DSA:3.30.1330.10 660 825 1.1E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 Gene3D G3DSA:3.30.1330.10 224 431 2.4E-37 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 SMART SM01211 1085 1344 3.3E-151 T 22-04-2016 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 PANTHER PTHR10099 3 934 0.0 T 22-04-2016 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 PANTHER PTHR10099 960 1345 0.0 T 22-04-2016 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 SUPERFAMILY SSF109736 169 233 4.45E-20 T 22-04-2016 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 Gene3D G3DSA:3.90.650.10 886 1003 1.7E-4 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 PANTHER PTHR10099:SF5 3 934 0.0 T 22-04-2016 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 PANTHER PTHR10099:SF5 960 1345 0.0 T 22-04-2016 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1345 20.669 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 SUPERFAMILY SSF56042 439 670 3.44E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 Pfam PF02769 AIR synthase related protein, C-terminal domain 869 1009 1.4E-10 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS04900 2636e7399fe62375af7e85b270c8fb06 1345 Pfam PF02769 AIR synthase related protein, C-terminal domain 441 598 9.9E-30 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS01130 f1d0ec2ece555ac84fd071a1855907d3 149 SUPERFAMILY SSF52304 6 148 3.66E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PNUC_RS01130 f1d0ec2ece555ac84fd071a1855907d3 149 Pfam PF01220 Dehydroquinase class II 6 143 9.4E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PNUC_RS01130 f1d0ec2ece555ac84fd071a1855907d3 149 PANTHER PTHR21272 2 149 2.0E-87 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PNUC_RS01130 f1d0ec2ece555ac84fd071a1855907d3 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 136 2.0E-50 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PNUC_RS01130 f1d0ec2ece555ac84fd071a1855907d3 149 Gene3D G3DSA:3.40.50.9100 4 148 6.3E-68 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PNUC_RS01130 f1d0ec2ece555ac84fd071a1855907d3 149 PIRSF PIRSF001399 3 149 2.1E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PNUC_RS01130 f1d0ec2ece555ac84fd071a1855907d3 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PNUC_RS01130 f1d0ec2ece555ac84fd071a1855907d3 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 7 145 1.1E-63 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PNUC_RS01130 f1d0ec2ece555ac84fd071a1855907d3 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 72.722 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PNUC_RS08490 ee28fbf9e0d112b3986baf3be6f71c17 258 PIRSF PIRSF006241 1 258 5.4E-94 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 PNUC_RS08490 ee28fbf9e0d112b3986baf3be6f71c17 258 PANTHER PTHR12110 1 256 5.9E-104 T 22-04-2016 PNUC_RS08490 ee28fbf9e0d112b3986baf3be6f71c17 258 Gene3D G3DSA:3.20.20.150 1 256 4.7E-90 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PNUC_RS08490 ee28fbf9e0d112b3986baf3be6f71c17 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 5.8E-32 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PNUC_RS08490 ee28fbf9e0d112b3986baf3be6f71c17 258 PANTHER PTHR12110:SF12 1 256 5.9E-104 T 22-04-2016 PNUC_RS08490 ee28fbf9e0d112b3986baf3be6f71c17 258 SUPERFAMILY SSF51658 1 256 4.15E-84 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PNUC_RS10770 6ed0bf1b985d5b5ad656afc62e650ac9 171 PANTHER PTHR10458 1 162 3.4E-80 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS10770 6ed0bf1b985d5b5ad656afc62e650ac9 171 PIRSF PIRSF004749 1 170 6.6E-56 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS10770 6ed0bf1b985d5b5ad656afc62e650ac9 171 Hamap MF_00163 Peptide deformylase [def]. 2 163 29.749 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS10770 6ed0bf1b985d5b5ad656afc62e650ac9 171 Pfam PF01327 Polypeptide deformylase 5 152 5.5E-50 T 22-04-2016 IPR023635 Peptide deformylase PNUC_RS10770 6ed0bf1b985d5b5ad656afc62e650ac9 171 PRINTS PR01576 Peptide deformylase signature 90 101 6.0E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS10770 6ed0bf1b985d5b5ad656afc62e650ac9 171 PRINTS PR01576 Peptide deformylase signature 33 62 6.0E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS10770 6ed0bf1b985d5b5ad656afc62e650ac9 171 PRINTS PR01576 Peptide deformylase signature 102 120 6.0E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS10770 6ed0bf1b985d5b5ad656afc62e650ac9 171 PRINTS PR01576 Peptide deformylase signature 121 150 6.0E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS10770 6ed0bf1b985d5b5ad656afc62e650ac9 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 4.1E-57 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS10770 6ed0bf1b985d5b5ad656afc62e650ac9 171 SUPERFAMILY SSF56420 3 164 2.09E-59 T 22-04-2016 IPR023635 Peptide deformylase PNUC_RS10770 6ed0bf1b985d5b5ad656afc62e650ac9 171 Gene3D G3DSA:3.90.45.10 6 165 3.0E-63 T 22-04-2016 IPR023635 Peptide deformylase PNUC_RS10770 6ed0bf1b985d5b5ad656afc62e650ac9 171 PANTHER PTHR10458:SF10 1 162 3.4E-80 T 22-04-2016 PNUC_RS02435 84cca683a95d397c7bd416c585ceb046 310 Gene3D G3DSA:3.40.50.720 2 181 3.9E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02435 84cca683a95d397c7bd416c585ceb046 310 SUPERFAMILY SSF51735 1 176 5.8E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02435 84cca683a95d397c7bd416c585ceb046 310 Gene3D G3DSA:1.10.1040.10 182 278 5.4E-16 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PNUC_RS02435 84cca683a95d397c7bd416c585ceb046 310 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3 177 4.4E-38 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PNUC_RS02435 84cca683a95d397c7bd416c585ceb046 310 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 180 277 1.5E-15 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PNUC_RS02435 84cca683a95d397c7bd416c585ceb046 310 SUPERFAMILY SSF48179 179 293 1.7E-18 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS02435 84cca683a95d397c7bd416c585ceb046 310 PIRSF PIRSF000105 1 308 1.2E-67 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 PNUC_RS02435 84cca683a95d397c7bd416c585ceb046 310 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 177 201 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PNUC_RS02435 84cca683a95d397c7bd416c585ceb046 310 PANTHER PTHR23309 3 227 1.8E-61 T 22-04-2016 PNUC_RS00640 1a5b703354b4a87b923ff2785361793a 158 Pfam PF02416 mttA/Hcf106 family 4 34 2.9E-6 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PNUC_RS00640 1a5b703354b4a87b923ff2785361793a 158 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 72 1.4E-18 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 PNUC_RS00640 1a5b703354b4a87b923ff2785361793a 158 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.09E-13 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 PNUC_RS00640 1a5b703354b4a87b923ff2785361793a 158 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.09E-13 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 PNUC_RS00640 1a5b703354b4a87b923ff2785361793a 158 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.09E-13 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 PNUC_RS00640 1a5b703354b4a87b923ff2785361793a 158 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 158 14.577 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 PNUC_RS00640 1a5b703354b4a87b923ff2785361793a 158 PANTHER PTHR33162 1 60 4.1E-14 T 22-04-2016 PNUC_RS00640 1a5b703354b4a87b923ff2785361793a 158 PANTHER PTHR33162:SF4 1 60 4.1E-14 T 22-04-2016 PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 Gene3D G3DSA:3.40.50.300 105 295 1.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 SUPERFAMILY SSF47364 4 75 1.15E-12 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 Pfam PF00448 SRP54-type protein, GTPase domain 92 295 1.8E-65 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 SMART SM00382 91 277 1.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 16 296 54.346 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 16 295 7.1E-93 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 SMART SM00963 1 73 2.1E-11 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 SMART SM00962 92 296 2.9E-99 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 PANTHER PTHR11564:SF16 1 295 1.8E-99 T 22-04-2016 PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 PANTHER PTHR11564 1 295 1.8E-99 T 22-04-2016 PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 SUPERFAMILY SSF52540 88 290 1.02E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 Gene3D G3DSA:1.20.120.140 18 104 3.4E-22 T 22-04-2016 PNUC_RS09995 c663392dda7e4ec29c675481124615b4 296 Pfam PF02881 SRP54-type protein, helical bundle domain 4 68 1.0E-11 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PNUC_RS00490 ad8dd995b1238428e11a95262cd5d63c 126 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 12 121 1.0E-29 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PNUC_RS00490 ad8dd995b1238428e11a95262cd5d63c 126 Pfam PF01491 Frataxin-like domain 12 119 9.7E-24 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PNUC_RS00490 ad8dd995b1238428e11a95262cd5d63c 126 SUPERFAMILY SSF55387 9 120 5.23E-28 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PNUC_RS00490 ad8dd995b1238428e11a95262cd5d63c 126 SMART SM01219 11 123 1.7E-40 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PNUC_RS00490 ad8dd995b1238428e11a95262cd5d63c 126 ProSitePatterns PS01344 Frataxin family signature. 63 77 - T 22-04-2016 IPR020895 Frataxin conserved site PNUC_RS00490 ad8dd995b1238428e11a95262cd5d63c 126 Hamap MF_00142 Protein CyaY [cyaY]. 11 122 22.23 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PNUC_RS00490 ad8dd995b1238428e11a95262cd5d63c 126 Gene3D G3DSA:3.30.920.10 8 122 3.6E-25 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PNUC_RS00490 ad8dd995b1238428e11a95262cd5d63c 126 PANTHER PTHR16821 11 120 1.3E-16 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 PANTHER PTHR32063:SF14 1 1010 0.0 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 SUPERFAMILY SSF82714 695 779 4.71E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 Gene3D G3DSA:3.30.70.1430 555 647 2.0E-12 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 Gene3D G3DSA:3.30.2090.10 183 268 4.2E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 PANTHER PTHR32063 1 1010 0.0 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 SUPERFAMILY SSF82693 138 181 1.67E-20 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 SUPERFAMILY SSF82693 267 323 1.67E-20 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 Pfam PF00873 AcrB/AcrD/AcrF family 5 999 7.4E-259 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 Gene3D G3DSA:1.20.1640.10 822 1008 1.4E-47 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 SUPERFAMILY SSF82714 184 265 1.7E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 SUPERFAMILY SSF82693 647 694 1.73E-14 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 SUPERFAMILY SSF82693 781 830 1.73E-14 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 Gene3D G3DSA:3.30.70.1430 42 140 2.5E-24 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 SUPERFAMILY SSF82866 808 999 3.01E-43 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 Gene3D G3DSA:3.30.2090.10 695 779 8.7E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 SUPERFAMILY SSF82693 553 647 5.49E-17 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 SUPERFAMILY SSF82866 290 487 4.32E-46 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 SUPERFAMILY SSF82693 44 130 1.12E-21 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 8.3E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 8.3E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 PRINTS PR00702 Acriflavin resistance protein family signature 600 614 8.3E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 8.3E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 8.3E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 8.3E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.3E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 8.3E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 8.3E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 Gene3D G3DSA:1.10.3850.10 275 489 6.7E-55 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 Gene3D G3DSA:3.30.70.1440 648 693 9.5E-10 T 22-04-2016 PNUC_RS10290 4e80dea8eb82ad4b5f4d257055a96e78 1011 Gene3D G3DSA:3.30.70.1440 790 821 9.5E-10 T 22-04-2016 PNUC_RS01270 48ffe2644f7ef47d3e413a5fdacc2ec9 434 PANTHER PTHR11986 2 434 1.1E-202 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PNUC_RS01270 48ffe2644f7ef47d3e413a5fdacc2ec9 434 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 278 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PNUC_RS01270 48ffe2644f7ef47d3e413a5fdacc2ec9 434 Gene3D G3DSA:3.90.1150.10 4 72 3.8E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS01270 48ffe2644f7ef47d3e413a5fdacc2ec9 434 Gene3D G3DSA:3.90.1150.10 327 430 3.8E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS01270 48ffe2644f7ef47d3e413a5fdacc2ec9 434 Gene3D G3DSA:3.40.640.10 73 323 1.5E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS01270 48ffe2644f7ef47d3e413a5fdacc2ec9 434 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 433 100.58 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 PNUC_RS01270 48ffe2644f7ef47d3e413a5fdacc2ec9 434 SUPERFAMILY SSF53383 5 432 1.17E-126 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS01270 48ffe2644f7ef47d3e413a5fdacc2ec9 434 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 7 431 1.3E-183 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 PNUC_RS01270 48ffe2644f7ef47d3e413a5fdacc2ec9 434 Pfam PF00202 Aminotransferase class-III 35 402 3.0E-76 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PNUC_RS01270 48ffe2644f7ef47d3e413a5fdacc2ec9 434 PANTHER PTHR11986:SF5 2 434 1.1E-202 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1385 10.346 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 Pfam PF05000 RNA polymerase Rpb1, domain 4 683 772 1.7E-17 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 346 3.7E-87 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 Gene3D G3DSA:2.40.50.100 1166 1218 4.4E-8 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 PANTHER PTHR19376:SF32 4 555 0.0 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 PANTHER PTHR19376:SF32 975 1167 0.0 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 PANTHER PTHR19376:SF32 579 952 0.0 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 PANTHER PTHR19376:SF32 1312 1397 0.0 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 PANTHER PTHR19376:SF32 1186 1271 0.0 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 597 32.108 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 PANTHER PTHR19376 4 555 0.0 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 PANTHER PTHR19376 975 1167 0.0 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 PANTHER PTHR19376 579 952 0.0 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 PANTHER PTHR19376 1312 1397 0.0 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 PANTHER PTHR19376 1186 1271 0.0 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 SMART SM00663 239 518 2.8E-174 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1375 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 Pfam PF04983 RNA polymerase Rpb1, domain 3 493 653 2.7E-22 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 Gene3D G3DSA:2.40.40.20 421 493 3.4E-36 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 Gene3D G3DSA:2.40.40.20 353 380 3.4E-36 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 SUPERFAMILY SSF64484 1143 1373 0.0 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 SUPERFAMILY SSF64484 17 953 0.0 T 22-04-2016 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 Pfam PF04998 RNA polymerase Rpb1, domain 5 775 1325 6.9E-76 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 Pfam PF00623 RNA polymerase Rpb1, domain 2 395 489 4.7E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00285 ebe71cb4e5d5b53ba09182621ee37f2d 1420 Pfam PF00623 RNA polymerase Rpb1, domain 2 348 389 1.4E-7 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS02450 f001eeb08c30d9c32f41e965b6f07381 316 SUPERFAMILY SSF53850 21 312 7.65E-70 T 22-04-2016 PNUC_RS02450 f001eeb08c30d9c32f41e965b6f07381 316 Pfam PF16868 NMT1-like family 25 311 3.8E-77 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family PNUC_RS02450 f001eeb08c30d9c32f41e965b6f07381 316 Gene3D G3DSA:3.40.190.10 244 311 1.1E-46 T 22-04-2016 PNUC_RS02450 f001eeb08c30d9c32f41e965b6f07381 316 Gene3D G3DSA:3.40.190.10 21 101 1.1E-46 T 22-04-2016 PNUC_RS02450 f001eeb08c30d9c32f41e965b6f07381 316 Gene3D G3DSA:3.40.190.10 108 243 3.1E-33 T 22-04-2016 PNUC_RS02450 f001eeb08c30d9c32f41e965b6f07381 316 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 19 312 3.6E-91 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family PNUC_RS02450 f001eeb08c30d9c32f41e965b6f07381 316 PANTHER PTHR30024 3 311 9.8E-66 T 22-04-2016 PNUC_RS02450 f001eeb08c30d9c32f41e965b6f07381 316 PANTHER PTHR30024:SF5 3 311 9.8E-66 T 22-04-2016 PNUC_RS09145 d3714499d429921d91bceaca8fdfdbaa 333 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 19 314 8.2E-85 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PNUC_RS09145 d3714499d429921d91bceaca8fdfdbaa 333 Gene3D G3DSA:1.10.287.890 225 307 2.2E-27 T 22-04-2016 PNUC_RS09145 d3714499d429921d91bceaca8fdfdbaa 333 PANTHER PTHR11088 3 314 6.2E-90 T 22-04-2016 PNUC_RS09145 d3714499d429921d91bceaca8fdfdbaa 333 Pfam PF01715 IPP transferase 57 307 9.2E-79 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PNUC_RS09145 d3714499d429921d91bceaca8fdfdbaa 333 Pfam PF01695 IstB-like ATP binding protein 19 54 1.3E-5 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 PNUC_RS09145 d3714499d429921d91bceaca8fdfdbaa 333 SUPERFAMILY SSF52540 18 169 1.07E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09145 d3714499d429921d91bceaca8fdfdbaa 333 PANTHER PTHR11088:SF25 3 314 6.2E-90 T 22-04-2016 PNUC_RS09145 d3714499d429921d91bceaca8fdfdbaa 333 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 18 326 28.673 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PNUC_RS09145 d3714499d429921d91bceaca8fdfdbaa 333 Gene3D G3DSA:3.40.50.300 16 190 1.3E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 Pfam PF13180 PDZ domain 99 178 2.2E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 SMART SM00228 99 170 3.2E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 Pfam PF03572 Peptidase family S41 197 378 1.3E-53 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 SMART SM00245 172 379 3.5E-64 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 SUPERFAMILY SSF52096 191 383 3.48E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 SUPERFAMILY SSF52096 42 117 3.48E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 SUPERFAMILY SSF50156 90 183 7.74E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 Gene3D G3DSA:3.30.750.44 57 105 3.2E-9 T 22-04-2016 PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 PANTHER PTHR32060 289 448 7.4E-112 T 22-04-2016 PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 PANTHER PTHR32060 54 273 7.4E-112 T 22-04-2016 PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 Gene3D G3DSA:3.90.226.10 446 471 3.0E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 Gene3D G3DSA:3.90.226.10 182 381 3.0E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 52 383 1.4E-97 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 PNUC_RS10100 77f46a86fee62a4fd3ad7a14f055e4ba 477 Gene3D G3DSA:2.30.42.10 106 181 1.6E-28 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS04040 7ba5f21c1b0377cdbc829eef91ba70db 411 Gene3D G3DSA:3.90.190.20 268 407 7.2E-40 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS04040 7ba5f21c1b0377cdbc829eef91ba70db 411 SUPERFAMILY SSF53244 266 406 1.01E-30 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS04040 7ba5f21c1b0377cdbc829eef91ba70db 411 Pfam PF02875 Mur ligase family, glutamate ligase domain 267 319 8.6E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS04040 7ba5f21c1b0377cdbc829eef91ba70db 411 SUPERFAMILY SSF53623 1 264 2.4E-80 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS04040 7ba5f21c1b0377cdbc829eef91ba70db 411 PANTHER PTHR11136 1 405 7.9E-106 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 PNUC_RS04040 7ba5f21c1b0377cdbc829eef91ba70db 411 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 22 45 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 PNUC_RS04040 7ba5f21c1b0377cdbc829eef91ba70db 411 PIRSF PIRSF001563 1 411 1.0E-98 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 PNUC_RS04040 7ba5f21c1b0377cdbc829eef91ba70db 411 Pfam PF08245 Mur ligase middle domain 24 201 5.9E-12 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS04040 7ba5f21c1b0377cdbc829eef91ba70db 411 TIGRFAM TIGR01499 folC: bifunctional protein FolC 3 405 1.0E-95 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 PNUC_RS04040 7ba5f21c1b0377cdbc829eef91ba70db 411 Gene3D G3DSA:3.40.1190.10 1 266 1.5E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS02220 856d7b4134ab25dda3454886d8a79091 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal PNUC_RS02220 856d7b4134ab25dda3454886d8a79091 150 SUPERFAMILY SSF55658 1 56 8.72E-17 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PNUC_RS02220 856d7b4134ab25dda3454886d8a79091 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 6.6E-21 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal PNUC_RS02220 856d7b4134ab25dda3454886d8a79091 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 2.4E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal PNUC_RS02220 856d7b4134ab25dda3454886d8a79091 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.162 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02220 856d7b4134ab25dda3454886d8a79091 150 SUPERFAMILY SSF55653 60 148 4.97E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal PNUC_RS02220 856d7b4134ab25dda3454886d8a79091 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 8.5E-44 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02220 856d7b4134ab25dda3454886d8a79091 150 Gene3D G3DSA:3.40.5.10 1 52 9.6E-23 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal PNUC_RS02220 856d7b4134ab25dda3454886d8a79091 150 Gene3D G3DSA:3.10.430.100 60 148 1.0E-26 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal PNUC_RS02220 856d7b4134ab25dda3454886d8a79091 150 PANTHER PTHR21368 1 146 1.6E-45 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 SMART SM00448 13 127 1.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 PANTHER PTHR26402:SF613 13 209 3.6E-65 T 22-04-2016 PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 Gene3D G3DSA:3.40.50.2300 15 159 2.1E-32 T 22-04-2016 PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 Gene3D G3DSA:1.10.10.10 160 210 3.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.8E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.8E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.8E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 Pfam PF00072 Response regulator receiver domain 15 126 5.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 SUPERFAMILY SSF46894 143 209 2.69E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 SMART SM00421 151 208 2.0E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 PANTHER PTHR26402 13 209 3.6E-65 T 22-04-2016 PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 SUPERFAMILY SSF52172 15 153 1.99E-31 T 22-04-2016 IPR011006 CheY-like superfamily PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 9.1E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS03825 2226c1d0843a6f39b71d4fe23e85b00e 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS08850 04f80351044e891716dbe6dd3baa7659 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.383 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PNUC_RS08850 04f80351044e891716dbe6dd3baa7659 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.4E-14 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PNUC_RS08850 04f80351044e891716dbe6dd3baa7659 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.4E-14 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PNUC_RS08850 04f80351044e891716dbe6dd3baa7659 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.4E-14 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PNUC_RS08850 04f80351044e891716dbe6dd3baa7659 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.4E-14 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PNUC_RS08850 04f80351044e891716dbe6dd3baa7659 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.9E-24 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PNUC_RS08850 04f80351044e891716dbe6dd3baa7659 70 Pfam PF01165 Ribosomal protein S21 3 57 1.2E-20 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PNUC_RS08850 04f80351044e891716dbe6dd3baa7659 70 PANTHER PTHR21109 1 60 2.5E-22 T 22-04-2016 PNUC_RS08850 04f80351044e891716dbe6dd3baa7659 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 42 6.0E-8 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PNUC_RS08850 04f80351044e891716dbe6dd3baa7659 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS03400 50aa9bc8bae11feb2634a7e626fe4ad7 120 PANTHER PTHR21012 2 117 1.0E-59 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PNUC_RS03400 50aa9bc8bae11feb2634a7e626fe4ad7 120 Pfam PF02261 Aspartate decarboxylase 1 114 8.4E-48 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PNUC_RS03400 50aa9bc8bae11feb2634a7e626fe4ad7 120 PIRSF PIRSF006246 1 120 1.3E-49 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PNUC_RS03400 50aa9bc8bae11feb2634a7e626fe4ad7 120 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 95 3.0E-38 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PNUC_RS03400 50aa9bc8bae11feb2634a7e626fe4ad7 120 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 120 67.986 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PNUC_RS03400 50aa9bc8bae11feb2634a7e626fe4ad7 120 Gene3D G3DSA:2.40.40.20 1 119 1.5E-51 T 22-04-2016 PNUC_RS03400 50aa9bc8bae11feb2634a7e626fe4ad7 120 SUPERFAMILY SSF50692 1 117 3.35E-47 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain PNUC_RS03400 50aa9bc8bae11feb2634a7e626fe4ad7 120 PANTHER PTHR21012:SF0 2 117 1.0E-59 T 22-04-2016 PNUC_RS03400 50aa9bc8bae11feb2634a7e626fe4ad7 120 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 118 3.5E-50 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 SUPERFAMILY SSF81923 1 143 3.27E-56 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 SMART SM00382 209 355 9.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 SMART SM00382 490 639 2.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 Gene3D G3DSA:1.10.8.60 668 744 5.5E-26 T 22-04-2016 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 4.1E-21 T 22-04-2016 IPR019489 Clp ATPase, C-terminal PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 62 1.7E-11 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 4.0E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 Gene3D G3DSA:1.10.1780.10 1 143 5.1E-40 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 345 9.0E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 Gene3D G3DSA:3.40.50.300 172 352 9.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 SMART SM01086 656 746 2.4E-30 T 22-04-2016 IPR019489 Clp ATPase, C-terminal PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 PANTHER PTHR11638:SF111 1 767 0.0 T 22-04-2016 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 Gene3D G3DSA:3.40.50.300 445 667 4.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 PANTHER PTHR11638 1 767 0.0 T 22-04-2016 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 Gene3D G3DSA:1.10.8.60 354 435 1.2E-30 T 22-04-2016 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 SUPERFAMILY SSF52540 171 424 1.24E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09085 2d4f30fa6d1181b235e7be498d46446f 768 SUPERFAMILY SSF52540 440 741 1.15E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 1.2E-101 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 35.418 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 4.0E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.0E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.0E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 4.0E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 SUPERFAMILY SSF52943 2 289 2.62E-94 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 Gene3D G3DSA:1.10.287.80 204 237 1.3E-40 T 22-04-2016 PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 Gene3D G3DSA:1.10.287.80 19 60 1.3E-40 T 22-04-2016 PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 Pfam PF00231 ATP synthase 4 288 7.9E-91 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 Gene3D G3DSA:3.40.1380.10 66 192 1.6E-38 T 22-04-2016 PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 Gene3D G3DSA:1.10.287.80 238 284 3.3E-28 T 22-04-2016 PNUC_RS00125 567dc3210cee64fb9c3949f8cb2ea50f 289 PANTHER PTHR11693 1 289 2.7E-116 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS07120 1977a78bb7abae6b6b7f53882008c617 285 PANTHER PTHR31223:SF1 110 283 1.3E-56 T 22-04-2016 PNUC_RS07120 1977a78bb7abae6b6b7f53882008c617 285 Gene3D G3DSA:3.40.50.450 52 283 3.2E-60 T 22-04-2016 PNUC_RS07120 1977a78bb7abae6b6b7f53882008c617 285 Pfam PF03641 Possible lysine decarboxylase 148 277 1.5E-31 T 22-04-2016 IPR031100 LOG family PNUC_RS07120 1977a78bb7abae6b6b7f53882008c617 285 SUPERFAMILY SSF102405 47 279 1.68E-50 T 22-04-2016 PNUC_RS07120 1977a78bb7abae6b6b7f53882008c617 285 PANTHER PTHR31223 110 283 1.3E-56 T 22-04-2016 PNUC_RS01390 75b9365992aed90fb3b3282e4ef8b094 490 PANTHER PTHR11699 1 488 3.6E-295 T 22-04-2016 PNUC_RS01390 75b9365992aed90fb3b3282e4ef8b094 490 Gene3D G3DSA:3.40.309.10 276 461 1.4E-71 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PNUC_RS01390 75b9365992aed90fb3b3282e4ef8b094 490 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 35 484 2.1E-211 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 PNUC_RS01390 75b9365992aed90fb3b3282e4ef8b094 490 Pfam PF00171 Aldehyde dehydrogenase family 26 486 1.2E-168 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PNUC_RS01390 75b9365992aed90fb3b3282e4ef8b094 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 290 301 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PNUC_RS01390 75b9365992aed90fb3b3282e4ef8b094 490 PANTHER PTHR11699:SF49 1 488 3.6E-295 T 22-04-2016 PNUC_RS01390 75b9365992aed90fb3b3282e4ef8b094 490 SUPERFAMILY SSF53720 11 489 1.7E-170 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PNUC_RS01390 75b9365992aed90fb3b3282e4ef8b094 490 Gene3D G3DSA:3.40.605.10 17 275 3.2E-101 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PNUC_RS06105 c944ba7df12d71901a0ec8f56e8fd95d 241 PANTHER PTHR30249 4 240 2.4E-70 T 22-04-2016 PNUC_RS06105 c944ba7df12d71901a0ec8f56e8fd95d 241 Pfam PF04172 LrgB-like family 25 238 7.3E-68 T 22-04-2016 IPR007300 CidB/LrgB family PNUC_RS06105 c944ba7df12d71901a0ec8f56e8fd95d 241 PANTHER PTHR30249:SF5 4 240 2.4E-70 T 22-04-2016 PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 PANTHER PTHR23135:SF5 1 467 5.6E-198 T 22-04-2016 PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 Pfam PF08245 Mur ligase middle domain 110 297 4.0E-27 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 407 8.3E-20 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 Gene3D G3DSA:3.40.1190.10 94 318 1.3E-79 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 469 3.7E-159 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 Pfam PF01225 Mur ligase family, catalytic domain 7 105 3.1E-27 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 SUPERFAMILY SSF53623 91 315 4.84E-69 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 Gene3D G3DSA:3.40.50.720 7 92 5.0E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 SUPERFAMILY SSF51984 6 92 1.83E-27 T 22-04-2016 PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 Gene3D G3DSA:3.90.190.20 319 474 7.0E-49 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 SUPERFAMILY SSF53244 316 472 9.34E-40 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 478 41.874 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00910 e8bc84607a54e36a2f2cba8e957791f3 478 PANTHER PTHR23135 1 467 5.6E-198 T 22-04-2016 PNUC_RS02960 7f88b5f2ed0ba2bdb00f276bf8c61d90 113 Gene3D G3DSA:1.10.10.10 6 78 3.1E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS02960 7f88b5f2ed0ba2bdb00f276bf8c61d90 113 Pfam PF12840 Helix-turn-helix domain 9 69 1.6E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS02960 7f88b5f2ed0ba2bdb00f276bf8c61d90 113 SUPERFAMILY SSF46785 5 87 5.0E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 SUPERFAMILY SSF53756 429 568 4.55E-6 T 22-04-2016 PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 Pfam PF13181 Tetratricopeptide repeat 143 174 6.6E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 Pfam PF13844 Glycosyl transferase family 41 292 436 1.2E-37 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 Pfam PF13844 Glycosyl transferase family 41 452 640 1.3E-38 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 Gene3D G3DSA:1.25.40.10 8 217 7.3E-39 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 SMART SM00028 109 142 9.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 SMART SM00028 7 40 19.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 SMART SM00028 75 108 3.2E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 SMART SM00028 143 176 2.1E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 SMART SM00028 177 210 5.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 Pfam PF13414 TPR repeat 82 123 2.1E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 PANTHER PTHR23083 14 209 6.0E-27 T 22-04-2016 PNUC_RS00665 cc204c3ebecfd284217deb4341a6dfde 660 SUPERFAMILY SSF48452 9 233 6.83E-27 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09880 8284517eb6cd063dbd921ea7eaab0036 660 SUPERFAMILY SSF51735 410 549 3.12E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS09880 8284517eb6cd063dbd921ea7eaab0036 660 Pfam PF00999 Sodium/hydrogen exchanger family 9 376 3.4E-66 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PNUC_RS09880 8284517eb6cd063dbd921ea7eaab0036 660 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 287 4.7E-73 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 PNUC_RS09880 8284517eb6cd063dbd921ea7eaab0036 660 Gene3D G3DSA:3.30.70.1450 585 656 6.1E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PNUC_RS09880 8284517eb6cd063dbd921ea7eaab0036 660 Pfam PF02254 TrkA-N domain 413 526 5.9E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PNUC_RS09880 8284517eb6cd063dbd921ea7eaab0036 660 Gene3D G3DSA:3.40.50.720 408 541 1.1E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS09880 8284517eb6cd063dbd921ea7eaab0036 660 SUPERFAMILY SSF116726 576 654 3.27E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PNUC_RS09880 8284517eb6cd063dbd921ea7eaab0036 660 PANTHER PTHR16254 8 567 3.8E-169 T 22-04-2016 PNUC_RS09880 8284517eb6cd063dbd921ea7eaab0036 660 Pfam PF02080 TrkA-C domain 587 659 1.8E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PNUC_RS09880 8284517eb6cd063dbd921ea7eaab0036 660 PANTHER PTHR16254:SF6 8 567 3.8E-169 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 SUPERFAMILY SSF81653 249 336 9.55E-21 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PANTHER PTHR24093 14 755 2.6E-237 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 ProSitePatterns PS01047 Heavy-metal-associated domain. 16 45 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 Gene3D G3DSA:2.70.150.10 189 337 3.3E-21 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 SUPERFAMILY SSF55008 9 80 2.23E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 Gene3D G3DSA:3.40.50.1000 407 451 6.0E-49 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 Gene3D G3DSA:3.40.50.1000 571 716 6.0E-49 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PANTHER PTHR24093:SF332 14 755 2.6E-237 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 Gene3D G3DSA:3.30.70.100 13 79 3.8E-22 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 Pfam PF00403 Heavy-metal-associated domain 13 75 9.1E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 Gene3D G3DSA:3.40.1110.10 452 570 2.8E-9 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 438 444 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 Pfam PF00122 E1-E2 ATPase 198 427 2.4E-59 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PRINTS PR00943 Copper-transporting ATPase signature 419 434 1.1E-9 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PRINTS PR00943 Copper-transporting ATPase signature 147 166 1.1E-9 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PRINTS PR00943 Copper-transporting ATPase signature 216 234 1.1E-9 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PRINTS PR00943 Copper-transporting ATPase signature 196 215 1.1E-9 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PRINTS PR00943 Copper-transporting ATPase signature 56 76 1.1E-9 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PRINTS PR00943 Copper-transporting ATPase signature 359 373 1.1E-9 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PRINTS PR00943 Copper-transporting ATPase signature 620 637 1.1E-9 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 Pfam PF00702 haloacid dehalogenase-like hydrolase 433 662 1.4E-37 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 SUPERFAMILY SSF56784 494 538 4.3E-50 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 SUPERFAMILY SSF56784 565 748 4.3E-50 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 SUPERFAMILY SSF56784 434 454 4.3E-50 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 SUPERFAMILY SSF81665 184 230 4.32E-13 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 SUPERFAMILY SSF81665 337 428 4.32E-13 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 162 750 1.3E-171 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 436 450 2.5E-24 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 590 600 2.5E-24 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 667 2.5E-24 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 286 300 2.5E-24 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 671 683 2.5E-24 T 22-04-2016 PNUC_RS07370 974e02d155c4fd7642261713d909dd37 758 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 198 737 3.0E-76 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 PNUC_RS05625 c2bf4da962733dcaa21d95adcaf0f043 67 Pfam PF01192 RNA polymerase Rpb6 8 56 1.1E-13 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS05625 c2bf4da962733dcaa21d95adcaf0f043 67 PANTHER PTHR34476 2 55 3.2E-13 T 22-04-2016 PNUC_RS05625 c2bf4da962733dcaa21d95adcaf0f043 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 60 15.43 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS05625 c2bf4da962733dcaa21d95adcaf0f043 67 Gene3D G3DSA:3.90.940.10 1 57 4.7E-9 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS05625 c2bf4da962733dcaa21d95adcaf0f043 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 55 1.1E-17 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS05625 c2bf4da962733dcaa21d95adcaf0f043 67 SUPERFAMILY SSF63562 1 63 3.31E-18 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS05625 c2bf4da962733dcaa21d95adcaf0f043 67 SMART SM01409 8 59 3.4E-13 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 Gene3D G3DSA:3.40.50.300 4 206 2.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 SUPERFAMILY SSF50447 152 301 1.19E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 SUPERFAMILY SSF52540 4 207 8.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 Gene3D G3DSA:3.30.70.240 402 481 1.3E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 SUPERFAMILY SSF54980 304 389 4.68E-13 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 Pfam PF03144 Elongation factor Tu domain 2 220 291 6.7E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 SMART SM00838 397 485 6.9E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 PANTHER PTHR23115 6 595 5.5E-277 T 22-04-2016 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 139 5.4E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 Pfam PF00009 Elongation factor Tu GTP binding domain 6 196 5.0E-55 T 22-04-2016 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 601 8.2E-285 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 PANTHER PTHR23115:SF14 6 595 5.5E-277 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 PRINTS PR00315 GTP-binding elongation factor signature 72 82 5.7E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 PRINTS PR00315 GTP-binding elongation factor signature 88 99 5.7E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 PRINTS PR00315 GTP-binding elongation factor signature 8 21 5.7E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 PRINTS PR00315 GTP-binding elongation factor signature 52 60 5.7E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 PRINTS PR00315 GTP-binding elongation factor signature 124 133 5.7E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 Gene3D G3DSA:2.40.30.10 207 305 2.4E-25 T 22-04-2016 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 Gene3D G3DSA:2.40.50.250 485 579 3.8E-41 T 22-04-2016 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 Gene3D G3DSA:3.30.70.870 306 401 2.9E-37 T 22-04-2016 PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 SUPERFAMILY SSF54980 400 514 3.31E-28 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PNUC_RS06430 cfd53a4ae8c7a613b4aa78ceef213d60 605 Pfam PF00679 Elongation factor G C-terminus 398 479 3.8E-24 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PNUC_RS02080 35ac35f74204f90778f51e2f6b4f334a 337 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 331 1.6E-111 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 PNUC_RS02080 35ac35f74204f90778f51e2f6b4f334a 337 SUPERFAMILY SSF53659 3 331 7.81E-101 T 22-04-2016 PNUC_RS02080 35ac35f74204f90778f51e2f6b4f334a 337 PANTHER PTHR30100:SF1 1 331 8.3E-131 T 22-04-2016 PNUC_RS02080 35ac35f74204f90778f51e2f6b4f334a 337 Pfam PF02504 Fatty acid synthesis protein 3 325 2.9E-103 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 PNUC_RS02080 35ac35f74204f90778f51e2f6b4f334a 337 PIRSF PIRSF002465 1 337 1.7E-126 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 PNUC_RS02080 35ac35f74204f90778f51e2f6b4f334a 337 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 337 150.287 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 PNUC_RS02080 35ac35f74204f90778f51e2f6b4f334a 337 Gene3D G3DSA:3.40.718.10 3 331 3.2E-130 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PNUC_RS02080 35ac35f74204f90778f51e2f6b4f334a 337 PANTHER PTHR30100 1 331 8.3E-131 T 22-04-2016 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 Gene3D G3DSA:3.90.10.10 299 314 1.6E-4 T 22-04-2016 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 Gene3D G3DSA:3.90.10.10 167 182 1.6E-4 T 22-04-2016 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 309 385 1.1E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 SUPERFAMILY SSF46626 309 405 1.4E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 Gene3D G3DSA:1.10.760.10 183 281 3.3E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 Gene3D G3DSA:1.10.760.10 28 127 1.8E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 Gene3D G3DSA:3.90.10.10 550 562 9.6E-4 T 22-04-2016 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 PANTHER PTHR35008:SF3 28 427 1.9E-178 T 22-04-2016 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 SUPERFAMILY SSF46626 439 529 7.06E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 SUPERFAMILY SSF46626 553 652 1.75E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 Pfam PF00034 Cytochrome c 31 127 1.1E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 Pfam PF00034 Cytochrome c 556 645 3.8E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 Gene3D G3DSA:1.10.760.10 450 529 1.1E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 Gene3D G3DSA:1.10.760.10 315 408 1.8E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 PANTHER PTHR35008 28 427 1.9E-178 T 22-04-2016 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 SUPERFAMILY SSF46626 176 291 9.43E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 SUPERFAMILY SSF46626 27 150 6.36E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04250 034e29bf756d36f4b3199bc32e4fbf8c 669 Gene3D G3DSA:1.10.760.10 563 649 7.8E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00935 8a9aa16de4323a8b83863976c1b1128b 166 Pfam PF08534 Redoxin 4 163 1.8E-37 T 22-04-2016 IPR013740 Redoxin GO:0016491 PNUC_RS00935 8a9aa16de4323a8b83863976c1b1128b 166 PANTHER PTHR10430 2 166 2.1E-79 T 22-04-2016 PNUC_RS00935 8a9aa16de4323a8b83863976c1b1128b 166 SUPERFAMILY SSF52833 1 166 6.16E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS00935 8a9aa16de4323a8b83863976c1b1128b 166 Gene3D G3DSA:3.40.30.10 1 166 8.1E-62 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS10120 77387cf0fc2df7f7e3542a5b580a050b 140 SUPERFAMILY SSF53062 1 136 2.62E-28 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 PNUC_RS10120 77387cf0fc2df7f7e3542a5b580a050b 140 Gene3D G3DSA:3.40.50.510 1 139 4.8E-36 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 PNUC_RS10120 77387cf0fc2df7f7e3542a5b580a050b 140 PANTHER PTHR33799 2 139 7.1E-23 T 22-04-2016 PNUC_RS10120 77387cf0fc2df7f7e3542a5b580a050b 140 Pfam PF03610 PTS system fructose IIA component 3 111 7.8E-20 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 SUPERFAMILY SSF55718 552 672 7.65E-30 T 22-04-2016 IPR003033 SCP2 sterol-binding domain PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 Pfam PF14864 Alkyl sulfatase C-terminal 550 671 3.4E-32 T 22-04-2016 IPR029229 Alkyl sulfatase, C-terminal PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 Pfam PF14863 Alkyl sulfatase dimerisation 403 541 5.0E-47 T 22-04-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 Pfam PF00753 Metallo-beta-lactamase superfamily 140 366 8.3E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 Gene3D G3DSA:3.30.1050.10 573 661 1.5E-10 T 22-04-2016 IPR003033 SCP2 sterol-binding domain PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 PANTHER PTHR11935:SF93 94 232 4.7E-161 T 22-04-2016 PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 PANTHER PTHR11935:SF93 256 491 4.7E-161 T 22-04-2016 PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 Gene3D G3DSA:1.25.40.10 476 524 1.5E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 Gene3D G3DSA:3.60.15.10 273 396 3.7E-35 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 Gene3D G3DSA:3.60.15.10 132 230 3.7E-35 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 PANTHER PTHR11935 94 232 4.7E-161 T 22-04-2016 PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 PANTHER PTHR11935 256 491 4.7E-161 T 22-04-2016 PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 SUPERFAMILY SSF56281 44 543 7.84E-141 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS05660 dad231a2717cf2bca382816ca5f43182 701 SMART SM00849 144 366 2.1E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS02615 44262e9c7ce6b417321beff1bac2541c 114 PRINTS PR01727 Prokaryotic integration host factor signature 49 64 3.3E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS02615 44262e9c7ce6b417321beff1bac2541c 114 PRINTS PR01727 Prokaryotic integration host factor signature 83 97 3.3E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS02615 44262e9c7ce6b417321beff1bac2541c 114 PRINTS PR01727 Prokaryotic integration host factor signature 67 80 3.3E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS02615 44262e9c7ce6b417321beff1bac2541c 114 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 9 99 1.6E-37 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 PNUC_RS02615 44262e9c7ce6b417321beff1bac2541c 114 PANTHER PTHR33175 9 99 2.5E-39 T 22-04-2016 PNUC_RS02615 44262e9c7ce6b417321beff1bac2541c 114 Pfam PF00216 Bacterial DNA-binding protein 10 98 5.9E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS02615 44262e9c7ce6b417321beff1bac2541c 114 Gene3D G3DSA:4.10.520.10 10 99 7.9E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PNUC_RS02615 44262e9c7ce6b417321beff1bac2541c 114 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 9 102 28.293 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 PNUC_RS02615 44262e9c7ce6b417321beff1bac2541c 114 SMART SM00411 9 99 1.4E-39 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS02615 44262e9c7ce6b417321beff1bac2541c 114 SUPERFAMILY SSF47729 9 99 3.83E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PNUC_RS02615 44262e9c7ce6b417321beff1bac2541c 114 PANTHER PTHR33175:SF5 9 99 2.5E-39 T 22-04-2016 PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 44.801 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 PIRSF PIRSF006641 1 364 4.0E-153 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 PANTHER PTHR23305:SF12 1 364 1.6E-204 T 22-04-2016 PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 Gene3D G3DSA:1.10.150.300 131 201 2.3E-24 T 22-04-2016 IPR023192 TGS-like domain PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 Gene3D G3DSA:3.10.20.30 268 364 4.1E-49 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 2.5E-155 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 Gene3D G3DSA:3.40.50.300 202 267 2.2E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 Gene3D G3DSA:3.40.50.300 4 130 2.2E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 PANTHER PTHR23305 1 364 1.6E-204 T 22-04-2016 PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 SUPERFAMILY SSF52540 3 302 2.27E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 SUPERFAMILY SSF81271 280 360 1.16E-35 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 4.0E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 PNUC_RS00775 c71fc69102edf8e5b8cb430f34bf2e2d 364 Pfam PF01926 50S ribosome-binding GTPase 5 120 3.1E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS08620 bd4884dd935d2e2a1e07cc765c5f592e 313 Gene3D G3DSA:3.40.50.300 3 229 3.4E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08620 bd4884dd935d2e2a1e07cc765c5f592e 313 PANTHER PTHR24220:SF305 6 229 3.5E-111 T 22-04-2016 PNUC_RS08620 bd4884dd935d2e2a1e07cc765c5f592e 313 SUPERFAMILY SSF52540 4 227 1.43E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08620 bd4884dd935d2e2a1e07cc765c5f592e 313 SMART SM00382 30 219 4.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS08620 bd4884dd935d2e2a1e07cc765c5f592e 313 Pfam PF00005 ABC transporter 21 163 3.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS08620 bd4884dd935d2e2a1e07cc765c5f592e 313 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS08620 bd4884dd935d2e2a1e07cc765c5f592e 313 PANTHER PTHR24220 6 229 3.5E-111 T 22-04-2016 PNUC_RS07060 b1e02ab3d51389b023c12390e644cda0 97 Pfam PF07045 Domain of unknown function (DUF1330) 8 93 3.1E-11 T 22-04-2016 IPR010753 Domain of unknown function DUF1330 PNUC_RS07060 b1e02ab3d51389b023c12390e644cda0 97 Gene3D G3DSA:3.30.70.900 7 93 9.9E-14 T 22-04-2016 PNUC_RS07060 b1e02ab3d51389b023c12390e644cda0 97 SUPERFAMILY SSF54909 1 93 5.09E-16 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel PNUC_RS07510 1a8d910a7d2803af79e50b4414f854ac 433 Pfam PF03583 Secretory lipase 139 427 1.2E-16 T 22-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 PNUC_RS07510 1a8d910a7d2803af79e50b4414f854ac 433 SUPERFAMILY SSF53474 86 243 1.2E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS07510 1a8d910a7d2803af79e50b4414f854ac 433 SUPERFAMILY SSF53474 271 423 1.2E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS07510 1a8d910a7d2803af79e50b4414f854ac 433 Gene3D G3DSA:3.40.50.1820 81 240 2.0E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS07510 1a8d910a7d2803af79e50b4414f854ac 433 Gene3D G3DSA:3.40.50.1820 319 418 2.0E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS07510 1a8d910a7d2803af79e50b4414f854ac 433 PIRSF PIRSF029171 1 430 1.3E-61 T 22-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 PNUC_RS07510 1a8d910a7d2803af79e50b4414f854ac 433 PANTHER PTHR34853 15 430 2.6E-12 T 22-04-2016 PNUC_RS03365 8d3ddd720a61e37e6bbe16e6f69fc041 287 Pfam PF02616 Segregation and condensation protein ScpA 66 281 1.2E-32 T 22-04-2016 IPR003768 Segregation and condensation protein A PNUC_RS03365 8d3ddd720a61e37e6bbe16e6f69fc041 287 Hamap MF_01805 Segregation and condensation protein A [scpA]. 49 283 21.068 T 22-04-2016 IPR003768 Segregation and condensation protein A PNUC_RS03365 8d3ddd720a61e37e6bbe16e6f69fc041 287 PANTHER PTHR33969:SF2 33 281 1.1E-73 T 22-04-2016 PNUC_RS03365 8d3ddd720a61e37e6bbe16e6f69fc041 287 PANTHER PTHR33969 33 281 1.1E-73 T 22-04-2016 PNUC_RS02880 27ac2a396fbc858100bb1c187c5f16e2 576 Gene3D G3DSA:3.40.50.970 2 179 5.3E-45 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS02880 27ac2a396fbc858100bb1c187c5f16e2 576 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 190 317 3.7E-27 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PNUC_RS02880 27ac2a396fbc858100bb1c187c5f16e2 576 SUPERFAMILY SSF52518 356 548 1.16E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS02880 27ac2a396fbc858100bb1c187c5f16e2 576 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 415 434 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PNUC_RS02880 27ac2a396fbc858100bb1c187c5f16e2 576 SUPERFAMILY SSF52467 180 343 1.58E-39 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PNUC_RS02880 27ac2a396fbc858100bb1c187c5f16e2 576 PANTHER PTHR18968 1 561 3.9E-257 T 22-04-2016 PNUC_RS02880 27ac2a396fbc858100bb1c187c5f16e2 576 Gene3D G3DSA:3.40.50.970 352 550 2.1E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS02880 27ac2a396fbc858100bb1c187c5f16e2 576 Gene3D G3DSA:3.40.50.1220 183 340 7.9E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PNUC_RS02880 27ac2a396fbc858100bb1c187c5f16e2 576 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 378 524 4.9E-32 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PNUC_RS02880 27ac2a396fbc858100bb1c187c5f16e2 576 SUPERFAMILY SSF52518 3 182 2.95E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS02880 27ac2a396fbc858100bb1c187c5f16e2 576 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 168 2.9E-39 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PNUC_RS02880 27ac2a396fbc858100bb1c187c5f16e2 576 PANTHER PTHR18968:SF12 1 561 3.9E-257 T 22-04-2016 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 SMART SM00316 612 695 1.2E-14 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 SMART SM00316 10 71 7.9 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 SMART SM00955 189 521 2.8E-175 T 22-04-2016 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 PANTHER PTHR23355:SF9 16 519 2.2E-233 T 22-04-2016 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 PANTHER PTHR23355:SF9 573 776 2.2E-233 T 22-04-2016 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 SMART SM00357 15 74 2.0E-14 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 TIGRFAM TIGR02063 RNase_R: ribonuclease R 15 522 8.7E-193 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 Pfam PF00773 RNB domain 189 521 1.8E-100 T 22-04-2016 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 ProSitePatterns PS01175 Ribonuclease II family signature. 488 512 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 Pfam PF08206 Ribonuclease B OB domain 16 73 9.5E-25 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 PANTHER PTHR23355 16 519 2.2E-233 T 22-04-2016 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 PANTHER PTHR23355 573 776 2.2E-233 T 22-04-2016 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 Pfam PF00575 S1 RNA binding domain 613 693 4.3E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 SUPERFAMILY SSF50249 467 522 1.8E-135 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 SUPERFAMILY SSF50249 572 612 1.8E-135 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 SUPERFAMILY SSF50249 116 431 1.8E-135 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 Gene3D G3DSA:2.40.50.140 614 695 1.4E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 12 522 3.6E-163 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 Hamap MF_01895 Ribonuclease R [rnr]. 2 695 53.528 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 Gene3D G3DSA:2.40.50.140 15 67 7.8E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 SUPERFAMILY SSF50249 614 694 7.01E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS06665 698eb2ddc86a2d622f443363bf91013f 795 SUPERFAMILY SSF50249 14 74 6.24E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 Gene3D G3DSA:3.40.50.620 20 316 7.9E-103 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.3E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.3E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 225 246 1.3E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 194 212 1.3E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 SUPERFAMILY SSF52374 2 324 1.23E-91 T 22-04-2016 PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 472 38.137 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 Pfam PF09190 DALR domain 354 412 1.9E-18 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 PANTHER PTHR10890 1 473 5.7E-215 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 472 1.0E-167 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 SMART SM00840 354 412 9.1E-23 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 324 9.9E-126 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 SUPERFAMILY SSF47323 327 471 9.29E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS04460 f19c54fa9edb554d6a0bb7e1b6bb4cc5 473 Gene3D G3DSA:1.20.120.640 318 400 1.1E-21 T 22-04-2016 PNUC_RS02410 8ceb94731c7b51cdfac8ef5aefcefe67 256 Pfam PF00027 Cyclic nucleotide-binding domain 43 128 1.3E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain PNUC_RS02410 8ceb94731c7b51cdfac8ef5aefcefe67 256 Gene3D G3DSA:1.10.10.10 164 237 7.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS02410 8ceb94731c7b51cdfac8ef5aefcefe67 256 SMART SM00419 180 228 4.9E-14 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PNUC_RS02410 8ceb94731c7b51cdfac8ef5aefcefe67 256 SUPERFAMILY SSF46785 159 238 5.85E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS02410 8ceb94731c7b51cdfac8ef5aefcefe67 256 PANTHER PTHR24567 13 237 4.4E-69 T 22-04-2016 PNUC_RS02410 8ceb94731c7b51cdfac8ef5aefcefe67 256 SUPERFAMILY SSF51206 16 156 9.95E-30 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like PNUC_RS02410 8ceb94731c7b51cdfac8ef5aefcefe67 256 PANTHER PTHR24567:SF28 13 237 4.4E-69 T 22-04-2016 PNUC_RS02410 8ceb94731c7b51cdfac8ef5aefcefe67 256 Pfam PF13545 Crp-like helix-turn-helix domain 161 234 7.1E-19 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PNUC_RS02410 8ceb94731c7b51cdfac8ef5aefcefe67 256 SMART SM00100 23 141 3.7E-13 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain PNUC_RS02410 8ceb94731c7b51cdfac8ef5aefcefe67 256 Gene3D G3DSA:2.60.120.10 13 163 3.0E-26 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS02410 8ceb94731c7b51cdfac8ef5aefcefe67 256 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 202 2.93E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PNUC_RS02410 8ceb94731c7b51cdfac8ef5aefcefe67 256 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 202 217 2.93E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PNUC_RS07305 fe7acba5f4c7ead31c5a8f03f542c2be 353 PANTHER PTHR30074:SF2 83 353 8.5E-68 T 22-04-2016 PNUC_RS07305 fe7acba5f4c7ead31c5a8f03f542c2be 353 SUPERFAMILY SSF81342 144 352 8.63E-40 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PNUC_RS07305 fe7acba5f4c7ead31c5a8f03f542c2be 353 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 146 352 2.1E-54 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 PNUC_RS07305 fe7acba5f4c7ead31c5a8f03f542c2be 353 Pfam PF01292 Prokaryotic cytochrome b561 148 331 2.7E-16 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PNUC_RS07305 fe7acba5f4c7ead31c5a8f03f542c2be 353 PANTHER PTHR30074 83 353 8.5E-68 T 22-04-2016 PNUC_RS07305 fe7acba5f4c7ead31c5a8f03f542c2be 353 Gene3D G3DSA:1.20.950.20 143 352 1.3E-57 T 22-04-2016 PNUC_RS10095 fac9f123f2b453aa80c359ff4406cfb8 229 SUPERFAMILY SSF53254 1 228 1.96E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily PNUC_RS10095 fac9f123f2b453aa80c359ff4406cfb8 229 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 PNUC_RS10095 fac9f123f2b453aa80c359ff4406cfb8 229 PANTHER PTHR11931 1 228 9.5E-145 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 PNUC_RS10095 fac9f123f2b453aa80c359ff4406cfb8 229 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 228 5.2E-110 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 PNUC_RS10095 fac9f123f2b453aa80c359ff4406cfb8 229 Gene3D G3DSA:3.40.50.1240 1 226 1.3E-96 T 22-04-2016 IPR029033 Histidine phosphatase superfamily PNUC_RS10095 fac9f123f2b453aa80c359ff4406cfb8 229 SMART SM00855 3 189 2.6E-28 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PNUC_RS10095 fac9f123f2b453aa80c359ff4406cfb8 229 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 123 1.8E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PNUC_RS10095 fac9f123f2b453aa80c359ff4406cfb8 229 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 132 218 1.7E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PNUC_RS10095 fac9f123f2b453aa80c359ff4406cfb8 229 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 45.119 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 PNUC_RS05840 60cc864e023b8278188eb77d9522f0c9 434 PANTHER PTHR30629:SF2 27 424 5.4E-53 T 22-04-2016 PNUC_RS05840 60cc864e023b8278188eb77d9522f0c9 434 SUPERFAMILY SSF56349 110 410 5.0E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PNUC_RS05840 60cc864e023b8278188eb77d9522f0c9 434 Gene3D G3DSA:1.10.150.130 110 215 1.7E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal PNUC_RS05840 60cc864e023b8278188eb77d9522f0c9 434 PANTHER PTHR30629 27 424 5.4E-53 T 22-04-2016 PNUC_RS05840 60cc864e023b8278188eb77d9522f0c9 434 Pfam PF13356 Domain of unknown function (DUF4102) 25 95 1.6E-10 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 PNUC_RS05840 60cc864e023b8278188eb77d9522f0c9 434 Gene3D G3DSA:1.10.443.10 244 408 1.3E-18 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS05840 60cc864e023b8278188eb77d9522f0c9 434 Pfam PF00589 Phage integrase family 243 399 2.3E-15 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 Pfam PF00344 SecY translocase 78 420 6.2E-116 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 SUPERFAMILY SSF103491 17 426 3.27E-130 T 22-04-2016 IPR023201 SecY subunit domain PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 PIRSF PIRSF004557 8 443 3.4E-121 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 ProSitePatterns PS00755 Protein secY signature 1. 78 97 - T 22-04-2016 IPR030659 SecY conserved site PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 Gene3D G3DSA:1.10.3370.10 17 440 1.5E-160 T 22-04-2016 IPR023201 SecY subunit domain PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 PANTHER PTHR10906 20 442 5.7E-209 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 ProSitePatterns PS00756 Protein secY signature 2. 172 189 - T 22-04-2016 IPR030659 SecY conserved site PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 PANTHER PTHR10906:SF2 20 442 5.7E-209 T 22-04-2016 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 318 340 7.0E-93 T 22-04-2016 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 25 43 7.0E-93 T 22-04-2016 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 153 178 7.0E-93 T 22-04-2016 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 373 391 7.0E-93 T 22-04-2016 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 271 290 7.0E-93 T 22-04-2016 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 77 97 7.0E-93 T 22-04-2016 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 405 423 7.0E-93 T 22-04-2016 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 118 141 7.0E-93 T 22-04-2016 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 179 202 7.0E-93 T 22-04-2016 PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 Hamap MF_01465 Protein translocase subunit SecY [secY]. 12 436 28.996 T 22-04-2016 IPR026593 Protein translocase subunit SecY PNUC_RS00415 3971376295da95dbd090617c3875e07c 445 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 22 432 1.7E-126 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 Pfam PF00570 HRDC domain 538 604 3.6E-21 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 Pfam PF00271 Helicase conserved C-terminal domain 221 327 2.4E-15 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 SUPERFAMILY SSF52540 5 191 1.69E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 Pfam PF16124 RecQ zinc-binding 339 401 2.5E-20 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 459 6.8E-157 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 SMART SM00487 13 211 2.0E-21 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 SMART SM00490 246 327 4.6E-26 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 SMART SM00956 408 512 1.0E-50 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 PANTHER PTHR13710 2 611 1.7E-280 T 22-04-2016 PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 SUPERFAMILY SSF47819 536 609 7.63E-22 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 Pfam PF09382 RQC domain 403 516 6.6E-38 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 Pfam PF00270 DEAD/DEAH box helicase 20 180 2.5E-15 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 Gene3D G3DSA:1.10.10.10 341 516 6.2E-58 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 PANTHER PTHR13710:SF81 2 611 1.7E-280 T 22-04-2016 PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 SMART SM00341 534 612 2.3E-12 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 SUPERFAMILY SSF52540 203 453 2.12E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 Gene3D G3DSA:3.40.50.300 6 201 2.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 Gene3D G3DSA:3.40.50.300 202 340 1.0E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 Gene3D G3DSA:1.10.150.80 537 606 1.5E-19 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PNUC_RS03630 07f68c9cdb03830c61881b378bb31e14 612 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 5 606 9.4E-248 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 PANTHER PTHR24322 153 185 7.4E-71 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 PANTHER PTHR24322 7 137 7.4E-71 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.3E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.3E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.3E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 PANTHER PTHR24322:SF392 153 185 7.4E-71 T 22-04-2016 PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 PANTHER PTHR24322:SF392 7 137 7.4E-71 T 22-04-2016 PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 Pfam PF00106 short chain dehydrogenase 4 193 6.5E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 SUPERFAMILY SSF51735 4 237 5.43E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 Gene3D G3DSA:3.40.50.720 3 238 1.6E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01955 a7ad48db6ad4ed8c18d5823e755a89c6 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PNUC_RS03765 5f1339d7ece60462b4335210db75da64 198 SUPERFAMILY SSF52540 10 172 5.4E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03765 5f1339d7ece60462b4335210db75da64 198 Gene3D G3DSA:3.40.50.300 11 170 1.7E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03765 5f1339d7ece60462b4335210db75da64 198 Pfam PF13671 AAA domain 12 167 3.5E-19 T 22-04-2016 PNUC_RS09785 70c165bed7ae4d59faf4eed6b346e546 140 SUPERFAMILY SSF82784 1 137 6.67E-39 T 22-04-2016 IPR003718 OsmC/Ohr family PNUC_RS09785 70c165bed7ae4d59faf4eed6b346e546 140 Gene3D G3DSA:2.20.25.10 1 36 2.4E-17 T 22-04-2016 PNUC_RS09785 70c165bed7ae4d59faf4eed6b346e546 140 Pfam PF02566 OsmC-like protein 36 132 1.1E-18 T 22-04-2016 IPR003718 OsmC/Ohr family PNUC_RS09785 70c165bed7ae4d59faf4eed6b346e546 140 Gene3D G3DSA:3.30.300.20 41 138 1.4E-41 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PNUC_RS09785 70c165bed7ae4d59faf4eed6b346e546 140 PANTHER PTHR34352 1 140 3.2E-44 T 22-04-2016 PNUC_RS07665 2974f20b13ed8563ddf5c803073f7c1f 801 PANTHER PTHR30619:SF2 21 772 2.7E-149 T 22-04-2016 PNUC_RS07665 2974f20b13ed8563ddf5c803073f7c1f 801 Gene3D G3DSA:3.60.15.10 717 762 1.9E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS07665 2974f20b13ed8563ddf5c803073f7c1f 801 Gene3D G3DSA:3.60.15.10 525 685 1.9E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS07665 2974f20b13ed8563ddf5c803073f7c1f 801 PANTHER PTHR30619 21 772 2.7E-149 T 22-04-2016 PNUC_RS07665 2974f20b13ed8563ddf5c803073f7c1f 801 Pfam PF03772 Competence protein 208 487 2.6E-69 T 22-04-2016 IPR004477 ComEC/Rec2-related protein PNUC_RS07665 2974f20b13ed8563ddf5c803073f7c1f 801 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 115 771 8.6E-100 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 PNUC_RS07665 2974f20b13ed8563ddf5c803073f7c1f 801 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 229 424 1.3E-24 T 22-04-2016 IPR004477 ComEC/Rec2-related protein PNUC_RS07665 2974f20b13ed8563ddf5c803073f7c1f 801 SUPERFAMILY SSF56281 523 784 8.94E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS07665 2974f20b13ed8563ddf5c803073f7c1f 801 Pfam PF00753 Metallo-beta-lactamase superfamily 534 608 4.0E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS07665 2974f20b13ed8563ddf5c803073f7c1f 801 Pfam PF13567 Domain of unknown function (DUF4131) 6 165 4.8E-25 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 PNUC_RS02735 bf5ca4c90185f59a90c4b573e09cf5a8 195 Pfam PF00929 Exonuclease 20 181 6.8E-30 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PNUC_RS02735 bf5ca4c90185f59a90c4b573e09cf5a8 195 Hamap MF_00045 Oligoribonuclease [orn]. 14 192 40.533 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 PNUC_RS02735 bf5ca4c90185f59a90c4b573e09cf5a8 195 PANTHER PTHR11046 1 190 3.2E-91 T 22-04-2016 PNUC_RS02735 bf5ca4c90185f59a90c4b573e09cf5a8 195 Gene3D G3DSA:3.30.420.10 17 189 1.3E-69 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS02735 bf5ca4c90185f59a90c4b573e09cf5a8 195 SUPERFAMILY SSF53098 15 190 2.97E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS02735 bf5ca4c90185f59a90c4b573e09cf5a8 195 PANTHER PTHR11046:SF1 1 190 3.2E-91 T 22-04-2016 PNUC_RS02735 bf5ca4c90185f59a90c4b573e09cf5a8 195 SMART SM00479 18 191 1.7E-18 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PNUC_RS07000 fbf7f211d0f4710b2f7979bdc6a63d7c 340 SUPERFAMILY SSF46785 21 99 1.7E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS07000 fbf7f211d0f4710b2f7979bdc6a63d7c 340 SUPERFAMILY SSF53850 106 295 5.69E-12 T 22-04-2016 PNUC_RS07000 fbf7f211d0f4710b2f7979bdc6a63d7c 340 Pfam PF12727 PBP superfamily domain 143 315 6.0E-47 T 22-04-2016 IPR024370 PBP domain PNUC_RS07000 fbf7f211d0f4710b2f7979bdc6a63d7c 340 Gene3D G3DSA:3.40.190.10 196 282 2.5E-11 T 22-04-2016 PNUC_RS07000 fbf7f211d0f4710b2f7979bdc6a63d7c 340 Gene3D G3DSA:1.10.10.10 26 124 8.5E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS07000 fbf7f211d0f4710b2f7979bdc6a63d7c 340 PANTHER PTHR38431 143 339 2.4E-23 T 22-04-2016 PNUC_RS07000 fbf7f211d0f4710b2f7979bdc6a63d7c 340 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 28 83 3.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS10465 eef4f6be82ff7ee33512b3092ba3dd16 174 PIRSF PIRSF018472 7 167 8.3E-31 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type PNUC_RS10465 eef4f6be82ff7ee33512b3092ba3dd16 174 Pfam PF04093 rod shape-determining protein MreD 15 153 8.6E-14 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PNUC_RS10465 eef4f6be82ff7ee33512b3092ba3dd16 174 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 14 159 2.6E-21 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PNUC_RS04180 dbe4b9bfbdb9065d84e66ea2455da8d3 150 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 4 150 5.9E-50 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY PNUC_RS04180 dbe4b9bfbdb9065d84e66ea2455da8d3 150 Pfam PF13501 Sulfur oxidation protein SoxY 48 148 1.7E-32 T 22-04-2016 IPR032711 Ig-like SoxY domain PNUC_RS04180 dbe4b9bfbdb9065d84e66ea2455da8d3 150 PIRSF PIRSF010312 1 150 1.3E-45 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY PNUC_RS08150 1af3c27166600bf06fb1c78648ea11ef 625 PANTHER PTHR24095 1 625 0.0 T 22-04-2016 PNUC_RS08150 1af3c27166600bf06fb1c78648ea11ef 625 Gene3D G3DSA:3.30.300.30 496 602 6.7E-26 T 22-04-2016 PNUC_RS08150 1af3c27166600bf06fb1c78648ea11ef 625 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 1 622 0.0 T 22-04-2016 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747|UniPathway: UPA00946 PNUC_RS08150 1af3c27166600bf06fb1c78648ea11ef 625 SUPERFAMILY SSF56801 3 621 2.62E-163 T 22-04-2016 PNUC_RS08150 1af3c27166600bf06fb1c78648ea11ef 625 Gene3D G3DSA:2.30.38.10 413 495 5.8E-6 T 22-04-2016 PNUC_RS08150 1af3c27166600bf06fb1c78648ea11ef 625 Pfam PF00501 AMP-binding enzyme 60 501 3.2E-84 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PNUC_RS08150 1af3c27166600bf06fb1c78648ea11ef 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 57 1.4E-24 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 PNUC_RS08150 1af3c27166600bf06fb1c78648ea11ef 625 Gene3D G3DSA:3.40.50.980 242 397 5.0E-28 T 22-04-2016 PNUC_RS08150 1af3c27166600bf06fb1c78648ea11ef 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 587 6.5E-23 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PNUC_RS08150 1af3c27166600bf06fb1c78648ea11ef 625 Gene3D G3DSA:3.40.50.980 54 241 3.8E-39 T 22-04-2016 PNUC_RS08150 1af3c27166600bf06fb1c78648ea11ef 625 PANTHER PTHR24095:SF165 1 625 0.0 T 22-04-2016 PNUC_RS08150 1af3c27166600bf06fb1c78648ea11ef 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 22-04-2016 IPR020845 AMP-binding, conserved site PNUC_RS09945 f87b3c6e1c2a06b8f9ff91d5bec9e335 294 SUPERFAMILY SSF54211 8 161 2.43E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS09945 f87b3c6e1c2a06b8f9ff91d5bec9e335 294 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 8 261 6.4E-71 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS09945 f87b3c6e1c2a06b8f9ff91d5bec9e335 294 Gene3D G3DSA:3.30.70.890 166 290 6.5E-31 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain PNUC_RS09945 f87b3c6e1c2a06b8f9ff91d5bec9e335 294 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 9 281 31.365 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS09945 f87b3c6e1c2a06b8f9ff91d5bec9e335 294 Pfam PF08544 GHMP kinases C terminal 208 259 1.3E-5 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain PNUC_RS09945 f87b3c6e1c2a06b8f9ff91d5bec9e335 294 SUPERFAMILY SSF55060 165 287 3.6E-21 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain PNUC_RS09945 f87b3c6e1c2a06b8f9ff91d5bec9e335 294 PANTHER PTHR20861 9 280 3.0E-75 T 22-04-2016 PNUC_RS09945 f87b3c6e1c2a06b8f9ff91d5bec9e335 294 Gene3D G3DSA:3.30.230.10 10 163 1.5E-54 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PNUC_RS09945 f87b3c6e1c2a06b8f9ff91d5bec9e335 294 Pfam PF00288 GHMP kinases N terminal domain 92 148 8.9E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 PNUC_RS09945 f87b3c6e1c2a06b8f9ff91d5bec9e335 294 PANTHER PTHR20861:SF2 9 280 3.0E-75 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS09945 f87b3c6e1c2a06b8f9ff91d5bec9e335 294 PIRSF PIRSF010376 7 290 4.5E-83 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS03785 f1713c1f46e560fe793dc065094d6a59 515 PANTHER PTHR30536 1 515 1.0E-197 T 22-04-2016 PNUC_RS03785 f1713c1f46e560fe793dc065094d6a59 515 SMART SM00858 20 89 7.2E-9 T 22-04-2016 IPR013974 SAF domain PNUC_RS03785 f1713c1f46e560fe793dc065094d6a59 515 PANTHER PTHR30536:SF5 1 515 1.0E-197 T 22-04-2016 PNUC_RS03785 f1713c1f46e560fe793dc065094d6a59 515 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 116 513 1.1E-153 T 22-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 PNUC_RS03785 f1713c1f46e560fe793dc065094d6a59 515 Pfam PF08666 SAF domain 20 89 1.0E-5 T 22-04-2016 IPR013974 SAF domain PNUC_RS05535 1c8701fa2e35bc010fd48fdea650ad0b 215 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 7 212 36.313 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PNUC_RS05535 1c8701fa2e35bc010fd48fdea650ad0b 215 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 8 212 1.1E-65 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PNUC_RS05535 1c8701fa2e35bc010fd48fdea650ad0b 215 Pfam PF02666 Phosphatidylserine decarboxylase 44 206 2.4E-30 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PNUC_RS05535 1c8701fa2e35bc010fd48fdea650ad0b 215 PANTHER PTHR35809 1 215 2.7E-61 T 22-04-2016 PNUC_RS03115 ca3e1c25b8ea4ffcaa20d50a376e89be 176 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 17 150 4.5E-36 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PNUC_RS03115 ca3e1c25b8ea4ffcaa20d50a376e89be 176 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 40 161 7.2E-33 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PNUC_RS03115 ca3e1c25b8ea4ffcaa20d50a376e89be 176 SUPERFAMILY SSF52540 43 149 2.77E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03115 ca3e1c25b8ea4ffcaa20d50a376e89be 176 PANTHER PTHR33540 11 172 2.2E-39 T 22-04-2016 PNUC_RS03115 ca3e1c25b8ea4ffcaa20d50a376e89be 176 PANTHER PTHR33540:SF2 11 172 2.2E-39 T 22-04-2016 PNUC_RS03115 ca3e1c25b8ea4ffcaa20d50a376e89be 176 Gene3D G3DSA:3.40.50.300 12 171 7.7E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01610 503fa05316c0ad779bdb64ac4932d9f7 268 Pfam PF00535 Glycosyl transferase family 2 11 165 6.7E-31 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PNUC_RS01610 503fa05316c0ad779bdb64ac4932d9f7 268 PANTHER PTHR22916 7 212 8.4E-62 T 22-04-2016 PNUC_RS01610 503fa05316c0ad779bdb64ac4932d9f7 268 PANTHER PTHR22916:SF4 7 212 8.4E-62 T 22-04-2016 PNUC_RS01610 503fa05316c0ad779bdb64ac4932d9f7 268 SUPERFAMILY SSF53448 8 212 4.02E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS01610 503fa05316c0ad779bdb64ac4932d9f7 268 Gene3D G3DSA:3.90.550.10 8 224 3.3E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS02595 17567bf2bf8a8816f044ac2a9dcf72fc 293 Pfam PF02153 Prephenate dehydrogenase 25 281 3.9E-64 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 PNUC_RS02595 17567bf2bf8a8816f044ac2a9dcf72fc 293 Gene3D G3DSA:3.40.50.720 12 188 5.1E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02595 17567bf2bf8a8816f044ac2a9dcf72fc 293 PANTHER PTHR21363:SF0 1 290 5.6E-61 T 22-04-2016 PNUC_RS02595 17567bf2bf8a8816f044ac2a9dcf72fc 293 SUPERFAMILY SSF51735 13 178 1.38E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02595 17567bf2bf8a8816f044ac2a9dcf72fc 293 PANTHER PTHR21363 1 290 5.6E-61 T 22-04-2016 PNUC_RS02595 17567bf2bf8a8816f044ac2a9dcf72fc 293 SUPERFAMILY SSF48179 184 290 3.06E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 Pfam PF00490 Delta-aminolevulinic acid dehydratase 16 335 6.2E-140 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 SMART SM01004 13 337 9.5E-240 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 PANTHER PTHR11458 6 338 2.9E-182 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 Gene3D G3DSA:3.20.20.70 11 339 3.4E-150 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 PIRSF PIRSF001415 7 340 4.8E-147 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 SUPERFAMILY SSF51569 9 338 1.76E-142 T 22-04-2016 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 256 268 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 256 272 2.5E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 311 330 2.5E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 202 221 2.5E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 133 147 2.5E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 164 183 2.5E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS00470 f4498a07b5122013a41b381e581b16b1 341 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 281 296 2.5E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS07465 bbd41adee0716db8553de53bdd3573ed 150 PANTHER PTHR30308 3 150 2.8E-67 T 22-04-2016 PNUC_RS07465 bbd41adee0716db8553de53bdd3573ed 150 SUPERFAMILY SSF74982 3 127 1.96E-48 T 22-04-2016 IPR023620 Small protein B PNUC_RS07465 bbd41adee0716db8553de53bdd3573ed 150 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 1.0E-55 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 PNUC_RS07465 bbd41adee0716db8553de53bdd3573ed 150 Hamap MF_00023 SsrA-binding protein [smpB]. 1 150 66.244 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 PNUC_RS07465 bbd41adee0716db8553de53bdd3573ed 150 PANTHER PTHR30308:SF2 3 150 2.8E-67 T 22-04-2016 PNUC_RS07465 bbd41adee0716db8553de53bdd3573ed 150 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 142 2.0E-51 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 PNUC_RS07465 bbd41adee0716db8553de53bdd3573ed 150 Pfam PF01668 SmpB protein 3 64 1.1E-26 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 PNUC_RS07465 bbd41adee0716db8553de53bdd3573ed 150 Gene3D G3DSA:2.40.280.10 3 122 6.6E-47 T 22-04-2016 IPR023620 Small protein B PNUC_RS07465 bbd41adee0716db8553de53bdd3573ed 150 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 1.9E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 91 103 1.9E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 385 398 1.9E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 89 1.9E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 204 217 1.9E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 302 405 1.1E-18 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 PRINTS PR01181 Diaminopimelate decarboxylase signature 395 417 2.0E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 PRINTS PR01181 Diaminopimelate decarboxylase signature 89 106 2.0E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 PRINTS PR01181 Diaminopimelate decarboxylase signature 178 187 2.0E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 PRINTS PR01181 Diaminopimelate decarboxylase signature 315 333 2.0E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 242 255 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 SUPERFAMILY SSF50621 276 428 2.3E-51 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 PANTHER PTHR11482 14 431 4.1E-165 T 22-04-2016 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 Gene3D G3DSA:3.20.20.10 46 279 3.0E-76 T 22-04-2016 IPR029066 PLP-binding barrel PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 62 297 1.5E-70 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 SUPERFAMILY SSF51419 36 299 1.89E-78 T 22-04-2016 IPR029066 PLP-binding barrel PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 PANTHER PTHR11482:SF5 14 431 4.1E-165 T 22-04-2016 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 25 428 41.07 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 Gene3D G3DSA:2.40.37.10 280 429 1.7E-48 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PNUC_RS00485 5963bf01c39410e07473efd762a885cd 432 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 16 427 3.1E-156 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS02765 f8ae76edb7ec2ad0f9181c03c8809057 221 Pfam PF02230 Phospholipase/Carboxylesterase 12 216 6.2E-51 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 PNUC_RS02765 f8ae76edb7ec2ad0f9181c03c8809057 221 Gene3D G3DSA:3.40.50.1820 7 217 2.1E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS02765 f8ae76edb7ec2ad0f9181c03c8809057 221 PANTHER PTHR10655 7 221 1.8E-69 T 22-04-2016 PNUC_RS02765 f8ae76edb7ec2ad0f9181c03c8809057 221 PANTHER PTHR10655:SF17 7 221 1.8E-69 T 22-04-2016 PNUC_RS02765 f8ae76edb7ec2ad0f9181c03c8809057 221 SUPERFAMILY SSF53474 10 217 2.92E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS08810 5f8f67a3395a3572c7598c10490d9304 467 Gene3D G3DSA:1.10.443.10 300 429 3.6E-13 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS08810 5f8f67a3395a3572c7598c10490d9304 467 Gene3D G3DSA:1.10.443.10 191 255 3.6E-13 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS08810 5f8f67a3395a3572c7598c10490d9304 467 Gene3D G3DSA:1.10.150.130 90 169 8.4E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal PNUC_RS08810 5f8f67a3395a3572c7598c10490d9304 467 SUPERFAMILY SSF56349 87 254 9.42E-23 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PNUC_RS08810 5f8f67a3395a3572c7598c10490d9304 467 SUPERFAMILY SSF56349 300 428 9.42E-23 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PNUC_RS01060 90fb6436ef6497644bd332c8fbbd13fd 190 Pfam PF08750 CNP1-like family 39 169 3.2E-41 T 22-04-2016 IPR014861 Uncharacterised domain CNP1 PNUC_RS00730 5867ff2dd3cd60230ee241c448aacbe1 102 Gene3D G3DSA:3.40.30.10 7 101 2.1E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS00730 5867ff2dd3cd60230ee241c448aacbe1 102 SUPERFAMILY SSF52833 1 101 1.64E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS00730 5867ff2dd3cd60230ee241c448aacbe1 102 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 2.5E-45 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related PNUC_RS00730 5867ff2dd3cd60230ee241c448aacbe1 102 PIRSF PIRSF005894 1 102 6.5E-47 T 22-04-2016 IPR014434 Monothiol glutaredoxin PNUC_RS00730 5867ff2dd3cd60230ee241c448aacbe1 102 Pfam PF00462 Glutaredoxin 16 81 1.5E-18 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PNUC_RS00730 5867ff2dd3cd60230ee241c448aacbe1 102 PANTHER PTHR10293 1 101 8.6E-58 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related PNUC_RS02480 56ed7907dc62b1a2ae3739ba594168ef 150 PIRSF PIRSF000027 9 150 8.9E-43 T 22-04-2016 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 PNUC_RS02480 56ed7907dc62b1a2ae3739ba594168ef 150 PRINTS PR00608 Class II cytochrome C signature 137 148 3.5E-7 T 22-04-2016 IPR015984 Cytochrome c prime, subgroup PNUC_RS02480 56ed7907dc62b1a2ae3739ba594168ef 150 PRINTS PR00608 Class II cytochrome C signature 114 137 3.5E-7 T 22-04-2016 IPR015984 Cytochrome c prime, subgroup PNUC_RS02480 56ed7907dc62b1a2ae3739ba594168ef 150 SUPERFAMILY SSF47175 26 148 3.24E-41 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 PNUC_RS02480 56ed7907dc62b1a2ae3739ba594168ef 150 Pfam PF01322 Cytochrome C' 32 148 2.8E-38 T 22-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 PNUC_RS02480 56ed7907dc62b1a2ae3739ba594168ef 150 Gene3D G3DSA:1.20.120.10 25 150 9.5E-47 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 PNUC_RS01640 46a9dba174abd0914440b263e92aded9 357 SUPERFAMILY SSF53383 4 356 8.87E-120 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS01640 46a9dba174abd0914440b263e92aded9 357 PANTHER PTHR30244 1 357 1.0E-150 T 22-04-2016 PNUC_RS01640 46a9dba174abd0914440b263e92aded9 357 Gene3D G3DSA:3.90.1150.10 245 357 5.8E-30 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS01640 46a9dba174abd0914440b263e92aded9 357 PANTHER PTHR30244:SF16 1 357 1.0E-150 T 22-04-2016 PNUC_RS01640 46a9dba174abd0914440b263e92aded9 357 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 356 1.4E-124 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PNUC_RS01640 46a9dba174abd0914440b263e92aded9 357 Gene3D G3DSA:3.40.640.10 4 243 4.3E-98 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS01640 46a9dba174abd0914440b263e92aded9 357 PIRSF PIRSF000390 1 357 1.6E-119 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 PANTHER PTHR10520:SF7 1 276 9.1E-139 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 Gene3D G3DSA:3.30.70.260 2 81 2.0E-21 T 22-04-2016 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 Gene3D G3DSA:3.40.50.170 86 275 1.0E-52 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 PIRSF PIRSF036480 3 283 5.2E-103 T 22-04-2016 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 282 1.3E-97 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 PANTHER PTHR10520 1 276 9.1E-139 T 22-04-2016 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 3 282 45.53 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 8 34 2.3E-44 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 2.3E-44 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 40 52 2.3E-44 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 109 136 2.3E-44 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 87 109 2.3E-44 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 2.3E-44 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 Pfam PF00551 Formyl transferase 86 264 2.3E-33 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 SUPERFAMILY SSF55021 5 82 3.12E-14 T 22-04-2016 PNUC_RS06065 7af7fd34ff7c114d3595c0c3ea579f17 284 SUPERFAMILY SSF53328 86 283 1.57E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS08660 162ce0d68b4efbc21977ae1478e0e4e8 426 PANTHER PTHR23508 6 416 9.5E-258 T 22-04-2016 PNUC_RS08660 162ce0d68b4efbc21977ae1478e0e4e8 426 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 21 409 7.3E-139 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 PNUC_RS08660 162ce0d68b4efbc21977ae1478e0e4e8 426 PANTHER PTHR23508:SF12 6 416 9.5E-258 T 22-04-2016 PNUC_RS08660 162ce0d68b4efbc21977ae1478e0e4e8 426 SUPERFAMILY SSF103473 8 420 2.49E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS08660 162ce0d68b4efbc21977ae1478e0e4e8 426 Pfam PF00083 Sugar (and other) transporter 15 212 1.8E-26 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PNUC_RS08660 162ce0d68b4efbc21977ae1478e0e4e8 426 Gene3D G3DSA:1.20.1250.20 233 418 7.7E-20 T 22-04-2016 PNUC_RS08660 162ce0d68b4efbc21977ae1478e0e4e8 426 Gene3D G3DSA:1.20.1250.20 15 212 4.3E-23 T 22-04-2016 PNUC_RS08660 162ce0d68b4efbc21977ae1478e0e4e8 426 Pfam PF07690 Major Facilitator Superfamily 249 420 1.5E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS08660 162ce0d68b4efbc21977ae1478e0e4e8 426 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PNUC_RS06835 3751fcfa5aace144b74e1ed4f85d6142 167 Pfam PF09351 Domain of unknown function (DUF1993) 5 165 1.8E-64 T 22-04-2016 IPR018531 Domain of unknown function DUF1993 PNUC_RS06835 3751fcfa5aace144b74e1ed4f85d6142 167 Gene3D G3DSA:1.20.120.450 1 166 1.1E-72 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase PNUC_RS06835 3751fcfa5aace144b74e1ed4f85d6142 167 SUPERFAMILY SSF109854 4 166 3.75E-63 T 22-04-2016 PNUC_RS06835 3751fcfa5aace144b74e1ed4f85d6142 167 PANTHER PTHR36922:SF1 1 166 1.0E-72 T 22-04-2016 PNUC_RS06835 3751fcfa5aace144b74e1ed4f85d6142 167 PANTHER PTHR36922 1 166 1.0E-72 T 22-04-2016 PNUC_RS08515 a115734cbe5b14a44fb9fb65278cdca9 266 Gene3D G3DSA:1.20.120.530 104 241 2.1E-28 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PNUC_RS08515 a115734cbe5b14a44fb9fb65278cdca9 266 Pfam PF07729 FCD domain 110 233 4.9E-24 T 22-04-2016 IPR011711 GntR, C-terminal PNUC_RS08515 a115734cbe5b14a44fb9fb65278cdca9 266 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 1.8E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS08515 a115734cbe5b14a44fb9fb65278cdca9 266 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 1.8E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS08515 a115734cbe5b14a44fb9fb65278cdca9 266 Gene3D G3DSA:1.10.10.10 21 88 1.9E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08515 a115734cbe5b14a44fb9fb65278cdca9 266 PANTHER PTHR11751 25 125 8.2E-18 T 22-04-2016 PNUC_RS08515 a115734cbe5b14a44fb9fb65278cdca9 266 SMART SM00345 26 85 1.7E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS08515 a115734cbe5b14a44fb9fb65278cdca9 266 SUPERFAMILY SSF46785 18 88 1.95E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08515 a115734cbe5b14a44fb9fb65278cdca9 266 SMART SM00895 109 235 8.3E-24 T 22-04-2016 IPR011711 GntR, C-terminal PNUC_RS08515 a115734cbe5b14a44fb9fb65278cdca9 266 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 85 4.8E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS08515 a115734cbe5b14a44fb9fb65278cdca9 266 SUPERFAMILY SSF48008 107 240 1.2E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PNUC_RS01850 7c7a95946fe0178e1b5ca0d38d54e0ff 175 PIRSF PIRSF016183 1 175 1.4E-55 T 22-04-2016 IPR006839 Ribosome-associated, YjgA PNUC_RS01850 7c7a95946fe0178e1b5ca0d38d54e0ff 175 PANTHER PTHR38101:SF1 14 173 2.5E-45 T 22-04-2016 PNUC_RS01850 7c7a95946fe0178e1b5ca0d38d54e0ff 175 Gene3D G3DSA:1.10.60.30 28 99 1.3E-22 T 22-04-2016 IPR023153 PSPTO4464-like domain PNUC_RS01850 7c7a95946fe0178e1b5ca0d38d54e0ff 175 SUPERFAMILY SSF158710 28 173 3.53E-46 T 22-04-2016 PNUC_RS01850 7c7a95946fe0178e1b5ca0d38d54e0ff 175 Gene3D G3DSA:1.10.60.30 107 173 5.6E-28 T 22-04-2016 IPR023153 PSPTO4464-like domain PNUC_RS01850 7c7a95946fe0178e1b5ca0d38d54e0ff 175 Pfam PF04751 Protein of unknown function (DUF615) 18 171 5.3E-49 T 22-04-2016 IPR006839 Ribosome-associated, YjgA PNUC_RS01850 7c7a95946fe0178e1b5ca0d38d54e0ff 175 PANTHER PTHR38101 14 173 2.5E-45 T 22-04-2016 PNUC_RS09675 066be267ae3517e3d8dd73d242eebcf3 190 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 8 152 3.2E-40 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 PNUC_RS09675 066be267ae3517e3d8dd73d242eebcf3 190 PANTHER PTHR23133 5 185 2.5E-66 T 22-04-2016 PNUC_RS09675 066be267ae3517e3d8dd73d242eebcf3 190 Pfam PF08645 Polynucleotide kinase 3 phosphatase 20 136 1.6E-8 T 22-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase PNUC_RS09675 066be267ae3517e3d8dd73d242eebcf3 190 SUPERFAMILY SSF56784 4 168 3.64E-39 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS09675 066be267ae3517e3d8dd73d242eebcf3 190 Gene3D G3DSA:3.40.50.1000 3 182 5.2E-49 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS09675 066be267ae3517e3d8dd73d242eebcf3 190 PANTHER PTHR23133:SF7 5 185 2.5E-66 T 22-04-2016 PNUC_RS09675 066be267ae3517e3d8dd73d242eebcf3 190 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 151 2.4E-31 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA PNUC_RS09675 066be267ae3517e3d8dd73d242eebcf3 190 PIRSF PIRSF004682 1 189 3.2E-49 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 Pfam PF00406 Adenylate kinase 5 185 1.9E-56 T 22-04-2016 PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 PRINTS PR00094 Adenylate kinase signature 173 187 1.0E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 PRINTS PR00094 Adenylate kinase signature 4 17 1.0E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 PRINTS PR00094 Adenylate kinase signature 81 97 1.0E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 PRINTS PR00094 Adenylate kinase signature 32 46 1.0E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 PRINTS PR00094 Adenylate kinase signature 156 171 1.0E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 TIGRFAM TIGR01351 adk: adenylate kinase 2 190 2.2E-72 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.5E-16 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 Hamap MF_00235 Adenylate kinase [adk]. 1 221 51.394 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 SUPERFAMILY SSF52540 1 218 5.66E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 PANTHER PTHR23359 1 220 8.1E-107 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PNUC_RS01480 6cc32f154cb9d7c10a213462ac8a1b5b 221 Gene3D G3DSA:3.40.50.300 1 218 7.9E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 Gene3D G3DSA:1.10.1860.10 1 88 1.2E-35 T 22-04-2016 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 Pfam PF01274 Malate synthase 18 710 8.5E-170 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 Gene3D G3DSA:1.20.1220.12 602 735 1.8E-74 T 22-04-2016 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 PANTHER PTHR21631 509 737 1.6E-142 T 22-04-2016 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 PANTHER PTHR21631 35 41 1.6E-142 T 22-04-2016 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 PANTHER PTHR21631:SF7 509 737 1.6E-142 T 22-04-2016 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 PANTHER PTHR21631:SF7 35 41 1.6E-142 T 22-04-2016 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 SUPERFAMILY SSF51645 4 734 1.57E-289 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 6 735 0.0 T 22-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 Gene3D G3DSA:3.20.20.360 342 601 2.4E-136 T 22-04-2016 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 Gene3D G3DSA:3.20.20.360 266 296 2.4E-136 T 22-04-2016 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 Gene3D G3DSA:3.20.20.360 89 135 2.4E-136 T 22-04-2016 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 Gene3D G3DSA:2.170.170.11 298 341 1.0E-67 T 22-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 Gene3D G3DSA:2.170.170.11 136 264 1.0E-67 T 22-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PNUC_RS06715 6f7926fa63e3eba4e5a14ab426a469ab 737 Hamap MF_00641 Malate synthase G [glcB]. 1 737 384.601 T 22-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PNUC_RS04515 8f2682489eeb2fea6194006c2fca87a6 549 PANTHER PTHR30203:SF3 4 500 1.6E-104 T 22-04-2016 PNUC_RS04515 8f2682489eeb2fea6194006c2fca87a6 549 Gene3D G3DSA:1.20.1600.10 65 485 9.7E-101 T 22-04-2016 PNUC_RS04515 8f2682489eeb2fea6194006c2fca87a6 549 Pfam PF02321 Outer membrane efflux protein 294 465 1.3E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PNUC_RS04515 8f2682489eeb2fea6194006c2fca87a6 549 Pfam PF02321 Outer membrane efflux protein 74 263 4.2E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PNUC_RS04515 8f2682489eeb2fea6194006c2fca87a6 549 SUPERFAMILY SSF56954 4 38 1.22E-99 T 22-04-2016 PNUC_RS04515 8f2682489eeb2fea6194006c2fca87a6 549 SUPERFAMILY SSF56954 65 484 1.22E-99 T 22-04-2016 PNUC_RS04515 8f2682489eeb2fea6194006c2fca87a6 549 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 480 1.8E-98 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PNUC_RS04515 8f2682489eeb2fea6194006c2fca87a6 549 PANTHER PTHR30203 4 500 1.6E-104 T 22-04-2016 PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 SUPERFAMILY SSF63882 29 198 9.55E-47 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 Pfam PF03453 MoeA N-terminal region (domain I and II) 17 189 5.0E-34 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 Gene3D G3DSA:3.90.105.10 164 184 6.2E-19 T 22-04-2016 PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 Gene3D G3DSA:3.90.105.10 45 67 6.2E-19 T 22-04-2016 PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 PANTHER PTHR10192 41 437 6.9E-155 T 22-04-2016 PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 Gene3D G3DSA:3.40.980.10 185 361 4.3E-62 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 Gene3D G3DSA:2.170.190.11 68 163 3.7E-24 T 22-04-2016 PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 PANTHER PTHR10192:SF11 41 437 6.9E-155 T 22-04-2016 PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 SUPERFAMILY SSF63867 357 437 4.19E-23 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 Pfam PF03454 MoeA C-terminal region (domain IV) 362 433 1.3E-16 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 SUPERFAMILY SSF53218 199 351 2.75E-40 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 SMART SM00852 202 348 2.8E-40 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 Pfam PF00994 Probable molybdopterin binding domain 202 346 1.8E-27 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 Gene3D G3DSA:2.40.340.10 362 430 8.4E-29 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02025 ce836dadfc6542e03488a12448b66e96 437 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 198 343 4.0E-31 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02235 c6c71629f9c35a30283feb9833bc9c61 273 SUPERFAMILY SSF50182 107 172 8.5E-16 T 22-04-2016 IPR010920 LSM domain PNUC_RS02235 c6c71629f9c35a30283feb9833bc9c61 273 PANTHER PTHR30221:SF3 5 272 1.2E-142 T 22-04-2016 PNUC_RS02235 c6c71629f9c35a30283feb9833bc9c61 273 SUPERFAMILY SSF82689 174 272 3.53E-18 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PNUC_RS02235 c6c71629f9c35a30283feb9833bc9c61 273 Gene3D G3DSA:3.30.70.100 175 258 5.0E-12 T 22-04-2016 PNUC_RS02235 c6c71629f9c35a30283feb9833bc9c61 273 Pfam PF00924 Mechanosensitive ion channel 65 258 8.2E-38 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PNUC_RS02235 c6c71629f9c35a30283feb9833bc9c61 273 SUPERFAMILY SSF82861 22 101 5.62E-12 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PNUC_RS02235 c6c71629f9c35a30283feb9833bc9c61 273 PANTHER PTHR30221 5 272 1.2E-142 T 22-04-2016 PNUC_RS02235 c6c71629f9c35a30283feb9833bc9c61 273 Gene3D G3DSA:2.30.30.60 122 171 1.4E-14 T 22-04-2016 PNUC_RS04035 9f71bc00fefd01ae7f1896c18af70a20 295 Pfam PF01039 Carboxyl transferase domain 117 243 9.4E-13 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04035 9f71bc00fefd01ae7f1896c18af70a20 295 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 285 2.4E-123 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04035 9f71bc00fefd01ae7f1896c18af70a20 295 Gene3D G3DSA:3.90.226.10 21 286 1.5E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS04035 9f71bc00fefd01ae7f1896c18af70a20 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 6.6E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04035 9f71bc00fefd01ae7f1896c18af70a20 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 6.6E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04035 9f71bc00fefd01ae7f1896c18af70a20 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 6.6E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04035 9f71bc00fefd01ae7f1896c18af70a20 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 6.6E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04035 9f71bc00fefd01ae7f1896c18af70a20 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 6.6E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04035 9f71bc00fefd01ae7f1896c18af70a20 295 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 283 36.543 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04035 9f71bc00fefd01ae7f1896c18af70a20 295 PANTHER PTHR22855 1 287 5.9E-146 T 22-04-2016 PNUC_RS04035 9f71bc00fefd01ae7f1896c18af70a20 295 SUPERFAMILY SSF52096 27 282 1.06E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS04035 9f71bc00fefd01ae7f1896c18af70a20 295 PANTHER PTHR22855:SF17 1 287 5.9E-146 T 22-04-2016 PNUC_RS10620 481d8ccd2ae949be8be7e1e04b086af5 329 SMART SM01060 26 329 1.4E-8 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PNUC_RS10620 481d8ccd2ae949be8be7e1e04b086af5 329 SUPERFAMILY SSF56634 29 326 3.53E-81 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PNUC_RS10620 481d8ccd2ae949be8be7e1e04b086af5 329 PRINTS PR00067 Catalase signature 96 113 9.4E-6 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PNUC_RS10620 481d8ccd2ae949be8be7e1e04b086af5 329 PRINTS PR00067 Catalase signature 75 93 9.4E-6 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PNUC_RS10620 481d8ccd2ae949be8be7e1e04b086af5 329 PRINTS PR00067 Catalase signature 301 327 9.4E-6 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PNUC_RS10620 481d8ccd2ae949be8be7e1e04b086af5 329 PIRSF PIRSF000296 3 329 8.2E-105 T 22-04-2016 IPR024168 Catalase, SrpA-type, predicted PNUC_RS10620 481d8ccd2ae949be8be7e1e04b086af5 329 Gene3D G3DSA:2.40.180.10 23 326 1.9E-73 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PNUC_RS10620 481d8ccd2ae949be8be7e1e04b086af5 329 PANTHER PTHR11465 1 326 8.9E-69 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PNUC_RS10620 481d8ccd2ae949be8be7e1e04b086af5 329 Pfam PF00199 Catalase 44 327 4.6E-32 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PNUC_RS10620 481d8ccd2ae949be8be7e1e04b086af5 329 PANTHER PTHR11465:SF16 1 326 8.9E-69 T 22-04-2016 PNUC_RS06755 8c563d555e33ff192caed1bd01ccaa0d 388 SMART SM00564 325 356 2.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PNUC_RS06755 8c563d555e33ff192caed1bd01ccaa0d 388 SMART SM00564 109 140 140.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PNUC_RS06755 8c563d555e33ff192caed1bd01ccaa0d 388 SMART SM00564 70 101 0.14 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PNUC_RS06755 8c563d555e33ff192caed1bd01ccaa0d 388 SMART SM00564 149 180 2.1 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PNUC_RS06755 8c563d555e33ff192caed1bd01ccaa0d 388 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 18 385 9.2E-115 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB PNUC_RS06755 8c563d555e33ff192caed1bd01ccaa0d 388 Pfam PF13360 PQQ-like domain 90 313 5.1E-45 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat PNUC_RS06755 8c563d555e33ff192caed1bd01ccaa0d 388 PANTHER PTHR32303 40 378 2.5E-47 T 22-04-2016 PNUC_RS06755 8c563d555e33ff192caed1bd01ccaa0d 388 Gene3D G3DSA:2.140.10.10 9 387 2.9E-62 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PNUC_RS06755 8c563d555e33ff192caed1bd01ccaa0d 388 SUPERFAMILY SSF50998 36 378 1.23E-70 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PNUC_RS06755 8c563d555e33ff192caed1bd01ccaa0d 388 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 6 387 32.555 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB PNUC_RS06755 8c563d555e33ff192caed1bd01ccaa0d 388 PANTHER PTHR32303:SF8 40 378 2.5E-47 T 22-04-2016 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 Gene3D G3DSA:3.30.70.260 272 357 4.2E-28 T 22-04-2016 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 SUPERFAMILY SSF55021 262 357 8.1E-25 T 22-04-2016 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 Gene3D G3DSA:1.20.59.10 2 88 3.0E-23 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 SUPERFAMILY SSF48600 7 94 4.58E-21 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 Gene3D G3DSA:3.40.190.10 178 255 3.2E-24 T 22-04-2016 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 Pfam PF01817 Chorismate mutase type II 12 88 2.2E-23 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 SMART SM00830 12 91 6.3E-30 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 243 265 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 PIRSF PIRSF001500 1 359 1.0E-136 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 Pfam PF00800 Prephenate dehydratase 93 267 2.3E-60 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 Pfam PF01842 ACT domain 279 343 1.2E-11 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 PANTHER PTHR21022 4 356 5.2E-122 T 22-04-2016 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 PANTHER PTHR21022:SF0 4 356 5.2E-122 T 22-04-2016 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 SUPERFAMILY SSF53850 92 274 1.3E-57 T 22-04-2016 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 Gene3D G3DSA:3.40.190.10 89 177 7.2E-34 T 22-04-2016 PNUC_RS02585 9a7f4657975b3c67fa5249c3ca421aee 359 TIGRFAM TIGR01807 CM_P2: chorismate mutase 8 81 1.8E-26 T 22-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 PNUC_RS06725 93adbf5db7177fcadaf41a8469c9c4cb 387 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 12 318 3.0E-84 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 PNUC_RS06725 93adbf5db7177fcadaf41a8469c9c4cb 387 PANTHER PTHR11476:SF5 12 318 1.0E-49 T 22-04-2016 PNUC_RS06725 93adbf5db7177fcadaf41a8469c9c4cb 387 PANTHER PTHR11476 12 318 1.0E-49 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PNUC_RS06725 93adbf5db7177fcadaf41a8469c9c4cb 387 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 369 30.779 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 PNUC_RS06725 93adbf5db7177fcadaf41a8469c9c4cb 387 Gene3D G3DSA:3.30.930.10 17 316 2.5E-65 T 22-04-2016 PNUC_RS06725 93adbf5db7177fcadaf41a8469c9c4cb 387 SUPERFAMILY SSF55681 5 315 8.82E-58 T 22-04-2016 PNUC_RS06725 93adbf5db7177fcadaf41a8469c9c4cb 387 Pfam PF13393 Histidyl-tRNA synthetase 10 316 2.2E-107 T 22-04-2016 PNUC_RS03955 831884273c4529a6635581c68416458c 139 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 10 133 6.1E-37 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 PNUC_RS03955 831884273c4529a6635581c68416458c 139 PANTHER PTHR10978:SF4 4 133 8.7E-23 T 22-04-2016 PNUC_RS03955 831884273c4529a6635581c68416458c 139 Gene3D G3DSA:1.20.1300.10 5 136 6.7E-37 T 22-04-2016 PNUC_RS03955 831884273c4529a6635581c68416458c 139 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 130 1.9E-25 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 PNUC_RS03955 831884273c4529a6635581c68416458c 139 PANTHER PTHR10978 4 133 8.7E-23 T 22-04-2016 PNUC_RS03955 831884273c4529a6635581c68416458c 139 PIRSF PIRSF000178 1 136 2.1E-28 T 22-04-2016 PNUC_RS03955 831884273c4529a6635581c68416458c 139 SUPERFAMILY SSF81343 6 135 1.05E-28 T 22-04-2016 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 PANTHER PTHR11451:SF31 1 634 0.0 T 22-04-2016 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 8.2E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 8.2E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 8.2E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 8.2E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 8.2E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 PANTHER PTHR11451 1 634 0.0 T 22-04-2016 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 Pfam PF03129 Anticodon binding domain 540 629 3.7E-20 T 22-04-2016 IPR004154 Anticodon-binding PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 Gene3D G3DSA:3.30.54.20 130 186 2.0E-22 T 22-04-2016 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 SMART SM00863 169 218 2.4E-23 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 1.3E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 SUPERFAMILY SSF55186 64 240 6.41E-67 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 SUPERFAMILY SSF52954 529 632 3.02E-30 T 22-04-2016 IPR004154 Anticodon-binding PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 Gene3D G3DSA:3.10.20.30 1 64 4.1E-20 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 Gene3D G3DSA:3.40.50.800 530 633 1.5E-33 T 22-04-2016 IPR004154 Anticodon-binding PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 SUPERFAMILY SSF55681 242 525 8.42E-101 T 22-04-2016 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 SUPERFAMILY SSF81271 3 61 2.11E-14 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 317 528 1.6E-44 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 Pfam PF02824 TGS domain 3 61 2.7E-9 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 Gene3D G3DSA:3.30.980.10 187 222 2.5E-41 T 22-04-2016 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 Gene3D G3DSA:3.30.980.10 66 129 2.5E-41 T 22-04-2016 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.433 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 6.9E-222 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PNUC_RS04315 43461798c1de068f9c6fc2abdfdcd2e6 640 Gene3D G3DSA:3.30.930.10 241 529 1.6E-122 T 22-04-2016 PNUC_RS07810 39ca31e1290f0f6cfbfa498303413bb7 189 PANTHER PTHR33221 2 155 4.6E-56 T 22-04-2016 PNUC_RS07810 39ca31e1290f0f6cfbfa498303413bb7 189 PANTHER PTHR33221:SF1 2 155 4.6E-56 T 22-04-2016 PNUC_RS07810 39ca31e1290f0f6cfbfa498303413bb7 189 Gene3D G3DSA:1.10.10.10 1 137 2.5E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS07810 39ca31e1290f0f6cfbfa498303413bb7 189 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 135 1.4E-42 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type PNUC_RS07810 39ca31e1290f0f6cfbfa498303413bb7 189 Pfam PF02082 Transcriptional regulator 1 83 3.9E-26 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type PNUC_RS07810 39ca31e1290f0f6cfbfa498303413bb7 189 SUPERFAMILY SSF46785 2 136 1.31E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 SMART SM01116 75 147 5.6E-50 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 SUPERFAMILY SSF47413 1 77 6.3E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 PANTHER PTHR34186:SF2 2 147 1.2E-61 T 22-04-2016 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 Gene3D G3DSA:1.10.260.40 1 79 7.2E-31 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 Gene3D G3DSA:3.30.1160.10 81 146 2.3E-36 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 PIRSF PIRSF001263 1 147 7.0E-48 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 Hamap MF_00535 Cyanate hydratase [cynS]. 1 147 81.766 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 PRINTS PR01693 Cyanase signature 14 29 3.7E-26 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 PRINTS PR01693 Cyanase signature 101 117 3.7E-26 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 PRINTS PR01693 Cyanase signature 34 51 3.7E-26 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 PRINTS PR01693 Cyanase signature 83 97 3.7E-26 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 PRINTS PR01693 Cyanase signature 132 142 3.7E-26 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 PANTHER PTHR34186 2 147 1.2E-61 T 22-04-2016 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 Pfam PF02560 Cyanate lyase C-terminal domain 79 145 4.5E-35 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 SUPERFAMILY SSF55234 80 147 5.75E-30 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PNUC_RS05190 87dce3c139fcc28eecc2af305626e87f 147 TIGRFAM TIGR00673 cynS: cyanase 4 147 3.4E-50 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PNUC_RS10340 4952a4588de9d78a8bf04a993f6e930f 302 PANTHER PTHR12126:SF1 4 299 1.9E-57 T 22-04-2016 PNUC_RS10340 4952a4588de9d78a8bf04a993f6e930f 302 SUPERFAMILY SSF51735 3 265 7.18E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10340 4952a4588de9d78a8bf04a993f6e930f 302 PANTHER PTHR12126 4 299 1.9E-57 T 22-04-2016 PNUC_RS10340 4952a4588de9d78a8bf04a993f6e930f 302 Pfam PF13460 NAD(P)H-binding 9 205 1.2E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10340 4952a4588de9d78a8bf04a993f6e930f 302 Gene3D G3DSA:3.40.50.720 4 233 4.7E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS06950 24daffd4a8c98da57c783110d2086f98 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 43 314 9.8E-91 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS06950 24daffd4a8c98da57c783110d2086f98 318 PIRSF PIRSF017082 1 318 8.8E-88 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS06950 24daffd4a8c98da57c783110d2086f98 318 SUPERFAMILY SSF53850 108 281 5.25E-14 T 22-04-2016 PNUC_RS06950 24daffd4a8c98da57c783110d2086f98 318 PANTHER PTHR30349 3 279 2.3E-90 T 22-04-2016 PNUC_RS06950 24daffd4a8c98da57c783110d2086f98 318 PANTHER PTHR30349:SF16 3 279 2.3E-90 T 22-04-2016 PNUC_RS06285 012f3aac486fa09d4fc8188e8675754f 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.1E-52 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06285 012f3aac486fa09d4fc8188e8675754f 100 PANTHER PTHR33569 2 100 8.2E-47 T 22-04-2016 PNUC_RS06285 012f3aac486fa09d4fc8188e8675754f 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 4.0E-41 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06285 012f3aac486fa09d4fc8188e8675754f 100 Pfam PF00547 Urease, gamma subunit 1 99 3.3E-48 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06285 012f3aac486fa09d4fc8188e8675754f 100 PIRSF PIRSF001223 1 100 7.7E-52 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06285 012f3aac486fa09d4fc8188e8675754f 100 SUPERFAMILY SSF54111 1 99 7.32E-47 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06285 012f3aac486fa09d4fc8188e8675754f 100 Gene3D G3DSA:3.30.280.10 1 99 3.4E-50 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06285 012f3aac486fa09d4fc8188e8675754f 100 PANTHER PTHR33569:SF1 2 100 8.2E-47 T 22-04-2016 PNUC_RS06285 012f3aac486fa09d4fc8188e8675754f 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 35.304 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS09465 5ec5e5b8ed18f2386c16855e1ee23246 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 35.62 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 PNUC_RS09465 5ec5e5b8ed18f2386c16855e1ee23246 158 Gene3D G3DSA:3.30.70.640 3 156 1.9E-67 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 PNUC_RS09465 5ec5e5b8ed18f2386c16855e1ee23246 158 SUPERFAMILY SSF55040 11 155 6.8E-59 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 PNUC_RS09465 5ec5e5b8ed18f2386c16855e1ee23246 158 PANTHER PTHR22960 1 158 6.7E-90 T 22-04-2016 PNUC_RS09465 5ec5e5b8ed18f2386c16855e1ee23246 158 Pfam PF01967 MoaC family 15 150 6.4E-53 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 PNUC_RS09465 5ec5e5b8ed18f2386c16855e1ee23246 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 3.3E-59 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 PNUC_RS04660 70bb8f7b9867a446ce99ffcd4cab5872 382 SUPERFAMILY SSF51905 9 273 3.88E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04660 70bb8f7b9867a446ce99ffcd4cab5872 382 Pfam PF01266 FAD dependent oxidoreductase 10 345 5.7E-35 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PNUC_RS04660 70bb8f7b9867a446ce99ffcd4cab5872 382 Gene3D G3DSA:3.50.50.60 8 90 3.4E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04660 70bb8f7b9867a446ce99ffcd4cab5872 382 Gene3D G3DSA:3.50.50.60 150 210 3.4E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04660 70bb8f7b9867a446ce99ffcd4cab5872 382 Gene3D G3DSA:3.50.50.60 312 361 3.4E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04660 70bb8f7b9867a446ce99ffcd4cab5872 382 Gene3D G3DSA:3.30.9.10 211 309 1.2E-13 T 22-04-2016 PNUC_RS05480 1c1201b6e05ebd96734ed4ca374092d4 160 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.516 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 PNUC_RS05480 1c1201b6e05ebd96734ed4ca374092d4 160 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 3.1E-23 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 PNUC_RS05480 1c1201b6e05ebd96734ed4ca374092d4 160 PANTHER PTHR11995:SF19 11 156 9.2E-122 T 22-04-2016 PNUC_RS05480 1c1201b6e05ebd96734ed4ca374092d4 160 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 6.4E-78 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 PNUC_RS05480 1c1201b6e05ebd96734ed4ca374092d4 160 PANTHER PTHR11995 11 156 9.2E-122 T 22-04-2016 PNUC_RS05480 1c1201b6e05ebd96734ed4ca374092d4 160 SUPERFAMILY SSF56770 9 153 1.7E-67 T 22-04-2016 PNUC_RS05480 1c1201b6e05ebd96734ed4ca374092d4 160 Gene3D G3DSA:3.40.50.700 22 149 1.2E-32 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 PNUC_RS05480 1c1201b6e05ebd96734ed4ca374092d4 160 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 PNUC_RS06640 f14454f72535baa53c3416c8450b5b9f 447 SUPERFAMILY SSF51556 87 392 2.83E-69 T 22-04-2016 IPR032466 Metal-dependent hydrolase PNUC_RS06640 f14454f72535baa53c3416c8450b5b9f 447 PANTHER PTHR11271 26 444 1.9E-75 T 22-04-2016 PNUC_RS06640 f14454f72535baa53c3416c8450b5b9f 447 Gene3D G3DSA:2.30.40.10 402 445 5.2E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS06640 f14454f72535baa53c3416c8450b5b9f 447 Gene3D G3DSA:2.30.40.10 25 88 5.2E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS06640 f14454f72535baa53c3416c8450b5b9f 447 Gene3D G3DSA:3.20.20.140 89 389 1.1E-72 T 22-04-2016 PNUC_RS06640 f14454f72535baa53c3416c8450b5b9f 447 Pfam PF01979 Amidohydrolase family 83 445 9.7E-26 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PNUC_RS06640 f14454f72535baa53c3416c8450b5b9f 447 SUPERFAMILY SSF51338 28 86 2.71E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS06640 f14454f72535baa53c3416c8450b5b9f 447 PANTHER PTHR11271:SF33 26 444 1.9E-75 T 22-04-2016 PNUC_RS06640 f14454f72535baa53c3416c8450b5b9f 447 SUPERFAMILY SSF51338 377 447 3.56E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 Gene3D G3DSA:3.40.50.300 4 228 4.6E-124 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 Gene3D G3DSA:3.40.50.300 372 419 4.6E-124 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 Pfam PF01043 SecA preprotein cross-linking domain 233 361 1.1E-37 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 SUPERFAMILY SSF81767 227 371 1.57E-42 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 ProSitePatterns PS01312 SecA family signature. 503 518 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 Gene3D G3DSA:1.10.3060.10 658 841 1.9E-53 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 Pfam PF02810 SEC-C motif 901 918 4.4E-8 T 22-04-2016 IPR004027 SEC-C motif PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 PANTHER PTHR30612 560 921 0.0 T 22-04-2016 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 PANTHER PTHR30612 9 523 0.0 T 22-04-2016 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 Pfam PF07516 SecA Wing and Scaffold domain 627 839 7.0E-63 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 SMART SM00958 228 361 4.2E-75 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 SUPERFAMILY SSF81886 631 850 9.55E-76 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 SUPERFAMILY SSF81886 897 909 9.55E-76 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 Gene3D G3DSA:3.90.1440.10 232 371 2.5E-44 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 PRINTS PR00906 SecA protein signature 416 429 3.7E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 PRINTS PR00906 SecA protein signature 117 127 3.7E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 PRINTS PR00906 SecA protein signature 379 396 3.7E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 PRINTS PR00906 SecA protein signature 101 115 3.7E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 PRINTS PR00906 SecA protein signature 63 87 3.7E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 PRINTS PR00906 SecA protein signature 342 364 3.7E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 PRINTS PR00906 SecA protein signature 170 190 3.7E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 SUPERFAMILY SSF52540 371 418 4.14E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 SUPERFAMILY SSF52540 5 228 4.14E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 SMART SM00957 6 405 4.6E-294 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 842 19.703 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 Gene3D G3DSA:3.40.50.300 422 629 3.3E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 Pfam PF07517 SecA DEAD-like domain 7 405 5.4E-129 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 30 827 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PNUC_RS00950 64f65187ae021cbc76fd46de03bf9a49 921 SUPERFAMILY SSF52540 420 628 6.69E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03685 ad31b8e7baed53948a15aef5b006e513 441 Pfam PF11799 impB/mucB/samB family C-terminal domain 261 378 1.4E-12 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS03685 ad31b8e7baed53948a15aef5b006e513 441 Pfam PF00817 impB/mucB/samB family 22 168 1.1E-32 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS03685 ad31b8e7baed53948a15aef5b006e513 441 Pfam PF13438 Domain of unknown function (DUF4113) 391 440 9.2E-22 T 22-04-2016 IPR025188 Domain of unknown function DUF4113 PNUC_RS03685 ad31b8e7baed53948a15aef5b006e513 441 Gene3D G3DSA:1.10.150.20 188 259 1.4E-17 T 22-04-2016 PNUC_RS03685 ad31b8e7baed53948a15aef5b006e513 441 SUPERFAMILY SSF56672 19 256 1.6E-63 T 22-04-2016 PNUC_RS03685 ad31b8e7baed53948a15aef5b006e513 441 PANTHER PTHR11076 18 437 1.9E-146 T 22-04-2016 PNUC_RS03685 ad31b8e7baed53948a15aef5b006e513 441 Gene3D G3DSA:3.30.70.270 87 177 5.8E-24 T 22-04-2016 PNUC_RS03685 ad31b8e7baed53948a15aef5b006e513 441 PANTHER PTHR11076:SF40 18 437 1.9E-146 T 22-04-2016 PNUC_RS08960 019bd46e30829b14b17810b79135d21f 295 PANTHER PTHR10366:SF430 8 291 3.7E-40 T 22-04-2016 PNUC_RS08960 019bd46e30829b14b17810b79135d21f 295 Pfam PF13460 NAD(P)H-binding 15 205 5.9E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08960 019bd46e30829b14b17810b79135d21f 295 PANTHER PTHR10366 8 291 3.7E-40 T 22-04-2016 PNUC_RS08960 019bd46e30829b14b17810b79135d21f 295 Gene3D G3DSA:3.40.50.720 13 274 3.0E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08960 019bd46e30829b14b17810b79135d21f 295 SUPERFAMILY SSF51735 8 275 2.83E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS07935 a55147b28df66a7529bf223c5865bb84 191 SMART SM00867 25 188 1.3E-59 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PNUC_RS07935 a55147b28df66a7529bf223c5865bb84 191 Pfam PF04264 YceI-like domain 26 187 3.8E-35 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PNUC_RS07935 a55147b28df66a7529bf223c5865bb84 191 SUPERFAMILY SSF101874 25 190 9.81E-50 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PNUC_RS07935 a55147b28df66a7529bf223c5865bb84 191 Gene3D G3DSA:2.40.128.110 23 190 1.2E-49 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PNUC_RS07935 a55147b28df66a7529bf223c5865bb84 191 PANTHER PTHR34406:SF1 4 191 1.6E-41 T 22-04-2016 PNUC_RS07935 a55147b28df66a7529bf223c5865bb84 191 PANTHER PTHR34406 4 191 1.6E-41 T 22-04-2016 PNUC_RS09990 82604a6acb1a3f21b7a58a1a2333a39e 455 Gene3D G3DSA:3.30.830.10 247 444 1.2E-26 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PNUC_RS09990 82604a6acb1a3f21b7a58a1a2333a39e 455 PANTHER PTHR11851:SF136 29 445 3.1E-103 T 22-04-2016 PNUC_RS09990 82604a6acb1a3f21b7a58a1a2333a39e 455 Pfam PF00675 Insulinase (Peptidase family M16) 41 184 1.7E-27 T 22-04-2016 IPR011765 Peptidase M16, N-terminal PNUC_RS09990 82604a6acb1a3f21b7a58a1a2333a39e 455 SUPERFAMILY SSF63411 28 238 1.28E-62 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PNUC_RS09990 82604a6acb1a3f21b7a58a1a2333a39e 455 Gene3D G3DSA:3.30.830.10 27 246 8.9E-58 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PNUC_RS09990 82604a6acb1a3f21b7a58a1a2333a39e 455 Pfam PF05193 Peptidase M16 inactive domain 196 374 1.0E-28 T 22-04-2016 IPR007863 Peptidase M16, C-terminal PNUC_RS09990 82604a6acb1a3f21b7a58a1a2333a39e 455 SUPERFAMILY SSF63411 250 444 2.17E-31 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PNUC_RS09990 82604a6acb1a3f21b7a58a1a2333a39e 455 PANTHER PTHR11851 29 445 3.1E-103 T 22-04-2016 PNUC_RS09990 82604a6acb1a3f21b7a58a1a2333a39e 455 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 PNUC_RS05290 5d091487dab6627f7aa44c6a5896d40e 279 Pfam PF00809 Pterin binding enzyme 23 262 3.5E-81 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 PNUC_RS05290 5d091487dab6627f7aa44c6a5896d40e 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 22 276 9.8E-99 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 PNUC_RS05290 5d091487dab6627f7aa44c6a5896d40e 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 PNUC_RS05290 5d091487dab6627f7aa44c6a5896d40e 279 PANTHER PTHR20941 15 277 3.2E-109 T 22-04-2016 PNUC_RS05290 5d091487dab6627f7aa44c6a5896d40e 279 SUPERFAMILY SSF51717 15 278 3.66E-97 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 PNUC_RS05290 5d091487dab6627f7aa44c6a5896d40e 279 Gene3D G3DSA:3.20.20.20 17 278 1.9E-105 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 PNUC_RS05290 5d091487dab6627f7aa44c6a5896d40e 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 PNUC_RS05290 5d091487dab6627f7aa44c6a5896d40e 279 PANTHER PTHR20941:SF1 15 277 3.2E-109 T 22-04-2016 PNUC_RS00115 31be11997c076ee83bd00e2f51ab422c 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 176 1.2E-35 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PNUC_RS00115 31be11997c076ee83bd00e2f51ab422c 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 3.0E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PNUC_RS00115 31be11997c076ee83bd00e2f51ab422c 178 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.0E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PNUC_RS00115 31be11997c076ee83bd00e2f51ab422c 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.0E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PNUC_RS00115 31be11997c076ee83bd00e2f51ab422c 178 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.0E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PNUC_RS00115 31be11997c076ee83bd00e2f51ab422c 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 3.0E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PNUC_RS00115 31be11997c076ee83bd00e2f51ab422c 178 PANTHER PTHR11910 7 176 1.8E-38 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PNUC_RS00115 31be11997c076ee83bd00e2f51ab422c 178 SUPERFAMILY SSF47928 3 105 6.28E-19 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain PNUC_RS00115 31be11997c076ee83bd00e2f51ab422c 178 Gene3D G3DSA:1.10.520.20 2 105 1.9E-23 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain PNUC_RS00115 31be11997c076ee83bd00e2f51ab422c 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 19.057 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PNUC_RS00115 31be11997c076ee83bd00e2f51ab422c 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 3.2E-48 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 Pfam PF00575 S1 RNA binding domain 140 199 1.5E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 SMART SM00316 136 203 3.1E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 Gene3D G3DSA:3.30.300.20 281 349 1.7E-28 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 Pfam PF08529 NusA N-terminal domain 5 128 6.6E-35 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 Gene3D G3DSA:1.10.150.20 357 423 1.9E-23 T 22-04-2016 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 Gene3D G3DSA:1.10.150.20 430 492 2.0E-21 T 22-04-2016 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 PANTHER PTHR22648 1 449 2.0E-152 T 22-04-2016 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 Pfam PF14520 Helix-hairpin-helix domain 433 488 7.0E-7 T 22-04-2016 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 SUPERFAMILY SSF54814 282 345 1.11E-14 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 Gene3D G3DSA:3.30.1480.10 1 129 1.5E-41 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 SUPERFAMILY SSF47794 357 419 2.51E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 PANTHER PTHR22648:SF0 1 449 2.0E-152 T 22-04-2016 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 368 416 1.3E-19 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 443 490 1.3E-13 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 Pfam PF13184 NusA-like KH domain 233 300 2.0E-22 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 413 28.795 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 344 4.1E-118 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 SUPERFAMILY SSF69705 1 130 8.76E-36 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 SUPERFAMILY SSF47794 430 492 2.04E-14 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 SUPERFAMILY SSF54814 203 281 8.5E-27 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 Gene3D G3DSA:3.30.300.20 202 280 1.5E-29 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 SUPERFAMILY SSF50249 138 202 1.56E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS06450 a738627bc8835aa71b63e8d0d68cf117 493 Gene3D G3DSA:2.40.50.140 140 201 7.7E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS04010 f157d2b18356424891f7f6044a688ebf 458 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 408 453 3.5E-8 T 22-04-2016 IPR020011 Motility protein FimV, C-terminal PNUC_RS04010 f157d2b18356424891f7f6044a688ebf 458 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 148 222 4.2E-17 T 22-04-2016 IPR020012 Motility protein FimV, N-terminal PNUC_RS10265 c9135ca541f0a4a752011055b4295c73 361 SMART SM00849 47 274 2.4E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS10265 c9135ca541f0a4a752011055b4295c73 361 Pfam PF00753 Metallo-beta-lactamase superfamily 51 274 2.0E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS10265 c9135ca541f0a4a752011055b4295c73 361 PANTHER PTHR11935 22 133 1.1E-42 T 22-04-2016 PNUC_RS10265 c9135ca541f0a4a752011055b4295c73 361 PANTHER PTHR11935 165 285 1.1E-42 T 22-04-2016 PNUC_RS10265 c9135ca541f0a4a752011055b4295c73 361 SUPERFAMILY SSF56281 20 358 9.96E-70 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS10265 c9135ca541f0a4a752011055b4295c73 361 PANTHER PTHR11935:SF109 22 133 1.1E-42 T 22-04-2016 PNUC_RS10265 c9135ca541f0a4a752011055b4295c73 361 PANTHER PTHR11935:SF109 165 285 1.1E-42 T 22-04-2016 PNUC_RS10265 c9135ca541f0a4a752011055b4295c73 361 Gene3D G3DSA:3.60.15.10 22 304 3.1E-48 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS05420 2beda350e6e4e3337195495f08163c68 499 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 230 251 7.0E-6 T 22-04-2016 PNUC_RS05420 2beda350e6e4e3337195495f08163c68 499 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 87 112 7.0E-6 T 22-04-2016 PNUC_RS05420 2beda350e6e4e3337195495f08163c68 499 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 428 447 7.0E-6 T 22-04-2016 PNUC_RS05420 2beda350e6e4e3337195495f08163c68 499 PANTHER PTHR22773:SF41 1 496 4.5E-154 T 22-04-2016 PNUC_RS05420 2beda350e6e4e3337195495f08163c68 499 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 485 18.07 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 PNUC_RS05420 2beda350e6e4e3337195495f08163c68 499 PANTHER PTHR22773 1 496 4.5E-154 T 22-04-2016 PNUC_RS05420 2beda350e6e4e3337195495f08163c68 499 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 7 482 4.3E-135 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 PNUC_RS05420 2beda350e6e4e3337195495f08163c68 499 Pfam PF00361 Proton-conducting membrane transporter 141 434 1.7E-74 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PNUC_RS04680 9f5b2c9144a713420d5f32d966fb8187 406 PANTHER PTHR11360 4 399 2.1E-120 T 22-04-2016 PNUC_RS04680 9f5b2c9144a713420d5f32d966fb8187 406 Pfam PF07690 Major Facilitator Superfamily 13 326 9.6E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS04680 9f5b2c9144a713420d5f32d966fb8187 406 SUPERFAMILY SSF103473 9 397 1.26E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS04680 9f5b2c9144a713420d5f32d966fb8187 406 Gene3D G3DSA:1.20.1250.20 207 395 2.1E-18 T 22-04-2016 PNUC_RS04680 9f5b2c9144a713420d5f32d966fb8187 406 Gene3D G3DSA:1.20.1250.20 6 190 1.3E-17 T 22-04-2016 PNUC_RS04680 9f5b2c9144a713420d5f32d966fb8187 406 PANTHER PTHR11360:SF115 4 399 2.1E-120 T 22-04-2016 PNUC_RS05990 d997539797bd93d92a739e2f213d33ba 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 1.4E-64 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PNUC_RS05990 d997539797bd93d92a739e2f213d33ba 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 327 488 1.1E-47 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PNUC_RS05990 d997539797bd93d92a739e2f213d33ba 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.2E-99 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PNUC_RS05990 d997539797bd93d92a739e2f213d33ba 507 Gene3D G3DSA:3.20.130.10 312 489 3.2E-71 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PNUC_RS05990 d997539797bd93d92a739e2f213d33ba 507 PANTHER PTHR30389:SF1 1 507 2.4E-301 T 22-04-2016 PNUC_RS05990 d997539797bd93d92a739e2f213d33ba 507 SUPERFAMILY SSF117457 318 489 2.22E-61 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PNUC_RS05990 d997539797bd93d92a739e2f213d33ba 507 PIRSF PIRSF001394 1 506 7.8E-217 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS05990 d997539797bd93d92a739e2f213d33ba 507 Pfam PF05683 Fumarase C-terminus 289 490 2.4E-80 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PNUC_RS05990 d997539797bd93d92a739e2f213d33ba 507 PANTHER PTHR30389 1 507 2.4E-301 T 22-04-2016 PNUC_RS06825 38bdc993f8cd8dab7ce4f6da66b260b0 505 SUPERFAMILY SSF56954 91 501 7.19E-65 T 22-04-2016 PNUC_RS06825 38bdc993f8cd8dab7ce4f6da66b260b0 505 SUPERFAMILY SSF56954 13 40 7.19E-65 T 22-04-2016 PNUC_RS06825 38bdc993f8cd8dab7ce4f6da66b260b0 505 PANTHER PTHR30203 90 494 3.2E-31 T 22-04-2016 PNUC_RS06825 38bdc993f8cd8dab7ce4f6da66b260b0 505 Gene3D G3DSA:1.20.1600.10 97 501 8.0E-53 T 22-04-2016 PNUC_RS06825 38bdc993f8cd8dab7ce4f6da66b260b0 505 Pfam PF02321 Outer membrane efflux protein 318 497 2.9E-20 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PNUC_RS06825 38bdc993f8cd8dab7ce4f6da66b260b0 505 Pfam PF02321 Outer membrane efflux protein 102 293 1.4E-19 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PNUC_RS09305 2763200ff1b68ffe489bf98aae1039e4 324 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 109 285 6.9E-47 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PNUC_RS09305 2763200ff1b68ffe489bf98aae1039e4 324 Pfam PF07549 SecD/SecF GG Motif 32 55 2.6E-6 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PNUC_RS09305 2763200ff1b68ffe489bf98aae1039e4 324 PRINTS PR01755 Bacterial translocase SecF protein signature 204 222 1.0E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PNUC_RS09305 2763200ff1b68ffe489bf98aae1039e4 324 PRINTS PR01755 Bacterial translocase SecF protein signature 156 170 1.0E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PNUC_RS09305 2763200ff1b68ffe489bf98aae1039e4 324 PRINTS PR01755 Bacterial translocase SecF protein signature 236 251 1.0E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PNUC_RS09305 2763200ff1b68ffe489bf98aae1039e4 324 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 1.0E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PNUC_RS09305 2763200ff1b68ffe489bf98aae1039e4 324 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 288 3.1E-72 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PNUC_RS09305 2763200ff1b68ffe489bf98aae1039e4 324 Pfam PF02355 Protein export membrane protein 117 296 3.3E-61 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PNUC_RS09305 2763200ff1b68ffe489bf98aae1039e4 324 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 299 28.264 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PNUC_RS09305 2763200ff1b68ffe489bf98aae1039e4 324 SUPERFAMILY SSF82866 71 296 6.93E-40 T 22-04-2016 PNUC_RS09305 2763200ff1b68ffe489bf98aae1039e4 324 PANTHER PTHR30081 10 324 2.9E-69 T 22-04-2016 PNUC_RS09305 2763200ff1b68ffe489bf98aae1039e4 324 Gene3D G3DSA:1.20.1640.10 121 302 1.6E-26 T 22-04-2016 PNUC_RS02535 5a81dacb7cf1e54900cd9f5dc94a12bd 333 PANTHER PTHR30349 38 302 3.5E-65 T 22-04-2016 PNUC_RS02535 5a81dacb7cf1e54900cd9f5dc94a12bd 333 Gene3D G3DSA:3.40.190.10 133 223 1.9E-6 T 22-04-2016 PNUC_RS02535 5a81dacb7cf1e54900cd9f5dc94a12bd 333 PIRSF PIRSF017082 2 330 2.4E-67 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS02535 5a81dacb7cf1e54900cd9f5dc94a12bd 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 327 1.6E-76 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS02535 5a81dacb7cf1e54900cd9f5dc94a12bd 333 SUPERFAMILY SSF53850 122 292 5.27E-17 T 22-04-2016 PNUC_RS02535 5a81dacb7cf1e54900cd9f5dc94a12bd 333 PANTHER PTHR30349:SF1 38 302 3.5E-65 T 22-04-2016 PNUC_RS03865 1d22f7c128150d61d541411d4442846a 274 Pfam PF01614 Bacterial transcriptional regulator 139 259 1.7E-30 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal PNUC_RS03865 1d22f7c128150d61d541411d4442846a 274 SUPERFAMILY SSF55781 78 263 1.44E-45 T 22-04-2016 IPR029016 GAF domain-like PNUC_RS03865 1d22f7c128150d61d541411d4442846a 274 SUPERFAMILY SSF46785 21 92 4.55E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03865 1d22f7c128150d61d541411d4442846a 274 Pfam PF09339 IclR helix-turn-helix domain 24 72 8.3E-15 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PNUC_RS03865 1d22f7c128150d61d541411d4442846a 274 SMART SM00346 21 110 1.4E-22 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PNUC_RS03865 1d22f7c128150d61d541411d4442846a 274 Gene3D G3DSA:1.10.10.10 20 90 2.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03865 1d22f7c128150d61d541411d4442846a 274 PANTHER PTHR30136 21 273 4.5E-65 T 22-04-2016 PNUC_RS03865 1d22f7c128150d61d541411d4442846a 274 Gene3D G3DSA:3.30.450.40 91 266 2.0E-52 T 22-04-2016 IPR029016 GAF domain-like PNUC_RS03865 1d22f7c128150d61d541411d4442846a 274 PANTHER PTHR30136:SF7 21 273 4.5E-65 T 22-04-2016 PNUC_RS01170 b09080aed83cd019ef0e1c1530c7e905 281 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 95 108 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS01170 b09080aed83cd019ef0e1c1530c7e905 281 SMART SM00934 22 264 9.1E-50 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS01170 b09080aed83cd019ef0e1c1530c7e905 281 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 21 257 6.3E-31 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS01170 b09080aed83cd019ef0e1c1530c7e905 281 Gene3D G3DSA:3.20.20.70 10 266 5.5E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS01170 b09080aed83cd019ef0e1c1530c7e905 281 SUPERFAMILY SSF51366 8 266 4.04E-74 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PNUC_RS01170 b09080aed83cd019ef0e1c1530c7e905 281 PANTHER PTHR19278:SF1 7 232 1.6E-58 T 22-04-2016 PNUC_RS01170 b09080aed83cd019ef0e1c1530c7e905 281 PANTHER PTHR19278 7 232 1.6E-58 T 22-04-2016 PNUC_RS01170 b09080aed83cd019ef0e1c1530c7e905 281 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 7 277 35.491 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS01170 b09080aed83cd019ef0e1c1530c7e905 281 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 8 264 4.6E-70 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS09330 609fe720e4c8f940c82da3531a1a5e61 376 SMART SM01002 145 318 1.0E-78 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PNUC_RS09330 609fe720e4c8f940c82da3531a1a5e61 376 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 22-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 PNUC_RS09330 609fe720e4c8f940c82da3531a1a5e61 376 Gene3D G3DSA:3.40.50.1770 2 186 5.2E-60 T 22-04-2016 PNUC_RS09330 609fe720e4c8f940c82da3531a1a5e61 376 SUPERFAMILY SSF51735 155 339 6.68E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS09330 609fe720e4c8f940c82da3531a1a5e61 376 PANTHER PTHR10160 1 375 2.7E-159 T 22-04-2016 PNUC_RS09330 609fe720e4c8f940c82da3531a1a5e61 376 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 2.5E-41 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PNUC_RS09330 609fe720e4c8f940c82da3531a1a5e61 376 SUPERFAMILY SSF52283 1 167 9.35E-51 T 22-04-2016 PNUC_RS09330 609fe720e4c8f940c82da3531a1a5e61 376 SMART SM01003 4 136 2.4E-66 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PNUC_RS09330 609fe720e4c8f940c82da3531a1a5e61 376 Gene3D G3DSA:3.40.50.1770 187 372 1.1E-36 T 22-04-2016 PNUC_RS09330 609fe720e4c8f940c82da3531a1a5e61 376 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 373 9.2E-68 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PNUC_RS10160 87a6e7d1df356334a3347450146fe458 336 Hamap MF_00206 Lipoyl synthase [lipA]. 47 336 147.568 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PNUC_RS10160 87a6e7d1df356334a3347450146fe458 336 Pfam PF04055 Radical SAM superfamily 102 266 6.5E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PNUC_RS10160 87a6e7d1df356334a3347450146fe458 336 PANTHER PTHR10949 43 329 4.4E-152 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PNUC_RS10160 87a6e7d1df356334a3347450146fe458 336 SMART SM00729 95 304 3.5E-15 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PNUC_RS10160 87a6e7d1df356334a3347450146fe458 336 Gene3D G3DSA:3.20.20.70 63 328 1.8E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS10160 87a6e7d1df356334a3347450146fe458 336 TIGRFAM TIGR00510 lipA: lipoyl synthase 43 329 1.1E-124 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PNUC_RS10160 87a6e7d1df356334a3347450146fe458 336 SUPERFAMILY SSF102114 62 331 1.44E-62 T 22-04-2016 PNUC_RS10160 87a6e7d1df356334a3347450146fe458 336 PIRSF PIRSF005963 1 335 1.4E-122 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PNUC_RS01345 335b2bb9b372e14473a169b5a3afa26b 319 Gene3D G3DSA:3.40.50.720 1 237 3.4E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01345 335b2bb9b372e14473a169b5a3afa26b 319 PANTHER PTHR10491 1 316 4.3E-79 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family PNUC_RS01345 335b2bb9b372e14473a169b5a3afa26b 319 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 293 2.2E-82 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family PNUC_RS01345 335b2bb9b372e14473a169b5a3afa26b 319 Pfam PF04321 RmlD substrate binding domain 1 290 4.8E-84 T 22-04-2016 IPR029903 RmlD-like substrate binding domain PNUC_RS01345 335b2bb9b372e14473a169b5a3afa26b 319 SUPERFAMILY SSF51735 1 290 1.83E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01345 335b2bb9b372e14473a169b5a3afa26b 319 PANTHER PTHR10491:SF4 1 316 4.3E-79 T 22-04-2016 PNUC_RS02660 6d666f25d575d241465d9ba829259806 306 Gene3D G3DSA:3.40.800.20 3 304 2.4E-109 T 22-04-2016 IPR023801 Histone deacetylase domain PNUC_RS02660 6d666f25d575d241465d9ba829259806 306 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 2.2E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily PNUC_RS02660 6d666f25d575d241465d9ba829259806 306 PRINTS PR01270 Histone deacetylase superfamily signature 233 243 2.2E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily PNUC_RS02660 6d666f25d575d241465d9ba829259806 306 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 2.2E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily PNUC_RS02660 6d666f25d575d241465d9ba829259806 306 Pfam PF00850 Histone deacetylase domain 20 303 3.7E-83 T 22-04-2016 IPR023801 Histone deacetylase domain PNUC_RS02660 6d666f25d575d241465d9ba829259806 306 PANTHER PTHR10625 1 305 6.6E-104 T 22-04-2016 IPR000286 Histone deacetylase superfamily PNUC_RS02660 6d666f25d575d241465d9ba829259806 306 SUPERFAMILY SSF52768 1 305 1.1E-107 T 22-04-2016 PNUC_RS09215 724c77d07c7fe412b0893af6afb8d672 556 SUPERFAMILY SSF52540 347 513 1.04E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09215 724c77d07c7fe412b0893af6afb8d672 556 SUPERFAMILY SSF52540 1 204 1.04E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09215 724c77d07c7fe412b0893af6afb8d672 556 SUPERFAMILY SSF52540 291 319 1.04E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09215 724c77d07c7fe412b0893af6afb8d672 556 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 555 2.2E-152 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PNUC_RS09215 724c77d07c7fe412b0893af6afb8d672 556 Gene3D G3DSA:3.40.50.300 1 211 8.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09215 724c77d07c7fe412b0893af6afb8d672 556 Gene3D G3DSA:3.40.50.300 433 499 6.9E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09215 724c77d07c7fe412b0893af6afb8d672 556 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 514 1.3E-22 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal PNUC_RS09215 724c77d07c7fe412b0893af6afb8d672 556 PANTHER PTHR11059 2 554 4.1E-151 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PNUC_RS09215 724c77d07c7fe412b0893af6afb8d672 556 PIRSF PIRSF003128 1 556 9.3E-156 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PNUC_RS00365 ee235a5d2d54c66581f2bc81d976e7ba 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.23 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PNUC_RS00365 ee235a5d2d54c66581f2bc81d976e7ba 122 SMART SM01374 1 122 6.4E-83 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PNUC_RS00365 ee235a5d2d54c66581f2bc81d976e7ba 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site PNUC_RS00365 ee235a5d2d54c66581f2bc81d976e7ba 122 SUPERFAMILY SSF50193 1 122 2.49E-49 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PNUC_RS00365 ee235a5d2d54c66581f2bc81d976e7ba 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.2E-53 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PNUC_RS00365 ee235a5d2d54c66581f2bc81d976e7ba 122 Gene3D G3DSA:2.40.150.20 1 122 6.2E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PNUC_RS00365 ee235a5d2d54c66581f2bc81d976e7ba 122 PANTHER PTHR11761 1 122 8.9E-71 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PNUC_RS00365 ee235a5d2d54c66581f2bc81d976e7ba 122 PANTHER PTHR11761:SF3 1 122 8.9E-71 T 22-04-2016 PNUC_RS00365 ee235a5d2d54c66581f2bc81d976e7ba 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.9E-56 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 PNUC_RS05095 1bb3e30dbe8586a758581c9719e5df75 387 PANTHER PTHR23522 1 363 4.8E-62 T 22-04-2016 PNUC_RS05095 1bb3e30dbe8586a758581c9719e5df75 387 PIRSF PIRSF004925 1 386 6.1E-94 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter PNUC_RS05095 1bb3e30dbe8586a758581c9719e5df75 387 SUPERFAMILY SSF103473 7 383 8.5E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS05095 1bb3e30dbe8586a758581c9719e5df75 387 Pfam PF12832 MFS_1 like family 9 361 8.6E-66 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain PNUC_RS05095 1bb3e30dbe8586a758581c9719e5df75 387 Gene3D G3DSA:1.20.1250.20 201 381 2.7E-21 T 22-04-2016 PNUC_RS05095 1bb3e30dbe8586a758581c9719e5df75 387 Gene3D G3DSA:1.20.1250.20 7 188 2.0E-21 T 22-04-2016 PNUC_RS05095 1bb3e30dbe8586a758581c9719e5df75 387 PANTHER PTHR23522:SF3 1 363 4.8E-62 T 22-04-2016 PNUC_RS02375 d80e73b16b8ebaa43f27e863e9cd7f19 480 SUPERFAMILY SSF81442 13 470 8.9E-124 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS02375 d80e73b16b8ebaa43f27e863e9cd7f19 480 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 16 445 3.9E-117 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS02375 d80e73b16b8ebaa43f27e863e9cd7f19 480 PANTHER PTHR10422 8 462 1.2E-287 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS02375 d80e73b16b8ebaa43f27e863e9cd7f19 480 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 206 261 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS02375 d80e73b16b8ebaa43f27e863e9cd7f19 480 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 475 2.9E-235 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS02375 d80e73b16b8ebaa43f27e863e9cd7f19 480 Gene3D G3DSA:1.20.210.10 15 469 1.4E-71 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS02375 d80e73b16b8ebaa43f27e863e9cd7f19 480 PANTHER PTHR10422:SF21 8 462 1.2E-287 T 22-04-2016 PNUC_RS01645 4f4b6255dca2db277b5ab29faf3acf21 427 SUPERFAMILY SSF53756 30 384 4.87E-23 T 22-04-2016 PNUC_RS01645 4f4b6255dca2db277b5ab29faf3acf21 427 Gene3D G3DSA:3.40.50.2000 239 355 9.1E-4 T 22-04-2016 PNUC_RS01645 4f4b6255dca2db277b5ab29faf3acf21 427 PANTHER PTHR12526:SF399 231 408 2.2E-13 T 22-04-2016 PNUC_RS01645 4f4b6255dca2db277b5ab29faf3acf21 427 Pfam PF00534 Glycosyl transferases group 1 239 380 1.1E-13 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 PNUC_RS01645 4f4b6255dca2db277b5ab29faf3acf21 427 PANTHER PTHR12526 231 408 2.2E-13 T 22-04-2016 PNUC_RS04195 0cd88e350cba66a03a17a1185b21c520 212 SUPERFAMILY SSF46626 97 203 3.3E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04195 0cd88e350cba66a03a17a1185b21c520 212 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 126 205 3.0E-23 T 22-04-2016 IPR030999 Sulfur oxidation c-type cytochrome SoxX PNUC_RS04195 0cd88e350cba66a03a17a1185b21c520 212 Pfam PF00034 Cytochrome c 128 203 9.0E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04195 0cd88e350cba66a03a17a1185b21c520 212 Gene3D G3DSA:1.10.760.10 86 204 9.2E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04195 0cd88e350cba66a03a17a1185b21c520 212 PIRSF PIRSF024608 1 212 8.3E-58 T 22-04-2016 IPR016823 Sulfur oxidation c-type cytochrome SoxX, type II PNUC_RS02805 5118078a03a85f021cd59511d61a9ead 265 Pfam PF14023 Protein of unknown function (DUF4239) 55 258 1.5E-64 T 22-04-2016 IPR025333 Protein of unknown function DUF4239 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 Gene3D G3DSA:2.40.30.10 302 395 6.6E-47 T 22-04-2016 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site PNUC_RS00305 89609bc427f29059460091cdb510d826 396 PANTHER PTHR23115:SF151 1 394 2.9E-263 T 22-04-2016 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 Gene3D G3DSA:3.40.50.300 4 213 1.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00305 89609bc427f29059460091cdb510d826 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 2.7E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.188 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 PANTHER PTHR23115 1 394 2.9E-263 T 22-04-2016 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.5E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 Gene3D G3DSA:2.40.30.10 214 300 3.5E-36 T 22-04-2016 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 SUPERFAMILY SSF50465 304 396 9.5E-37 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PNUC_RS00305 89609bc427f29059460091cdb510d826 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.1E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PNUC_RS00305 89609bc427f29059460091cdb510d826 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 8.3E-59 T 22-04-2016 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 SUPERFAMILY SSF52540 6 221 5.72E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00305 89609bc427f29059460091cdb510d826 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.3E-228 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00305 89609bc427f29059460091cdb510d826 396 SUPERFAMILY SSF50447 207 303 7.46E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS00240 89609bc427f29059460091cdb510d826 396 Gene3D G3DSA:2.40.30.10 302 395 6.6E-47 T 22-04-2016 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site PNUC_RS00240 89609bc427f29059460091cdb510d826 396 PANTHER PTHR23115:SF151 1 394 2.9E-263 T 22-04-2016 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 Gene3D G3DSA:3.40.50.300 4 213 1.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00240 89609bc427f29059460091cdb510d826 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 2.7E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.188 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 PANTHER PTHR23115 1 394 2.9E-263 T 22-04-2016 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.5E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 Gene3D G3DSA:2.40.30.10 214 300 3.5E-36 T 22-04-2016 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 SUPERFAMILY SSF50465 304 396 9.5E-37 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PNUC_RS00240 89609bc427f29059460091cdb510d826 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.1E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PNUC_RS00240 89609bc427f29059460091cdb510d826 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 8.3E-59 T 22-04-2016 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 SUPERFAMILY SSF52540 6 221 5.72E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00240 89609bc427f29059460091cdb510d826 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.3E-228 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS00240 89609bc427f29059460091cdb510d826 396 SUPERFAMILY SSF50447 207 303 7.46E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS08225 f2da0505f3a127c36904bc58d890622f 296 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 35 253 1.3E-24 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 PNUC_RS08225 f2da0505f3a127c36904bc58d890622f 296 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 13 258 7.2E-21 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 PANTHER PTHR11624 341 664 0.0 T 22-04-2016 IPR033247 Transketolase family PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 PANTHER PTHR11624 1 310 0.0 T 22-04-2016 IPR033247 Transketolase family PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 Gene3D G3DSA:3.40.50.970 7 322 4.2E-132 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 SUPERFAMILY SSF52922 532 662 3.0E-40 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 333 1.8E-161 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 PANTHER PTHR11624:SF1 341 664 0.0 T 22-04-2016 PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 PANTHER PTHR11624:SF1 1 310 0.0 T 22-04-2016 PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 9.5E-47 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 SMART SM00861 355 526 2.4E-69 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 SUPERFAMILY SSF52518 6 330 2.83E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 Gene3D G3DSA:3.40.50.970 327 533 1.8E-80 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 Gene3D G3DSA:3.40.50.920 538 661 9.1E-41 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 661 3.1E-295 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 Pfam PF02780 Transketolase, C-terminal domain 550 653 1.0E-15 T 22-04-2016 IPR033248 Transketolase, C-terminal domain PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 SUPERFAMILY SSF52518 336 525 8.25E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS01210 9f181a32e30b875ae8a82642818fcd8b 664 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 PANTHER PTHR11444 9 481 6.8E-212 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 PANTHER PTHR11444:SF1 9 481 6.8E-212 T 22-04-2016 PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 ProSitePatterns PS00163 Fumarate lyases signature. 334 343 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 Hamap MF_00743 Fumarate hydratase class II [fumC]. 21 478 77.161 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 Pfam PF00206 Lyase 29 359 1.9E-101 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 Gene3D G3DSA:1.20.200.10 156 420 3.7E-90 T 22-04-2016 PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 Gene3D G3DSA:1.10.40.30 422 479 2.3E-18 T 22-04-2016 PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 PRINTS PR00145 Argininosuccinate lyase family signature 150 172 6.6E-6 T 22-04-2016 PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 PRINTS PR00145 Argininosuccinate lyase family signature 334 350 6.6E-6 T 22-04-2016 PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 PRINTS PR00145 Argininosuccinate lyase family signature 192 212 6.6E-6 T 22-04-2016 PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 Pfam PF10415 Fumarase C C-terminus 425 477 5.3E-15 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 Gene3D G3DSA:1.10.275.10 21 155 6.6E-54 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 PRINTS PR00149 Fumarate lyase superfamily signature 151 169 2.0E-32 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 PRINTS PR00149 Fumarate lyase superfamily signature 197 215 2.0E-32 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 PRINTS PR00149 Fumarate lyase superfamily signature 288 315 2.0E-32 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 PRINTS PR00149 Fumarate lyase superfamily signature 334 350 2.0E-32 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS08425 da10e031c08db8e74a61eafbe08b2395 485 SUPERFAMILY SSF48557 22 468 6.13E-134 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 PNUC_RS00915 20b51fcd994d24b84257aa3f34c9d842 337 PANTHER PTHR23132 29 331 6.0E-83 T 22-04-2016 PNUC_RS00915 20b51fcd994d24b84257aa3f34c9d842 337 Pfam PF01820 D-ala D-ala ligase N-terminus 29 111 2.5E-20 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00915 20b51fcd994d24b84257aa3f34c9d842 337 Gene3D G3DSA:3.40.50.20 29 109 9.4E-27 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS00915 20b51fcd994d24b84257aa3f34c9d842 337 SUPERFAMILY SSF52440 29 121 1.06E-27 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS00915 20b51fcd994d24b84257aa3f34c9d842 337 Gene3D G3DSA:3.30.1490.20 140 196 2.5E-19 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PNUC_RS00915 20b51fcd994d24b84257aa3f34c9d842 337 Gene3D G3DSA:3.30.470.20 110 128 1.9E-44 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS00915 20b51fcd994d24b84257aa3f34c9d842 337 Gene3D G3DSA:3.30.470.20 197 327 1.9E-44 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS00915 20b51fcd994d24b84257aa3f34c9d842 337 Pfam PF07478 D-ala D-ala ligase C-terminus 129 325 1.2E-56 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00915 20b51fcd994d24b84257aa3f34c9d842 337 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 28 329 34.045 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00915 20b51fcd994d24b84257aa3f34c9d842 337 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 29 328 5.9E-96 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00915 20b51fcd994d24b84257aa3f34c9d842 337 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 88 99 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00915 20b51fcd994d24b84257aa3f34c9d842 337 SUPERFAMILY SSF56059 121 330 7.78E-54 T 22-04-2016 PNUC_RS02125 156b93dea8b0c94db7a0c3e8aed0307f 263 PANTHER PTHR11207 10 237 1.2E-76 T 22-04-2016 PNUC_RS02125 156b93dea8b0c94db7a0c3e8aed0307f 263 ProSitePatterns PS00517 Ribonuclease III family signature. 41 49 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PNUC_RS02125 156b93dea8b0c94db7a0c3e8aed0307f 263 Gene3D G3DSA:1.10.1520.10 10 150 2.1E-46 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PNUC_RS02125 156b93dea8b0c94db7a0c3e8aed0307f 263 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 12 223 1.8E-68 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 PNUC_RS02125 156b93dea8b0c94db7a0c3e8aed0307f 263 Hamap MF_00104 Ribonuclease 3 [rnc]. 12 223 28.449 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 PNUC_RS02125 156b93dea8b0c94db7a0c3e8aed0307f 263 SMART SM00358 159 227 1.2E-12 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain PNUC_RS02125 156b93dea8b0c94db7a0c3e8aed0307f 263 Gene3D G3DSA:3.30.160.20 156 224 2.7E-20 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain PNUC_RS02125 156b93dea8b0c94db7a0c3e8aed0307f 263 SMART SM00535 24 152 2.8E-46 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PNUC_RS02125 156b93dea8b0c94db7a0c3e8aed0307f 263 SUPERFAMILY SSF69065 3 148 4.53E-46 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PNUC_RS02125 156b93dea8b0c94db7a0c3e8aed0307f 263 Pfam PF00035 Double-stranded RNA binding motif 160 223 3.4E-9 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain PNUC_RS02125 156b93dea8b0c94db7a0c3e8aed0307f 263 SUPERFAMILY SSF54768 112 226 6.13E-22 T 22-04-2016 PNUC_RS02125 156b93dea8b0c94db7a0c3e8aed0307f 263 Pfam PF14622 Ribonuclease-III-like 23 141 1.4E-35 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PNUC_RS07910 f0376ac84ba68c51ba21f9ba181042a2 144 Gene3D G3DSA:2.40.50.140 25 122 2.3E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS07910 f0376ac84ba68c51ba21f9ba181042a2 144 SUPERFAMILY SSF82093 29 134 5.49E-38 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 PNUC_RS07910 f0376ac84ba68c51ba21f9ba181042a2 144 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 138 31.79 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 PNUC_RS07910 f0376ac84ba68c51ba21f9ba181042a2 144 PANTHER PTHR34128 4 140 7.7E-52 T 22-04-2016 PNUC_RS07910 f0376ac84ba68c51ba21f9ba181042a2 144 Pfam PF03100 CcmE 4 128 6.6E-46 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 PNUC_RS07910 f0376ac84ba68c51ba21f9ba181042a2 144 PANTHER PTHR34128:SF1 4 140 7.7E-52 T 22-04-2016 PNUC_RS01155 ed010a510d2f46d1d5f9da5ca411d448 295 SUPERFAMILY SSF74653 168 287 1.19E-14 T 22-04-2016 PNUC_RS01155 ed010a510d2f46d1d5f9da5ca411d448 295 Gene3D G3DSA:3.30.1150.10 173 287 1.5E-14 T 22-04-2016 PNUC_RS01155 ed010a510d2f46d1d5f9da5ca411d448 295 Pfam PF13103 TonB C terminal 185 268 2.6E-5 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 PNUC_RS01155 ed010a510d2f46d1d5f9da5ca411d448 295 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 203 273 1.0E-7 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 PNUC_RS03710 7732bd058c6953b3dab246d7521202a3 115 Gene3D G3DSA:2.20.25.10 5 44 9.8E-16 T 22-04-2016 PNUC_RS03710 7732bd058c6953b3dab246d7521202a3 115 SUPERFAMILY SSF82057 45 115 6.41E-26 T 22-04-2016 PNUC_RS03710 7732bd058c6953b3dab246d7521202a3 115 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 6 115 4.6E-45 T 22-04-2016 IPR004624 PhnA protein PNUC_RS03710 7732bd058c6953b3dab246d7521202a3 115 PANTHER PTHR30305 5 115 1.8E-58 T 22-04-2016 PNUC_RS03710 7732bd058c6953b3dab246d7521202a3 115 SUPERFAMILY SSF57783 6 41 4.25E-11 T 22-04-2016 PNUC_RS03710 7732bd058c6953b3dab246d7521202a3 115 Pfam PF03831 PhnA domain 49 115 9.6E-31 T 22-04-2016 IPR013988 PhnA protein, C-terminal PNUC_RS03710 7732bd058c6953b3dab246d7521202a3 115 Pfam PF08274 PhnA Zinc-Ribbon 7 35 1.3E-10 T 22-04-2016 IPR013987 PhnA protein, N-terminal PNUC_RS03710 7732bd058c6953b3dab246d7521202a3 115 Gene3D G3DSA:2.30.30.40 47 115 5.1E-34 T 22-04-2016 PNUC_RS07515 58e4a508f2efe2e80b2d5f67b684cd90 274 SUPERFAMILY SSF55315 5 112 2.82E-7 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like PNUC_RS07515 58e4a508f2efe2e80b2d5f67b684cd90 274 Gene3D G3DSA:3.40.1280.10 128 272 2.7E-38 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PNUC_RS07515 58e4a508f2efe2e80b2d5f67b684cd90 274 SUPERFAMILY SSF75217 128 270 3.2E-32 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PNUC_RS07515 58e4a508f2efe2e80b2d5f67b684cd90 274 Pfam PF00588 SpoU rRNA Methylase family 129 266 7.6E-30 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PNUC_RS07515 58e4a508f2efe2e80b2d5f67b684cd90 274 Gene3D G3DSA:3.30.1330.30 6 112 7.3E-6 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like PNUC_RS07515 58e4a508f2efe2e80b2d5f67b684cd90 274 PANTHER PTHR12029 129 270 1.8E-35 T 22-04-2016 PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 Gene3D G3DSA:3.40.50.300 6 276 1.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 Pfam PF12848 ABC transporter 221 295 1.9E-10 T 22-04-2016 IPR032781 ABC-transporter extension domain PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 SUPERFAMILY SSF52540 312 505 2.04E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 PANTHER PTHR19211 541 579 1.1E-211 T 22-04-2016 PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 PANTHER PTHR19211 1 523 1.1E-211 T 22-04-2016 PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 PANTHER PTHR19211:SF45 541 579 1.1E-211 T 22-04-2016 PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 PANTHER PTHR19211:SF45 1 523 1.1E-211 T 22-04-2016 PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 Pfam PF00005 ABC transporter 19 182 2.3E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 Pfam PF00005 ABC transporter 332 465 3.6E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 Pfam PF16326 ABC transporter C-terminal domain 567 634 4.4E-16 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 Gene3D G3DSA:3.40.50.300 318 532 9.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 ProSitePatterns PS00211 ABC transporters family signature. 437 451 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 SMART SM00382 28 226 1.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 SMART SM00382 340 511 5.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS03770 bc07e48bbde7c2ca3035521bfbe9815d 640 SUPERFAMILY SSF52540 5 228 1.56E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS10360 11826416d01710026508bb040cce1244 481 PIRSF PIRSF001109 2 481 4.8E-183 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PNUC_RS10360 11826416d01710026508bb040cce1244 481 Gene3D G3DSA:3.40.50.1480 14 150 5.7E-119 T 22-04-2016 PNUC_RS10360 11826416d01710026508bb040cce1244 481 Gene3D G3DSA:3.40.50.1480 186 273 5.7E-119 T 22-04-2016 PNUC_RS10360 11826416d01710026508bb040cce1244 481 SMART SM00996 14 480 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PNUC_RS10360 11826416d01710026508bb040cce1244 481 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 235 399 1.7E-76 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PNUC_RS10360 11826416d01710026508bb040cce1244 481 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 16 480 3.0E-141 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PNUC_RS10360 11826416d01710026508bb040cce1244 481 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 257 273 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PNUC_RS10360 11826416d01710026508bb040cce1244 481 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 17 473 2.7E-175 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PNUC_RS10360 11826416d01710026508bb040cce1244 481 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 10 473 46.901 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PNUC_RS10360 11826416d01710026508bb040cce1244 481 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 86 100 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PNUC_RS10360 11826416d01710026508bb040cce1244 481 PANTHER PTHR23420 17 149 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PNUC_RS10360 11826416d01710026508bb040cce1244 481 PANTHER PTHR23420 185 481 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PNUC_RS10360 11826416d01710026508bb040cce1244 481 SUPERFAMILY SSF51735 235 399 6.36E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10360 11826416d01710026508bb040cce1244 481 Gene3D G3DSA:3.40.50.1480 400 481 5.9E-32 T 22-04-2016 PNUC_RS10360 11826416d01710026508bb040cce1244 481 SUPERFAMILY SSF52283 400 481 1.42E-108 T 22-04-2016 PNUC_RS10360 11826416d01710026508bb040cce1244 481 SUPERFAMILY SSF52283 187 234 1.42E-108 T 22-04-2016 PNUC_RS10360 11826416d01710026508bb040cce1244 481 SUPERFAMILY SSF52283 14 151 1.42E-108 T 22-04-2016 PNUC_RS10360 11826416d01710026508bb040cce1244 481 SMART SM00997 235 399 1.8E-108 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PNUC_RS10360 11826416d01710026508bb040cce1244 481 Gene3D G3DSA:3.40.50.720 274 373 6.3E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 SUPERFAMILY SSF50249 65 125 3.21E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 SMART SM01185 67 120 2.7E-20 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 TIGRFAM TIGR00038 efp: translation elongation factor P 3 185 7.1E-62 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 Gene3D G3DSA:2.40.50.140 128 185 9.1E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 Gene3D G3DSA:2.30.30.30 1 62 1.5E-18 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 119 1.8E-17 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 Gene3D G3DSA:2.40.50.140 65 126 1.2E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 PANTHER PTHR30053 1 186 2.4E-65 T 22-04-2016 PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 SUPERFAMILY SSF50249 129 185 2.91E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 SUPERFAMILY SSF50104 1 63 2.06E-15 T 22-04-2016 IPR008991 Translation protein SH3-like domain PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 Hamap MF_00141 Elongation factor P [efp]. 1 185 46.358 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 SMART SM00841 128 184 2.9E-30 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 PIRSF PIRSF005901 1 186 1.5E-52 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 Pfam PF09285 Elongation factor P, C-terminal 129 184 3.4E-25 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 PNUC_RS02160 5b20e10b041463f2a9ba1743d4b58d4c 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 1.3E-16 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 PANTHER PTHR30473:SF2 87 263 4.2E-180 T 22-04-2016 PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 PANTHER PTHR30473:SF2 284 548 4.2E-180 T 22-04-2016 PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 PANTHER PTHR30473 87 263 4.2E-180 T 22-04-2016 PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 PANTHER PTHR30473 284 548 4.2E-180 T 22-04-2016 PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 SMART SM00670 88 223 1.7E-10 T 22-04-2016 IPR002716 PIN domain PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 Gene3D G3DSA:3.40.50.300 333 547 1.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 Pfam PF13638 PIN domain 90 235 8.5E-39 T 22-04-2016 IPR002716 PIN domain PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 Gene3D G3DSA:3.40.50.1010 89 148 1.0E-9 T 22-04-2016 IPR029060 PIN domain-like PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 Gene3D G3DSA:3.40.50.1010 186 243 1.0E-9 T 22-04-2016 IPR029060 PIN domain-like PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 SUPERFAMILY SSF88723 186 238 1.22E-12 T 22-04-2016 IPR029060 PIN domain-like PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 SUPERFAMILY SSF88723 87 149 1.22E-12 T 22-04-2016 IPR029060 PIN domain-like PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 Pfam PF02562 PhoH-like protein 336 544 8.5E-55 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 PNUC_RS02245 9bcbeef863042a13523684b68ddd1668 548 SUPERFAMILY SSF52540 335 526 4.05E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07195 fba024de80e1852c6fd2cdb450d9e210 180 Pfam PF01292 Prokaryotic cytochrome b561 6 174 8.0E-21 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PNUC_RS07195 fba024de80e1852c6fd2cdb450d9e210 180 PANTHER PTHR30529 1 178 4.9E-51 T 22-04-2016 PNUC_RS07195 fba024de80e1852c6fd2cdb450d9e210 180 PANTHER PTHR30529:SF3 1 178 4.9E-51 T 22-04-2016 PNUC_RS07195 fba024de80e1852c6fd2cdb450d9e210 180 SUPERFAMILY SSF81342 4 174 1.65E-24 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PNUC_RS04845 89ec49a3be594bdca59376ff39cc24db 167 Gene3D G3DSA:3.30.1330.50 9 166 3.4E-68 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS04845 89ec49a3be594bdca59376ff39cc24db 167 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 12 166 1.8E-63 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS04845 89ec49a3be594bdca59376ff39cc24db 167 PANTHER PTHR32125 11 167 4.6E-49 T 22-04-2016 PNUC_RS04845 89ec49a3be594bdca59376ff39cc24db 167 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 11 166 34.507 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS04845 89ec49a3be594bdca59376ff39cc24db 167 Pfam PF02542 YgbB family 11 164 8.2E-63 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS04845 89ec49a3be594bdca59376ff39cc24db 167 SUPERFAMILY SSF69765 10 166 1.02E-63 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS04845 89ec49a3be594bdca59376ff39cc24db 167 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 45 60 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 PANTHER PTHR19372 82 448 9.3E-78 T 22-04-2016 PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 TIGRFAM TIGR04555 sulfite_DH_soxC: sulfite dehydrogenase 35 448 2.0E-183 T 22-04-2016 IPR030835 Sulfite dehydrogenase SoxC PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 PRINTS PR00407 Eukaryotic molybdopterin domain signature 125 141 3.68E-16 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 PRINTS PR00407 Eukaryotic molybdopterin domain signature 266 279 3.68E-16 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 PRINTS PR00407 Eukaryotic molybdopterin domain signature 360 372 3.68E-16 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 PRINTS PR00407 Eukaryotic molybdopterin domain signature 282 295 3.68E-16 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 PRINTS PR00407 Eukaryotic molybdopterin domain signature 249 265 3.68E-16 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 PANTHER PTHR19372:SF2 82 448 9.3E-78 T 22-04-2016 PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 Gene3D G3DSA:2.60.40.650 327 439 1.3E-26 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 SUPERFAMILY SSF81296 325 439 4.41E-30 T 22-04-2016 IPR014756 Immunoglobulin E-set PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 325 435 8.2E-16 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 Gene3D G3DSA:3.90.420.10 102 326 1.9E-61 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 SUPERFAMILY SSF56524 87 328 6.93E-68 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PNUC_RS04170 3ff3988124291a787e514320913bd62d 451 Pfam PF00174 Oxidoreductase molybdopterin binding domain 141 298 4.7E-44 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PNUC_RS10390 64141c97987508b4916c16e218e221d7 260 SUPERFAMILY SSF56219 2 257 1.83E-71 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PNUC_RS10390 64141c97987508b4916c16e218e221d7 260 Gene3D G3DSA:3.60.10.10 1 257 1.2E-89 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PNUC_RS10390 64141c97987508b4916c16e218e221d7 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 249 1.7E-21 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PNUC_RS10390 64141c97987508b4916c16e218e221d7 260 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PNUC_RS10390 64141c97987508b4916c16e218e221d7 260 PANTHER PTHR22748 1 258 2.6E-92 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PNUC_RS10390 64141c97987508b4916c16e218e221d7 260 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 256 8.2E-75 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PNUC_RS10390 64141c97987508b4916c16e218e221d7 260 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 254 7.9E-70 T 22-04-2016 PNUC_RS08355 7ec271b0bf123d152153e32a858145ce 182 Pfam PF12915 Protein of unknown function (DUF3833) 17 181 2.0E-68 T 22-04-2016 IPR024409 Protein of unknown function DUF3833 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 Pfam PF00009 Elongation factor Tu GTP binding domain 16 280 5.3E-51 T 22-04-2016 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 Gene3D G3DSA:3.40.50.300 15 284 4.5E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 Gene3D G3DSA:2.40.30.10 294 395 2.7E-20 T 22-04-2016 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 10 531 1.9E-212 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 PANTHER PTHR23115:SF69 253 492 1.2E-218 T 22-04-2016 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 Pfam PF16658 Class II release factor RF3, C-terminal domain 389 516 7.7E-42 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 PANTHER PTHR23115 253 492 1.2E-218 T 22-04-2016 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 SUPERFAMILY SSF52540 15 280 8.7E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 Gene3D G3DSA:3.30.70.870 397 464 9.5E-12 T 22-04-2016 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 PANTHER PTHR23115:SF69 1 187 1.2E-218 T 22-04-2016 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 SUPERFAMILY SSF50447 263 393 6.6E-26 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 PRINTS PR00315 GTP-binding elongation factor signature 140 149 1.3E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 PRINTS PR00315 GTP-binding elongation factor signature 88 98 1.3E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 PRINTS PR00315 GTP-binding elongation factor signature 18 31 1.3E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 PRINTS PR00315 GTP-binding elongation factor signature 104 115 1.3E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 PRINTS PR00315 GTP-binding elongation factor signature 68 76 1.3E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 20 151 7.9E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 SUPERFAMILY SSF54980 394 465 3.02E-14 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 PANTHER PTHR23115 1 187 1.2E-218 T 22-04-2016 PNUC_RS10530 3292b12c1045dfb68655f5de8a80c2cb 542 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 7 529 52.027 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 PNUC_RS07045 64af54e307132267bcb6aa9312b99c09 181 PANTHER PTHR10681 41 164 1.9E-20 T 22-04-2016 PNUC_RS07045 64af54e307132267bcb6aa9312b99c09 181 Gene3D G3DSA:3.40.30.10 11 180 4.8E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS07045 64af54e307132267bcb6aa9312b99c09 181 SUPERFAMILY SSF52833 41 180 6.3E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS07045 64af54e307132267bcb6aa9312b99c09 181 PANTHER PTHR10681:SF125 41 164 1.9E-20 T 22-04-2016 PNUC_RS07045 64af54e307132267bcb6aa9312b99c09 181 Pfam PF00578 AhpC/TSA family 41 156 2.0E-20 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PNUC_RS07045 64af54e307132267bcb6aa9312b99c09 181 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PNUC_RS03670 8d475ea7ac1908be9456d28c955381c8 204 SMART SM00493 84 173 1.8E-8 T 22-04-2016 IPR006171 Toprim domain PNUC_RS03670 8d475ea7ac1908be9456d28c955381c8 204 SUPERFAMILY SSF111304 9 204 1.7E-70 T 22-04-2016 IPR023627 Recombination protein RecR PNUC_RS03670 8d475ea7ac1908be9456d28c955381c8 204 PANTHER PTHR30446:SF0 5 204 8.4E-92 T 22-04-2016 PNUC_RS03670 8d475ea7ac1908be9456d28c955381c8 204 Pfam PF13662 Toprim domain 85 179 2.7E-20 T 22-04-2016 IPR006171 Toprim domain PNUC_RS03670 8d475ea7ac1908be9456d28c955381c8 204 Pfam PF02132 RecR protein 45 82 8.3E-13 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger PNUC_RS03670 8d475ea7ac1908be9456d28c955381c8 204 PANTHER PTHR30446 5 204 8.4E-92 T 22-04-2016 PNUC_RS03670 8d475ea7ac1908be9456d28c955381c8 204 TIGRFAM TIGR00615 recR: recombination protein RecR 9 204 2.6E-69 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PNUC_RS03670 8d475ea7ac1908be9456d28c955381c8 204 Hamap MF_00017 Recombination protein RecR [recR]. 1 204 93.655 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PNUC_RS01470 876c10631c7711f396fd2b2a1b82e797 414 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PNUC_RS01470 876c10631c7711f396fd2b2a1b82e797 414 PIRSF PIRSF000412 1 414 1.2E-165 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PNUC_RS01470 876c10631c7711f396fd2b2a1b82e797 414 Gene3D G3DSA:3.90.1150.10 283 414 1.4E-59 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS01470 876c10631c7711f396fd2b2a1b82e797 414 PANTHER PTHR11680 8 414 1.2E-254 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PNUC_RS01470 876c10631c7711f396fd2b2a1b82e797 414 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 414 52.658 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PNUC_RS01470 876c10631c7711f396fd2b2a1b82e797 414 Pfam PF00464 Serine hydroxymethyltransferase 8 383 4.6E-174 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PNUC_RS01470 876c10631c7711f396fd2b2a1b82e797 414 Gene3D G3DSA:3.40.640.10 37 282 4.5E-105 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS01470 876c10631c7711f396fd2b2a1b82e797 414 SUPERFAMILY SSF53383 6 414 3.2E-181 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 SUPERFAMILY SSF51735 3 244 1.02E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.55E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 5.55E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.55E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.55E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.55E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.55E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.23E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.23E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.23E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 Pfam PF00106 short chain dehydrogenase 4 197 3.9E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 244 3.2E-120 T 22-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PANTHER PTHR24322 153 185 1.3E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PANTHER PTHR24322 8 137 1.3E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 Gene3D G3DSA:3.40.50.720 2 244 1.1E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PANTHER PTHR24322:SF328 153 185 1.3E-53 T 22-04-2016 PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 PANTHER PTHR24322:SF328 8 137 1.3E-53 T 22-04-2016 PNUC_RS04810 cf903bd990866d7cc0de57e1f51a2782 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 189 9.7E-4 T 22-04-2016 PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 36 2.7E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 581 659 3.2E-12 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 35 189 3.0E-11 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 313 543 2.6E-23 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 Gene3D G3DSA:3.30.365.10 544 706 1.5E-35 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 Gene3D G3DSA:3.90.1170.50 188 287 6.1E-18 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 SUPERFAMILY SSF56003 312 705 1.14E-101 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 Gene3D G3DSA:3.30.365.10 48 187 7.1E-30 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 Gene3D G3DSA:3.30.365.10 384 543 3.2E-31 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 PANTHER PTHR11908:SF2 48 707 2.1E-161 T 22-04-2016 PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 SUPERFAMILY SSF56003 23 240 4.53E-36 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 SMART SM01008 211 289 4.6E-22 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 PIRSF PIRSF036389 1 707 1.7E-232 T 22-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related PNUC_RS00960 3ebe9ad015b6ff564a5d1f36e894246e 707 PANTHER PTHR11908 48 707 2.1E-161 T 22-04-2016 PNUC_RS05505 a70693c5c40cfdcb2390993753a97a1b 332 PANTHER PTHR11695 15 332 2.9E-128 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PNUC_RS05505 a70693c5c40cfdcb2390993753a97a1b 332 SUPERFAMILY SSF50129 1 145 2.74E-30 T 22-04-2016 IPR011032 GroES-like PNUC_RS05505 a70693c5c40cfdcb2390993753a97a1b 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 96 1.7E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PNUC_RS05505 a70693c5c40cfdcb2390993753a97a1b 332 Pfam PF00107 Zinc-binding dehydrogenase 158 272 6.6E-30 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PNUC_RS05505 a70693c5c40cfdcb2390993753a97a1b 332 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 332 4.1E-139 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- PNUC_RS05505 a70693c5c40cfdcb2390993753a97a1b 332 PANTHER PTHR11695:SF610 15 332 2.9E-128 T 22-04-2016 PNUC_RS05505 a70693c5c40cfdcb2390993753a97a1b 332 Gene3D G3DSA:3.40.50.720 153 269 1.4E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS05505 a70693c5c40cfdcb2390993753a97a1b 332 SMART SM00829 10 330 9.1E-36 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PNUC_RS05505 a70693c5c40cfdcb2390993753a97a1b 332 Gene3D G3DSA:3.90.180.10 1 152 7.1E-34 T 22-04-2016 IPR011032 GroES-like PNUC_RS05505 a70693c5c40cfdcb2390993753a97a1b 332 SUPERFAMILY SSF51735 118 294 3.7E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 Pfam PF00364 Biotin-requiring enzyme 38 108 2.0E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 246 471 1.6E-78 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 SUPERFAMILY SSF47005 166 209 2.88E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 PANTHER PTHR23151:SF68 38 212 4.1E-180 T 22-04-2016 PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 PANTHER PTHR23151:SF68 228 472 4.1E-180 T 22-04-2016 PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 Pfam PF02817 e3 binding domain 172 206 6.5E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 Gene3D G3DSA:2.40.50.100 37 111 4.5E-19 T 22-04-2016 PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 34 472 5.9E-167 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 PANTHER PTHR23151 38 212 4.1E-180 T 22-04-2016 PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 PANTHER PTHR23151 228 472 4.1E-180 T 22-04-2016 PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 SUPERFAMILY SSF52777 234 472 5.34E-79 T 22-04-2016 PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 Gene3D G3DSA:4.10.320.10 167 214 2.9E-18 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 60 89 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 Gene3D G3DSA:3.30.559.10 235 471 1.4E-80 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain PNUC_RS08100 4f62a864ebe744894e836fc3480a233b 472 SUPERFAMILY SSF51230 36 114 2.62E-19 T 22-04-2016 IPR011053 Single hybrid motif PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 Gene3D G3DSA:1.10.287.130 139 205 2.7E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 Pfam PF13188 PAS domain 22 69 9.1E-5 T 22-04-2016 IPR000014 PAS domain PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 Gene3D G3DSA:3.30.450.20 19 97 2.2E-10 T 22-04-2016 PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 SUPERFAMILY SSF55785 22 92 4.19E-7 T 22-04-2016 IPR000014 PAS domain PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 SMART SM00091 18 86 2.8E-4 T 22-04-2016 IPR000014 PAS domain PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 SUPERFAMILY SSF55874 214 369 6.02E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 SUPERFAMILY SSF47384 139 208 6.28E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 Pfam PF00512 His Kinase A (phospho-acceptor) domain 149 208 3.6E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 252 371 7.5E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 SMART SM00387 252 372 1.3E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 PANTHER PTHR24423 22 372 2.4E-82 T 22-04-2016 PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 Gene3D G3DSA:3.30.565.10 214 371 9.8E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 SMART SM00388 147 212 1.6E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 369 2.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 318 2.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 351 2.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS06580 cf3e588d1af79375b079bf4b5c0ba9f8 377 PANTHER PTHR24423:SF488 22 372 2.4E-82 T 22-04-2016 PNUC_RS03600 54c168b0a2b255c801b130a9c5fbe32e 770 Gene3D G3DSA:3.40.50.300 367 669 1.2E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03600 54c168b0a2b255c801b130a9c5fbe32e 770 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 206 3.0E-48 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region PNUC_RS03600 54c168b0a2b255c801b130a9c5fbe32e 770 SMART SM00843 704 769 1.2E-34 T 22-04-2016 IPR018541 FtsK gamma domain PNUC_RS03600 54c168b0a2b255c801b130a9c5fbe32e 770 SUPERFAMILY SSF46785 704 768 4.19E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03600 54c168b0a2b255c801b130a9c5fbe32e 770 Pfam PF09397 Ftsk gamma domain 706 765 4.5E-24 T 22-04-2016 IPR018541 FtsK gamma domain PNUC_RS03600 54c168b0a2b255c801b130a9c5fbe32e 770 PANTHER PTHR22683:SF41 269 770 6.8E-250 T 22-04-2016 PNUC_RS03600 54c168b0a2b255c801b130a9c5fbe32e 770 SUPERFAMILY SSF52540 384 674 2.26E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03600 54c168b0a2b255c801b130a9c5fbe32e 770 Pfam PF01580 FtsK/SpoIIIE family 393 602 1.1E-63 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 PNUC_RS03600 54c168b0a2b255c801b130a9c5fbe32e 770 PANTHER PTHR22683 269 770 6.8E-250 T 22-04-2016 PNUC_RS01035 81644bc874f4639710e526b6d12d0ef6 334 PANTHER PTHR12001 3 334 1.1E-110 T 22-04-2016 IPR017446 Polyprenyl synthetase-related PNUC_RS01035 81644bc874f4639710e526b6d12d0ef6 334 Gene3D G3DSA:1.10.600.10 12 333 4.4E-99 T 22-04-2016 IPR008949 Isoprenoid synthase domain PNUC_RS01035 81644bc874f4639710e526b6d12d0ef6 334 PANTHER PTHR12001:SF47 3 334 1.1E-110 T 22-04-2016 PNUC_RS01035 81644bc874f4639710e526b6d12d0ef6 334 Pfam PF00348 Polyprenyl synthetase 38 278 5.7E-75 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PNUC_RS01035 81644bc874f4639710e526b6d12d0ef6 334 SUPERFAMILY SSF48576 8 333 1.05E-94 T 22-04-2016 IPR008949 Isoprenoid synthase domain PNUC_RS01035 81644bc874f4639710e526b6d12d0ef6 334 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 212 224 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PNUC_RS01035 81644bc874f4639710e526b6d12d0ef6 334 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 90 104 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 191 6.5E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 167 8.59E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 137 151 8.59E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 179 8.59E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 PANTHER PTHR26402:SF511 4 191 1.3E-32 T 22-04-2016 PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 Gene3D G3DSA:1.10.10.10 130 197 8.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 PANTHER PTHR26402 4 191 1.3E-32 T 22-04-2016 PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 Pfam PF00072 Response regulator receiver domain 7 119 2.1E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 SUPERFAMILY SSF52172 1 149 9.25E-14 T 22-04-2016 IPR011006 CheY-like superfamily PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 SMART SM00421 134 191 4.4E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 Gene3D G3DSA:3.40.50.2300 6 129 1.7E-14 T 22-04-2016 PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 SUPERFAMILY SSF46894 129 197 1.77E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PNUC_RS10820 e9afcb8afe3b4a1f12f5a8498e830d89 197 SMART SM00448 4 121 1.8E-4 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS06855 e88f1e5e647a408342b5ae77196dd816 108 PRINTS PR00421 Thioredoxin family signature 32 41 4.5E-9 T 22-04-2016 PNUC_RS06855 e88f1e5e647a408342b5ae77196dd816 108 PRINTS PR00421 Thioredoxin family signature 24 32 4.5E-9 T 22-04-2016 PNUC_RS06855 e88f1e5e647a408342b5ae77196dd816 108 PRINTS PR00421 Thioredoxin family signature 72 83 4.5E-9 T 22-04-2016 PNUC_RS06855 e88f1e5e647a408342b5ae77196dd816 108 PIRSF PIRSF000077 2 108 2.0E-43 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PNUC_RS06855 e88f1e5e647a408342b5ae77196dd816 108 Pfam PF00085 Thioredoxin 5 106 3.2E-34 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 PNUC_RS06855 e88f1e5e647a408342b5ae77196dd816 108 SUPERFAMILY SSF52833 3 107 2.4E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS06855 e88f1e5e647a408342b5ae77196dd816 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PNUC_RS06855 e88f1e5e647a408342b5ae77196dd816 108 Gene3D G3DSA:3.40.30.10 3 107 2.2E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS06855 e88f1e5e647a408342b5ae77196dd816 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.8E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PNUC_RS06855 e88f1e5e647a408342b5ae77196dd816 108 PANTHER PTHR10438 5 108 1.0E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PNUC_RS08255 c928ec967afd18ad5dcccf32d632d884 301 SUPERFAMILY SSF52540 78 266 5.73E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08255 c928ec967afd18ad5dcccf32d632d884 301 PIRSF PIRSF028756 14 301 2.6E-129 T 22-04-2016 IPR016898 Polyphosphate kinase 2 PNUC_RS08255 c928ec967afd18ad5dcccf32d632d884 301 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 47 272 3.2E-111 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 PNUC_RS08255 c928ec967afd18ad5dcccf32d632d884 301 PANTHER PTHR34383:SF1 1 301 1.4E-199 T 22-04-2016 PNUC_RS08255 c928ec967afd18ad5dcccf32d632d884 301 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 48 272 2.0E-108 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related PNUC_RS08255 c928ec967afd18ad5dcccf32d632d884 301 PANTHER PTHR34383 1 301 1.4E-199 T 22-04-2016 PNUC_RS08255 c928ec967afd18ad5dcccf32d632d884 301 Gene3D G3DSA:3.40.50.300 23 280 6.1E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 234 409 3.1E-35 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 SUPERFAMILY SSF55681 116 428 1.65E-97 T 22-04-2016 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 PANTHER PTHR11778 1 436 3.5E-195 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 432 39.054 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 427 5.0E-158 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 PIRSF PIRSF001529 1 436 2.1E-171 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 Gene3D G3DSA:1.10.287.40 1 104 6.6E-23 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 1.15E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 1.15E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 1.15E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 1.15E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 1.15E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.1E-28 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 Gene3D G3DSA:3.30.930.10 105 431 1.4E-134 T 22-04-2016 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 SUPERFAMILY SSF46589 1 112 1.41E-26 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 PNUC_RS03610 4f0f7443d2806fe4eec25d621dd66acd 436 PANTHER PTHR11778:SF0 1 436 3.5E-195 T 22-04-2016 PNUC_RS00865 a1fa611e1fe6df0d33bcfa299783401e 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 311 36.639 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS00865 a1fa611e1fe6df0d33bcfa299783401e 316 Pfam PF01795 MraW methylase family 3 311 5.5E-100 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS00865 a1fa611e1fe6df0d33bcfa299783401e 316 SUPERFAMILY SSF53335 217 310 5.12E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS00865 a1fa611e1fe6df0d33bcfa299783401e 316 SUPERFAMILY SSF53335 5 116 5.12E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS00865 a1fa611e1fe6df0d33bcfa299783401e 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 310 3.8E-98 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS00865 a1fa611e1fe6df0d33bcfa299783401e 316 PANTHER PTHR11265:SF0 1 313 1.2E-126 T 22-04-2016 PNUC_RS00865 a1fa611e1fe6df0d33bcfa299783401e 316 Gene3D G3DSA:3.40.50.150 220 310 3.6E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS00865 a1fa611e1fe6df0d33bcfa299783401e 316 Gene3D G3DSA:3.40.50.150 6 113 3.6E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS00865 a1fa611e1fe6df0d33bcfa299783401e 316 Gene3D G3DSA:1.10.150.170 116 219 1.4E-36 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS00865 a1fa611e1fe6df0d33bcfa299783401e 316 SUPERFAMILY SSF81799 117 217 1.57E-31 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS00865 a1fa611e1fe6df0d33bcfa299783401e 316 PANTHER PTHR11265 1 313 1.2E-126 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS00865 a1fa611e1fe6df0d33bcfa299783401e 316 PIRSF PIRSF004486 1 312 1.9E-98 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 SUPERFAMILY SSF54913 1 112 1.33E-45 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 Gene3D G3DSA:3.30.70.120 1 112 3.0E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 PANTHER PTHR30115:SF12 1 112 3.2E-68 T 22-04-2016 PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 PANTHER PTHR30115 1 112 3.2E-68 T 22-04-2016 PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.2E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 PRINTS PR00340 P-II protein signature 2 17 5.6E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 PRINTS PR00340 P-II protein signature 83 103 5.6E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 PRINTS PR00340 P-II protein signature 23 41 5.6E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 PRINTS PR00340 P-II protein signature 52 75 5.6E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 SMART SM00938 4 105 1.0E-66 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS10140 cd104efd9e84fbb295484dfae1c15e91 112 PIRSF PIRSF039144 1 112 9.2E-54 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS08870 18a116012bb3d3999f20bea3cb6661b2 304 Gene3D G3DSA:1.10.600.10 5 299 2.1E-87 T 22-04-2016 IPR008949 Isoprenoid synthase domain PNUC_RS08870 18a116012bb3d3999f20bea3cb6661b2 304 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 223 235 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PNUC_RS08870 18a116012bb3d3999f20bea3cb6661b2 304 Pfam PF00348 Polyprenyl synthetase 35 283 4.1E-56 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PNUC_RS08870 18a116012bb3d3999f20bea3cb6661b2 304 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 93 109 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PNUC_RS08870 18a116012bb3d3999f20bea3cb6661b2 304 PANTHER PTHR12001 2 291 1.9E-101 T 22-04-2016 IPR017446 Polyprenyl synthetase-related PNUC_RS08870 18a116012bb3d3999f20bea3cb6661b2 304 PANTHER PTHR12001:SF23 2 291 1.9E-101 T 22-04-2016 PNUC_RS08870 18a116012bb3d3999f20bea3cb6661b2 304 SUPERFAMILY SSF48576 8 293 3.84E-82 T 22-04-2016 IPR008949 Isoprenoid synthase domain PNUC_RS10515 8a48fbaa4fc29ae6666b4f03a15ecf86 472 Gene3D G3DSA:1.10.510.10 122 324 4.7E-45 T 22-04-2016 PNUC_RS10515 8a48fbaa4fc29ae6666b4f03a15ecf86 472 Pfam PF00069 Protein kinase domain 27 272 1.8E-37 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PNUC_RS10515 8a48fbaa4fc29ae6666b4f03a15ecf86 472 SUPERFAMILY SSF52402 399 471 6.78E-8 T 22-04-2016 PNUC_RS10515 8a48fbaa4fc29ae6666b4f03a15ecf86 472 SUPERFAMILY SSF52402 336 358 6.78E-8 T 22-04-2016 PNUC_RS10515 8a48fbaa4fc29ae6666b4f03a15ecf86 472 Gene3D G3DSA:3.30.200.20 18 121 4.7E-9 T 22-04-2016 PNUC_RS10515 8a48fbaa4fc29ae6666b4f03a15ecf86 472 Pfam PF00582 Universal stress protein family 346 471 2.0E-8 T 22-04-2016 IPR006016 UspA GO:0006950 PNUC_RS10515 8a48fbaa4fc29ae6666b4f03a15ecf86 472 SMART SM00220 23 281 2.0E-36 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PNUC_RS10515 8a48fbaa4fc29ae6666b4f03a15ecf86 472 PANTHER PTHR24362:SF160 19 300 1.4E-64 T 22-04-2016 PNUC_RS10515 8a48fbaa4fc29ae6666b4f03a15ecf86 472 SUPERFAMILY SSF56112 19 294 3.1E-59 T 22-04-2016 IPR011009 Protein kinase-like domain PNUC_RS10515 8a48fbaa4fc29ae6666b4f03a15ecf86 472 PANTHER PTHR24362 19 300 1.4E-64 T 22-04-2016 PNUC_RS10515 8a48fbaa4fc29ae6666b4f03a15ecf86 472 Gene3D G3DSA:3.40.50.620 347 471 1.1E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS07865 64c2a7ff83a868af4429ad4212d6470a 146 Gene3D G3DSA:3.30.428.10 2 143 5.1E-41 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 PNUC_RS07865 64c2a7ff83a868af4429ad4212d6470a 146 PANTHER PTHR23089 26 123 1.5E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein PNUC_RS07865 64c2a7ff83a868af4429ad4212d6470a 146 PANTHER PTHR23089:SF13 26 123 1.5E-19 T 22-04-2016 PNUC_RS07865 64c2a7ff83a868af4429ad4212d6470a 146 Pfam PF01230 HIT domain 17 102 6.0E-16 T 22-04-2016 IPR001310 Histidine triad (HIT) protein PNUC_RS07865 64c2a7ff83a868af4429ad4212d6470a 146 PIRSF PIRSF000714 6 145 3.0E-41 T 22-04-2016 IPR026026 Histidine triad hydrolase, Hint-type PNUC_RS07865 64c2a7ff83a868af4429ad4212d6470a 146 SUPERFAMILY SSF54197 1 139 1.18E-40 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 446 1.4E-10 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 PANTHER PTHR22573 7 460 8.5E-179 T 22-04-2016 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 SUPERFAMILY SSF53738 154 255 3.45E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 SUPERFAMILY SSF55957 366 461 5.58E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 Gene3D G3DSA:3.40.120.10 251 365 4.5E-45 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 253 9.9E-25 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 141 7.2E-36 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 Gene3D G3DSA:3.40.120.10 4 138 1.6E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 SUPERFAMILY SSF53738 258 362 1.18E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 SUPERFAMILY SSF53738 4 177 2.51E-38 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 204 217 3.9E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 3.9E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 3.9E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 3.9E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 Gene3D G3DSA:3.30.310.50 369 459 2.8E-26 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 Gene3D G3DSA:3.40.120.10 172 249 1.9E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 PANTHER PTHR22573:SF28 7 460 8.5E-179 T 22-04-2016 PNUC_RS05710 507da7395a2d9137df354d9fe1784dfb 461 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 1.2E-23 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05365 a250b88c35e8b73b536cc0f334fbb089 236 PANTHER PTHR30231:SF0 1 177 1.5E-91 T 22-04-2016 PNUC_RS05365 a250b88c35e8b73b536cc0f334fbb089 236 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 212 5.8E-57 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS05365 a250b88c35e8b73b536cc0f334fbb089 236 PANTHER PTHR30231 1 177 1.5E-91 T 22-04-2016 PNUC_RS05365 a250b88c35e8b73b536cc0f334fbb089 236 Gene3D G3DSA:3.30.420.10 1 175 1.7E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS05365 a250b88c35e8b73b536cc0f334fbb089 236 SMART SM00479 2 174 5.0E-46 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PNUC_RS05365 a250b88c35e8b73b536cc0f334fbb089 236 SUPERFAMILY SSF53098 1 176 2.86E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS05365 a250b88c35e8b73b536cc0f334fbb089 236 Pfam PF00929 Exonuclease 4 165 1.8E-34 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PNUC_RS05365 a250b88c35e8b73b536cc0f334fbb089 236 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 229 1.9E-85 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS02560 b4920ca3df966b4c9d1e158aa1c74610 224 Gene3D G3DSA:1.10.150.240 23 80 7.8E-5 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PNUC_RS02560 b4920ca3df966b4c9d1e158aa1c74610 224 Gene3D G3DSA:3.40.50.1000 3 22 5.2E-39 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS02560 b4920ca3df966b4c9d1e158aa1c74610 224 Gene3D G3DSA:3.40.50.1000 81 219 5.2E-39 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS02560 b4920ca3df966b4c9d1e158aa1c74610 224 PANTHER PTHR18901:SF24 1 222 8.7E-84 T 22-04-2016 PNUC_RS02560 b4920ca3df966b4c9d1e158aa1c74610 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 8.4E-33 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS02560 b4920ca3df966b4c9d1e158aa1c74610 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 86 183 4.5E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS02560 b4920ca3df966b4c9d1e158aa1c74610 224 SUPERFAMILY SSF56784 7 219 8.15E-53 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS02560 b4920ca3df966b4c9d1e158aa1c74610 224 PANTHER PTHR18901 1 222 8.7E-84 T 22-04-2016 PNUC_RS02560 b4920ca3df966b4c9d1e158aa1c74610 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 187 9.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS05880 938f7209ad8f64ebbfe507e42b6d7450 201 SMART SM00479 6 189 0.0034 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PNUC_RS05880 938f7209ad8f64ebbfe507e42b6d7450 201 Pfam PF00929 Exonuclease 10 180 1.5E-5 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PNUC_RS05880 938f7209ad8f64ebbfe507e42b6d7450 201 Gene3D G3DSA:3.30.420.10 7 188 9.5E-25 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS05880 938f7209ad8f64ebbfe507e42b6d7450 201 SUPERFAMILY SSF53098 6 188 2.69E-21 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS04230 1a80721b582ed303a0921ddebe25a84c 148 PANTHER PTHR30574:SF1 14 141 6.2E-36 T 22-04-2016 PNUC_RS04230 1a80721b582ed303a0921ddebe25a84c 148 PANTHER PTHR30574 14 141 6.2E-36 T 22-04-2016 PNUC_RS09250 1969acab7dc8f96bf2f0525a1823c622 496 Pfam PF02913 FAD linked oxidases, C-terminal domain 227 467 2.3E-64 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PNUC_RS09250 1969acab7dc8f96bf2f0525a1823c622 496 Gene3D G3DSA:3.30.43.10 13 106 4.5E-26 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PNUC_RS09250 1969acab7dc8f96bf2f0525a1823c622 496 Gene3D G3DSA:1.10.45.10 429 468 1.4E-4 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PNUC_RS09250 1969acab7dc8f96bf2f0525a1823c622 496 SUPERFAMILY SSF55103 202 471 2.62E-71 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PNUC_RS09250 1969acab7dc8f96bf2f0525a1823c622 496 PANTHER PTHR11748 10 482 1.8E-184 T 22-04-2016 PNUC_RS09250 1969acab7dc8f96bf2f0525a1823c622 496 PANTHER PTHR11748:SF78 10 482 1.8E-184 T 22-04-2016 PNUC_RS09250 1969acab7dc8f96bf2f0525a1823c622 496 SUPERFAMILY SSF56176 16 228 3.88E-65 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PNUC_RS09250 1969acab7dc8f96bf2f0525a1823c622 496 Pfam PF01565 FAD binding domain 53 191 7.5E-35 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PNUC_RS09250 1969acab7dc8f96bf2f0525a1823c622 496 Gene3D G3DSA:3.30.465.10 108 228 1.7E-31 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PNUC_RS01665 69459efa0412ea925a1c1595bd550ee9 322 PANTHER PTHR22916 18 228 3.0E-20 T 22-04-2016 PNUC_RS01665 69459efa0412ea925a1c1595bd550ee9 322 Pfam PF00535 Glycosyl transferase family 2 22 165 3.9E-15 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PNUC_RS01665 69459efa0412ea925a1c1595bd550ee9 322 Gene3D G3DSA:3.90.550.10 18 255 2.0E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS01665 69459efa0412ea925a1c1595bd550ee9 322 PANTHER PTHR22916:SF23 18 228 3.0E-20 T 22-04-2016 PNUC_RS01665 69459efa0412ea925a1c1595bd550ee9 322 SUPERFAMILY SSF53448 18 251 1.13E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS02425 a2ae2dfcccafc966152c105033c68ff8 146 Gene3D G3DSA:3.40.50.620 1 144 4.7E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS02425 a2ae2dfcccafc966152c105033c68ff8 146 PIRSF PIRSF006276 1 146 2.9E-17 T 22-04-2016 IPR006015 Universal stress protein A PNUC_RS02425 a2ae2dfcccafc966152c105033c68ff8 146 Pfam PF00582 Universal stress protein family 1 144 7.9E-31 T 22-04-2016 IPR006016 UspA GO:0006950 PNUC_RS02425 a2ae2dfcccafc966152c105033c68ff8 146 PANTHER PTHR31964:SF45 1 144 1.8E-21 T 22-04-2016 PNUC_RS02425 a2ae2dfcccafc966152c105033c68ff8 146 SUPERFAMILY SSF52402 1 145 4.86E-30 T 22-04-2016 PNUC_RS02425 a2ae2dfcccafc966152c105033c68ff8 146 PANTHER PTHR31964 1 144 1.8E-21 T 22-04-2016 PNUC_RS02425 a2ae2dfcccafc966152c105033c68ff8 146 PRINTS PR01438 Universal stress protein signature 106 118 1.9E-14 T 22-04-2016 IPR006015 Universal stress protein A PNUC_RS02425 a2ae2dfcccafc966152c105033c68ff8 146 PRINTS PR01438 Universal stress protein signature 2 20 1.9E-14 T 22-04-2016 IPR006015 Universal stress protein A PNUC_RS02425 a2ae2dfcccafc966152c105033c68ff8 146 PRINTS PR01438 Universal stress protein signature 124 146 1.9E-14 T 22-04-2016 IPR006015 Universal stress protein A PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 SUPERFAMILY SSF81593 173 299 2.82E-8 T 22-04-2016 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 Pfam PF01909 Nucleotidyltransferase domain 58 97 7.0E-6 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 865 302.753 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 SMART SM00471 442 589 7.9E-5 T 22-04-2016 IPR003607 HD/PDEase domain PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 SUPERFAMILY SSF81301 17 158 7.8E-20 T 22-04-2016 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 SUPERFAMILY SSF109604 410 537 1.48E-12 T 22-04-2016 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 Gene3D G3DSA:3.30.460.10 62 154 4.4E-8 T 22-04-2016 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 Gene3D G3DSA:3.30.70.260 793 856 1.0E-10 T 22-04-2016 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 Gene3D G3DSA:3.30.70.260 682 734 8.6E-4 T 22-04-2016 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 Gene3D G3DSA:1.10.3210.10 416 603 2.0E-23 T 22-04-2016 IPR006674 HD domain PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 SUPERFAMILY SSF55021 792 842 3.82E-8 T 22-04-2016 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 SUPERFAMILY SSF55021 680 737 8.02E-9 T 22-04-2016 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 PANTHER PTHR13734 273 680 2.8E-102 T 22-04-2016 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 PIRSF PIRSF006288 2 865 3.1E-293 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 Pfam PF01966 HD domain 447 549 1.7E-10 T 22-04-2016 IPR006674 HD domain PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 20 861 2.0E-239 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 PANTHER PTHR13734:SF45 273 680 2.8E-102 T 22-04-2016 PNUC_RS07600 707508f6bdbf62e41ec3844d488fe117 865 Pfam PF08335 GlnD PII-uridylyltransferase 167 305 1.0E-32 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PNUC_RS00260 61bbf4df665fe5267b7966a04f719606 143 PANTHER PTHR11661 1 142 5.1E-71 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00260 61bbf4df665fe5267b7966a04f719606 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-15 T 22-04-2016 PNUC_RS00260 61bbf4df665fe5267b7966a04f719606 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 4.9E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal PNUC_RS00260 61bbf4df665fe5267b7966a04f719606 143 SUPERFAMILY SSF54747 3 73 1.96E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal PNUC_RS00260 61bbf4df665fe5267b7966a04f719606 143 SUPERFAMILY SSF46906 68 141 6.28E-27 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PNUC_RS00260 61bbf4df665fe5267b7966a04f719606 143 SMART SM00649 9 141 2.5E-84 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00260 61bbf4df665fe5267b7966a04f719606 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 PNUC_RS00260 61bbf4df665fe5267b7966a04f719606 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 7.5E-65 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 PNUC_RS00260 61bbf4df665fe5267b7966a04f719606 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 6.5E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PNUC_RS00260 61bbf4df665fe5267b7966a04f719606 143 Gene3D G3DSA:1.10.10.250 73 141 4.4E-31 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PNUC_RS00260 61bbf4df665fe5267b7966a04f719606 143 Gene3D G3DSA:3.30.1550.10 2 72 2.0E-37 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal PNUC_RS00260 61bbf4df665fe5267b7966a04f719606 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.168 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 SUPERFAMILY SSF51735 172 325 2.95E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 334 429 2.9E-26 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 429 28.506 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 PANTHER PTHR13812 1 418 2.4E-100 T 22-04-2016 PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 108 131 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 181 317 1.1E-42 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 PANTHER PTHR13812:SF18 1 418 2.4E-100 T 22-04-2016 PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 PIRSF PIRSF000445 1 438 3.2E-140 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 SUPERFAMILY SSF69742 1 167 7.32E-45 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 165 2.5E-48 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 429 2.5E-120 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 Gene3D G3DSA:3.40.50.720 192 371 2.5E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS00745 83dded685c29a8340d418877e35decfa 438 SUPERFAMILY SSF69075 331 430 8.63E-26 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PNUC_RS06560 8e6ceb664137dc63cf2923652b03fb33 428 PANTHER PTHR33055 222 404 7.2E-30 T 22-04-2016 PNUC_RS06560 8e6ceb664137dc63cf2923652b03fb33 428 PANTHER PTHR33055 10 166 7.2E-30 T 22-04-2016 PNUC_RS06560 8e6ceb664137dc63cf2923652b03fb33 428 PANTHER PTHR33055:SF3 222 404 7.2E-30 T 22-04-2016 PNUC_RS06560 8e6ceb664137dc63cf2923652b03fb33 428 PANTHER PTHR33055:SF3 10 166 7.2E-30 T 22-04-2016 PNUC_RS06560 8e6ceb664137dc63cf2923652b03fb33 428 Pfam PF02371 Transposase IS116/IS110/IS902 family 279 364 4.3E-24 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PNUC_RS06560 8e6ceb664137dc63cf2923652b03fb33 428 Pfam PF01548 Transposase 14 169 4.4E-20 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PNUC_RS03325 0f9e43b5b18a79c950b17a1253cc549d 569 PANTHER PTHR18968:SF138 12 555 1.4E-199 T 22-04-2016 PNUC_RS03325 0f9e43b5b18a79c950b17a1253cc549d 569 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 333 1.3E-31 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PNUC_RS03325 0f9e43b5b18a79c950b17a1253cc549d 569 SUPERFAMILY SSF52518 12 183 1.67E-43 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS03325 0f9e43b5b18a79c950b17a1253cc549d 569 TIGRFAM TIGR03254 oxalate_oxc: oxalyl-CoA decarboxylase 10 562 8.9E-298 T 22-04-2016 IPR017660 Oxalyl-CoA decarboxylase GO:0008949|GO:0030976|GO:0033611|GO:0046872 KEGG: 00630+4.1.1.8|MetaCyc: PWY-6695|MetaCyc: PWY-6696|UniPathway: UPA00540 PNUC_RS03325 0f9e43b5b18a79c950b17a1253cc549d 569 SUPERFAMILY SSF52518 372 550 6.97E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS03325 0f9e43b5b18a79c950b17a1253cc549d 569 Gene3D G3DSA:3.40.50.970 5 185 7.9E-48 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS03325 0f9e43b5b18a79c950b17a1253cc549d 569 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 405 543 8.9E-27 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PNUC_RS03325 0f9e43b5b18a79c950b17a1253cc549d 569 SUPERFAMILY SSF52467 199 357 4.09E-39 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PNUC_RS03325 0f9e43b5b18a79c950b17a1253cc549d 569 Gene3D G3DSA:3.40.50.970 346 551 5.5E-48 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS03325 0f9e43b5b18a79c950b17a1253cc549d 569 PANTHER PTHR18968 12 555 1.4E-199 T 22-04-2016 PNUC_RS03325 0f9e43b5b18a79c950b17a1253cc549d 569 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 180 2.2E-45 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PNUC_RS03325 0f9e43b5b18a79c950b17a1253cc549d 569 Gene3D G3DSA:3.40.50.1220 195 343 1.4E-38 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PNUC_RS04615 1557761b6c525a9bd1c739f49e09b0f2 434 PANTHER PTHR30217:SF6 1 420 1.6E-189 T 22-04-2016 PNUC_RS04615 1557761b6c525a9bd1c739f49e09b0f2 434 Pfam PF01136 Peptidase family U32 79 321 1.0E-98 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS04615 1557761b6c525a9bd1c739f49e09b0f2 434 PANTHER PTHR30217 1 420 1.6E-189 T 22-04-2016 PNUC_RS04615 1557761b6c525a9bd1c739f49e09b0f2 434 ProSitePatterns PS01276 Peptidase family U32 signature. 164 182 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS04615 1557761b6c525a9bd1c739f49e09b0f2 434 Pfam PF16325 Peptidase family U32 C-terminal domain 338 416 4.1E-20 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 463 2.3E-207 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 PANTHER PTHR23135:SF17 1 463 7.6E-235 T 22-04-2016 PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 SUPERFAMILY SSF53244 318 462 2.09E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 Gene3D G3DSA:3.40.50.720 1 93 1.4E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 SUPERFAMILY SSF53623 101 316 2.35E-49 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 Pfam PF08245 Mur ligase middle domain 111 298 3.3E-22 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 367 1.9E-10 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 Gene3D G3DSA:3.90.190.20 320 462 2.1E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 464 56.679 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 SUPERFAMILY SSF51984 1 93 3.79E-20 T 22-04-2016 PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 PANTHER PTHR23135 1 463 7.6E-235 T 22-04-2016 PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 Pfam PF01225 Mur ligase family, catalytic domain 2 101 4.7E-19 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS01140 940e5f978634d2bd294fb530da1b3f40 465 Gene3D G3DSA:3.40.1190.10 95 319 1.3E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 SUPERFAMILY SSF52540 151 341 1.64E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 4.4E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 4.4E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 4.4E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 4.4E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 Gene3D G3DSA:2.70.210.12 2 156 3.2E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 PANTHER PTHR11702:SF3 1 355 2.1E-161 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 Gene3D G3DSA:3.40.50.300 160 346 5.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 PIRSF PIRSF002401 1 361 8.7E-133 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 SUPERFAMILY SSF82051 2 158 3.79E-54 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 Pfam PF01926 50S ribosome-binding GTPase 161 285 5.3E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 PANTHER PTHR11702 1 355 2.1E-161 T 22-04-2016 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 1.0E-141 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 Pfam PF01018 GTP1/OBG 3 158 3.1E-57 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 PNUC_RS01050 42b21320e5b7e3469cb58da00755acbd 362 Hamap MF_01454 GTPase Obg [obg]. 2 334 46.966 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PNUC_RS07855 69b70d0b502b45b4ba75deed68802f27 214 PANTHER PTHR13707 2 209 8.2E-74 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS07855 69b70d0b502b45b4ba75deed68802f27 214 Pfam PF01144 Coenzyme A transferase 8 187 1.3E-34 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS07855 69b70d0b502b45b4ba75deed68802f27 214 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 45 53 - T 22-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 PNUC_RS07855 69b70d0b502b45b4ba75deed68802f27 214 SUPERFAMILY SSF100950 7 209 4.83E-57 T 22-04-2016 PNUC_RS07855 69b70d0b502b45b4ba75deed68802f27 214 SMART SM00882 7 204 6.1E-59 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS07855 69b70d0b502b45b4ba75deed68802f27 214 PANTHER PTHR13707:SF34 2 209 8.2E-74 T 22-04-2016 PNUC_RS07855 69b70d0b502b45b4ba75deed68802f27 214 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 6 207 3.8E-83 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 PNUC_RS07855 69b70d0b502b45b4ba75deed68802f27 214 Gene3D G3DSA:3.40.810.20 8 208 6.6E-69 T 22-04-2016 PNUC_RS10005 67f7d4ba9ce70b4805f73ec410340cfa 196 Pfam PF02630 SCO1/SenC 30 174 8.1E-36 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC PNUC_RS10005 67f7d4ba9ce70b4805f73ec410340cfa 196 PANTHER PTHR12151 26 196 9.6E-54 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC PNUC_RS10005 67f7d4ba9ce70b4805f73ec410340cfa 196 SUPERFAMILY SSF52833 38 196 7.06E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS10005 67f7d4ba9ce70b4805f73ec410340cfa 196 Gene3D G3DSA:3.40.30.10 11 196 1.5E-59 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS06700 5841db51aea194696800b0224bfc5ace 410 PANTHER PTHR23501:SF19 10 387 1.6E-101 T 22-04-2016 PNUC_RS06700 5841db51aea194696800b0224bfc5ace 410 Gene3D G3DSA:1.20.1250.20 224 408 1.9E-17 T 22-04-2016 PNUC_RS06700 5841db51aea194696800b0224bfc5ace 410 SUPERFAMILY SSF103473 9 409 8.11E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS06700 5841db51aea194696800b0224bfc5ace 410 Gene3D G3DSA:1.20.1250.20 18 195 2.8E-28 T 22-04-2016 PNUC_RS06700 5841db51aea194696800b0224bfc5ace 410 Pfam PF07690 Major Facilitator Superfamily 24 242 7.2E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS06700 5841db51aea194696800b0224bfc5ace 410 PANTHER PTHR23501 10 387 1.6E-101 T 22-04-2016 PNUC_RS02500 6cb53f2219eee6239009a1dbf7f258ac 325 PIRSF PIRSF017082 1 324 3.8E-85 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS02500 6cb53f2219eee6239009a1dbf7f258ac 325 SUPERFAMILY SSF53850 116 287 1.32E-14 T 22-04-2016 PNUC_RS02500 6cb53f2219eee6239009a1dbf7f258ac 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 321 7.8E-92 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS02500 6cb53f2219eee6239009a1dbf7f258ac 325 PANTHER PTHR30349 8 294 1.0E-90 T 22-04-2016 PNUC_RS02500 6cb53f2219eee6239009a1dbf7f258ac 325 PANTHER PTHR30349:SF32 8 294 1.0E-90 T 22-04-2016 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 Pfam PF13365 Trypsin-like peptidase domain 109 240 2.0E-35 T 22-04-2016 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 Pfam PF13180 PDZ domain 280 370 3.0E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 Gene3D G3DSA:2.30.42.10 395 481 2.9E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 Gene3D G3DSA:2.30.42.10 281 377 1.8E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 34 478 1.4E-150 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 SUPERFAMILY SSF50494 33 270 8.5E-67 T 22-04-2016 IPR009003 Peptidase S1, PA clan PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 PRINTS PR00834 HtrA/DegQ protease family signature 233 250 9.4E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 PRINTS PR00834 HtrA/DegQ protease family signature 319 331 9.4E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 PRINTS PR00834 HtrA/DegQ protease family signature 118 130 9.4E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 PRINTS PR00834 HtrA/DegQ protease family signature 211 228 9.4E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 PRINTS PR00834 HtrA/DegQ protease family signature 139 159 9.4E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 PRINTS PR00834 HtrA/DegQ protease family signature 179 203 9.4E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 Gene3D G3DSA:2.40.10.10 171 280 6.0E-45 T 22-04-2016 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 PANTHER PTHR22939:SF98 91 384 4.1E-127 T 22-04-2016 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 PANTHER PTHR22939:SF98 22 56 4.1E-127 T 22-04-2016 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 SUPERFAMILY SSF50156 393 481 1.09E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 SMART SM00228 279 361 7.1E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 SMART SM00228 394 473 9.1E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 Gene3D G3DSA:2.40.10.10 33 170 5.4E-38 T 22-04-2016 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 PANTHER PTHR22939 91 384 4.1E-127 T 22-04-2016 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 PANTHER PTHR22939 22 56 4.1E-127 T 22-04-2016 PNUC_RS02110 980da0d1066c77cce9ae04f793ddca75 483 SUPERFAMILY SSF50156 237 361 2.37E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS03875 0a479ceb16f977fd780038a40e54b793 248 SUPERFAMILY SSF55729 85 244 1.91E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS03875 0a479ceb16f977fd780038a40e54b793 248 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 110 237 1.4E-37 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 PNUC_RS03875 0a479ceb16f977fd780038a40e54b793 248 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 3 246 43.113 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic PNUC_RS03875 0a479ceb16f977fd780038a40e54b793 248 PANTHER PTHR21367:SF0 20 245 6.8E-52 T 22-04-2016 PNUC_RS03875 0a479ceb16f977fd780038a40e54b793 248 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 90 1.4E-19 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 PNUC_RS03875 0a479ceb16f977fd780038a40e54b793 248 PANTHER PTHR21367 20 245 6.8E-52 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase PNUC_RS03875 0a479ceb16f977fd780038a40e54b793 248 PIRSF PIRSF037208 3 248 1.1E-86 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 Gene3D G3DSA:3.40.30.10 113 175 2.6E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 361 376 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 Pfam PF10531 SLBB domain 437 486 4.0E-9 T 22-04-2016 IPR019554 Soluble ligand binding domain PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 SUPERFAMILY SSF140490 523 599 1.44E-24 T 22-04-2016 PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 SMART SM00928 523 568 2.7E-20 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 252 412 6.7E-38 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 524 599 6.5E-21 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 SUPERFAMILY SSF142984 435 517 1.44E-20 T 22-04-2016 PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 PANTHER PTHR11780:SF10 112 599 4.4E-156 T 22-04-2016 PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 45 182 1.2E-24 T 22-04-2016 PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 PANTHER PTHR11780 112 599 4.4E-156 T 22-04-2016 PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 SUPERFAMILY SSF52833 37 189 1.34E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 SUPERFAMILY SSF142019 214 433 1.7E-65 T 22-04-2016 PNUC_RS05805 ebb63b606ad9bc745d2f721a3c10f566 600 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 536 547 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 PNUC_RS00080 4774e5f05962ab88d6ae97299f019238 222 Pfam PF02527 rRNA small subunit methyltransferase G 23 208 9.2E-48 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PNUC_RS00080 4774e5f05962ab88d6ae97299f019238 222 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 212 1.8E-46 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PNUC_RS00080 4774e5f05962ab88d6ae97299f019238 222 PANTHER PTHR31760:SF0 5 212 6.2E-51 T 22-04-2016 PNUC_RS00080 4774e5f05962ab88d6ae97299f019238 222 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 211 26.164 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PNUC_RS00080 4774e5f05962ab88d6ae97299f019238 222 Gene3D G3DSA:3.40.50.150 9 214 1.7E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS00080 4774e5f05962ab88d6ae97299f019238 222 PIRSF PIRSF003078 4 217 3.7E-51 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PNUC_RS00080 4774e5f05962ab88d6ae97299f019238 222 SUPERFAMILY SSF53335 3 215 6.39E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS00080 4774e5f05962ab88d6ae97299f019238 222 PANTHER PTHR31760 5 212 6.2E-51 T 22-04-2016 PNUC_RS00755 106c18d9d1b7bff5a33c2b90acb1a731 264 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 11 234 2.4E-56 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 PNUC_RS00755 106c18d9d1b7bff5a33c2b90acb1a731 264 Gene3D G3DSA:3.40.470.10 6 240 1.1E-67 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PNUC_RS00755 106c18d9d1b7bff5a33c2b90acb1a731 264 PANTHER PTHR11264 9 250 8.7E-68 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 PNUC_RS00755 106c18d9d1b7bff5a33c2b90acb1a731 264 SUPERFAMILY SSF52141 9 241 9.38E-64 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PNUC_RS00755 106c18d9d1b7bff5a33c2b90acb1a731 264 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 10 241 34.079 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 PNUC_RS00755 106c18d9d1b7bff5a33c2b90acb1a731 264 Pfam PF03167 Uracil DNA glycosylase superfamily 61 229 4.0E-18 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PNUC_RS00755 106c18d9d1b7bff5a33c2b90acb1a731 264 SMART SM00986 56 230 1.1E-13 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PNUC_RS00755 106c18d9d1b7bff5a33c2b90acb1a731 264 SMART SM00987 56 230 1.1E-13 T 22-04-2016 PNUC_RS00755 106c18d9d1b7bff5a33c2b90acb1a731 264 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 64 73 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 PNUC_RS00620 9f48d4be362af07ce900519adc6c18f0 137 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 45 119 7.6E-35 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 PNUC_RS00620 9f48d4be362af07ce900519adc6c18f0 137 SUPERFAMILY SSF141734 19 126 1.44E-46 T 22-04-2016 PNUC_RS00620 9f48d4be362af07ce900519adc6c18f0 137 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 68 122 7.0E-20 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 PNUC_RS00620 9f48d4be362af07ce900519adc6c18f0 137 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 19 123 30.824 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 PNUC_RS00620 9f48d4be362af07ce900519adc6c18f0 137 PANTHER PTHR21256 1 123 7.7E-56 T 22-04-2016 PNUC_RS07525 db38511b3fef2c1383c4e541121948ed 403 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 3 394 35.129 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 PNUC_RS07525 db38511b3fef2c1383c4e541121948ed 403 SUPERFAMILY SSF53756 5 369 9.21E-21 T 22-04-2016 PNUC_RS07525 db38511b3fef2c1383c4e541121948ed 403 Gene3D G3DSA:3.40.50.2000 162 369 2.0E-6 T 22-04-2016 PNUC_RS07525 db38511b3fef2c1383c4e541121948ed 403 Pfam PF02684 Lipid-A-disaccharide synthetase 8 378 1.1E-86 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 PNUC_RS07525 db38511b3fef2c1383c4e541121948ed 403 PANTHER PTHR30372 10 380 1.7E-93 T 22-04-2016 PNUC_RS07525 db38511b3fef2c1383c4e541121948ed 403 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 388 8.3E-89 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 PNUC_RS07525 db38511b3fef2c1383c4e541121948ed 403 PANTHER PTHR30372:SF0 10 380 1.7E-93 T 22-04-2016 PNUC_RS06730 d323d468cacd672306224cd6d5400266 289 Pfam PF01145 SPFH domain / Band 7 family 26 202 6.4E-29 T 22-04-2016 IPR001107 Band 7 domain PNUC_RS06730 d323d468cacd672306224cd6d5400266 289 PANTHER PTHR10264 5 286 2.8E-74 T 22-04-2016 IPR001972 Stomatin family GO:0016020 PNUC_RS06730 d323d468cacd672306224cd6d5400266 289 PIRSF PIRSF005651 1 289 2.0E-89 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 PNUC_RS06730 d323d468cacd672306224cd6d5400266 289 SMART SM00244 22 187 1.1E-24 T 22-04-2016 IPR001107 Band 7 domain PNUC_RS06730 d323d468cacd672306224cd6d5400266 289 SUPERFAMILY SSF117892 57 193 1.7E-25 T 22-04-2016 IPR001107 Band 7 domain PNUC_RS06730 d323d468cacd672306224cd6d5400266 289 PANTHER PTHR10264:SF80 5 286 2.8E-74 T 22-04-2016 PNUC_RS06730 d323d468cacd672306224cd6d5400266 289 TIGRFAM TIGR01932 hflC: HflC protein 155 287 2.6E-47 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 PNUC_RS07135 5c582e135edcf3a9b575ce7bab207d39 471 SUPERFAMILY SSF56281 1 469 7.58E-118 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS07135 5c582e135edcf3a9b575ce7bab207d39 471 Pfam PF10996 Beta-Casp domain 260 385 1.3E-23 T 22-04-2016 IPR022712 Beta-Casp domain PNUC_RS07135 5c582e135edcf3a9b575ce7bab207d39 471 Gene3D G3DSA:3.60.15.10 1 104 1.9E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS07135 5c582e135edcf3a9b575ce7bab207d39 471 Gene3D G3DSA:3.60.15.10 142 273 1.9E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS07135 5c582e135edcf3a9b575ce7bab207d39 471 Pfam PF16661 Metallo-beta-lactamase superfamily domain 30 174 3.9E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS07135 5c582e135edcf3a9b575ce7bab207d39 471 SMART SM01027 260 385 1.9E-47 T 22-04-2016 IPR022712 Beta-Casp domain PNUC_RS07135 5c582e135edcf3a9b575ce7bab207d39 471 PANTHER PTHR11203:SF11 1 470 1.0E-109 T 22-04-2016 PNUC_RS07135 5c582e135edcf3a9b575ce7bab207d39 471 SMART SM00849 15 244 2.5E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS07135 5c582e135edcf3a9b575ce7bab207d39 471 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 400 463 8.7E-17 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain PNUC_RS07135 5c582e135edcf3a9b575ce7bab207d39 471 PANTHER PTHR11203 1 470 1.0E-109 T 22-04-2016 PNUC_RS09000 ff8b8e03472a5e9d14b042062a59858c 311 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 287 37.316 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 PNUC_RS09000 ff8b8e03472a5e9d14b042062a59858c 311 PANTHER PTHR30426 5 309 1.7E-148 T 22-04-2016 PNUC_RS09000 ff8b8e03472a5e9d14b042062a59858c 311 Pfam PF02401 LytB protein 7 283 4.4E-92 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 PNUC_RS09000 ff8b8e03472a5e9d14b042062a59858c 311 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 286 6.1E-101 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 PNUC_RS03905 9a61c967c47c9711af1112ddc319b7a9 437 Gene3D G3DSA:3.40.50.300 11 151 2.8E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03905 9a61c967c47c9711af1112ddc319b7a9 437 Pfam PF12002 MgsA AAA+ ATPase C terminal 261 425 6.5E-68 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal PNUC_RS03905 9a61c967c47c9711af1112ddc319b7a9 437 SUPERFAMILY SSF48019 245 427 5.38E-74 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 PNUC_RS03905 9a61c967c47c9711af1112ddc319b7a9 437 PANTHER PTHR13779 12 437 5.4E-183 T 22-04-2016 PNUC_RS03905 9a61c967c47c9711af1112ddc319b7a9 437 SUPERFAMILY SSF52540 10 215 2.88E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03905 9a61c967c47c9711af1112ddc319b7a9 437 Pfam PF16193 AAA C-terminal domain 182 260 1.9E-21 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain PNUC_RS03905 9a61c967c47c9711af1112ddc319b7a9 437 Gene3D G3DSA:1.10.8.60 152 214 3.9E-10 T 22-04-2016 PNUC_RS03905 9a61c967c47c9711af1112ddc319b7a9 437 PANTHER PTHR13779:SF7 12 437 5.4E-183 T 22-04-2016 PNUC_RS03905 9a61c967c47c9711af1112ddc319b7a9 437 Gene3D G3DSA:1.20.272.10 242 340 7.2E-44 T 22-04-2016 PNUC_RS03905 9a61c967c47c9711af1112ddc319b7a9 437 SMART SM00382 46 163 1.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS03905 9a61c967c47c9711af1112ddc319b7a9 437 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 159 1.1E-15 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS03905 9a61c967c47c9711af1112ddc319b7a9 437 Gene3D G3DSA:1.10.3710.10 341 436 5.1E-34 T 22-04-2016 PNUC_RS09765 35a9ef1a805eb42d82cdd74ea8debb6e 124 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 21 123 4.5E-39 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 PNUC_RS09765 35a9ef1a805eb42d82cdd74ea8debb6e 124 Gene3D G3DSA:2.60.300.12 16 110 4.9E-34 T 22-04-2016 IPR000361 FeS cluster biogenesis PNUC_RS09765 35a9ef1a805eb42d82cdd74ea8debb6e 124 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 6.7E-21 T 22-04-2016 IPR000361 FeS cluster biogenesis PNUC_RS09765 35a9ef1a805eb42d82cdd74ea8debb6e 124 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 105 122 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site PNUC_RS09765 35a9ef1a805eb42d82cdd74ea8debb6e 124 SUPERFAMILY SSF89360 17 110 1.06E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis PNUC_RS09765 35a9ef1a805eb42d82cdd74ea8debb6e 124 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 124 36.522 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 PNUC_RS09765 35a9ef1a805eb42d82cdd74ea8debb6e 124 PANTHER PTHR10072 19 123 2.8E-49 T 22-04-2016 PNUC_RS07615 0417c4152ba66e8bf7b0784f5cbc24f4 352 SMART SM00771 213 328 0.0034 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PNUC_RS07615 0417c4152ba66e8bf7b0784f5cbc24f4 352 SUPERFAMILY SSF64383 213 335 5.49E-16 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PNUC_RS07615 0417c4152ba66e8bf7b0784f5cbc24f4 352 Gene3D G3DSA:3.30.1400.10 213 334 1.4E-8 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PNUC_RS07615 0417c4152ba66e8bf7b0784f5cbc24f4 352 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 268 326 3.9E-6 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PNUC_RS07615 0417c4152ba66e8bf7b0784f5cbc24f4 352 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 240 328 1.0E-5 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 Pfam PF13361 UvrD-like helicase C-terminal domain 292 640 1.4E-72 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 PANTHER PTHR11070 553 667 2.0E-199 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 PANTHER PTHR11070 1 522 2.0E-199 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 PANTHER PTHR11070:SF7 553 667 2.0E-199 T 22-04-2016 PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 PANTHER PTHR11070:SF7 1 522 2.0E-199 T 22-04-2016 PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 287 6.7E-69 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 SUPERFAMILY SSF52540 3 664 1.63E-170 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 Gene3D G3DSA:1.10.486.10 403 565 6.0E-45 T 22-04-2016 PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 Gene3D G3DSA:3.40.50.300 576 667 3.8E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 Gene3D G3DSA:3.40.50.300 301 402 3.8E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 Gene3D G3DSA:3.40.50.300 194 300 1.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 Gene3D G3DSA:3.40.50.300 4 117 1.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08920 451962977d0d6d00b804ce4a5e970827 787 Gene3D G3DSA:1.10.10.160 120 192 5.1E-18 T 22-04-2016 IPR013986 DExx box DNA helicase domain PNUC_RS07675 eedea16954d3289e3f8f6ab9eb529a20 232 SMART SM00382 38 226 1.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS07675 eedea16954d3289e3f8f6ab9eb529a20 232 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS07675 eedea16954d3289e3f8f6ab9eb529a20 232 SUPERFAMILY SSF52540 10 229 3.55E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07675 eedea16954d3289e3f8f6ab9eb529a20 232 PANTHER PTHR24220:SF111 11 228 9.8E-104 T 22-04-2016 PNUC_RS07675 eedea16954d3289e3f8f6ab9eb529a20 232 Pfam PF00005 ABC transporter 29 177 1.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS07675 eedea16954d3289e3f8f6ab9eb529a20 232 PANTHER PTHR24220 11 228 9.8E-104 T 22-04-2016 PNUC_RS07675 eedea16954d3289e3f8f6ab9eb529a20 232 Gene3D G3DSA:3.40.50.300 9 228 9.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00140 7cd08eeb1a5250fa07305d6db6fc2b55 371 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 365 45.388 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS00140 7cd08eeb1a5250fa07305d6db6fc2b55 371 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 361 4.1E-111 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS00140 7cd08eeb1a5250fa07305d6db6fc2b55 371 PANTHER PTHR21091 6 369 6.2E-119 T 22-04-2016 PNUC_RS00140 7cd08eeb1a5250fa07305d6db6fc2b55 371 PANTHER PTHR21091:SF2 6 369 6.2E-119 T 22-04-2016 PNUC_RS00140 7cd08eeb1a5250fa07305d6db6fc2b55 371 Gene3D G3DSA:3.20.20.210 5 367 6.6E-129 T 22-04-2016 PNUC_RS00140 7cd08eeb1a5250fa07305d6db6fc2b55 371 SUPERFAMILY SSF51726 3 366 1.53E-97 T 22-04-2016 PNUC_RS00140 7cd08eeb1a5250fa07305d6db6fc2b55 371 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 363 2.5E-122 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS00140 7cd08eeb1a5250fa07305d6db6fc2b55 371 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS00140 7cd08eeb1a5250fa07305d6db6fc2b55 371 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 145 161 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03900 45a49af0eeab5e6d220b4f573f81b09f 208 PANTHER PTHR13887 8 191 6.3E-17 T 22-04-2016 PNUC_RS03900 45a49af0eeab5e6d220b4f573f81b09f 208 SUPERFAMILY SSF52833 7 188 2.01E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS03900 45a49af0eeab5e6d220b4f573f81b09f 208 Pfam PF01323 DSBA-like thioredoxin domain 9 186 3.9E-18 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 PNUC_RS03900 45a49af0eeab5e6d220b4f573f81b09f 208 Gene3D G3DSA:3.40.30.10 4 189 2.2E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS00565 f17cea65b290cd7537be3c3ff35168f0 250 PANTHER PTHR24220:SF305 6 224 4.9E-101 T 22-04-2016 PNUC_RS00565 f17cea65b290cd7537be3c3ff35168f0 250 SUPERFAMILY SSF52540 4 226 1.88E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00565 f17cea65b290cd7537be3c3ff35168f0 250 Gene3D G3DSA:3.40.50.300 3 226 1.0E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00565 f17cea65b290cd7537be3c3ff35168f0 250 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS00565 f17cea65b290cd7537be3c3ff35168f0 250 SMART SM00382 29 209 1.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS00565 f17cea65b290cd7537be3c3ff35168f0 250 Pfam PF00005 ABC transporter 20 162 6.8E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS00565 f17cea65b290cd7537be3c3ff35168f0 250 PANTHER PTHR24220 6 224 4.9E-101 T 22-04-2016 PNUC_RS00400 140297d7df26883f4e8d5ae80a76c929 172 SUPERFAMILY SSF54211 85 165 3.29E-25 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS00400 140297d7df26883f4e8d5ae80a76c929 172 SUPERFAMILY SSF54768 14 82 5.13E-21 T 22-04-2016 PNUC_RS00400 140297d7df26883f4e8d5ae80a76c929 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 169 33.761 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PNUC_RS00400 140297d7df26883f4e8d5ae80a76c929 172 PANTHER PTHR13718 15 170 1.1E-63 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00400 140297d7df26883f4e8d5ae80a76c929 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 92 163 5.4E-29 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 PNUC_RS00400 140297d7df26883f4e8d5ae80a76c929 172 Gene3D G3DSA:3.30.230.10 82 165 2.0E-31 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PNUC_RS00400 140297d7df26883f4e8d5ae80a76c929 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 169 7.4E-64 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PNUC_RS00400 140297d7df26883f4e8d5ae80a76c929 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site PNUC_RS00400 140297d7df26883f4e8d5ae80a76c929 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 80 1.8E-24 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 PNUC_RS00400 140297d7df26883f4e8d5ae80a76c929 172 Gene3D G3DSA:3.30.160.20 15 79 1.3E-25 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain PNUC_RS05205 09d52bead255aac38698da333b9c59c2 457 PANTHER PTHR30024:SF10 54 455 1.9E-105 T 22-04-2016 PNUC_RS05205 09d52bead255aac38698da333b9c59c2 457 Pfam PF13379 NMT1-like family 97 334 1.2E-77 T 22-04-2016 PNUC_RS05205 09d52bead255aac38698da333b9c59c2 457 Gene3D G3DSA:3.40.190.10 191 312 8.3E-14 T 22-04-2016 PNUC_RS05205 09d52bead255aac38698da333b9c59c2 457 SUPERFAMILY SSF53850 99 314 1.73E-36 T 22-04-2016 PNUC_RS05205 09d52bead255aac38698da333b9c59c2 457 PANTHER PTHR30024 54 455 1.9E-105 T 22-04-2016 PNUC_RS01940 aba29083e7c2cc050ea29ababd83fa76 529 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 286 485 1.9E-55 T 22-04-2016 IPR024719 HpaB/PvcC/4-BUDH C-terminal PNUC_RS01940 aba29083e7c2cc050ea29ababd83fa76 529 SUPERFAMILY SSF56645 8 276 1.83E-69 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PNUC_RS01940 aba29083e7c2cc050ea29ababd83fa76 529 PIRSF PIRSF000331 6 494 8.8E-108 T 22-04-2016 IPR004925 HpaB/PvcC/4-BUDH PNUC_RS01940 aba29083e7c2cc050ea29ababd83fa76 529 Gene3D G3DSA:1.20.140.10 269 485 2.7E-69 T 22-04-2016 PNUC_RS01940 aba29083e7c2cc050ea29ababd83fa76 529 SUPERFAMILY SSF47203 267 486 6.7E-58 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PNUC_RS01940 aba29083e7c2cc050ea29ababd83fa76 529 Gene3D G3DSA:1.10.3140.10 8 147 3.7E-31 T 22-04-2016 PNUC_RS01940 aba29083e7c2cc050ea29ababd83fa76 529 PANTHER PTHR36117:SF2 13 485 1.9E-97 T 22-04-2016 PNUC_RS01940 aba29083e7c2cc050ea29ababd83fa76 529 PANTHER PTHR36117 13 485 1.9E-97 T 22-04-2016 PNUC_RS01940 aba29083e7c2cc050ea29ababd83fa76 529 Gene3D G3DSA:2.40.110.10 149 268 1.4E-45 T 22-04-2016 PNUC_RS01940 aba29083e7c2cc050ea29ababd83fa76 529 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 12 275 4.0E-85 T 22-04-2016 IPR024674 HpaB/PvcC/4-BUDH N-terminal PNUC_RS07395 0d7dba4e7aca23e9afb7a1a7be6083f7 263 SMART SM00014 75 194 2.4E-10 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PNUC_RS07395 0d7dba4e7aca23e9afb7a1a7be6083f7 263 SUPERFAMILY SSF48317 11 196 1.44E-31 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PNUC_RS07395 0d7dba4e7aca23e9afb7a1a7be6083f7 263 Gene3D G3DSA:1.20.144.10 32 195 3.6E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PNUC_RS07395 0d7dba4e7aca23e9afb7a1a7be6083f7 263 Pfam PF01569 PAP2 superfamily 76 188 3.2E-21 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PNUC_RS07395 0d7dba4e7aca23e9afb7a1a7be6083f7 263 PANTHER PTHR14969 34 188 2.6E-21 T 22-04-2016 PNUC_RS09930 ff00d4315ff213d7d1897a173664bcd3 381 SMART SM00478 42 195 1.3E-50 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PNUC_RS09930 ff00d4315ff213d7d1897a173664bcd3 381 SUPERFAMILY SSF55811 316 369 7.24E-16 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS09930 ff00d4315ff213d7d1897a173664bcd3 381 SUPERFAMILY SSF55811 229 276 7.24E-16 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS09930 ff00d4315ff213d7d1897a173664bcd3 381 Gene3D G3DSA:1.10.340.30 25 125 3.4E-43 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PNUC_RS09930 ff00d4315ff213d7d1897a173664bcd3 381 Gene3D G3DSA:1.10.1670.10 126 231 1.6E-33 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PNUC_RS09930 ff00d4315ff213d7d1897a173664bcd3 381 PANTHER PTHR10359 6 350 4.1E-81 T 22-04-2016 PNUC_RS09930 ff00d4315ff213d7d1897a173664bcd3 381 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 9 273 1.1E-95 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 PNUC_RS09930 ff00d4315ff213d7d1897a173664bcd3 381 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 170 7.9E-21 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PNUC_RS09930 ff00d4315ff213d7d1897a173664bcd3 381 SUPERFAMILY SSF48150 6 231 6.75E-68 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PNUC_RS09930 ff00d4315ff213d7d1897a173664bcd3 381 Gene3D G3DSA:3.90.79.10 244 371 3.1E-14 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS09930 ff00d4315ff213d7d1897a173664bcd3 381 PANTHER PTHR10359:SF1 6 350 4.1E-81 T 22-04-2016 PNUC_RS09930 ff00d4315ff213d7d1897a173664bcd3 381 Pfam PF14815 NUDIX domain 244 369 1.3E-18 T 22-04-2016 IPR029119 MutY, C-terminal PNUC_RS10745 2fd5f0c1d1cfd93a54b02d1cf85c71f7 227 Gene3D G3DSA:3.40.50.2300 1 123 2.0E-34 T 22-04-2016 PNUC_RS10745 2fd5f0c1d1cfd93a54b02d1cf85c71f7 227 SMART SM00448 2 114 3.7E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS10745 2fd5f0c1d1cfd93a54b02d1cf85c71f7 227 Gene3D G3DSA:1.10.10.60 152 219 1.7E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS10745 2fd5f0c1d1cfd93a54b02d1cf85c71f7 227 PANTHER PTHR32071 4 118 1.9E-38 T 22-04-2016 PNUC_RS10745 2fd5f0c1d1cfd93a54b02d1cf85c71f7 227 Pfam PF00072 Response regulator receiver domain 4 114 1.2E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS10745 2fd5f0c1d1cfd93a54b02d1cf85c71f7 227 SUPERFAMILY SSF46689 154 219 8.96E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS10745 2fd5f0c1d1cfd93a54b02d1cf85c71f7 227 SUPERFAMILY SSF52172 1 124 9.68E-37 T 22-04-2016 IPR011006 CheY-like superfamily PNUC_RS10745 2fd5f0c1d1cfd93a54b02d1cf85c71f7 227 PANTHER PTHR32071:SF17 4 118 1.9E-38 T 22-04-2016 PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 PANTHER PTHR24960 1 396 1.4E-127 T 22-04-2016 PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 Pfam PF13746 4Fe-4S dicluster domain 216 321 1.3E-43 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 Gene3D G3DSA:2.60.40.10 357 485 5.0E-29 T 22-04-2016 IPR013783 Immunoglobulin-like fold PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 269 280 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 Gene3D G3DSA:1.10.1060.10 300 332 2.3E-4 T 22-04-2016 PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 Gene3D G3DSA:3.30.70.20 278 299 3.8E-5 T 22-04-2016 PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 357 484 3.1E-23 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 Gene3D G3DSA:3.30.70.20 220 277 3.0E-7 T 22-04-2016 PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 Pfam PF12801 4Fe-4S binding domain 91 132 8.7E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 36 473 6.4E-148 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 PANTHER PTHR24960:SF45 1 396 1.4E-127 T 22-04-2016 PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 SUPERFAMILY SSF54862 170 366 3.35E-31 T 22-04-2016 PNUC_RS02395 cf0733e99d7f09841534c533d91385de 485 SUPERFAMILY SSF54862 100 122 3.35E-31 T 22-04-2016 PNUC_RS06810 ccb56ecc2be131987bb0992fcf9c5398 261 Pfam PF01975 Survival protein SurE 7 195 6.9E-55 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PNUC_RS06810 ccb56ecc2be131987bb0992fcf9c5398 261 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 6 245 2.8E-63 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PNUC_RS06810 ccb56ecc2be131987bb0992fcf9c5398 261 Gene3D G3DSA:3.40.1210.10 6 254 2.8E-82 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PNUC_RS06810 ccb56ecc2be131987bb0992fcf9c5398 261 SUPERFAMILY SSF64167 6 254 1.83E-78 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PNUC_RS06810 ccb56ecc2be131987bb0992fcf9c5398 261 PANTHER PTHR30457 1 260 1.1E-81 T 22-04-2016 PNUC_RS06810 ccb56ecc2be131987bb0992fcf9c5398 261 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 5 261 36.867 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PNUC_RS09245 b86a1479bb7888aa42cf723cf1ab21c3 189 PANTHER PTHR12213 4 189 1.3E-71 T 22-04-2016 PNUC_RS09245 b86a1479bb7888aa42cf723cf1ab21c3 189 PANTHER PTHR12213:SF0 4 189 1.3E-71 T 22-04-2016 PNUC_RS09245 b86a1479bb7888aa42cf723cf1ab21c3 189 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 182 1.1E-59 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PNUC_RS09245 b86a1479bb7888aa42cf723cf1ab21c3 189 Pfam PF01923 Cobalamin adenosyltransferase 8 169 1.3E-56 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PNUC_RS09245 b86a1479bb7888aa42cf723cf1ab21c3 189 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 182 4.0E-62 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PNUC_RS09245 b86a1479bb7888aa42cf723cf1ab21c3 189 Gene3D G3DSA:1.20.1200.10 17 185 6.2E-64 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PNUC_RS09245 b86a1479bb7888aa42cf723cf1ab21c3 189 SUPERFAMILY SSF89028 7 182 8.83E-60 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PNUC_RS08995 240c7883ac1505d9a7fddcad5915df9a 393 PANTHER PTHR30483 9 393 9.5E-87 T 22-04-2016 PNUC_RS08995 240c7883ac1505d9a7fddcad5915df9a 393 SUPERFAMILY SSF53822 41 386 1.01E-94 T 22-04-2016 IPR028082 Periplasmic binding protein-like I PNUC_RS08995 240c7883ac1505d9a7fddcad5915df9a 393 Gene3D G3DSA:3.40.50.2300 41 242 1.5E-68 T 22-04-2016 PNUC_RS08995 240c7883ac1505d9a7fddcad5915df9a 393 PANTHER PTHR30483:SF20 9 393 9.5E-87 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PNUC_RS08995 240c7883ac1505d9a7fddcad5915df9a 393 Pfam PF13458 Periplasmic binding protein 41 366 1.5E-60 T 22-04-2016 IPR028081 Leucine-binding protein domain PNUC_RS02255 66090721eec129a959390f04d91d9bff 155 SUPERFAMILY SSF52833 4 153 1.51E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS02255 66090721eec129a959390f04d91d9bff 155 PIRSF PIRSF000239 1 154 7.3E-25 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PNUC_RS02255 66090721eec129a959390f04d91d9bff 155 PANTHER PTHR10681 3 153 3.0E-32 T 22-04-2016 PNUC_RS02255 66090721eec129a959390f04d91d9bff 155 Pfam PF00578 AhpC/TSA family 5 132 4.3E-27 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PNUC_RS02255 66090721eec129a959390f04d91d9bff 155 Gene3D G3DSA:3.40.30.10 2 142 2.5E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS10205 6e1524980f139a2258b72bd1e12c3b93 193 PIRSF PIRSF000303 6 192 1.0E-61 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PNUC_RS10205 6e1524980f139a2258b72bd1e12c3b93 193 ProSitePatterns PS00460 Glutathione peroxidases active site. 56 71 - T 22-04-2016 IPR029759 Glutathione peroxidase active site PNUC_RS10205 6e1524980f139a2258b72bd1e12c3b93 193 PANTHER PTHR11592 9 193 3.5E-70 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PNUC_RS10205 6e1524980f139a2258b72bd1e12c3b93 193 Gene3D G3DSA:3.40.30.10 39 189 1.6E-56 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS10205 6e1524980f139a2258b72bd1e12c3b93 193 SUPERFAMILY SSF52833 35 188 3.02E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS10205 6e1524980f139a2258b72bd1e12c3b93 193 PRINTS PR01011 Glutathione peroxidase family signature 150 159 1.0E-16 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PNUC_RS10205 6e1524980f139a2258b72bd1e12c3b93 193 PRINTS PR01011 Glutathione peroxidase family signature 89 105 1.0E-16 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PNUC_RS10205 6e1524980f139a2258b72bd1e12c3b93 193 PRINTS PR01011 Glutathione peroxidase family signature 54 71 1.0E-16 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PNUC_RS10205 6e1524980f139a2258b72bd1e12c3b93 193 Pfam PF00255 Glutathione peroxidase 45 142 1.7E-34 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PNUC_RS09170 e5d24b931430e78d962f9117031d837e 467 Pfam PF12626 Polymerase A arginine-rich C-terminus 334 455 3.1E-40 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain PNUC_RS09170 e5d24b931430e78d962f9117031d837e 467 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 24 458 35.501 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 PNUC_RS09170 e5d24b931430e78d962f9117031d837e 467 Pfam PF01743 Poly A polymerase head domain 60 190 1.4E-33 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 PNUC_RS09170 e5d24b931430e78d962f9117031d837e 467 SUPERFAMILY SSF81301 35 187 4.9E-38 T 22-04-2016 PNUC_RS09170 e5d24b931430e78d962f9117031d837e 467 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 30 459 2.6E-150 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 PNUC_RS09170 e5d24b931430e78d962f9117031d837e 467 Gene3D G3DSA:1.10.3090.10 190 422 4.6E-43 T 22-04-2016 PNUC_RS09170 e5d24b931430e78d962f9117031d837e 467 SUPERFAMILY SSF81891 188 425 1.28E-46 T 22-04-2016 PNUC_RS09170 e5d24b931430e78d962f9117031d837e 467 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 217 278 7.6E-18 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PNUC_RS09170 e5d24b931430e78d962f9117031d837e 467 Gene3D G3DSA:3.30.460.10 42 189 3.0E-48 T 22-04-2016 PNUC_RS09170 e5d24b931430e78d962f9117031d837e 467 PANTHER PTHR13734:SF47 19 280 1.2E-97 T 22-04-2016 PNUC_RS09170 e5d24b931430e78d962f9117031d837e 467 PANTHER PTHR13734 19 280 1.2E-97 T 22-04-2016 PNUC_RS03620 86a88c523fc8461841832523c7bcdc90 81 SUPERFAMILY SSF89447 1 60 3.49E-14 T 22-04-2016 PNUC_RS03620 86a88c523fc8461841832523c7bcdc90 81 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 51 3.6E-12 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 PNUC_RS03620 86a88c523fc8461841832523c7bcdc90 81 SMART SM00966 6 52 6.5E-10 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 PNUC_RS03620 86a88c523fc8461841832523c7bcdc90 81 Gene3D G3DSA:2.10.260.10 1 47 2.9E-19 T 22-04-2016 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 Gene3D G3DSA:1.10.10.10 233 297 7.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 PRINTS PR00046 Major sigma-70 factor signature 87 100 6.4E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 PRINTS PR00046 Major sigma-70 factor signature 111 119 6.4E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 PRINTS PR00046 Major sigma-70 factor signature 264 279 6.4E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 PRINTS PR00046 Major sigma-70 factor signature 279 290 6.4E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 Pfam PF04542 Sigma-70 region 2 63 132 2.9E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 Gene3D G3DSA:1.10.601.10 26 132 4.7E-37 T 22-04-2016 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 24 295 5.1E-115 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 Pfam PF04545 Sigma-70, region 4 236 291 1.9E-13 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 SUPERFAMILY SSF88659 197 296 3.92E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 9 296 51.633 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 87 100 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 264 290 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 SUPERFAMILY SSF88946 25 132 1.44E-38 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 58 292 9.7E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS10000 218f15beab7b2b182687d833f5ce59b0 299 PANTHER PTHR30376 12 291 5.5E-95 T 22-04-2016 PNUC_RS07825 256b4e250346eaf146713fd87b65b5d3 429 Gene3D G3DSA:3.40.50.1820 106 412 1.0E-11 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS07825 256b4e250346eaf146713fd87b65b5d3 429 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 411 1.5E-177 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase PNUC_RS07825 256b4e250346eaf146713fd87b65b5d3 429 PIRSF PIRSF020818 1 423 3.1E-191 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase PNUC_RS07825 256b4e250346eaf146713fd87b65b5d3 429 Pfam PF06850 PHB de-polymerase C-terminus 211 412 8.5E-93 T 22-04-2016 IPR009656 PHB de-polymerase, C-terminal PNUC_RS07825 256b4e250346eaf146713fd87b65b5d3 429 SUPERFAMILY SSF53474 107 410 2.1E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS01670 c6c9638d25b7c93452470dabe8e8ac79 277 PANTHER PTHR30413 18 277 7.0E-56 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS01670 c6c9638d25b7c93452470dabe8e8ac79 277 Pfam PF01061 ABC-2 type transporter 25 238 5.5E-29 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 PNUC_RS01670 c6c9638d25b7c93452470dabe8e8ac79 277 PANTHER PTHR30413:SF8 18 277 7.0E-56 T 22-04-2016 PNUC_RS01670 c6c9638d25b7c93452470dabe8e8ac79 277 PRINTS PR00164 ABC-2 type transport system membrane protein signature 45 66 1.5E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS01670 c6c9638d25b7c93452470dabe8e8ac79 277 PRINTS PR00164 ABC-2 type transport system membrane protein signature 215 234 1.5E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS01670 c6c9638d25b7c93452470dabe8e8ac79 277 PRINTS PR00164 ABC-2 type transport system membrane protein signature 195 214 1.5E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS01670 c6c9638d25b7c93452470dabe8e8ac79 277 PRINTS PR00164 ABC-2 type transport system membrane protein signature 158 182 1.5E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS01670 c6c9638d25b7c93452470dabe8e8ac79 277 PIRSF PIRSF006648 1 272 5.9E-15 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS06300 8ee58a8f976bc4e3507a364fc97091c6 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 243 264 3.0E-8 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PNUC_RS06300 8ee58a8f976bc4e3507a364fc97091c6 265 Pfam PF00005 ABC transporter 34 192 8.8E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS06300 8ee58a8f976bc4e3507a364fc97091c6 265 Gene3D G3DSA:3.40.50.300 15 260 1.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06300 8ee58a8f976bc4e3507a364fc97091c6 265 PANTHER PTHR24220:SF366 19 265 1.1E-108 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD PNUC_RS06300 8ee58a8f976bc4e3507a364fc97091c6 265 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 17 265 1.0E-105 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD PNUC_RS06300 8ee58a8f976bc4e3507a364fc97091c6 265 PANTHER PTHR24220 19 265 1.1E-108 T 22-04-2016 PNUC_RS06300 8ee58a8f976bc4e3507a364fc97091c6 265 SUPERFAMILY SSF52540 17 263 2.17E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06300 8ee58a8f976bc4e3507a364fc97091c6 265 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS00735 474ea06c5bfca1fba64421ef130cfa83 283 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 21 279 1.3E-78 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PNUC_RS00735 474ea06c5bfca1fba64421ef130cfa83 283 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 283 38.219 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PNUC_RS00735 474ea06c5bfca1fba64421ef130cfa83 283 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 188 194 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PNUC_RS00735 474ea06c5bfca1fba64421ef130cfa83 283 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 17 282 6.8E-70 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PNUC_RS00735 474ea06c5bfca1fba64421ef130cfa83 283 PANTHER PTHR18895 20 283 3.2E-78 T 22-04-2016 PNUC_RS00735 474ea06c5bfca1fba64421ef130cfa83 283 Gene3D G3DSA:1.10.8.10 10 85 6.8E-15 T 22-04-2016 PNUC_RS00735 474ea06c5bfca1fba64421ef130cfa83 283 PANTHER PTHR18895:SF64 20 283 3.2E-78 T 22-04-2016 PNUC_RS00735 474ea06c5bfca1fba64421ef130cfa83 283 Gene3D G3DSA:3.40.50.150 86 282 3.1E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS00735 474ea06c5bfca1fba64421ef130cfa83 283 SUPERFAMILY SSF53335 9 280 4.78E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS00735 474ea06c5bfca1fba64421ef130cfa83 283 Pfam PF05175 Methyltransferase small domain 100 199 1.1E-15 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 PNUC_RS09205 a335ebbdf364d03bd6e3664195194c70 336 PIRSF PIRSF005485 1 336 1.7E-101 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 PNUC_RS09205 a335ebbdf364d03bd6e3664195194c70 336 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 331 3.3E-89 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 PNUC_RS09205 a335ebbdf364d03bd6e3664195194c70 336 PANTHER PTHR34824 1 336 3.3E-92 T 22-04-2016 PNUC_RS09205 a335ebbdf364d03bd6e3664195194c70 336 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 6 72 1.6E-5 T 22-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 PNUC_RS09205 a335ebbdf364d03bd6e3664195194c70 336 Gene3D G3DSA:1.10.10.10 1 83 2.4E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS09205 a335ebbdf364d03bd6e3664195194c70 336 SUPERFAMILY SSF46785 1 83 3.75E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS09205 a335ebbdf364d03bd6e3664195194c70 336 SUPERFAMILY SSF55781 70 335 1.43E-58 T 22-04-2016 IPR029016 GAF domain-like PNUC_RS09205 a335ebbdf364d03bd6e3664195194c70 336 Pfam PF01628 HrcA protein C terminal domain 102 320 3.6E-56 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 PNUC_RS09205 a335ebbdf364d03bd6e3664195194c70 336 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 327 26.15 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 PNUC_RS09205 a335ebbdf364d03bd6e3664195194c70 336 Gene3D G3DSA:3.30.450.40 174 335 8.3E-36 T 22-04-2016 IPR029016 GAF domain-like PNUC_RS05550 7a179b9ca533cf5c393d91db968ce01a 595 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 29 589 1.7E-253 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS05550 7a179b9ca533cf5c393d91db968ce01a 595 PANTHER PTHR18968 9 590 0.0 T 22-04-2016 PNUC_RS05550 7a179b9ca533cf5c393d91db968ce01a 595 Gene3D G3DSA:3.40.50.970 382 583 3.2E-77 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS05550 7a179b9ca533cf5c393d91db968ce01a 595 Gene3D G3DSA:3.40.50.970 29 201 4.8E-71 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS05550 7a179b9ca533cf5c393d91db968ce01a 595 Gene3D G3DSA:3.40.50.1220 213 381 4.1E-65 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PNUC_RS05550 7a179b9ca533cf5c393d91db968ce01a 595 SUPERFAMILY SSF52518 27 208 2.13E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS05550 7a179b9ca533cf5c393d91db968ce01a 595 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 31 194 6.2E-57 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PNUC_RS05550 7a179b9ca533cf5c393d91db968ce01a 595 PANTHER PTHR18968:SF116 9 590 0.0 T 22-04-2016 PNUC_RS05550 7a179b9ca533cf5c393d91db968ce01a 595 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 566 6.0E-50 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PNUC_RS05550 7a179b9ca533cf5c393d91db968ce01a 595 SUPERFAMILY SSF52518 397 590 1.18E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS05550 7a179b9ca533cf5c393d91db968ce01a 595 SUPERFAMILY SSF52467 212 386 4.61E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PNUC_RS05550 7a179b9ca533cf5c393d91db968ce01a 595 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 219 353 1.3E-44 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 Gene3D G3DSA:3.40.250.10 262 351 1.6E-11 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 SUPERFAMILY SSF52821 14 120 1.17E-19 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 SUPERFAMILY SSF52821 256 351 1.83E-17 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 PANTHER PTHR12231 20 29 3.0E-40 T 22-04-2016 PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 PANTHER PTHR12231 253 351 3.0E-40 T 22-04-2016 PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 Pfam PF00581 Rhodanese-like domain 390 469 2.2E-4 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 Pfam PF00581 Rhodanese-like domain 14 101 1.4E-5 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 Pfam PF00581 Rhodanese-like domain 130 224 3.2E-9 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 SMART SM00450 379 473 7.8E-5 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 SMART SM00450 7 104 2.0E-7 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 SMART SM00450 130 228 3.7E-6 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 SMART SM00450 266 363 0.015 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 SUPERFAMILY SSF52821 372 524 1.44E-26 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 SUPERFAMILY SSF52821 106 233 2.36E-29 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 Gene3D G3DSA:3.40.250.10 14 112 2.5E-16 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 Gene3D G3DSA:3.40.250.10 119 236 1.9E-19 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 Gene3D G3DSA:3.40.250.10 366 478 5.1E-19 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 PANTHER PTHR12231:SF83 20 29 3.0E-40 T 22-04-2016 PNUC_RS07075 abb444f304bfc90a5c1494628271ad64 528 PANTHER PTHR12231:SF83 253 351 3.0E-40 T 22-04-2016 PNUC_RS10295 c4a55cbecd235e82bb17632058301562 379 PANTHER PTHR30469:SF11 1 374 2.8E-111 T 22-04-2016 PNUC_RS10295 c4a55cbecd235e82bb17632058301562 379 PANTHER PTHR30469 1 374 2.8E-111 T 22-04-2016 PNUC_RS10295 c4a55cbecd235e82bb17632058301562 379 Pfam PF00529 HlyD membrane-fusion protein of T1SS 84 348 1.3E-6 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PNUC_RS10295 c4a55cbecd235e82bb17632058301562 379 Gene3D G3DSA:2.40.50.100 73 105 3.3E-13 T 22-04-2016 PNUC_RS10295 c4a55cbecd235e82bb17632058301562 379 Gene3D G3DSA:2.40.50.100 166 197 3.3E-13 T 22-04-2016 PNUC_RS10295 c4a55cbecd235e82bb17632058301562 379 SUPERFAMILY SSF111369 63 279 4.97E-44 T 22-04-2016 PNUC_RS10295 c4a55cbecd235e82bb17632058301562 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 360 3.1E-65 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PNUC_RS10295 c4a55cbecd235e82bb17632058301562 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 272 4.5E-32 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PNUC_RS01295 694b155f6edac43c086fe950fe71ac61 138 Pfam PF03652 Holliday junction resolvase 6 129 2.1E-31 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PNUC_RS01295 694b155f6edac43c086fe950fe71ac61 138 SMART SM00732 5 105 6.5E-24 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PNUC_RS01295 694b155f6edac43c086fe950fe71ac61 138 PANTHER PTHR33317 5 128 1.9E-23 T 22-04-2016 PNUC_RS01295 694b155f6edac43c086fe950fe71ac61 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 5 132 19.678 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PNUC_RS01295 694b155f6edac43c086fe950fe71ac61 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 8 128 1.5E-23 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PNUC_RS01295 694b155f6edac43c086fe950fe71ac61 138 Gene3D G3DSA:3.30.420.140 6 135 1.1E-34 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PNUC_RS01295 694b155f6edac43c086fe950fe71ac61 138 SUPERFAMILY SSF53098 6 130 1.06E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS00135 c70f35e87ae7ff1ec24671afd0e38ae0 138 SUPERFAMILY SSF51344 3 85 2.35E-25 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00135 c70f35e87ae7ff1ec24671afd0e38ae0 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 21.0 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00135 c70f35e87ae7ff1ec24671afd0e38ae0 138 Gene3D G3DSA:1.20.5.440 90 131 3.2E-13 T 22-04-2016 PNUC_RS00135 c70f35e87ae7ff1ec24671afd0e38ae0 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 8.0E-33 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00135 c70f35e87ae7ff1ec24671afd0e38ae0 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 1.3E-42 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00135 c70f35e87ae7ff1ec24671afd0e38ae0 138 PANTHER PTHR13822 1 136 1.6E-43 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00135 c70f35e87ae7ff1ec24671afd0e38ae0 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 3.2E-8 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain PNUC_RS00135 c70f35e87ae7ff1ec24671afd0e38ae0 138 SUPERFAMILY SSF46604 87 135 2.46E-12 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain PNUC_RS00135 c70f35e87ae7ff1ec24671afd0e38ae0 138 Gene3D G3DSA:2.60.15.10 1 88 5.9E-32 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00135 c70f35e87ae7ff1ec24671afd0e38ae0 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 1.4E-30 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 PNUC_RS00460 7b0b8ee517f76707922a0d1db7970861 558 SUPERFAMILY SSF74863 24 143 1.96E-25 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PNUC_RS00460 7b0b8ee517f76707922a0d1db7970861 558 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 203 405 2.6E-19 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PNUC_RS00460 7b0b8ee517f76707922a0d1db7970861 558 Pfam PF11412 Disulphide bond corrector protein DsbC 25 143 1.3E-26 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PNUC_RS00460 7b0b8ee517f76707922a0d1db7970861 558 PANTHER PTHR32234:SF0 25 173 2.1E-110 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PNUC_RS00460 7b0b8ee517f76707922a0d1db7970861 558 PANTHER PTHR32234:SF0 190 558 2.1E-110 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PNUC_RS00460 7b0b8ee517f76707922a0d1db7970861 558 Pfam PF13899 Thioredoxin-like 448 527 5.8E-12 T 22-04-2016 PNUC_RS00460 7b0b8ee517f76707922a0d1db7970861 558 SUPERFAMILY SSF52833 449 556 6.96E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS00460 7b0b8ee517f76707922a0d1db7970861 558 PANTHER PTHR32234 25 173 2.1E-110 T 22-04-2016 PNUC_RS00460 7b0b8ee517f76707922a0d1db7970861 558 PANTHER PTHR32234 190 558 2.1E-110 T 22-04-2016 PNUC_RS00460 7b0b8ee517f76707922a0d1db7970861 558 Gene3D G3DSA:2.60.40.1250 22 146 7.8E-30 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PNUC_RS00460 7b0b8ee517f76707922a0d1db7970861 558 Gene3D G3DSA:3.40.30.10 448 557 2.8E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS03110 a22beb3d33a8e88e38e1e30b9c2a3df5 448 Gene3D G3DSA:3.40.630.40 361 437 4.2E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PNUC_RS03110 a22beb3d33a8e88e38e1e30b9c2a3df5 448 Gene3D G3DSA:3.40.630.40 216 313 4.2E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PNUC_RS03110 a22beb3d33a8e88e38e1e30b9c2a3df5 448 Pfam PF11741 AMIN domain 41 144 1.4E-27 T 22-04-2016 IPR021731 AMIN domain PNUC_RS03110 a22beb3d33a8e88e38e1e30b9c2a3df5 448 SMART SM00646 278 433 2.8E-61 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PNUC_RS03110 a22beb3d33a8e88e38e1e30b9c2a3df5 448 PANTHER PTHR30404 41 178 1.8E-99 T 22-04-2016 PNUC_RS03110 a22beb3d33a8e88e38e1e30b9c2a3df5 448 PANTHER PTHR30404 205 441 1.8E-99 T 22-04-2016 PNUC_RS03110 a22beb3d33a8e88e38e1e30b9c2a3df5 448 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 218 433 1.0E-48 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PNUC_RS03110 a22beb3d33a8e88e38e1e30b9c2a3df5 448 SUPERFAMILY SSF53187 360 436 4.08E-54 T 22-04-2016 PNUC_RS03110 a22beb3d33a8e88e38e1e30b9c2a3df5 448 SUPERFAMILY SSF53187 216 312 4.08E-54 T 22-04-2016 PNUC_RS03110 a22beb3d33a8e88e38e1e30b9c2a3df5 448 PANTHER PTHR30404:SF0 41 178 1.8E-99 T 22-04-2016 PNUC_RS03110 a22beb3d33a8e88e38e1e30b9c2a3df5 448 PANTHER PTHR30404:SF0 205 441 1.8E-99 T 22-04-2016 PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 SUPERFAMILY SSF52518 123 549 1.6E-83 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 SMART SM00861 597 794 2.8E-62 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 Gene3D G3DSA:3.40.50.970 164 522 5.1E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 Gene3D G3DSA:3.40.50.970 601 805 2.2E-23 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 SUPERFAMILY SSF52518 581 801 5.3E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 Pfam PF00676 Dehydrogenase E1 component 217 523 3.2E-42 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 Pfam PF02779 Transketolase, pyrimidine binding domain 597 794 5.4E-66 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 PANTHER PTHR23152 1 950 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 799 941 3.2E-53 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 11 940 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 PANTHER PTHR23152:SF4 1 950 0.0 T 22-04-2016 PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 9 46 6.0E-17 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PNUC_RS04375 b04a8df8f0cad8ec1737d7135aa9ab2d 951 PIRSF PIRSF000157 1 943 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PNUC_RS02650 7fd7f712629371345938d3027d735cac 303 Gene3D G3DSA:3.40.50.1100 5 48 1.0E-78 T 22-04-2016 PNUC_RS02650 7fd7f712629371345938d3027d735cac 303 Gene3D G3DSA:3.40.50.1100 155 302 1.0E-78 T 22-04-2016 PNUC_RS02650 7fd7f712629371345938d3027d735cac 303 PANTHER PTHR10314:SF100 5 301 9.4E-157 T 22-04-2016 PNUC_RS02650 7fd7f712629371345938d3027d735cac 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 290 5.6E-65 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PNUC_RS02650 7fd7f712629371345938d3027d735cac 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 39 57 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PNUC_RS02650 7fd7f712629371345938d3027d735cac 303 SUPERFAMILY SSF53686 8 298 4.19E-89 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PNUC_RS02650 7fd7f712629371345938d3027d735cac 303 Gene3D G3DSA:3.40.50.1100 49 148 1.1E-36 T 22-04-2016 PNUC_RS02650 7fd7f712629371345938d3027d735cac 303 PANTHER PTHR10314 5 301 9.4E-157 T 22-04-2016 PNUC_RS02650 7fd7f712629371345938d3027d735cac 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 8 301 2.1E-137 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 PNUC_RS02650 7fd7f712629371345938d3027d735cac 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 301 3.2E-116 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 Gene3D G3DSA:3.30.300.20 207 306 4.1E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 Pfam PF07650 KH domain 223 298 4.2E-17 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 PANTHER PTHR11649:SF3 3 140 5.4E-91 T 22-04-2016 PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 SUPERFAMILY SSF54814 197 310 7.85E-38 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 PANTHER PTHR11649:SF3 161 309 5.4E-91 T 22-04-2016 PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 PANTHER PTHR11649 3 140 5.4E-91 T 22-04-2016 PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 SUPERFAMILY SSF52540 6 220 1.07E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 PANTHER PTHR11649 161 309 5.4E-91 T 22-04-2016 PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 141 1.9E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 Hamap MF_00367 GTPase Era [era]. 2 310 33.127 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 TIGRFAM TIGR00436 era: GTP-binding protein Era 5 293 4.5E-74 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 Pfam PF01926 50S ribosome-binding GTPase 7 120 1.6E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS02130 31562803b460a16cb8f17eebaa9b5484 311 Gene3D G3DSA:3.40.50.300 5 206 6.4E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08400 bbf843d484074f8e043c5d48955103e3 421 PANTHER PTHR31082 11 411 3.1E-20 T 22-04-2016 PNUC_RS08400 bbf843d484074f8e043c5d48955103e3 421 Pfam PF12821 Threonine/Serine exporter, ThrE 273 409 7.1E-16 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE PNUC_RS08400 bbf843d484074f8e043c5d48955103e3 421 Pfam PF06738 Putative threonine/serine exporter 12 250 3.1E-43 T 22-04-2016 IPR010619 Putative threonine/serine exporter PNUC_RS03150 894ec4e0990633ce5a275f5e5b9f76f5 135 PANTHER PTHR34309 1 134 2.1E-40 T 22-04-2016 PNUC_RS03150 894ec4e0990633ce5a275f5e5b9f76f5 135 SUPERFAMILY SSF143744 4 134 6.8E-35 T 22-04-2016 PNUC_RS03150 894ec4e0990633ce5a275f5e5b9f76f5 135 PANTHER PTHR34309:SF4 1 134 2.1E-40 T 22-04-2016 PNUC_RS03150 894ec4e0990633ce5a275f5e5b9f76f5 135 Pfam PF03928 Haem-degrading 8 131 1.1E-28 T 22-04-2016 IPR005624 Haem-degrading PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 Gene3D G3DSA:2.60.34.10 391 532 1.3E-70 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 SUPERFAMILY SSF100920 385 541 7.85E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 640 36.487 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 Gene3D G3DSA:3.30.420.40 119 198 3.5E-62 T 22-04-2016 PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 Gene3D G3DSA:3.30.420.40 4 52 3.5E-62 T 22-04-2016 PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 PANTHER PTHR19375 2 644 0.0 T 22-04-2016 PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 604 1.1E-285 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 Gene3D G3DSA:3.90.640.10 231 316 2.2E-30 T 22-04-2016 PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 PRINTS PR00301 70kDa heat shock protein signature 470 486 6.0E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.0E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.0E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 PRINTS PR00301 70kDa heat shock protein signature 389 408 6.0E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 PRINTS PR00301 70kDa heat shock protein signature 138 158 6.0E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 PRINTS PR00301 70kDa heat shock protein signature 366 386 6.0E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 PRINTS PR00301 70kDa heat shock protein signature 199 209 6.0E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 PRINTS PR00301 70kDa heat shock protein signature 335 351 6.0E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.0E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 Pfam PF00012 Hsp70 protein 4 604 4.8E-259 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 Gene3D G3DSA:3.30.30.30 53 106 7.4E-25 T 22-04-2016 PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 PANTHER PTHR19375:SF173 2 644 0.0 T 22-04-2016 PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 Gene3D G3DSA:3.30.420.40 320 362 6.9E-32 T 22-04-2016 PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 Gene3D G3DSA:3.30.420.40 199 230 6.9E-32 T 22-04-2016 PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 SUPERFAMILY SSF53067 189 383 5.71E-67 T 22-04-2016 PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 SUPERFAMILY SSF53067 4 184 6.15E-65 T 22-04-2016 PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 SUPERFAMILY SSF100934 508 606 1.31E-20 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site PNUC_RS09190 9e2ec6316d922dfaa2ac201b4d174aba 644 Gene3D G3DSA:1.20.1270.10 533 603 7.4E-25 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PNUC_RS04205 e3c11a491173b36ee7c0ed519a02b91e 145 PANTHER PTHR37691:SF1 5 145 5.4E-18 T 22-04-2016 PNUC_RS04205 e3c11a491173b36ee7c0ed519a02b91e 145 Pfam PF02635 DsrE/DsrF-like family 54 145 3.6E-12 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein PNUC_RS04205 e3c11a491173b36ee7c0ed519a02b91e 145 Gene3D G3DSA:3.40.1260.10 29 145 1.6E-30 T 22-04-2016 IPR027396 DsrEFH-like PNUC_RS04205 e3c11a491173b36ee7c0ed519a02b91e 145 PANTHER PTHR37691 5 145 5.4E-18 T 22-04-2016 PNUC_RS04205 e3c11a491173b36ee7c0ed519a02b91e 145 SUPERFAMILY SSF75169 30 145 1.04E-20 T 22-04-2016 IPR027396 DsrEFH-like PNUC_RS05055 529378b38a85d2ef459939a04e0416bd 336 Gene3D G3DSA:3.30.70.1400 25 125 5.3E-17 T 22-04-2016 PNUC_RS05055 529378b38a85d2ef459939a04e0416bd 336 PANTHER PTHR22602 15 252 1.0E-38 T 22-04-2016 PNUC_RS05055 529378b38a85d2ef459939a04e0416bd 336 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 191 255 1.2E-24 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site PNUC_RS05055 529378b38a85d2ef459939a04e0416bd 336 PANTHER PTHR22602:SF0 15 252 1.0E-38 T 22-04-2016 PNUC_RS05055 529378b38a85d2ef459939a04e0416bd 336 SUPERFAMILY SSF103025 20 245 1.02E-39 T 22-04-2016 PNUC_RS03870 fcc1b6ad6a18fc558cdf1255ead692fe 344 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 5 342 1.7E-125 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS03870 fcc1b6ad6a18fc558cdf1255ead692fe 344 SUPERFAMILY SSF51395 5 343 2.93E-101 T 22-04-2016 PNUC_RS03870 fcc1b6ad6a18fc558cdf1255ead692fe 344 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 82 101 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 PNUC_RS03870 fcc1b6ad6a18fc558cdf1255ead692fe 344 PANTHER PTHR11938 8 336 2.9E-85 T 22-04-2016 PNUC_RS03870 fcc1b6ad6a18fc558cdf1255ead692fe 344 Gene3D G3DSA:3.20.20.70 5 343 4.4E-120 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS03870 fcc1b6ad6a18fc558cdf1255ead692fe 344 Pfam PF01180 Dihydroorotate dehydrogenase 49 342 2.0E-86 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PNUC_RS03870 fcc1b6ad6a18fc558cdf1255ead692fe 344 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 4 341 48.433 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS03870 fcc1b6ad6a18fc558cdf1255ead692fe 344 PIRSF PIRSF000164 20 344 6.6E-92 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 PNUC_RS03870 fcc1b6ad6a18fc558cdf1255ead692fe 344 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 297 317 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 PNUC_RS05005 cc68e510985635e5bb681d48de95c4de 299 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 PNUC_RS05005 cc68e510985635e5bb681d48de95c4de 299 SUPERFAMILY SSF48179 166 294 5.44E-38 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS05005 cc68e510985635e5bb681d48de95c4de 299 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 287 5.0E-39 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PNUC_RS05005 cc68e510985635e5bb681d48de95c4de 299 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 164 8.1E-50 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PNUC_RS05005 cc68e510985635e5bb681d48de95c4de 299 Gene3D G3DSA:1.10.1040.10 167 294 5.8E-43 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PNUC_RS05005 cc68e510985635e5bb681d48de95c4de 299 PIRSF PIRSF000103 1 295 7.5E-74 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PNUC_RS05005 cc68e510985635e5bb681d48de95c4de 299 SUPERFAMILY SSF51735 5 165 9.58E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS05005 cc68e510985635e5bb681d48de95c4de 299 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 6 294 4.2E-126 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 PNUC_RS05005 cc68e510985635e5bb681d48de95c4de 299 Gene3D G3DSA:3.40.50.720 4 165 1.3E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS05005 cc68e510985635e5bb681d48de95c4de 299 PANTHER PTHR22981 1 299 3.5E-136 T 22-04-2016 PNUC_RS05005 cc68e510985635e5bb681d48de95c4de 299 PANTHER PTHR22981:SF70 1 299 3.5E-136 T 22-04-2016 PNUC_RS03210 cc0b9fc6536992a236ee2875fcd02fac 229 Gene3D G3DSA:3.40.50.620 5 229 1.1E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS03210 cc0b9fc6536992a236ee2875fcd02fac 229 SUPERFAMILY SSF52374 4 228 6.48E-41 T 22-04-2016 PNUC_RS03210 cc0b9fc6536992a236ee2875fcd02fac 229 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 7 65 3.0E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PNUC_RS03210 cc0b9fc6536992a236ee2875fcd02fac 229 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 9 206 6.9E-36 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 PNUC_RS03210 cc0b9fc6536992a236ee2875fcd02fac 229 Pfam PF01467 Cytidylyltransferase-like 9 200 9.2E-25 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PNUC_RS03210 cc0b9fc6536992a236ee2875fcd02fac 229 PANTHER PTHR39321 2 229 2.1E-27 T 22-04-2016 PNUC_RS03210 cc0b9fc6536992a236ee2875fcd02fac 229 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 5 229 26.757 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 PNUC_RS02605 ea87611cef170b73597bc4a621391865 220 Hamap MF_00238 Cytidylate kinase [cmk]. 5 219 31.4 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PNUC_RS02605 ea87611cef170b73597bc4a621391865 220 Gene3D G3DSA:3.40.50.300 5 216 2.7E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02605 ea87611cef170b73597bc4a621391865 220 SUPERFAMILY SSF52540 5 216 1.05E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02605 ea87611cef170b73597bc4a621391865 220 PANTHER PTHR21299 4 220 2.3E-53 T 22-04-2016 PNUC_RS02605 ea87611cef170b73597bc4a621391865 220 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 213 7.0E-67 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PNUC_RS02605 ea87611cef170b73597bc4a621391865 220 Pfam PF02224 Cytidylate kinase 7 215 2.1E-65 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 SMART SM01058 494 596 3.1E-42 T 22-04-2016 IPR003711 CarD-like/TRCF domain PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 Pfam PF02559 CarD-like/TRCF domain 495 595 2.4E-25 T 22-04-2016 IPR003711 CarD-like/TRCF domain PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 PANTHER PTHR14025:SF21 386 1161 0.0 T 22-04-2016 PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 SMART SM00490 846 930 5.8E-16 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 SUPERFAMILY SSF52540 803 1009 3.08E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 SUPERFAMILY SSF52540 543 803 1.02E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 SUPERFAMILY SSF143517 1014 1169 7.19E-37 T 22-04-2016 PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 Pfam PF03461 TRCF domain 1029 1121 6.7E-24 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 Gene3D G3DSA:3.40.50.300 820 976 1.4E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 SMART SM00982 1028 1128 1.1E-45 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 Pfam PF00271 Helicase conserved C-terminal domain 826 929 8.0E-17 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 SUPERFAMILY SSF52540 357 479 4.56E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 Gene3D G3DSA:3.30.2060.10 138 210 8.9E-12 T 22-04-2016 PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 152 1101 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 Gene3D G3DSA:3.40.50.300 614 806 3.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 SUPERFAMILY SSF141259 486 568 1.96E-19 T 22-04-2016 IPR003711 CarD-like/TRCF domain PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 PANTHER PTHR14025 386 1161 0.0 T 22-04-2016 PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1127 27.505 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 Pfam PF00270 DEAD/DEAH box helicase 625 782 2.9E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 SMART SM00487 620 810 3.5E-32 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PNUC_RS04835 888273fce0ba15072e966b88254e9720 1180 SUPERFAMILY SSF52540 16 349 9.75E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09910 5be78059b77673d09313d36d2d727642 107 Gene3D G3DSA:3.30.160.100 1 100 4.0E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PNUC_RS09910 5be78059b77673d09313d36d2d727642 107 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 3.8E-22 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PNUC_RS09910 5be78059b77673d09313d36d2d727642 107 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 104 1.8E-28 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PNUC_RS09910 5be78059b77673d09313d36d2d727642 107 PANTHER PTHR33231 1 106 2.0E-24 T 22-04-2016 PNUC_RS09910 5be78059b77673d09313d36d2d727642 107 SUPERFAMILY SSF69754 1 105 5.23E-30 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PNUC_RS04100 ded65cfdc2e7212600f9656a88702cbd 237 Gene3D G3DSA:1.10.760.10 37 104 5.9E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04100 ded65cfdc2e7212600f9656a88702cbd 237 PANTHER PTHR33751 1 229 4.6E-62 T 22-04-2016 PNUC_RS04100 ded65cfdc2e7212600f9656a88702cbd 237 Gene3D G3DSA:1.10.760.10 129 222 1.5E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04100 ded65cfdc2e7212600f9656a88702cbd 237 PIRSF PIRSF000005 1 224 3.6E-55 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 PNUC_RS04100 ded65cfdc2e7212600f9656a88702cbd 237 PANTHER PTHR33751:SF2 1 229 4.6E-62 T 22-04-2016 PNUC_RS04100 ded65cfdc2e7212600f9656a88702cbd 237 SUPERFAMILY SSF46626 124 221 1.65E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04100 ded65cfdc2e7212600f9656a88702cbd 237 Pfam PF00034 Cytochrome c 38 88 6.3E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04100 ded65cfdc2e7212600f9656a88702cbd 237 Pfam PF00034 Cytochrome c 140 222 4.9E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04100 ded65cfdc2e7212600f9656a88702cbd 237 SUPERFAMILY SSF46626 21 101 7.56E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS03915 999e5f72a94a7461f3185c86f45f4104 284 PIRSF PIRSF000105 1 284 1.6E-89 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 PNUC_RS03915 999e5f72a94a7461f3185c86f45f4104 284 SUPERFAMILY SSF48179 185 284 1.19E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS03915 999e5f72a94a7461f3185c86f45f4104 284 Gene3D G3DSA:3.40.50.720 1 187 7.1E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03915 999e5f72a94a7461f3185c86f45f4104 284 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 183 8.0E-66 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PNUC_RS03915 999e5f72a94a7461f3185c86f45f4104 284 SUPERFAMILY SSF51735 1 185 9.64E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03915 999e5f72a94a7461f3185c86f45f4104 284 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 4.2E-35 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PNUC_RS03915 999e5f72a94a7461f3185c86f45f4104 284 Gene3D G3DSA:1.10.1040.10 188 283 6.4E-35 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PNUC_RS03915 999e5f72a94a7461f3185c86f45f4104 284 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 207 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PNUC_RS03915 999e5f72a94a7461f3185c86f45f4104 284 PANTHER PTHR23309 1 284 8.5E-143 T 22-04-2016 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 Gene3D G3DSA:3.40.50.800 473 575 9.5E-31 T 22-04-2016 IPR004154 Anticodon-binding PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 PANTHER PTHR11451:SF3 4 244 1.8E-147 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 PANTHER PTHR11451:SF3 401 573 1.8E-147 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 4.2E-230 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 SUPERFAMILY SSF55826 218 391 3.66E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 PANTHER PTHR11451 4 244 1.8E-147 T 22-04-2016 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 PANTHER PTHR11451 401 573 1.8E-147 T 22-04-2016 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 SUPERFAMILY SSF55681 409 480 1.38E-103 T 22-04-2016 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 SUPERFAMILY SSF55681 10 237 1.38E-103 T 22-04-2016 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 Pfam PF03129 Anticodon binding domain 478 569 1.0E-17 T 22-04-2016 IPR004154 Anticodon-binding PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 Gene3D G3DSA:3.30.930.10 409 470 3.9E-105 T 22-04-2016 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 Gene3D G3DSA:3.30.930.10 1 228 3.9E-105 T 22-04-2016 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 4.1E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 4.1E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 4.1E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 4.1E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 Gene3D G3DSA:3.90.960.10 250 390 4.4E-29 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 PIRSF PIRSF001535 1 576 6.9E-267 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 573 40.893 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 Pfam PF04073 Aminoacyl-tRNA editing domain 257 381 1.0E-25 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 460 5.2E-49 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS01070 a53d5676a3a2fd91c716df7c3edfe85e 580 SUPERFAMILY SSF52954 466 572 3.62E-30 T 22-04-2016 IPR004154 Anticodon-binding PNUC_RS09610 1b3cc7db447e3ab2ee3252a81686ede1 230 Gene3D G3DSA:1.20.1050.10 102 220 1.4E-44 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS09610 1b3cc7db447e3ab2ee3252a81686ede1 230 PANTHER PTHR11260:SF289 8 220 5.7E-86 T 22-04-2016 PNUC_RS09610 1b3cc7db447e3ab2ee3252a81686ede1 230 SUPERFAMILY SSF47616 88 218 2.92E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS09610 1b3cc7db447e3ab2ee3252a81686ede1 230 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 87 1.3E-13 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PNUC_RS09610 1b3cc7db447e3ab2ee3252a81686ede1 230 SUPERFAMILY SSF52833 6 92 1.54E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS09610 1b3cc7db447e3ab2ee3252a81686ede1 230 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 8 219 6.6E-78 T 22-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 PNUC_RS09610 1b3cc7db447e3ab2ee3252a81686ede1 230 PANTHER PTHR11260 8 220 5.7E-86 T 22-04-2016 PNUC_RS09610 1b3cc7db447e3ab2ee3252a81686ede1 230 Gene3D G3DSA:3.40.30.10 4 101 8.2E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 Gene3D G3DSA:3.20.20.60 167 331 9.4E-91 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 Gene3D G3DSA:3.20.20.60 3 73 9.4E-91 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 SUPERFAMILY SSF51621 166 342 1.19E-85 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 SUPERFAMILY SSF51621 2 76 1.19E-85 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 PRINTS PR01050 Pyruvate kinase family signature 299 317 1.62E-43 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.62E-43 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 PRINTS PR01050 Pyruvate kinase family signature 318 334 1.62E-43 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 PRINTS PR01050 Pyruvate kinase family signature 249 273 1.62E-43 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 PRINTS PR01050 Pyruvate kinase family signature 274 298 1.62E-43 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 PRINTS PR01050 Pyruvate kinase family signature 185 199 1.62E-43 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 PANTHER PTHR11817 1 477 3.9E-221 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 Pfam PF00224 Pyruvate kinase, barrel domain 3 343 3.6E-115 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 PANTHER PTHR11817:SF17 1 477 3.9E-221 T 22-04-2016 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 Gene3D G3DSA:2.40.33.10 74 166 8.4E-28 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 SUPERFAMILY SSF50800 71 162 3.49E-26 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 SUPERFAMILY SSF52935 328 477 8.77E-34 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 475 7.4E-28 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 Gene3D G3DSA:3.40.1380.20 332 477 1.5E-35 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS09425 d5e1f89d6ff219e2b618d1e8f229cad6 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 477 1.6E-149 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS00965 9fa28b2eacb66517b1f4f0faed7885ad 411 PANTHER PTHR23100:SF0 17 411 3.9E-169 T 22-04-2016 PNUC_RS00965 9fa28b2eacb66517b1f4f0faed7885ad 411 SUPERFAMILY SSF56266 16 408 5.49E-139 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PNUC_RS00965 9fa28b2eacb66517b1f4f0faed7885ad 411 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 411 156.569 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PNUC_RS00965 9fa28b2eacb66517b1f4f0faed7885ad 411 PANTHER PTHR23100 17 411 3.9E-169 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PNUC_RS00965 9fa28b2eacb66517b1f4f0faed7885ad 411 Gene3D G3DSA:3.60.70.12 10 282 1.6E-96 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PNUC_RS00965 9fa28b2eacb66517b1f4f0faed7885ad 411 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 14 411 6.8E-123 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PNUC_RS00965 9fa28b2eacb66517b1f4f0faed7885ad 411 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 409 6.0E-151 T 22-04-2016 PNUC_RS00965 9fa28b2eacb66517b1f4f0faed7885ad 411 Pfam PF01960 ArgJ family 22 411 2.8E-142 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 387 1.2E-145 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 Pfam PF00117 Glutamine amidotransferase class-I 209 384 3.0E-47 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 Gene3D G3DSA:3.40.50.880 161 388 1.7E-81 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 SUPERFAMILY SSF52317 162 388 1.41E-62 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 Gene3D G3DSA:3.50.30.20 8 144 1.4E-58 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 135 9.0E-51 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 PANTHER PTHR11405 8 178 3.5E-230 T 22-04-2016 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 PANTHER PTHR11405 198 391 3.5E-230 T 22-04-2016 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 SMART SM01097 6 136 2.0E-87 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 PRINTS PR00096 Glutamine amidotransferase superfamily signature 248 257 9.0E-10 T 22-04-2016 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 PRINTS PR00096 Glutamine amidotransferase superfamily signature 276 287 9.0E-10 T 22-04-2016 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 PRINTS PR00096 Glutamine amidotransferase superfamily signature 361 374 9.0E-10 T 22-04-2016 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 293 310 6.5E-40 T 22-04-2016 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 245 259 6.5E-40 T 22-04-2016 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 318 329 6.5E-40 T 22-04-2016 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 276 292 6.5E-40 T 22-04-2016 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 206 220 6.5E-40 T 22-04-2016 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 390 48.633 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS05325 4a913201ff1a2463f2f2b5465a0039e0 394 SUPERFAMILY SSF52021 8 143 2.62E-54 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PNUC_RS10080 80a26000ebefaa0a9de30f2ebb0f812b 173 PANTHER PTHR36918 1 165 1.0E-45 T 22-04-2016 PNUC_RS10080 80a26000ebefaa0a9de30f2ebb0f812b 173 Pfam PF02556 Preprotein translocase subunit SecB 14 152 1.7E-49 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PNUC_RS10080 80a26000ebefaa0a9de30f2ebb0f812b 173 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 132 150 1.82E-26 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PNUC_RS10080 80a26000ebefaa0a9de30f2ebb0f812b 173 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 22 39 1.82E-26 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PNUC_RS10080 80a26000ebefaa0a9de30f2ebb0f812b 173 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 82 102 1.82E-26 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PNUC_RS10080 80a26000ebefaa0a9de30f2ebb0f812b 173 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 106 128 1.82E-26 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PNUC_RS10080 80a26000ebefaa0a9de30f2ebb0f812b 173 PANTHER PTHR36918:SF1 1 165 1.0E-45 T 22-04-2016 PNUC_RS10080 80a26000ebefaa0a9de30f2ebb0f812b 173 SUPERFAMILY SSF54611 10 149 4.14E-46 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PNUC_RS10080 80a26000ebefaa0a9de30f2ebb0f812b 173 Gene3D G3DSA:3.10.420.10 12 159 3.9E-54 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PNUC_RS10080 80a26000ebefaa0a9de30f2ebb0f812b 173 Hamap MF_00821 Protein-export protein SecB [secB]. 1 154 29.686 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PNUC_RS10080 80a26000ebefaa0a9de30f2ebb0f812b 173 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 16 149 8.3E-42 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PNUC_RS01550 76e0e7a032a38da6f61331e1f1c951e1 237 Gene3D G3DSA:3.30.1130.10 109 235 8.8E-40 T 22-04-2016 PNUC_RS01550 76e0e7a032a38da6f61331e1f1c951e1 237 Gene3D G3DSA:1.10.286.10 52 97 2.5E-14 T 22-04-2016 PNUC_RS01550 76e0e7a032a38da6f61331e1f1c951e1 237 PANTHER PTHR11109 76 237 5.9E-35 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PNUC_RS01550 76e0e7a032a38da6f61331e1f1c951e1 237 Pfam PF01227 GTP cyclohydrolase I 55 234 6.1E-52 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PNUC_RS01550 76e0e7a032a38da6f61331e1f1c951e1 237 SUPERFAMILY SSF55620 19 235 3.41E-62 T 22-04-2016 PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 79 2.4E-19 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 PANTHER PTHR15184:SF44 1 466 0.0 T 22-04-2016 PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 PANTHER PTHR15184 1 466 0.0 T 22-04-2016 PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 136 348 1.2E-63 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 SMART SM00382 148 333 0.0016 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 Gene3D G3DSA:3.40.50.300 82 349 5.6E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 56.701 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 Gene3D G3DSA:1.10.1140.10 351 466 2.2E-56 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 SUPERFAMILY SSF52540 83 353 5.87E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 SUPERFAMILY SSF47917 351 465 8.37E-55 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 Gene3D G3DSA:2.40.10.170 2 81 3.4E-29 T 22-04-2016 PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 466 6.6E-251 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00130 1328f6a66a887a2c15724db53baeca7d 466 SUPERFAMILY SSF50615 1 81 9.16E-25 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS01405 dab63bb127f639584cbddaf8a55c3f2f 381 PANTHER PTHR21327:SF6 9 380 8.2E-142 T 22-04-2016 PNUC_RS01405 dab63bb127f639584cbddaf8a55c3f2f 381 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 3 205 38.54 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01405 dab63bb127f639584cbddaf8a55c3f2f 381 SUPERFAMILY SSF55821 5 205 4.58E-87 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PNUC_RS01405 dab63bb127f639584cbddaf8a55c3f2f 381 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 8 201 2.3E-74 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01405 dab63bb127f639584cbddaf8a55c3f2f 381 PANTHER PTHR21327 9 380 8.2E-142 T 22-04-2016 PNUC_RS01405 dab63bb127f639584cbddaf8a55c3f2f 381 SUPERFAMILY SSF142695 207 374 5.23E-40 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PNUC_RS01405 dab63bb127f639584cbddaf8a55c3f2f 381 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 9 200 1.3E-83 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01405 dab63bb127f639584cbddaf8a55c3f2f 381 Gene3D G3DSA:3.90.870.10 4 211 1.4E-98 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PNUC_RS01405 dab63bb127f639584cbddaf8a55c3f2f 381 PIRSF PIRSF001259 3 380 1.4E-116 T 22-04-2016 PNUC_RS01405 dab63bb127f639584cbddaf8a55c3f2f 381 Pfam PF00925 GTP cyclohydrolase II 212 372 1.8E-30 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PNUC_RS06945 ef5126eadbf8d0b94be3f7c99a3f6533 240 Pfam PF13419 Haloacid dehalogenase-like hydrolase 95 202 1.0E-8 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS06945 ef5126eadbf8d0b94be3f7c99a3f6533 240 Gene3D G3DSA:3.40.50.1000 12 219 7.3E-31 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS06945 ef5126eadbf8d0b94be3f7c99a3f6533 240 SUPERFAMILY SSF56784 12 238 2.36E-36 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS06945 ef5126eadbf8d0b94be3f7c99a3f6533 240 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 13 208 5.5E-49 T 22-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 PNUC_RS06945 ef5126eadbf8d0b94be3f7c99a3f6533 240 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 15 194 3.4E-19 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS06945 ef5126eadbf8d0b94be3f7c99a3f6533 240 PANTHER PTHR12725 1 239 6.7E-52 T 22-04-2016 PNUC_RS06945 ef5126eadbf8d0b94be3f7c99a3f6533 240 PANTHER PTHR12725:SF66 1 239 6.7E-52 T 22-04-2016 PNUC_RS06945 ef5126eadbf8d0b94be3f7c99a3f6533 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 163 1.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS06945 ef5126eadbf8d0b94be3f7c99a3f6533 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 1.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS06945 ef5126eadbf8d0b94be3f7c99a3f6533 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 165 185 1.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS06945 ef5126eadbf8d0b94be3f7c99a3f6533 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 192 205 1.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 Gene3D G3DSA:3.10.20.30 11 69 1.3E-10 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 Gene3D G3DSA:2.20.25.90 240 293 5.6E-24 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 Pfam PF01568 Molydopterin dinucleotide binding domain 829 935 1.0E-26 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 684 701 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 Pfam PF00384 Molybdopterin oxidoreductase 295 739 1.4E-89 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 PANTHER PTHR11615 237 958 2.1E-220 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 PANTHER PTHR11615 16 64 2.1E-220 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 Gene3D G3DSA:3.40.228.10 385 564 2.9E-69 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 240 292 1.9E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 245 937 4.4E-218 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 SUPERFAMILY SSF54862 88 232 1.0E-27 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 212 223 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 Gene3D G3DSA:3.40.50.740 565 796 6.0E-85 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 Gene3D G3DSA:3.40.50.740 295 383 6.0E-85 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 SMART SM00926 239 292 1.9E-19 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 SUPERFAMILY SSF54292 15 113 1.01E-29 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 SUPERFAMILY SSF50692 793 940 1.62E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 PANTHER PTHR11615:SF112 237 958 2.1E-220 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 PANTHER PTHR11615:SF112 16 64 2.1E-220 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 Gene3D G3DSA:3.30.70.20 154 227 2.0E-13 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 SUPERFAMILY SSF53706 241 847 1.7E-197 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 Pfam PF13187 4Fe-4S dicluster domain 168 226 5.7E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 88 6.0E-18 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 Gene3D G3DSA:2.40.40.20 797 940 3.5E-40 T 22-04-2016 PNUC_RS05800 5e829e0212cff3b37da440be574552ca 963 PIRSF PIRSF036643 10 956 0.0 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 PNUC_RS06965 12546d7912fec7be94b293b95e19dd68 347 PANTHER PTHR11820:SF6 35 343 3.2E-87 T 22-04-2016 PNUC_RS06965 12546d7912fec7be94b293b95e19dd68 347 Gene3D G3DSA:3.90.850.10 133 346 5.3E-72 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS06965 12546d7912fec7be94b293b95e19dd68 347 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 136 346 5.5E-57 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS06965 12546d7912fec7be94b293b95e19dd68 347 SUPERFAMILY SSF56529 129 346 1.96E-64 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS06965 12546d7912fec7be94b293b95e19dd68 347 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 26 5.4E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PNUC_RS06965 12546d7912fec7be94b293b95e19dd68 347 PANTHER PTHR11820 35 343 3.2E-87 T 22-04-2016 PNUC_RS10310 422dd47b94667affbdf5f5a24cd85ffb 506 Pfam PF12804 MobA-like NTP transferase domain 4 153 6.4E-17 T 22-04-2016 IPR025877 MobA-like NTP transferase PNUC_RS10310 422dd47b94667affbdf5f5a24cd85ffb 506 SUPERFAMILY SSF53448 1 265 2.29E-55 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS10310 422dd47b94667affbdf5f5a24cd85ffb 506 PANTHER PTHR22572:SF115 2 461 6.8E-193 T 22-04-2016 PNUC_RS10310 422dd47b94667affbdf5f5a24cd85ffb 506 Gene3D G3DSA:2.160.10.10 259 336 7.9E-16 T 22-04-2016 PNUC_RS10310 422dd47b94667affbdf5f5a24cd85ffb 506 Gene3D G3DSA:2.160.10.10 337 465 1.1E-31 T 22-04-2016 PNUC_RS10310 422dd47b94667affbdf5f5a24cd85ffb 506 PANTHER PTHR22572 2 461 6.8E-193 T 22-04-2016 PNUC_RS10310 422dd47b94667affbdf5f5a24cd85ffb 506 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 465 3.1E-172 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 PNUC_RS10310 422dd47b94667affbdf5f5a24cd85ffb 506 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 408 442 1.1E-6 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS10310 422dd47b94667affbdf5f5a24cd85ffb 506 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 313 346 3.4E-6 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS10310 422dd47b94667affbdf5f5a24cd85ffb 506 SUPERFAMILY SSF51161 269 451 6.44E-48 T 22-04-2016 IPR011004 Trimeric LpxA-like PNUC_RS10310 422dd47b94667affbdf5f5a24cd85ffb 506 Gene3D G3DSA:3.90.550.10 1 258 1.8E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS10310 422dd47b94667affbdf5f5a24cd85ffb 506 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 465 38.94 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 PNUC_RS07080 1516ffa674edcefb38ff492f9f751a20 349 SUPERFAMILY SSF56529 131 348 3.92E-72 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS07080 1516ffa674edcefb38ff492f9f751a20 349 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 134 348 1.0E-65 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS07080 1516ffa674edcefb38ff492f9f751a20 349 PANTHER PTHR11820 26 348 8.3E-96 T 22-04-2016 PNUC_RS07080 1516ffa674edcefb38ff492f9f751a20 349 PANTHER PTHR11820:SF6 26 348 8.3E-96 T 22-04-2016 PNUC_RS07080 1516ffa674edcefb38ff492f9f751a20 349 Gene3D G3DSA:3.90.850.10 127 348 3.1E-76 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 SMART SM00919 172 409 7.2E-133 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 PIRSF PIRSF036684 7 770 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 Pfam PF12434 Malate dehydrogenase enzyme 2 25 1.2E-13 T 22-04-2016 IPR032683 Malate dehydrogenase enzyme, N-terminal PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 Gene3D G3DSA:3.40.50.720 170 457 1.2E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 ProSitePatterns PS00331 Malic enzymes signature. 168 184 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 PANTHER PTHR23406 41 364 1.3E-158 T 22-04-2016 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 PANTHER PTHR23406 381 433 1.3E-158 T 22-04-2016 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 SUPERFAMILY SSF51735 172 448 1.89E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 Gene3D G3DSA:3.40.50.10380 19 169 1.1E-50 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 Pfam PF00390 Malic enzyme, N-terminal domain 28 160 1.5E-27 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 SUPERFAMILY SSF53223 19 170 5.47E-53 T 22-04-2016 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 SUPERFAMILY SSF53659 438 765 6.58E-82 T 22-04-2016 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 Pfam PF03949 Malic enzyme, NAD binding domain 174 369 2.7E-20 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 Gene3D G3DSA:3.40.50.10750 580 737 3.2E-47 T 22-04-2016 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 SMART SM01274 27 160 8.2E-80 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PNUC_RS01195 0d06f1aa4be49dd634dcb66b09326142 773 Pfam PF01515 Phosphate acetyl/butaryl transferase 445 761 9.3E-89 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PNUC_RS06215 1ab85d2029b125b1a4bd89d457cc3fdf 262 PANTHER PTHR24220:SF14 9 213 2.6E-91 T 22-04-2016 PNUC_RS06215 1ab85d2029b125b1a4bd89d457cc3fdf 262 SMART SM00382 36 215 3.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS06215 1ab85d2029b125b1a4bd89d457cc3fdf 262 Pfam PF00005 ABC transporter 27 166 9.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS06215 1ab85d2029b125b1a4bd89d457cc3fdf 262 Gene3D G3DSA:3.40.50.300 8 214 4.2E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06215 1ab85d2029b125b1a4bd89d457cc3fdf 262 SUPERFAMILY SSF52540 8 231 3.04E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06215 1ab85d2029b125b1a4bd89d457cc3fdf 262 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS06215 1ab85d2029b125b1a4bd89d457cc3fdf 262 PANTHER PTHR24220 9 213 2.6E-91 T 22-04-2016 PNUC_RS09740 9e49534e857e38e4977160ff365a8c04 172 Gene3D G3DSA:3.30.420.10 1 156 1.5E-61 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS09740 9e49534e857e38e4977160ff365a8c04 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 2.8E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PNUC_RS09740 9e49534e857e38e4977160ff365a8c04 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 2.8E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PNUC_RS09740 9e49534e857e38e4977160ff365a8c04 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 2.8E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PNUC_RS09740 9e49534e857e38e4977160ff365a8c04 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 2.8E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PNUC_RS09740 9e49534e857e38e4977160ff365a8c04 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.8E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PNUC_RS09740 9e49534e857e38e4977160ff365a8c04 172 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 148 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 PNUC_RS09740 9e49534e857e38e4977160ff365a8c04 172 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 45.102 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PNUC_RS09740 9e49534e857e38e4977160ff365a8c04 172 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.2E-47 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PNUC_RS09740 9e49534e857e38e4977160ff365a8c04 172 PANTHER PTHR30194 1 170 1.0E-58 T 22-04-2016 PNUC_RS09740 9e49534e857e38e4977160ff365a8c04 172 SUPERFAMILY SSF53098 1 156 2.69E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS09740 9e49534e857e38e4977160ff365a8c04 172 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 1.1E-50 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PNUC_RS04830 5df4afa15c209aca2f17f65404edffaa 296 PANTHER PTHR10000 89 295 1.9E-64 T 22-04-2016 PNUC_RS04830 5df4afa15c209aca2f17f65404edffaa 296 Gene3D G3DSA:1.10.150.210 100 151 5.8E-23 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 PNUC_RS04830 5df4afa15c209aca2f17f65404edffaa 296 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 87 289 1.0E-60 T 22-04-2016 PNUC_RS04830 5df4afa15c209aca2f17f65404edffaa 296 SUPERFAMILY SSF56784 88 292 1.55E-44 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS04830 5df4afa15c209aca2f17f65404edffaa 296 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 91 260 8.8E-29 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PNUC_RS04830 5df4afa15c209aca2f17f65404edffaa 296 Gene3D G3DSA:3.40.50.1000 152 282 1.0E-37 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS04830 5df4afa15c209aca2f17f65404edffaa 296 PANTHER PTHR10000:SF7 89 295 1.9E-64 T 22-04-2016 PNUC_RS04830 5df4afa15c209aca2f17f65404edffaa 296 Pfam PF12710 haloacid dehalogenase-like hydrolase 93 260 4.4E-20 T 22-04-2016 PNUC_RS02465 a2c7eacb4649b8158e5c45053a52be2e 313 SUPERFAMILY SSF48179 183 289 5.95E-20 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS02465 a2c7eacb4649b8158e5c45053a52be2e 313 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 181 1.7E-42 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PNUC_RS02465 a2c7eacb4649b8158e5c45053a52be2e 313 PANTHER PTHR23309 9 280 1.6E-82 T 22-04-2016 PNUC_RS02465 a2c7eacb4649b8158e5c45053a52be2e 313 Gene3D G3DSA:1.10.1040.10 186 282 3.6E-19 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PNUC_RS02465 a2c7eacb4649b8158e5c45053a52be2e 313 SUPERFAMILY SSF51735 8 180 1.9E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02465 a2c7eacb4649b8158e5c45053a52be2e 313 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 181 205 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PNUC_RS02465 a2c7eacb4649b8158e5c45053a52be2e 313 PIRSF PIRSF000105 4 311 5.5E-72 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 PNUC_RS02465 a2c7eacb4649b8158e5c45053a52be2e 313 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 184 280 8.0E-17 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PNUC_RS02465 a2c7eacb4649b8158e5c45053a52be2e 313 Gene3D G3DSA:3.40.50.720 8 185 3.9E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01495 c42108b3e8163f55b3f00e9acec9f74b 363 PANTHER PTHR30160 11 345 2.4E-61 T 22-04-2016 PNUC_RS01495 c42108b3e8163f55b3f00e9acec9f74b 363 SUPERFAMILY SSF52540 54 161 2.43E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01495 c42108b3e8163f55b3f00e9acec9f74b 363 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 26 343 2.0E-65 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 PNUC_RS01495 c42108b3e8163f55b3f00e9acec9f74b 363 PANTHER PTHR30160:SF13 11 345 2.4E-61 T 22-04-2016 PNUC_RS01495 c42108b3e8163f55b3f00e9acec9f74b 363 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 8 354 34.743 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 PNUC_RS01495 c42108b3e8163f55b3f00e9acec9f74b 363 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 20 353 9.1E-101 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 PNUC_RS01495 c42108b3e8163f55b3f00e9acec9f74b 363 Gene3D G3DSA:3.40.50.300 52 154 1.3E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05445 7e2a1f42bc5163ad4c2d02c9f1b4262f 163 Pfam PF12838 4Fe-4S dicluster domain 63 117 6.5E-14 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS05445 7e2a1f42bc5163ad4c2d02c9f1b4262f 163 PANTHER PTHR10849 5 163 6.7E-81 T 22-04-2016 PNUC_RS05445 7e2a1f42bc5163ad4c2d02c9f1b4262f 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 1.6E-48 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 PNUC_RS05445 7e2a1f42bc5163ad4c2d02c9f1b4262f 163 SUPERFAMILY SSF54862 37 146 3.85E-28 T 22-04-2016 PNUC_RS05445 7e2a1f42bc5163ad4c2d02c9f1b4262f 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 150 28.693 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 PNUC_RS05445 7e2a1f42bc5163ad4c2d02c9f1b4262f 163 Gene3D G3DSA:1.10.1060.10 19 125 6.8E-24 T 22-04-2016 PNUC_RS05445 7e2a1f42bc5163ad4c2d02c9f1b4262f 163 PANTHER PTHR10849:SF20 5 163 6.7E-81 T 22-04-2016 PNUC_RS05445 7e2a1f42bc5163ad4c2d02c9f1b4262f 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS05445 7e2a1f42bc5163ad4c2d02c9f1b4262f 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS02725 b5aeff6810ae2e160db49f5e6bbf8069 309 SUPERFAMILY SSF52540 84 301 5.41E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02725 b5aeff6810ae2e160db49f5e6bbf8069 309 PANTHER PTHR32120 49 306 1.8E-80 T 22-04-2016 PNUC_RS02725 b5aeff6810ae2e160db49f5e6bbf8069 309 Gene3D G3DSA:3.40.50.300 84 249 3.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02725 b5aeff6810ae2e160db49f5e6bbf8069 309 PANTHER PTHR32120:SF2 49 306 1.8E-80 T 22-04-2016 PNUC_RS02725 b5aeff6810ae2e160db49f5e6bbf8069 309 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 4 308 29.34 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 PNUC_RS02725 b5aeff6810ae2e160db49f5e6bbf8069 309 Pfam PF03193 Protein of unknown function, DUF258 68 249 2.5E-45 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 PNUC_RS02725 b5aeff6810ae2e160db49f5e6bbf8069 309 Gene3D G3DSA:1.10.40.50 251 307 2.0E-20 T 22-04-2016 PNUC_RS02725 b5aeff6810ae2e160db49f5e6bbf8069 309 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 49 306 7.6E-60 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 PRINTS PR00113 Alkaline phosphatase signature 124 144 2.3E-34 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 PRINTS PR00113 Alkaline phosphatase signature 224 244 2.3E-34 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 PRINTS PR00113 Alkaline phosphatase signature 357 386 2.3E-34 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 PRINTS PR00113 Alkaline phosphatase signature 179 194 2.3E-34 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 PRINTS PR00113 Alkaline phosphatase signature 268 278 2.3E-34 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 PANTHER PTHR11596:SF5 511 579 4.3E-123 T 22-04-2016 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 PANTHER PTHR11596:SF5 51 479 4.3E-123 T 22-04-2016 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 PANTHER PTHR11596 511 579 4.3E-123 T 22-04-2016 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 PANTHER PTHR11596 51 479 4.3E-123 T 22-04-2016 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 SMART SM00098 125 579 1.7E-42 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 Gene3D G3DSA:3.40.720.10 119 480 9.4E-121 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 Gene3D G3DSA:3.40.720.10 520 579 9.4E-121 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 SUPERFAMILY SSF53649 116 443 4.97E-112 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 SUPERFAMILY SSF53649 474 579 4.97E-112 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PNUC_RS08295 693f3995eeec84842a3ad0fe0efef131 581 Pfam PF00245 Alkaline phosphatase 125 577 1.5E-77 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PNUC_RS05315 0821c42263969d0a834aab111bb5cb32 158 Gene3D G3DSA:1.10.287.180 1 75 5.3E-33 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PNUC_RS05315 0821c42263969d0a834aab111bb5cb32 158 PIRSF PIRSF006092 1 158 6.1E-51 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PNUC_RS05315 0821c42263969d0a834aab111bb5cb32 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.5E-53 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 PNUC_RS05315 0821c42263969d0a834aab111bb5cb32 158 SUPERFAMILY SSF54534 84 157 6.8E-23 T 22-04-2016 PNUC_RS05315 0821c42263969d0a834aab111bb5cb32 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PNUC_RS05315 0821c42263969d0a834aab111bb5cb32 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.9E-30 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PNUC_RS05315 0821c42263969d0a834aab111bb5cb32 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 157 1.1E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PNUC_RS05315 0821c42263969d0a834aab111bb5cb32 158 Gene3D G3DSA:3.10.50.30 83 157 3.6E-30 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PNUC_RS05315 0821c42263969d0a834aab111bb5cb32 158 PANTHER PTHR30437 1 157 8.5E-60 T 22-04-2016 PNUC_RS05315 0821c42263969d0a834aab111bb5cb32 158 SUPERFAMILY SSF46557 3 77 4.32E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PNUC_RS05315 0821c42263969d0a834aab111bb5cb32 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PNUC_RS05315 0821c42263969d0a834aab111bb5cb32 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.337 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PNUC_RS09800 87bde72cd7dd41c675947eb594e6990a 607 Gene3D G3DSA:1.20.1560.10 27 343 3.5E-67 T 22-04-2016 PNUC_RS09800 87bde72cd7dd41c675947eb594e6990a 607 PANTHER PTHR24221:SF18 10 603 0.0 T 22-04-2016 PNUC_RS09800 87bde72cd7dd41c675947eb594e6990a 607 SMART SM00382 391 571 9.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS09800 87bde72cd7dd41c675947eb594e6990a 607 SUPERFAMILY SSF90123 26 345 3.14E-63 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PNUC_RS09800 87bde72cd7dd41c675947eb594e6990a 607 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS09800 87bde72cd7dd41c675947eb594e6990a 607 Pfam PF00005 ABC transporter 382 531 1.3E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS09800 87bde72cd7dd41c675947eb594e6990a 607 Gene3D G3DSA:3.40.50.300 366 597 2.9E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09800 87bde72cd7dd41c675947eb594e6990a 607 SUPERFAMILY SSF52540 362 601 1.51E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09800 87bde72cd7dd41c675947eb594e6990a 607 PANTHER PTHR24221 10 603 0.0 T 22-04-2016 PNUC_RS09800 87bde72cd7dd41c675947eb594e6990a 607 Pfam PF00664 ABC transporter transmembrane region 39 314 3.0E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PNUC_RS04915 ef5797ca9c209b0c340702f859bae6b3 62 ProDom PD028561 MEMBRANE IMMUNITY SUPERINFECTION GP66 PROTEIN IMM GP75 IMM RB69 INTEGRAL 16 55 2.0E-8 T 22-04-2016 IPR016410 Bacteriophage-associated immunity protein PNUC_RS04915 ef5797ca9c209b0c340702f859bae6b3 62 Pfam PF14373 Superinfection immunity protein 15 56 1.1E-18 T 22-04-2016 IPR016410 Bacteriophage-associated immunity protein PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 SUPERFAMILY SSF50494 57 278 8.21E-65 T 22-04-2016 IPR009003 Peptidase S1, PA clan PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 SUPERFAMILY SSF50156 245 371 2.37E-22 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 Gene3D G3DSA:2.40.10.10 58 172 3.8E-35 T 22-04-2016 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 Pfam PF13365 Trypsin-like peptidase domain 113 248 2.0E-33 T 22-04-2016 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 PANTHER PTHR22939 95 383 1.1E-123 T 22-04-2016 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 PANTHER PTHR22939 58 79 1.1E-123 T 22-04-2016 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 Gene3D G3DSA:2.30.42.10 289 386 3.8E-25 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 SMART SM00228 287 370 2.6E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 Gene3D G3DSA:2.40.10.10 176 288 1.2E-41 T 22-04-2016 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 PRINTS PR00834 HtrA/DegQ protease family signature 184 208 2.2E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 PRINTS PR00834 HtrA/DegQ protease family signature 328 340 2.2E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 PRINTS PR00834 HtrA/DegQ protease family signature 143 163 2.2E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 PRINTS PR00834 HtrA/DegQ protease family signature 122 134 2.2E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 2.2E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 PRINTS PR00834 HtrA/DegQ protease family signature 241 258 2.2E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 PANTHER PTHR22939:SF93 95 383 1.1E-123 T 22-04-2016 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 PANTHER PTHR22939:SF93 58 79 1.1E-123 T 22-04-2016 PNUC_RS00670 04f71c4c558749fc65d4471e5b1c55dd 390 Pfam PF13180 PDZ domain 287 378 1.2E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS01445 992907799f7f8da7853bee887c7b57c7 167 SUPERFAMILY SSF103088 57 164 1.03E-30 T 22-04-2016 IPR006665 OmpA-like domain PNUC_RS01445 992907799f7f8da7853bee887c7b57c7 167 PANTHER PTHR30128:SF18 62 165 1.3E-43 T 22-04-2016 PNUC_RS01445 992907799f7f8da7853bee887c7b57c7 167 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 61 164 1.3E-42 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 PNUC_RS01445 992907799f7f8da7853bee887c7b57c7 167 Gene3D G3DSA:3.30.1330.60 53 165 7.0E-32 T 22-04-2016 IPR006665 OmpA-like domain PNUC_RS01445 992907799f7f8da7853bee887c7b57c7 167 PRINTS PR01021 OMPA domain signature 64 86 3.4E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PNUC_RS01445 992907799f7f8da7853bee887c7b57c7 167 PRINTS PR01021 OMPA domain signature 94 109 3.4E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PNUC_RS01445 992907799f7f8da7853bee887c7b57c7 167 PRINTS PR01021 OMPA domain signature 109 125 3.4E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PNUC_RS01445 992907799f7f8da7853bee887c7b57c7 167 PANTHER PTHR30128 62 165 1.3E-43 T 22-04-2016 PNUC_RS01445 992907799f7f8da7853bee887c7b57c7 167 Pfam PF00691 OmpA family 63 158 1.6E-20 T 22-04-2016 IPR006665 OmpA-like domain PNUC_RS08215 f05a33c2abd8408833fe195df65c659c 217 Gene3D G3DSA:2.60.120.10 126 214 2.7E-31 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS08215 f05a33c2abd8408833fe195df65c659c 217 Gene3D G3DSA:2.60.120.10 17 118 4.1E-37 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS08215 f05a33c2abd8408833fe195df65c659c 217 Pfam PF12973 ChrR Cupin-like domain 19 108 2.1E-39 T 22-04-2016 IPR025979 ChrR-like cupin domain PNUC_RS08215 f05a33c2abd8408833fe195df65c659c 217 Pfam PF12973 ChrR Cupin-like domain 127 212 1.1E-35 T 22-04-2016 IPR025979 ChrR-like cupin domain PNUC_RS08215 f05a33c2abd8408833fe195df65c659c 217 SUPERFAMILY SSF51182 113 215 6.68E-24 T 22-04-2016 IPR011051 RmlC-like cupin domain PNUC_RS08215 f05a33c2abd8408833fe195df65c659c 217 SUPERFAMILY SSF51182 3 115 5.2E-32 T 22-04-2016 IPR011051 RmlC-like cupin domain PNUC_RS04780 39e6f6e9967caacf376c9d3a6e09832f 439 SUPERFAMILY SSF103473 2 425 9.94E-24 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS04780 39e6f6e9967caacf376c9d3a6e09832f 439 PANTHER PTHR23513:SF8 332 425 2.3E-75 T 22-04-2016 PNUC_RS04780 39e6f6e9967caacf376c9d3a6e09832f 439 PANTHER PTHR23513:SF8 1 313 2.3E-75 T 22-04-2016 PNUC_RS04780 39e6f6e9967caacf376c9d3a6e09832f 439 Gene3D G3DSA:1.20.1250.20 2 196 1.3E-10 T 22-04-2016 PNUC_RS04780 39e6f6e9967caacf376c9d3a6e09832f 439 Pfam PF07690 Major Facilitator Superfamily 9 360 5.3E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS04780 39e6f6e9967caacf376c9d3a6e09832f 439 PANTHER PTHR23513 332 425 2.3E-75 T 22-04-2016 PNUC_RS04780 39e6f6e9967caacf376c9d3a6e09832f 439 PANTHER PTHR23513 1 313 2.3E-75 T 22-04-2016 PNUC_RS09615 714576cd74a3b656fb125670a37dc0da 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 45 0.0013 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS09615 714576cd74a3b656fb125670a37dc0da 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 1.6E-9 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS09615 714576cd74a3b656fb125670a37dc0da 174 SUPERFAMILY SSF51161 7 170 3.74E-47 T 22-04-2016 IPR011004 Trimeric LpxA-like PNUC_RS09615 714576cd74a3b656fb125670a37dc0da 174 PANTHER PTHR13061 1 172 4.0E-64 T 22-04-2016 PNUC_RS09615 714576cd74a3b656fb125670a37dc0da 174 Gene3D G3DSA:2.160.10.10 10 169 4.4E-45 T 22-04-2016 PNUC_RS09460 361fd73b581f87752e8cbf3d321c1ab5 562 SMART SM00028 369 402 0.047 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09460 361fd73b581f87752e8cbf3d321c1ab5 562 SMART SM00028 499 532 210.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09460 361fd73b581f87752e8cbf3d321c1ab5 562 Gene3D G3DSA:1.25.40.10 368 527 1.3E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09460 361fd73b581f87752e8cbf3d321c1ab5 562 SUPERFAMILY SSF48452 370 497 9.19E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09460 361fd73b581f87752e8cbf3d321c1ab5 562 PANTHER PTHR22726:SF10 71 412 4.8E-67 T 22-04-2016 PNUC_RS09460 361fd73b581f87752e8cbf3d321c1ab5 562 PANTHER PTHR22726 71 412 4.8E-67 T 22-04-2016 PNUC_RS09460 361fd73b581f87752e8cbf3d321c1ab5 562 Pfam PF14559 Tetratricopeptide repeat 424 487 2.7E-8 T 22-04-2016 PNUC_RS09460 361fd73b581f87752e8cbf3d321c1ab5 562 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 12 554 28.564 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 PNUC_RS09460 361fd73b581f87752e8cbf3d321c1ab5 562 Pfam PF01435 Peptidase family M48 143 316 8.8E-31 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PNUC_RS09460 361fd73b581f87752e8cbf3d321c1ab5 562 Gene3D G3DSA:3.30.2010.10 138 206 3.1E-15 T 22-04-2016 PNUC_RS10190 1708247b5b451d17f81bc25c683f9b42 262 PANTHER PTHR12835 6 259 3.3E-50 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 PNUC_RS10190 1708247b5b451d17f81bc25c683f9b42 262 SUPERFAMILY SSF55681 4 210 3.15E-43 T 22-04-2016 PNUC_RS10190 1708247b5b451d17f81bc25c683f9b42 262 Gene3D G3DSA:2.30.30.100 213 260 2.2E-12 T 22-04-2016 PNUC_RS10190 1708247b5b451d17f81bc25c683f9b42 262 Pfam PF03099 Biotin/lipoate A/B protein ligase family 13 145 1.8E-13 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 PNUC_RS10190 1708247b5b451d17f81bc25c683f9b42 262 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 11 259 4.1E-40 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 PNUC_RS10190 1708247b5b451d17f81bc25c683f9b42 262 Pfam PF02237 Biotin protein ligase C terminal domain 227 259 2.4E-4 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 PNUC_RS10190 1708247b5b451d17f81bc25c683f9b42 262 Gene3D G3DSA:3.30.930.10 8 209 9.1E-49 T 22-04-2016 PNUC_RS10190 1708247b5b451d17f81bc25c683f9b42 262 SUPERFAMILY SSF50037 223 259 2.84E-6 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal PNUC_RS09730 cbb77daf827975b0b097cc6327650df2 79 Pfam PF02954 Bacterial regulatory protein, Fis family 35 72 2.5E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PNUC_RS09730 cbb77daf827975b0b097cc6327650df2 79 Gene3D G3DSA:1.10.10.60 8 77 3.8E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS09730 cbb77daf827975b0b097cc6327650df2 79 SUPERFAMILY SSF46689 6 77 3.48E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS09730 cbb77daf827975b0b097cc6327650df2 79 PIRSF PIRSF002097 1 78 1.4E-29 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PNUC_RS09730 cbb77daf827975b0b097cc6327650df2 79 PRINTS PR01591 DNA-binding protein FIS signature 22 37 1.0E-6 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PNUC_RS09730 cbb77daf827975b0b097cc6327650df2 79 PRINTS PR01591 DNA-binding protein FIS signature 6 22 1.0E-6 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PNUC_RS09730 cbb77daf827975b0b097cc6327650df2 79 PRINTS PR01591 DNA-binding protein FIS signature 37 49 1.0E-6 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PNUC_RS09730 cbb77daf827975b0b097cc6327650df2 79 PANTHER PTHR32071 6 77 7.6E-14 T 22-04-2016 PNUC_RS09730 cbb77daf827975b0b097cc6327650df2 79 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 41 58 5.6E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PNUC_RS09730 cbb77daf827975b0b097cc6327650df2 79 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 58 78 5.6E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PNUC_RS08035 cc3b73015d0becb3e445ac3ee390cc63 337 PIRSF PIRSF006470 1 333 8.7E-81 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PNUC_RS08035 cc3b73015d0becb3e445ac3ee390cc63 337 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 35 291 4.8E-76 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PNUC_RS08035 cc3b73015d0becb3e445ac3ee390cc63 337 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 28 3.2E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PNUC_RS08035 cc3b73015d0becb3e445ac3ee390cc63 337 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 310 2.3E-79 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PNUC_RS08035 cc3b73015d0becb3e445ac3ee390cc63 337 PANTHER PTHR33376 2 337 4.4E-128 T 22-04-2016 PNUC_RS08035 cc3b73015d0becb3e445ac3ee390cc63 337 PANTHER PTHR33376:SF4 2 337 4.4E-128 T 22-04-2016 PNUC_RS09865 a596c4ea1d04e91b87c1f5cc25e7a48f 151 Pfam PF00436 Single-strand binding protein family 4 108 1.1E-43 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 PNUC_RS09865 a596c4ea1d04e91b87c1f5cc25e7a48f 151 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 151 4.8E-53 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PNUC_RS09865 a596c4ea1d04e91b87c1f5cc25e7a48f 151 PANTHER PTHR10302 3 151 2.1E-52 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PNUC_RS09865 a596c4ea1d04e91b87c1f5cc25e7a48f 151 PIRSF PIRSF002070 1 150 8.4E-38 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PNUC_RS09865 a596c4ea1d04e91b87c1f5cc25e7a48f 151 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 39.241 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PNUC_RS09865 a596c4ea1d04e91b87c1f5cc25e7a48f 151 Gene3D G3DSA:2.40.50.140 1 151 4.1E-60 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS09865 a596c4ea1d04e91b87c1f5cc25e7a48f 151 SUPERFAMILY SSF50249 3 151 7.2E-58 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS07535 9cedb3476684f24f671c30461c9fdfe9 149 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 7 146 35.541 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PNUC_RS07535 9cedb3476684f24f671c30461c9fdfe9 149 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 7 143 9.5E-59 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PNUC_RS07535 9cedb3476684f24f671c30461c9fdfe9 149 Pfam PF07977 FabA-like domain 16 138 9.6E-35 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PNUC_RS07535 9cedb3476684f24f671c30461c9fdfe9 149 Gene3D G3DSA:3.10.129.10 6 145 2.1E-57 T 22-04-2016 IPR029069 HotDog domain PNUC_RS07535 9cedb3476684f24f671c30461c9fdfe9 149 SUPERFAMILY SSF54637 9 147 3.44E-49 T 22-04-2016 IPR029069 HotDog domain PNUC_RS07535 9cedb3476684f24f671c30461c9fdfe9 149 PANTHER PTHR30272 7 148 8.3E-76 T 22-04-2016 PNUC_RS05345 7a07a7e302b8c03f88bf62f1ba1e140b 272 Pfam PF08241 Methyltransferase domain 88 139 1.5E-11 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PNUC_RS05345 7a07a7e302b8c03f88bf62f1ba1e140b 272 PANTHER PTHR10108:SF836 89 245 1.8E-25 T 22-04-2016 PNUC_RS05345 7a07a7e302b8c03f88bf62f1ba1e140b 272 PANTHER PTHR10108 89 245 1.8E-25 T 22-04-2016 PNUC_RS05345 7a07a7e302b8c03f88bf62f1ba1e140b 272 SUPERFAMILY SSF53335 76 231 4.06E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS05345 7a07a7e302b8c03f88bf62f1ba1e140b 272 Gene3D G3DSA:3.40.50.150 87 232 5.1E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS10115 793c294e06f75a757cbb233379973da9 89 Pfam PF00381 PTS HPr component phosphorylation site 5 82 2.6E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like PNUC_RS10115 793c294e06f75a757cbb233379973da9 89 PANTHER PTHR33705:SF2 1 89 5.8E-39 T 22-04-2016 PNUC_RS10115 793c294e06f75a757cbb233379973da9 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 2.7E-30 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like PNUC_RS10115 793c294e06f75a757cbb233379973da9 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 7.5E-14 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like PNUC_RS10115 793c294e06f75a757cbb233379973da9 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 7.5E-14 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like PNUC_RS10115 793c294e06f75a757cbb233379973da9 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 7.5E-14 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like PNUC_RS10115 793c294e06f75a757cbb233379973da9 89 SUPERFAMILY SSF55594 1 87 5.36E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like PNUC_RS10115 793c294e06f75a757cbb233379973da9 89 Gene3D G3DSA:3.30.1340.10 1 87 4.5E-30 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like PNUC_RS10115 793c294e06f75a757cbb233379973da9 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PNUC_RS10115 793c294e06f75a757cbb233379973da9 89 PANTHER PTHR33705 1 89 5.8E-39 T 22-04-2016 PNUC_RS10115 793c294e06f75a757cbb233379973da9 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PNUC_RS05185 f5519914d6b9af506548907e1f0e9f9c 146 Pfam PF00989 PAS fold 6 119 1.2E-13 T 22-04-2016 IPR013767 PAS fold GO:0006355 PNUC_RS05185 f5519914d6b9af506548907e1f0e9f9c 146 SUPERFAMILY SSF55785 16 131 3.89E-26 T 22-04-2016 IPR000014 PAS domain PNUC_RS05185 f5519914d6b9af506548907e1f0e9f9c 146 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 130 6.0E-22 T 22-04-2016 IPR000014 PAS domain PNUC_RS05185 f5519914d6b9af506548907e1f0e9f9c 146 Gene3D G3DSA:3.30.450.20 7 119 4.3E-23 T 22-04-2016 PNUC_RS05185 f5519914d6b9af506548907e1f0e9f9c 146 PANTHER PTHR24423 7 143 1.2E-12 T 22-04-2016 PNUC_RS05185 f5519914d6b9af506548907e1f0e9f9c 146 SMART SM00091 5 71 9.6E-12 T 22-04-2016 IPR000014 PAS domain PNUC_RS01705 4ba2bb2bd4e9dad426c3ca4fa4d8004f 428 Gene3D G3DSA:3.50.50.60 3 102 5.1E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS01705 4ba2bb2bd4e9dad426c3ca4fa4d8004f 428 Gene3D G3DSA:3.50.50.60 190 296 5.1E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS01705 4ba2bb2bd4e9dad426c3ca4fa4d8004f 428 PANTHER PTHR10742 3 400 5.5E-39 T 22-04-2016 PNUC_RS01705 4ba2bb2bd4e9dad426c3ca4fa4d8004f 428 Pfam PF01593 Flavin containing amine oxidoreductase 14 357 4.9E-26 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 PNUC_RS01705 4ba2bb2bd4e9dad426c3ca4fa4d8004f 428 SUPERFAMILY SSF51905 392 424 2.04E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS01705 4ba2bb2bd4e9dad426c3ca4fa4d8004f 428 SUPERFAMILY SSF51905 3 293 2.04E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS01705 4ba2bb2bd4e9dad426c3ca4fa4d8004f 428 PRINTS PR00419 Adrenodoxin reductase family signature 27 40 4.9E-8 T 22-04-2016 PNUC_RS01705 4ba2bb2bd4e9dad426c3ca4fa4d8004f 428 PRINTS PR00419 Adrenodoxin reductase family signature 4 26 4.9E-8 T 22-04-2016 PNUC_RS07925 75ea32eeb34cd2ad1edcf737c8e40081 221 PANTHER PTHR30070:SF1 1 221 8.7E-54 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07925 75ea32eeb34cd2ad1edcf737c8e40081 221 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 7 217 1.6E-72 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PNUC_RS07925 75ea32eeb34cd2ad1edcf737c8e40081 221 Pfam PF03379 CcmB protein 5 218 1.1E-71 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07925 75ea32eeb34cd2ad1edcf737c8e40081 221 PANTHER PTHR30070 1 221 8.7E-54 T 22-04-2016 PNUC_RS07925 75ea32eeb34cd2ad1edcf737c8e40081 221 PIRSF PIRSF002764 1 221 5.8E-76 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PNUC_RS07925 75ea32eeb34cd2ad1edcf737c8e40081 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 133 156 1.68E-57 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07925 75ea32eeb34cd2ad1edcf737c8e40081 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 1.68E-57 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07925 75ea32eeb34cd2ad1edcf737c8e40081 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 1.68E-57 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07925 75ea32eeb34cd2ad1edcf737c8e40081 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 1.68E-57 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07925 75ea32eeb34cd2ad1edcf737c8e40081 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 1.68E-57 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07925 75ea32eeb34cd2ad1edcf737c8e40081 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 1.68E-57 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07925 75ea32eeb34cd2ad1edcf737c8e40081 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 156 175 1.68E-57 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS04280 940ae7f443be9b08657437e5baa1ad8c 128 PANTHER PTHR10374 1 127 1.6E-49 T 22-04-2016 PNUC_RS04280 940ae7f443be9b08657437e5baa1ad8c 128 SUPERFAMILY SSF54593 2 128 7.52E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PNUC_RS04280 940ae7f443be9b08657437e5baa1ad8c 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 125 2.2E-21 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PNUC_RS04280 940ae7f443be9b08657437e5baa1ad8c 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PNUC_RS04280 940ae7f443be9b08657437e5baa1ad8c 128 ProSitePatterns PS00935 Glyoxalase I signature 2. 71 83 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PNUC_RS04280 940ae7f443be9b08657437e5baa1ad8c 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 6.5E-58 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PNUC_RS04280 940ae7f443be9b08657437e5baa1ad8c 128 Gene3D G3DSA:3.10.180.10 2 127 1.6E-41 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PNUC_RS09860 966084472492b22a3bf69e69e92ba261 275 Gene3D G3DSA:3.30.1130.10 12 127 1.7E-41 T 22-04-2016 PNUC_RS09860 966084472492b22a3bf69e69e92ba261 275 Pfam PF14489 QueF-like protein 188 264 6.6E-27 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS09860 966084472492b22a3bf69e69e92ba261 275 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 275 142.237 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS09860 966084472492b22a3bf69e69e92ba261 275 PIRSF PIRSF004750 1 275 3.5E-116 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS09860 966084472492b22a3bf69e69e92ba261 275 SUPERFAMILY SSF55620 178 258 6.3E-8 T 22-04-2016 PNUC_RS09860 966084472492b22a3bf69e69e92ba261 275 TIGRFAM TIGR03138 QueF: queuine synthase 3 275 6.5E-116 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS09860 966084472492b22a3bf69e69e92ba261 275 PANTHER PTHR34354:SF1 1 275 2.3E-78 T 22-04-2016 PNUC_RS09860 966084472492b22a3bf69e69e92ba261 275 Gene3D G3DSA:3.30.1130.10 137 274 1.4E-46 T 22-04-2016 PNUC_RS09860 966084472492b22a3bf69e69e92ba261 275 PANTHER PTHR34354 1 275 2.3E-78 T 22-04-2016 PNUC_RS09860 966084472492b22a3bf69e69e92ba261 275 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 12 122 3.8E-47 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS06590 cf75e3577a8743257acba6d2d75747c4 278 SUPERFAMILY SSF53218 13 222 5.76E-33 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS06590 cf75e3577a8743257acba6d2d75747c4 278 Pfam PF00994 Probable molybdopterin binding domain 16 181 3.0E-27 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS06590 cf75e3577a8743257acba6d2d75747c4 278 Gene3D G3DSA:3.40.980.10 145 191 7.2E-29 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS06590 cf75e3577a8743257acba6d2d75747c4 278 Gene3D G3DSA:3.40.980.10 12 110 7.2E-29 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS06590 cf75e3577a8743257acba6d2d75747c4 278 PANTHER PTHR13939 12 231 2.4E-28 T 22-04-2016 PNUC_RS06590 cf75e3577a8743257acba6d2d75747c4 278 SMART SM00852 15 188 1.2E-30 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 Gene3D G3DSA:1.10.8.60 334 407 1.0E-28 T 22-04-2016 PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 PANTHER PTHR23076 5 622 0.0 T 22-04-2016 PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 Pfam PF01434 Peptidase family M41 384 590 3.1E-77 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 SUPERFAMILY SSF52540 150 393 2.29E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 SUPERFAMILY SSF140990 404 601 3.92E-71 T 22-04-2016 PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 Gene3D G3DSA:3.40.50.300 149 333 4.8E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 591 1.9E-233 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 SMART SM00382 186 325 2.8E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 4.4E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 597 36.79 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 Pfam PF06480 FtsH Extracellular 10 78 8.2E-9 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 194 213 7.1E-6 T 22-04-2016 PNUC_RS05295 ee73013a622b110890026df6148ab56a 625 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 611 625 7.1E-6 T 22-04-2016 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 271 2.3E-31 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 415 557 1.7E-10 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 Gene3D G3DSA:3.90.480.10 324 405 2.5E-35 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 Gene3D G3DSA:3.90.480.10 48 117 2.5E-35 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 SUPERFAMILY SSF55124 252 276 1.32E-23 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 SUPERFAMILY SSF55124 318 425 1.32E-23 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 SUPERFAMILY SSF55124 1 126 5.82E-31 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 PANTHER PTHR11493 1 294 8.7E-141 T 22-04-2016 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 PANTHER PTHR11493 330 559 8.7E-141 T 22-04-2016 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 Gene3D G3DSA:3.30.413.10 412 552 2.1E-36 T 22-04-2016 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 PANTHER PTHR11493:SF47 1 294 8.7E-141 T 22-04-2016 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 PANTHER PTHR11493:SF47 330 559 8.7E-141 T 22-04-2016 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 SUPERFAMILY SSF56014 120 282 1.7E-39 T 22-04-2016 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 Gene3D G3DSA:3.30.413.10 120 275 1.1E-31 T 22-04-2016 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 339 402 2.0E-13 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 50 109 2.1E-17 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 PRINTS PR00397 Sirohaem Fe-binding site signature 414 432 6.2E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 PRINTS PR00397 Sirohaem Fe-binding site signature 460 478 6.2E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS01805 c5092b6c488fb0cc614845d60bd08660 570 SUPERFAMILY SSF56014 413 554 6.8E-40 T 22-04-2016 PNUC_RS10400 6b7a7856ae6da138153e951b37b36bf2 197 PANTHER PTHR10108 7 169 2.4E-47 T 22-04-2016 PNUC_RS10400 6b7a7856ae6da138153e951b37b36bf2 197 SUPERFAMILY SSF53335 7 175 8.07E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS10400 6b7a7856ae6da138153e951b37b36bf2 197 Pfam PF07021 Methionine biosynthesis protein MetW 7 194 1.8E-76 T 22-04-2016 IPR010743 Methionine biosynthesis MetW PNUC_RS10400 6b7a7856ae6da138153e951b37b36bf2 197 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 7 194 1.1E-78 T 22-04-2016 IPR010743 Methionine biosynthesis MetW PNUC_RS10400 6b7a7856ae6da138153e951b37b36bf2 197 PANTHER PTHR10108:SF831 7 169 2.4E-47 T 22-04-2016 PNUC_RS10400 6b7a7856ae6da138153e951b37b36bf2 197 Gene3D G3DSA:3.40.50.150 17 171 2.5E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS08335 2e495d66df81bb2bf09e5bdfdcc9b4cd 262 SUPERFAMILY SSF52540 15 247 2.24E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08335 2e495d66df81bb2bf09e5bdfdcc9b4cd 262 PANTHER PTHR24220 17 257 8.8E-147 T 22-04-2016 PNUC_RS08335 2e495d66df81bb2bf09e5bdfdcc9b4cd 262 PANTHER PTHR24220:SF560 17 257 8.8E-147 T 22-04-2016 PNUC_RS08335 2e495d66df81bb2bf09e5bdfdcc9b4cd 262 SMART SM00382 40 250 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS08335 2e495d66df81bb2bf09e5bdfdcc9b4cd 262 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 16 262 1.1E-120 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 PNUC_RS08335 2e495d66df81bb2bf09e5bdfdcc9b4cd 262 Gene3D G3DSA:3.40.50.300 6 253 5.9E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08335 2e495d66df81bb2bf09e5bdfdcc9b4cd 262 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS08335 2e495d66df81bb2bf09e5bdfdcc9b4cd 262 Pfam PF00005 ABC transporter 31 187 4.1E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS10090 2b744dd5144aedef3dc31b256a0524e7 137 PANTHER PTHR12231:SF138 41 137 6.0E-12 T 22-04-2016 PNUC_RS10090 2b744dd5144aedef3dc31b256a0524e7 137 Gene3D G3DSA:3.40.250.10 33 137 2.4E-24 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS10090 2b744dd5144aedef3dc31b256a0524e7 137 PANTHER PTHR12231 41 137 6.0E-12 T 22-04-2016 PNUC_RS10090 2b744dd5144aedef3dc31b256a0524e7 137 Pfam PF00581 Rhodanese-like domain 45 130 7.9E-14 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS10090 2b744dd5144aedef3dc31b256a0524e7 137 SUPERFAMILY SSF52821 17 137 7.99E-26 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS10090 2b744dd5144aedef3dc31b256a0524e7 137 SMART SM00450 37 134 5.8E-15 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS07940 e019c72cc5b24aaf390e6635312c79be 191 PANTHER PTHR34406 16 188 1.2E-28 T 22-04-2016 PNUC_RS07940 e019c72cc5b24aaf390e6635312c79be 191 Gene3D G3DSA:2.40.128.110 31 189 1.1E-34 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PNUC_RS07940 e019c72cc5b24aaf390e6635312c79be 191 Pfam PF04264 YceI-like domain 32 185 3.5E-27 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PNUC_RS07940 e019c72cc5b24aaf390e6635312c79be 191 PANTHER PTHR34406:SF1 16 188 1.2E-28 T 22-04-2016 PNUC_RS07940 e019c72cc5b24aaf390e6635312c79be 191 SMART SM00867 28 189 5.0E-35 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PNUC_RS07940 e019c72cc5b24aaf390e6635312c79be 191 SUPERFAMILY SSF101874 32 190 1.57E-36 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PNUC_RS01615 44343477bf88db301b2639b721e99e81 302 Gene3D G3DSA:3.90.550.10 6 176 3.9E-7 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS01615 44343477bf88db301b2639b721e99e81 302 SUPERFAMILY SSF53448 8 270 1.56E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 Gene3D G3DSA:3.90.600.10 333 424 6.1E-34 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 SUPERFAMILY SSF56059 106 328 8.84E-64 T 22-04-2016 PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 333 422 2.4E-28 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 SMART SM01210 332 424 3.4E-51 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 105 298 1.3E-78 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 104 1.7E-36 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 Gene3D G3DSA:3.30.1490.20 123 192 3.4E-33 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 SMART SM01209 105 298 1.5E-136 T 22-04-2016 PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 PANTHER PTHR10520 1 425 2.2E-262 T 22-04-2016 PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 42.764 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 7.7E-172 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 Gene3D G3DSA:3.40.50.20 2 97 1.8E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 SUPERFAMILY SSF51246 331 424 8.89E-31 T 22-04-2016 IPR011054 Rudiment single hybrid motif PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 Gene3D G3DSA:3.30.470.20 193 330 2.5E-60 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS03220 9408243381d143eea332a8ef8b90d4a1 425 SUPERFAMILY SSF52440 1 105 1.4E-34 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS09105 78c0af8c1d5f7a524af7c2707f640dcc 101 Pfam PF06865 Protein of unknown function (DUF1255) 10 100 3.4E-27 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 PNUC_RS09105 78c0af8c1d5f7a524af7c2707f640dcc 101 Gene3D G3DSA:2.60.120.10 10 100 4.0E-26 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS09105 78c0af8c1d5f7a524af7c2707f640dcc 101 PANTHER PTHR36540 1 101 2.9E-15 T 22-04-2016 PNUC_RS09105 78c0af8c1d5f7a524af7c2707f640dcc 101 SUPERFAMILY SSF51182 10 100 3.03E-24 T 22-04-2016 IPR011051 RmlC-like cupin domain PNUC_RS09105 78c0af8c1d5f7a524af7c2707f640dcc 101 PANTHER PTHR36540:SF1 1 101 2.9E-15 T 22-04-2016 PNUC_RS05640 ad3275961c51bbbc4338ce2fae707be8 246 Pfam PF01138 3' exoribonuclease family, domain 1 19 149 2.1E-20 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 PNUC_RS05640 ad3275961c51bbbc4338ce2fae707be8 246 SUPERFAMILY SSF54211 10 190 1.77E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS05640 ad3275961c51bbbc4338ce2fae707be8 246 Hamap MF_00564 Ribonuclease PH [rph]. 10 246 48.692 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 PNUC_RS05640 ad3275961c51bbbc4338ce2fae707be8 246 ProSitePatterns PS01277 Ribonuclease PH signature. 125 137 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site PNUC_RS05640 ad3275961c51bbbc4338ce2fae707be8 246 PANTHER PTHR11953:SF0 8 246 2.0E-78 T 22-04-2016 PNUC_RS05640 ad3275961c51bbbc4338ce2fae707be8 246 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 11 245 4.4E-117 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 PNUC_RS05640 ad3275961c51bbbc4338ce2fae707be8 246 Gene3D G3DSA:3.30.230.70 14 243 1.3E-29 T 22-04-2016 IPR027408 PNPase/RNase PH domain PNUC_RS05640 ad3275961c51bbbc4338ce2fae707be8 246 PANTHER PTHR11953 8 246 2.0E-78 T 22-04-2016 PNUC_RS05640 ad3275961c51bbbc4338ce2fae707be8 246 SUPERFAMILY SSF55666 163 243 1.23E-24 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PNUC_RS05640 ad3275961c51bbbc4338ce2fae707be8 246 Pfam PF03725 3' exoribonuclease family, domain 2 167 232 1.9E-9 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PNUC_RS03360 a83051668af4e8b59801ff22271acd21 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 82 7.5E-9 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PNUC_RS03360 a83051668af4e8b59801ff22271acd21 283 PANTHER PTHR21299 1 283 1.3E-108 T 22-04-2016 PNUC_RS03360 a83051668af4e8b59801ff22271acd21 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 281 8.4E-95 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PNUC_RS03360 a83051668af4e8b59801ff22271acd21 283 Gene3D G3DSA:3.40.50.620 1 169 2.7E-71 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS03360 a83051668af4e8b59801ff22271acd21 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 283 37.528 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PNUC_RS03360 a83051668af4e8b59801ff22271acd21 283 SUPERFAMILY SSF52374 1 283 1.06E-93 T 22-04-2016 PNUC_RS03360 a83051668af4e8b59801ff22271acd21 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 282 2.6E-87 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PNUC_RS03360 a83051668af4e8b59801ff22271acd21 283 Gene3D G3DSA:3.30.1300.10 172 283 5.5E-26 T 22-04-2016 PNUC_RS03360 a83051668af4e8b59801ff22271acd21 283 PANTHER PTHR21299:SF1 1 283 1.3E-108 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PNUC_RS01755 c909fd9833981562de6417b799873b9c 476 Pfam PF00535 Glycosyl transferase family 2 242 370 7.6E-18 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PNUC_RS01755 c909fd9833981562de6417b799873b9c 476 SUPERFAMILY SSF53335 16 197 1.59E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01755 c909fd9833981562de6417b799873b9c 476 SUPERFAMILY SSF53448 241 475 1.65E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS01755 c909fd9833981562de6417b799873b9c 476 Gene3D G3DSA:3.90.550.10 236 363 3.0E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS01755 c909fd9833981562de6417b799873b9c 476 Gene3D G3DSA:3.40.50.150 17 188 2.8E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01755 c909fd9833981562de6417b799873b9c 476 Pfam PF13489 Methyltransferase domain 34 187 5.0E-13 T 22-04-2016 PNUC_RS01755 c909fd9833981562de6417b799873b9c 476 PANTHER PTHR10859 223 469 5.3E-43 T 22-04-2016 PNUC_RS03165 24698c719aaa0eda4fa02c9e8092a6b9 1204 Gene3D G3DSA:2.40.50.140 1007 1098 2.8E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS03165 24698c719aaa0eda4fa02c9e8092a6b9 1204 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 305 744 2.5E-173 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS03165 24698c719aaa0eda4fa02c9e8092a6b9 1204 Pfam PF14579 Helix-hairpin-helix motif 820 912 2.4E-24 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS03165 24698c719aaa0eda4fa02c9e8092a6b9 1204 Pfam PF02811 PHP domain 8 185 3.7E-40 T 22-04-2016 IPR004013 PHP domain GO:0003824 PNUC_RS03165 24698c719aaa0eda4fa02c9e8092a6b9 1204 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1054 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS03165 24698c719aaa0eda4fa02c9e8092a6b9 1204 SUPERFAMILY SSF89550 6 276 2.16E-11 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PNUC_RS03165 24698c719aaa0eda4fa02c9e8092a6b9 1204 SMART SM00481 7 74 1.3E-20 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 PNUC_RS03165 24698c719aaa0eda4fa02c9e8092a6b9 1204 Gene3D G3DSA:3.20.20.140 6 269 1.3E-21 T 22-04-2016 PNUC_RS03165 24698c719aaa0eda4fa02c9e8092a6b9 1204 Gene3D G3DSA:1.10.150.280 854 891 1.6E-5 T 22-04-2016 PNUC_RS03165 24698c719aaa0eda4fa02c9e8092a6b9 1204 PANTHER PTHR32294:SF0 2 1204 0.0 T 22-04-2016 PNUC_RS03165 24698c719aaa0eda4fa02c9e8092a6b9 1204 PANTHER PTHR32294 2 1204 0.0 T 22-04-2016 PNUC_RS08510 bf0ec3c319416399b1e61f635f483595 433 PANTHER PTHR11662:SF3 13 424 2.7E-149 T 22-04-2016 PNUC_RS08510 bf0ec3c319416399b1e61f635f483595 433 PANTHER PTHR11662 13 424 2.7E-149 T 22-04-2016 PNUC_RS08510 bf0ec3c319416399b1e61f635f483595 433 Gene3D G3DSA:1.20.1250.20 245 426 2.6E-17 T 22-04-2016 PNUC_RS08510 bf0ec3c319416399b1e61f635f483595 433 Pfam PF07690 Major Facilitator Superfamily 28 392 9.5E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS08510 bf0ec3c319416399b1e61f635f483595 433 Gene3D G3DSA:1.20.1250.20 19 220 2.4E-42 T 22-04-2016 PNUC_RS08510 bf0ec3c319416399b1e61f635f483595 433 SUPERFAMILY SSF103473 13 427 4.71E-81 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS10215 79221084ac258e3de7bb7415c329901b 261 PANTHER PTHR33973 1 255 7.1E-46 T 22-04-2016 PNUC_RS10215 79221084ac258e3de7bb7415c329901b 261 Pfam PF07103 Protein of unknown function (DUF1365) 8 254 1.2E-66 T 22-04-2016 IPR010775 Protein of unknown function DUF1365 PNUC_RS08645 02acd021e996f2ea649ad08691ffa891 378 Pfam PF00155 Aminotransferase class I and II 33 371 1.0E-36 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PNUC_RS08645 02acd021e996f2ea649ad08691ffa891 378 PANTHER PTHR11751 4 376 1.7E-93 T 22-04-2016 PNUC_RS08645 02acd021e996f2ea649ad08691ffa891 378 Gene3D G3DSA:3.40.640.10 40 247 5.8E-47 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS08645 02acd021e996f2ea649ad08691ffa891 378 SUPERFAMILY SSF53383 1 377 2.2E-83 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS08645 02acd021e996f2ea649ad08691ffa891 378 Gene3D G3DSA:3.90.1150.10 248 377 1.5E-30 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS08645 02acd021e996f2ea649ad08691ffa891 378 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 377 8.0E-111 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 PNUC_RS08645 02acd021e996f2ea649ad08691ffa891 378 PANTHER PTHR11751:SF21 4 376 1.7E-93 T 22-04-2016 PNUC_RS10475 b840070a6868fcdc6fd5a1a7dfb4c078 383 PANTHER PTHR30474:SF1 1 382 8.4E-137 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 PNUC_RS10475 b840070a6868fcdc6fd5a1a7dfb4c078 383 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 24 378 1.2E-124 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 PNUC_RS10475 b840070a6868fcdc6fd5a1a7dfb4c078 383 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 336 360 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 PNUC_RS10475 b840070a6868fcdc6fd5a1a7dfb4c078 383 Pfam PF01098 Cell cycle protein 31 379 1.4E-99 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PNUC_RS10475 b840070a6868fcdc6fd5a1a7dfb4c078 383 PANTHER PTHR30474 1 382 8.4E-137 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PNUC_RS01535 f076a6bbb8545b9b380e57f71be14632 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 94 8.7E-15 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PNUC_RS01535 f076a6bbb8545b9b380e57f71be14632 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 304 1.1E-105 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 PNUC_RS01535 f076a6bbb8545b9b380e57f71be14632 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 11 305 29.305 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD PNUC_RS01535 f076a6bbb8545b9b380e57f71be14632 305 Gene3D G3DSA:1.10.443.10 118 296 1.3E-55 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS01535 f076a6bbb8545b9b380e57f71be14632 305 PANTHER PTHR30349 12 304 6.7E-102 T 22-04-2016 PNUC_RS01535 f076a6bbb8545b9b380e57f71be14632 305 Gene3D G3DSA:1.10.150.130 12 104 1.9E-21 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal PNUC_RS01535 f076a6bbb8545b9b380e57f71be14632 305 Pfam PF00589 Phage integrase family 118 290 1.9E-48 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS01535 f076a6bbb8545b9b380e57f71be14632 305 SUPERFAMILY SSF56349 115 303 2.5E-56 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PNUC_RS01535 f076a6bbb8545b9b380e57f71be14632 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 56.527 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 PNUC_RS01535 f076a6bbb8545b9b380e57f71be14632 305 SUPERFAMILY SSF47823 12 104 2.35E-27 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal PNUC_RS01535 f076a6bbb8545b9b380e57f71be14632 305 PANTHER PTHR30349:SF5 12 304 6.7E-102 T 22-04-2016 PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 Gene3D G3DSA:3.40.50.261 279 434 7.0E-20 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 Pfam PF13549 ATP-grasp domain 472 693 7.0E-77 T 22-04-2016 PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 SUPERFAMILY SSF56059 480 694 2.36E-37 T 22-04-2016 PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 PANTHER PTHR11117 68 698 2.0E-221 T 22-04-2016 PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 Gene3D G3DSA:3.30.470.20 485 590 6.8E-6 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 145 282 3.5E-49 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 Pfam PF00583 Acetyltransferase (GNAT) family 803 877 2.3E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 SUPERFAMILY SSF52210 125 283 1.19E-35 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 SUPERFAMILY SSF55729 727 886 2.92E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 Gene3D G3DSA:3.40.50.720 67 125 2.4E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 SUPERFAMILY SSF52210 288 444 3.53E-35 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 Gene3D G3DSA:3.40.630.30 725 888 5.1E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 Gene3D G3DSA:3.40.50.261 126 278 7.2E-28 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS02815 963c40b44257ea4d031f8a78b2e29495 895 PANTHER PTHR11117:SF8 68 698 2.0E-221 T 22-04-2016 PNUC_RS04300 fba50a92fe87e38e8f744d397c356e31 601 SUPERFAMILY SSF161111 20 214 6.67E-52 T 22-04-2016 PNUC_RS04300 fba50a92fe87e38e8f744d397c356e31 601 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 292 3.4E-79 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PNUC_RS04300 fba50a92fe87e38e8f744d397c356e31 601 Gene3D G3DSA:1.20.1510.10 19 213 6.0E-54 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain PNUC_RS04300 fba50a92fe87e38e8f744d397c356e31 601 Gene3D G3DSA:3.40.50.1820 332 600 9.3E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS04300 fba50a92fe87e38e8f744d397c356e31 601 PANTHER PTHR11562 23 299 3.3E-94 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PNUC_RS04300 fba50a92fe87e38e8f744d397c356e31 601 SUPERFAMILY SSF160240 226 291 2.62E-6 T 22-04-2016 PNUC_RS04300 fba50a92fe87e38e8f744d397c356e31 601 Pfam PF12697 Alpha/beta hydrolase family 349 594 1.5E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS04300 fba50a92fe87e38e8f744d397c356e31 601 Pfam PF01545 Cation efflux family 24 212 6.2E-43 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PNUC_RS04300 fba50a92fe87e38e8f744d397c356e31 601 SUPERFAMILY SSF53474 318 594 4.29E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 Gene3D G3DSA:3.40.50.300 56 271 6.7E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 SUPERFAMILY SSF52540 64 284 2.33E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 Pfam PF13481 AAA domain 77 218 1.4E-15 T 22-04-2016 PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 SUPERFAMILY SSF54211 299 450 1.63E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 SUPERFAMILY SSF54211 251 265 1.63E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 Gene3D G3DSA:3.30.230.10 280 450 1.2E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 SMART SM00382 86 240 2.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 358 450 2.0E-5 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 PANTHER PTHR32472 2 447 3.8E-198 T 22-04-2016 PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 447 7.3E-192 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 PRINTS PR01874 DNA repair protein radA signature 318 341 2.2E-92 T 22-04-2016 PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 PRINTS PR01874 DNA repair protein radA signature 170 194 2.2E-92 T 22-04-2016 PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 PRINTS PR01874 DNA repair protein radA signature 10 34 2.2E-92 T 22-04-2016 PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 PRINTS PR01874 DNA repair protein radA signature 78 106 2.2E-92 T 22-04-2016 PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 PRINTS PR01874 DNA repair protein radA signature 209 237 2.2E-92 T 22-04-2016 PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 PRINTS PR01874 DNA repair protein radA signature 120 137 2.2E-92 T 22-04-2016 PNUC_RS07640 2d242e0071dd71dda632022dd1d88fa8 454 PRINTS PR01874 DNA repair protein radA signature 244 270 2.2E-92 T 22-04-2016 PNUC_RS10645 0a53357bfda88a105cdb1891ac3757ae 194 Gene3D G3DSA:3.40.470.10 4 193 1.8E-46 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PNUC_RS10645 0a53357bfda88a105cdb1891ac3757ae 194 Pfam PF03167 Uracil DNA glycosylase superfamily 34 185 5.0E-26 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PNUC_RS10645 0a53357bfda88a105cdb1891ac3757ae 194 PANTHER PTHR42160:SF1 1 194 2.0E-89 T 22-04-2016 PNUC_RS10645 0a53357bfda88a105cdb1891ac3757ae 194 PANTHER PTHR42160 1 194 2.0E-89 T 22-04-2016 PNUC_RS10645 0a53357bfda88a105cdb1891ac3757ae 194 SUPERFAMILY SSF52141 5 193 4.25E-59 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PNUC_RS10645 0a53357bfda88a105cdb1891ac3757ae 194 SMART SM00986 29 186 2.9E-34 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PNUC_RS10645 0a53357bfda88a105cdb1891ac3757ae 194 SMART SM00987 29 186 2.9E-34 T 22-04-2016 PNUC_RS03930 922a29917f8c67f486865945cbf4f5f0 258 PANTHER PTHR30283:SF3 2 254 1.0E-102 T 22-04-2016 PNUC_RS03930 922a29917f8c67f486865945cbf4f5f0 258 PANTHER PTHR30283 2 254 1.0E-102 T 22-04-2016 PNUC_RS03930 922a29917f8c67f486865945cbf4f5f0 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 35.318 T 22-04-2016 IPR005583 Peroxide stress protein YaaA PNUC_RS03930 922a29917f8c67f486865945cbf4f5f0 258 Pfam PF03883 Protein of unknown function (DUF328) 1 241 1.7E-87 T 22-04-2016 IPR005583 Peroxide stress protein YaaA PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 PRINTS PR00147 DNA photolyase signature 393 407 3.8E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 PRINTS PR00147 DNA photolyase signature 354 372 3.8E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 PRINTS PR00147 DNA photolyase signature 149 165 3.8E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 PRINTS PR00147 DNA photolyase signature 334 350 3.8E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 SUPERFAMILY SSF52425 4 190 9.55E-53 T 22-04-2016 IPR006050 DNA photolyase, N-terminal PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 SUPERFAMILY SSF48173 211 489 2.35E-102 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 Pfam PF00875 DNA photolyase 5 170 4.3E-51 T 22-04-2016 IPR006050 DNA photolyase, N-terminal PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 354 373 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 Gene3D G3DSA:3.40.50.620 3 153 2.1E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 PANTHER PTHR11455 1 492 1.5E-187 T 22-04-2016 PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 Pfam PF03441 FAD binding domain of DNA photolyase 281 483 4.1E-82 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 PANTHER PTHR11455:SF18 1 492 1.5E-187 T 22-04-2016 PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 Gene3D G3DSA:1.10.579.10 292 487 9.7E-77 T 22-04-2016 PNUC_RS01280 a6353958be57f874d750cbbe360587c5 492 Gene3D G3DSA:1.25.40.80 154 291 2.3E-27 T 22-04-2016 PNUC_RS09110 cab31d7df72d0e23a5e0607bfb7f0ba0 410 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS09110 cab31d7df72d0e23a5e0607bfb7f0ba0 410 Gene3D G3DSA:3.40.50.620 5 163 8.0E-66 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS09110 cab31d7df72d0e23a5e0607bfb7f0ba0 410 SUPERFAMILY SSF69864 180 404 1.7E-93 T 22-04-2016 PNUC_RS09110 cab31d7df72d0e23a5e0607bfb7f0ba0 410 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 120 131 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS09110 cab31d7df72d0e23a5e0607bfb7f0ba0 410 PANTHER PTHR11587:SF2 1 410 1.9E-234 T 22-04-2016 PNUC_RS09110 cab31d7df72d0e23a5e0607bfb7f0ba0 410 PANTHER PTHR11587 1 410 1.9E-234 T 22-04-2016 PNUC_RS09110 cab31d7df72d0e23a5e0607bfb7f0ba0 410 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 402 6.6E-142 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS09110 cab31d7df72d0e23a5e0607bfb7f0ba0 410 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 405 52.04 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS09110 cab31d7df72d0e23a5e0607bfb7f0ba0 410 Gene3D G3DSA:1.20.5.470 372 400 9.8E-7 T 22-04-2016 PNUC_RS09110 cab31d7df72d0e23a5e0607bfb7f0ba0 410 Pfam PF00764 Arginosuccinate synthase 8 400 3.1E-153 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS09110 cab31d7df72d0e23a5e0607bfb7f0ba0 410 Gene3D G3DSA:3.90.1260.10 164 362 4.4E-95 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS09110 cab31d7df72d0e23a5e0607bfb7f0ba0 410 SUPERFAMILY SSF52402 5 174 3.97E-46 T 22-04-2016 PNUC_RS05305 964304deeb898d2d733d6afa0377bb26 208 Pfam PF01985 CRS1 / YhbY (CRM) domain 7 89 1.8E-15 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PNUC_RS05305 964304deeb898d2d733d6afa0377bb26 208 Gene3D G3DSA:3.30.110.60 5 92 1.5E-26 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PNUC_RS05305 964304deeb898d2d733d6afa0377bb26 208 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 14 91 9.0E-26 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PNUC_RS05305 964304deeb898d2d733d6afa0377bb26 208 PANTHER PTHR31846 4 87 6.3E-14 T 22-04-2016 PNUC_RS05305 964304deeb898d2d733d6afa0377bb26 208 SUPERFAMILY SSF75471 5 95 4.05E-25 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PNUC_RS05305 964304deeb898d2d733d6afa0377bb26 208 SMART SM01103 6 89 7.5E-39 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PNUC_RS08415 e14bbcf7f44f5a25b4eaa9b2664c9d58 494 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 3 490 1.8E-224 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PNUC_RS08415 e14bbcf7f44f5a25b4eaa9b2664c9d58 494 PANTHER PTHR13847:SF214 3 445 1.3E-178 T 22-04-2016 PNUC_RS08415 e14bbcf7f44f5a25b4eaa9b2664c9d58 494 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 4 487 9.1E-207 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PNUC_RS08415 e14bbcf7f44f5a25b4eaa9b2664c9d58 494 PANTHER PTHR13847 3 445 1.3E-178 T 22-04-2016 PNUC_RS08415 e14bbcf7f44f5a25b4eaa9b2664c9d58 494 Gene3D G3DSA:3.50.50.60 145 330 3.5E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08415 e14bbcf7f44f5a25b4eaa9b2664c9d58 494 Gene3D G3DSA:3.50.50.60 1 70 3.5E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08415 e14bbcf7f44f5a25b4eaa9b2664c9d58 494 SUPERFAMILY SSF51905 1 271 7.22E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08415 e14bbcf7f44f5a25b4eaa9b2664c9d58 494 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 1 490 47.658 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PNUC_RS00360 0d003ebd643fe46f18d7eea3c2f0c150 89 PRINTS PR00973 Ribosomal protein S17 family signature 60 70 6.3E-10 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00360 0d003ebd643fe46f18d7eea3c2f0c150 89 PRINTS PR00973 Ribosomal protein S17 family signature 70 77 6.3E-10 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00360 0d003ebd643fe46f18d7eea3c2f0c150 89 PRINTS PR00973 Ribosomal protein S17 family signature 28 51 6.3E-10 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00360 0d003ebd643fe46f18d7eea3c2f0c150 89 PANTHER PTHR10744 9 85 3.6E-30 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00360 0d003ebd643fe46f18d7eea3c2f0c150 89 Gene3D G3DSA:2.40.50.140 9 86 6.0E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS00360 0d003ebd643fe46f18d7eea3c2f0c150 89 ProSitePatterns PS00056 Ribosomal protein S17 signature. 60 72 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00360 0d003ebd643fe46f18d7eea3c2f0c150 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 5.2E-33 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00360 0d003ebd643fe46f18d7eea3c2f0c150 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 85 23.743 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00360 0d003ebd643fe46f18d7eea3c2f0c150 89 SUPERFAMILY SSF50249 9 85 3.77E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS00360 0d003ebd643fe46f18d7eea3c2f0c150 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 4.0E-26 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00360 0d003ebd643fe46f18d7eea3c2f0c150 89 Pfam PF00366 Ribosomal protein S17 14 80 8.4E-30 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS08075 9515ac1bb031b7fa0cd8151a59b822f4 289 SUPERFAMILY SSF103481 182 279 1.7E-6 T 22-04-2016 PNUC_RS08075 9515ac1bb031b7fa0cd8151a59b822f4 289 Pfam PF00892 EamA-like transporter family 3 135 1.0E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PNUC_RS08075 9515ac1bb031b7fa0cd8151a59b822f4 289 SUPERFAMILY SSF103481 39 139 2.09E-12 T 22-04-2016 PNUC_RS08075 9515ac1bb031b7fa0cd8151a59b822f4 289 PANTHER PTHR22911 5 279 1.0E-51 T 22-04-2016 PNUC_RS08075 9515ac1bb031b7fa0cd8151a59b822f4 289 PANTHER PTHR22911:SF70 5 279 1.0E-51 T 22-04-2016 PNUC_RS08010 4039313b10f6e365b86993e3eb296491 187 PANTHER PTHR10681 1 187 2.5E-85 T 22-04-2016 PNUC_RS08010 4039313b10f6e365b86993e3eb296491 187 PIRSF PIRSF000239 1 187 1.6E-44 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PNUC_RS08010 4039313b10f6e365b86993e3eb296491 187 PANTHER PTHR10681:SF121 1 187 2.5E-85 T 22-04-2016 PNUC_RS08010 4039313b10f6e365b86993e3eb296491 187 SUPERFAMILY SSF52833 2 186 2.69E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS08010 4039313b10f6e365b86993e3eb296491 187 Pfam PF00578 AhpC/TSA family 9 132 1.5E-28 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PNUC_RS08010 4039313b10f6e365b86993e3eb296491 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 9.6E-6 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PNUC_RS08010 4039313b10f6e365b86993e3eb296491 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 2.3E-95 T 22-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PNUC_RS08010 4039313b10f6e365b86993e3eb296491 187 Gene3D G3DSA:3.40.30.10 5 183 3.2E-57 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS03330 b021603ffa17b1c1e9c0364933d80610 416 PANTHER PTHR24023:SF593 255 403 2.3E-28 T 22-04-2016 PNUC_RS03330 b021603ffa17b1c1e9c0364933d80610 416 PANTHER PTHR24023:SF593 43 213 2.3E-28 T 22-04-2016 PNUC_RS03330 b021603ffa17b1c1e9c0364933d80610 416 SUPERFAMILY SSF89796 1 416 1.57E-122 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS03330 b021603ffa17b1c1e9c0364933d80610 416 Gene3D G3DSA:3.30.1540.10 246 326 7.9E-27 T 22-04-2016 PNUC_RS03330 b021603ffa17b1c1e9c0364933d80610 416 Gene3D G3DSA:3.40.50.10540 2 216 1.1E-104 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS03330 b021603ffa17b1c1e9c0364933d80610 416 Gene3D G3DSA:3.40.50.10540 327 416 1.1E-104 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS03330 b021603ffa17b1c1e9c0364933d80610 416 Pfam PF02515 CoA-transferase family III 5 393 1.0E-91 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 PNUC_RS03330 b021603ffa17b1c1e9c0364933d80610 416 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 2 416 1.9E-219 T 22-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 PNUC_RS03330 b021603ffa17b1c1e9c0364933d80610 416 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 416 63.442 T 22-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 PNUC_RS03330 b021603ffa17b1c1e9c0364933d80610 416 PANTHER PTHR24023 255 403 2.3E-28 T 22-04-2016 PNUC_RS03330 b021603ffa17b1c1e9c0364933d80610 416 PANTHER PTHR24023 43 213 2.3E-28 T 22-04-2016 PNUC_RS00835 80eff4e57aa42c04bedc4ebebb3aefa8 238 PANTHER PTHR21343 4 211 4.9E-71 T 22-04-2016 PNUC_RS00835 80eff4e57aa42c04bedc4ebebb3aefa8 238 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 4 213 29.175 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 PNUC_RS00835 80eff4e57aa42c04bedc4ebebb3aefa8 238 PANTHER PTHR21343:SF13 4 211 4.9E-71 T 22-04-2016 PNUC_RS00835 80eff4e57aa42c04bedc4ebebb3aefa8 238 Pfam PF13500 AAA domain 6 212 2.2E-38 T 22-04-2016 PNUC_RS00835 80eff4e57aa42c04bedc4ebebb3aefa8 238 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 8 179 8.4E-46 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 PNUC_RS00835 80eff4e57aa42c04bedc4ebebb3aefa8 238 SUPERFAMILY SSF52540 6 212 2.07E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00835 80eff4e57aa42c04bedc4ebebb3aefa8 238 Gene3D G3DSA:3.40.50.300 5 212 5.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00835 80eff4e57aa42c04bedc4ebebb3aefa8 238 PIRSF PIRSF006755 3 234 2.1E-69 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 PNUC_RS00860 6a90f08210632606e4a6d5aa05d05666 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 49.344 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PNUC_RS00860 6a90f08210632606e4a6d5aa05d05666 142 Pfam PF02381 MraZ protein, putative antitoxin-like 73 128 6.5E-15 T 22-04-2016 IPR020603 MraZ domain PNUC_RS00860 6a90f08210632606e4a6d5aa05d05666 142 Pfam PF02381 MraZ protein, putative antitoxin-like 2 67 9.9E-14 T 22-04-2016 IPR020603 MraZ domain PNUC_RS00860 6a90f08210632606e4a6d5aa05d05666 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 121 3.0E-55 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PNUC_RS00860 6a90f08210632606e4a6d5aa05d05666 142 PANTHER PTHR34701 2 132 2.2E-41 T 22-04-2016 PNUC_RS00860 6a90f08210632606e4a6d5aa05d05666 142 SUPERFAMILY SSF89447 2 129 2.79E-38 T 22-04-2016 PNUC_RS00860 6a90f08210632606e4a6d5aa05d05666 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 140 1.8E-33 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PNUC_RS10420 adca9bc3d50df7541ae8c1cbffa4733b 125 PANTHER PTHR33823 3 121 2.9E-35 T 22-04-2016 PNUC_RS10420 adca9bc3d50df7541ae8c1cbffa4733b 125 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 84 117 6.9E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PNUC_RS10420 adca9bc3d50df7541ae8c1cbffa4733b 125 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 88 112 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PNUC_RS10420 adca9bc3d50df7541ae8c1cbffa4733b 125 SUPERFAMILY SSF57716 85 123 3.14E-8 T 22-04-2016 PNUC_RS10420 adca9bc3d50df7541ae8c1cbffa4733b 125 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 3 124 27.448 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PNUC_RS10420 adca9bc3d50df7541ae8c1cbffa4733b 125 PANTHER PTHR33823:SF2 3 121 2.9E-35 T 22-04-2016 PNUC_RS10420 adca9bc3d50df7541ae8c1cbffa4733b 125 SUPERFAMILY SSF109635 2 83 3.79E-28 T 22-04-2016 PNUC_RS10420 adca9bc3d50df7541ae8c1cbffa4733b 125 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 7 115 5.8E-43 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PNUC_RS00085 1bc3da650effbc403d703c1f55b34045 256 PANTHER PTHR13696 1 256 5.0E-83 T 22-04-2016 PNUC_RS00085 1bc3da650effbc403d703c1f55b34045 256 SUPERFAMILY SSF52540 1 254 1.14E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00085 1bc3da650effbc403d703c1f55b34045 256 PANTHER PTHR13696:SF52 1 256 5.0E-83 T 22-04-2016 PNUC_RS00085 1bc3da650effbc403d703c1f55b34045 256 Pfam PF13614 AAA domain 3 177 4.7E-64 T 22-04-2016 IPR025669 AAA domain PNUC_RS00085 1bc3da650effbc403d703c1f55b34045 256 Gene3D G3DSA:3.40.50.300 3 255 1.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 SUPERFAMILY SSF50249 325 407 3.26E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 18 668 1.4E-255 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Gene3D G3DSA:1.10.150.20 511 591 1.0E-33 T 22-04-2016 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Gene3D G3DSA:3.30.470.30 125 259 8.7E-51 T 22-04-2016 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Pfam PF12826 Helix-hairpin-helix motif 517 580 4.3E-26 T 22-04-2016 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Gene3D G3DSA:3.40.50.10190 601 673 8.2E-26 T 22-04-2016 IPR001357 BRCT domain PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Hamap MF_01588 DNA ligase [ligA]. 9 672 54.061 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 PANTHER PTHR23389:SF9 1 539 1.5E-192 T 22-04-2016 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 SMART SM00292 598 673 4.4E-13 T 22-04-2016 IPR001357 BRCT domain PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 SUPERFAMILY SSF47781 410 590 1.52E-62 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Gene3D G3DSA:1.10.150.20 442 510 3.7E-29 T 22-04-2016 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 SUPERFAMILY SSF56091 8 323 5.58E-114 T 22-04-2016 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 PANTHER PTHR23389 1 539 1.5E-192 T 22-04-2016 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 SMART SM00532 10 455 3.0E-254 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 SMART SM00278 519 538 110.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 SMART SM00278 487 506 42.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 SMART SM00278 551 570 18.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 SMART SM00278 453 472 140.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 13 325 2.7E-119 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 603 672 3.6E-15 T 22-04-2016 IPR001357 BRCT domain PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 SUPERFAMILY SSF52113 601 673 1.05E-19 T 22-04-2016 IPR001357 BRCT domain PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Pfam PF14520 Helix-hairpin-helix domain 455 507 3.9E-6 T 22-04-2016 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 329 405 3.9E-35 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Gene3D G3DSA:2.40.50.140 326 398 4.1E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Gene3D G3DSA:1.10.287.610 5 74 2.2E-22 T 22-04-2016 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 338 353 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 414 441 9.1E-9 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 121 150 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site PNUC_RS07610 6952f28295476965396302c7b72fb47b 673 PIRSF PIRSF001604 3 673 2.1E-248 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 335 351 9.8E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 14 27 9.8E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 411 430 9.8E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 59 71 9.8E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 263 278 9.8E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 10 711 4.8E-193 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 SUPERFAMILY SSF47323 607 704 6.98E-5 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 SMART SM00836 600 702 0.0069 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 13 560 1.6E-191 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 Gene3D G3DSA:1.10.730.10 605 703 1.6E-8 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 Gene3D G3DSA:1.10.3210.10 377 483 3.6E-5 T 22-04-2016 IPR006674 HD domain PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 10 711 23.382 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 Pfam PF05746 DALR anticodon binding domain 605 703 4.3E-12 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 PANTHER PTHR30075 11 712 1.1E-246 T 22-04-2016 PNUC_RS09670 ea756eea6b42fcb2d30e088a90d4c8a5 712 SUPERFAMILY SSF109604 368 507 1.2E-16 T 22-04-2016 PNUC_RS04130 b3cc16e09a3de414eb74b8b99c8af05e 105 SMART SM00418 22 100 1.5E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PNUC_RS04130 b3cc16e09a3de414eb74b8b99c8af05e 105 PANTHER PTHR33154 4 105 4.9E-22 T 22-04-2016 PNUC_RS04130 b3cc16e09a3de414eb74b8b99c8af05e 105 Pfam PF01022 Bacterial regulatory protein, arsR family 32 74 7.2E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PNUC_RS04130 b3cc16e09a3de414eb74b8b99c8af05e 105 PANTHER PTHR33154:SF9 4 105 4.9E-22 T 22-04-2016 PNUC_RS04130 b3cc16e09a3de414eb74b8b99c8af05e 105 Gene3D G3DSA:1.10.10.10 10 104 1.5E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS04130 b3cc16e09a3de414eb74b8b99c8af05e 105 SUPERFAMILY SSF46785 16 103 2.73E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS04130 b3cc16e09a3de414eb74b8b99c8af05e 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 4.41E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PNUC_RS04130 b3cc16e09a3de414eb74b8b99c8af05e 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 54 4.41E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PNUC_RS04130 b3cc16e09a3de414eb74b8b99c8af05e 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 4.41E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PNUC_RS04130 b3cc16e09a3de414eb74b8b99c8af05e 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 4.41E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PNUC_RS02550 693b972253b69a7505a2a396a8fcc581 389 PANTHER PTHR18895 213 384 4.1E-18 T 22-04-2016 PNUC_RS02550 693b972253b69a7505a2a396a8fcc581 389 Pfam PF05175 Methyltransferase small domain 176 284 3.2E-13 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 PNUC_RS02550 693b972253b69a7505a2a396a8fcc581 389 Gene3D G3DSA:3.40.50.150 165 357 1.2E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS02550 693b972253b69a7505a2a396a8fcc581 389 SUPERFAMILY SSF53335 160 349 4.04E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS02550 693b972253b69a7505a2a396a8fcc581 389 PANTHER PTHR18895:SF64 213 384 4.1E-18 T 22-04-2016 PNUC_RS02550 693b972253b69a7505a2a396a8fcc581 389 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 275 281 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 Gene3D G3DSA:3.30.499.10 403 520 9.5E-60 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 PIRSF PIRSF036687 1 859 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 Gene3D G3DSA:3.40.1060.10 521 683 1.1E-84 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 PANTHER PTHR11670 303 859 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 ProSitePatterns PS00450 Aconitase family signature 1. 703 720 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 Gene3D G3DSA:3.30.499.10 684 859 2.5E-51 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 Pfam PF11791 Aconitate B N-terminal domain 5 156 5.9E-61 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 380 1.4E-94 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 7.5E-38 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 SUPERFAMILY SSF74778 1 160 3.92E-63 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 SUPERFAMILY SSF53732 378 852 8.11E-142 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 SUPERFAMILY SSF52016 162 370 5.69E-66 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 Gene3D G3DSA:3.20.19.10 162 359 1.4E-90 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PNUC_RS04910 e6da38f8919e121e1849d95bb7c31e32 861 PANTHER PTHR11670:SF39 303 859 0.0 T 22-04-2016 PNUC_RS05200 afa46a4d2368d6e6342052feab4eb4ad 286 PANTHER PTHR30151:SF7 87 286 4.5E-101 T 22-04-2016 PNUC_RS05200 afa46a4d2368d6e6342052feab4eb4ad 286 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 79 273 3.9E-65 T 22-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 PNUC_RS05200 afa46a4d2368d6e6342052feab4eb4ad 286 SUPERFAMILY SSF161098 90 274 5.1E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS05200 afa46a4d2368d6e6342052feab4eb4ad 286 Gene3D G3DSA:1.10.3720.10 87 281 3.9E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS05200 afa46a4d2368d6e6342052feab4eb4ad 286 PANTHER PTHR30151 87 286 4.5E-101 T 22-04-2016 PNUC_RS05200 afa46a4d2368d6e6342052feab4eb4ad 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 277 3.1E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 Pfam PF00270 DEAD/DEAH box helicase 288 431 1.3E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 PANTHER PTHR24031 265 279 8.7E-124 T 22-04-2016 PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 PANTHER PTHR24031 296 599 8.7E-124 T 22-04-2016 PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 PANTHER PTHR24031 622 669 8.7E-124 T 22-04-2016 PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 SUPERFAMILY SSF52540 449 651 5.55E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 SMART SM00490 502 585 2.5E-20 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 SUPERFAMILY SSF50249 8 158 7.45E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 20 661 3.5E-213 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 Gene3D G3DSA:2.40.50.140 49 127 6.0E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 Pfam PF00271 Helicase conserved C-terminal domain 477 584 4.9E-18 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 SMART SM00487 262 456 2.1E-31 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 Gene3D G3DSA:3.40.50.300 258 450 2.9E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 PANTHER PTHR24031:SF249 265 279 8.7E-124 T 22-04-2016 PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 PANTHER PTHR24031:SF249 296 599 8.7E-124 T 22-04-2016 PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 PANTHER PTHR24031:SF249 622 669 8.7E-124 T 22-04-2016 PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 Gene3D G3DSA:3.40.50.300 451 633 4.2E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 Pfam PF17191 RecG wedge domain 8 154 1.5E-8 T 22-04-2016 IPR033454 RecG, wedge domain PNUC_RS09280 1fc1b42bf6756ae04e699e317819897b 689 SUPERFAMILY SSF52540 182 450 2.61E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 SUPERFAMILY SSF55973 236 386 4.47E-70 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 375 1.8E-69 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 2.2E-40 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.072 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 385 1.3E-185 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 Gene3D G3DSA:3.30.300.10 12 135 2.3E-46 T 22-04-2016 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 Gene3D G3DSA:3.30.300.10 136 236 3.6E-43 T 22-04-2016 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 PIRSF PIRSF000497 1 387 9.5E-173 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 Gene3D G3DSA:3.30.300.10 247 386 1.1E-70 T 22-04-2016 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 SUPERFAMILY SSF55973 4 110 9.03E-46 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 234 9.6E-46 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 PANTHER PTHR11964 1 381 5.9E-267 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PNUC_RS10365 ef18743b4745ac943547514ec329e03c 388 SUPERFAMILY SSF55973 114 235 7.85E-51 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PNUC_RS01165 9048f69d14d1e0879808ec99ef784ce9 245 Gene3D G3DSA:1.10.3810.10 57 233 3.2E-55 T 22-04-2016 PNUC_RS01165 9048f69d14d1e0879808ec99ef784ce9 245 PANTHER PTHR30400:SF0 1 240 3.2E-58 T 22-04-2016 PNUC_RS01165 9048f69d14d1e0879808ec99ef784ce9 245 PANTHER PTHR30400 1 240 3.2E-58 T 22-04-2016 PNUC_RS01165 9048f69d14d1e0879808ec99ef784ce9 245 Pfam PF00912 Transglycosylase 58 232 6.1E-50 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 PNUC_RS01165 9048f69d14d1e0879808ec99ef784ce9 245 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 8 235 4.8E-71 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 PNUC_RS01165 9048f69d14d1e0879808ec99ef784ce9 245 SUPERFAMILY SSF53955 54 232 6.47E-47 T 22-04-2016 IPR023346 Lysozyme-like domain PNUC_RS05435 7b4e6c03ab33c1ce707c9f729c2e0970 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 3 102 20.177 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PNUC_RS05435 7b4e6c03ab33c1ce707c9f729c2e0970 102 PANTHER PTHR11434 4 102 8.1E-38 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PNUC_RS05435 7b4e6c03ab33c1ce707c9f729c2e0970 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 97 4.7E-22 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 795 5.1E-288 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 Gene3D G3DSA:3.30.413.10 633 768 1.4E-33 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PANTHER PTHR22912:SF1 1 416 2.5E-158 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 Pfam PF04324 BFD-like [2Fe-2S] binding domain 488 538 1.0E-14 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 3.5E-14 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 769 7.7E-23 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 Gene3D G3DSA:3.50.50.60 109 307 2.8E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 SUPERFAMILY SSF51905 144 311 2.69E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 SUPERFAMILY SSF56014 634 795 5.5E-47 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 625 2.0E-14 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 8.88E-20 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 8.88E-20 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 8.88E-20 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 8.88E-20 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 8.88E-20 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 SUPERFAMILY SSF51905 2 193 9.15E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PIRSF PIRSF037149 1 813 0.0 T 22-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PANTHER PTHR22912 1 416 2.5E-158 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 Gene3D G3DSA:3.50.50.60 2 108 1.8E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.99E-11 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.99E-11 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 2.99E-11 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 2.99E-11 T 22-04-2016 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 282 5.9E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 1.94E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 1.94E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS05220 49ffd3c03b6fc5f08c0480076030898f 816 SUPERFAMILY SSF55124 522 642 4.42E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PNUC_RS05825 84c309b3b747845863f22b4ff7b0b21f 115 Gene3D G3DSA:1.10.10.10 28 100 3.9E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS05825 84c309b3b747845863f22b4ff7b0b21f 115 SUPERFAMILY SSF46785 33 102 8.24E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS05825 84c309b3b747845863f22b4ff7b0b21f 115 Pfam PF12840 Helix-turn-helix domain 43 100 2.2E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 Gene3D G3DSA:1.10.287.990 20 82 5.5E-25 T 22-04-2016 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 SUPERFAMILY SSF46609 1 84 2.36E-36 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 PANTHER PTHR11404:SF8 1 192 1.8E-111 T 22-04-2016 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 PIRSF PIRSF000349 1 192 1.9E-88 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 4.4E-40 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 7.6E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 7.6E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 7.6E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 7.6E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 7.6E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 3.8E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 SUPERFAMILY SSF54719 82 191 6.94E-45 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS07255 f782edaead5393fe665168f04c049b3b 192 PANTHER PTHR11404 1 192 1.8E-111 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS01880 b58b4b91df44798ae3fb152ba183be92 242 SMART SM00382 26 217 6.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS01880 b58b4b91df44798ae3fb152ba183be92 242 Pfam PF00005 ABC transporter 17 166 3.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS01880 b58b4b91df44798ae3fb152ba183be92 242 Gene3D G3DSA:3.40.50.300 1 235 2.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01880 b58b4b91df44798ae3fb152ba183be92 242 PANTHER PTHR24220 3 237 6.4E-119 T 22-04-2016 PNUC_RS01880 b58b4b91df44798ae3fb152ba183be92 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS01880 b58b4b91df44798ae3fb152ba183be92 242 SUPERFAMILY SSF52540 2 236 2.88E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01880 b58b4b91df44798ae3fb152ba183be92 242 PANTHER PTHR24220:SF568 3 237 6.4E-119 T 22-04-2016 PNUC_RS02850 3185ad4f4cab335d99bb2c8fc6dad599 239 PANTHER PTHR33447 50 237 2.5E-50 T 22-04-2016 PNUC_RS02850 3185ad4f4cab335d99bb2c8fc6dad599 239 SUPERFAMILY SSF54001 26 233 5.79E-57 T 22-04-2016 PNUC_RS02850 3185ad4f4cab335d99bb2c8fc6dad599 239 Pfam PF05023 Phytochelatin synthase 24 232 1.3E-59 T 22-04-2016 IPR007719 Phytochelatin synthase GO:0010038|GO:0016756|GO:0046872|GO:0046938 MetaCyc: PWY-6745 PNUC_RS02640 8d4019d6fd871c96ca65e67b99a4e5f7 246 SUPERFAMILY SSF53474 17 163 1.18E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS02640 8d4019d6fd871c96ca65e67b99a4e5f7 246 Gene3D G3DSA:3.40.50.1820 39 165 5.7E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS10405 20a1fd0c8699099f5fce96e6562387a9 379 PANTHER PTHR32268 7 374 8.9E-172 T 22-04-2016 PNUC_RS10405 20a1fd0c8699099f5fce96e6562387a9 379 PIRSF PIRSF000443 4 378 2.2E-142 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 PNUC_RS10405 20a1fd0c8699099f5fce96e6562387a9 379 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 15 371 1.3E-140 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 PNUC_RS10405 20a1fd0c8699099f5fce96e6562387a9 379 Pfam PF00561 alpha/beta hydrolase fold 44 359 9.3E-39 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS10405 20a1fd0c8699099f5fce96e6562387a9 379 SUPERFAMILY SSF53474 11 373 2.83E-107 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS10405 20a1fd0c8699099f5fce96e6562387a9 379 Gene3D G3DSA:3.40.50.1820 26 372 6.3E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS10405 20a1fd0c8699099f5fce96e6562387a9 379 PANTHER PTHR32268:SF11 7 374 8.9E-172 T 22-04-2016 PNUC_RS10405 20a1fd0c8699099f5fce96e6562387a9 379 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 1 373 48.249 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 PNUC_RS02015 d5b42a77e96f77a60ac0b2669c11e0fd 338 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 161 188 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PNUC_RS02015 d5b42a77e96f77a60ac0b2669c11e0fd 338 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 120 299 1.5E-58 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PNUC_RS02015 d5b42a77e96f77a60ac0b2669c11e0fd 338 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 16 331 4.5E-27 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PNUC_RS02015 d5b42a77e96f77a60ac0b2669c11e0fd 338 SUPERFAMILY SSF51735 112 300 9.26E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02015 d5b42a77e96f77a60ac0b2669c11e0fd 338 Gene3D G3DSA:3.40.50.720 127 302 1.5E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02015 d5b42a77e96f77a60ac0b2669c11e0fd 338 Gene3D G3DSA:3.40.50.720 13 126 5.1E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02015 d5b42a77e96f77a60ac0b2669c11e0fd 338 SUPERFAMILY SSF52283 13 146 3.59E-33 T 22-04-2016 PNUC_RS02015 d5b42a77e96f77a60ac0b2669c11e0fd 338 PANTHER PTHR10996 5 338 5.6E-125 T 22-04-2016 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 34 470 2.4E-123 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 PANTHER PTHR23135:SF3 16 472 8.2E-128 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 Pfam PF02875 Mur ligase family, glutamate ligase domain 323 401 4.7E-16 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 SUPERFAMILY SSF63418 22 102 8.76E-20 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 SUPERFAMILY SSF53623 107 322 2.35E-45 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 Pfam PF01225 Mur ligase family, catalytic domain 29 102 4.4E-9 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 2 471 30.837 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 Pfam PF08245 Mur ligase middle domain 112 303 6.8E-38 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 Gene3D G3DSA:3.40.1190.10 96 321 7.2E-60 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 PANTHER PTHR23135 16 472 8.2E-128 T 22-04-2016 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 Gene3D G3DSA:3.40.1390.10 20 95 1.2E-21 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 SUPERFAMILY SSF53244 323 470 2.75E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS00885 9a7cd4872d96b3628ac51a3d452b67eb 478 Gene3D G3DSA:3.90.190.20 322 474 4.8E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS07605 58445da302226bd1d8138f35e1d57394 136 Pfam PF07681 DoxX 10 89 1.2E-19 T 22-04-2016 IPR032808 DoxX family PNUC_RS07605 58445da302226bd1d8138f35e1d57394 136 PANTHER PTHR33452 5 133 9.3E-26 T 22-04-2016 PNUC_RS07605 58445da302226bd1d8138f35e1d57394 136 PANTHER PTHR33452:SF6 5 133 9.3E-26 T 22-04-2016 PNUC_RS05330 16fbb354cd0d6c3b0094de68dc95b0b3 627 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 587 3.7E-23 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PNUC_RS05330 16fbb354cd0d6c3b0094de68dc95b0b3 627 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 1 622 0.0 T 22-04-2016 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747|UniPathway: UPA00946 PNUC_RS05330 16fbb354cd0d6c3b0094de68dc95b0b3 627 Gene3D G3DSA:3.40.50.980 54 241 6.0E-38 T 22-04-2016 PNUC_RS05330 16fbb354cd0d6c3b0094de68dc95b0b3 627 PANTHER PTHR24095 1 623 0.0 T 22-04-2016 PNUC_RS05330 16fbb354cd0d6c3b0094de68dc95b0b3 627 Gene3D G3DSA:3.40.50.980 242 394 2.2E-27 T 22-04-2016 PNUC_RS05330 16fbb354cd0d6c3b0094de68dc95b0b3 627 Pfam PF00501 AMP-binding enzyme 59 501 2.4E-81 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PNUC_RS05330 16fbb354cd0d6c3b0094de68dc95b0b3 627 Gene3D G3DSA:3.30.300.30 496 602 2.3E-26 T 22-04-2016 PNUC_RS05330 16fbb354cd0d6c3b0094de68dc95b0b3 627 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 57 1.5E-23 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 PNUC_RS05330 16fbb354cd0d6c3b0094de68dc95b0b3 627 PANTHER PTHR24095:SF165 1 623 0.0 T 22-04-2016 PNUC_RS05330 16fbb354cd0d6c3b0094de68dc95b0b3 627 SUPERFAMILY SSF56801 3 617 3.01E-158 T 22-04-2016 PNUC_RS05330 16fbb354cd0d6c3b0094de68dc95b0b3 627 Gene3D G3DSA:2.30.38.10 410 491 9.6E-5 T 22-04-2016 PNUC_RS05330 16fbb354cd0d6c3b0094de68dc95b0b3 627 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 22-04-2016 IPR020845 AMP-binding, conserved site PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 PANTHER PTHR11946 5 551 5.7E-186 T 22-04-2016 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 Pfam PF09334 tRNA synthetases class I (M) 9 403 5.4E-147 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 541 1.0E-165 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 SUPERFAMILY SSF57770 142 175 2.75E-12 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 PANTHER PTHR11946:SF86 5 551 5.7E-186 T 22-04-2016 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 Gene3D G3DSA:3.40.50.620 183 387 1.9E-88 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 Gene3D G3DSA:3.40.50.620 7 144 1.9E-88 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 7.0E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 7.0E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 PRINTS PR01041 Methionyl-tRNA synthetase signature 258 269 7.0E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 7.0E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 PRINTS PR01041 Methionyl-tRNA synthetase signature 391 402 7.0E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 PRINTS PR01041 Methionyl-tRNA synthetase signature 297 312 7.0E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 Gene3D G3DSA:2.20.28.20 145 176 1.4E-18 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 Gene3D G3DSA:1.10.730.10 388 543 5.9E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 554 39.53 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 SUPERFAMILY SSF52374 6 141 9.3E-100 T 22-04-2016 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 SUPERFAMILY SSF52374 176 393 9.3E-100 T 22-04-2016 PNUC_RS03375 0191a84809f097206f9e53eb33539c83 554 SUPERFAMILY SSF47323 396 552 4.49E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS10445 28fc55128f27b5c078f4916c25f88ef5 505 Gene3D G3DSA:3.90.1300.10 2 499 2.2E-175 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS10445 28fc55128f27b5c078f4916c25f88ef5 505 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 495 92.034 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS10445 28fc55128f27b5c078f4916c25f88ef5 505 ProSitePatterns PS00571 Amidases signature. 158 189 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS10445 28fc55128f27b5c078f4916c25f88ef5 505 PANTHER PTHR11895 8 501 8.8E-212 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS10445 28fc55128f27b5c078f4916c25f88ef5 505 Pfam PF01425 Amidase 24 484 8.2E-148 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS10445 28fc55128f27b5c078f4916c25f88ef5 505 SUPERFAMILY SSF75304 1 499 1.09E-155 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS10445 28fc55128f27b5c078f4916c25f88ef5 505 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 495 1.9E-175 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS10445 28fc55128f27b5c078f4916c25f88ef5 505 PANTHER PTHR11895:SF7 8 501 8.8E-212 T 22-04-2016 PNUC_RS03840 9749888c579114cc2763e85630571862 534 PANTHER PTHR23151:SF68 24 272 3.8E-230 T 22-04-2016 PNUC_RS03840 9749888c579114cc2763e85630571862 534 PANTHER PTHR23151:SF68 290 531 3.8E-230 T 22-04-2016 PNUC_RS03840 9749888c579114cc2763e85630571862 534 SUPERFAMILY SSF51230 106 196 2.49E-21 T 22-04-2016 IPR011053 Single hybrid motif PNUC_RS03840 9749888c579114cc2763e85630571862 534 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PNUC_RS03840 9749888c579114cc2763e85630571862 534 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 130 159 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PNUC_RS03840 9749888c579114cc2763e85630571862 534 Pfam PF00364 Biotin-requiring enzyme 6 76 2.9E-20 T 22-04-2016 IPR000089 Biotin/lipoyl attachment PNUC_RS03840 9749888c579114cc2763e85630571862 534 Pfam PF00364 Biotin-requiring enzyme 108 179 3.6E-20 T 22-04-2016 IPR000089 Biotin/lipoyl attachment PNUC_RS03840 9749888c579114cc2763e85630571862 534 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 83 534 5.1E-183 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 PNUC_RS03840 9749888c579114cc2763e85630571862 534 Gene3D G3DSA:3.30.559.10 297 531 2.4E-82 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain PNUC_RS03840 9749888c579114cc2763e85630571862 534 SUPERFAMILY SSF52777 296 530 2.36E-81 T 22-04-2016 PNUC_RS03840 9749888c579114cc2763e85630571862 534 Gene3D G3DSA:2.40.50.100 5 80 3.7E-22 T 22-04-2016 PNUC_RS03840 9749888c579114cc2763e85630571862 534 Gene3D G3DSA:2.40.50.100 107 181 1.4E-21 T 22-04-2016 PNUC_RS03840 9749888c579114cc2763e85630571862 534 Gene3D G3DSA:4.10.320.10 232 275 2.6E-20 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PNUC_RS03840 9749888c579114cc2763e85630571862 534 SUPERFAMILY SSF51230 3 94 4.19E-23 T 22-04-2016 IPR011053 Single hybrid motif PNUC_RS03840 9749888c579114cc2763e85630571862 534 PANTHER PTHR23151 24 272 3.8E-230 T 22-04-2016 PNUC_RS03840 9749888c579114cc2763e85630571862 534 PANTHER PTHR23151 290 531 3.8E-230 T 22-04-2016 PNUC_RS03840 9749888c579114cc2763e85630571862 534 SUPERFAMILY SSF47005 231 270 2.49E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PNUC_RS03840 9749888c579114cc2763e85630571862 534 Pfam PF02817 e3 binding domain 232 266 3.8E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PNUC_RS03840 9749888c579114cc2763e85630571862 534 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 307 531 2.0E-78 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 PNUC_RS03945 c62f45821130a88086b6f64edaa04522 329 SUPERFAMILY SSF51735 4 158 1.11E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03945 c62f45821130a88086b6f64edaa04522 329 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 328 55.705 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 PNUC_RS03945 c62f45821130a88086b6f64edaa04522 329 Gene3D G3DSA:3.40.50.720 4 156 5.4E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03945 c62f45821130a88086b6f64edaa04522 329 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 160 322 1.3E-32 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 PNUC_RS03945 c62f45821130a88086b6f64edaa04522 329 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 155 2.9E-37 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 PNUC_RS03945 c62f45821130a88086b6f64edaa04522 329 SUPERFAMILY SSF56327 160 328 4.32E-59 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PNUC_RS03945 c62f45821130a88086b6f64edaa04522 329 PANTHER PTHR23382 2 329 1.6E-191 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 PNUC_RS03945 c62f45821130a88086b6f64edaa04522 329 PIRSF PIRSF000102 2 327 7.7E-66 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PNUC_RS03945 c62f45821130a88086b6f64edaa04522 329 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 322 1.3E-147 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 PNUC_RS03945 c62f45821130a88086b6f64edaa04522 329 Gene3D G3DSA:3.90.110.10 158 328 1.7E-71 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PNUC_RS02495 fc69dc5c89203c7870d29dbf01158d2a 125 PANTHER PTHR28259 1 125 8.2E-30 T 22-04-2016 PNUC_RS02495 fc69dc5c89203c7870d29dbf01158d2a 125 TIGRFAM TIGR00494 crcB: protein CrcB 6 119 1.8E-25 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PNUC_RS02495 fc69dc5c89203c7870d29dbf01158d2a 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 4.0E-20 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PNUC_RS02495 fc69dc5c89203c7870d29dbf01158d2a 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 17.217 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PNUC_RS06110 857e3f70536554a248ba5af1353fdd63 330 PIRSF PIRSF017082 1 329 9.3E-71 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS06110 857e3f70536554a248ba5af1353fdd63 330 PANTHER PTHR30349:SF32 17 316 2.1E-80 T 22-04-2016 PNUC_RS06110 857e3f70536554a248ba5af1353fdd63 330 SUPERFAMILY SSF53850 114 290 3.58E-10 T 22-04-2016 PNUC_RS06110 857e3f70536554a248ba5af1353fdd63 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 326 4.9E-76 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS06110 857e3f70536554a248ba5af1353fdd63 330 PANTHER PTHR30349 17 316 2.1E-80 T 22-04-2016 PNUC_RS08730 06a91c82b7429fcb095011e07020d4a7 132 PANTHER PTHR30204 1 118 5.1E-44 T 22-04-2016 PNUC_RS08730 06a91c82b7429fcb095011e07020d4a7 132 Gene3D G3DSA:1.10.1660.10 1 55 5.1E-25 T 22-04-2016 PNUC_RS08730 06a91c82b7429fcb095011e07020d4a7 132 PANTHER PTHR30204:SF18 1 118 5.1E-44 T 22-04-2016 PNUC_RS08730 06a91c82b7429fcb095011e07020d4a7 132 Pfam PF13411 MerR HTH family regulatory protein 1 68 2.8E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PNUC_RS08730 06a91c82b7429fcb095011e07020d4a7 132 SMART SM00422 1 70 2.9E-31 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PNUC_RS08730 06a91c82b7429fcb095011e07020d4a7 132 Gene3D G3DSA:1.10.1660.10 56 128 8.2E-26 T 22-04-2016 PNUC_RS08730 06a91c82b7429fcb095011e07020d4a7 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.9E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PNUC_RS08730 06a91c82b7429fcb095011e07020d4a7 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.9E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PNUC_RS08730 06a91c82b7429fcb095011e07020d4a7 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.9E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PNUC_RS08730 06a91c82b7429fcb095011e07020d4a7 132 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 3.9E-52 T 22-04-2016 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 PNUC_RS08730 06a91c82b7429fcb095011e07020d4a7 132 SUPERFAMILY SSF46955 1 127 8.79E-35 T 22-04-2016 IPR009061 Putative DNA-binding domain PNUC_RS09720 3c9e64c09556852bc9bde6eeead07fd5 385 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 282 295 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 PNUC_RS09720 3c9e64c09556852bc9bde6eeead07fd5 385 Gene3D G3DSA:3.50.50.60 6 171 1.2E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS09720 3c9e64c09556852bc9bde6eeead07fd5 385 Gene3D G3DSA:3.50.50.60 256 349 1.2E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS09720 3c9e64c09556852bc9bde6eeead07fd5 385 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 381 4.4E-81 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 PNUC_RS09720 3c9e64c09556852bc9bde6eeead07fd5 385 PANTHER PTHR13789:SF214 1 381 4.0E-72 T 22-04-2016 PNUC_RS09720 3c9e64c09556852bc9bde6eeead07fd5 385 SUPERFAMILY SSF51905 255 376 1.1E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS09720 3c9e64c09556852bc9bde6eeead07fd5 385 SUPERFAMILY SSF51905 6 166 1.1E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS09720 3c9e64c09556852bc9bde6eeead07fd5 385 PANTHER PTHR13789 1 381 4.0E-72 T 22-04-2016 PNUC_RS09720 3c9e64c09556852bc9bde6eeead07fd5 385 Pfam PF01494 FAD binding domain 136 313 2.0E-11 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 PNUC_RS09720 3c9e64c09556852bc9bde6eeead07fd5 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 268 283 6.7E-8 T 22-04-2016 PNUC_RS09720 3c9e64c09556852bc9bde6eeead07fd5 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 299 6.7E-8 T 22-04-2016 PNUC_RS09720 3c9e64c09556852bc9bde6eeead07fd5 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 6.7E-8 T 22-04-2016 PNUC_RS07680 ace6f86f548ff4e9476e0b36ff5d04b0 420 Pfam PF12704 MacB-like periplasmic core domain 35 249 8.9E-18 T 22-04-2016 IPR025857 MacB-like periplasmic core domain PNUC_RS07680 ace6f86f548ff4e9476e0b36ff5d04b0 420 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 420 1.1E-138 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 PNUC_RS07680 ace6f86f548ff4e9476e0b36ff5d04b0 420 Pfam PF02687 FtsX-like permease family 280 413 3.7E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PNUC_RS07680 ace6f86f548ff4e9476e0b36ff5d04b0 420 PANTHER PTHR30489:SF8 1 420 3.2E-92 T 22-04-2016 PNUC_RS07680 ace6f86f548ff4e9476e0b36ff5d04b0 420 PANTHER PTHR30489 1 420 3.2E-92 T 22-04-2016 PNUC_RS02665 3a8dd5298aba78072b6f758d9d3ecd5b 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 458 532 2.5E-19 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PNUC_RS02665 3a8dd5298aba78072b6f758d9d3ecd5b 550 SUPERFAMILY SSF56801 15 542 1.7E-137 T 22-04-2016 PNUC_RS02665 3a8dd5298aba78072b6f758d9d3ecd5b 550 Gene3D G3DSA:3.30.300.30 444 542 1.3E-31 T 22-04-2016 PNUC_RS02665 3a8dd5298aba78072b6f758d9d3ecd5b 550 Gene3D G3DSA:3.40.50.980 23 132 2.4E-37 T 22-04-2016 PNUC_RS02665 3a8dd5298aba78072b6f758d9d3ecd5b 550 Gene3D G3DSA:3.40.50.980 177 202 2.4E-37 T 22-04-2016 PNUC_RS02665 3a8dd5298aba78072b6f758d9d3ecd5b 550 PANTHER PTHR24095 1 542 3.1E-269 T 22-04-2016 PNUC_RS02665 3a8dd5298aba78072b6f758d9d3ecd5b 550 Pfam PF00501 AMP-binding enzyme 25 449 2.9E-91 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PNUC_RS02665 3a8dd5298aba78072b6f758d9d3ecd5b 550 Gene3D G3DSA:2.30.38.10 374 442 3.8E-18 T 22-04-2016 PNUC_RS02665 3a8dd5298aba78072b6f758d9d3ecd5b 550 Gene3D G3DSA:3.40.50.980 203 356 2.5E-26 T 22-04-2016 PNUC_RS02665 3a8dd5298aba78072b6f758d9d3ecd5b 550 PANTHER PTHR24095:SF169 1 542 3.1E-269 T 22-04-2016 PNUC_RS10510 c951fda9c4ff9d4bd8f85f58354fce76 250 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 213 1.3E-18 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type PNUC_RS10510 c951fda9c4ff9d4bd8f85f58354fce76 250 SUPERFAMILY SSF56300 1 250 8.09E-48 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS10510 c951fda9c4ff9d4bd8f85f58354fce76 250 Gene3D G3DSA:3.60.21.10 4 250 1.9E-64 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS10510 c951fda9c4ff9d4bd8f85f58354fce76 250 PANTHER PTHR11124:SF2 187 250 2.4E-35 T 22-04-2016 PNUC_RS10510 c951fda9c4ff9d4bd8f85f58354fce76 250 PANTHER PTHR11124:SF2 103 166 2.4E-35 T 22-04-2016 PNUC_RS10510 c951fda9c4ff9d4bd8f85f58354fce76 250 PANTHER PTHR11124:SF2 1 78 2.4E-35 T 22-04-2016 PNUC_RS10510 c951fda9c4ff9d4bd8f85f58354fce76 250 PIRSF PIRSF000883 3 250 5.3E-43 T 22-04-2016 IPR011152 Phosphoesterase MJ0912 PNUC_RS10510 c951fda9c4ff9d4bd8f85f58354fce76 250 PANTHER PTHR11124 187 250 2.4E-35 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 PNUC_RS10510 c951fda9c4ff9d4bd8f85f58354fce76 250 PANTHER PTHR11124 103 166 2.4E-35 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 PNUC_RS10510 c951fda9c4ff9d4bd8f85f58354fce76 250 PANTHER PTHR11124 1 78 2.4E-35 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 PNUC_RS00580 7a478adee64d7bb4aa49158e3a896df3 424 PANTHER PTHR21090 1 423 8.4E-186 T 22-04-2016 PNUC_RS00580 7a478adee64d7bb4aa49158e3a896df3 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 413 6.1E-107 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PNUC_RS00580 7a478adee64d7bb4aa49158e3a896df3 424 Gene3D G3DSA:3.65.10.10 228 423 1.3E-59 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PNUC_RS00580 7a478adee64d7bb4aa49158e3a896df3 424 Gene3D G3DSA:3.65.10.10 21 227 1.8E-65 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PNUC_RS00580 7a478adee64d7bb4aa49158e3a896df3 424 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 423 46.087 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00580 7a478adee64d7bb4aa49158e3a896df3 424 SUPERFAMILY SSF55205 1 423 1.42E-138 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PNUC_RS00580 7a478adee64d7bb4aa49158e3a896df3 424 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 422 9.6E-174 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS10650 aaab1b7e74f5e80aee80c2fb7578d404 256 SUPERFAMILY SSF81296 75 253 9.33E-53 T 22-04-2016 IPR014756 Immunoglobulin E-set PNUC_RS10650 aaab1b7e74f5e80aee80c2fb7578d404 256 PANTHER PTHR11767 1 253 2.0E-56 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 PNUC_RS10650 aaab1b7e74f5e80aee80c2fb7578d404 256 PANTHER PTHR11767:SF58 1 253 2.0E-56 T 22-04-2016 PNUC_RS10650 aaab1b7e74f5e80aee80c2fb7578d404 256 SUPERFAMILY SSF81324 2 99 1.11E-20 T 22-04-2016 PNUC_RS10650 aaab1b7e74f5e80aee80c2fb7578d404 256 Gene3D G3DSA:1.10.287.70 5 84 4.9E-17 T 22-04-2016 PNUC_RS10650 aaab1b7e74f5e80aee80c2fb7578d404 256 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 163 181 2.5E-10 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 PNUC_RS10650 aaab1b7e74f5e80aee80c2fb7578d404 256 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 215 232 2.5E-10 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 PNUC_RS10650 aaab1b7e74f5e80aee80c2fb7578d404 256 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 194 214 2.5E-10 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 PNUC_RS10650 aaab1b7e74f5e80aee80c2fb7578d404 256 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 3 29 2.5E-10 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 PNUC_RS10650 aaab1b7e74f5e80aee80c2fb7578d404 256 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 241 255 2.5E-10 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 PNUC_RS10650 aaab1b7e74f5e80aee80c2fb7578d404 256 Gene3D G3DSA:2.60.40.1400 85 253 5.7E-49 T 22-04-2016 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic PNUC_RS10650 aaab1b7e74f5e80aee80c2fb7578d404 256 Pfam PF01007 Inward rectifier potassium channel 39 253 2.6E-36 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 22 512 42.978 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 17 511 1.5E-195 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 PANTHER PTHR22594:SF4 4 514 4.8E-255 T 22-04-2016 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 SUPERFAMILY SSF50249 14 155 3.67E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 Pfam PF00152 tRNA synthetases class II (D, K and N) 164 509 3.7E-81 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 PANTHER PTHR22594 4 514 4.8E-255 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 SUPERFAMILY SSF55681 162 510 6.08E-114 T 22-04-2016 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 Pfam PF01336 OB-fold nucleic acid binding domain 69 146 2.3E-11 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 Gene3D G3DSA:2.40.50.140 17 154 4.8E-45 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 Gene3D G3DSA:3.30.930.10 157 508 8.6E-113 T 22-04-2016 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.7E-37 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 394 410 1.7E-37 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.7E-37 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.7E-37 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PNUC_RS07700 b94cb99242de28232d5a82d77d354198 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.7E-37 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 SUPERFAMILY SSF56176 19 275 2.62E-54 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 SUPERFAMILY SSF46548 587 674 4.66E-9 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 Gene3D G3DSA:1.10.1060.10 588 684 5.1E-13 T 22-04-2016 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 Gene3D G3DSA:1.10.1060.10 507 542 5.1E-13 T 22-04-2016 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 Pfam PF13183 4Fe-4S dicluster domain 588 669 1.9E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 Pfam PF01565 FAD binding domain 51 184 5.4E-31 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 PANTHER PTHR11748 17 191 3.9E-111 T 22-04-2016 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 PANTHER PTHR11748 250 600 3.9E-111 T 22-04-2016 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 PANTHER PTHR11748 221 230 3.9E-111 T 22-04-2016 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 655 666 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 Pfam PF02913 FAD linked oxidases, C-terminal domain 274 528 7.9E-49 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 PANTHER PTHR11748:SF35 17 191 3.9E-111 T 22-04-2016 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 PANTHER PTHR11748:SF35 250 600 3.9E-111 T 22-04-2016 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 PANTHER PTHR11748:SF35 221 230 3.9E-111 T 22-04-2016 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 Gene3D G3DSA:3.30.43.10 21 98 4.3E-15 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 Gene3D G3DSA:3.30.465.10 105 275 1.6E-33 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PNUC_RS03135 067cadf2588a58b5a9931cacb934ddf5 1025 SUPERFAMILY SSF55103 249 530 9.65E-59 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PNUC_RS07930 8faf0bf838ac2389e1703792e186aade 215 PANTHER PTHR24220 17 207 3.7E-74 T 22-04-2016 PNUC_RS07930 8faf0bf838ac2389e1703792e186aade 215 Pfam PF00005 ABC transporter 33 173 3.3E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS07930 8faf0bf838ac2389e1703792e186aade 215 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 16 215 2.1E-68 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 PNUC_RS07930 8faf0bf838ac2389e1703792e186aade 215 SMART SM00382 40 209 8.0E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS07930 8faf0bf838ac2389e1703792e186aade 215 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS07930 8faf0bf838ac2389e1703792e186aade 215 Gene3D G3DSA:3.40.50.300 10 204 2.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07930 8faf0bf838ac2389e1703792e186aade 215 SUPERFAMILY SSF52540 13 204 5.72E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07930 8faf0bf838ac2389e1703792e186aade 215 PANTHER PTHR24220:SF508 17 207 3.7E-74 T 22-04-2016 PNUC_RS07540 d9af21497d75d58385498b461c897be5 355 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 235 269 6.3E-7 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS07540 d9af21497d75d58385498b461c897be5 355 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 155 188 1.4E-4 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS07540 d9af21497d75d58385498b461c897be5 355 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 151 6.3E-5 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS07540 d9af21497d75d58385498b461c897be5 355 PANTHER PTHR22572:SF117 107 308 2.6E-47 T 22-04-2016 PNUC_RS07540 d9af21497d75d58385498b461c897be5 355 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 340 35.285 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 PNUC_RS07540 d9af21497d75d58385498b461c897be5 355 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 343 1.2E-107 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 PNUC_RS07540 d9af21497d75d58385498b461c897be5 355 Gene3D G3DSA:2.160.10.10 219 318 4.2E-19 T 22-04-2016 PNUC_RS07540 d9af21497d75d58385498b461c897be5 355 Gene3D G3DSA:2.160.10.10 116 218 2.8E-20 T 22-04-2016 PNUC_RS07540 d9af21497d75d58385498b461c897be5 355 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 95 1.5E-20 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 PNUC_RS07540 d9af21497d75d58385498b461c897be5 355 SUPERFAMILY SSF51161 30 330 4.15E-75 T 22-04-2016 IPR011004 Trimeric LpxA-like PNUC_RS07540 d9af21497d75d58385498b461c897be5 355 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 115 143 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 PNUC_RS07540 d9af21497d75d58385498b461c897be5 355 PANTHER PTHR22572 107 308 2.6E-47 T 22-04-2016 PNUC_RS01965 8c3660b749c72ba340d103bacb530373 241 Pfam PF00849 RNA pseudouridylate synthase 66 197 1.4E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS01965 8c3660b749c72ba340d103bacb530373 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PNUC_RS01965 8c3660b749c72ba340d103bacb530373 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 227 4.6E-38 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PNUC_RS01965 8c3660b749c72ba340d103bacb530373 241 PANTHER PTHR21600 3 235 7.5E-51 T 22-04-2016 PNUC_RS01965 8c3660b749c72ba340d103bacb530373 241 SUPERFAMILY SSF55174 7 85 2.94E-9 T 22-04-2016 PNUC_RS01965 8c3660b749c72ba340d103bacb530373 241 SUPERFAMILY SSF55120 65 232 1.46E-40 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS01965 8c3660b749c72ba340d103bacb530373 241 PANTHER PTHR21600:SF19 3 235 7.5E-51 T 22-04-2016 PNUC_RS01965 8c3660b749c72ba340d103bacb530373 241 Gene3D G3DSA:3.10.290.10 6 67 1.9E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS00350 cca6b8cd79631262cdea65ee2ff8812b 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00350 cca6b8cd79631262cdea65ee2ff8812b 137 PANTHER PTHR12220 1 134 6.7E-73 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PNUC_RS00350 cca6b8cd79631262cdea65ee2ff8812b 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.6E-59 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PNUC_RS00350 cca6b8cd79631262cdea65ee2ff8812b 137 Gene3D G3DSA:3.90.1170.10 22 134 4.5E-51 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00350 cca6b8cd79631262cdea65ee2ff8812b 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.287 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PNUC_RS00350 cca6b8cd79631262cdea65ee2ff8812b 137 SUPERFAMILY SSF54686 1 134 4.71E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00350 cca6b8cd79631262cdea65ee2ff8812b 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.2E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00350 cca6b8cd79631262cdea65ee2ff8812b 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 5.9E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PNUC_RS00350 cca6b8cd79631262cdea65ee2ff8812b 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 5.9E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PNUC_RS00350 cca6b8cd79631262cdea65ee2ff8812b 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 5.9E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PNUC_RS00350 cca6b8cd79631262cdea65ee2ff8812b 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 5.9E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PNUC_RS02795 92932e3847110fc552c2cc93f8eef2f8 218 Pfam PF00929 Exonuclease 43 205 4.5E-22 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PNUC_RS02795 92932e3847110fc552c2cc93f8eef2f8 218 PANTHER PTHR30231:SF7 4 212 7.7E-70 T 22-04-2016 PNUC_RS02795 92932e3847110fc552c2cc93f8eef2f8 218 Gene3D G3DSA:3.30.420.10 39 217 9.8E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS02795 92932e3847110fc552c2cc93f8eef2f8 218 SUPERFAMILY SSF53098 35 216 1.06E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS02795 92932e3847110fc552c2cc93f8eef2f8 218 PANTHER PTHR30231 4 212 7.7E-70 T 22-04-2016 PNUC_RS02795 92932e3847110fc552c2cc93f8eef2f8 218 SMART SM00479 41 218 7.9E-25 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PNUC_RS08530 8a9c1e794520e060fc3f57698235ca73 267 Pfam PF13531 Bacterial extracellular solute-binding protein 32 258 1.1E-34 T 22-04-2016 PNUC_RS08530 8a9c1e794520e060fc3f57698235ca73 267 SUPERFAMILY SSF53850 31 260 3.26E-35 T 22-04-2016 PNUC_RS08530 8a9c1e794520e060fc3f57698235ca73 267 Gene3D G3DSA:3.40.190.10 32 138 3.0E-11 T 22-04-2016 PNUC_RS08530 8a9c1e794520e060fc3f57698235ca73 267 PANTHER PTHR30632 1 262 8.7E-64 T 22-04-2016 PNUC_RS08530 8a9c1e794520e060fc3f57698235ca73 267 PANTHER PTHR30632:SF5 1 262 8.7E-64 T 22-04-2016 PNUC_RS04295 82ed4f3728b9043990a338eba9bfeecc 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 211 1.7E-95 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 PNUC_RS04295 82ed4f3728b9043990a338eba9bfeecc 216 Pfam PF01144 Coenzyme A transferase 7 205 3.1E-40 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS04295 82ed4f3728b9043990a338eba9bfeecc 216 PANTHER PTHR13707 3 210 6.8E-126 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS04295 82ed4f3728b9043990a338eba9bfeecc 216 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 22-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 PNUC_RS04295 82ed4f3728b9043990a338eba9bfeecc 216 Gene3D G3DSA:3.40.810.20 3 212 1.4E-91 T 22-04-2016 PNUC_RS04295 82ed4f3728b9043990a338eba9bfeecc 216 SMART SM00882 6 206 3.6E-80 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS04295 82ed4f3728b9043990a338eba9bfeecc 216 SUPERFAMILY SSF100950 3 212 1.0E-71 T 22-04-2016 PNUC_RS03185 1df0b11404855f824489f082be76a0a5 587 SUPERFAMILY SSF52540 331 584 3.7E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03185 1df0b11404855f824489f082be76a0a5 587 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS03185 1df0b11404855f824489f082be76a0a5 587 Pfam PF00664 ABC transporter transmembrane region 30 294 1.1E-42 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PNUC_RS03185 1df0b11404855f824489f082be76a0a5 587 Gene3D G3DSA:3.40.50.300 341 577 1.4E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03185 1df0b11404855f824489f082be76a0a5 587 Pfam PF00005 ABC transporter 363 513 1.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS03185 1df0b11404855f824489f082be76a0a5 587 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 10 585 6.2E-224 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 PNUC_RS03185 1df0b11404855f824489f082be76a0a5 587 SMART SM00382 370 559 2.5E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS03185 1df0b11404855f824489f082be76a0a5 587 SUPERFAMILY SSF90123 11 325 2.22E-68 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PNUC_RS03185 1df0b11404855f824489f082be76a0a5 587 Gene3D G3DSA:1.20.1560.10 11 325 1.9E-68 T 22-04-2016 PNUC_RS03185 1df0b11404855f824489f082be76a0a5 587 PANTHER PTHR24221 9 586 2.5E-204 T 22-04-2016 PNUC_RS04455 460a6b55555d7eb59c3f36ff8fa70eff 280 SMART SM00028 181 214 8.6E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS04455 460a6b55555d7eb59c3f36ff8fa70eff 280 SMART SM00028 147 180 69.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS04455 460a6b55555d7eb59c3f36ff8fa70eff 280 PANTHER PTHR23083 123 257 6.8E-18 T 22-04-2016 PNUC_RS04455 460a6b55555d7eb59c3f36ff8fa70eff 280 Pfam PF14559 Tetratricopeptide repeat 123 184 1.0E-7 T 22-04-2016 PNUC_RS04455 460a6b55555d7eb59c3f36ff8fa70eff 280 Gene3D G3DSA:1.25.40.10 166 257 1.9E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS04455 460a6b55555d7eb59c3f36ff8fa70eff 280 Gene3D G3DSA:1.25.40.10 120 165 7.0E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS04455 460a6b55555d7eb59c3f36ff8fa70eff 280 SUPERFAMILY SSF48452 123 257 5.46E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS01125 a05a15c94a959e68f047422e211691ff 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 1.4E-50 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PNUC_RS01125 a05a15c94a959e68f047422e211691ff 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 9.3E-19 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PNUC_RS01125 a05a15c94a959e68f047422e211691ff 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 9.3E-19 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PNUC_RS01125 a05a15c94a959e68f047422e211691ff 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 9.3E-19 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PNUC_RS01125 a05a15c94a959e68f047422e211691ff 154 PANTHER PTHR23151 1 154 3.1E-39 T 22-04-2016 PNUC_RS01125 a05a15c94a959e68f047422e211691ff 154 Gene3D G3DSA:2.40.50.100 78 153 2.4E-29 T 22-04-2016 PNUC_RS01125 a05a15c94a959e68f047422e211691ff 154 SUPERFAMILY SSF51230 81 153 4.06E-23 T 22-04-2016 IPR011053 Single hybrid motif PNUC_RS01125 a05a15c94a959e68f047422e211691ff 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 22-04-2016 IPR001882 Biotin-binding site PNUC_RS01125 a05a15c94a959e68f047422e211691ff 154 Pfam PF00364 Biotin-requiring enzyme 82 153 4.3E-23 T 22-04-2016 IPR000089 Biotin/lipoyl attachment PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 67 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 Gene3D G3DSA:3.10.290.10 341 409 1.9E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 SUPERFAMILY SSF55174 312 408 1.43E-17 T 22-04-2016 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 Gene3D G3DSA:3.40.50.620 20 242 2.8E-78 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 19 408 2.3E-117 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 13 409 46.712 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 PANTHER PTHR11766:SF1 19 409 2.2E-217 T 22-04-2016 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 SUPERFAMILY SSF52374 20 327 3.33E-88 T 22-04-2016 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 Gene3D G3DSA:1.10.240.10 243 340 2.0E-33 T 22-04-2016 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 Pfam PF00579 tRNA synthetases class I (W and Y) 46 329 9.1E-74 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 176 191 8.5E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 226 238 8.5E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 61 83 8.5E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 193 215 8.5E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 PANTHER PTHR11766 19 409 2.2E-217 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 PNUC_RS09755 51871604e3f4968b749014dd4790d437 410 SMART SM00363 349 410 0.0026 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS00495 acbec97353d223ea471818cf811d6c61 361 PANTHER PTHR21090 1 357 6.7E-185 T 22-04-2016 PNUC_RS00495 acbec97353d223ea471818cf811d6c61 361 PIRSF PIRSF001455 4 359 9.4E-109 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PNUC_RS00495 acbec97353d223ea471818cf811d6c61 361 Gene3D G3DSA:3.40.50.1970 3 173 1.9E-68 T 22-04-2016 PNUC_RS00495 acbec97353d223ea471818cf811d6c61 361 Pfam PF01761 3-dehydroquinate synthase 68 325 1.6E-106 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PNUC_RS00495 acbec97353d223ea471818cf811d6c61 361 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 348 1.2E-118 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PNUC_RS00495 acbec97353d223ea471818cf811d6c61 361 SUPERFAMILY SSF56796 5 344 2.49E-114 T 22-04-2016 PNUC_RS00495 acbec97353d223ea471818cf811d6c61 361 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 3 357 41.729 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PNUC_RS00495 acbec97353d223ea471818cf811d6c61 361 Gene3D G3DSA:1.20.1090.10 174 355 4.0E-65 T 22-04-2016 PNUC_RS10125 1f597c2098753986960c54b823ad3c0f 313 SUPERFAMILY SSF56059 123 310 4.71E-51 T 22-04-2016 PNUC_RS10125 1f597c2098753986960c54b823ad3c0f 313 SUPERFAMILY SSF52440 1 121 1.41E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS10125 1f597c2098753986960c54b823ad3c0f 313 PANTHER PTHR21621 1 310 2.3E-97 T 22-04-2016 PNUC_RS10125 1f597c2098753986960c54b823ad3c0f 313 Gene3D G3DSA:3.30.470.20 191 298 2.1E-42 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS10125 1f597c2098753986960c54b823ad3c0f 313 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 311 1.1E-113 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 PNUC_RS10125 1f597c2098753986960c54b823ad3c0f 313 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 8.4E-39 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 PNUC_RS10125 1f597c2098753986960c54b823ad3c0f 313 Hamap MF_00162 Glutathione synthetase [gshB]. 1 313 140.998 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 PNUC_RS10125 1f597c2098753986960c54b823ad3c0f 313 Gene3D G3DSA:3.40.50.20 1 128 1.4E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS10125 1f597c2098753986960c54b823ad3c0f 313 Gene3D G3DSA:3.30.1490.20 136 190 3.1E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PNUC_RS10125 1f597c2098753986960c54b823ad3c0f 313 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 295 4.2E-68 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 PNUC_RS10125 1f597c2098753986960c54b823ad3c0f 313 PANTHER PTHR21621:SF4 1 310 2.3E-97 T 22-04-2016 PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 PANTHER PTHR11624 794 880 0.0 T 22-04-2016 IPR033247 Transketolase family PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 PANTHER PTHR11624 479 541 0.0 T 22-04-2016 IPR033247 Transketolase family PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 PANTHER PTHR11624 368 457 0.0 T 22-04-2016 IPR033247 Transketolase family PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 PANTHER PTHR11624 82 300 0.0 T 22-04-2016 IPR033247 Transketolase family PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 PANTHER PTHR11624 559 775 0.0 T 22-04-2016 IPR033247 Transketolase family PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 111 301 1.5E-7 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 Gene3D G3DSA:3.40.50.970 65 473 1.9E-150 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 14 897 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 Gene3D G3DSA:3.40.50.920 713 897 7.1E-69 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 Gene3D G3DSA:3.40.50.970 477 710 3.7E-116 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 PANTHER PTHR11624:SF67 794 880 0.0 T 22-04-2016 PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 PANTHER PTHR11624:SF67 479 541 0.0 T 22-04-2016 PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 PANTHER PTHR11624:SF67 368 457 0.0 T 22-04-2016 PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 PANTHER PTHR11624:SF67 82 300 0.0 T 22-04-2016 PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 PANTHER PTHR11624:SF67 559 775 0.0 T 22-04-2016 PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 SUPERFAMILY SSF52518 65 472 4.89E-134 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 PIRSF PIRSF000156 5 898 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 SUPERFAMILY SSF52518 478 706 5.3E-95 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS03835 15df1d46af31e8ca416033a326734431 898 SUPERFAMILY SSF52922 707 897 6.73E-55 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PNUC_RS05025 e0ec65a403f5ff38cb0b65f11698d956 174 SUPERFAMILY SSF81324 72 156 6.41E-6 T 22-04-2016 PNUC_RS05025 e0ec65a403f5ff38cb0b65f11698d956 174 Gene3D G3DSA:1.10.287.70 28 56 2.3E-4 T 22-04-2016 PNUC_RS05025 e0ec65a403f5ff38cb0b65f11698d956 174 Gene3D G3DSA:1.10.287.70 100 155 2.3E-4 T 22-04-2016 PNUC_RS05025 e0ec65a403f5ff38cb0b65f11698d956 174 Pfam PF07885 Ion channel 88 148 1.8E-5 T 22-04-2016 IPR013099 Potassium channel domain PNUC_RS00410 cd8160b20fc88c468a531b87cb6dd06d 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 6.0E-28 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P PNUC_RS00410 cd8160b20fc88c468a531b87cb6dd06d 146 SUPERFAMILY SSF52080 4 142 1.44E-44 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P PNUC_RS00410 cd8160b20fc88c468a531b87cb6dd06d 146 Gene3D G3DSA:3.100.10.10 32 145 1.0E-24 T 22-04-2016 PNUC_RS00410 cd8160b20fc88c468a531b87cb6dd06d 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 19.706 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 PNUC_RS00410 cd8160b20fc88c468a531b87cb6dd06d 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 4.4E-48 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 PNUC_RS00410 cd8160b20fc88c468a531b87cb6dd06d 146 PANTHER PTHR12934 1 145 1.7E-59 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 PNUC_RS03390 08bd7085a2d94d64c007f976a665317d 258 PANTHER PTHR11767 35 250 2.6E-39 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 PNUC_RS03390 08bd7085a2d94d64c007f976a665317d 258 Gene3D G3DSA:2.60.40.1400 81 251 7.9E-43 T 22-04-2016 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic PNUC_RS03390 08bd7085a2d94d64c007f976a665317d 258 Gene3D G3DSA:1.10.287.70 1 80 2.8E-15 T 22-04-2016 PNUC_RS03390 08bd7085a2d94d64c007f976a665317d 258 SUPERFAMILY SSF81296 69 249 6.06E-50 T 22-04-2016 IPR014756 Immunoglobulin E-set PNUC_RS03390 08bd7085a2d94d64c007f976a665317d 258 SUPERFAMILY SSF81324 2 93 1.44E-16 T 22-04-2016 PNUC_RS03390 08bd7085a2d94d64c007f976a665317d 258 PANTHER PTHR11767:SF47 35 250 2.6E-39 T 22-04-2016 PNUC_RS03390 08bd7085a2d94d64c007f976a665317d 258 Pfam PF01007 Inward rectifier potassium channel 34 247 9.4E-32 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 SUPERFAMILY SSF54782 230 319 1.2E-21 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 16 222 2.1E-73 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 241 257 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 SUPERFAMILY SSF53850 15 229 3.45E-81 T 22-04-2016 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 Gene3D G3DSA:3.40.190.10 14 120 3.1E-46 T 22-04-2016 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 Gene3D G3DSA:3.30.160.40 232 316 5.8E-22 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 236 308 4.2E-13 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 16 310 2.6E-102 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 Gene3D G3DSA:3.40.190.10 121 209 1.5E-38 T 22-04-2016 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 PANTHER PTHR11557:SF0 2 316 1.7E-138 T 22-04-2016 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 PANTHER PTHR11557 2 316 1.7E-138 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 15 310 36.016 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 PRINTS PR00151 Porphobilinogen deaminase signature 153 170 2.1E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 PRINTS PR00151 Porphobilinogen deaminase signature 240 257 2.1E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 PRINTS PR00151 Porphobilinogen deaminase signature 86 105 2.1E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 PRINTS PR00151 Porphobilinogen deaminase signature 134 151 2.1E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 PRINTS PR00151 Porphobilinogen deaminase signature 55 75 2.1E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03420 1f0d3ce12786644c5162823f519f1655 321 PIRSF PIRSF001438 2 321 4.0E-113 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS10500 042c64f50efd5751459dc968d6f2c36e 221 Gene3D G3DSA:3.40.1050.10 4 211 2.5E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PNUC_RS10500 042c64f50efd5751459dc968d6f2c36e 221 PANTHER PTHR11002 7 213 2.3E-110 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PNUC_RS10500 042c64f50efd5751459dc968d6f2c36e 221 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 47 54 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PNUC_RS10500 042c64f50efd5751459dc968d6f2c36e 221 SMART SM00947 35 198 3.1E-65 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PNUC_RS10500 042c64f50efd5751459dc968d6f2c36e 221 Pfam PF00484 Carbonic anhydrase 42 194 3.6E-49 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PNUC_RS10500 042c64f50efd5751459dc968d6f2c36e 221 PANTHER PTHR11002:SF20 7 213 2.3E-110 T 22-04-2016 PNUC_RS10500 042c64f50efd5751459dc968d6f2c36e 221 SUPERFAMILY SSF53056 4 215 9.68E-75 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PNUC_RS01430 ad09f513f95f3526a6119e94b127e1d3 205 Pfam PF00677 Lumazine binding domain 3 85 1.8E-12 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01430 ad09f513f95f3526a6119e94b127e1d3 205 Pfam PF00677 Lumazine binding domain 98 190 6.1E-21 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01430 ad09f513f95f3526a6119e94b127e1d3 205 SUPERFAMILY SSF63380 1 91 2.38E-20 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PNUC_RS01430 ad09f513f95f3526a6119e94b127e1d3 205 PANTHER PTHR21098 1 201 1.2E-74 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01430 ad09f513f95f3526a6119e94b127e1d3 205 PIRSF PIRSF000498 1 205 1.6E-63 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01430 ad09f513f95f3526a6119e94b127e1d3 205 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 1.3E-56 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01430 ad09f513f95f3526a6119e94b127e1d3 205 SUPERFAMILY SSF63380 91 202 2.98E-28 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PNUC_RS01430 ad09f513f95f3526a6119e94b127e1d3 205 Gene3D G3DSA:2.40.30.20 5 102 1.5E-25 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS01430 ad09f513f95f3526a6119e94b127e1d3 205 Gene3D G3DSA:2.40.30.20 103 201 5.1E-28 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00955 87f2b168c1de79f4d9c3a5096610b236 152 Gene3D G3DSA:1.10.150.120 83 150 1.6E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PNUC_RS00955 87f2b168c1de79f4d9c3a5096610b236 152 SUPERFAMILY SSF54292 2 78 1.02E-22 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS00955 87f2b168c1de79f4d9c3a5096610b236 152 Gene3D G3DSA:3.10.20.30 2 76 3.7E-26 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS00955 87f2b168c1de79f4d9c3a5096610b236 152 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PNUC_RS00955 87f2b168c1de79f4d9c3a5096610b236 152 Pfam PF01799 [2Fe-2S] binding domain 74 145 1.3E-24 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PNUC_RS00955 87f2b168c1de79f4d9c3a5096610b236 152 SUPERFAMILY SSF47741 74 150 1.44E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PNUC_RS00955 87f2b168c1de79f4d9c3a5096610b236 152 PANTHER PTHR11908 1 134 6.7E-26 T 22-04-2016 PNUC_RS00955 87f2b168c1de79f4d9c3a5096610b236 152 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 58 2.9E-7 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS08115 9aeddac54ed50c12d7d47907b8187f27 383 SUPERFAMILY SSF47203 229 378 1.61E-57 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PNUC_RS08115 9aeddac54ed50c12d7d47907b8187f27 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PNUC_RS08115 9aeddac54ed50c12d7d47907b8187f27 383 PANTHER PTHR10909 4 380 4.9E-169 T 22-04-2016 PNUC_RS08115 9aeddac54ed50c12d7d47907b8187f27 383 Gene3D G3DSA:1.10.540.10 4 120 1.1E-40 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PNUC_RS08115 9aeddac54ed50c12d7d47907b8187f27 383 Gene3D G3DSA:2.40.110.10 122 217 9.3E-39 T 22-04-2016 PNUC_RS08115 9aeddac54ed50c12d7d47907b8187f27 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 1.6E-37 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PNUC_RS08115 9aeddac54ed50c12d7d47907b8187f27 383 PANTHER PTHR10909:SF10 4 380 4.9E-169 T 22-04-2016 PNUC_RS08115 9aeddac54ed50c12d7d47907b8187f27 383 PIRSF PIRSF016578 4 381 3.1E-27 T 22-04-2016 PNUC_RS08115 9aeddac54ed50c12d7d47907b8187f27 383 SUPERFAMILY SSF56645 5 243 1.96E-82 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PNUC_RS08115 9aeddac54ed50c12d7d47907b8187f27 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 2.4E-28 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PNUC_RS08115 9aeddac54ed50c12d7d47907b8187f27 383 Gene3D G3DSA:1.20.140.10 218 378 2.0E-69 T 22-04-2016 PNUC_RS08115 9aeddac54ed50c12d7d47907b8187f27 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 1.2E-50 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PNUC_RS06970 485419145ba7c8c9cb2fdd1fd9d2168e 637 Pfam PF02421 Ferrous iron transport protein B 15 173 2.4E-50 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 PNUC_RS06970 485419145ba7c8c9cb2fdd1fd9d2168e 637 Pfam PF07664 Ferrous iron transport protein B C terminus 416 469 9.4E-16 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 PNUC_RS06970 485419145ba7c8c9cb2fdd1fd9d2168e 637 Pfam PF07670 Nucleoside recognition 474 606 1.4E-25 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 PNUC_RS06970 485419145ba7c8c9cb2fdd1fd9d2168e 637 Pfam PF07670 Nucleoside recognition 306 396 6.1E-11 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 PNUC_RS06970 485419145ba7c8c9cb2fdd1fd9d2168e 637 PANTHER PTHR11649 10 161 4.4E-217 T 22-04-2016 PNUC_RS06970 485419145ba7c8c9cb2fdd1fd9d2168e 637 PANTHER PTHR11649 220 634 4.4E-217 T 22-04-2016 PNUC_RS06970 485419145ba7c8c9cb2fdd1fd9d2168e 637 Gene3D G3DSA:3.40.50.300 12 177 8.6E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06970 485419145ba7c8c9cb2fdd1fd9d2168e 637 PANTHER PTHR11649:SF37 10 161 4.4E-217 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PNUC_RS06970 485419145ba7c8c9cb2fdd1fd9d2168e 637 PANTHER PTHR11649:SF37 220 634 4.4E-217 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PNUC_RS06970 485419145ba7c8c9cb2fdd1fd9d2168e 637 SUPERFAMILY SSF52540 10 177 1.41E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06970 485419145ba7c8c9cb2fdd1fd9d2168e 637 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 15 35 1.3E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS06970 485419145ba7c8c9cb2fdd1fd9d2168e 637 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 36 54 1.3E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 88 165 1.8E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 Gene3D G3DSA:3.10.50.30 85 165 1.7E-25 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 129 145 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 166 51.351 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 SUPERFAMILY SSF46557 4 78 2.22E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 2.5E-21 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 164 23.432 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 PANTHER PTHR30437 1 165 2.6E-55 T 22-04-2016 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 Gene3D G3DSA:1.10.287.180 3 76 5.2E-21 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 PANTHER PTHR30437:SF6 1 165 2.6E-55 T 22-04-2016 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 165 7.0E-60 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 PIRSF PIRSF006092 1 166 5.5E-41 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PNUC_RS05615 6ed57082639fdbf2aa1af2ce70958052 166 SUPERFAMILY SSF54534 87 165 1.14E-17 T 22-04-2016 PNUC_RS08325 587cc3d4e8f728ffa4c2b21d3399c5fc 237 Pfam PF00072 Response regulator receiver domain 5 117 3.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS08325 587cc3d4e8f728ffa4c2b21d3399c5fc 237 PANTHER PTHR26402:SF576 3 230 2.0E-104 T 22-04-2016 PNUC_RS08325 587cc3d4e8f728ffa4c2b21d3399c5fc 237 PANTHER PTHR26402 3 230 2.0E-104 T 22-04-2016 PNUC_RS08325 587cc3d4e8f728ffa4c2b21d3399c5fc 237 SUPERFAMILY SSF46894 128 230 7.09E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PNUC_RS08325 587cc3d4e8f728ffa4c2b21d3399c5fc 237 SMART SM00448 3 116 4.9E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS08325 587cc3d4e8f728ffa4c2b21d3399c5fc 237 SUPERFAMILY SSF52172 2 127 3.7E-39 T 22-04-2016 IPR011006 CheY-like superfamily PNUC_RS08325 587cc3d4e8f728ffa4c2b21d3399c5fc 237 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 230 1.6E-97 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 PNUC_RS08325 587cc3d4e8f728ffa4c2b21d3399c5fc 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 1.5E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PNUC_RS08325 587cc3d4e8f728ffa4c2b21d3399c5fc 237 Gene3D G3DSA:3.40.50.2300 2 125 2.8E-38 T 22-04-2016 PNUC_RS08325 587cc3d4e8f728ffa4c2b21d3399c5fc 237 Gene3D G3DSA:1.10.10.10 130 232 7.7E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08325 587cc3d4e8f728ffa4c2b21d3399c5fc 237 SMART SM00862 155 230 1.2E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PNUC_RS08785 04343a5bc58b3f17e9fffa429d65882e 190 Pfam PF00589 Phage integrase family 5 179 1.5E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS08785 04343a5bc58b3f17e9fffa429d65882e 190 PANTHER PTHR30349:SF20 5 190 1.5E-24 T 22-04-2016 PNUC_RS08785 04343a5bc58b3f17e9fffa429d65882e 190 PANTHER PTHR30349 5 190 1.5E-24 T 22-04-2016 PNUC_RS08785 04343a5bc58b3f17e9fffa429d65882e 190 SUPERFAMILY SSF56349 2 189 2.47E-38 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PNUC_RS08785 04343a5bc58b3f17e9fffa429d65882e 190 Gene3D G3DSA:1.10.443.10 6 187 9.3E-35 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS02460 0959af738049024cbf85c0f8e85a1265 309 Gene3D G3DSA:3.40.50.720 111 277 5.6E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02460 0959af738049024cbf85c0f8e85a1265 309 SUPERFAMILY SSF52283 40 131 5.1E-23 T 22-04-2016 PNUC_RS02460 0959af738049024cbf85c0f8e85a1265 309 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 41 308 6.6E-23 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PNUC_RS02460 0959af738049024cbf85c0f8e85a1265 309 PANTHER PTHR10996 41 308 3.0E-109 T 22-04-2016 PNUC_RS02460 0959af738049024cbf85c0f8e85a1265 309 Gene3D G3DSA:3.40.50.720 41 110 3.2E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02460 0959af738049024cbf85c0f8e85a1265 309 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 276 5.9E-55 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PNUC_RS02460 0959af738049024cbf85c0f8e85a1265 309 SUPERFAMILY SSF51735 99 276 4.01E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10065 0f3d2f1d0793bb2a26585289eb10879c 247 SUPERFAMILY SSF53271 65 242 2.62E-22 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS10065 0f3d2f1d0793bb2a26585289eb10879c 247 PANTHER PTHR11907:SF9 15 246 1.7E-30 T 22-04-2016 PNUC_RS10065 0f3d2f1d0793bb2a26585289eb10879c 247 PANTHER PTHR11907 15 246 1.7E-30 T 22-04-2016 PNUC_RS10065 0f3d2f1d0793bb2a26585289eb10879c 247 Pfam PF00156 Phosphoribosyl transferase domain 202 241 1.2E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PNUC_RS10065 0f3d2f1d0793bb2a26585289eb10879c 247 Gene3D G3DSA:3.40.50.2020 63 245 1.1E-18 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS08655 dfc6537b48aefd942da24b1229f2b214 175 SUPERFAMILY SSF55729 5 164 1.18E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS08655 dfc6537b48aefd942da24b1229f2b214 175 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 2.4E-24 T 22-04-2016 IPR000182 GNAT domain GO:0008080 PNUC_RS08655 dfc6537b48aefd942da24b1229f2b214 175 Gene3D G3DSA:3.40.630.30 5 165 6.2E-47 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS08655 dfc6537b48aefd942da24b1229f2b214 175 PANTHER PTHR13256:SF21 7 173 8.6E-67 T 22-04-2016 PNUC_RS08655 dfc6537b48aefd942da24b1229f2b214 175 PANTHER PTHR13256 7 173 8.6E-67 T 22-04-2016 PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 SUPERFAMILY SSF52518 313 499 2.95E-58 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 PANTHER PTHR11624 234 632 1.3E-295 T 22-04-2016 IPR033247 Transketolase family PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 PANTHER PTHR11624 16 211 1.3E-295 T 22-04-2016 IPR033247 Transketolase family PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 619 6.5E-260 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 SUPERFAMILY SSF52922 487 619 3.93E-29 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 SMART SM00861 315 479 1.8E-69 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 ProSitePatterns PS00802 Transketolase signature 2. 421 437 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 621 45.817 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 Pfam PF02779 Transketolase, pyrimidine binding domain 315 474 4.4E-40 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 PANTHER PTHR11624:SF20 234 632 1.3E-295 T 22-04-2016 PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 PANTHER PTHR11624:SF20 16 211 1.3E-295 T 22-04-2016 PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 Gene3D G3DSA:3.40.50.970 4 183 3.6E-41 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 Gene3D G3DSA:3.40.50.970 225 298 3.6E-41 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 Pfam PF02780 Transketolase, C-terminal domain 503 611 4.6E-23 T 22-04-2016 IPR033248 Transketolase, C-terminal domain PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 Gene3D G3DSA:3.40.50.970 299 483 1.7E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 SUPERFAMILY SSF52518 4 192 2.6E-83 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 3 279 3.1E-120 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 Gene3D G3DSA:3.40.50.920 490 618 4.6E-31 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PNUC_RS08865 61558c3d61b6078d1882f54d5eb2905b 633 SUPERFAMILY SSF52518 236 377 2.6E-83 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS06875 3e0ecf0868480579c9c08908cfcef2b9 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 429 1.0E-70 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PNUC_RS06875 3e0ecf0868480579c9c08908cfcef2b9 463 PANTHER PTHR11206 8 458 1.8E-87 T 22-04-2016 PNUC_RS06875 3e0ecf0868480579c9c08908cfcef2b9 463 Pfam PF01554 MatE 22 180 5.7E-26 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PNUC_RS06875 3e0ecf0868480579c9c08908cfcef2b9 463 Pfam PF01554 MatE 248 408 3.0E-28 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PNUC_RS06875 3e0ecf0868480579c9c08908cfcef2b9 463 PIRSF PIRSF006603 10 459 4.1E-57 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PNUC_RS06875 3e0ecf0868480579c9c08908cfcef2b9 463 PANTHER PTHR11206:SF153 8 458 1.8E-87 T 22-04-2016 PNUC_RS06265 3a2d3b94ece58834645478b209b33a2a 198 Gene3D G3DSA:3.30.70.790 82 152 1.5E-28 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 PNUC_RS06265 3a2d3b94ece58834645478b209b33a2a 198 Hamap MF_00822 Urease accessory protein UreE [ureE]. 5 148 22.87 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 PNUC_RS06265 3a2d3b94ece58834645478b209b33a2a 198 Pfam PF02814 UreE urease accessory protein, N-terminal domain 17 74 6.6E-17 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal PNUC_RS06265 3a2d3b94ece58834645478b209b33a2a 198 SUPERFAMILY SSF69737 81 147 1.57E-19 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 PNUC_RS06265 3a2d3b94ece58834645478b209b33a2a 198 Pfam PF05194 UreE urease accessory protein, C-terminal domain 81 196 4.4E-20 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 PNUC_RS06265 3a2d3b94ece58834645478b209b33a2a 198 SMART SM00988 10 74 5.3E-18 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal PNUC_RS06265 3a2d3b94ece58834645478b209b33a2a 198 SUPERFAMILY SSF69287 23 79 4.58E-13 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal PNUC_RS06265 3a2d3b94ece58834645478b209b33a2a 198 Gene3D G3DSA:2.60.260.20 27 80 3.0E-16 T 22-04-2016 PNUC_RS03985 a313930c5d87100cc049622391057834 469 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PANTHER PTHR11670 1 307 6.1E-291 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PANTHER PTHR11670 327 468 6.1E-291 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 SUPERFAMILY SSF53732 1 468 1.11E-165 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 460 6.1E-156 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 468 8.4E-239 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 Gene3D G3DSA:3.40.1060.10 153 289 4.0E-40 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PANTHER PTHR11670:SF38 1 307 6.1E-291 T 22-04-2016 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PANTHER PTHR11670:SF38 327 468 6.1E-291 T 22-04-2016 PNUC_RS03985 a313930c5d87100cc049622391057834 469 Gene3D G3DSA:3.30.499.10 335 468 3.7E-62 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 Gene3D G3DSA:3.30.499.10 294 303 3.7E-62 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 Gene3D G3DSA:3.30.499.10 4 152 9.2E-22 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PRINTS PR00415 Aconitase family signature 402 415 7.5E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PRINTS PR00415 Aconitase family signature 343 354 7.5E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PRINTS PR00415 Aconitase family signature 82 95 7.5E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PRINTS PR00415 Aconitase family signature 119 132 7.5E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PRINTS PR00415 Aconitase family signature 286 300 7.5E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PRINTS PR00415 Aconitase family signature 133 148 7.5E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PRINTS PR00415 Aconitase family signature 108 116 7.5E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PRINTS PR00415 Aconitase family signature 195 208 7.5E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 PRINTS PR00415 Aconitase family signature 209 222 7.5E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03985 a313930c5d87100cc049622391057834 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 469 60.769 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS09325 f1690730daf200450f2d3c7f76f4b7a6 370 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 15 369 38.405 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 PNUC_RS09325 f1690730daf200450f2d3c7f76f4b7a6 370 SUPERFAMILY SSF52402 14 252 5.51E-55 T 22-04-2016 PNUC_RS09325 f1690730daf200450f2d3c7f76f4b7a6 370 Gene3D G3DSA:2.40.30.10 291 369 9.6E-24 T 22-04-2016 PNUC_RS09325 f1690730daf200450f2d3c7f76f4b7a6 370 Pfam PF03054 tRNA methyl transferase 15 368 1.8E-130 T 22-04-2016 PNUC_RS09325 f1690730daf200450f2d3c7f76f4b7a6 370 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 15 368 1.9E-126 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 PNUC_RS09325 f1690730daf200450f2d3c7f76f4b7a6 370 Gene3D G3DSA:3.40.50.620 12 219 3.9E-96 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS09325 f1690730daf200450f2d3c7f76f4b7a6 370 Gene3D G3DSA:2.30.30.280 221 289 2.6E-30 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 PNUC_RS09325 f1690730daf200450f2d3c7f76f4b7a6 370 PANTHER PTHR11933:SF10 1 368 1.6E-181 T 22-04-2016 PNUC_RS09325 f1690730daf200450f2d3c7f76f4b7a6 370 PANTHER PTHR11933 1 368 1.6E-181 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 PNUC_RS01660 040ceb6648ba6b1d52cd0758e25ce81c 360 Pfam PF00953 Glycosyl transferase family 4 79 232 9.5E-31 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS01660 040ceb6648ba6b1d52cd0758e25ce81c 360 PANTHER PTHR22926 1 360 7.5E-76 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS01660 040ceb6648ba6b1d52cd0758e25ce81c 360 PANTHER PTHR22926:SF7 1 360 7.5E-76 T 22-04-2016 PNUC_RS10425 0a77222384e9ae436b0891bef8fb8a66 353 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 259 352 4.8E-22 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PNUC_RS10425 0a77222384e9ae436b0891bef8fb8a66 353 Gene3D G3DSA:3.40.50.300 4 205 5.4E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS10425 0a77222384e9ae436b0891bef8fb8a66 353 SUPERFAMILY SSF90002 259 352 4.05E-26 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PNUC_RS10425 0a77222384e9ae436b0891bef8fb8a66 353 Gene3D G3DSA:3.30.1220.10 241 353 6.2E-34 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PNUC_RS10425 0a77222384e9ae436b0891bef8fb8a66 353 SMART SM00833 259 352 1.1E-16 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PNUC_RS10425 0a77222384e9ae436b0891bef8fb8a66 353 PANTHER PTHR13748:SF43 4 212 3.3E-125 T 22-04-2016 PNUC_RS10425 0a77222384e9ae436b0891bef8fb8a66 353 PANTHER PTHR13748:SF43 229 353 3.3E-125 T 22-04-2016 PNUC_RS10425 0a77222384e9ae436b0891bef8fb8a66 353 SUPERFAMILY SSF52540 4 205 1.34E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS10425 0a77222384e9ae436b0891bef8fb8a66 353 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 185 9.4E-56 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PNUC_RS10425 0a77222384e9ae436b0891bef8fb8a66 353 PANTHER PTHR13748 4 212 3.3E-125 T 22-04-2016 PNUC_RS10425 0a77222384e9ae436b0891bef8fb8a66 353 PANTHER PTHR13748 229 353 3.3E-125 T 22-04-2016 PNUC_RS07870 4e9fdc37e6f3128ea8688f8c0396dfe1 432 SUPERFAMILY SSF51621 8 431 2.42E-154 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS07870 4e9fdc37e6f3128ea8688f8c0396dfe1 432 PIRSF PIRSF001362 1 432 2.1E-225 T 22-04-2016 PNUC_RS07870 4e9fdc37e6f3128ea8688f8c0396dfe1 432 ProSitePatterns PS00161 Isocitrate lyase signature. 191 196 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 PNUC_RS07870 4e9fdc37e6f3128ea8688f8c0396dfe1 432 Gene3D G3DSA:3.20.20.60 9 414 3.2E-166 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS07870 4e9fdc37e6f3128ea8688f8c0396dfe1 432 PANTHER PTHR21631 6 432 2.3E-173 T 22-04-2016 PNUC_RS07870 4e9fdc37e6f3128ea8688f8c0396dfe1 432 Pfam PF00463 Isocitrate lyase family 255 431 4.8E-49 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 PNUC_RS07870 4e9fdc37e6f3128ea8688f8c0396dfe1 432 Pfam PF00463 Isocitrate lyase family 8 254 7.3E-59 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 PNUC_RS07870 4e9fdc37e6f3128ea8688f8c0396dfe1 432 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 254 431 2.9E-87 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 PNUC_RS07870 4e9fdc37e6f3128ea8688f8c0396dfe1 432 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 255 6.6E-105 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 PNUC_RS03545 c7b9d6c97e1acb367ce7f8f0d9af44f3 150 PANTHER PTHR36302 7 149 1.0E-34 T 22-04-2016 PNUC_RS03545 c7b9d6c97e1acb367ce7f8f0d9af44f3 150 Pfam PF04314 Protein of unknown function (DUF461) 33 139 4.2E-39 T 22-04-2016 IPR007410 DR1885-like metal-binding protein PNUC_RS03545 c7b9d6c97e1acb367ce7f8f0d9af44f3 150 SUPERFAMILY SSF110087 8 148 1.44E-47 T 22-04-2016 IPR007410 DR1885-like metal-binding protein PNUC_RS03545 c7b9d6c97e1acb367ce7f8f0d9af44f3 150 PANTHER PTHR36302:SF1 7 149 1.0E-34 T 22-04-2016 PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 Pfam PF00009 Elongation factor Tu GTP binding domain 8 204 4.1E-35 T 22-04-2016 PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 PANTHER PTHR23115 16 443 1.7E-53 T 22-04-2016 PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 Gene3D G3DSA:2.40.30.10 340 443 1.9E-9 T 22-04-2016 PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 11 441 2.1E-151 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 Gene3D G3DSA:2.40.30.10 235 332 4.1E-16 T 22-04-2016 PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 66 81 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 SUPERFAMILY SSF50465 340 442 3.69E-29 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 PRINTS PR00315 GTP-binding elongation factor signature 73 81 3.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 PRINTS PR00315 GTP-binding elongation factor signature 154 163 3.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 PRINTS PR00315 GTP-binding elongation factor signature 11 24 3.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 PRINTS PR00315 GTP-binding elongation factor signature 109 120 3.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 PRINTS PR00315 GTP-binding elongation factor signature 93 103 3.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 Gene3D G3DSA:3.40.50.300 3 225 2.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 SUPERFAMILY SSF52540 2 226 2.44E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 PANTHER PTHR23115:SF170 16 443 1.7E-53 T 22-04-2016 PNUC_RS07755 e09602aaf1145a974dcb9356ed5ee496 447 SUPERFAMILY SSF50447 235 333 1.33E-13 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS07490 c052edf32aa6d31e9dc6c6861f40ae2d 177 Pfam PF13518 Helix-turn-helix domain 63 116 8.7E-12 T 22-04-2016 PNUC_RS07490 c052edf32aa6d31e9dc6c6861f40ae2d 177 PANTHER PTHR33795:SF1 1 174 5.3E-38 T 22-04-2016 PNUC_RS07490 c052edf32aa6d31e9dc6c6861f40ae2d 177 PANTHER PTHR33795 1 174 5.3E-38 T 22-04-2016 PNUC_RS07490 c052edf32aa6d31e9dc6c6861f40ae2d 177 SUPERFAMILY SSF48295 57 118 5.23E-14 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 PNUC_RS07490 c052edf32aa6d31e9dc6c6861f40ae2d 177 SUPERFAMILY SSF46689 1 52 4.66E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS07490 c052edf32aa6d31e9dc6c6861f40ae2d 177 Gene3D G3DSA:1.10.10.60 5 55 2.7E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS07490 c052edf32aa6d31e9dc6c6861f40ae2d 177 Gene3D G3DSA:1.10.10.60 63 159 2.1E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS01565 c052edf32aa6d31e9dc6c6861f40ae2d 177 Pfam PF13518 Helix-turn-helix domain 63 116 8.7E-12 T 22-04-2016 PNUC_RS01565 c052edf32aa6d31e9dc6c6861f40ae2d 177 PANTHER PTHR33795:SF1 1 174 5.3E-38 T 22-04-2016 PNUC_RS01565 c052edf32aa6d31e9dc6c6861f40ae2d 177 PANTHER PTHR33795 1 174 5.3E-38 T 22-04-2016 PNUC_RS01565 c052edf32aa6d31e9dc6c6861f40ae2d 177 SUPERFAMILY SSF48295 57 118 5.23E-14 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 PNUC_RS01565 c052edf32aa6d31e9dc6c6861f40ae2d 177 SUPERFAMILY SSF46689 1 52 4.66E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS01565 c052edf32aa6d31e9dc6c6861f40ae2d 177 Gene3D G3DSA:1.10.10.60 5 55 2.7E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS01565 c052edf32aa6d31e9dc6c6861f40ae2d 177 Gene3D G3DSA:1.10.10.60 63 159 2.1E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS04085 b4fcea9a269ad48d20c85bd592e648de 163 Gene3D G3DSA:3.30.1330.60 55 161 1.1E-29 T 22-04-2016 IPR006665 OmpA-like domain PNUC_RS04085 b4fcea9a269ad48d20c85bd592e648de 163 SUPERFAMILY SSF103088 49 161 5.23E-29 T 22-04-2016 IPR006665 OmpA-like domain PNUC_RS04085 b4fcea9a269ad48d20c85bd592e648de 163 PRINTS PR01021 OMPA domain signature 107 123 1.35E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PNUC_RS04085 b4fcea9a269ad48d20c85bd592e648de 163 PRINTS PR01021 OMPA domain signature 92 107 1.35E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PNUC_RS04085 b4fcea9a269ad48d20c85bd592e648de 163 PRINTS PR01021 OMPA domain signature 60 82 1.35E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PNUC_RS04085 b4fcea9a269ad48d20c85bd592e648de 163 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 57 162 2.6E-38 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 PNUC_RS04085 b4fcea9a269ad48d20c85bd592e648de 163 Pfam PF00691 OmpA family 59 156 1.4E-21 T 22-04-2016 IPR006665 OmpA-like domain PNUC_RS04085 b4fcea9a269ad48d20c85bd592e648de 163 PANTHER PTHR30128:SF18 56 163 3.3E-41 T 22-04-2016 PNUC_RS04085 b4fcea9a269ad48d20c85bd592e648de 163 PANTHER PTHR30128 56 163 3.3E-41 T 22-04-2016 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 56.643 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 567 6.3E-295 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 PANTHER PTHR22642:SF7 19 296 6.7E-259 T 22-04-2016 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 PANTHER PTHR22642:SF7 320 501 6.7E-259 T 22-04-2016 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 SUPERFAMILY SSF51556 481 567 9.32E-203 T 22-04-2016 IPR032466 Metal-dependent hydrolase PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 SUPERFAMILY SSF51556 129 432 9.32E-203 T 22-04-2016 IPR032466 Metal-dependent hydrolase PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 PANTHER PTHR22642 19 296 6.7E-259 T 22-04-2016 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 PANTHER PTHR22642 320 501 6.7E-259 T 22-04-2016 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 SUPERFAMILY SSF51338 1 177 6.05E-63 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 1.0E-55 T 22-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 5.1E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 5.1E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 5.1E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 5.1E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 SUPERFAMILY SSF51338 422 477 8.2E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 Gene3D G3DSA:2.30.40.10 67 136 1.2E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 22-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 Gene3D G3DSA:3.20.20.140 137 429 2.3E-215 T 22-04-2016 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 Gene3D G3DSA:3.20.20.140 488 565 2.3E-215 T 22-04-2016 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 22-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06270 5215e268a771c2d9ccb1f99087a1e8ab 567 Pfam PF01979 Amidohydrolase family 125 450 5.6E-81 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PNUC_RS06795 32af6c97bea8679b60544af00a478e23 273 Gene3D G3DSA:3.30.420.10 4 224 2.3E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS06795 32af6c97bea8679b60544af00a478e23 273 SUPERFAMILY SSF53098 3 235 1.92E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS06795 32af6c97bea8679b60544af00a478e23 273 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 267 7.0E-92 T 22-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like PNUC_RS00675 98f48da14257188dd44c45b72be8ac9f 140 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 139 3.1E-41 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PNUC_RS00675 98f48da14257188dd44c45b72be8ac9f 140 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site PNUC_RS00675 98f48da14257188dd44c45b72be8ac9f 140 PANTHER PTHR30266 1 140 1.4E-43 T 22-04-2016 PNUC_RS00675 98f48da14257188dd44c45b72be8ac9f 140 SUPERFAMILY SSF81330 13 135 1.96E-33 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PNUC_RS00675 98f48da14257188dd44c45b72be8ac9f 140 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 139 4.5E-34 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PNUC_RS00675 98f48da14257188dd44c45b72be8ac9f 140 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 104 113 3.3E-11 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PNUC_RS00675 98f48da14257188dd44c45b72be8ac9f 140 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.3E-11 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PNUC_RS00675 98f48da14257188dd44c45b72be8ac9f 140 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 95 103 3.3E-11 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PNUC_RS00675 98f48da14257188dd44c45b72be8ac9f 140 PANTHER PTHR30266:SF2 1 140 1.4E-43 T 22-04-2016 PNUC_RS00265 abbc86bde8b6a43e7a48a4b679b142e8 233 PANTHER PTHR23105 10 229 5.4E-75 T 22-04-2016 PNUC_RS00265 abbc86bde8b6a43e7a48a4b679b142e8 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.4E-104 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PNUC_RS00265 abbc86bde8b6a43e7a48a4b679b142e8 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site PNUC_RS00265 abbc86bde8b6a43e7a48a4b679b142e8 233 Gene3D G3DSA:3.30.190.20 16 68 2.7E-45 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 PNUC_RS00265 abbc86bde8b6a43e7a48a4b679b142e8 233 Gene3D G3DSA:3.30.190.20 161 225 2.7E-45 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 PNUC_RS00265 abbc86bde8b6a43e7a48a4b679b142e8 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.953 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PNUC_RS00265 abbc86bde8b6a43e7a48a4b679b142e8 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 4.8E-49 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PNUC_RS00265 abbc86bde8b6a43e7a48a4b679b142e8 233 SUPERFAMILY SSF56808 6 225 3.01E-81 T 22-04-2016 IPR023674 Ribosomal protein L1-like PNUC_RS00265 abbc86bde8b6a43e7a48a4b679b142e8 233 PANTHER PTHR23105:SF5 10 229 5.4E-75 T 22-04-2016 PNUC_RS00265 abbc86bde8b6a43e7a48a4b679b142e8 233 Gene3D G3DSA:3.40.50.790 69 159 4.6E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PNUC_RS00265 abbc86bde8b6a43e7a48a4b679b142e8 233 PIRSF PIRSF002155 1 227 7.7E-78 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 PNUC_RS00315 dbb62363c21a9d4a0775490040fa03b1 218 ProSitePatterns PS00474 Ribosomal protein L3 signature. 105 128 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site PNUC_RS00315 dbb62363c21a9d4a0775490040fa03b1 218 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 1.2E-79 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00315 dbb62363c21a9d4a0775490040fa03b1 218 SUPERFAMILY SSF50447 2 216 4.15E-72 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS00315 dbb62363c21a9d4a0775490040fa03b1 218 PANTHER PTHR11229 4 216 6.9E-97 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00315 dbb62363c21a9d4a0775490040fa03b1 218 Pfam PF00297 Ribosomal protein L3 52 187 3.9E-14 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00315 dbb62363c21a9d4a0775490040fa03b1 218 Gene3D G3DSA:4.10.960.10 79 161 6.4E-26 T 22-04-2016 PNUC_RS00315 dbb62363c21a9d4a0775490040fa03b1 218 Gene3D G3DSA:2.40.30.10 4 33 2.9E-7 T 22-04-2016 PNUC_RS00315 dbb62363c21a9d4a0775490040fa03b1 218 Gene3D G3DSA:2.40.30.10 162 212 2.9E-7 T 22-04-2016 PNUC_RS00315 dbb62363c21a9d4a0775490040fa03b1 218 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 211 36.363 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS03500 b57c98af91b4b11590e395432ff11165 777 Pfam PF00005 ABC transporter 523 671 2.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS03500 b57c98af91b4b11590e395432ff11165 777 PANTHER PTHR24221 158 764 5.5E-227 T 22-04-2016 PNUC_RS03500 b57c98af91b4b11590e395432ff11165 777 SUPERFAMILY SSF90123 172 493 2.35E-74 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PNUC_RS03500 b57c98af91b4b11590e395432ff11165 777 SUPERFAMILY SSF52540 498 741 7.5E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03500 b57c98af91b4b11590e395432ff11165 777 Gene3D G3DSA:3.40.50.300 507 736 1.5E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03500 b57c98af91b4b11590e395432ff11165 777 ProSitePatterns PS00211 ABC transporters family signature. 643 657 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS03500 b57c98af91b4b11590e395432ff11165 777 Pfam PF00664 ABC transporter transmembrane region 184 455 3.8E-39 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PNUC_RS03500 b57c98af91b4b11590e395432ff11165 777 Gene3D G3DSA:1.20.1560.10 172 486 6.8E-78 T 22-04-2016 PNUC_RS03500 b57c98af91b4b11590e395432ff11165 777 SMART SM00382 531 717 4.5E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS06635 b7a3fea8f489b852c63906b2579f596f 325 ProSitePatterns PS01054 Transaldolase signature 1. 37 45 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PNUC_RS06635 b7a3fea8f489b852c63906b2579f596f 325 PANTHER PTHR10683:SF18 1 325 4.5E-164 T 22-04-2016 PNUC_RS06635 b7a3fea8f489b852c63906b2579f596f 325 Hamap MF_00492 Transaldolase [tal]. 8 325 46.393 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PNUC_RS06635 b7a3fea8f489b852c63906b2579f596f 325 SUPERFAMILY SSF51569 8 324 1.88E-106 T 22-04-2016 PNUC_RS06635 b7a3fea8f489b852c63906b2579f596f 325 Gene3D G3DSA:3.20.20.70 9 324 2.5E-119 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS06635 b7a3fea8f489b852c63906b2579f596f 325 Pfam PF00923 Transaldolase 20 322 8.2E-93 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PNUC_RS06635 b7a3fea8f489b852c63906b2579f596f 325 TIGRFAM TIGR00874 talAB: transaldolase 9 324 1.5E-134 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PNUC_RS06635 b7a3fea8f489b852c63906b2579f596f 325 PANTHER PTHR10683 1 325 4.5E-164 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PNUC_RS06635 b7a3fea8f489b852c63906b2579f596f 325 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 Gene3D G3DSA:1.25.40.10 7 181 4.6E-41 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 PANTHER PTHR23083 7 309 2.3E-65 T 22-04-2016 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 PANTHER PTHR23083 713 750 2.3E-65 T 22-04-2016 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 Gene3D G3DSA:1.25.40.10 242 310 3.7E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 SUPERFAMILY SSF48452 7 174 6.83E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 Pfam PF13432 Tetratricopeptide repeat 12 72 0.014 T 22-04-2016 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 Pfam PF13432 Tetratricopeptide repeat 225 267 5.8E-4 T 22-04-2016 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 Gene3D G3DSA:1.25.40.10 182 241 3.1E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 SUPERFAMILY SSF53756 458 667 7.33E-11 T 22-04-2016 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 SUPERFAMILY SSF48439 123 328 1.23E-48 T 22-04-2016 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 SMART SM00028 277 310 4.0E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 SMART SM00028 107 140 1.4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 SMART SM00028 175 208 1.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 SMART SM00028 209 242 2.8E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 SMART SM00028 73 106 0.025 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 SMART SM00028 5 38 240.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 SMART SM00028 243 276 0.0019 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 SMART SM00028 141 174 3.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 SMART SM00028 39 72 0.31 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 Pfam PF00515 Tetratricopeptide repeat 278 309 7.5E-8 T 22-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 Pfam PF14559 Tetratricopeptide repeat 87 139 1.6E-5 T 22-04-2016 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 Pfam PF13844 Glycosyl transferase family 41 551 746 7.1E-45 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 Pfam PF13844 Glycosyl transferase family 41 393 542 7.4E-34 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 PNUC_RS09480 47a7d63b521a983b5f65ccad917649fb 761 Pfam PF13414 TPR repeat 184 222 8.7E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09155 ba5b02e52e9e068b10e9bccfd02f6ded 329 Pfam PF01594 Domain of unknown function DUF20 3 315 1.2E-53 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like PNUC_RS09155 ba5b02e52e9e068b10e9bccfd02f6ded 329 PANTHER PTHR21716 1 318 1.8E-55 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 Gene3D G3DSA:3.40.50.300 94 382 1.7E-116 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 SUPERFAMILY SSF50615 10 94 1.88E-29 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 SUPERFAMILY SSF47917 383 510 2.62E-46 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.5E-75 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 PANTHER PTHR15184:SF3 1 497 4.3E-294 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 PANTHER PTHR15184 1 497 4.3E-294 T 22-04-2016 PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 506 3.6E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 PIRSF PIRSF039088 1 513 3.0E-239 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 510 5.7E-250 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 SUPERFAMILY SSF52540 96 381 3.25E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 Gene3D G3DSA:1.20.150.20 383 510 2.7E-48 T 22-04-2016 PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.616 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 2.2E-16 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS00120 fea24050e42ec60d0dac6ac22d96d49a 513 Gene3D G3DSA:2.40.30.20 1 93 1.8E-34 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PNUC_RS08500 0d549d7c71cc71e781062f269aeb9673 425 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 257 417 2.9E-44 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain PNUC_RS08500 0d549d7c71cc71e781062f269aeb9673 425 SUPERFAMILY SSF142764 5 424 4.84E-129 T 22-04-2016 PNUC_RS08500 0d549d7c71cc71e781062f269aeb9673 425 Pfam PF07005 Putative sugar-binding N-terminal domain 5 229 2.9E-68 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain PNUC_RS08500 0d549d7c71cc71e781062f269aeb9673 425 PANTHER PTHR30304:SF3 129 425 2.0E-85 T 22-04-2016 PNUC_RS08500 0d549d7c71cc71e781062f269aeb9673 425 PANTHER PTHR30304 129 425 2.0E-85 T 22-04-2016 PNUC_RS10085 c4d3874fb1651d3abb580803772c334c 84 SUPERFAMILY SSF52833 1 83 2.52E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS10085 c4d3874fb1651d3abb580803772c334c 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 PNUC_RS10085 c4d3874fb1651d3abb580803772c334c 84 Pfam PF00462 Glutaredoxin 4 64 1.3E-17 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PNUC_RS10085 c4d3874fb1651d3abb580803772c334c 84 Gene3D G3DSA:3.40.30.10 1 80 2.1E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS10085 c4d3874fb1651d3abb580803772c334c 84 PRINTS PR00160 Glutaredoxin signature 47 60 5.9E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup PNUC_RS10085 c4d3874fb1651d3abb580803772c334c 84 PRINTS PR00160 Glutaredoxin signature 4 22 5.9E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup PNUC_RS10085 c4d3874fb1651d3abb580803772c334c 84 PRINTS PR00160 Glutaredoxin signature 61 74 5.9E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup PNUC_RS10085 c4d3874fb1651d3abb580803772c334c 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 2.7E-34 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 PNUC_RS10085 c4d3874fb1651d3abb580803772c334c 84 PANTHER PTHR10168 4 84 4.9E-24 T 22-04-2016 PNUC_RS09655 f95ca357d2f2e28cff65508afb5632fd 279 Gene3D G3DSA:3.30.465.10 187 272 1.2E-24 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PNUC_RS09655 f95ca357d2f2e28cff65508afb5632fd 279 Gene3D G3DSA:3.10.580.10 50 186 4.7E-16 T 22-04-2016 PNUC_RS09655 f95ca357d2f2e28cff65508afb5632fd 279 Pfam PF03471 Transporter associated domain 199 269 1.1E-18 T 22-04-2016 IPR005170 Transporter-associated domain PNUC_RS09655 f95ca357d2f2e28cff65508afb5632fd 279 PANTHER PTHR22777 27 279 3.8E-91 T 22-04-2016 PNUC_RS09655 f95ca357d2f2e28cff65508afb5632fd 279 SUPERFAMILY SSF54631 59 193 7.45E-29 T 22-04-2016 PNUC_RS09655 f95ca357d2f2e28cff65508afb5632fd 279 SUPERFAMILY SSF56176 195 276 1.53E-20 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PNUC_RS09655 f95ca357d2f2e28cff65508afb5632fd 279 SMART SM00116 132 180 0.091 T 22-04-2016 IPR000644 CBS domain PNUC_RS09655 f95ca357d2f2e28cff65508afb5632fd 279 SMART SM00116 71 120 16.0 T 22-04-2016 IPR000644 CBS domain PNUC_RS09655 f95ca357d2f2e28cff65508afb5632fd 279 Pfam PF00571 CBS domain 131 180 2.2E-5 T 22-04-2016 IPR000644 CBS domain PNUC_RS09655 f95ca357d2f2e28cff65508afb5632fd 279 Pfam PF00571 CBS domain 80 118 0.0024 T 22-04-2016 IPR000644 CBS domain PNUC_RS09655 f95ca357d2f2e28cff65508afb5632fd 279 SMART SM01091 197 275 9.1E-25 T 22-04-2016 IPR005170 Transporter-associated domain PNUC_RS09030 f35e24f1493219a8e375d11b6b2778e5 519 Gene3D G3DSA:3.40.50.150 275 491 2.0E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS09030 f35e24f1493219a8e375d11b6b2778e5 519 PANTHER PTHR22807:SF30 186 513 2.4E-85 T 22-04-2016 PNUC_RS09030 f35e24f1493219a8e375d11b6b2778e5 519 SUPERFAMILY SSF53335 177 491 1.48E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS09030 f35e24f1493219a8e375d11b6b2778e5 519 Pfam PF01189 16S rRNA methyltransferase RsmB/F 282 488 3.4E-50 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS09030 f35e24f1493219a8e375d11b6b2778e5 519 Gene3D G3DSA:3.30.70.1170 215 273 5.3E-9 T 22-04-2016 PNUC_RS09030 f35e24f1493219a8e375d11b6b2778e5 519 PANTHER PTHR22807 186 513 2.4E-85 T 22-04-2016 PNUC_RS09030 f35e24f1493219a8e375d11b6b2778e5 519 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 363 375 2.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS09030 f35e24f1493219a8e375d11b6b2778e5 519 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 265 279 2.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS09030 f35e24f1493219a8e375d11b6b2778e5 519 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 413 429 2.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS09030 f35e24f1493219a8e375d11b6b2778e5 519 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 294 304 2.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS09030 f35e24f1493219a8e375d11b6b2778e5 519 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 473 490 2.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS07800 013494d5427ada51d31d3e40738432bf 128 Gene3D G3DSA:3.90.1010.10 2 126 2.1E-56 T 22-04-2016 PNUC_RS07800 013494d5427ada51d31d3e40738432bf 128 SUPERFAMILY SSF82649 1 125 1.99E-48 T 22-04-2016 PNUC_RS07800 013494d5427ada51d31d3e40738432bf 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 4.1E-69 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 PNUC_RS07800 013494d5427ada51d31d3e40738432bf 128 PANTHER PTHR10093:SF3 1 125 2.9E-97 T 22-04-2016 PNUC_RS07800 013494d5427ada51d31d3e40738432bf 128 Pfam PF01592 NifU-like N terminal domain 2 125 7.6E-56 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 PNUC_RS07800 013494d5427ada51d31d3e40738432bf 128 PANTHER PTHR10093 1 125 2.9E-97 T 22-04-2016 PNUC_RS09060 ba510e747555d7b718c386544e47a025 149 Gene3D G3DSA:2.70.40.10 3 148 7.1E-52 T 22-04-2016 IPR029054 dUTPase-like PNUC_RS09060 ba510e747555d7b718c386544e47a025 149 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 148 32.659 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 PNUC_RS09060 ba510e747555d7b718c386544e47a025 149 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 148 1.5E-47 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 PNUC_RS09060 ba510e747555d7b718c386544e47a025 149 Pfam PF00692 dUTPase 15 147 2.7E-38 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 PNUC_RS09060 ba510e747555d7b718c386544e47a025 149 PANTHER PTHR11241 4 148 2.6E-49 T 22-04-2016 PNUC_RS09060 ba510e747555d7b718c386544e47a025 149 SUPERFAMILY SSF51283 16 148 5.63E-50 T 22-04-2016 IPR029054 dUTPase-like PNUC_RS06915 a29cbeb69c86fa105124929dd59a5723 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 258 4.4E-38 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PNUC_RS06915 a29cbeb69c86fa105124929dd59a5723 259 SUPERFAMILY SSF52096 6 258 2.09E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS06915 a29cbeb69c86fa105124929dd59a5723 259 PANTHER PTHR11941:SF71 18 256 9.2E-67 T 22-04-2016 PNUC_RS06915 a29cbeb69c86fa105124929dd59a5723 259 Gene3D G3DSA:3.90.226.10 8 203 3.5E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS06915 a29cbeb69c86fa105124929dd59a5723 259 Gene3D G3DSA:1.10.12.10 206 259 1.3E-11 T 22-04-2016 IPR014748 Crontonase, C-terminal PNUC_RS06915 a29cbeb69c86fa105124929dd59a5723 259 PANTHER PTHR11941 18 256 9.2E-67 T 22-04-2016 PNUC_RS01910 507829f65d0db3d8e65bbbfc59cd61ed 321 Gene3D G3DSA:1.10.530.10 155 277 7.7E-22 T 22-04-2016 PNUC_RS01910 507829f65d0db3d8e65bbbfc59cd61ed 321 SUPERFAMILY SSF53955 177 296 8.13E-22 T 22-04-2016 IPR023346 Lysozyme-like domain PNUC_RS01910 507829f65d0db3d8e65bbbfc59cd61ed 321 Pfam PF01464 Transglycosylase SLT domain 192 272 2.9E-16 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 PNUC_RS01910 507829f65d0db3d8e65bbbfc59cd61ed 321 PANTHER PTHR21666 169 281 3.9E-18 T 22-04-2016 PNUC_RS10320 a03d709a9117b5de5f5c9d2e529d1e78 131 Gene3D G3DSA:3.30.1130.10 15 127 2.0E-28 T 22-04-2016 PNUC_RS10320 a03d709a9117b5de5f5c9d2e529d1e78 131 SMART SM00905 16 127 1.7E-27 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PNUC_RS10320 a03d709a9117b5de5f5c9d2e529d1e78 131 SUPERFAMILY SSF55620 12 127 1.39E-26 T 22-04-2016 PNUC_RS10320 a03d709a9117b5de5f5c9d2e529d1e78 131 Pfam PF02152 Dihydroneopterin aldolase 16 125 5.9E-22 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 Gene3D G3DSA:3.40.50.720 2 128 7.6E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 297 1.1E-125 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 Pfam PF02629 CoA binding domain 6 102 1.4E-21 T 22-04-2016 IPR003781 CoA-binding GO:0048037 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 161 190 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 PANTHER PTHR11117:SF2 1 297 1.6E-155 T 22-04-2016 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 Pfam PF00549 CoA-ligase 160 271 8.7E-16 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 Gene3D G3DSA:3.40.50.261 129 296 9.2E-71 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 SUPERFAMILY SSF52210 132 296 1.07E-52 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 SUPERFAMILY SSF51735 1 114 6.24E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 PRINTS PR01798 Succinyl-CoA synthase signature 186 204 1.1E-32 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 PRINTS PR01798 Succinyl-CoA synthase signature 217 230 1.1E-32 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 1.1E-32 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 PRINTS PR01798 Succinyl-CoA synthase signature 249 266 1.1E-32 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 PANTHER PTHR11117 1 297 1.6E-155 T 22-04-2016 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 SMART SM00881 4 103 8.6E-27 T 22-04-2016 IPR003781 CoA-binding GO:0048037 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 PIRSF PIRSF001553 1 297 1.9E-115 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PNUC_RS09495 818401476b9ffe98ec45239dee00338f 297 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 245 258 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site PNUC_RS07280 070a28602391b33250f695a662310e1c 492 PANTHER PTHR21248 26 492 1.4E-130 T 22-04-2016 PNUC_RS07280 070a28602391b33250f695a662310e1c 492 SUPERFAMILY SSF56024 302 478 2.92E-41 T 22-04-2016 PNUC_RS07280 070a28602391b33250f695a662310e1c 492 Pfam PF13091 PLD-like domain 335 458 4.9E-26 T 22-04-2016 IPR025202 Phospholipase D-like domain PNUC_RS07280 070a28602391b33250f695a662310e1c 492 Pfam PF13091 PLD-like domain 143 288 1.4E-14 T 22-04-2016 IPR025202 Phospholipase D-like domain PNUC_RS07280 070a28602391b33250f695a662310e1c 492 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 17 492 4.5E-124 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 PNUC_RS07280 070a28602391b33250f695a662310e1c 492 PANTHER PTHR21248:SF9 26 492 1.4E-130 T 22-04-2016 PNUC_RS07280 070a28602391b33250f695a662310e1c 492 Gene3D G3DSA:3.30.870.10 120 324 5.5E-38 T 22-04-2016 PNUC_RS07280 070a28602391b33250f695a662310e1c 492 Gene3D G3DSA:3.30.870.10 325 464 4.1E-36 T 22-04-2016 PNUC_RS07280 070a28602391b33250f695a662310e1c 492 Hamap MF_00190 Cardiolipin synthase A [clsA]. 10 492 46.405 T 22-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 PNUC_RS07280 070a28602391b33250f695a662310e1c 492 SMART SM00155 227 254 0.0016 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PNUC_RS07280 070a28602391b33250f695a662310e1c 492 SMART SM00155 405 432 4.5E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PNUC_RS07280 070a28602391b33250f695a662310e1c 492 SUPERFAMILY SSF56024 77 321 4.49E-49 T 22-04-2016 PNUC_RS07235 a8d6b5c027ca4ee2dda6479def0b4ec8 759 Pfam PF13432 Tetratricopeptide repeat 58 100 0.0022 T 22-04-2016 PNUC_RS07235 a8d6b5c027ca4ee2dda6479def0b4ec8 759 Gene3D G3DSA:1.25.40.10 43 230 6.2E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS07235 a8d6b5c027ca4ee2dda6479def0b4ec8 759 Pfam PF00263 Bacterial type II and III secretion system protein 505 665 1.8E-30 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 PNUC_RS07235 a8d6b5c027ca4ee2dda6479def0b4ec8 759 PRINTS PR00811 Bacterial general secretion pathway protein D signature 500 524 1.6E-7 T 22-04-2016 IPR001775 GspD/PilQ family PNUC_RS07235 a8d6b5c027ca4ee2dda6479def0b4ec8 759 PRINTS PR00811 Bacterial general secretion pathway protein D signature 630 648 1.6E-7 T 22-04-2016 IPR001775 GspD/PilQ family PNUC_RS07235 a8d6b5c027ca4ee2dda6479def0b4ec8 759 PRINTS PR00811 Bacterial general secretion pathway protein D signature 653 667 1.6E-7 T 22-04-2016 IPR001775 GspD/PilQ family PNUC_RS07235 a8d6b5c027ca4ee2dda6479def0b4ec8 759 SUPERFAMILY SSF48452 54 229 7.17E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS07235 a8d6b5c027ca4ee2dda6479def0b4ec8 759 PANTHER PTHR30332 421 737 3.3E-23 T 22-04-2016 PNUC_RS05255 57c64e19a22f288839234d7a5ad2e05c 155 Gene3D G3DSA:3.10.450.50 11 153 7.3E-75 T 22-04-2016 IPR032710 NTF2-like domain PNUC_RS05255 57c64e19a22f288839234d7a5ad2e05c 155 PANTHER PTHR31757:SF0 1 155 5.5E-86 T 22-04-2016 PNUC_RS05255 57c64e19a22f288839234d7a5ad2e05c 155 PANTHER PTHR31757 1 155 5.5E-86 T 22-04-2016 PNUC_RS05255 57c64e19a22f288839234d7a5ad2e05c 155 SUPERFAMILY SSF54427 1 155 3.83E-79 T 22-04-2016 IPR032710 NTF2-like domain PNUC_RS05255 57c64e19a22f288839234d7a5ad2e05c 155 Pfam PF07080 Protein of unknown function (DUF1348) 5 145 7.9E-72 T 22-04-2016 IPR009783 Protein of unknown function DUF1348 PNUC_RS08305 459810750b97fcb86a968d41dd59df4f 167 Gene3D G3DSA:3.40.50.270 4 141 4.1E-33 T 22-04-2016 PNUC_RS08305 459810750b97fcb86a968d41dd59df4f 167 PANTHER PTHR11717:SF18 1 160 2.9E-25 T 22-04-2016 PNUC_RS08305 459810750b97fcb86a968d41dd59df4f 167 SUPERFAMILY SSF52788 5 143 3.01E-33 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PNUC_RS08305 459810750b97fcb86a968d41dd59df4f 167 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 134 9.0E-12 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PNUC_RS08305 459810750b97fcb86a968d41dd59df4f 167 SMART SM00226 5 143 8.8E-17 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PNUC_RS08305 459810750b97fcb86a968d41dd59df4f 167 PANTHER PTHR11717 1 160 2.9E-25 T 22-04-2016 PNUC_RS06515 391b96704668c83a24f3918ff459a3c4 294 Gene3D G3DSA:3.10.129.10 147 252 5.7E-10 T 22-04-2016 IPR029069 HotDog domain PNUC_RS06515 391b96704668c83a24f3918ff459a3c4 294 SUPERFAMILY SSF54637 175 292 2.86E-14 T 22-04-2016 IPR029069 HotDog domain PNUC_RS06515 391b96704668c83a24f3918ff459a3c4 294 PANTHER PTHR28152 1 293 1.5E-71 T 22-04-2016 PNUC_RS06515 391b96704668c83a24f3918ff459a3c4 294 SUPERFAMILY SSF54637 82 157 1.24E-5 T 22-04-2016 IPR029069 HotDog domain PNUC_RS06515 391b96704668c83a24f3918ff459a3c4 294 Pfam PF01575 MaoC like domain 176 249 2.8E-4 T 22-04-2016 IPR002539 MaoC-like domain PNUC_RS06515 391b96704668c83a24f3918ff459a3c4 294 Pfam PF13452 N-terminal half of MaoC dehydratase 82 147 6.8E-10 T 22-04-2016 PNUC_RS06515 391b96704668c83a24f3918ff459a3c4 294 PANTHER PTHR28152:SF1 1 293 1.5E-71 T 22-04-2016 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 PIRSF PIRSF037532 3 770 1.1E-194 T 22-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 SUPERFAMILY SSF55785 388 460 1.42E-5 T 22-04-2016 IPR000014 PAS domain PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 Gene3D G3DSA:3.30.450.20 392 444 4.8E-6 T 22-04-2016 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 PANTHER PTHR24423 381 461 7.0E-55 T 22-04-2016 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 PANTHER PTHR24423 494 747 7.0E-55 T 22-04-2016 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 PANTHER PTHR24423 27 34 7.0E-55 T 22-04-2016 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 SUPERFAMILY SSF158472 338 387 3.4E-9 T 22-04-2016 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 Gene3D G3DSA:3.30.565.10 593 747 4.3E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 SUPERFAMILY SSF47384 532 607 8.83E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 SUPERFAMILY SSF55874 596 750 1.44E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 643 750 3.5E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 Gene3D G3DSA:1.10.287.130 535 592 8.8E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 Pfam PF00672 HAMP domain 320 386 5.8E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 693 707 1.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 711 721 1.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 722 740 1.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 Pfam PF00512 His Kinase A (phospho-acceptor) domain 537 603 6.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 SMART SM00387 643 766 7.3E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 SMART SM00304 338 390 7.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PNUC_RS10750 a27d628e146e8a2585d7d37379e46287 770 SMART SM00388 535 607 5.6E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS05555 e44973129995516cfb03e63f762690f4 189 Pfam PF04542 Sigma-70 region 2 16 75 2.3E-4 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS05555 e44973129995516cfb03e63f762690f4 189 SUPERFAMILY SSF88946 11 83 2.35E-8 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS05555 e44973129995516cfb03e63f762690f4 189 Gene3D G3DSA:1.10.10.10 119 183 2.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS05555 e44973129995516cfb03e63f762690f4 189 SUPERFAMILY SSF88659 119 182 2.62E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS05555 e44973129995516cfb03e63f762690f4 189 Pfam PF08281 Sigma-70, region 4 125 176 9.1E-16 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS05555 e44973129995516cfb03e63f762690f4 189 PANTHER PTHR30173 4 183 2.2E-19 T 22-04-2016 PNUC_RS05555 e44973129995516cfb03e63f762690f4 189 Gene3D G3DSA:1.10.1740.10 4 77 3.9E-8 T 22-04-2016 PNUC_RS05555 e44973129995516cfb03e63f762690f4 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 182 2.4E-22 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS06510 73b8c4422946c8639abcaf55b52ddaae 300 PANTHER PTHR10948 1 300 1.2E-74 T 22-04-2016 PNUC_RS06510 73b8c4422946c8639abcaf55b52ddaae 300 Pfam PF00665 Integrase core domain 146 250 5.8E-9 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PNUC_RS06510 73b8c4422946c8639abcaf55b52ddaae 300 Gene3D G3DSA:3.30.420.10 146 291 8.1E-13 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS06510 73b8c4422946c8639abcaf55b52ddaae 300 Gene3D G3DSA:1.10.10.60 56 95 9.8E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS06510 73b8c4422946c8639abcaf55b52ddaae 300 ProSitePatterns PS01043 Transposases, IS30 family, signature. 237 253 - T 22-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 PNUC_RS06510 73b8c4422946c8639abcaf55b52ddaae 300 Pfam PF13936 Helix-turn-helix domain 2 28 7.4E-9 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain PNUC_RS06510 73b8c4422946c8639abcaf55b52ddaae 300 SUPERFAMILY SSF53098 146 293 1.07E-25 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 SMART SM01018 331 418 3.0E-41 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 PIRSF PIRSF000381 2 888 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 Gene3D G3DSA:3.40.50.280 429 584 3.9E-64 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 SUPERFAMILY SSF47644 326 417 2.62E-26 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 Gene3D G3DSA:3.10.196.10 646 915 2.6E-100 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 Gene3D G3DSA:1.10.1240.10 326 415 9.3E-36 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 SUPERFAMILY SSF52242 427 583 9.16E-44 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 SUPERFAMILY SSF51717 28 298 4.84E-91 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 Pfam PF02607 B12 binding domain 333 410 3.3E-24 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 Pfam PF00809 Pterin binding enzyme 32 270 3.0E-59 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 SUPERFAMILY SSF56507 591 915 1.44E-124 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 627 901 9.3E-120 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 Gene3D G3DSA:3.20.20.20 28 300 2.1E-114 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 Pfam PF02310 B12 binding domain 433 527 1.2E-18 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PNUC_RS10250 3530092579a5103c71c9258ca1f5b863 916 TIGRFAM TIGR02082 metH: methionine synthase 7 885 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PNUC_RS00355 eaa5476374ca16cafde469e9c477c76e 64 Pfam PF00831 Ribosomal L29 protein 5 60 7.6E-16 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00355 eaa5476374ca16cafde469e9c477c76e 64 SUPERFAMILY SSF46561 1 61 2.22E-16 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00355 eaa5476374ca16cafde469e9c477c76e 64 Gene3D G3DSA:1.10.287.310 1 61 1.1E-18 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00355 eaa5476374ca16cafde469e9c477c76e 64 PANTHER PTHR10916 1 64 7.3E-13 T 22-04-2016 PNUC_RS00355 eaa5476374ca16cafde469e9c477c76e 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.518 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00355 eaa5476374ca16cafde469e9c477c76e 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.6E-14 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS10565 3008a362ed7fa83102d9dba61d549994 320 SUPERFAMILY SSF53850 113 280 6.08E-16 T 22-04-2016 PNUC_RS10565 3008a362ed7fa83102d9dba61d549994 320 PIRSF PIRSF017082 2 320 3.6E-75 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS10565 3008a362ed7fa83102d9dba61d549994 320 PANTHER PTHR30349 26 288 2.2E-70 T 22-04-2016 PNUC_RS10565 3008a362ed7fa83102d9dba61d549994 320 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 316 5.0E-76 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS10565 3008a362ed7fa83102d9dba61d549994 320 Gene3D G3DSA:3.40.190.10 124 205 5.7E-5 T 22-04-2016 PNUC_RS10565 3008a362ed7fa83102d9dba61d549994 320 PANTHER PTHR30349:SF37 26 288 2.2E-70 T 22-04-2016 PNUC_RS02720 590f1d11d5415e9bdee8bbc28aa2a400 319 Pfam PF03186 CobD/Cbib protein 14 259 4.3E-21 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 PNUC_RS02720 590f1d11d5415e9bdee8bbc28aa2a400 319 PANTHER PTHR38684 2 267 4.3E-26 T 22-04-2016 PNUC_RS02720 590f1d11d5415e9bdee8bbc28aa2a400 319 PANTHER PTHR38684 290 319 4.3E-26 T 22-04-2016 PNUC_RS02720 590f1d11d5415e9bdee8bbc28aa2a400 319 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 319 55.626 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 PNUC_RS01275 4773447e7941ede09f62c99b300772d9 279 PANTHER PTHR24032:SF27 5 257 2.3E-101 T 22-04-2016 PNUC_RS01275 4773447e7941ede09f62c99b300772d9 279 Gene3D G3DSA:3.60.21.10 3 130 4.4E-53 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS01275 4773447e7941ede09f62c99b300772d9 279 Gene3D G3DSA:3.60.21.10 167 259 4.4E-53 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS01275 4773447e7941ede09f62c99b300772d9 279 PANTHER PTHR24032 5 257 2.3E-101 T 22-04-2016 PNUC_RS01275 4773447e7941ede09f62c99b300772d9 279 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 4 256 1.1E-82 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PNUC_RS01275 4773447e7941ede09f62c99b300772d9 279 PIRSF PIRSF000903 2 270 8.8E-102 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PNUC_RS01275 4773447e7941ede09f62c99b300772d9 279 Pfam PF00149 Calcineurin-like phosphoesterase 3 147 1.2E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PNUC_RS01275 4773447e7941ede09f62c99b300772d9 279 SUPERFAMILY SSF56300 3 278 8.98E-57 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS00720 ad38fa6de2bf5e8bf425f518435d9e96 194 Pfam PF09361 Phasin protein 9 106 8.1E-16 T 22-04-2016 IPR018968 Phasin PNUC_RS03045 23b47428b6b7f8cbe752857b35916f44 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 180 3.4E-26 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS03045 23b47428b6b7f8cbe752857b35916f44 190 Pfam PF04542 Sigma-70 region 2 38 94 1.5E-15 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS03045 23b47428b6b7f8cbe752857b35916f44 190 Gene3D G3DSA:1.10.10.10 126 182 9.1E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03045 23b47428b6b7f8cbe752857b35916f44 190 Pfam PF08281 Sigma-70, region 4 126 177 1.9E-10 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS03045 23b47428b6b7f8cbe752857b35916f44 190 SUPERFAMILY SSF88946 12 107 3.14E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS03045 23b47428b6b7f8cbe752857b35916f44 190 ProSitePatterns PS00622 LuxR-type HTH domain signature. 149 176 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS03045 23b47428b6b7f8cbe752857b35916f44 190 Gene3D G3DSA:1.10.1740.10 12 97 1.6E-23 T 22-04-2016 PNUC_RS03045 23b47428b6b7f8cbe752857b35916f44 190 SUPERFAMILY SSF88659 112 182 5.42E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS03045 23b47428b6b7f8cbe752857b35916f44 190 PANTHER PTHR30173 2 187 1.3E-34 T 22-04-2016 PNUC_RS08145 411553adedf104961af503c0a3277ec4 556 SUPERFAMILY SSF103473 10 327 4.58E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS08145 411553adedf104961af503c0a3277ec4 556 Pfam PF07690 Major Facilitator Superfamily 23 332 5.0E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS08145 411553adedf104961af503c0a3277ec4 556 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PNUC_RS08145 411553adedf104961af503c0a3277ec4 556 PANTHER PTHR23508:SF7 455 552 1.2E-220 T 22-04-2016 PNUC_RS08145 411553adedf104961af503c0a3277ec4 556 PANTHER PTHR23508:SF7 10 340 1.2E-220 T 22-04-2016 PNUC_RS08145 411553adedf104961af503c0a3277ec4 556 SUPERFAMILY SSF103473 454 551 8.24E-11 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS08145 411553adedf104961af503c0a3277ec4 556 Pfam PF00083 Sugar (and other) transporter 446 552 1.1E-6 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PNUC_RS08145 411553adedf104961af503c0a3277ec4 556 PANTHER PTHR23508 455 552 1.2E-220 T 22-04-2016 PNUC_RS08145 411553adedf104961af503c0a3277ec4 556 PANTHER PTHR23508 10 340 1.2E-220 T 22-04-2016 PNUC_RS08145 411553adedf104961af503c0a3277ec4 556 Gene3D G3DSA:1.20.1250.20 245 330 3.7E-25 T 22-04-2016 PNUC_RS08145 411553adedf104961af503c0a3277ec4 556 Gene3D G3DSA:1.20.1250.20 453 548 3.7E-25 T 22-04-2016 PNUC_RS08145 411553adedf104961af503c0a3277ec4 556 Gene3D G3DSA:1.20.1250.20 15 222 1.2E-23 T 22-04-2016 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 SUPERFAMILY SSF118215 6 404 2.09E-114 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 PANTHER PTHR11958 1 409 1.3E-169 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 PANTHER PTHR11958:SF26 1 409 1.3E-169 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 3.4E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 3.4E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 3.4E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 3.4E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 3.4E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 PRINTS PR00173 Glutamate-aspartate symporter signature 357 377 3.4E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 3.4E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 3.4E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 Pfam PF00375 Sodium:dicarboxylate symporter family 7 403 3.4E-111 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS09070 9b70836bb548098943ccfca5847c7c35 412 Gene3D G3DSA:1.10.3860.10 2 407 1.4E-117 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 PIRSF PIRSF500210 2 322 1.4E-114 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 Gene3D G3DSA:3.30.540.10 10 181 8.9E-62 T 22-04-2016 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 57 83 2.9E-54 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 295 320 2.9E-54 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 20 47 2.9E-54 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 136 159 2.9E-54 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 167 190 2.9E-54 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 193 220 2.9E-54 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 SUPERFAMILY SSF56655 11 319 2.14E-103 T 22-04-2016 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 Gene3D G3DSA:3.40.190.80 185 320 3.3E-54 T 22-04-2016 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 13 181 5.4E-53 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 PIRSF PIRSF000904 2 322 2.9E-111 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 PANTHER PTHR11556 18 319 2.7E-127 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 PNUC_RS03485 6a35ecad1c9e599929f5e85952e46aa9 323 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 1 321 42.858 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 PNUC_RS03800 fb4cc3ccac4a35a505b9e94034d0f1cb 152 PIRSF PIRSF029598 10 149 5.5E-35 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 PNUC_RS03800 fb4cc3ccac4a35a505b9e94034d0f1cb 152 PANTHER PTHR37819 15 146 6.4E-29 T 22-04-2016 PNUC_RS03800 fb4cc3ccac4a35a505b9e94034d0f1cb 152 Pfam PF06146 Phosphate-starvation-inducible E 64 132 4.7E-17 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like PNUC_RS03800 fb4cc3ccac4a35a505b9e94034d0f1cb 152 PANTHER PTHR37819:SF1 15 146 6.4E-29 T 22-04-2016 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 PANTHER PTHR11735:SF6 1 355 1.4E-143 T 22-04-2016 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 SUPERFAMILY SSF53067 111 326 3.6E-42 T 22-04-2016 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 SUPERFAMILY SSF53067 48 130 5.24E-29 T 22-04-2016 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 SUPERFAMILY SSF53067 3 21 5.24E-29 T 22-04-2016 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 85 105 2.3E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 163 184 2.3E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 2.3E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 140 152 2.3E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 280 289 2.3E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 106 125 2.3E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 PANTHER PTHR11735 1 355 1.4E-143 T 22-04-2016 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 323 6.8E-110 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 351 60.896 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 330 2.6E-126 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 Pfam PF00814 Glycoprotease family 33 324 8.7E-99 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 ProSitePatterns PS01016 Glycoprotease family signature. 105 125 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PNUC_RS08855 3ad0cbb5982791804e6a21ed9ce379f1 357 Gene3D G3DSA:3.30.420.40 1 168 3.0E-46 T 22-04-2016 PNUC_RS04925 3ba1d4efaf3f66849d7d9ab2686100d4 553 Gene3D G3DSA:3.40.50.880 291 542 2.0E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS04925 3ba1d4efaf3f66849d7d9ab2686100d4 553 TIGRFAM TIGR00337 PyrG: CTP synthase 1 540 1.7E-240 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PNUC_RS04925 3ba1d4efaf3f66849d7d9ab2686100d4 553 SUPERFAMILY SSF52540 2 270 4.78E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04925 3ba1d4efaf3f66849d7d9ab2686100d4 553 Pfam PF00117 Glutamine amidotransferase class-I 305 540 3.2E-58 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PNUC_RS04925 3ba1d4efaf3f66849d7d9ab2686100d4 553 Gene3D G3DSA:3.40.50.300 1 286 6.7E-131 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04925 3ba1d4efaf3f66849d7d9ab2686100d4 553 PANTHER PTHR11550 1 551 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PNUC_RS04925 3ba1d4efaf3f66849d7d9ab2686100d4 553 Hamap MF_01227 CTP synthase [pyrG]. 2 545 50.863 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PNUC_RS04925 3ba1d4efaf3f66849d7d9ab2686100d4 553 SUPERFAMILY SSF52317 292 542 2.69E-86 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS04925 3ba1d4efaf3f66849d7d9ab2686100d4 553 Pfam PF06418 CTP synthase N-terminus 3 270 6.0E-124 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PNUC_RS07555 390e6a41b171f40022e02f2a06239223 377 PANTHER PTHR22939 255 376 5.3E-35 T 22-04-2016 PNUC_RS07555 390e6a41b171f40022e02f2a06239223 377 PANTHER PTHR22939:SF78 255 376 5.3E-35 T 22-04-2016 PNUC_RS07555 390e6a41b171f40022e02f2a06239223 377 Gene3D G3DSA:2.30.42.10 96 154 1.2E-5 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS07555 390e6a41b171f40022e02f2a06239223 377 Pfam PF02163 Peptidase family M50 9 361 1.3E-70 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 PNUC_RS08140 d6203943890f6a250b8db7b882c20e6e 288 SUPERFAMILY SSF53850 88 287 1.65E-31 T 22-04-2016 PNUC_RS08140 d6203943890f6a250b8db7b882c20e6e 288 Pfam PF03466 LysR substrate binding domain 88 286 1.5E-26 T 22-04-2016 IPR005119 LysR, substrate-binding PNUC_RS08140 d6203943890f6a250b8db7b882c20e6e 288 Gene3D G3DSA:1.10.10.10 1 82 5.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08140 d6203943890f6a250b8db7b882c20e6e 288 Gene3D G3DSA:3.40.190.10 91 180 7.5E-13 T 22-04-2016 PNUC_RS08140 d6203943890f6a250b8db7b882c20e6e 288 SUPERFAMILY SSF46785 1 110 4.3E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08140 d6203943890f6a250b8db7b882c20e6e 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.3E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS08140 d6203943890f6a250b8db7b882c20e6e 288 Gene3D G3DSA:3.40.190.10 181 243 1.3E-6 T 22-04-2016 PNUC_RS08140 d6203943890f6a250b8db7b882c20e6e 288 PANTHER PTHR30579:SF3 1 284 2.0E-64 T 22-04-2016 PNUC_RS08140 d6203943890f6a250b8db7b882c20e6e 288 PANTHER PTHR30579 1 284 2.0E-64 T 22-04-2016 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 Gene3D G3DSA:1.10.3850.10 279 498 1.0E-50 T 22-04-2016 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 Gene3D G3DSA:1.10.3850.10 802 1015 3.0E-52 T 22-04-2016 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1014 7.6E-289 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 PRINTS PR00702 Acriflavin resistance protein family signature 612 626 3.6E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 3.6E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 3.6E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.6E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 3.6E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.6E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 3.6E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.6E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 PANTHER PTHR32063:SF24 2 1029 0.0 T 22-04-2016 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 SUPERFAMILY SSF82866 794 1021 2.35E-52 T 22-04-2016 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 SUPERFAMILY SSF82714 185 265 8.24E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 SUPERFAMILY SSF82693 139 182 4.71E-17 T 22-04-2016 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 SUPERFAMILY SSF82693 268 324 4.71E-17 T 22-04-2016 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 SUPERFAMILY SSF82693 42 127 7.85E-21 T 22-04-2016 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 SUPERFAMILY SSF82866 292 495 1.02E-35 T 22-04-2016 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 Gene3D G3DSA:3.30.70.1430 42 142 2.1E-25 T 22-04-2016 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 PANTHER PTHR32063 2 1029 0.0 T 22-04-2016 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 SUPERFAMILY SSF82714 714 795 3.01E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 Pfam PF00873 AcrB/AcrD/AcrF family 11 1013 8.2E-279 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 SUPERFAMILY SSF82693 555 653 4.97E-8 T 22-04-2016 PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 Gene3D G3DSA:3.30.2090.10 714 795 8.2E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS08740 f6fd950d81464fccaad7aa02ceca25c8 1042 Gene3D G3DSA:3.30.2090.10 185 266 1.8E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 PRINTS PR00986 Valyl-tRNA synthetase signature 507 525 3.9E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 PRINTS PR00986 Valyl-tRNA synthetase signature 363 376 3.9E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 PRINTS PR00986 Valyl-tRNA synthetase signature 53 64 3.9E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 PRINTS PR00986 Valyl-tRNA synthetase signature 476 497 3.9E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 PRINTS PR00986 Valyl-tRNA synthetase signature 247 264 3.9E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 SUPERFAMILY SSF47323 643 912 2.43E-59 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 898 963 1.1E-16 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 PANTHER PTHR11946 609 872 0.0 T 22-04-2016 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 PANTHER PTHR11946 894 957 0.0 T 22-04-2016 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 PANTHER PTHR11946 10 571 0.0 T 22-04-2016 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 SUPERFAMILY SSF52374 610 642 5.43E-134 T 22-04-2016 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 SUPERFAMILY SSF52374 19 209 5.43E-134 T 22-04-2016 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 SUPERFAMILY SSF52374 358 572 5.43E-134 T 22-04-2016 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 Pfam PF08264 Anticodon-binding domain of tRNA 685 838 1.5E-39 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 Hamap MF_02004 Valine--tRNA ligase [valS]. 19 963 15.605 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 Gene3D G3DSA:1.10.287.380 896 961 2.3E-5 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 Gene3D G3DSA:3.40.50.620 358 572 2.2E-136 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 Gene3D G3DSA:3.40.50.620 21 210 2.2E-136 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 Gene3D G3DSA:3.40.50.620 610 631 2.2E-136 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 Gene3D G3DSA:3.90.740.10 211 354 1.4E-50 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 PANTHER PTHR11946:SF5 609 872 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 PANTHER PTHR11946:SF5 894 957 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 PANTHER PTHR11946:SF5 10 571 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 TIGRFAM TIGR00422 valS: valine--tRNA ligase 20 945 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 71 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 Gene3D G3DSA:1.10.730.10 632 831 3.8E-61 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 SUPERFAMILY SSF50677 208 359 2.09E-63 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 SUPERFAMILY SSF46589 898 962 8.89E-15 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 PNUC_RS08925 a1a8d43f37346a1fd323987ee6535886 963 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 36 632 4.8E-204 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS10410 bb66e95ffa7aa877fcc888dfcb1c3ab2 216 PANTHER PTHR30055:SF58 15 213 4.6E-58 T 22-04-2016 PNUC_RS10410 bb66e95ffa7aa877fcc888dfcb1c3ab2 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 47 77 7.5E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PNUC_RS10410 bb66e95ffa7aa877fcc888dfcb1c3ab2 216 PANTHER PTHR30055 15 213 4.6E-58 T 22-04-2016 PNUC_RS10410 bb66e95ffa7aa877fcc888dfcb1c3ab2 216 SUPERFAMILY SSF48498 99 197 4.45E-6 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PNUC_RS10410 bb66e95ffa7aa877fcc888dfcb1c3ab2 216 SUPERFAMILY SSF46689 21 94 7.7E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS10410 bb66e95ffa7aa877fcc888dfcb1c3ab2 216 Gene3D G3DSA:1.10.357.10 21 214 2.7E-38 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PNUC_RS03570 acf4a6d29bd5a010f1864b0efb3eae0c 539 SUPERFAMILY SSF56317 4 245 2.22E-58 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS03570 acf4a6d29bd5a010f1864b0efb3eae0c 539 Gene3D G3DSA:3.60.110.10 5 245 1.7E-55 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS03570 acf4a6d29bd5a010f1864b0efb3eae0c 539 Pfam PF02540 NAD synthase 266 514 3.1E-74 T 22-04-2016 IPR022310 NAD/GMP synthase PNUC_RS03570 acf4a6d29bd5a010f1864b0efb3eae0c 539 TIGRFAM TIGR00552 nadE: NAD+ synthetase 273 517 1.6E-61 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 PNUC_RS03570 acf4a6d29bd5a010f1864b0efb3eae0c 539 PANTHER PTHR23090 5 535 1.5E-159 T 22-04-2016 PNUC_RS03570 acf4a6d29bd5a010f1864b0efb3eae0c 539 Gene3D G3DSA:3.40.50.620 258 521 3.1E-75 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS03570 acf4a6d29bd5a010f1864b0efb3eae0c 539 Pfam PF00795 Carbon-nitrogen hydrolase 5 246 3.4E-26 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS03570 acf4a6d29bd5a010f1864b0efb3eae0c 539 SUPERFAMILY SSF52402 262 522 1.68E-76 T 22-04-2016 PNUC_RS01040 57d96b68ae20d86b3451c406c4cd3d27 103 PANTHER PTHR21349 1 102 1.1E-41 T 22-04-2016 PNUC_RS01040 57d96b68ae20d86b3451c406c4cd3d27 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS01040 57d96b68ae20d86b3451c406c4cd3d27 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.688 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS01040 57d96b68ae20d86b3451c406c4cd3d27 103 SUPERFAMILY SSF141091 1 101 1.19E-37 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 PNUC_RS01040 57d96b68ae20d86b3451c406c4cd3d27 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 6.9E-40 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 PNUC_RS01040 57d96b68ae20d86b3451c406c4cd3d27 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.6E-35 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS01990 5e74db021d16e256eff28ccc9120b16c 279 Gene3D G3DSA:3.10.50.40 149 263 1.2E-27 T 22-04-2016 PNUC_RS01990 5e74db021d16e256eff28ccc9120b16c 279 SUPERFAMILY SSF109998 39 178 1.84E-13 T 22-04-2016 IPR027304 Trigger factor/SurA domain PNUC_RS01990 5e74db021d16e256eff28ccc9120b16c 279 PANTHER PTHR10657:SF11 1 273 8.9E-21 T 22-04-2016 PNUC_RS01990 5e74db021d16e256eff28ccc9120b16c 279 PANTHER PTHR10657 1 273 8.9E-21 T 22-04-2016 PNUC_RS01990 5e74db021d16e256eff28ccc9120b16c 279 SUPERFAMILY SSF54534 149 241 1.64E-20 T 22-04-2016 PNUC_RS01990 5e74db021d16e256eff28ccc9120b16c 279 Pfam PF13145 PPIC-type PPIASE domain 126 252 2.8E-16 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PNUC_RS05885 7316480d1059b454ffcc4bddceb7081e 499 PANTHER PTHR13504 175 485 3.5E-41 T 22-04-2016 PNUC_RS05885 7316480d1059b454ffcc4bddceb7081e 499 Gene3D G3DSA:1.10.3290.10 262 462 2.5E-34 T 22-04-2016 IPR003812 Fido domain PNUC_RS05885 7316480d1059b454ffcc4bddceb7081e 499 Pfam PF02661 Fic/DOC family 329 417 4.6E-13 T 22-04-2016 IPR003812 Fido domain PNUC_RS05885 7316480d1059b454ffcc4bddceb7081e 499 PANTHER PTHR13504:SF32 175 485 3.5E-41 T 22-04-2016 PNUC_RS05885 7316480d1059b454ffcc4bddceb7081e 499 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 22 76 7.4E-6 T 22-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin PNUC_RS05885 7316480d1059b454ffcc4bddceb7081e 499 SUPERFAMILY SSF140931 299 478 2.88E-29 T 22-04-2016 IPR003812 Fido domain PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 Gene3D G3DSA:2.40.30.10 102 203 2.3E-29 T 22-04-2016 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 Gene3D G3DSA:3.40.50.80 205 339 1.5E-39 T 22-04-2016 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 SUPERFAMILY SSF52343 205 338 3.14E-38 T 22-04-2016 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 Gene3D G3DSA:3.10.20.30 2 92 5.2E-30 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 81 2.6E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 SUPERFAMILY SSF63380 102 203 6.47E-22 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 Pfam PF00970 Oxidoreductase FAD-binding domain 105 201 1.1E-15 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 PANTHER PTHR19370:SF68 33 337 7.3E-69 T 22-04-2016 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 PANTHER PTHR19370 33 337 7.3E-69 T 22-04-2016 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 SUPERFAMILY SSF54292 2 89 1.57E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 Pfam PF00175 Oxidoreductase NAD-binding domain 213 318 6.6E-22 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 212 231 2.3E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 2.3E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 304 312 2.3E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 205 3.0E-23 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 PRINTS PR00410 Phenol hydroxylase reductase family signature 212 231 3.0E-23 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 PRINTS PR00410 Phenol hydroxylase reductase family signature 304 312 3.0E-23 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 3.0E-23 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 3.0E-23 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PNUC_RS08965 08b8a4891e81142b539809e3f66f6e49 346 PRINTS PR00410 Phenol hydroxylase reductase family signature 237 246 3.0E-23 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PNUC_RS00890 ae7ca4a0d26888f4236a2ba69b9cbe24 389 PANTHER PTHR22926 2 152 2.0E-156 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS00890 ae7ca4a0d26888f4236a2ba69b9cbe24 389 PANTHER PTHR22926 175 389 2.0E-156 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS00890 ae7ca4a0d26888f4236a2ba69b9cbe24 389 PANTHER PTHR22926:SF5 2 152 2.0E-156 T 22-04-2016 PNUC_RS00890 ae7ca4a0d26888f4236a2ba69b9cbe24 389 PANTHER PTHR22926:SF5 175 389 2.0E-156 T 22-04-2016 PNUC_RS00890 ae7ca4a0d26888f4236a2ba69b9cbe24 389 ProSitePatterns PS01348 MraY family signature 2. 212 223 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS00890 ae7ca4a0d26888f4236a2ba69b9cbe24 389 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS00890 ae7ca4a0d26888f4236a2ba69b9cbe24 389 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 179 389 1.6E-82 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS00890 ae7ca4a0d26888f4236a2ba69b9cbe24 389 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 387 23.502 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS00890 ae7ca4a0d26888f4236a2ba69b9cbe24 389 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.8E-6 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS00890 ae7ca4a0d26888f4236a2ba69b9cbe24 389 Pfam PF00953 Glycosyl transferase family 4 99 307 2.8E-34 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS01675 dfb579e86593decfbcffd6aae890d93b 455 Pfam PF14524 Wzt C-terminal domain 305 441 8.9E-35 T 22-04-2016 IPR029439 Wzt, C-terminal PNUC_RS01675 dfb579e86593decfbcffd6aae890d93b 455 SMART SM00382 62 233 1.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS01675 dfb579e86593decfbcffd6aae890d93b 455 Pfam PF00005 ABC transporter 53 185 1.1E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS01675 dfb579e86593decfbcffd6aae890d93b 455 Gene3D G3DSA:3.40.50.300 5 257 1.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01675 dfb579e86593decfbcffd6aae890d93b 455 SUPERFAMILY SSF52540 45 247 1.04E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01675 dfb579e86593decfbcffd6aae890d93b 455 Gene3D G3DSA:2.70.50.60 300 440 3.5E-40 T 22-04-2016 PNUC_RS01675 dfb579e86593decfbcffd6aae890d93b 455 PANTHER PTHR24220 50 371 6.1E-93 T 22-04-2016 PNUC_RS01675 dfb579e86593decfbcffd6aae890d93b 455 PANTHER PTHR24220 9 19 6.1E-93 T 22-04-2016 PNUC_RS01675 dfb579e86593decfbcffd6aae890d93b 455 PANTHER PTHR24220:SF117 50 371 6.1E-93 T 22-04-2016 PNUC_RS01675 dfb579e86593decfbcffd6aae890d93b 455 PANTHER PTHR24220:SF117 9 19 6.1E-93 T 22-04-2016 PNUC_RS01675 dfb579e86593decfbcffd6aae890d93b 455 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS08535 0c947869c5b74060a40a94fccde9bfca 223 PANTHER PTHR36452:SF1 5 222 2.2E-19 T 22-04-2016 PNUC_RS08535 0c947869c5b74060a40a94fccde9bfca 223 PIRSF PIRSF028451 3 223 1.8E-56 T 22-04-2016 IPR015996 Uncharacterised conserved protein UCP028451 PNUC_RS08535 0c947869c5b74060a40a94fccde9bfca 223 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 7 217 9.9E-55 T 22-04-2016 IPR012808 Conserved hypothetical protein CHP02453 PNUC_RS08535 0c947869c5b74060a40a94fccde9bfca 223 PANTHER PTHR36452 5 222 2.2E-19 T 22-04-2016 PNUC_RS08535 0c947869c5b74060a40a94fccde9bfca 223 Pfam PF09365 Conserved hypothetical protein (DUF2461) 11 217 9.4E-48 T 22-04-2016 IPR012808 Conserved hypothetical protein CHP02453 PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 SMART SM00382 33 332 1.4E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 9 1326 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 Pfam PF00271 Helicase conserved C-terminal domain 247 365 1.8E-8 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 SMART SM00490 268 366 6.2E-11 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 Pfam PF04408 Helicase associated domain (HA2) 428 511 8.7E-14 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 Gene3D G3DSA:3.40.50.300 17 178 2.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 PANTHER PTHR18934:SF109 719 749 2.5E-268 T 22-04-2016 PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 Pfam PF11898 Domain of unknown function (DUF3418) 692 1327 3.5E-202 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 PANTHER PTHR18934:SF109 5 678 2.5E-268 T 22-04-2016 PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 PANTHER PTHR18934:SF109 768 867 2.5E-268 T 22-04-2016 PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 PANTHER PTHR18934 5 678 2.5E-268 T 22-04-2016 PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 PANTHER PTHR18934 768 867 2.5E-268 T 22-04-2016 PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 PANTHER PTHR18934 719 749 2.5E-268 T 22-04-2016 PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 SMART SM00847 426 529 1.7E-26 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 546 677 1.0E-12 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 Pfam PF00270 DEAD/DEAH box helicase 22 177 7.3E-8 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 Gene3D G3DSA:3.40.50.300 234 379 1.6E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 SUPERFAMILY SSF52540 17 537 7.13E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06615 440338257f99ea1152a0d9a7972f581c 1330 SMART SM00487 15 207 2.3E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PNUC_RS03860 9bacecc0711a401ac726f0632075bacf 342 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 88 311 3.9E-50 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PNUC_RS03860 9bacecc0711a401ac726f0632075bacf 342 SUPERFAMILY SSF56601 93 328 1.0E-56 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS03860 9bacecc0711a401ac726f0632075bacf 342 SUPERFAMILY SSF56601 3 31 1.0E-56 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS03860 9bacecc0711a401ac726f0632075bacf 342 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 169 186 3.2E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PNUC_RS03860 9bacecc0711a401ac726f0632075bacf 342 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 196 209 3.2E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PNUC_RS03860 9bacecc0711a401ac726f0632075bacf 342 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 132 3.2E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PNUC_RS03860 9bacecc0711a401ac726f0632075bacf 342 PANTHER PTHR21581:SF8 93 327 2.3E-77 T 22-04-2016 PNUC_RS03860 9bacecc0711a401ac726f0632075bacf 342 PANTHER PTHR21581 93 327 2.3E-77 T 22-04-2016 PNUC_RS03860 9bacecc0711a401ac726f0632075bacf 342 Gene3D G3DSA:3.40.710.10 88 328 7.4E-64 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 PANTHER PTHR18919 1 394 1.7E-178 T 22-04-2016 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 SUPERFAMILY SSF53901 272 393 3.29E-43 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 PANTHER PTHR18919:SF95 1 394 1.7E-178 T 22-04-2016 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 Gene3D G3DSA:3.40.47.10 146 194 1.0E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 Gene3D G3DSA:3.40.47.10 278 393 1.0E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 Gene3D G3DSA:3.40.47.10 4 125 2.7E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 Gene3D G3DSA:3.40.47.10 195 276 2.7E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 PIRSF PIRSF000429 1 394 5.7E-121 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 SUPERFAMILY SSF53901 4 270 1.04E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 8.3E-133 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 Pfam PF00108 Thiolase, N-terminal domain 5 262 8.2E-84 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PNUC_RS04825 05c919cb498fb7e80adf3104aef5dc92 394 Pfam PF02803 Thiolase, C-terminal domain 272 393 7.4E-47 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PNUC_RS05475 a26d16e9fe8035d8213f90466abfb296 199 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 32 161 1.1E-41 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 PNUC_RS05475 a26d16e9fe8035d8213f90466abfb296 199 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 168 34.025 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 PNUC_RS05475 a26d16e9fe8035d8213f90466abfb296 199 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 148 3.0E-23 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 PNUC_RS05475 a26d16e9fe8035d8213f90466abfb296 199 PANTHER PTHR10884 1 178 3.2E-68 T 22-04-2016 PNUC_RS05475 a26d16e9fe8035d8213f90466abfb296 199 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 32 159 1.6E-39 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 PNUC_RS05475 a26d16e9fe8035d8213f90466abfb296 199 SUPERFAMILY SSF143243 8 180 3.79E-54 T 22-04-2016 PNUC_RS05475 a26d16e9fe8035d8213f90466abfb296 199 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 121 142 - T 22-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 PNUC_RS03755 72b6741f49047d2865436f3820658286 471 SUPERFAMILY SSF102114 17 457 1.83E-133 T 22-04-2016 PNUC_RS03755 72b6741f49047d2865436f3820658286 471 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 17 470 4.1E-183 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 PNUC_RS03755 72b6741f49047d2865436f3820658286 471 Pfam PF06969 HemN C-terminal domain 377 445 6.3E-7 T 22-04-2016 IPR010723 HemN, C-terminal PNUC_RS03755 72b6741f49047d2865436f3820658286 471 Gene3D G3DSA:3.80.30.20 64 261 5.5E-27 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PNUC_RS03755 72b6741f49047d2865436f3820658286 471 SMART SM00729 63 286 1.2E-46 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PNUC_RS03755 72b6741f49047d2865436f3820658286 471 PANTHER PTHR13932 8 465 4.5E-211 T 22-04-2016 PNUC_RS03755 72b6741f49047d2865436f3820658286 471 PIRSF PIRSF000167 14 468 5.4E-159 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 PNUC_RS03755 72b6741f49047d2865436f3820658286 471 Pfam PF04055 Radical SAM superfamily 69 242 4.3E-21 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PNUC_RS03755 72b6741f49047d2865436f3820658286 471 PANTHER PTHR13932:SF6 8 465 4.5E-211 T 22-04-2016 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 Gene3D G3DSA:1.10.10.60 351 385 2.5E-34 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 Gene3D G3DSA:1.10.10.60 428 483 2.5E-34 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 480 4.0E-195 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 Gene3D G3DSA:3.40.50.2300 2 120 1.5E-31 T 22-04-2016 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 463 8.0E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 463 483 8.0E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 SMART SM00448 2 113 2.2E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 SMART SM00382 160 303 1.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 SUPERFAMILY SSF52540 139 382 1.96E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 SUPERFAMILY SSF52172 2 185 1.22E-38 T 22-04-2016 IPR011006 CheY-like superfamily PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 Pfam PF00158 Sigma-54 interaction domain 140 306 4.1E-63 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 SUPERFAMILY SSF46689 409 483 1.57E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 PANTHER PTHR32071:SF15 1 483 1.2E-203 T 22-04-2016 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 Pfam PF02954 Bacterial regulatory protein, Fis family 442 480 2.7E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 Pfam PF00072 Response regulator receiver domain 4 113 3.4E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 PANTHER PTHR32071 1 483 1.2E-203 T 22-04-2016 PNUC_RS06575 648ba6489462295c7c7594dc81ed4a91 484 Gene3D G3DSA:3.40.50.300 138 312 5.4E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 PANTHER PTHR11938:SF1 21 951 0.0 T 22-04-2016 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 PANTHER PTHR11938:SF1 1527 1578 0.0 T 22-04-2016 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 PANTHER PTHR11938:SF1 972 1501 0.0 T 22-04-2016 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 PANTHER PTHR11938 1527 1578 0.0 T 22-04-2016 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 PANTHER PTHR11938 972 1501 0.0 T 22-04-2016 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 Gene3D G3DSA:2.160.20.60 1291 1582 5.3E-106 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 Gene3D G3DSA:3.20.20.70 481 826 4.4E-111 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 SUPERFAMILY SSF51395 485 1281 1.75E-263 T 22-04-2016 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 Pfam PF04898 Glutamate synthase central domain 489 775 3.0E-113 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 Gene3D G3DSA:3.20.20.70 835 1272 5.9E-181 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 Pfam PF00310 Glutamine amidotransferases class-II 32 455 9.9E-186 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 Pfam PF01493 GXGXG motif 1316 1499 3.5E-80 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 PANTHER PTHR11938 21 951 0.0 T 22-04-2016 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 SUPERFAMILY SSF69336 1285 1575 1.83E-93 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 Pfam PF01645 Conserved region in glutamate synthase 836 1236 3.6E-153 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 Gene3D G3DSA:3.60.20.10 32 466 8.4E-187 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS00525 8f32f31a47f142638f7ff481048e0aff 1587 SUPERFAMILY SSF56235 32 457 7.03E-153 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS00435 e604f872e6cd2b1fc1c631c87eb0ce97 135 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 16 132 2.1E-56 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00435 e604f872e6cd2b1fc1c631c87eb0ce97 135 PIRSF PIRSF002131 3 135 1.2E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00435 e604f872e6cd2b1fc1c631c87eb0ce97 135 Pfam PF00411 Ribosomal protein S11 25 134 9.0E-51 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00435 e604f872e6cd2b1fc1c631c87eb0ce97 135 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 135 33.043 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00435 e604f872e6cd2b1fc1c631c87eb0ce97 135 PANTHER PTHR11759 17 135 2.2E-68 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00435 e604f872e6cd2b1fc1c631c87eb0ce97 135 Gene3D G3DSA:3.30.420.80 12 135 8.9E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00435 e604f872e6cd2b1fc1c631c87eb0ce97 135 ProSitePatterns PS00054 Ribosomal protein S11 signature. 103 125 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site PNUC_RS00435 e604f872e6cd2b1fc1c631c87eb0ce97 135 SUPERFAMILY SSF53137 20 135 1.37E-46 T 22-04-2016 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 SUPERFAMILY SSF51412 215 477 3.53E-127 T 22-04-2016 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 SUPERFAMILY SSF51412 2 89 3.53E-127 T 22-04-2016 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 486 84.561 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 473 1.8E-164 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 PANTHER PTHR11911:SF6 1 279 7.0E-247 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 PANTHER PTHR11911:SF6 297 484 7.0E-247 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 SMART SM00116 156 204 2.4E-10 T 22-04-2016 IPR000644 CBS domain PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 SMART SM00116 95 142 9.4E-9 T 22-04-2016 IPR000644 CBS domain PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 SUPERFAMILY SSF54631 94 202 1.71E-28 T 22-04-2016 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 PANTHER PTHR11911 1 279 7.0E-247 T 22-04-2016 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 PANTHER PTHR11911 297 484 7.0E-247 T 22-04-2016 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 454 3.5E-191 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 Pfam PF00571 CBS domain 94 138 4.8E-8 T 22-04-2016 IPR000644 CBS domain PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 Pfam PF00571 CBS domain 153 202 6.9E-10 T 22-04-2016 IPR000644 CBS domain PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 SMART SM01240 6 473 0.0 T 22-04-2016 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 Gene3D G3DSA:3.20.20.70 4 485 9.6E-203 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS07450 f81d967bcefd07941061aa4398b3bcd5 487 PIRSF PIRSF000130 1 487 5.0E-206 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PNUC_RS08625 3db587d7b400327aad72c3d7eafce3f8 255 Pfam PF01061 ABC-2 type transporter 8 218 1.7E-35 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 PNUC_RS08625 3db587d7b400327aad72c3d7eafce3f8 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 101 126 2.4E-15 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS08625 3db587d7b400327aad72c3d7eafce3f8 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 195 214 2.4E-15 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS08625 3db587d7b400327aad72c3d7eafce3f8 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 175 194 2.4E-15 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS08625 3db587d7b400327aad72c3d7eafce3f8 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 57 79 2.4E-15 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS08625 3db587d7b400327aad72c3d7eafce3f8 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 138 162 2.4E-15 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS08625 3db587d7b400327aad72c3d7eafce3f8 255 PANTHER PTHR30413 1 255 7.2E-115 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS08625 3db587d7b400327aad72c3d7eafce3f8 255 PANTHER PTHR30413:SF5 1 255 7.2E-115 T 22-04-2016 PNUC_RS08625 3db587d7b400327aad72c3d7eafce3f8 255 PIRSF PIRSF006648 9 255 6.6E-31 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS03435 a493b2438b837a44d6de0daf8c378d55 500 Gene3D G3DSA:3.40.50.300 6 241 1.1E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03435 a493b2438b837a44d6de0daf8c378d55 500 Gene3D G3DSA:3.40.50.300 242 390 5.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03435 a493b2438b837a44d6de0daf8c378d55 500 PANTHER PTHR24031 19 495 1.8E-165 T 22-04-2016 PNUC_RS03435 a493b2438b837a44d6de0daf8c378d55 500 SUPERFAMILY SSF52540 97 383 3.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03435 a493b2438b837a44d6de0daf8c378d55 500 PANTHER PTHR24031:SF261 19 495 1.8E-165 T 22-04-2016 PNUC_RS03435 a493b2438b837a44d6de0daf8c378d55 500 SMART SM00487 38 244 9.4E-50 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PNUC_RS03435 a493b2438b837a44d6de0daf8c378d55 500 SMART SM00490 281 362 6.2E-34 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS03435 a493b2438b837a44d6de0daf8c378d55 500 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 175 183 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PNUC_RS03435 a493b2438b837a44d6de0daf8c378d55 500 Pfam PF00270 DEAD/DEAH box helicase 43 214 1.6E-44 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PNUC_RS03435 a493b2438b837a44d6de0daf8c378d55 500 Pfam PF00271 Helicase conserved C-terminal domain 260 362 1.9E-26 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS01185 ef49054e483e174d96db2047e157b3bd 190 Pfam PF04608 Phosphatidylglycerophosphatase A 22 180 6.5E-49 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 PNUC_RS01185 ef49054e483e174d96db2047e157b3bd 190 SUPERFAMILY SSF101307 15 178 4.84E-26 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 PNUC_RS01185 ef49054e483e174d96db2047e157b3bd 190 PANTHER PTHR36305 158 185 1.8E-36 T 22-04-2016 PNUC_RS01185 ef49054e483e174d96db2047e157b3bd 190 PANTHER PTHR36305 7 141 1.8E-36 T 22-04-2016 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 SUPERFAMILY SSF82693 40 133 1.29E-20 T 22-04-2016 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 SUPERFAMILY SSF82714 708 793 2.09E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 PANTHER PTHR32063:SF21 1 1015 0.0 T 22-04-2016 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 4.54E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 4.54E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 4.54E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 4.54E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.54E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 4.54E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 4.54E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 4.54E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.54E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 SUPERFAMILY SSF82866 792 1016 1.16E-45 T 22-04-2016 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 SUPERFAMILY SSF82866 291 490 1.96E-46 T 22-04-2016 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 Gene3D G3DSA:3.30.2090.10 183 266 1.0E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 Gene3D G3DSA:3.30.2090.10 708 790 2.4E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 Gene3D G3DSA:1.10.3850.10 799 1015 3.0E-52 T 22-04-2016 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 Gene3D G3DSA:1.10.3850.10 274 491 1.6E-58 T 22-04-2016 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 SUPERFAMILY SSF82693 557 653 2.38E-13 T 22-04-2016 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 SUPERFAMILY SSF82693 136 182 5.93E-22 T 22-04-2016 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 SUPERFAMILY SSF82693 268 324 5.93E-22 T 22-04-2016 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 PANTHER PTHR32063 1 1015 0.0 T 22-04-2016 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 Gene3D G3DSA:3.30.70.1430 560 648 3.3E-9 T 22-04-2016 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 SUPERFAMILY SSF82714 183 266 3.01E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 Pfam PF00873 AcrB/AcrD/AcrF family 4 1013 2.1E-298 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS05360 23faa8ef45593f0b7f8a0eb424639c31 1032 Gene3D G3DSA:3.30.70.1430 40 141 1.7E-26 T 22-04-2016 PNUC_RS02675 dd84fe5fe15e094e4bc5ae5a0bb8da99 311 Gene3D G3DSA:3.40.50.620 2 182 9.7E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS02675 dd84fe5fe15e094e4bc5ae5a0bb8da99 311 SUPERFAMILY SSF52402 3 186 2.85E-52 T 22-04-2016 PNUC_RS02675 dd84fe5fe15e094e4bc5ae5a0bb8da99 311 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site PNUC_RS02675 dd84fe5fe15e094e4bc5ae5a0bb8da99 311 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 3.7E-35 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal PNUC_RS02675 dd84fe5fe15e094e4bc5ae5a0bb8da99 311 SUPERFAMILY SSF52467 189 310 1.02E-45 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PNUC_RS02675 dd84fe5fe15e094e4bc5ae5a0bb8da99 311 PANTHER PTHR10909:SF294 104 307 4.1E-118 T 22-04-2016 PNUC_RS02675 dd84fe5fe15e094e4bc5ae5a0bb8da99 311 PIRSF PIRSF000089 1 311 5.3E-104 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 PNUC_RS02675 dd84fe5fe15e094e4bc5ae5a0bb8da99 311 PANTHER PTHR10909 104 307 4.1E-118 T 22-04-2016 PNUC_RS02675 dd84fe5fe15e094e4bc5ae5a0bb8da99 311 Pfam PF01012 Electron transfer flavoprotein domain 4 171 1.4E-36 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PNUC_RS02675 dd84fe5fe15e094e4bc5ae5a0bb8da99 311 Gene3D G3DSA:3.40.50.1220 184 310 1.8E-59 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PNUC_RS02675 dd84fe5fe15e094e4bc5ae5a0bb8da99 311 SMART SM00893 3 182 1.5E-53 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PNUC_RS08475 5525007f0be90ea4c7a78108e856513d 199 Pfam PF11604 Copper binding periplasmic protein CusF 143 188 3.0E-4 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF PNUC_RS01900 cccde72c549e3740389d6dd9a65bf56c 80 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 69 3.0E-18 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor PNUC_RS01900 cccde72c549e3740389d6dd9a65bf56c 80 PANTHER PTHR40613:SF1 1 71 5.0E-24 T 22-04-2016 PNUC_RS01900 cccde72c549e3740389d6dd9a65bf56c 80 PANTHER PTHR40613 1 71 5.0E-24 T 22-04-2016 PNUC_RS01900 cccde72c549e3740389d6dd9a65bf56c 80 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 67 1.4E-29 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor PNUC_RS07545 788f3113c0c3352bd7ac424a17d2803e 175 SUPERFAMILY SSF111384 32 172 1.2E-32 T 22-04-2016 IPR024930 Skp domain PNUC_RS07545 788f3113c0c3352bd7ac424a17d2803e 175 SMART SM00935 17 172 2.0E-51 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 PNUC_RS07545 788f3113c0c3352bd7ac424a17d2803e 175 PANTHER PTHR35089:SF1 8 172 5.8E-33 T 22-04-2016 PNUC_RS07545 788f3113c0c3352bd7ac424a17d2803e 175 PIRSF PIRSF002094 5 175 8.8E-43 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 PNUC_RS07545 788f3113c0c3352bd7ac424a17d2803e 175 Gene3D G3DSA:3.30.910.20 106 172 4.5E-27 T 22-04-2016 PNUC_RS07545 788f3113c0c3352bd7ac424a17d2803e 175 Gene3D G3DSA:3.30.910.20 22 68 4.5E-27 T 22-04-2016 PNUC_RS07545 788f3113c0c3352bd7ac424a17d2803e 175 PANTHER PTHR35089 8 172 5.8E-33 T 22-04-2016 PNUC_RS07545 788f3113c0c3352bd7ac424a17d2803e 175 Pfam PF03938 Outer membrane protein (OmpH-like) 15 171 1.4E-31 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 PNUC_RS10195 d67972a8934a3e318050282a6b2de77b 270 Hamap MF_01274 Type III pantothenate kinase [coaX]. 3 270 18.163 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 PNUC_RS10195 d67972a8934a3e318050282a6b2de77b 270 SUPERFAMILY SSF53067 133 266 1.14E-25 T 22-04-2016 PNUC_RS10195 d67972a8934a3e318050282a6b2de77b 270 Gene3D G3DSA:3.30.420.40 104 268 3.1E-37 T 22-04-2016 PNUC_RS10195 d67972a8934a3e318050282a6b2de77b 270 Pfam PF03309 Type III pantothenate kinase 4 213 8.7E-50 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 PNUC_RS10195 d67972a8934a3e318050282a6b2de77b 270 PANTHER PTHR34265 4 269 6.6E-38 T 22-04-2016 PNUC_RS10195 d67972a8934a3e318050282a6b2de77b 270 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 5 238 3.8E-27 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 PNUC_RS10195 d67972a8934a3e318050282a6b2de77b 270 SUPERFAMILY SSF53067 4 129 2.46E-19 T 22-04-2016 PNUC_RS05450 74421c599173cdec0a64b5e93da97dbd 357 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 67 82 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 PNUC_RS05450 74421c599173cdec0a64b5e93da97dbd 357 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 233 246 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 PNUC_RS05450 74421c599173cdec0a64b5e93da97dbd 357 Pfam PF00146 NADH dehydrogenase 28 345 4.4E-127 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 PNUC_RS05450 74421c599173cdec0a64b5e93da97dbd 357 PANTHER PTHR11432:SF3 6 357 7.1E-170 T 22-04-2016 PNUC_RS05450 74421c599173cdec0a64b5e93da97dbd 357 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 21 352 24.691 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 PNUC_RS05450 74421c599173cdec0a64b5e93da97dbd 357 PANTHER PTHR11432 6 357 7.1E-170 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 PNUC_RS01905 0f3dd979022cb1f0ee42092b51f7fece 348 SMART SM00892 53 243 2.4E-23 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 PNUC_RS01905 0f3dd979022cb1f0ee42092b51f7fece 348 Pfam PF01223 DNA/RNA non-specific endonuclease 45 237 1.5E-34 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 PNUC_RS01905 0f3dd979022cb1f0ee42092b51f7fece 348 Gene3D G3DSA:3.40.570.10 30 239 5.4E-53 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 PNUC_RS01905 0f3dd979022cb1f0ee42092b51f7fece 348 PANTHER PTHR13966 52 214 2.1E-26 T 22-04-2016 PNUC_RS01905 0f3dd979022cb1f0ee42092b51f7fece 348 SMART SM00477 54 243 1.2E-25 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 PNUC_RS01905 0f3dd979022cb1f0ee42092b51f7fece 348 SUPERFAMILY SSF54060 32 236 3.59E-54 T 22-04-2016 PNUC_RS03380 f9d456088518ae5bb7c77dcacc1c8189 276 Gene3D G3DSA:3.10.20.10 37 119 5.3E-18 T 22-04-2016 PNUC_RS03380 f9d456088518ae5bb7c77dcacc1c8189 276 Pfam PF02634 FdhD/NarQ family 36 273 1.9E-72 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 PNUC_RS03380 f9d456088518ae5bb7c77dcacc1c8189 276 Gene3D G3DSA:3.40.140.10 133 274 2.2E-45 T 22-04-2016 PNUC_RS03380 f9d456088518ae5bb7c77dcacc1c8189 276 PANTHER PTHR30592:SF2 2 275 1.4E-110 T 22-04-2016 PNUC_RS03380 f9d456088518ae5bb7c77dcacc1c8189 276 PANTHER PTHR30592 2 275 1.4E-110 T 22-04-2016 PNUC_RS03380 f9d456088518ae5bb7c77dcacc1c8189 276 SUPERFAMILY SSF53927 18 274 1.02E-65 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PNUC_RS03380 f9d456088518ae5bb7c77dcacc1c8189 276 PIRSF PIRSF015626 1 276 1.1E-73 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 PNUC_RS06465 5380ea88256a11ae758d5e13748970c5 254 SUPERFAMILY SSF46785 90 165 2.79E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS06465 5380ea88256a11ae758d5e13748970c5 254 Gene3D G3DSA:1.10.10.10 11 86 2.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS06465 5380ea88256a11ae758d5e13748970c5 254 PANTHER PTHR34298 2 253 3.0E-55 T 22-04-2016 PNUC_RS06465 5380ea88256a11ae758d5e13748970c5 254 Pfam PF04079 Segregation and condensation complex subunit ScpB 16 172 2.1E-48 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 PNUC_RS06465 5380ea88256a11ae758d5e13748970c5 254 SUPERFAMILY SSF46785 12 87 2.26E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS06465 5380ea88256a11ae758d5e13748970c5 254 PANTHER PTHR34298:SF2 2 253 3.0E-55 T 22-04-2016 PNUC_RS06465 5380ea88256a11ae758d5e13748970c5 254 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 14 178 1.1E-32 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 PNUC_RS06465 5380ea88256a11ae758d5e13748970c5 254 Gene3D G3DSA:1.10.10.10 89 165 3.4E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS05210 4a18e79b77f59ab13d7628af8e904e5c 267 Gene3D G3DSA:3.40.1010.10 21 133 7.8E-37 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PNUC_RS05210 4a18e79b77f59ab13d7628af8e904e5c 267 PANTHER PTHR21091:SF16 21 220 4.9E-48 T 22-04-2016 PNUC_RS05210 4a18e79b77f59ab13d7628af8e904e5c 267 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 21 220 9.6E-38 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PNUC_RS05210 4a18e79b77f59ab13d7628af8e904e5c 267 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 98 131 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PNUC_RS05210 4a18e79b77f59ab13d7628af8e904e5c 267 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 21 244 2.6E-68 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PNUC_RS05210 4a18e79b77f59ab13d7628af8e904e5c 267 SUPERFAMILY SSF53790 19 244 3.14E-53 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PNUC_RS05210 4a18e79b77f59ab13d7628af8e904e5c 267 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 24 38 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PNUC_RS05210 4a18e79b77f59ab13d7628af8e904e5c 267 Gene3D G3DSA:3.30.950.10 135 245 4.9E-18 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PNUC_RS05210 4a18e79b77f59ab13d7628af8e904e5c 267 PANTHER PTHR21091 21 220 4.9E-48 T 22-04-2016 PNUC_RS03295 ad76c9b003d0a1f607f3d7c2daf436fe 507 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 22-04-2016 IPR020845 AMP-binding, conserved site PNUC_RS03295 ad76c9b003d0a1f607f3d7c2daf436fe 507 Pfam PF00501 AMP-binding enzyme 14 411 1.1E-89 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PNUC_RS03295 ad76c9b003d0a1f607f3d7c2daf436fe 507 PANTHER PTHR24096:SF206 1 504 1.4E-185 T 22-04-2016 PNUC_RS03295 ad76c9b003d0a1f607f3d7c2daf436fe 507 Gene3D G3DSA:2.30.38.10 324 404 3.8E-28 T 22-04-2016 PNUC_RS03295 ad76c9b003d0a1f607f3d7c2daf436fe 507 Gene3D G3DSA:3.30.300.30 406 505 1.3E-29 T 22-04-2016 PNUC_RS03295 ad76c9b003d0a1f607f3d7c2daf436fe 507 PANTHER PTHR24096 1 504 1.4E-185 T 22-04-2016 PNUC_RS03295 ad76c9b003d0a1f607f3d7c2daf436fe 507 Gene3D G3DSA:3.40.50.980 3 165 5.8E-33 T 22-04-2016 PNUC_RS03295 ad76c9b003d0a1f607f3d7c2daf436fe 507 Pfam PF13193 AMP-binding enzyme C-terminal domain 420 495 4.6E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PNUC_RS03295 ad76c9b003d0a1f607f3d7c2daf436fe 507 SUPERFAMILY SSF56801 3 506 4.97E-137 T 22-04-2016 PNUC_RS03295 ad76c9b003d0a1f607f3d7c2daf436fe 507 Gene3D G3DSA:3.40.50.980 166 323 5.7E-39 T 22-04-2016 PNUC_RS02145 f061e50e9897160769a0c43e38a70f21 130 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 103 2.3E-15 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PNUC_RS02145 f061e50e9897160769a0c43e38a70f21 130 SUPERFAMILY SSF56214 1 127 7.85E-24 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PNUC_RS02145 f061e50e9897160769a0c43e38a70f21 130 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 129 6.0E-21 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PNUC_RS02145 f061e50e9897160769a0c43e38a70f21 130 Gene3D G3DSA:3.90.470.20 1 127 8.0E-32 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PNUC_RS02145 f061e50e9897160769a0c43e38a70f21 130 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 129 23.601 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PNUC_RS02145 f061e50e9897160769a0c43e38a70f21 130 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 103 2.0E-31 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PNUC_RS02145 f061e50e9897160769a0c43e38a70f21 130 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 129 1.4E-25 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PNUC_RS07530 6caf772cc297c4a69697f9546ce0cded 265 SUPERFAMILY SSF51161 2 241 5.0E-73 T 22-04-2016 IPR011004 Trimeric LpxA-like PNUC_RS07530 6caf772cc297c4a69697f9546ce0cded 265 PANTHER PTHR23416:SF8 1 257 3.6E-119 T 22-04-2016 PNUC_RS07530 6caf772cc297c4a69697f9546ce0cded 265 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 263 1.7E-102 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PNUC_RS07530 6caf772cc297c4a69697f9546ce0cded 265 Gene3D G3DSA:1.20.1180.10 193 265 1.2E-24 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PNUC_RS07530 6caf772cc297c4a69697f9546ce0cded 265 Gene3D G3DSA:2.160.10.10 2 190 2.6E-48 T 22-04-2016 PNUC_RS07530 6caf772cc297c4a69697f9546ce0cded 265 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 265 45.821 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PNUC_RS07530 6caf772cc297c4a69697f9546ce0cded 265 PIRSF PIRSF000456 1 265 5.1E-103 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PNUC_RS07530 6caf772cc297c4a69697f9546ce0cded 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 139 3.6E-9 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS07530 6caf772cc297c4a69697f9546ce0cded 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 48 2.6E-9 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS07530 6caf772cc297c4a69697f9546ce0cded 265 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 264 1.5E-27 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PNUC_RS07530 6caf772cc297c4a69697f9546ce0cded 265 PANTHER PTHR23416 1 257 3.6E-119 T 22-04-2016 PNUC_RS01630 8a5793a9508ca25bf71f62387b23a023 454 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 27 454 1.5E-148 T 22-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 PNUC_RS01630 8a5793a9508ca25bf71f62387b23a023 454 PANTHER PTHR30576 2 454 3.7E-156 T 22-04-2016 PNUC_RS01630 8a5793a9508ca25bf71f62387b23a023 454 Pfam PF13727 CoA-binding domain 70 174 1.8E-16 T 22-04-2016 PNUC_RS01630 8a5793a9508ca25bf71f62387b23a023 454 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 39 454 4.7E-133 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PNUC_RS01630 8a5793a9508ca25bf71f62387b23a023 454 PANTHER PTHR30576:SF0 2 454 3.7E-156 T 22-04-2016 PNUC_RS01630 8a5793a9508ca25bf71f62387b23a023 454 Pfam PF02397 Bacterial sugar transferase 264 446 9.8E-57 T 22-04-2016 IPR003362 Bacterial sugar transferase PNUC_RS09055 45be33d20bd2f693cca8062e08852875 403 PANTHER PTHR14359:SF20 2 403 1.7E-151 T 22-04-2016 PNUC_RS09055 45be33d20bd2f693cca8062e08852875 403 PANTHER PTHR14359 2 403 1.7E-151 T 22-04-2016 PNUC_RS09055 45be33d20bd2f693cca8062e08852875 403 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 399 6.3E-129 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 PNUC_RS09055 45be33d20bd2f693cca8062e08852875 403 SUPERFAMILY SSF102645 176 401 2.88E-60 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 PNUC_RS09055 45be33d20bd2f693cca8062e08852875 403 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 375 1.3E-56 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 PNUC_RS09055 45be33d20bd2f693cca8062e08852875 403 SUPERFAMILY SSF52507 2 182 2.88E-62 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 PNUC_RS09055 45be33d20bd2f693cca8062e08852875 403 Pfam PF02441 Flavoprotein 7 135 1.2E-35 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 PNUC_RS09055 45be33d20bd2f693cca8062e08852875 403 Gene3D G3DSA:3.40.50.1950 3 186 1.1E-67 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 PNUC_RS09055 45be33d20bd2f693cca8062e08852875 403 Gene3D G3DSA:3.40.50.10300 187 402 3.4E-69 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 PNUC_RS00680 0cd824e473cf18e246b85daede7c29a4 200 PANTHER PTHR10134 17 199 4.9E-73 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 PNUC_RS00680 0cd824e473cf18e246b85daede7c29a4 200 PRINTS PR00162 Rieske 2Fe-2S subunit signature 167 179 1.8E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PNUC_RS00680 0cd824e473cf18e246b85daede7c29a4 200 PRINTS PR00162 Rieske 2Fe-2S subunit signature 154 166 1.8E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PNUC_RS00680 0cd824e473cf18e246b85daede7c29a4 200 PRINTS PR00162 Rieske 2Fe-2S subunit signature 122 133 1.8E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PNUC_RS00680 0cd824e473cf18e246b85daede7c29a4 200 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 1 40 8.1E-16 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 PNUC_RS00680 0cd824e473cf18e246b85daede7c29a4 200 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 10 195 7.9E-67 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 PNUC_RS00680 0cd824e473cf18e246b85daede7c29a4 200 PANTHER PTHR10134:SF8 17 199 4.9E-73 T 22-04-2016 PNUC_RS00680 0cd824e473cf18e246b85daede7c29a4 200 Gene3D G3DSA:1.20.5.510 8 40 1.9E-7 T 22-04-2016 PNUC_RS00680 0cd824e473cf18e246b85daede7c29a4 200 Gene3D G3DSA:2.102.10.10 48 194 2.5E-35 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PNUC_RS00680 0cd824e473cf18e246b85daede7c29a4 200 Pfam PF00355 Rieske [2Fe-2S] domain 59 182 4.7E-11 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PNUC_RS00680 0cd824e473cf18e246b85daede7c29a4 200 SUPERFAMILY SSF50022 31 194 1.07E-41 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PNUC_RS06095 81cf850bcb81fc6d9ceb9ede7169f555 149 PANTHER PTHR11908:SF82 1 133 2.1E-33 T 22-04-2016 PNUC_RS06095 81cf850bcb81fc6d9ceb9ede7169f555 149 PANTHER PTHR11908 1 133 2.1E-33 T 22-04-2016 PNUC_RS06095 81cf850bcb81fc6d9ceb9ede7169f555 149 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 58 2.3E-8 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS06095 81cf850bcb81fc6d9ceb9ede7169f555 149 Gene3D G3DSA:3.10.20.30 3 73 6.6E-30 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS06095 81cf850bcb81fc6d9ceb9ede7169f555 149 SUPERFAMILY SSF54292 3 77 1.97E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS06095 81cf850bcb81fc6d9ceb9ede7169f555 149 Pfam PF01799 [2Fe-2S] binding domain 72 143 1.3E-24 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PNUC_RS06095 81cf850bcb81fc6d9ceb9ede7169f555 149 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PNUC_RS06095 81cf850bcb81fc6d9ceb9ede7169f555 149 SUPERFAMILY SSF47741 83 148 4.45E-26 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PNUC_RS06095 81cf850bcb81fc6d9ceb9ede7169f555 149 Gene3D G3DSA:1.10.150.120 74 148 4.7E-28 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 Gene3D G3DSA:3.40.50.300 25 81 3.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 Gene3D G3DSA:3.40.50.300 133 193 3.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 Gene3D G3DSA:3.40.50.300 375 481 3.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 SUPERFAMILY SSF52540 29 85 1.85E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 SUPERFAMILY SSF52540 365 520 1.85E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 SUPERFAMILY SSF52540 841 870 1.85E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 SUPERFAMILY SSF52540 125 201 1.85E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 SUPERFAMILY SSF52540 913 944 1.85E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 SUPERFAMILY SSF52540 587 809 1.85E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 Gene3D G3DSA:3.40.50.300 833 964 1.6E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 Gene3D G3DSA:3.40.50.300 498 648 1.6E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 PANTHER PTHR11070 125 203 6.1E-76 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 PANTHER PTHR11070 912 934 6.1E-76 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 PANTHER PTHR11070 582 780 6.1E-76 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 PANTHER PTHR11070 29 94 6.1E-76 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 PANTHER PTHR11070 818 882 6.1E-76 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 PANTHER PTHR11070 340 550 6.1E-76 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 Pfam PF13361 UvrD-like helicase C-terminal domain 616 934 4.2E-20 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 Pfam PF00580 UvrD/REP helicase N-terminal domain 29 480 1.2E-47 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 Gene3D G3DSA:1.10.486.10 658 799 3.1E-17 T 22-04-2016 PNUC_RS06845 51c43a4701a631a067d2e831e9b3a4cd 1185 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1031 1174 1.3E-4 T 22-04-2016 PNUC_RS03635 6c5d6897b23ee01f910d601733a7ecca 444 SUPERFAMILY SSF51338 29 87 2.68E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS03635 6c5d6897b23ee01f910d601733a7ecca 444 Pfam PF01979 Amidohydrolase family 84 439 3.2E-27 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PNUC_RS03635 6c5d6897b23ee01f910d601733a7ecca 444 Gene3D G3DSA:3.20.20.140 90 374 7.0E-76 T 22-04-2016 PNUC_RS03635 6c5d6897b23ee01f910d601733a7ecca 444 PANTHER PTHR11271:SF33 24 439 2.6E-80 T 22-04-2016 PNUC_RS03635 6c5d6897b23ee01f910d601733a7ecca 444 Gene3D G3DSA:2.30.40.10 27 89 7.0E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS03635 6c5d6897b23ee01f910d601733a7ecca 444 Gene3D G3DSA:2.30.40.10 410 443 7.0E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS03635 6c5d6897b23ee01f910d601733a7ecca 444 Gene3D G3DSA:2.30.40.10 375 409 7.0E-5 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS03635 6c5d6897b23ee01f910d601733a7ecca 444 SUPERFAMILY SSF51556 88 388 4.57E-69 T 22-04-2016 IPR032466 Metal-dependent hydrolase PNUC_RS03635 6c5d6897b23ee01f910d601733a7ecca 444 PANTHER PTHR11271 24 439 2.6E-80 T 22-04-2016 PNUC_RS03635 6c5d6897b23ee01f910d601733a7ecca 444 SUPERFAMILY SSF51338 372 444 6.72E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS09645 900111c024be6cdc091edb799877a423 448 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PNUC_RS09645 900111c024be6cdc091edb799877a423 448 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 440 8.7E-147 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 PNUC_RS09645 900111c024be6cdc091edb799877a423 448 PANTHER PTHR11918 1 444 6.0E-184 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein PNUC_RS09645 900111c024be6cdc091edb799877a423 448 Pfam PF01938 TRAM domain 378 443 4.5E-11 T 22-04-2016 IPR002792 TRAM domain PNUC_RS09645 900111c024be6cdc091edb799877a423 448 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 444 70.715 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 PNUC_RS09645 900111c024be6cdc091edb799877a423 448 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 443 1.4E-170 T 22-04-2016 PNUC_RS09645 900111c024be6cdc091edb799877a423 448 Pfam PF00919 Uncharacterized protein family UPF0004 3 103 4.9E-30 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 PNUC_RS09645 900111c024be6cdc091edb799877a423 448 Gene3D G3DSA:3.80.30.20 147 380 7.7E-79 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PNUC_RS09645 900111c024be6cdc091edb799877a423 448 SUPERFAMILY SSF102114 128 372 2.62E-61 T 22-04-2016 PNUC_RS09645 900111c024be6cdc091edb799877a423 448 PANTHER PTHR11918:SF43 1 444 6.0E-184 T 22-04-2016 PNUC_RS09645 900111c024be6cdc091edb799877a423 448 SMART SM00729 146 367 2.7E-57 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PNUC_RS09645 900111c024be6cdc091edb799877a423 448 Pfam PF04055 Radical SAM superfamily 150 324 1.2E-28 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PNUC_RS01190 81d69f821cd6225b004a1188d7e629b6 339 Pfam PF00586 AIR synthase related protein, N-terminal domain 37 145 1.7E-26 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PNUC_RS01190 81d69f821cd6225b004a1188d7e629b6 339 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 9 322 3.6E-98 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PNUC_RS01190 81d69f821cd6225b004a1188d7e629b6 339 Gene3D G3DSA:3.30.1330.10 7 149 3.0E-47 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PNUC_RS01190 81d69f821cd6225b004a1188d7e629b6 339 SUPERFAMILY SSF56042 150 307 4.36E-34 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS01190 81d69f821cd6225b004a1188d7e629b6 339 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 8 330 28.824 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PNUC_RS01190 81d69f821cd6225b004a1188d7e629b6 339 Gene3D G3DSA:3.90.650.10 153 337 6.6E-40 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS01190 81d69f821cd6225b004a1188d7e629b6 339 PIRSF PIRSF005303 3 322 1.1E-83 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PNUC_RS01190 81d69f821cd6225b004a1188d7e629b6 339 SUPERFAMILY SSF55326 6 146 1.96E-37 T 22-04-2016 PNUC_RS01190 81d69f821cd6225b004a1188d7e629b6 339 PANTHER PTHR30270 8 303 2.6E-102 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PNUC_RS01190 81d69f821cd6225b004a1188d7e629b6 339 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 307 5.2E-7 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS01190 81d69f821cd6225b004a1188d7e629b6 339 PANTHER PTHR30270:SF0 8 303 2.6E-102 T 22-04-2016 PNUC_RS01115 bf9bfdd1cbb0c2d2c39e82817fb6551c 506 PANTHER PTHR18895:SF69 16 341 7.1E-83 T 22-04-2016 PNUC_RS01115 bf9bfdd1cbb0c2d2c39e82817fb6551c 506 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 306 4.2E-84 T 22-04-2016 PNUC_RS01115 bf9bfdd1cbb0c2d2c39e82817fb6551c 506 PANTHER PTHR18895 16 341 7.1E-83 T 22-04-2016 PNUC_RS01115 bf9bfdd1cbb0c2d2c39e82817fb6551c 506 SUPERFAMILY SSF53335 55 289 1.13E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01115 bf9bfdd1cbb0c2d2c39e82817fb6551c 506 Pfam PF11906 Protein of unknown function (DUF3426) 335 502 2.5E-9 T 22-04-2016 IPR021834 Protein of unknown function DUF3426 PNUC_RS01115 bf9bfdd1cbb0c2d2c39e82817fb6551c 506 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 308 31.327 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PNUC_RS01115 bf9bfdd1cbb0c2d2c39e82817fb6551c 506 Gene3D G3DSA:3.40.50.150 113 304 9.5E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01115 bf9bfdd1cbb0c2d2c39e82817fb6551c 506 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 302 2.2E-67 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PNUC_RS07780 ed4decb005dae490f51e2678068b1f9a 112 SUPERFAMILY SSF54292 5 108 1.31E-30 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS07780 ed4decb005dae490f51e2678068b1f9a 112 PRINTS PR00355 Adrenodoxin signature 60 74 4.7E-8 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 PNUC_RS07780 ed4decb005dae490f51e2678068b1f9a 112 PRINTS PR00355 Adrenodoxin signature 83 91 4.7E-8 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 PNUC_RS07780 ed4decb005dae490f51e2678068b1f9a 112 PRINTS PR00355 Adrenodoxin signature 42 52 4.7E-8 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 PNUC_RS07780 ed4decb005dae490f51e2678068b1f9a 112 PANTHER PTHR23426 7 112 2.4E-35 T 22-04-2016 PNUC_RS07780 ed4decb005dae490f51e2678068b1f9a 112 Gene3D G3DSA:3.10.20.30 7 103 4.4E-33 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS07780 ed4decb005dae490f51e2678068b1f9a 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 3 111 6.1E-54 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 PNUC_RS07780 ed4decb005dae490f51e2678068b1f9a 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 5.5E-13 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS09260 02c043965c28e57cc4640014ec079d68 426 PIRSF PIRSF000139 7 424 4.8E-114 T 22-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit PNUC_RS09260 02c043965c28e57cc4640014ec079d68 426 Gene3D G3DSA:1.10.1060.10 12 104 1.9E-23 T 22-04-2016 PNUC_RS09260 02c043965c28e57cc4640014ec079d68 426 SUPERFAMILY SSF46548 10 102 2.25E-22 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PNUC_RS09260 02c043965c28e57cc4640014ec079d68 426 PANTHER PTHR32479 14 416 2.6E-110 T 22-04-2016 PNUC_RS09260 02c043965c28e57cc4640014ec079d68 426 PANTHER PTHR32479:SF2 14 416 2.6E-110 T 22-04-2016 PNUC_RS09260 02c043965c28e57cc4640014ec079d68 426 Pfam PF12838 4Fe-4S dicluster domain 24 89 8.0E-13 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS09260 02c043965c28e57cc4640014ec079d68 426 Pfam PF02754 Cysteine-rich domain 181 263 1.0E-9 T 22-04-2016 IPR004017 Cysteine-rich domain PNUC_RS09260 02c043965c28e57cc4640014ec079d68 426 Pfam PF02754 Cysteine-rich domain 313 400 1.9E-9 T 22-04-2016 IPR004017 Cysteine-rich domain PNUC_RS09260 02c043965c28e57cc4640014ec079d68 426 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS09260 02c043965c28e57cc4640014ec079d68 426 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS08735 66076370b1a9703ec4f30a7d14240ee3 409 Pfam PF02321 Outer membrane efflux protein 27 194 2.1E-6 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PNUC_RS08735 66076370b1a9703ec4f30a7d14240ee3 409 Pfam PF02321 Outer membrane efflux protein 230 395 9.2E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PNUC_RS08735 66076370b1a9703ec4f30a7d14240ee3 409 SUPERFAMILY SSF56954 1 407 8.76E-37 T 22-04-2016 PNUC_RS08735 66076370b1a9703ec4f30a7d14240ee3 409 Gene3D G3DSA:1.20.1600.10 26 398 7.0E-20 T 22-04-2016 PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 PANTHER PTHR24322 14 140 5.3E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 PANTHER PTHR24322 156 188 5.3E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 247 2.3E-65 T 22-04-2016 PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.8E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.8E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 4.8E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.8E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.8E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 4.8E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 SUPERFAMILY SSF51735 10 249 2.45E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 Gene3D G3DSA:3.40.50.720 3 249 6.6E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 6.2E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.2E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08040 3bfc62de3cc612fc4080a28c63002ac7 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.2E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS09600 d55dd7aa4fbeef25103a46df049ebad0 556 SUPERFAMILY SSF103473 10 328 6.15E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS09600 d55dd7aa4fbeef25103a46df049ebad0 556 PANTHER PTHR23508:SF7 455 552 3.2E-222 T 22-04-2016 PNUC_RS09600 d55dd7aa4fbeef25103a46df049ebad0 556 PANTHER PTHR23508:SF7 10 340 3.2E-222 T 22-04-2016 PNUC_RS09600 d55dd7aa4fbeef25103a46df049ebad0 556 SUPERFAMILY SSF103473 454 551 6.15E-10 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS09600 d55dd7aa4fbeef25103a46df049ebad0 556 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PNUC_RS09600 d55dd7aa4fbeef25103a46df049ebad0 556 PANTHER PTHR23508 455 552 3.2E-222 T 22-04-2016 PNUC_RS09600 d55dd7aa4fbeef25103a46df049ebad0 556 PANTHER PTHR23508 10 340 3.2E-222 T 22-04-2016 PNUC_RS09600 d55dd7aa4fbeef25103a46df049ebad0 556 Pfam PF07690 Major Facilitator Superfamily 23 343 4.1E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS09600 d55dd7aa4fbeef25103a46df049ebad0 556 Pfam PF00083 Sugar (and other) transporter 446 551 1.4E-5 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PNUC_RS09600 d55dd7aa4fbeef25103a46df049ebad0 556 Gene3D G3DSA:1.20.1250.20 245 330 9.2E-24 T 22-04-2016 PNUC_RS09600 d55dd7aa4fbeef25103a46df049ebad0 556 Gene3D G3DSA:1.20.1250.20 453 548 9.2E-24 T 22-04-2016 PNUC_RS09600 d55dd7aa4fbeef25103a46df049ebad0 556 Gene3D G3DSA:1.20.1250.20 15 222 9.2E-25 T 22-04-2016 PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 46 256 3.8E-52 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 ProSitePatterns PS00760 Signal peptidases I lysine active site. 126 138 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 SUPERFAMILY SSF51306 58 264 1.36E-67 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 Pfam PF10502 Signal peptidase, peptidase S26 217 255 1.8E-6 T 22-04-2016 IPR019533 Peptidase S26 PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 PANTHER PTHR12383 9 170 7.3E-80 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 PANTHER PTHR12383 200 266 7.3E-80 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 Gene3D G3DSA:2.10.109.10 218 263 3.8E-56 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 Gene3D G3DSA:2.10.109.10 56 134 3.8E-56 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 Pfam PF00717 Peptidase S24-like 66 148 3.6E-22 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 218 237 8.8E-24 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 124 136 8.8E-24 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 60 76 8.8E-24 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 PANTHER PTHR12383:SF27 9 170 7.3E-80 T 22-04-2016 PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 PANTHER PTHR12383:SF27 200 266 7.3E-80 T 22-04-2016 PNUC_RS02120 c72417514ecd19ac88ed714d2c5c833c 268 ProSitePatterns PS00501 Signal peptidases I serine active site. 69 76 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 PNUC_RS04465 f55c18f65346e37bb0b52d2c01577cc0 218 PANTHER PTHR10242 19 212 6.2E-58 T 22-04-2016 PNUC_RS04465 f55c18f65346e37bb0b52d2c01577cc0 218 SMART SM00478 59 212 8.1E-16 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PNUC_RS04465 f55c18f65346e37bb0b52d2c01577cc0 218 Gene3D G3DSA:1.10.340.30 50 157 2.2E-32 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PNUC_RS04465 f55c18f65346e37bb0b52d2c01577cc0 218 SUPERFAMILY SSF48150 44 210 2.09E-41 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PNUC_RS04465 f55c18f65346e37bb0b52d2c01577cc0 218 Gene3D G3DSA:1.10.1670.10 160 215 9.7E-18 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PNUC_RS04465 f55c18f65346e37bb0b52d2c01577cc0 218 PANTHER PTHR10242:SF0 19 212 6.2E-58 T 22-04-2016 PNUC_RS04465 f55c18f65346e37bb0b52d2c01577cc0 218 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 56 193 1.8E-12 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PNUC_RS08350 2a395dcb482909165bc3055ace5c99b8 340 PANTHER PTHR30570:SF0 8 333 7.0E-112 T 22-04-2016 PNUC_RS08350 2a395dcb482909165bc3055ace5c99b8 340 Pfam PF12849 PBP superfamily domain 24 307 4.0E-58 T 22-04-2016 IPR024370 PBP domain PNUC_RS08350 2a395dcb482909165bc3055ace5c99b8 340 PIRSF PIRSF002756 5 339 2.2E-94 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 PNUC_RS08350 2a395dcb482909165bc3055ace5c99b8 340 Gene3D G3DSA:3.40.190.10 179 333 1.1E-23 T 22-04-2016 PNUC_RS08350 2a395dcb482909165bc3055ace5c99b8 340 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 25 333 2.8E-108 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 PNUC_RS08350 2a395dcb482909165bc3055ace5c99b8 340 Gene3D G3DSA:3.40.190.10 23 166 3.0E-48 T 22-04-2016 PNUC_RS08350 2a395dcb482909165bc3055ace5c99b8 340 PANTHER PTHR30570 8 333 7.0E-112 T 22-04-2016 PNUC_RS08350 2a395dcb482909165bc3055ace5c99b8 340 SUPERFAMILY SSF53850 25 333 3.02E-87 T 22-04-2016 PNUC_RS06960 fbdc29fc4285bf00bd44b3d4c7917404 241 SUPERFAMILY SSF53639 3 227 4.71E-31 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal PNUC_RS06960 fbdc29fc4285bf00bd44b3d4c7917404 241 PANTHER PTHR22789 1 231 8.3E-19 T 22-04-2016 PNUC_RS06960 fbdc29fc4285bf00bd44b3d4c7917404 241 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 198 1.9E-29 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal PNUC_RS06960 fbdc29fc4285bf00bd44b3d4c7917404 241 Gene3D G3DSA:3.40.225.10 9 222 4.3E-38 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal PNUC_RS06960 fbdc29fc4285bf00bd44b3d4c7917404 241 SMART SM01007 12 199 8.4E-21 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal PNUC_RS06960 fbdc29fc4285bf00bd44b3d4c7917404 241 PANTHER PTHR22789:SF0 1 231 8.3E-19 T 22-04-2016 PNUC_RS01000 34bb7479a4956a5b31f29cec96782bd0 360 Gene3D G3DSA:3.30.450.90 3 116 4.4E-37 T 22-04-2016 PNUC_RS01000 34bb7479a4956a5b31f29cec96782bd0 360 PANTHER PTHR30258:SF1 6 319 3.0E-127 T 22-04-2016 PNUC_RS01000 34bb7479a4956a5b31f29cec96782bd0 360 SUPERFAMILY SSF52540 4 327 1.01E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01000 34bb7479a4956a5b31f29cec96782bd0 360 Gene3D G3DSA:3.40.50.300 123 350 2.6E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01000 34bb7479a4956a5b31f29cec96782bd0 360 PANTHER PTHR30258 6 319 3.0E-127 T 22-04-2016 PNUC_RS01000 34bb7479a4956a5b31f29cec96782bd0 360 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 212 226 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PNUC_RS01000 34bb7479a4956a5b31f29cec96782bd0 360 Pfam PF00437 Type II/IV secretion system protein 18 284 9.0E-74 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PIRSF PIRSF000350 42 588 1.1E-82 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 Gene3D G3DSA:3.50.50.60 119 270 9.5E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 Gene3D G3DSA:3.50.50.60 387 461 2.7E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 Gene3D G3DSA:3.50.50.60 278 386 3.7E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PANTHER PTHR22912:SF160 257 580 1.4E-249 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PANTHER PTHR22912:SF160 106 235 1.4E-249 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 Gene3D G3DSA:2.40.50.100 6 79 3.4E-22 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 120 583 7.5E-142 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 121 449 1.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 SUPERFAMILY SSF51230 4 94 5.89E-23 T 22-04-2016 IPR011053 Single hybrid motif PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 Gene3D G3DSA:3.30.390.30 463 581 1.5E-45 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 385 401 3.54E-40 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 315 3.54E-40 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 414 436 3.54E-40 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 277 3.54E-40 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 122 141 3.54E-40 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 SUPERFAMILY SSF51905 117 458 4.82E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 Pfam PF00364 Biotin-requiring enzyme 5 76 2.4E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 SUPERFAMILY SSF55424 464 588 1.89E-39 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 155 165 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PANTHER PTHR22912 257 580 1.4E-249 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PANTHER PTHR22912 106 235 1.4E-249 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 400 2.04E-69 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 169 2.04E-69 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 464 485 2.04E-69 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 529 544 2.04E-69 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 551 571 2.04E-69 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 121 143 2.04E-69 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 271 2.04E-69 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 436 2.04E-69 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 322 2.04E-69 T 22-04-2016 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 468 576 8.9E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PNUC_RS03845 bd0b8d3b646dfab5a6d612caf0c8c72f 594 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Gene3D G3DSA:3.40.50.2000 955 1019 4.1E-11 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SUPERFAMILY SSF48452 1204 1420 1.23E-38 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SUPERFAMILY SSF52540 351 580 4.56E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 1275 1308 1.8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 687 720 7.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 1309 1342 11.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 653 686 4.7E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 1105 1138 36.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 44 77 52.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 1343 1376 0.0062 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 1173 1206 6.1E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 1449 1482 18.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 1139 1172 0.064 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 180 213 2.7E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 146 179 4.0E-9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 1207 1240 0.0038 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 1377 1410 8.5E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 78 111 0.18 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 214 247 0.15 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 619 652 480.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 1241 1274 0.039 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00028 1071 1104 160.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00671 1377 1408 200.0 T 22-04-2016 IPR006597 Sel1-like repeat PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00671 180 211 21.0 T 22-04-2016 IPR006597 Sel1-like repeat PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00671 146 177 1.1 T 22-04-2016 IPR006597 Sel1-like repeat PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00671 214 245 160.0 T 22-04-2016 IPR006597 Sel1-like repeat PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Gene3D G3DSA:1.25.40.10 619 737 2.0E-58 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Gene3D G3DSA:1.25.40.10 41 310 9.8E-52 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Gene3D G3DSA:1.25.40.10 1073 1217 2.0E-58 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Gene3D G3DSA:1.25.40.10 1218 1272 9.1E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00386 160 192 29.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00386 1391 1425 290.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00386 701 735 700.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00386 1357 1389 460.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SMART SM00386 58 90 130.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SUPERFAMILY SSF48452 1076 1206 1.39E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 955 988 2.2E-5 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 PANTHER PTHR23083 1134 1417 4.1E-95 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 PANTHER PTHR23083 649 715 4.1E-95 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 PANTHER PTHR23083 48 108 4.1E-95 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 PANTHER PTHR23083 143 213 4.1E-95 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF13181 Tetratricopeptide repeat 689 719 0.0041 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF13181 Tetratricopeptide repeat 1208 1240 4.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Gene3D G3DSA:1.25.40.10 1273 1479 3.2E-36 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF13469 Sulfotransferase family 1519 1708 5.2E-41 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF13469 Sulfotransferase family 356 544 1.5E-45 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SUPERFAMILY SSF48452 48 257 3.54E-36 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF07719 Tetratricopeptide repeat 654 685 9.0E-6 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF13374 Tetratricopeptide repeat 1242 1272 0.0048 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Gene3D G3DSA:3.40.50.300 1511 1743 3.0E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Gene3D G3DSA:3.40.50.300 353 579 5.9E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SUPERFAMILY SSF53756 779 1019 7.85E-21 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SUPERFAMILY SSF48452 621 746 1.45E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF00515 Tetratricopeptide repeat 147 179 2.4E-10 T 22-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF13432 Tetratricopeptide repeat 1280 1341 4.8E-4 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF13432 Tetratricopeptide repeat 185 243 1.2E-7 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF13432 Tetratricopeptide repeat 1081 1136 1.9E-4 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF13432 Tetratricopeptide repeat 55 108 0.001 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 Pfam PF13432 Tetratricopeptide repeat 1348 1410 1.0E-5 T 22-04-2016 PNUC_RS05730 0e4cb59ba8d002a6c2aba49e88cecd33 1764 SUPERFAMILY SSF52540 1514 1757 4.93E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02085 01a30bfb4d9243f7c09e7d24d396305d 328 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 239 328 1.2E-34 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PNUC_RS02085 01a30bfb4d9243f7c09e7d24d396305d 328 SUPERFAMILY SSF53901 5 327 5.19E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS02085 01a30bfb4d9243f7c09e7d24d396305d 328 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 327 2.9E-125 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PNUC_RS02085 01a30bfb4d9243f7c09e7d24d396305d 328 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 116 193 4.8E-35 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PNUC_RS02085 01a30bfb4d9243f7c09e7d24d396305d 328 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 328 69.064 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PNUC_RS02085 01a30bfb4d9243f7c09e7d24d396305d 328 Gene3D G3DSA:3.40.47.10 171 327 2.7E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS02085 01a30bfb4d9243f7c09e7d24d396305d 328 PANTHER PTHR18919:SF109 33 328 1.2E-127 T 22-04-2016 PNUC_RS02085 01a30bfb4d9243f7c09e7d24d396305d 328 Gene3D G3DSA:3.40.47.10 6 170 8.2E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS02085 01a30bfb4d9243f7c09e7d24d396305d 328 PANTHER PTHR18919 33 328 1.2E-127 T 22-04-2016 PNUC_RS08090 1401d04e0c2f92ce139a348a741729e5 446 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 17 125 6.1E-6 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 PNUC_RS08090 1401d04e0c2f92ce139a348a741729e5 446 Pfam PF08666 SAF domain 361 425 4.6E-5 T 22-04-2016 IPR013974 SAF domain PNUC_RS08090 1401d04e0c2f92ce139a348a741729e5 446 SUPERFAMILY SSF51735 14 150 1.52E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08090 1401d04e0c2f92ce139a348a741729e5 446 PANTHER PTHR37850 1 444 1.3E-163 T 22-04-2016 PNUC_RS08090 1401d04e0c2f92ce139a348a741729e5 446 PANTHER PTHR37850:SF2 1 444 1.3E-163 T 22-04-2016 PNUC_RS08090 1401d04e0c2f92ce139a348a741729e5 446 SMART SM00858 361 426 8.5E-7 T 22-04-2016 IPR013974 SAF domain PNUC_RS08090 1401d04e0c2f92ce139a348a741729e5 446 Gene3D G3DSA:3.40.50.720 13 170 1.5E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS04160 bb79a2a852c0f25f6c6a890ad4042476 413 SUPERFAMILY SSF51905 7 108 1.51E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04160 bb79a2a852c0f25f6c6a890ad4042476 413 SUPERFAMILY SSF51905 205 332 1.51E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04160 bb79a2a852c0f25f6c6a890ad4042476 413 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 317 9.2E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04160 bb79a2a852c0f25f6c6a890ad4042476 413 PANTHER PTHR10632:SF2 6 406 6.8E-169 T 22-04-2016 PNUC_RS04160 bb79a2a852c0f25f6c6a890ad4042476 413 Gene3D G3DSA:3.50.50.60 10 123 1.6E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04160 bb79a2a852c0f25f6c6a890ad4042476 413 Gene3D G3DSA:3.50.50.60 266 332 1.6E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04160 bb79a2a852c0f25f6c6a890ad4042476 413 PANTHER PTHR10632 6 406 6.8E-169 T 22-04-2016 PNUC_RS05035 904f29adc523aaec87cc203e73476585 263 PIRSF PIRSF005902 1 261 2.2E-81 T 22-04-2016 IPR001130 TatD family GO:0016788 PNUC_RS05035 904f29adc523aaec87cc203e73476585 263 Gene3D G3DSA:3.20.20.140 1 259 1.1E-87 T 22-04-2016 PNUC_RS05035 904f29adc523aaec87cc203e73476585 263 PANTHER PTHR10060:SF20 1 260 1.5E-120 T 22-04-2016 PNUC_RS05035 904f29adc523aaec87cc203e73476585 263 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 257 3.5E-83 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 PNUC_RS05035 904f29adc523aaec87cc203e73476585 263 SUPERFAMILY SSF51556 2 258 9.01E-87 T 22-04-2016 IPR032466 Metal-dependent hydrolase PNUC_RS05035 904f29adc523aaec87cc203e73476585 263 Pfam PF01026 TatD related DNase 3 256 7.1E-77 T 22-04-2016 IPR001130 TatD family GO:0016788 PNUC_RS05035 904f29adc523aaec87cc203e73476585 263 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PNUC_RS05035 904f29adc523aaec87cc203e73476585 263 PANTHER PTHR10060 1 260 1.5E-120 T 22-04-2016 IPR001130 TatD family GO:0016788 PNUC_RS05035 904f29adc523aaec87cc203e73476585 263 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 128 138 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PNUC_RS04520 86100b55db63a5a8dc6db5cc91b46b99 428 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 115 336 2.7E-8 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PNUC_RS04520 86100b55db63a5a8dc6db5cc91b46b99 428 Gene3D G3DSA:2.40.50.100 120 153 6.0E-13 T 22-04-2016 PNUC_RS04520 86100b55db63a5a8dc6db5cc91b46b99 428 Gene3D G3DSA:2.40.50.100 214 241 6.0E-13 T 22-04-2016 PNUC_RS04520 86100b55db63a5a8dc6db5cc91b46b99 428 PANTHER PTHR30158 52 425 2.3E-80 T 22-04-2016 PNUC_RS04520 86100b55db63a5a8dc6db5cc91b46b99 428 SUPERFAMILY SSF111369 110 343 1.06E-61 T 22-04-2016 PNUC_RS04520 86100b55db63a5a8dc6db5cc91b46b99 428 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 96 414 2.2E-66 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PNUC_RS02205 17af29a1dc7737725631064d939a2e1b 124 Gene3D G3DSA:3.30.70.60 1 104 9.7E-42 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PNUC_RS02205 17af29a1dc7737725631064d939a2e1b 124 Pfam PF01250 Ribosomal protein S6 3 91 1.9E-27 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS02205 17af29a1dc7737725631064d939a2e1b 124 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 5.5E-33 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS02205 17af29a1dc7737725631064d939a2e1b 124 SUPERFAMILY SSF54995 1 104 4.58E-37 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS02205 17af29a1dc7737725631064d939a2e1b 124 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.468 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS02205 17af29a1dc7737725631064d939a2e1b 124 PANTHER PTHR21011:SF1 1 118 2.0E-38 T 22-04-2016 PNUC_RS02205 17af29a1dc7737725631064d939a2e1b 124 PANTHER PTHR21011 1 118 2.0E-38 T 22-04-2016 PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 Gene3D G3DSA:3.40.50.20 1 129 7.1E-52 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 SUPERFAMILY SSF56059 83 348 2.65E-71 T 22-04-2016 PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 1.2E-44 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 2.9E-224 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 7.5E-82 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 SUPERFAMILY SSF51246 331 445 6.28E-42 T 22-04-2016 IPR011054 Rudiment single hybrid motif PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 3.6E-37 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 Gene3D G3DSA:3.30.1490.20 130 203 1.2E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 PANTHER PTHR18866 1 446 2.6E-291 T 22-04-2016 PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 SUPERFAMILY SSF52440 1 113 1.29E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 SMART SM00878 336 441 2.2E-62 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal PNUC_RS01120 7d85e987f231c0dff89cf0385759263c 454 Gene3D G3DSA:3.30.470.20 204 446 3.4E-96 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 Pfam PF00890 FAD binding domain 14 409 3.3E-116 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 PANTHER PTHR11632 3 587 0.0 T 22-04-2016 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 Gene3D G3DSA:3.50.50.60 6 247 2.2E-117 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 Gene3D G3DSA:3.50.50.60 355 425 2.2E-117 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 PANTHER PTHR11632:SF5 3 587 0.0 T 22-04-2016 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 Gene3D G3DSA:3.90.700.10 248 354 2.2E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 SUPERFAMILY SSF46977 457 592 2.49E-44 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 592 5.1E-279 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 Pfam PF02910 Fumarate reductase flavoprotein C-term 466 591 5.5E-40 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 PIRSF PIRSF000171 4 583 8.8E-43 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 Gene3D G3DSA:4.10.80.40 560 592 5.7E-23 T 22-04-2016 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 591 7.3E-238 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 9.3E-6 T 22-04-2016 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 394 9.3E-6 T 22-04-2016 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 Gene3D G3DSA:1.20.58.100 450 559 3.0E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 SUPERFAMILY SSF56425 241 359 1.23E-43 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 SUPERFAMILY SSF51905 363 432 5.77E-76 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03965 fca5a5244c91ad3945e268e4f329e9f7 592 SUPERFAMILY SSF51905 10 264 5.77E-76 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 70 77 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 Gene3D G3DSA:3.40.50.1370 23 167 6.6E-48 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 21 326 40.551 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 156 167 4.8E-18 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 277 286 4.8E-18 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 289 312 4.8E-18 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 70 89 4.8E-18 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 PANTHER PTHR11405:SF16 23 325 3.2E-119 T 22-04-2016 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 23 323 3.8E-93 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 175 321 5.7E-27 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 SUPERFAMILY SSF53671 22 325 6.02E-94 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 98 107 3.5E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 155 172 3.5E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 281 286 3.5E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 60 82 3.5E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 305 319 3.5E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 240 249 3.5E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 PANTHER PTHR11405 23 325 3.2E-119 T 22-04-2016 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 23 168 7.3E-36 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PNUC_RS01305 be35abfaf3deea3a35e7b357d2702d5c 326 Gene3D G3DSA:3.40.50.1370 168 303 6.4E-50 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS03120 3dc247171e4ec41e4c16f9dbf08955b5 364 PANTHER PTHR30002 7 363 2.4E-147 T 22-04-2016 PNUC_RS03120 3dc247171e4ec41e4c16f9dbf08955b5 364 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 22 363 1.4E-134 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS03120 3dc247171e4ec41e4c16f9dbf08955b5 364 Pfam PF08331 Domain of unknown function (DUF1730) 67 148 3.6E-23 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS03120 3dc247171e4ec41e4c16f9dbf08955b5 364 Gene3D G3DSA:3.30.70.20 198 266 4.0E-6 T 22-04-2016 PNUC_RS03120 3dc247171e4ec41e4c16f9dbf08955b5 364 PANTHER PTHR30002:SF4 7 363 2.4E-147 T 22-04-2016 PNUC_RS03120 3dc247171e4ec41e4c16f9dbf08955b5 364 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 201 212 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS03120 3dc247171e4ec41e4c16f9dbf08955b5 364 SUPERFAMILY SSF54862 177 322 1.42E-18 T 22-04-2016 PNUC_RS03120 3dc247171e4ec41e4c16f9dbf08955b5 364 Pfam PF13484 4Fe-4S double cluster binding domain 200 264 1.0E-19 T 22-04-2016 PNUC_RS03120 3dc247171e4ec41e4c16f9dbf08955b5 364 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 12 323 47.021 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS08375 d28b4fc65bff622f8e9f4b3baa32e959 511 PANTHER PTHR38657:SF1 1 511 2.1E-202 T 22-04-2016 PNUC_RS08375 d28b4fc65bff622f8e9f4b3baa32e959 511 SUPERFAMILY SSF48173 230 491 7.19E-56 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain PNUC_RS08375 d28b4fc65bff622f8e9f4b3baa32e959 511 Gene3D G3DSA:1.25.40.80 229 312 5.0E-10 T 22-04-2016 PNUC_RS08375 d28b4fc65bff622f8e9f4b3baa32e959 511 PANTHER PTHR38657 1 511 2.1E-202 T 22-04-2016 PNUC_RS08375 d28b4fc65bff622f8e9f4b3baa32e959 511 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 8 229 2.7E-76 T 22-04-2016 IPR007357 Deoxyribodipyrimidine photolyase-related protein PNUC_RS08375 d28b4fc65bff622f8e9f4b3baa32e959 511 Gene3D G3DSA:1.10.579.10 313 435 3.5E-5 T 22-04-2016 PNUC_RS02430 6cd17c0b37b5d1e0de50ab60b57fc563 484 PANTHER PTHR21666 352 452 5.0E-34 T 22-04-2016 PNUC_RS02430 6cd17c0b37b5d1e0de50ab60b57fc563 484 Pfam PF01551 Peptidase family M23 355 451 5.4E-30 T 22-04-2016 IPR016047 Peptidase M23 PNUC_RS02430 6cd17c0b37b5d1e0de50ab60b57fc563 484 Gene3D G3DSA:2.70.70.10 290 452 6.1E-47 T 22-04-2016 PNUC_RS02430 6cd17c0b37b5d1e0de50ab60b57fc563 484 SUPERFAMILY SSF51261 346 452 1.46E-41 T 22-04-2016 IPR011055 Duplicated hybrid motif PNUC_RS10680 c0759f57d06ec2dac71925798f72f607 188 SUPERFAMILY SSF56349 3 187 9.42E-36 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PNUC_RS10680 c0759f57d06ec2dac71925798f72f607 188 PANTHER PTHR30349:SF20 2 186 9.9E-24 T 22-04-2016 PNUC_RS10680 c0759f57d06ec2dac71925798f72f607 188 Pfam PF00589 Phage integrase family 6 175 1.5E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS10680 c0759f57d06ec2dac71925798f72f607 188 Gene3D G3DSA:1.10.443.10 5 185 3.6E-35 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS10680 c0759f57d06ec2dac71925798f72f607 188 PANTHER PTHR30349 2 186 9.9E-24 T 22-04-2016 PNUC_RS10740 b18cf85157937545b95565dd51e01229 734 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 728 0.0 T 22-04-2016 IPR019938 YcaO domain protein PNUC_RS10740 b18cf85157937545b95565dd51e01229 734 Pfam PF02566 OsmC-like protein 32 126 1.7E-9 T 22-04-2016 IPR003718 OsmC/Ohr family PNUC_RS10740 b18cf85157937545b95565dd51e01229 734 PANTHER PTHR39624:SF1 25 138 2.3E-17 T 22-04-2016 PNUC_RS10740 b18cf85157937545b95565dd51e01229 734 Gene3D G3DSA:3.30.300.20 1 128 2.1E-29 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PNUC_RS10740 b18cf85157937545b95565dd51e01229 734 PANTHER PTHR39624 25 138 2.3E-17 T 22-04-2016 PNUC_RS10740 b18cf85157937545b95565dd51e01229 734 SUPERFAMILY SSF82784 1 129 4.32E-19 T 22-04-2016 IPR003718 OsmC/Ohr family PNUC_RS10740 b18cf85157937545b95565dd51e01229 734 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 551 3.0E-96 T 22-04-2016 IPR003776 YcaO-like domain PNUC_RS10740 b18cf85157937545b95565dd51e01229 734 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 3.3E-66 T 22-04-2016 IPR003776 YcaO-like domain PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 SUPERFAMILY SSF55103 671 774 3.43E-27 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 SUPERFAMILY SSF46548 785 903 2.09E-13 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 SUPERFAMILY SSF55103 446 564 5.23E-13 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 Pfam PF02754 Cysteine-rich domain 1142 1232 2.5E-4 T 22-04-2016 IPR004017 Cysteine-rich domain PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 Pfam PF02754 Cysteine-rich domain 1017 1106 7.4E-6 T 22-04-2016 IPR004017 Cysteine-rich domain PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 PANTHER PTHR11748:SF35 561 819 3.1E-36 T 22-04-2016 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 PANTHER PTHR11748:SF35 374 471 3.1E-36 T 22-04-2016 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 PANTHER PTHR11748:SF35 136 330 3.1E-36 T 22-04-2016 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 Gene3D G3DSA:3.30.43.10 138 298 5.6E-32 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 Gene3D G3DSA:1.10.1060.10 801 902 4.7E-13 T 22-04-2016 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 Pfam PF01565 FAD binding domain 180 326 2.2E-22 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 872 883 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 Pfam PF11880 Domain of unknown function (DUF3400) 1236 1279 1.0E-22 T 22-04-2016 IPR021817 Protein of unknown function DUF3400 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 Pfam PF12447 Protein of unknown function (DUF3683) 19 132 3.2E-50 T 22-04-2016 IPR022153 Protein of unknown function DUF3683 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 Pfam PF13183 4Fe-4S dicluster domain 807 886 7.0E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 PANTHER PTHR11748 561 819 3.1E-36 T 22-04-2016 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 PANTHER PTHR11748 374 471 3.1E-36 T 22-04-2016 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 PANTHER PTHR11748 136 330 3.1E-36 T 22-04-2016 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 Pfam PF02913 FAD linked oxidases, C-terminal domain 683 771 7.5E-18 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 Pfam PF02913 FAD linked oxidases, C-terminal domain 447 561 2.0E-4 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PNUC_RS09845 7de2a597eac980b7067beb196eeef777 1279 SUPERFAMILY SSF56176 143 413 6.13E-53 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PNUC_RS06930 803b954c10c7653046f9fe918d07534f 230 PANTHER PTHR11820:SF7 7 229 3.0E-89 T 22-04-2016 PNUC_RS06930 803b954c10c7653046f9fe918d07534f 230 PANTHER PTHR11820 7 229 3.0E-89 T 22-04-2016 PNUC_RS06930 803b954c10c7653046f9fe918d07534f 230 SUPERFAMILY SSF56529 23 229 3.92E-72 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS06930 803b954c10c7653046f9fe918d07534f 230 Gene3D G3DSA:3.90.850.10 24 229 1.2E-81 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS06930 803b954c10c7653046f9fe918d07534f 230 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 229 3.3E-54 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS09915 f63002253dd1acee98d27360f5bd804f 153 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PNUC_RS09915 f63002253dd1acee98d27360f5bd804f 153 PANTHER PTHR30505 1 149 2.4E-36 T 22-04-2016 PNUC_RS09915 f63002253dd1acee98d27360f5bd804f 153 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 148 7.6E-35 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PNUC_RS09915 f63002253dd1acee98d27360f5bd804f 153 SUPERFAMILY SSF55804 4 148 1.44E-38 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 PNUC_RS09915 f63002253dd1acee98d27360f5bd804f 153 Gene3D G3DSA:3.40.930.10 1 149 2.0E-43 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PNUC_RS05460 ab865040f2f7564e43d318f7942b4890 432 PANTHER PTHR11780:SF10 20 425 2.4E-213 T 22-04-2016 PNUC_RS05460 ab865040f2f7564e43d318f7942b4890 432 PANTHER PTHR11780 20 425 2.4E-213 T 22-04-2016 PNUC_RS05460 ab865040f2f7564e43d318f7942b4890 432 SMART SM00928 334 379 9.0E-27 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 PNUC_RS05460 ab865040f2f7564e43d318f7942b4890 432 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 337 419 5.3E-30 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 PNUC_RS05460 ab865040f2f7564e43d318f7942b4890 432 Pfam PF10531 SLBB domain 248 296 5.2E-12 T 22-04-2016 IPR019554 Soluble ligand binding domain PNUC_RS05460 ab865040f2f7564e43d318f7942b4890 432 SUPERFAMILY SSF142984 246 329 4.58E-24 T 22-04-2016 PNUC_RS05460 ab865040f2f7564e43d318f7942b4890 432 SUPERFAMILY SSF140490 331 426 7.85E-37 T 22-04-2016 PNUC_RS05460 ab865040f2f7564e43d318f7942b4890 432 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 224 3.2E-45 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain PNUC_RS05460 ab865040f2f7564e43d318f7942b4890 432 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 420 7.7E-188 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 PNUC_RS05460 ab865040f2f7564e43d318f7942b4890 432 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 347 358 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 PNUC_RS05460 ab865040f2f7564e43d318f7942b4890 432 SUPERFAMILY SSF142019 18 245 2.75E-80 T 22-04-2016 PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 427 575 3.4E-46 T 22-04-2016 IPR001162 UvrC family homology region PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 SUPERFAMILY SSF47781 540 642 2.48E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 14 622 4.0E-167 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 Pfam PF01541 GIY-YIG catalytic domain 25 96 1.7E-10 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 Gene3D G3DSA:1.10.150.20 589 642 1.2E-21 T 22-04-2016 PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 Gene3D G3DSA:4.10.860.10 189 249 1.6E-16 T 22-04-2016 IPR001943 UVR domain GO:0005515 PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 PANTHER PTHR30562 11 641 4.7E-224 T 22-04-2016 PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 SMART SM00465 23 104 1.5E-19 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 SUPERFAMILY SSF46600 196 248 1.57E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 Gene3D G3DSA:3.40.1440.10 24 103 2.0E-6 T 22-04-2016 IPR027299 GIY-YIG domain PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 Hamap MF_00203 UvrABC system protein C [uvrC]. 10 640 26.587 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 PANTHER PTHR30562:SF1 11 641 4.7E-224 T 22-04-2016 PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 SMART SM00278 621 640 370.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 SMART SM00278 589 608 0.98 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 Pfam PF02151 UvrB/uvrC motif 210 242 6.9E-7 T 22-04-2016 IPR001943 UVR domain GO:0005515 PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 SUPERFAMILY SSF82771 23 106 1.03E-20 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily PNUC_RS02170 9cd1c019ecb98cb939559792eb4054f9 642 Pfam PF14520 Helix-hairpin-helix domain 590 641 2.2E-6 T 22-04-2016 PNUC_RS09015 2c2fcb131ae22e0dfa3ca2fd03cadff6 77 SUPERFAMILY SSF143800 2 74 3.34E-30 T 22-04-2016 PNUC_RS09015 2c2fcb131ae22e0dfa3ca2fd03cadff6 77 Gene3D G3DSA:2.30.170.40 2 76 1.3E-36 T 22-04-2016 PNUC_RS09015 2c2fcb131ae22e0dfa3ca2fd03cadff6 77 Pfam PF00830 Ribosomal L28 family 3 62 5.3E-27 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 PNUC_RS09015 2c2fcb131ae22e0dfa3ca2fd03cadff6 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.185 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS09015 2c2fcb131ae22e0dfa3ca2fd03cadff6 77 PANTHER PTHR13528 1 68 1.7E-34 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 PNUC_RS09015 2c2fcb131ae22e0dfa3ca2fd03cadff6 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 9.5E-27 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 Gene3D G3DSA:2.40.30.10 4 93 2.5E-28 T 22-04-2016 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 Pfam PF00970 Oxidoreductase FAD-binding domain 16 90 6.4E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 Gene3D G3DSA:3.40.50.80 97 257 5.9E-45 T 22-04-2016 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 PANTHER PTHR19370 4 238 1.6E-111 T 22-04-2016 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 7.0E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 7.0E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 51 58 7.0E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 PANTHER PTHR19370:SF98 4 238 1.6E-111 T 22-04-2016 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 SUPERFAMILY SSF63380 6 98 5.2E-22 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 8.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 8.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 8.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 8.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 Pfam PF00175 Oxidoreductase NAD-binding domain 114 229 1.8E-7 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PNUC_RS07735 177b6d8dc0d15b48ead46ad05a4ba6e0 258 SUPERFAMILY SSF52343 102 256 1.83E-39 T 22-04-2016 PNUC_RS06990 a681aa810edc75c1ee8be355ca61aca4 252 Pfam PF13531 Bacterial extracellular solute-binding protein 27 249 2.1E-38 T 22-04-2016 PNUC_RS06990 a681aa810edc75c1ee8be355ca61aca4 252 PIRSF PIRSF004846 3 252 1.5E-55 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 PNUC_RS06990 a681aa810edc75c1ee8be355ca61aca4 252 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 30 248 2.0E-52 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 PNUC_RS06990 a681aa810edc75c1ee8be355ca61aca4 252 PANTHER PTHR30632 6 249 3.3E-31 T 22-04-2016 PNUC_RS06990 a681aa810edc75c1ee8be355ca61aca4 252 SUPERFAMILY SSF53850 27 252 5.94E-48 T 22-04-2016 PNUC_RS06990 a681aa810edc75c1ee8be355ca61aca4 252 Gene3D G3DSA:3.40.190.10 27 147 3.6E-29 T 22-04-2016 PNUC_RS03280 8fde8959177f5ca4cb54e089b3c96d6d 344 PANTHER PTHR33376 8 339 8.0E-60 T 22-04-2016 PNUC_RS03280 8fde8959177f5ca4cb54e089b3c96d6d 344 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 326 1.2E-42 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PNUC_RS03280 8fde8959177f5ca4cb54e089b3c96d6d 344 PANTHER PTHR33376:SF2 8 339 8.0E-60 T 22-04-2016 PNUC_RS09275 a931593211da7bd4d242569388d133cc 287 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 2 285 27.688 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 PNUC_RS09275 a931593211da7bd4d242569388d133cc 287 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 9 284 3.1E-95 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 PNUC_RS09275 a931593211da7bd4d242569388d133cc 287 Pfam PF01040 UbiA prenyltransferase family 25 269 5.7E-58 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PNUC_RS09275 a931593211da7bd4d242569388d133cc 287 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 64 86 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site PNUC_RS09275 a931593211da7bd4d242569388d133cc 287 PANTHER PTHR11048 2 284 1.5E-73 T 22-04-2016 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 198.824 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 SMART SM00863 654 696 2.3E-18 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 Pfam PF01411 tRNA synthetases class II (A) 5 554 6.5E-220 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 SUPERFAMILY SSF50447 454 553 1.21E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 Pfam PF02272 DHHA1 domain 801 868 7.7E-13 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 696 5.3E-16 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 SUPERFAMILY SSF101353 252 445 5.49E-58 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 8.3E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 283 299 8.3E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 307 320 8.3E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 245 8.3E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 8.3E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 PANTHER PTHR11777 1 874 0.0 T 22-04-2016 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 PANTHER PTHR11777:SF9 1 874 0.0 T 22-04-2016 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 SUPERFAMILY SSF55681 2 251 2.41E-108 T 22-04-2016 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 Gene3D G3DSA:3.30.980.10 563 622 8.8E-4 T 22-04-2016 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 854 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 SUPERFAMILY SSF55186 553 707 1.12E-48 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PNUC_RS08940 6ea63401d1b7a24e457e49925a36550b 874 Gene3D G3DSA:3.30.930.10 1 247 1.9E-124 T 22-04-2016 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 Gene3D G3DSA:2.20.25.90 2 57 5.4E-18 T 22-04-2016 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 Pfam PF00384 Molybdopterin oxidoreductase 66 492 3.2E-84 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 440 457 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 Gene3D G3DSA:3.40.50.740 66 143 6.5E-88 T 22-04-2016 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 Gene3D G3DSA:3.40.50.740 330 580 6.5E-88 T 22-04-2016 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 SUPERFAMILY SSF50692 570 720 1.51E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 Gene3D G3DSA:3.40.228.10 144 329 2.5E-63 T 22-04-2016 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 SMART SM00926 1 59 7.4E-20 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 56 1.4E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 Pfam PF01568 Molydopterin dinucleotide binding domain 597 713 2.5E-25 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 SUPERFAMILY SSF53706 3 599 9.29E-189 T 22-04-2016 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 PANTHER PTHR11615 3 738 1.2E-226 T 22-04-2016 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 Pfam PF04324 BFD-like [2Fe-2S] binding domain 883 935 3.1E-6 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 Gene3D G3DSA:2.40.40.20 588 720 6.4E-40 T 22-04-2016 PNUC_RS05230 338f319ea694d3b6740445334eb88168 946 PANTHER PTHR11615:SF119 3 738 1.2E-226 T 22-04-2016 PNUC_RS05195 1671d6c4f812e3c6613e49bb7680af27 287 PANTHER PTHR24220 9 264 2.3E-118 T 22-04-2016 PNUC_RS05195 1671d6c4f812e3c6613e49bb7680af27 287 SMART SM00382 34 216 1.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS05195 1671d6c4f812e3c6613e49bb7680af27 287 PANTHER PTHR24220:SF361 9 264 2.3E-118 T 22-04-2016 PNUC_RS05195 1671d6c4f812e3c6613e49bb7680af27 287 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 26 254 1.3E-89 T 22-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 PNUC_RS05195 1671d6c4f812e3c6613e49bb7680af27 287 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS05195 1671d6c4f812e3c6613e49bb7680af27 287 Gene3D G3DSA:3.40.50.300 7 215 2.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05195 1671d6c4f812e3c6613e49bb7680af27 287 Pfam PF00005 ABC transporter 26 166 3.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS05195 1671d6c4f812e3c6613e49bb7680af27 287 SUPERFAMILY SSF52540 8 223 2.83E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03265 d944919db23eb2021498c9fce8a2db53 261 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PNUC_RS03265 d944919db23eb2021498c9fce8a2db53 261 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 254 2.3E-75 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PNUC_RS03265 d944919db23eb2021498c9fce8a2db53 261 PANTHER PTHR30589 1 258 7.8E-96 T 22-04-2016 PNUC_RS03265 d944919db23eb2021498c9fce8a2db53 261 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 254 9.7E-76 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PNUC_RS03265 d944919db23eb2021498c9fce8a2db53 261 PANTHER PTHR30589:SF0 1 258 7.8E-96 T 22-04-2016 PNUC_RS03265 d944919db23eb2021498c9fce8a2db53 261 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 261 19.254 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PNUC_RS01455 6bfe784d5e07135ae51a8429548e4271 283 Pfam PF13103 TonB C terminal 196 279 1.7E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 PNUC_RS01455 6bfe784d5e07135ae51a8429548e4271 283 SUPERFAMILY SSF74653 111 120 6.41E-14 T 22-04-2016 PNUC_RS01455 6bfe784d5e07135ae51a8429548e4271 283 SUPERFAMILY SSF74653 184 283 6.41E-14 T 22-04-2016 PNUC_RS01455 6bfe784d5e07135ae51a8429548e4271 283 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 222 281 3.1E-8 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 PNUC_RS01455 6bfe784d5e07135ae51a8429548e4271 283 Gene3D G3DSA:3.30.1150.10 171 283 5.8E-22 T 22-04-2016 PNUC_RS00405 88b0b225e68b10c16d673e23d301092c 62 Gene3D G3DSA:3.30.1390.20 6 61 1.9E-28 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PNUC_RS00405 88b0b225e68b10c16d673e23d301092c 62 SUPERFAMILY SSF55129 7 60 9.55E-19 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PNUC_RS00405 88b0b225e68b10c16d673e23d301092c 62 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 8 61 1.7E-23 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PNUC_RS00405 88b0b225e68b10c16d673e23d301092c 62 PIRSF PIRSF002211 2 62 3.8E-25 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PNUC_RS00405 88b0b225e68b10c16d673e23d301092c 62 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 4 62 19.466 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PNUC_RS00405 88b0b225e68b10c16d673e23d301092c 62 PANTHER PTHR15892 7 60 8.5E-23 T 22-04-2016 PNUC_RS00405 88b0b225e68b10c16d673e23d301092c 62 Pfam PF00327 Ribosomal protein L30p/L7e 11 58 5.6E-17 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PNUC_RS06225 1e21e2a70286ede032fea01a66f71243 392 Gene3D G3DSA:3.90.1300.10 23 386 4.1E-88 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS06225 1e21e2a70286ede032fea01a66f71243 392 ProSitePatterns PS00571 Amidases signature. 112 143 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS06225 1e21e2a70286ede032fea01a66f71243 392 SUPERFAMILY SSF75304 12 386 8.9E-86 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS06225 1e21e2a70286ede032fea01a66f71243 392 PANTHER PTHR11895 27 385 1.2E-89 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS06225 1e21e2a70286ede032fea01a66f71243 392 Pfam PF01425 Amidase 11 215 9.5E-53 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS06225 1e21e2a70286ede032fea01a66f71243 392 Pfam PF01425 Amidase 274 385 8.2E-6 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 PANTHER PTHR30115:SF12 1 112 1.2E-67 T 22-04-2016 PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 Gene3D G3DSA:3.30.70.120 1 112 7.9E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 SMART SM00938 4 105 2.5E-67 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 PIRSF PIRSF039144 1 112 4.9E-55 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 5.3E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 SUPERFAMILY SSF54913 1 112 1.14E-45 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 PRINTS PR00340 P-II protein signature 52 75 2.4E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 PRINTS PR00340 P-II protein signature 83 103 2.4E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 PRINTS PR00340 P-II protein signature 23 41 2.4E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 PRINTS PR00340 P-II protein signature 2 17 2.4E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PNUC_RS03565 60e5f3b98402d184483934897b09f80a 112 PANTHER PTHR30115 1 112 1.2E-67 T 22-04-2016 PNUC_RS00450 27c521bf4569e3ec68a0003ab8d5e1f0 129 Gene3D G3DSA:3.90.1030.10 1 117 2.7E-49 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00450 27c521bf4569e3ec68a0003ab8d5e1f0 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.625 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00450 27c521bf4569e3ec68a0003ab8d5e1f0 129 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-34 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00450 27c521bf4569e3ec68a0003ab8d5e1f0 129 SUPERFAMILY SSF64263 1 119 6.15E-50 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00450 27c521bf4569e3ec68a0003ab8d5e1f0 129 PANTHER PTHR14413 1 119 9.0E-62 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00450 27c521bf4569e3ec68a0003ab8d5e1f0 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00450 27c521bf4569e3ec68a0003ab8d5e1f0 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 3.3E-45 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 SUPERFAMILY SSF51735 6 243 3.55E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 PANTHER PTHR24321:SF6 3 244 4.0E-65 T 22-04-2016 PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 PANTHER PTHR24321 3 244 4.0E-65 T 22-04-2016 PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 9.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 9.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 183 5.5E-5 T 22-04-2016 PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 Gene3D G3DSA:3.40.50.720 3 243 6.9E-96 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.8E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.8E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.8E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.8E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.8E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01145 f1d46e1c4a8e64d555b5247c976da050 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 242 5.7E-73 T 22-04-2016 PNUC_RS09410 c90dc1d8ceec96ec076caa888aa53558 164 PANTHER PTHR23046:SF2 1 160 6.4E-75 T 22-04-2016 PNUC_RS09410 c90dc1d8ceec96ec076caa888aa53558 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 7 160 30.08 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PNUC_RS09410 c90dc1d8ceec96ec076caa888aa53558 164 SUPERFAMILY SSF52255 6 160 1.44E-61 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PNUC_RS09410 c90dc1d8ceec96ec076caa888aa53558 164 Pfam PF00731 AIR carboxylase 7 153 1.2E-59 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PNUC_RS09410 c90dc1d8ceec96ec076caa888aa53558 164 PIRSF PIRSF001338 2 161 5.9E-63 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 PNUC_RS09410 c90dc1d8ceec96ec076caa888aa53558 164 Gene3D G3DSA:3.40.50.7700 2 157 3.4E-69 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PNUC_RS09410 c90dc1d8ceec96ec076caa888aa53558 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 156 6.6E-60 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PNUC_RS09410 c90dc1d8ceec96ec076caa888aa53558 164 SMART SM01001 5 156 6.0E-94 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PNUC_RS09410 c90dc1d8ceec96ec076caa888aa53558 164 PANTHER PTHR23046 1 160 6.4E-75 T 22-04-2016 PNUC_RS02440 12e98a9ba6e33ba5d2bbbd92cf65183d 377 SMART SM00922 149 247 1.0E-25 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PNUC_RS02440 12e98a9ba6e33ba5d2bbbd92cf65183d 377 Gene3D G3DSA:3.30.390.10 3 131 3.0E-34 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PNUC_RS02440 12e98a9ba6e33ba5d2bbbd92cf65183d 377 Pfam PF13378 Enolase C-terminal domain-like 153 362 5.6E-61 T 22-04-2016 IPR029065 Enolase C-terminal domain-like PNUC_RS02440 12e98a9ba6e33ba5d2bbbd92cf65183d 377 Gene3D G3DSA:3.20.20.120 132 368 1.4E-75 T 22-04-2016 IPR029065 Enolase C-terminal domain-like PNUC_RS02440 12e98a9ba6e33ba5d2bbbd92cf65183d 377 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 127 5.5E-16 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PNUC_RS02440 12e98a9ba6e33ba5d2bbbd92cf65183d 377 PANTHER PTHR13794 1 367 2.2E-84 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PNUC_RS02440 12e98a9ba6e33ba5d2bbbd92cf65183d 377 SUPERFAMILY SSF51604 115 368 4.19E-72 T 22-04-2016 IPR029065 Enolase C-terminal domain-like PNUC_RS02440 12e98a9ba6e33ba5d2bbbd92cf65183d 377 SUPERFAMILY SSF54826 4 128 1.23E-25 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PNUC_RS02325 f616a4d8fd71cdab4b8995c16518bc77 552 Pfam PF00135 Carboxylesterase family 21 529 1.8E-102 T 22-04-2016 IPR002018 Carboxylesterase, type B PNUC_RS02325 f616a4d8fd71cdab4b8995c16518bc77 552 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 198 213 - T 22-04-2016 IPR019826 Carboxylesterase type B, active site PNUC_RS02325 f616a4d8fd71cdab4b8995c16518bc77 552 Gene3D G3DSA:3.40.50.1820 476 534 4.0E-128 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS02325 f616a4d8fd71cdab4b8995c16518bc77 552 Gene3D G3DSA:3.40.50.1820 21 427 4.0E-128 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS02325 f616a4d8fd71cdab4b8995c16518bc77 552 SUPERFAMILY SSF53474 476 520 2.34E-112 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS02325 f616a4d8fd71cdab4b8995c16518bc77 552 SUPERFAMILY SSF53474 20 427 2.34E-112 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS02325 f616a4d8fd71cdab4b8995c16518bc77 552 PANTHER PTHR11559 4 427 2.7E-135 T 22-04-2016 PNUC_RS02325 f616a4d8fd71cdab4b8995c16518bc77 552 PANTHER PTHR11559 463 548 2.7E-135 T 22-04-2016 PNUC_RS07955 293243101915f63d330cfaf96bce4117 137 Pfam PF01047 MarR family 30 87 3.0E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PNUC_RS07955 293243101915f63d330cfaf96bce4117 137 SMART SM00347 23 123 4.0E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PNUC_RS07955 293243101915f63d330cfaf96bce4117 137 Gene3D G3DSA:1.10.10.10 8 135 1.2E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS07955 293243101915f63d330cfaf96bce4117 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 2.1E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PNUC_RS07955 293243101915f63d330cfaf96bce4117 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 2.1E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PNUC_RS07955 293243101915f63d330cfaf96bce4117 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 2.1E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PNUC_RS07955 293243101915f63d330cfaf96bce4117 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 2.1E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PNUC_RS07955 293243101915f63d330cfaf96bce4117 137 PANTHER PTHR33164 10 137 2.3E-28 T 22-04-2016 PNUC_RS07955 293243101915f63d330cfaf96bce4117 137 SUPERFAMILY SSF46785 7 135 2.35E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS06625 33c69c4b884927ad47cf0d57444e90f9 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 2.4E-43 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PNUC_RS06625 33c69c4b884927ad47cf0d57444e90f9 90 PANTHER PTHR36965:SF1 2 90 2.0E-42 T 22-04-2016 PNUC_RS06625 33c69c4b884927ad47cf0d57444e90f9 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 4.0E-34 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PNUC_RS06625 33c69c4b884927ad47cf0d57444e90f9 90 PANTHER PTHR36965 2 90 2.0E-42 T 22-04-2016 PNUC_RS06625 33c69c4b884927ad47cf0d57444e90f9 90 PIRSF PIRSF029827 1 90 5.1E-41 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PNUC_RS06625 33c69c4b884927ad47cf0d57444e90f9 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.089 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PNUC_RS06625 33c69c4b884927ad47cf0d57444e90f9 90 Gene3D G3DSA:1.10.3880.10 1 89 1.3E-41 T 22-04-2016 PNUC_RS06625 33c69c4b884927ad47cf0d57444e90f9 90 SUPERFAMILY SSF111148 1 89 8.24E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PNUC_RS00155 da33ed30db8e92e76ed3f9130726ae8b 212 SMART SM00849 12 192 1.4E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS00155 da33ed30db8e92e76ed3f9130726ae8b 212 Gene3D G3DSA:3.60.15.10 5 208 1.4E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS00155 da33ed30db8e92e76ed3f9130726ae8b 212 Pfam PF00753 Metallo-beta-lactamase superfamily 13 192 2.0E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS00155 da33ed30db8e92e76ed3f9130726ae8b 212 SUPERFAMILY SSF56281 3 208 7.73E-55 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS00155 da33ed30db8e92e76ed3f9130726ae8b 212 PANTHER PTHR11935:SF115 1 208 1.3E-105 T 22-04-2016 PNUC_RS00155 da33ed30db8e92e76ed3f9130726ae8b 212 PANTHER PTHR11935 1 208 1.3E-105 T 22-04-2016 PNUC_RS07350 6fb9e18fa92388cff4266e6c9e5f71af 362 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 PNUC_RS07350 6fb9e18fa92388cff4266e6c9e5f71af 362 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 339 9.0E-104 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein PNUC_RS07350 6fb9e18fa92388cff4266e6c9e5f71af 362 Pfam PF01883 Domain of unknown function DUF59 7 76 2.3E-19 T 22-04-2016 IPR002744 Domain of unknown function DUF59 PNUC_RS07350 6fb9e18fa92388cff4266e6c9e5f71af 362 PANTHER PTHR23264 1 361 4.0E-160 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein PNUC_RS07350 6fb9e18fa92388cff4266e6c9e5f71af 362 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 340 38.092 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein PNUC_RS07350 6fb9e18fa92388cff4266e6c9e5f71af 362 SUPERFAMILY SSF52540 88 324 1.58E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07350 6fb9e18fa92388cff4266e6c9e5f71af 362 Gene3D G3DSA:3.40.50.300 93 339 3.5E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07350 6fb9e18fa92388cff4266e6c9e5f71af 362 SUPERFAMILY SSF117916 2 85 1.18E-15 T 22-04-2016 PNUC_RS06775 20c9cd283da22433d29bf7148af730ed 387 PIRSF PIRSF006004 1 363 3.0E-142 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS06775 20c9cd283da22433d29bf7148af730ed 387 PANTHER PTHR30544:SF5 156 377 2.6E-157 T 22-04-2016 PNUC_RS06775 20c9cd283da22433d29bf7148af730ed 387 PANTHER PTHR30544:SF5 1 135 2.6E-157 T 22-04-2016 PNUC_RS06775 20c9cd283da22433d29bf7148af730ed 387 Pfam PF04055 Radical SAM superfamily 94 278 3.0E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PNUC_RS06775 20c9cd283da22433d29bf7148af730ed 387 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 1 350 70.023 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS06775 20c9cd283da22433d29bf7148af730ed 387 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 353 9.9E-123 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS06775 20c9cd283da22433d29bf7148af730ed 387 Gene3D G3DSA:3.20.20.70 90 305 9.4E-11 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS06775 20c9cd283da22433d29bf7148af730ed 387 SUPERFAMILY SSF102114 90 304 5.23E-11 T 22-04-2016 PNUC_RS06775 20c9cd283da22433d29bf7148af730ed 387 PANTHER PTHR30544 156 377 2.6E-157 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS06775 20c9cd283da22433d29bf7148af730ed 387 PANTHER PTHR30544 1 135 2.6E-157 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 7 716 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 Gene3D G3DSA:1.10.420.10 574 694 2.2E-43 T 22-04-2016 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 Gene3D G3DSA:1.10.420.10 305 404 3.2E-46 T 22-04-2016 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 Gene3D G3DSA:1.10.420.10 247 269 3.2E-46 T 22-04-2016 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 PANTHER PTHR30555:SF0 1 717 0.0 T 22-04-2016 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 PANTHER PTHR30555 1 717 0.0 T 22-04-2016 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 SUPERFAMILY SSF48113 427 716 4.57E-107 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 473 499 2.5E-49 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 62 87 2.5E-49 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 47 60 2.5E-49 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 21 43 2.5E-49 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 262 285 2.5E-49 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 Gene3D G3DSA:1.10.520.10 429 573 1.3E-51 T 22-04-2016 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 Gene3D G3DSA:1.10.520.10 697 715 1.3E-51 T 22-04-2016 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 Gene3D G3DSA:1.10.520.10 234 246 2.3E-74 T 22-04-2016 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 Gene3D G3DSA:1.10.520.10 42 196 2.3E-74 T 22-04-2016 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 ProSitePatterns PS00436 Peroxidases active site signature. 85 96 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 Pfam PF00141 Peroxidase 400 693 1.1E-33 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 Pfam PF00141 Peroxidase 72 393 2.3E-51 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 SUPERFAMILY SSF48113 17 426 2.65E-149 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 Hamap MF_01961 Catalase-peroxidase [katG]. 2 717 38.523 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 PRINTS PR00458 Haem peroxidase superfamily signature 163 175 1.6E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 PRINTS PR00458 Haem peroxidase superfamily signature 85 99 1.6E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 PRINTS PR00458 Haem peroxidase superfamily signature 145 162 1.6E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 PRINTS PR00458 Haem peroxidase superfamily signature 313 328 1.6E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PNUC_RS10575 b8429b7870d4e40959fe8475ede551f4 717 PRINTS PR00458 Haem peroxidase superfamily signature 254 269 1.6E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PNUC_RS06415 2ed1aca7c01fa71715ac9d7a8b1fd192 275 PANTHER PTHR21624 13 274 8.1E-77 T 22-04-2016 PNUC_RS06415 2ed1aca7c01fa71715ac9d7a8b1fd192 275 PANTHER PTHR21624:SF1 13 274 8.1E-77 T 22-04-2016 PNUC_RS06415 2ed1aca7c01fa71715ac9d7a8b1fd192 275 Pfam PF04116 Fatty acid hydroxylase superfamily 87 219 7.6E-28 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 PIRSF PIRSF002158 5 276 2.3E-96 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 127 251 1.4E-52 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 44.885 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 PANTHER PTHR13691 1 276 4.9E-134 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 SUPERFAMILY SSF50249 3 126 3.39E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 SMART SM01383 42 119 1.7E-42 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 SMART SM01382 125 253 6.0E-85 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 Gene3D G3DSA:2.30.30.30 119 196 2.9E-30 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 1.6E-122 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 PANTHER PTHR13691:SF5 1 276 4.9E-134 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 Gene3D G3DSA:2.40.50.140 1 115 3.5E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 SUPERFAMILY SSF50104 128 273 7.82E-58 T 22-04-2016 IPR008991 Translation protein SH3-like domain PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 Gene3D G3DSA:4.10.950.10 197 274 4.6E-35 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 PNUC_RS00330 4e35d693a90ac9e45b634b53deaf4ae4 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 4.1E-31 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 SUPERFAMILY SSF52540 53 98 1.05E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 SUPERFAMILY SSF52540 474 597 1.05E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 SUPERFAMILY SSF46600 634 679 2.48E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 Gene3D G3DSA:4.10.860.10 639 680 9.9E-14 T 22-04-2016 IPR001943 UVR domain GO:0005515 PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 SMART SM00487 25 441 2.4E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 Pfam PF04851 Type III restriction enzyme, res subunit 32 155 2.8E-9 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 21 676 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 Gene3D G3DSA:3.40.50.300 404 425 6.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 Gene3D G3DSA:3.40.50.300 294 354 6.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 Gene3D G3DSA:3.40.50.300 24 105 6.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 Gene3D G3DSA:3.30.2060.10 175 246 3.2E-10 T 22-04-2016 PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 PANTHER PTHR24029 15 688 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 Pfam PF02151 UvrB/uvrC motif 645 677 1.4E-5 T 22-04-2016 IPR001943 UVR domain GO:0005515 PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 Pfam PF00271 Helicase conserved C-terminal domain 450 560 6.0E-19 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 Hamap MF_00204 UvrABC system protein B [uvrB]. 19 678 42.404 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 Gene3D G3DSA:3.40.50.300 434 594 2.9E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 SUPERFAMILY SSF52540 20 430 9.0E-132 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 Pfam PF12344 Ultra-violet resistance protein B 567 609 5.0E-21 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain PNUC_RS07815 d22bcca400414f6fd7784e4088ed352f 689 SMART SM00490 475 561 9.2E-20 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS05630 78bbf17fb18bdfc7accde603d1057ea7 212 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 13 190 6.1E-73 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PNUC_RS05630 78bbf17fb18bdfc7accde603d1057ea7 212 Gene3D G3DSA:3.30.63.10 54 93 4.0E-26 T 22-04-2016 PNUC_RS05630 78bbf17fb18bdfc7accde603d1057ea7 212 Gene3D G3DSA:3.40.50.300 26 53 5.1E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05630 78bbf17fb18bdfc7accde603d1057ea7 212 Gene3D G3DSA:3.40.50.300 8 25 3.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05630 78bbf17fb18bdfc7accde603d1057ea7 212 Gene3D G3DSA:3.40.50.300 94 196 3.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05630 78bbf17fb18bdfc7accde603d1057ea7 212 Pfam PF00625 Guanylate kinase 14 190 1.1E-49 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PNUC_RS05630 78bbf17fb18bdfc7accde603d1057ea7 212 SUPERFAMILY SSF52540 10 193 3.12E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05630 78bbf17fb18bdfc7accde603d1057ea7 212 PANTHER PTHR23117 4 195 3.4E-86 T 22-04-2016 PNUC_RS05630 78bbf17fb18bdfc7accde603d1057ea7 212 Hamap MF_00328 Guanylate kinase [gmk]. 10 193 36.043 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PNUC_RS05630 78bbf17fb18bdfc7accde603d1057ea7 212 PANTHER PTHR23117:SF13 4 195 3.4E-86 T 22-04-2016 PNUC_RS05630 78bbf17fb18bdfc7accde603d1057ea7 212 SMART SM00072 11 193 1.6E-60 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PNUC_RS05630 78bbf17fb18bdfc7accde603d1057ea7 212 ProSitePatterns PS00856 Guanylate kinase-like signature. 46 63 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PNUC_RS09830 59313ee469a27ef6c70e14e1202f3cb3 303 Pfam PF04280 Tim44-like domain 180 300 1.6E-14 T 22-04-2016 IPR007379 Tim44-like domain PNUC_RS09830 59313ee469a27ef6c70e14e1202f3cb3 303 PANTHER PTHR41542:SF1 1 302 1.1E-32 T 22-04-2016 PNUC_RS09830 59313ee469a27ef6c70e14e1202f3cb3 303 SUPERFAMILY SSF54427 180 301 6.13E-10 T 22-04-2016 IPR032710 NTF2-like domain PNUC_RS09830 59313ee469a27ef6c70e14e1202f3cb3 303 PANTHER PTHR41542 1 302 1.1E-32 T 22-04-2016 PNUC_RS09830 59313ee469a27ef6c70e14e1202f3cb3 303 SMART SM00978 170 301 2.0E-39 T 22-04-2016 IPR007379 Tim44-like domain PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 Gene3D G3DSA:2.60.40.650 293 404 1.4E-20 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 SUPERFAMILY SSF81296 292 404 9.1E-25 T 22-04-2016 IPR014756 Immunoglobulin E-set PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 289 404 1.9E-8 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 Pfam PF00174 Oxidoreductase molybdopterin binding domain 92 262 2.0E-48 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 PANTHER PTHR19372 55 404 5.7E-72 T 22-04-2016 PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 PRINTS PR00407 Eukaryotic molybdopterin domain signature 373 385 1.8E-11 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 PRINTS PR00407 Eukaryotic molybdopterin domain signature 155 170 1.8E-11 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 PRINTS PR00407 Eukaryotic molybdopterin domain signature 76 92 1.8E-11 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 PRINTS PR00407 Eukaryotic molybdopterin domain signature 208 224 1.8E-11 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 PRINTS PR00407 Eukaryotic molybdopterin domain signature 225 238 1.8E-11 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 PRINTS PR00407 Eukaryotic molybdopterin domain signature 289 301 1.8E-11 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 PRINTS PR00407 Eukaryotic molybdopterin domain signature 328 340 1.8E-11 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 Gene3D G3DSA:3.90.420.10 49 275 4.2E-68 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PNUC_RS07775 2597b96e047e7358dc313fa895eb9ea2 406 SUPERFAMILY SSF56524 54 321 6.54E-70 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PNUC_RS04650 ebd3fd2084d079488f3a7eb89bd9c59e 272 PANTHER PTHR34266 9 272 9.0E-129 T 22-04-2016 PNUC_RS04650 ebd3fd2084d079488f3a7eb89bd9c59e 272 Hamap MF_00443 Thiazole synthase [thiG]. 14 268 40.241 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 PNUC_RS04650 ebd3fd2084d079488f3a7eb89bd9c59e 272 Pfam PF05690 Thiazole biosynthesis protein ThiG 17 262 4.1E-106 T 22-04-2016 PNUC_RS04650 ebd3fd2084d079488f3a7eb89bd9c59e 272 Gene3D G3DSA:3.20.20.70 15 270 8.0E-49 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS04650 ebd3fd2084d079488f3a7eb89bd9c59e 272 SUPERFAMILY SSF110399 13 252 7.98E-80 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 PANTHER PTHR32108:SF0 6 326 1.3E-139 T 22-04-2016 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 Gene3D G3DSA:3.30.1360.10 176 225 1.4E-7 T 22-04-2016 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 SMART SM00662 20 230 3.8E-97 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 SUPERFAMILY SSF56553 50 174 1.7E-42 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 314 3.3E-106 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 SUPERFAMILY SSF47789 249 323 9.55E-27 T 22-04-2016 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 Gene3D G3DSA:2.170.120.12 63 173 4.3E-43 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 2 315 35.091 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 150 6.6E-25 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 SUPERFAMILY SSF55257 175 228 3.93E-29 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 SUPERFAMILY SSF55257 5 50 3.93E-29 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 224 1.6E-22 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 Gene3D G3DSA:3.30.1360.10 6 62 1.1E-10 T 22-04-2016 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 4.0E-33 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 250 306 1.7E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 PANTHER PTHR32108 6 326 1.3E-139 T 22-04-2016 PNUC_RS00445 15a3c6c2136a144785d89c5b8f410c81 326 Gene3D G3DSA:1.10.150.20 247 325 1.7E-35 T 22-04-2016 PNUC_RS00715 73a870fbf99c9f85545bd61dd497b48c 446 Pfam PF00083 Sugar (and other) transporter 19 232 1.4E-30 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PNUC_RS00715 73a870fbf99c9f85545bd61dd497b48c 446 Pfam PF07690 Major Facilitator Superfamily 293 434 1.1E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS00715 73a870fbf99c9f85545bd61dd497b48c 446 SUPERFAMILY SSF103473 17 444 1.23E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS00715 73a870fbf99c9f85545bd61dd497b48c 446 PANTHER PTHR23508 17 446 2.9E-132 T 22-04-2016 PNUC_RS00715 73a870fbf99c9f85545bd61dd497b48c 446 PANTHER PTHR23508:SF7 17 446 2.9E-132 T 22-04-2016 PNUC_RS00715 73a870fbf99c9f85545bd61dd497b48c 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 302 318 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PNUC_RS00715 73a870fbf99c9f85545bd61dd497b48c 446 ProSitePatterns PS00217 Sugar transport proteins signature 2. 129 154 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PNUC_RS00715 73a870fbf99c9f85545bd61dd497b48c 446 Gene3D G3DSA:1.20.1250.20 240 439 2.7E-23 T 22-04-2016 PNUC_RS00715 73a870fbf99c9f85545bd61dd497b48c 446 Gene3D G3DSA:1.20.1250.20 18 218 5.1E-25 T 22-04-2016 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 SUPERFAMILY SSF56053 1 82 1.7E-24 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 PIRSF PIRSF002162 1 177 1.6E-47 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 PANTHER PTHR11655:SF14 1 176 1.3E-83 T 22-04-2016 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 PANTHER PTHR11655 1 176 1.3E-83 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.2E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.2E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.2E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 Gene3D G3DSA:3.90.930.12 2 82 3.0E-28 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.175 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 SUPERFAMILY SSF56053 83 177 1.23E-34 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.3E-72 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 Gene3D G3DSA:3.90.930.12 83 177 3.1E-39 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 Pfam PF00347 Ribosomal protein L6 11 82 3.6E-16 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS00390 f5d8f52f94b35cbaa282eff1ac8d8c52 177 Pfam PF00347 Ribosomal protein L6 90 164 9.8E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PNUC_RS02060 11b312d7e45f567dfab75311dd13ef15 256 SUPERFAMILY SSF53790 5 253 5.63E-53 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PNUC_RS02060 11b312d7e45f567dfab75311dd13ef15 256 PANTHER PTHR21091 44 199 1.1E-17 T 22-04-2016 PNUC_RS02060 11b312d7e45f567dfab75311dd13ef15 256 PANTHER PTHR21091:SF18 44 199 1.1E-17 T 22-04-2016 PNUC_RS02060 11b312d7e45f567dfab75311dd13ef15 256 Gene3D G3DSA:3.30.950.10 136 243 1.5E-23 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PNUC_RS01020 2ded3cd76d344c829e1de15542b84eda 471 PANTHER PTHR11819 3 463 3.7E-90 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PNUC_RS01020 2ded3cd76d344c829e1de15542b84eda 471 PANTHER PTHR11819:SF141 3 463 3.7E-90 T 22-04-2016 PNUC_RS01020 2ded3cd76d344c829e1de15542b84eda 471 Pfam PF00474 Sodium:solute symporter family 32 427 7.0E-34 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PNUC_RS06435 27e0084b4cb486e4cc387cc60c9849f3 302 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 5 299 18.765 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS06435 27e0084b4cb486e4cc387cc60c9849f3 302 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 241 299 1.5E-14 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS06435 27e0084b4cb486e4cc387cc60c9849f3 302 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 27 180 1.3E-56 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 PNUC_RS06435 27e0084b4cb486e4cc387cc60c9849f3 302 SUPERFAMILY SSF55120 5 222 6.72E-77 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS06435 27e0084b4cb486e4cc387cc60c9849f3 302 PANTHER PTHR13767 5 299 4.4E-114 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS06435 27e0084b4cb486e4cc387cc60c9849f3 302 PANTHER PTHR13767:SF2 5 299 4.4E-114 T 22-04-2016 PNUC_RS06435 27e0084b4cb486e4cc387cc60c9849f3 302 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 237 6.7E-13 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal PNUC_RS06435 27e0084b4cb486e4cc387cc60c9849f3 302 SUPERFAMILY SSF88697 240 300 3.78E-5 T 22-04-2016 IPR015947 PUA-like domain PNUC_RS06435 27e0084b4cb486e4cc387cc60c9849f3 302 Gene3D G3DSA:2.30.130.10 240 300 5.4E-8 T 22-04-2016 IPR015947 PUA-like domain PNUC_RS06435 27e0084b4cb486e4cc387cc60c9849f3 302 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 5 218 3.6E-74 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS00440 ee1c9e22dce53c54a0a3928f87d43f19 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 6.3E-30 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 PNUC_RS00440 ee1c9e22dce53c54a0a3928f87d43f19 207 PANTHER PTHR11831:SF4 1 207 1.2E-87 T 22-04-2016 PNUC_RS00440 ee1c9e22dce53c54a0a3928f87d43f19 207 Gene3D G3DSA:3.10.290.10 103 192 1.3E-30 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS00440 ee1c9e22dce53c54a0a3928f87d43f19 207 SMART SM01390 3 96 1.3E-45 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 PNUC_RS00440 ee1c9e22dce53c54a0a3928f87d43f19 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 PNUC_RS00440 ee1c9e22dce53c54a0a3928f87d43f19 207 Pfam PF01479 S4 domain 98 144 1.4E-17 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS00440 ee1c9e22dce53c54a0a3928f87d43f19 207 Gene3D G3DSA:1.10.1050.10 2 102 2.0E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 PNUC_RS00440 ee1c9e22dce53c54a0a3928f87d43f19 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 34.87 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PNUC_RS00440 ee1c9e22dce53c54a0a3928f87d43f19 207 SMART SM00363 97 161 6.0E-15 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS00440 ee1c9e22dce53c54a0a3928f87d43f19 207 SUPERFAMILY SSF55174 3 207 3.53E-65 T 22-04-2016 PNUC_RS00440 ee1c9e22dce53c54a0a3928f87d43f19 207 PANTHER PTHR11831 1 207 1.2E-87 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 PNUC_RS00440 ee1c9e22dce53c54a0a3928f87d43f19 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 8.1E-79 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PNUC_RS07010 8bded987892b5688cc8eecaba7647219 74 SUPERFAMILY SSF50331 6 72 1.45E-20 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PNUC_RS07010 8bded987892b5688cc8eecaba7647219 74 Gene3D G3DSA:2.40.50.100 6 71 5.2E-26 T 22-04-2016 PNUC_RS07010 8bded987892b5688cc8eecaba7647219 74 Pfam PF03459 TOBE domain 8 70 4.6E-19 T 22-04-2016 IPR005116 Transport-associated OB, type 1 PNUC_RS07010 8bded987892b5688cc8eecaba7647219 74 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 5 72 8.1E-23 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 PNUC_RS03175 941fe020b24ff17cca5233b0678acfdd 262 Gene3D G3DSA:3.90.550.10 174 257 1.3E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS03175 941fe020b24ff17cca5233b0678acfdd 262 Gene3D G3DSA:3.90.550.10 2 138 1.3E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS03175 941fe020b24ff17cca5233b0678acfdd 262 Pfam PF00535 Glycosyl transferase family 2 3 123 1.1E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PNUC_RS03175 941fe020b24ff17cca5233b0678acfdd 262 SUPERFAMILY SSF53448 1 122 1.18E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS03175 941fe020b24ff17cca5233b0678acfdd 262 SUPERFAMILY SSF53448 173 253 1.18E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS03175 941fe020b24ff17cca5233b0678acfdd 262 Pfam PF02709 N-terminal domain of galactosyltransferase 172 235 1.1E-11 T 22-04-2016 IPR027791 Galactosyltransferase, C-terminal UniPathway: UPA00378 PNUC_RS03175 941fe020b24ff17cca5233b0678acfdd 262 PANTHER PTHR22916 169 216 4.5E-35 T 22-04-2016 PNUC_RS03175 941fe020b24ff17cca5233b0678acfdd 262 PANTHER PTHR22916 2 139 4.5E-35 T 22-04-2016 PNUC_RS03175 941fe020b24ff17cca5233b0678acfdd 262 PANTHER PTHR22916:SF31 169 216 4.5E-35 T 22-04-2016 PNUC_RS03175 941fe020b24ff17cca5233b0678acfdd 262 PANTHER PTHR22916:SF31 2 139 4.5E-35 T 22-04-2016 PNUC_RS02210 c94c1e7b2962b8160837ade11bc374b9 97 Gene3D G3DSA:2.40.50.140 1 95 7.9E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02210 c94c1e7b2962b8160837ade11bc374b9 97 SUPERFAMILY SSF50249 1 95 1.88E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02210 c94c1e7b2962b8160837ade11bc374b9 97 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 2 95 1.7E-29 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 PNUC_RS02210 c94c1e7b2962b8160837ade11bc374b9 97 PIRSF PIRSF003135 1 97 6.4E-15 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 PNUC_RS02280 55e926a9ffc0dfa12ecf493b19744db1 386 Gene3D G3DSA:3.40.640.10 6 246 3.6E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS02280 55e926a9ffc0dfa12ecf493b19744db1 386 Gene3D G3DSA:3.90.1150.10 249 383 2.0E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS02280 55e926a9ffc0dfa12ecf493b19744db1 386 SUPERFAMILY SSF53383 6 382 1.97E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS02280 55e926a9ffc0dfa12ecf493b19744db1 386 PIRSF PIRSF000390 3 383 1.5E-101 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PNUC_RS02280 55e926a9ffc0dfa12ecf493b19744db1 386 PANTHER PTHR30244 1 383 8.8E-120 T 22-04-2016 PNUC_RS02280 55e926a9ffc0dfa12ecf493b19744db1 386 PANTHER PTHR30244:SF3 1 383 8.8E-120 T 22-04-2016 PNUC_RS02280 55e926a9ffc0dfa12ecf493b19744db1 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 375 1.6E-105 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PNUC_RS03750 7dfbf344b73d5e6c8f7a43b2c3d1aea5 537 PIRSF PIRSF038984 1 537 1.8E-236 T 22-04-2016 IPR028348 FAD dependent protein PNUC_RS03750 7dfbf344b73d5e6c8f7a43b2c3d1aea5 537 SUPERFAMILY SSF51905 482 531 1.19E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03750 7dfbf344b73d5e6c8f7a43b2c3d1aea5 537 SUPERFAMILY SSF51905 104 290 1.19E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03750 7dfbf344b73d5e6c8f7a43b2c3d1aea5 537 PANTHER PTHR10617 75 393 8.3E-161 T 22-04-2016 PNUC_RS03750 7dfbf344b73d5e6c8f7a43b2c3d1aea5 537 PANTHER PTHR10617 473 531 8.3E-161 T 22-04-2016 PNUC_RS03750 7dfbf344b73d5e6c8f7a43b2c3d1aea5 537 Pfam PF03486 HI0933-like protein 104 268 3.9E-6 T 22-04-2016 PNUC_RS03750 7dfbf344b73d5e6c8f7a43b2c3d1aea5 537 PANTHER PTHR10617:SF52 75 393 8.3E-161 T 22-04-2016 PNUC_RS03750 7dfbf344b73d5e6c8f7a43b2c3d1aea5 537 PANTHER PTHR10617:SF52 473 531 8.3E-161 T 22-04-2016 PNUC_RS03750 7dfbf344b73d5e6c8f7a43b2c3d1aea5 537 Gene3D G3DSA:3.50.50.60 473 532 4.5E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03750 7dfbf344b73d5e6c8f7a43b2c3d1aea5 537 Gene3D G3DSA:3.50.50.60 104 292 4.5E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04710 0e27a4b4a3eaa80ba0a7531284ec19fd 151 PANTHER PTHR11803 1 151 2.6E-47 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family PNUC_RS04710 0e27a4b4a3eaa80ba0a7531284ec19fd 151 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 7 151 8.1E-30 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PNUC_RS04710 0e27a4b4a3eaa80ba0a7531284ec19fd 151 PANTHER PTHR11803:SF2 1 151 2.6E-47 T 22-04-2016 PNUC_RS04710 0e27a4b4a3eaa80ba0a7531284ec19fd 151 Gene3D G3DSA:3.30.1330.40 1 151 3.5E-63 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PNUC_RS04710 0e27a4b4a3eaa80ba0a7531284ec19fd 151 SUPERFAMILY SSF55298 1 151 7.38E-53 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PNUC_RS09780 70a8bd76543c07a9f6b4686f96efd962 142 Pfam PF00572 Ribosomal protein L13 14 138 2.2E-52 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PNUC_RS09780 70a8bd76543c07a9f6b4686f96efd962 142 SUPERFAMILY SSF52161 1 139 3.66E-56 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 PNUC_RS09780 70a8bd76543c07a9f6b4686f96efd962 142 PIRSF PIRSF002181 1 142 2.1E-44 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PNUC_RS09780 70a8bd76543c07a9f6b4686f96efd962 142 Gene3D G3DSA:3.90.1180.10 3 141 5.0E-59 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 PNUC_RS09780 70a8bd76543c07a9f6b4686f96efd962 142 PANTHER PTHR11545 1 142 5.2E-64 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PNUC_RS09780 70a8bd76543c07a9f6b4686f96efd962 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 1.3E-58 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 PNUC_RS09780 70a8bd76543c07a9f6b4686f96efd962 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 26.503 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PNUC_RS01015 24697f3b04bb8f641a5b09bfa30087fd 329 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 162 177 - T 22-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 PNUC_RS01015 24697f3b04bb8f641a5b09bfa30087fd 329 PANTHER PTHR11626:SF4 21 296 3.3E-36 T 22-04-2016 PNUC_RS01015 24697f3b04bb8f641a5b09bfa30087fd 329 Pfam PF00494 Squalene/phytoene synthase 25 228 6.7E-30 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 PNUC_RS01015 24697f3b04bb8f641a5b09bfa30087fd 329 SUPERFAMILY SSF48576 15 318 1.04E-41 T 22-04-2016 IPR008949 Isoprenoid synthase domain PNUC_RS01015 24697f3b04bb8f641a5b09bfa30087fd 329 PANTHER PTHR11626 21 296 3.3E-36 T 22-04-2016 PNUC_RS01015 24697f3b04bb8f641a5b09bfa30087fd 329 Gene3D G3DSA:1.10.600.10 12 320 2.7E-49 T 22-04-2016 IPR008949 Isoprenoid synthase domain PNUC_RS10280 3f8266542eb4f395960b8a7cd39e9628 166 Pfam PF01613 Flavin reductase like domain 15 158 8.2E-32 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 PNUC_RS10280 3f8266542eb4f395960b8a7cd39e9628 166 SUPERFAMILY SSF50475 6 158 3.29E-37 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PNUC_RS10280 3f8266542eb4f395960b8a7cd39e9628 166 PANTHER PTHR30466 2 159 2.3E-31 T 22-04-2016 PNUC_RS10280 3f8266542eb4f395960b8a7cd39e9628 166 Gene3D G3DSA:2.30.110.10 2 155 2.3E-44 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PNUC_RS10280 3f8266542eb4f395960b8a7cd39e9628 166 PANTHER PTHR30466:SF1 2 159 2.3E-31 T 22-04-2016 PNUC_RS10280 3f8266542eb4f395960b8a7cd39e9628 166 SMART SM00903 13 157 7.8E-42 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 PNUC_RS06920 436b2d68a243022a7940b069ceb83936 185 PANTHER PTHR21666 39 147 2.4E-20 T 22-04-2016 PNUC_RS06920 436b2d68a243022a7940b069ceb83936 185 Pfam PF01464 Transglycosylase SLT domain 57 161 1.0E-24 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 PNUC_RS06920 436b2d68a243022a7940b069ceb83936 185 Gene3D G3DSA:1.10.530.10 51 178 5.5E-29 T 22-04-2016 PNUC_RS06920 436b2d68a243022a7940b069ceb83936 185 SUPERFAMILY SSF53955 42 178 3.64E-28 T 22-04-2016 IPR023346 Lysozyme-like domain PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 Gene3D G3DSA:3.30.420.40 166 191 1.5E-32 T 22-04-2016 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 Gene3D G3DSA:3.30.420.40 268 322 1.5E-32 T 22-04-2016 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 Gene3D G3DSA:3.30.420.40 10 165 1.5E-44 T 22-04-2016 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 Gene3D G3DSA:3.90.640.10 192 264 2.0E-29 T 22-04-2016 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 1.4E-153 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 SUPERFAMILY SSF53067 155 338 3.2E-48 T 22-04-2016 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 PANTHER PTHR19375:SF117 9 332 5.0E-175 T 22-04-2016 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 Pfam PF06723 MreB/Mbl protein 10 340 2.7E-147 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 SUPERFAMILY SSF53067 9 153 1.54E-36 T 22-04-2016 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 PANTHER PTHR19375 9 332 5.0E-175 T 22-04-2016 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 1.3E-62 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 1.3E-62 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 1.3E-62 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 1.3E-62 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PNUC_RS10455 8942835e12046536b72382c7fbce65e7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 1.3E-62 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PNUC_RS04655 d1c956b339cd9a6f489e360cafff6fca 65 Gene3D G3DSA:3.10.20.30 1 65 2.4E-15 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS04655 d1c956b339cd9a6f489e360cafff6fca 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 6.6E-11 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis PNUC_RS04655 d1c956b339cd9a6f489e360cafff6fca 65 SUPERFAMILY SSF54285 1 65 2.04E-12 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PNUC_RS04655 d1c956b339cd9a6f489e360cafff6fca 65 Pfam PF02597 ThiS family 9 65 1.5E-9 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 PNUC_RS06380 3cb28a8ad3ec025ec2c6c5b8d0948cf9 405 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 3 402 3.0E-143 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase PNUC_RS06380 3cb28a8ad3ec025ec2c6c5b8d0948cf9 405 Gene3D G3DSA:3.40.50.1820 256 386 6.2E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS06380 3cb28a8ad3ec025ec2c6c5b8d0948cf9 405 Gene3D G3DSA:3.40.50.1820 95 217 6.2E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS06380 3cb28a8ad3ec025ec2c6c5b8d0948cf9 405 PIRSF PIRSF020818 1 405 4.2E-159 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase PNUC_RS06380 3cb28a8ad3ec025ec2c6c5b8d0948cf9 405 SUPERFAMILY SSF53474 95 402 3.3E-21 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS06380 3cb28a8ad3ec025ec2c6c5b8d0948cf9 405 Pfam PF06850 PHB de-polymerase C-terminus 203 403 1.7E-81 T 22-04-2016 IPR009656 PHB de-polymerase, C-terminal PNUC_RS03650 6a45848e094b7e166b2cb6a25a40dd4d 218 SUPERFAMILY SSF53098 2 188 1.87E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS03650 6a45848e094b7e166b2cb6a25a40dd4d 218 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 178 207 1.4E-5 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor PNUC_RS03650 6a45848e094b7e166b2cb6a25a40dd4d 218 PANTHER PTHR30231 5 177 2.6E-12 T 22-04-2016 PNUC_RS03650 6a45848e094b7e166b2cb6a25a40dd4d 218 Gene3D G3DSA:3.30.420.10 3 162 7.8E-22 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS03650 6a45848e094b7e166b2cb6a25a40dd4d 218 SMART SM00479 3 162 2.0E-4 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PNUC_RS08275 12b8d7e4b0b9701f92176160204780d7 134 Gene3D G3DSA:1.10.3830.10 13 130 8.2E-41 T 22-04-2016 PNUC_RS08275 12b8d7e4b0b9701f92176160204780d7 134 PANTHER PTHR34299 7 132 4.3E-32 T 22-04-2016 PNUC_RS08275 12b8d7e4b0b9701f92176160204780d7 134 PANTHER PTHR34299:SF1 7 132 4.3E-32 T 22-04-2016 PNUC_RS08275 12b8d7e4b0b9701f92176160204780d7 134 Pfam PF01219 Prokaryotic diacylglycerol kinase 26 126 5.6E-32 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 PNUC_RS08540 653eab0c43f9f9235e6984d29c1177a5 218 PANTHER PTHR13887:SF10 1 216 6.9E-54 T 22-04-2016 PNUC_RS08540 653eab0c43f9f9235e6984d29c1177a5 218 Gene3D G3DSA:3.40.30.10 3 213 2.7E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS08540 653eab0c43f9f9235e6984d29c1177a5 218 SUPERFAMILY SSF52833 4 214 8.51E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS08540 653eab0c43f9f9235e6984d29c1177a5 218 Pfam PF01323 DSBA-like thioredoxin domain 6 211 2.1E-32 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 PNUC_RS08540 653eab0c43f9f9235e6984d29c1177a5 218 PANTHER PTHR13887 1 216 6.9E-54 T 22-04-2016 PNUC_RS00585 ff29b07805c24cdf3fa53fb8972b50d0 208 PANTHER PTHR21403:SF3 3 207 5.5E-85 T 22-04-2016 PNUC_RS00585 ff29b07805c24cdf3fa53fb8972b50d0 208 Pfam PF01634 ATP phosphoribosyltransferase 52 207 8.6E-50 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PNUC_RS00585 ff29b07805c24cdf3fa53fb8972b50d0 208 PANTHER PTHR21403 3 207 5.5E-85 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PNUC_RS00585 ff29b07805c24cdf3fa53fb8972b50d0 208 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 147 168 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PNUC_RS00585 ff29b07805c24cdf3fa53fb8972b50d0 208 SUPERFAMILY SSF53850 3 207 1.03E-66 T 22-04-2016 PNUC_RS00585 ff29b07805c24cdf3fa53fb8972b50d0 208 Gene3D G3DSA:3.40.190.10 2 146 9.5E-42 T 22-04-2016 PNUC_RS00585 ff29b07805c24cdf3fa53fb8972b50d0 208 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 2 208 52.621 T 22-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PNUC_RS00585 ff29b07805c24cdf3fa53fb8972b50d0 208 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 3 188 2.4E-59 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PNUC_RS01010 81193e82b0f7fdc43e867c5bf8fdfa04 170 PANTHER PTHR10815 23 170 3.6E-38 T 22-04-2016 PNUC_RS01010 81193e82b0f7fdc43e867c5bf8fdfa04 170 Gene3D G3DSA:1.10.10.10 84 169 6.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS01010 81193e82b0f7fdc43e867c5bf8fdfa04 170 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 87 169 7.6E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PNUC_RS01010 81193e82b0f7fdc43e867c5bf8fdfa04 170 SUPERFAMILY SSF46767 85 169 1.01E-23 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PNUC_RS01010 81193e82b0f7fdc43e867c5bf8fdfa04 170 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 85 167 6.8E-22 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PNUC_RS01010 81193e82b0f7fdc43e867c5bf8fdfa04 170 SUPERFAMILY SSF53155 14 90 1.96E-8 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 PNUC_RS00535 99853436d21316952b97433af88cc707 282 Pfam PF00005 ABC transporter 37 186 6.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS00535 99853436d21316952b97433af88cc707 282 PANTHER PTHR24220 21 277 1.7E-135 T 22-04-2016 PNUC_RS00535 99853436d21316952b97433af88cc707 282 SUPERFAMILY SSF52540 20 249 6.36E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00535 99853436d21316952b97433af88cc707 282 PANTHER PTHR24220:SF368 21 277 1.7E-135 T 22-04-2016 PNUC_RS00535 99853436d21316952b97433af88cc707 282 Gene3D G3DSA:3.40.50.300 18 258 6.7E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00535 99853436d21316952b97433af88cc707 282 SMART SM00382 46 243 9.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS00535 99853436d21316952b97433af88cc707 282 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 PANTHER PTHR11632:SF27 18 528 1.6E-239 T 22-04-2016 PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 Gene3D G3DSA:1.20.58.100 428 528 1.2E-33 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 Pfam PF00890 FAD binding domain 18 402 7.8E-101 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 PIRSF PIRSF000171 7 544 1.4E-38 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 365 387 1.1E-9 T 22-04-2016 PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 18 37 1.1E-9 T 22-04-2016 PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 PANTHER PTHR11632 18 528 1.6E-239 T 22-04-2016 PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 Gene3D G3DSA:3.90.700.10 254 358 2.7E-39 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 SUPERFAMILY SSF51905 13 265 3.66E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 SUPERFAMILY SSF51905 366 456 3.66E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 16 528 4.9E-188 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 SUPERFAMILY SSF46977 434 530 6.41E-31 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 SUPERFAMILY SSF56425 248 363 7.33E-44 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 Gene3D G3DSA:3.50.50.60 7 253 3.7E-102 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 Gene3D G3DSA:3.50.50.60 359 417 3.7E-102 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05780 827195e9c56d25b211da8137ac59cc56 552 Pfam PF02910 Fumarate reductase flavoprotein C-term 449 528 1.9E-15 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 SUPERFAMILY SSF100934 508 619 2.55E-29 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 SUPERFAMILY SSF53067 19 195 1.27E-50 T 22-04-2016 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 621 42.539 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 Gene3D G3DSA:1.20.1270.10 532 619 1.1E-22 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 PRINTS PR00301 70kDa heat shock protein signature 151 171 7.6E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 PRINTS PR00301 70kDa heat shock protein signature 20 33 7.6E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 PRINTS PR00301 70kDa heat shock protein signature 363 383 7.6E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 PRINTS PR00301 70kDa heat shock protein signature 332 348 7.6E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 PRINTS PR00301 70kDa heat shock protein signature 48 60 7.6E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 PRINTS PR00301 70kDa heat shock protein signature 389 408 7.6E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 PRINTS PR00301 70kDa heat shock protein signature 210 220 7.6E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 PRINTS PR00301 70kDa heat shock protein signature 470 486 7.6E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 619 2.2E-270 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 Gene3D G3DSA:3.30.420.40 317 359 3.0E-32 T 22-04-2016 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 Gene3D G3DSA:3.30.420.40 205 237 3.0E-32 T 22-04-2016 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 Gene3D G3DSA:2.60.34.10 391 531 2.9E-52 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 SUPERFAMILY SSF100920 386 536 9.68E-49 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 Gene3D G3DSA:3.90.640.10 238 312 6.6E-6 T 22-04-2016 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 Gene3D G3DSA:3.30.30.30 74 109 1.5E-5 T 22-04-2016 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 Gene3D G3DSA:3.30.420.40 132 204 1.9E-51 T 22-04-2016 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 Gene3D G3DSA:3.30.420.40 20 73 1.9E-51 T 22-04-2016 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 Pfam PF00012 Hsp70 protein 21 605 2.2E-177 T 22-04-2016 IPR013126 Heat shock protein 70 family PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 PANTHER PTHR19375 19 580 1.6E-260 T 22-04-2016 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 SUPERFAMILY SSF53067 199 380 5.25E-49 T 22-04-2016 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 PANTHER PTHR19375:SF176 19 580 1.6E-260 T 22-04-2016 PNUC_RS07785 a85288a1185aebb88406edad6d33ee4b 621 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site PNUC_RS09980 a2372f193788a273bbba2a78f6284d21 196 PANTHER PTHR18895:SF60 1 130 1.3E-33 T 22-04-2016 PNUC_RS09980 a2372f193788a273bbba2a78f6284d21 196 PANTHER PTHR18895 1 130 1.3E-33 T 22-04-2016 PNUC_RS09980 a2372f193788a273bbba2a78f6284d21 196 PIRSF PIRSF004553 6 193 5.3E-42 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS09980 a2372f193788a273bbba2a78f6284d21 196 SUPERFAMILY SSF53335 7 191 8.51E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS09980 a2372f193788a273bbba2a78f6284d21 196 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 5 187 1.3E-40 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS09980 a2372f193788a273bbba2a78f6284d21 196 Pfam PF03602 Conserved hypothetical protein 95 7 185 8.9E-43 T 22-04-2016 PNUC_RS09980 a2372f193788a273bbba2a78f6284d21 196 Gene3D G3DSA:3.40.50.150 5 192 2.9E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 Gene3D G3DSA:1.10.10.650 4 109 7.5E-45 T 22-04-2016 IPR023319 Tex-like protein, HTH domain PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 SMART SM00732 337 436 1.0E-34 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 PANTHER PTHR10724:SF1 1 769 0.0 T 22-04-2016 PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 Pfam PF12836 Helix-hairpin-helix motif 503 567 2.1E-27 T 22-04-2016 PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 Pfam PF16921 Tex protein YqgF-like domain 338 463 2.5E-50 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 Gene3D G3DSA:1.10.150.310 511 642 6.2E-46 T 22-04-2016 IPR023097 Tex RuvX-like domain PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 Pfam PF00575 S1 RNA binding domain 661 732 2.4E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 Gene3D G3DSA:1.10.3500.10 463 510 5.8E-99 T 22-04-2016 IPR023323 Tex-like domain PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 Gene3D G3DSA:1.10.3500.10 110 333 5.8E-99 T 22-04-2016 IPR023323 Tex-like domain PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 Gene3D G3DSA:2.40.50.140 648 735 6.8E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 SUPERFAMILY SSF53098 333 481 3.57E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 SMART SM00316 661 732 1.2E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 SUPERFAMILY SSF47781 572 644 1.04E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 PANTHER PTHR10724 1 769 0.0 T 22-04-2016 PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 SUPERFAMILY SSF50249 650 738 8.21E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 SUPERFAMILY SSF158832 2 332 1.57E-113 T 22-04-2016 PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 Gene3D G3DSA:3.30.420.140 338 462 4.8E-49 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 SUPERFAMILY SSF47781 482 569 1.45E-26 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PNUC_RS06420 7b14dbc7f6f8b816b58aaf02b77c02ff 784 Pfam PF09371 Tex-like protein N-terminal domain 10 201 1.1E-68 T 22-04-2016 IPR018974 Tex-like protein, N-terminal PNUC_RS08345 79344fb1f3291d1c10467107a878b4b3 328 PANTHER PTHR30425 19 327 7.0E-143 T 22-04-2016 PNUC_RS08345 79344fb1f3291d1c10467107a878b4b3 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 316 3.5E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS08345 79344fb1f3291d1c10467107a878b4b3 328 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 28 318 1.0E-88 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 PNUC_RS08345 79344fb1f3291d1c10467107a878b4b3 328 Gene3D G3DSA:1.10.3720.10 36 324 9.1E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS08345 79344fb1f3291d1c10467107a878b4b3 328 PANTHER PTHR30425:SF1 19 327 7.0E-143 T 22-04-2016 PNUC_RS08345 79344fb1f3291d1c10467107a878b4b3 328 SUPERFAMILY SSF161098 34 313 4.32E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS05545 ccf192d40c95a742a216cdfac9beb705 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 8.1E-63 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS05545 ccf192d40c95a742a216cdfac9beb705 163 SUPERFAMILY SSF55021 1 76 2.8E-22 T 22-04-2016 PNUC_RS05545 ccf192d40c95a742a216cdfac9beb705 163 Gene3D G3DSA:3.30.70.260 1 78 3.5E-35 T 22-04-2016 PNUC_RS05545 ccf192d40c95a742a216cdfac9beb705 163 SUPERFAMILY SSF55021 79 162 8.24E-25 T 22-04-2016 PNUC_RS05545 ccf192d40c95a742a216cdfac9beb705 163 PANTHER PTHR30239 1 161 1.1E-82 T 22-04-2016 PNUC_RS05545 ccf192d40c95a742a216cdfac9beb705 163 Gene3D G3DSA:3.30.70.1150 83 162 6.9E-28 T 22-04-2016 PNUC_RS05545 ccf192d40c95a742a216cdfac9beb705 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 4.3E-25 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS05545 ccf192d40c95a742a216cdfac9beb705 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 8.0E-34 T 22-04-2016 PNUC_RS05545 ccf192d40c95a742a216cdfac9beb705 163 Pfam PF13710 ACT domain 12 73 5.5E-14 T 22-04-2016 PNUC_RS04735 a3b8133748544d278c5b38669f7eb668 212 SUPERFAMILY SSF46785 2 76 1.73E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS04735 a3b8133748544d278c5b38669f7eb668 212 SMART SM00895 82 206 3.3E-21 T 22-04-2016 IPR011711 GntR, C-terminal PNUC_RS04735 a3b8133748544d278c5b38669f7eb668 212 SMART SM00345 14 72 5.4E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS04735 a3b8133748544d278c5b38669f7eb668 212 PANTHER PTHR11751 9 98 5.2E-30 T 22-04-2016 PNUC_RS04735 a3b8133748544d278c5b38669f7eb668 212 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.5E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS04735 a3b8133748544d278c5b38669f7eb668 212 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.5E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS04735 a3b8133748544d278c5b38669f7eb668 212 Pfam PF07729 FCD domain 82 206 2.9E-28 T 22-04-2016 IPR011711 GntR, C-terminal PNUC_RS04735 a3b8133748544d278c5b38669f7eb668 212 PANTHER PTHR11751:SF362 9 98 5.2E-30 T 22-04-2016 PNUC_RS04735 a3b8133748544d278c5b38669f7eb668 212 Gene3D G3DSA:1.20.120.530 77 211 1.5E-30 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PNUC_RS04735 a3b8133748544d278c5b38669f7eb668 212 SUPERFAMILY SSF48008 78 210 8.89E-28 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PNUC_RS04735 a3b8133748544d278c5b38669f7eb668 212 Gene3D G3DSA:1.10.10.10 3 73 2.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS04735 a3b8133748544d278c5b38669f7eb668 212 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 1.2E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 Gene3D G3DSA:3.30.930.10 417 594 1.6E-112 T 22-04-2016 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 Gene3D G3DSA:3.30.930.10 134 279 1.6E-112 T 22-04-2016 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 PANTHER PTHR22594 374 580 7.5E-245 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 PANTHER PTHR22594 1 300 7.5E-245 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 Pfam PF01336 OB-fold nucleic acid binding domain 20 98 3.1E-16 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 Pfam PF02938 GAD domain 311 409 1.1E-28 T 22-04-2016 IPR029351 GAD domain PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 Gene3D G3DSA:3.30.1360.30 280 416 1.3E-43 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 Gene3D G3DSA:2.40.50.140 3 108 2.5E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 591 5.1E-243 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 SUPERFAMILY SSF55261 294 419 1.19E-42 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 SUPERFAMILY SSF50249 3 107 4.38E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 SUPERFAMILY SSF55681 112 295 5.17E-106 T 22-04-2016 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 SUPERFAMILY SSF55681 433 593 5.17E-106 T 22-04-2016 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 PANTHER PTHR22594:SF5 374 580 7.5E-245 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 PANTHER PTHR22594:SF5 1 300 7.5E-245 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 3 572 35.781 T 22-04-2016 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 527 541 8.4E-27 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 8.4E-27 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 8.4E-27 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 483 499 8.4E-27 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09810 417f36b5340160b92e6eb014f6b19be1 599 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 567 1.1E-108 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 2.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 2.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 391 2.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 2.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 SUPERFAMILY SSF55874 273 431 8.64E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 Pfam PF00512 His Kinase A (phospho-acceptor) domain 218 283 1.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 SMART SM00388 218 283 9.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 SUPERFAMILY SSF52172 466 584 4.98E-16 T 22-04-2016 IPR011006 CheY-like superfamily PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 Gene3D G3DSA:3.30.565.10 289 433 1.2E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 PANTHER PTHR24423 14 24 1.0E-69 T 22-04-2016 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 PANTHER PTHR24423 216 588 1.0E-69 T 22-04-2016 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 Gene3D G3DSA:1.10.287.130 218 279 4.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 Gene3D G3DSA:3.40.50.2300 463 584 6.7E-15 T 22-04-2016 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 432 8.0E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 PANTHER PTHR24423:SF479 14 24 1.0E-69 T 22-04-2016 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 PANTHER PTHR24423:SF479 216 588 1.0E-69 T 22-04-2016 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 SMART SM00387 327 437 5.4E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 SMART SM00448 466 579 1.0E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 Pfam PF00072 Response regulator receiver domain 468 580 7.7E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS02945 1a3ecb005a945c4e915283ff5d9fde27 591 SUPERFAMILY SSF47384 203 283 5.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS02470 9592ed077f820a4e5bd4ba82e8ede4ed 401 PANTHER PTHR23513 4 388 6.2E-100 T 22-04-2016 PNUC_RS02470 9592ed077f820a4e5bd4ba82e8ede4ed 401 Pfam PF05977 Transmembrane secretion effector 5 388 3.5E-38 T 22-04-2016 IPR010290 Transmembrane secretion effector PNUC_RS02470 9592ed077f820a4e5bd4ba82e8ede4ed 401 Gene3D G3DSA:1.20.1250.20 24 185 2.5E-13 T 22-04-2016 PNUC_RS02470 9592ed077f820a4e5bd4ba82e8ede4ed 401 Gene3D G3DSA:1.20.1250.20 211 394 3.2E-10 T 22-04-2016 PNUC_RS02470 9592ed077f820a4e5bd4ba82e8ede4ed 401 PANTHER PTHR23513:SF9 4 388 6.2E-100 T 22-04-2016 PNUC_RS02470 9592ed077f820a4e5bd4ba82e8ede4ed 401 SUPERFAMILY SSF103473 5 400 1.02E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS05700 de5860716c60f624399b1fec5342397a 378 Gene3D G3DSA:3.50.50.60 151 223 2.1E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05700 de5860716c60f624399b1fec5342397a 378 Gene3D G3DSA:3.50.50.60 332 371 2.1E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05700 de5860716c60f624399b1fec5342397a 378 Gene3D G3DSA:3.50.50.60 3 84 2.1E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05700 de5860716c60f624399b1fec5342397a 378 SUPERFAMILY SSF51905 333 374 9.06E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05700 de5860716c60f624399b1fec5342397a 378 SUPERFAMILY SSF51905 4 228 9.06E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05700 de5860716c60f624399b1fec5342397a 378 PANTHER PTHR13847:SF207 1 370 2.2E-160 T 22-04-2016 PNUC_RS05700 de5860716c60f624399b1fec5342397a 378 Pfam PF01266 FAD dependent oxidoreductase 5 370 6.2E-56 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PNUC_RS05700 de5860716c60f624399b1fec5342397a 378 Gene3D G3DSA:3.30.9.10 88 150 2.8E-4 T 22-04-2016 PNUC_RS05700 de5860716c60f624399b1fec5342397a 378 PANTHER PTHR13847 1 370 2.2E-160 T 22-04-2016 PNUC_RS07945 b43d9bfcbde34aee3431e5b6d17023f9 182 PANTHER PTHR30529 1 179 8.8E-57 T 22-04-2016 PNUC_RS07945 b43d9bfcbde34aee3431e5b6d17023f9 182 Pfam PF01292 Prokaryotic cytochrome b561 5 173 1.4E-30 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PNUC_RS07945 b43d9bfcbde34aee3431e5b6d17023f9 182 SUPERFAMILY SSF81342 3 175 7.06E-38 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PNUC_RS05770 840924e56c8ea1bc32e03ad9489c74cf 285 SUPERFAMILY SSF51690 114 283 3.61E-49 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 PNUC_RS05770 840924e56c8ea1bc32e03ad9489c74cf 285 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 282 2.0E-46 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 PNUC_RS05770 840924e56c8ea1bc32e03ad9489c74cf 285 PIRSF PIRSF006250 6 285 4.5E-81 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD PNUC_RS05770 840924e56c8ea1bc32e03ad9489c74cf 285 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 16 283 5.6E-79 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 PNUC_RS05770 840924e56c8ea1bc32e03ad9489c74cf 285 Gene3D G3DSA:3.90.1170.20 8 138 2.9E-37 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 PNUC_RS05770 840924e56c8ea1bc32e03ad9489c74cf 285 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 24 111 3.8E-21 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 PNUC_RS05770 840924e56c8ea1bc32e03ad9489c74cf 285 SUPERFAMILY SSF54675 6 111 1.12E-24 T 22-04-2016 PNUC_RS05770 840924e56c8ea1bc32e03ad9489c74cf 285 Gene3D G3DSA:3.20.20.70 139 272 4.4E-51 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS05770 840924e56c8ea1bc32e03ad9489c74cf 285 PANTHER PTHR32179 13 285 7.3E-94 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 SUPERFAMILY SSF82693 138 183 1.74E-22 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 SUPERFAMILY SSF82693 276 332 1.74E-22 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 SUPERFAMILY SSF82714 723 807 6.15E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 Gene3D G3DSA:3.30.70.1430 39 140 2.3E-30 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 SUPERFAMILY SSF82693 672 722 8.37E-21 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 SUPERFAMILY SSF82693 809 858 8.37E-21 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 SUPERFAMILY SSF82866 832 1025 2.62E-42 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 SUPERFAMILY SSF82693 565 671 2.46E-22 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 PANTHER PTHR32063 1 1042 0.0 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 6.75E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 6.75E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 6.75E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 6.75E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 6.75E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 6.75E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 6.75E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 6.75E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 6.75E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 Pfam PF00873 AcrB/AcrD/AcrF family 3 1027 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 PANTHER PTHR32063:SF27 1 1042 0.0 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 SUPERFAMILY SSF82714 184 274 1.83E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1039 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 Gene3D G3DSA:3.30.2090.10 723 811 4.8E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 Gene3D G3DSA:3.30.2090.10 183 277 6.2E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 SUPERFAMILY SSF82693 39 130 5.23E-25 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 Gene3D G3DSA:3.30.70.1430 567 671 3.1E-22 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 SUPERFAMILY SSF82866 298 496 2.62E-43 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 Gene3D G3DSA:1.10.3850.10 816 1025 2.9E-52 T 22-04-2016 PNUC_RS04525 c02b557f08f4c0781d386b34632e5076 1042 Gene3D G3DSA:1.10.3850.10 284 499 1.6E-51 T 22-04-2016 PNUC_RS01590 67667890b4636e9b241df424e1d38138 376 Gene3D G3DSA:3.40.50.720 7 206 1.2E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01590 67667890b4636e9b241df424e1d38138 376 PANTHER PTHR10366:SF32 313 376 7.9E-209 T 22-04-2016 PNUC_RS01590 67667890b4636e9b241df424e1d38138 376 PANTHER PTHR10366:SF32 7 285 7.9E-209 T 22-04-2016 PNUC_RS01590 67667890b4636e9b241df424e1d38138 376 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 6 356 1.5E-176 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 PNUC_RS01590 67667890b4636e9b241df424e1d38138 376 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 6 359 55.102 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 PNUC_RS01590 67667890b4636e9b241df424e1d38138 376 PANTHER PTHR10366 313 376 7.9E-209 T 22-04-2016 PNUC_RS01590 67667890b4636e9b241df424e1d38138 376 PANTHER PTHR10366 7 285 7.9E-209 T 22-04-2016 PNUC_RS01590 67667890b4636e9b241df424e1d38138 376 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 349 1.8E-154 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01590 67667890b4636e9b241df424e1d38138 376 Gene3D G3DSA:3.90.25.10 307 364 2.8E-49 T 22-04-2016 PNUC_RS01590 67667890b4636e9b241df424e1d38138 376 Gene3D G3DSA:3.90.25.10 207 250 2.8E-49 T 22-04-2016 PNUC_RS01590 67667890b4636e9b241df424e1d38138 376 SUPERFAMILY SSF51735 6 355 1.65E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS00105 7395535e9021fbcaa189fc6fd34280fb 88 SUPERFAMILY SSF81333 7 82 1.83E-17 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PNUC_RS00105 7395535e9021fbcaa189fc6fd34280fb 88 Pfam PF00137 ATP synthase subunit C 14 76 1.0E-9 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PNUC_RS00105 7395535e9021fbcaa189fc6fd34280fb 88 Gene3D G3DSA:1.20.20.10 7 82 2.8E-33 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 PNUC_RS00105 7395535e9021fbcaa189fc6fd34280fb 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 80 2.9E-20 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PNUC_RS00105 7395535e9021fbcaa189fc6fd34280fb 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 80 13.303 T 22-04-2016 PNUC_RS00105 7395535e9021fbcaa189fc6fd34280fb 88 ProSitePatterns PS00605 ATP synthase c subunit signature. 43 64 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site PNUC_RS08505 be1dfbd600247472c6dfefff4cfd13c5 299 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 164 2.8E-39 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PNUC_RS08505 be1dfbd600247472c6dfefff4cfd13c5 299 Gene3D G3DSA:3.40.50.720 7 167 5.6E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08505 be1dfbd600247472c6dfefff4cfd13c5 299 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 289 2.0E-36 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PNUC_RS08505 be1dfbd600247472c6dfefff4cfd13c5 299 PIRSF PIRSF000103 2 293 8.1E-65 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PNUC_RS08505 be1dfbd600247472c6dfefff4cfd13c5 299 SUPERFAMILY SSF48179 169 291 9.86E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS08505 be1dfbd600247472c6dfefff4cfd13c5 299 PANTHER PTHR22981:SF27 7 290 1.5E-129 T 22-04-2016 PNUC_RS08505 be1dfbd600247472c6dfefff4cfd13c5 299 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 10 23 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 PNUC_RS08505 be1dfbd600247472c6dfefff4cfd13c5 299 Gene3D G3DSA:1.10.1040.10 169 290 2.0E-46 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PNUC_RS08505 be1dfbd600247472c6dfefff4cfd13c5 299 PANTHER PTHR22981 7 290 1.5E-129 T 22-04-2016 PNUC_RS08505 be1dfbd600247472c6dfefff4cfd13c5 299 SUPERFAMILY SSF51735 8 167 1.36E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS05125 0a35313663a7ed8563b94720b9d8a550 472 SUPERFAMILY SSF55103 191 470 5.4E-54 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PNUC_RS05125 0a35313663a7ed8563b94720b9d8a550 472 Gene3D G3DSA:3.30.465.10 98 218 1.5E-37 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PNUC_RS05125 0a35313663a7ed8563b94720b9d8a550 472 SUPERFAMILY SSF56176 3 218 1.11E-75 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PNUC_RS05125 0a35313663a7ed8563b94720b9d8a550 472 Gene3D G3DSA:1.10.45.10 430 469 6.6E-13 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PNUC_RS05125 0a35313663a7ed8563b94720b9d8a550 472 PANTHER PTHR11748:SF76 1 472 5.2E-178 T 22-04-2016 PNUC_RS05125 0a35313663a7ed8563b94720b9d8a550 472 Pfam PF01565 FAD binding domain 42 178 3.2E-35 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PNUC_RS05125 0a35313663a7ed8563b94720b9d8a550 472 PANTHER PTHR11748 1 472 5.2E-178 T 22-04-2016 PNUC_RS05125 0a35313663a7ed8563b94720b9d8a550 472 Gene3D G3DSA:3.30.43.10 3 96 6.9E-25 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PNUC_RS05125 0a35313663a7ed8563b94720b9d8a550 472 Pfam PF02913 FAD linked oxidases, C-terminal domain 223 469 2.1E-48 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PNUC_RS10380 21f54fe094d9d2985f481d2948b837a5 284 Gene3D G3DSA:3.10.310.10 115 259 9.5E-45 T 22-04-2016 PNUC_RS10380 21f54fe094d9d2985f481d2948b837a5 284 PANTHER PTHR31689:SF0 1 284 9.2E-106 T 22-04-2016 PNUC_RS10380 21f54fe094d9d2985f481d2948b837a5 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 284 33.745 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS10380 21f54fe094d9d2985f481d2948b837a5 284 Gene3D G3DSA:3.10.310.10 1 114 3.9E-48 T 22-04-2016 PNUC_RS10380 21f54fe094d9d2985f481d2948b837a5 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 282 8.1E-82 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS10380 21f54fe094d9d2985f481d2948b837a5 284 PANTHER PTHR31689 1 284 9.2E-106 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS10380 21f54fe094d9d2985f481d2948b837a5 284 SUPERFAMILY SSF54506 1 283 3.0E-46 T 22-04-2016 PNUC_RS10380 21f54fe094d9d2985f481d2948b837a5 284 Pfam PF01678 Diaminopimelate epimerase 159 276 1.9E-26 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS10380 21f54fe094d9d2985f481d2948b837a5 284 Pfam PF01678 Diaminopimelate epimerase 1 117 2.6E-29 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS10380 21f54fe094d9d2985f481d2948b837a5 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 60 74 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS01355 3482f6fc5a0a3c135a9088e28885a1a4 182 Gene3D G3DSA:2.60.120.10 2 179 1.3E-79 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS01355 3482f6fc5a0a3c135a9088e28885a1a4 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 173 1.8E-71 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PNUC_RS01355 3482f6fc5a0a3c135a9088e28885a1a4 182 SUPERFAMILY SSF51182 1 179 6.85E-75 T 22-04-2016 IPR011051 RmlC-like cupin domain PNUC_RS01355 3482f6fc5a0a3c135a9088e28885a1a4 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 173 5.0E-65 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PNUC_RS01355 3482f6fc5a0a3c135a9088e28885a1a4 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 177 9.3E-76 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PNUC_RS01355 3482f6fc5a0a3c135a9088e28885a1a4 182 PANTHER PTHR21047 6 160 5.6E-69 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PNUC_RS09850 d8b75687cfb7c5d9a29c86113715b36a 506 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 309 4.6E-75 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PNUC_RS09850 d8b75687cfb7c5d9a29c86113715b36a 506 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PNUC_RS09850 d8b75687cfb7c5d9a29c86113715b36a 506 SUPERFAMILY SSF53686 4 359 1.23E-96 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PNUC_RS09850 d8b75687cfb7c5d9a29c86113715b36a 506 Gene3D G3DSA:3.40.50.1100 50 149 7.2E-32 T 22-04-2016 PNUC_RS09850 d8b75687cfb7c5d9a29c86113715b36a 506 Gene3D G3DSA:3.40.1020.10 385 505 7.7E-47 T 22-04-2016 PNUC_RS09850 d8b75687cfb7c5d9a29c86113715b36a 506 Gene3D G3DSA:3.40.1020.10 215 384 6.2E-50 T 22-04-2016 PNUC_RS09850 d8b75687cfb7c5d9a29c86113715b36a 506 PANTHER PTHR10314 1 361 7.1E-197 T 22-04-2016 PNUC_RS09850 d8b75687cfb7c5d9a29c86113715b36a 506 PANTHER PTHR10314:SF30 1 361 7.1E-197 T 22-04-2016 PNUC_RS09850 d8b75687cfb7c5d9a29c86113715b36a 506 SUPERFAMILY SSF55021 412 505 1.14E-28 T 22-04-2016 PNUC_RS09850 d8b75687cfb7c5d9a29c86113715b36a 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 322 411 8.6E-25 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PNUC_RS09850 d8b75687cfb7c5d9a29c86113715b36a 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 421 505 4.3E-24 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PNUC_RS09850 d8b75687cfb7c5d9a29c86113715b36a 506 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 505 3.6E-241 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PNUC_RS06940 0bd91d22da1c2f2aaabd8166829bf248 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 329 2.8E-84 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS06940 0bd91d22da1c2f2aaabd8166829bf248 333 PIRSF PIRSF017082 1 332 5.0E-76 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS06940 0bd91d22da1c2f2aaabd8166829bf248 333 PANTHER PTHR30349:SF16 12 330 5.2E-95 T 22-04-2016 PNUC_RS06940 0bd91d22da1c2f2aaabd8166829bf248 333 SUPERFAMILY SSF53850 98 293 2.9E-10 T 22-04-2016 PNUC_RS06940 0bd91d22da1c2f2aaabd8166829bf248 333 PANTHER PTHR30349 12 330 5.2E-95 T 22-04-2016 PNUC_RS00600 00d028b4fae0ea403b57244912423294 195 SUPERFAMILY SSF54211 1 85 2.78E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS00600 00d028b4fae0ea403b57244912423294 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 174 1.1E-62 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PNUC_RS00600 00d028b4fae0ea403b57244912423294 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PNUC_RS00600 00d028b4fae0ea403b57244912423294 195 PANTHER PTHR23133:SF2 1 195 1.9E-102 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PNUC_RS00600 00d028b4fae0ea403b57244912423294 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.642 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PNUC_RS00600 00d028b4fae0ea403b57244912423294 195 Gene3D G3DSA:3.30.230.40 90 195 2.0E-30 T 22-04-2016 PNUC_RS00600 00d028b4fae0ea403b57244912423294 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PNUC_RS00600 00d028b4fae0ea403b57244912423294 195 Gene3D G3DSA:3.30.230.40 1 88 3.7E-38 T 22-04-2016 PNUC_RS00600 00d028b4fae0ea403b57244912423294 195 SUPERFAMILY SSF54211 88 178 1.39E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS00600 00d028b4fae0ea403b57244912423294 195 PANTHER PTHR23133 1 195 1.9E-102 T 22-04-2016 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 Pfam PF00375 Sodium:dicarboxylate symporter family 14 406 3.8E-110 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 Gene3D G3DSA:1.10.3860.10 12 412 8.3E-114 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 7 434 37.895 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 PANTHER PTHR11958:SF49 10 442 5.6E-247 T 22-04-2016 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 300 323 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 SUPERFAMILY SSF118215 14 406 2.35E-117 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 PANTHER PTHR11958 10 442 5.6E-247 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 PRINTS PR00173 Glutamate-aspartate symporter signature 150 172 2.7E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 PRINTS PR00173 Glutamate-aspartate symporter signature 79 104 2.7E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 PRINTS PR00173 Glutamate-aspartate symporter signature 197 216 2.7E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 2.7E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 PRINTS PR00173 Glutamate-aspartate symporter signature 12 32 2.7E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS10520 dbbf97cc9ee12b2514c0dbd6d03b3e55 442 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 2.7E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PNUC_RS04345 b37c124e1369a4379f4c2b48530b78bd 107 Pfam PF00216 Bacterial DNA-binding protein 10 98 4.4E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS04345 b37c124e1369a4379f4c2b48530b78bd 107 SMART SM00411 10 99 4.4E-37 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS04345 b37c124e1369a4379f4c2b48530b78bd 107 PRINTS PR01727 Prokaryotic integration host factor signature 49 64 4.0E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS04345 b37c124e1369a4379f4c2b48530b78bd 107 PRINTS PR01727 Prokaryotic integration host factor signature 67 80 4.0E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS04345 b37c124e1369a4379f4c2b48530b78bd 107 PRINTS PR01727 Prokaryotic integration host factor signature 83 97 4.0E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS04345 b37c124e1369a4379f4c2b48530b78bd 107 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 8 104 27.735 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 PNUC_RS04345 b37c124e1369a4379f4c2b48530b78bd 107 Gene3D G3DSA:4.10.520.10 9 100 1.8E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PNUC_RS04345 b37c124e1369a4379f4c2b48530b78bd 107 PANTHER PTHR33175 10 105 4.0E-43 T 22-04-2016 PNUC_RS04345 b37c124e1369a4379f4c2b48530b78bd 107 PANTHER PTHR33175:SF2 10 105 4.0E-43 T 22-04-2016 PNUC_RS04345 b37c124e1369a4379f4c2b48530b78bd 107 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 9 102 9.1E-39 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 PNUC_RS04345 b37c124e1369a4379f4c2b48530b78bd 107 SUPERFAMILY SSF47729 10 101 2.65E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PNUC_RS04345 b37c124e1369a4379f4c2b48530b78bd 107 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 55 74 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PNUC_RS09010 dad35a569ca11b12a75a05f217f70cdd 230 PANTHER PTHR30471 1 226 4.2E-95 T 22-04-2016 PNUC_RS09010 dad35a569ca11b12a75a05f217f70cdd 230 Gene3D G3DSA:1.10.150.20 49 85 4.3E-4 T 22-04-2016 PNUC_RS09010 dad35a569ca11b12a75a05f217f70cdd 230 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 225 2.5E-68 T 22-04-2016 IPR001405 RadC protein PNUC_RS09010 dad35a569ca11b12a75a05f217f70cdd 230 Pfam PF04002 RadC-like JAB domain 105 224 1.2E-41 T 22-04-2016 IPR025657 RadC-like JAB domain PNUC_RS09010 dad35a569ca11b12a75a05f217f70cdd 230 Gene3D G3DSA:3.40.140.10 103 226 3.3E-45 T 22-04-2016 PNUC_RS09010 dad35a569ca11b12a75a05f217f70cdd 230 PANTHER PTHR30471:SF5 1 226 4.2E-95 T 22-04-2016 PNUC_RS09010 dad35a569ca11b12a75a05f217f70cdd 230 SUPERFAMILY SSF102712 153 192 1.7E-5 T 22-04-2016 PNUC_RS09010 dad35a569ca11b12a75a05f217f70cdd 230 SUPERFAMILY SSF47781 18 89 1.15E-10 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PNUC_RS09010 dad35a569ca11b12a75a05f217f70cdd 230 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 175 180 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 SUPERFAMILY SSF48452 6 168 1.9E-35 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 Pfam PF14559 Tetratricopeptide repeat 8 69 8.4E-8 T 22-04-2016 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 SUPERFAMILY SSF48452 97 268 1.19E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 SUPERFAMILY SSF48452 359 449 1.19E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 PANTHER PTHR23083 9 182 1.9E-33 T 22-04-2016 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 Gene3D G3DSA:1.25.40.10 8 97 4.6E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 Gene3D G3DSA:1.25.40.10 98 169 2.2E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 Pfam PF13432 Tetratricopeptide repeat 107 167 1.4E-4 T 22-04-2016 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 Pfam PF13844 Glycosyl transferase family 41 412 604 5.1E-54 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 Pfam PF13844 Glycosyl transferase family 41 251 406 3.1E-36 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 SMART SM00028 134 167 0.0019 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 SMART SM00028 66 99 0.43 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 SMART SM00028 32 65 3.9E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS02555 21540e1bcae05aa61c7618c1d870f276 618 SMART SM00028 100 133 0.0099 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS04370 5c1784747b01bde61a7c52e49e64b137 231 SUPERFAMILY SSF52172 89 152 8.5E-5 T 22-04-2016 IPR011006 CheY-like superfamily PNUC_RS04370 5c1784747b01bde61a7c52e49e64b137 231 Pfam PF12728 Helix-turn-helix domain 10 60 9.2E-9 T 22-04-2016 PNUC_RS04370 5c1784747b01bde61a7c52e49e64b137 231 Gene3D G3DSA:3.40.50.2300 83 152 8.0E-5 T 22-04-2016 PNUC_RS04370 5c1784747b01bde61a7c52e49e64b137 231 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 10 55 1.4E-9 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 PNUC_RS07630 edd0acf2f83944c4947c47730f416dab 383 PANTHER PTHR11014 5 383 9.4E-79 T 22-04-2016 PNUC_RS07630 edd0acf2f83944c4947c47730f416dab 383 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 381 5.3E-154 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 PNUC_RS07630 edd0acf2f83944c4947c47730f416dab 383 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 383 49.97 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 PNUC_RS07630 edd0acf2f83944c4947c47730f416dab 383 Pfam PF01546 Peptidase family M20/M25/M40 70 379 9.0E-41 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PNUC_RS07630 edd0acf2f83944c4947c47730f416dab 383 Gene3D G3DSA:3.30.70.360 196 294 1.7E-34 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PNUC_RS07630 edd0acf2f83944c4947c47730f416dab 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 69 78 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PNUC_RS07630 edd0acf2f83944c4947c47730f416dab 383 Pfam PF07687 Peptidase dimerisation domain 183 287 3.5E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PNUC_RS07630 edd0acf2f83944c4947c47730f416dab 383 SUPERFAMILY SSF53187 3 186 9.43E-62 T 22-04-2016 PNUC_RS07630 edd0acf2f83944c4947c47730f416dab 383 SUPERFAMILY SSF53187 300 381 9.43E-62 T 22-04-2016 PNUC_RS07630 edd0acf2f83944c4947c47730f416dab 383 SUPERFAMILY SSF55031 187 294 5.38E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PNUC_RS07630 edd0acf2f83944c4947c47730f416dab 383 Gene3D G3DSA:3.40.630.10 2 195 1.4E-70 T 22-04-2016 PNUC_RS07630 edd0acf2f83944c4947c47730f416dab 383 Gene3D G3DSA:3.40.630.10 324 382 1.4E-70 T 22-04-2016 PNUC_RS05340 e4229a71a6d2e68d2f29cbf7bbf5a2ef 269 PANTHER PTHR11935:SF7 7 269 3.1E-82 T 22-04-2016 PNUC_RS05340 e4229a71a6d2e68d2f29cbf7bbf5a2ef 269 PANTHER PTHR11935 7 269 3.1E-82 T 22-04-2016 PNUC_RS05340 e4229a71a6d2e68d2f29cbf7bbf5a2ef 269 SUPERFAMILY SSF56281 7 269 5.11E-65 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS05340 e4229a71a6d2e68d2f29cbf7bbf5a2ef 269 SMART SM00849 17 180 8.1E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS05340 e4229a71a6d2e68d2f29cbf7bbf5a2ef 269 PIRSF PIRSF005457 2 269 1.4E-95 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 PNUC_RS05340 e4229a71a6d2e68d2f29cbf7bbf5a2ef 269 Pfam PF00753 Metallo-beta-lactamase superfamily 18 180 2.2E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS05340 e4229a71a6d2e68d2f29cbf7bbf5a2ef 269 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 11 269 2.5E-95 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 PNUC_RS05340 e4229a71a6d2e68d2f29cbf7bbf5a2ef 269 Gene3D G3DSA:3.60.15.10 9 269 3.8E-82 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS05340 e4229a71a6d2e68d2f29cbf7bbf5a2ef 269 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 181 269 2.3E-25 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 PNUC_RS05340 e4229a71a6d2e68d2f29cbf7bbf5a2ef 269 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 7 269 41.762 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 PNUC_RS05340 e4229a71a6d2e68d2f29cbf7bbf5a2ef 269 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 55 75 - T 22-04-2016 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 PNUC_RS08135 469d4f627ca89c39f75fd1682fc10270 500 Pfam PF00171 Aldehyde dehydrogenase family 19 479 2.9E-135 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PNUC_RS08135 469d4f627ca89c39f75fd1682fc10270 500 SUPERFAMILY SSF53720 5 485 3.53E-141 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PNUC_RS08135 469d4f627ca89c39f75fd1682fc10270 500 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PNUC_RS08135 469d4f627ca89c39f75fd1682fc10270 500 PANTHER PTHR11699:SF181 1 486 3.6E-298 T 22-04-2016 PNUC_RS08135 469d4f627ca89c39f75fd1682fc10270 500 Gene3D G3DSA:3.40.309.10 264 452 2.5E-62 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PNUC_RS08135 469d4f627ca89c39f75fd1682fc10270 500 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 10 483 2.1E-215 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 PNUC_RS08135 469d4f627ca89c39f75fd1682fc10270 500 Gene3D G3DSA:3.40.605.10 6 263 3.7E-96 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PNUC_RS08135 469d4f627ca89c39f75fd1682fc10270 500 PANTHER PTHR11699 1 486 3.6E-298 T 22-04-2016 PNUC_RS02590 d7aeb19caac147f9923fdbc66763d962 374 PANTHER PTHR11751:SF347 21 370 4.2E-93 T 22-04-2016 PNUC_RS02590 d7aeb19caac147f9923fdbc66763d962 374 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 228 241 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 PNUC_RS02590 d7aeb19caac147f9923fdbc66763d962 374 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 371 59.48 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 PNUC_RS02590 d7aeb19caac147f9923fdbc66763d962 374 Pfam PF00155 Aminotransferase class I and II 34 360 5.6E-52 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PNUC_RS02590 d7aeb19caac147f9923fdbc66763d962 374 PANTHER PTHR11751 21 370 4.2E-93 T 22-04-2016 PNUC_RS02590 d7aeb19caac147f9923fdbc66763d962 374 Gene3D G3DSA:3.90.1150.10 271 371 1.9E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS02590 d7aeb19caac147f9923fdbc66763d962 374 Gene3D G3DSA:3.40.640.10 49 270 2.0E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS02590 d7aeb19caac147f9923fdbc66763d962 374 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 369 2.8E-101 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 PNUC_RS02590 d7aeb19caac147f9923fdbc66763d962 374 SUPERFAMILY SSF53383 15 371 5.57E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS08250 04ff2534ff68fcc766d73d69f1870f39 257 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 9 235 5.0E-96 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related PNUC_RS08250 04ff2534ff68fcc766d73d69f1870f39 257 Gene3D G3DSA:3.40.50.300 8 242 3.4E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08250 04ff2534ff68fcc766d73d69f1870f39 257 PIRSF PIRSF028756 1 254 1.9E-105 T 22-04-2016 IPR016898 Polyphosphate kinase 2 PNUC_RS08250 04ff2534ff68fcc766d73d69f1870f39 257 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 9 235 1.1E-104 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 PNUC_RS08250 04ff2534ff68fcc766d73d69f1870f39 257 PANTHER PTHR34383 8 230 7.7E-114 T 22-04-2016 PNUC_RS08250 04ff2534ff68fcc766d73d69f1870f39 257 SUPERFAMILY SSF52540 40 227 3.4E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08250 04ff2534ff68fcc766d73d69f1870f39 257 PANTHER PTHR34383:SF1 8 230 7.7E-114 T 22-04-2016 PNUC_RS09200 8676a1550bf7347e78947379453cc7dc 366 TIGRFAM TIGR00109 hemH: ferrochelatase 10 338 9.1E-94 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PNUC_RS09200 8676a1550bf7347e78947379453cc7dc 366 Pfam PF00762 Ferrochelatase 13 337 5.7E-114 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PNUC_RS09200 8676a1550bf7347e78947379453cc7dc 366 SUPERFAMILY SSF53800 11 343 2.8E-107 T 22-04-2016 PNUC_RS09200 8676a1550bf7347e78947379453cc7dc 366 PANTHER PTHR11108 7 338 4.7E-120 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PNUC_RS09200 8676a1550bf7347e78947379453cc7dc 366 Hamap MF_00323 Ferrochelatase [hemH]. 12 338 37.596 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PNUC_RS09200 8676a1550bf7347e78947379453cc7dc 366 Gene3D G3DSA:3.40.50.1400 12 219 6.8E-71 T 22-04-2016 PNUC_RS09200 8676a1550bf7347e78947379453cc7dc 366 Gene3D G3DSA:3.40.50.1400 220 338 2.3E-33 T 22-04-2016 PNUC_RS07270 9dd69decc93bfe7473525d1fa2aa3fb6 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 366 1.3E-33 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PNUC_RS07270 9dd69decc93bfe7473525d1fa2aa3fb6 389 PANTHER PTHR10909:SF285 9 389 3.4E-254 T 22-04-2016 PNUC_RS07270 9dd69decc93bfe7473525d1fa2aa3fb6 389 Gene3D G3DSA:1.10.540.10 9 119 9.9E-28 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PNUC_RS07270 9dd69decc93bfe7473525d1fa2aa3fb6 389 SUPERFAMILY SSF47203 233 387 4.19E-43 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PNUC_RS07270 9dd69decc93bfe7473525d1fa2aa3fb6 389 Gene3D G3DSA:2.40.110.10 123 223 1.0E-30 T 22-04-2016 PNUC_RS07270 9dd69decc93bfe7473525d1fa2aa3fb6 389 Gene3D G3DSA:1.20.140.10 224 388 2.8E-54 T 22-04-2016 PNUC_RS07270 9dd69decc93bfe7473525d1fa2aa3fb6 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 221 1.9E-20 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PNUC_RS07270 9dd69decc93bfe7473525d1fa2aa3fb6 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 118 2.3E-21 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PNUC_RS07270 9dd69decc93bfe7473525d1fa2aa3fb6 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PNUC_RS07270 9dd69decc93bfe7473525d1fa2aa3fb6 389 PANTHER PTHR10909 9 389 3.4E-254 T 22-04-2016 PNUC_RS07270 9dd69decc93bfe7473525d1fa2aa3fb6 389 SUPERFAMILY SSF56645 9 246 2.36E-59 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 PANTHER PTHR11692:SF2 1 526 8.9E-297 T 22-04-2016 PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 456 4.3E-118 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 526 9.5E-219 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 Gene3D G3DSA:3.40.140.20 374 516 1.5E-54 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 SUPERFAMILY SSF52335 2 193 4.19E-69 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 526 44.07 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 SMART SM00851 14 129 3.9E-58 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 SMART SM00798 134 458 6.0E-199 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 Pfam PF02142 MGS-like domain 14 128 7.4E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 Gene3D G3DSA:3.40.50.1380 1 186 2.7E-83 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 Gene3D G3DSA:3.40.140.20 247 366 8.1E-49 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 PIRSF PIRSF000414 1 526 3.6E-214 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 PANTHER PTHR11692 1 526 8.9E-297 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PNUC_RS09735 b910b31859b4fd39000603a89804ff40 526 SUPERFAMILY SSF53927 215 526 1.4E-124 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PNUC_RS00760 582268edfe6d14231644a7fcee432a01 594 SUPERFAMILY SSF55486 219 432 1.03E-6 T 22-04-2016 PNUC_RS00760 582268edfe6d14231644a7fcee432a01 594 Pfam PF05299 M61 glycyl aminopeptidase 283 399 4.5E-42 T 22-04-2016 IPR007963 Peptidase M61, catalytic domain PNUC_RS00760 582268edfe6d14231644a7fcee432a01 594 SUPERFAMILY SSF50156 497 575 4.86E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS00760 582268edfe6d14231644a7fcee432a01 594 Gene3D G3DSA:2.30.42.10 494 566 6.9E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS00760 582268edfe6d14231644a7fcee432a01 594 SMART SM00228 496 565 0.0015 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PNUC_RS00760 582268edfe6d14231644a7fcee432a01 594 PIRSF PIRSF016493 3 594 9.1E-169 T 22-04-2016 IPR024191 Peptidase M61 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 PANTHER PTHR22912:SF158 6 323 1.1E-93 T 22-04-2016 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 Gene3D G3DSA:3.50.50.60 251 332 3.0E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 Gene3D G3DSA:3.50.50.60 7 128 3.0E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 114 122 2.3E-20 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 2.3E-20 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 153 177 2.3E-20 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 2.3E-20 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 2.3E-20 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.2E-16 T 22-04-2016 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 1.2E-16 T 22-04-2016 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 1.2E-16 T 22-04-2016 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 1.2E-16 T 22-04-2016 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 Gene3D G3DSA:3.50.50.60 131 247 1.9E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 SUPERFAMILY SSF51905 9 320 3.53E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 Hamap MF_01685 Ferredoxin--NADP reductase. 7 333 41.352 T 22-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 PANTHER PTHR22912 6 323 1.1E-93 T 22-04-2016 PNUC_RS02005 1d001ba6f74aa3d7df39f84de6f291f2 348 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 299 2.2E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08060 409476748f77236aed4051f6b1f2c909 221 Gene3D G3DSA:1.20.120.530 82 215 3.6E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PNUC_RS08060 409476748f77236aed4051f6b1f2c909 221 SMART SM00895 86 205 8.6E-15 T 22-04-2016 IPR011711 GntR, C-terminal PNUC_RS08060 409476748f77236aed4051f6b1f2c909 221 PANTHER PTHR11751:SF384 16 102 2.9E-23 T 22-04-2016 PNUC_RS08060 409476748f77236aed4051f6b1f2c909 221 SUPERFAMILY SSF48008 83 212 2.01E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PNUC_RS08060 409476748f77236aed4051f6b1f2c909 221 Gene3D G3DSA:1.10.10.10 9 77 2.0E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08060 409476748f77236aed4051f6b1f2c909 221 SUPERFAMILY SSF46785 10 80 5.04E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08060 409476748f77236aed4051f6b1f2c909 221 SMART SM00345 18 76 9.0E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS08060 409476748f77236aed4051f6b1f2c909 221 PANTHER PTHR11751 16 102 2.9E-23 T 22-04-2016 PNUC_RS08060 409476748f77236aed4051f6b1f2c909 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 76 7.8E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS08060 409476748f77236aed4051f6b1f2c909 221 Pfam PF07729 FCD domain 87 203 1.2E-16 T 22-04-2016 IPR011711 GntR, C-terminal PNUC_RS06630 5690117a496e0d41f35b0a5eaefb6767 236 PANTHER PTHR11934:SF11 1 234 1.1E-94 T 22-04-2016 PNUC_RS06630 5690117a496e0d41f35b0a5eaefb6767 236 Gene3D G3DSA:3.30.70.260 143 213 2.1E-23 T 22-04-2016 PNUC_RS06630 5690117a496e0d41f35b0a5eaefb6767 236 SUPERFAMILY SSF75445 129 215 4.58E-19 T 22-04-2016 PNUC_RS06630 5690117a496e0d41f35b0a5eaefb6767 236 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 234 29.833 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PNUC_RS06630 5690117a496e0d41f35b0a5eaefb6767 236 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 228 1.8E-53 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PNUC_RS06630 5690117a496e0d41f35b0a5eaefb6767 236 Gene3D G3DSA:3.40.50.1360 4 142 1.5E-49 T 22-04-2016 PNUC_RS06630 5690117a496e0d41f35b0a5eaefb6767 236 SUPERFAMILY SSF100950 1 150 2.62E-38 T 22-04-2016 PNUC_RS06630 5690117a496e0d41f35b0a5eaefb6767 236 PANTHER PTHR11934 1 234 1.1E-94 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PNUC_RS06630 5690117a496e0d41f35b0a5eaefb6767 236 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 230 1.7E-57 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PNUC_RS04365 adecfd30351eb1d8e6b18df0a866a56d 94 SUPERFAMILY SSF81273 59 94 2.08E-9 T 22-04-2016 PNUC_RS04365 adecfd30351eb1d8e6b18df0a866a56d 94 Gene3D G3DSA:4.10.430.10 60 85 2.3E-6 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 PNUC_RS04365 adecfd30351eb1d8e6b18df0a866a56d 94 Pfam PF00816 H-NS histone family 6 85 3.0E-23 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 PNUC_RS04365 adecfd30351eb1d8e6b18df0a866a56d 94 SMART SM00528 55 94 6.2E-8 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 PNUC_RS00325 af737983635ce8fa2c918887db4475f1 104 SUPERFAMILY SSF54189 8 97 1.01E-28 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00325 af737983635ce8fa2c918887db4475f1 104 Pfam PF00276 Ribosomal protein L23 13 99 2.6E-30 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00325 af737983635ce8fa2c918887db4475f1 104 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 102 21.256 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00325 af737983635ce8fa2c918887db4475f1 104 PANTHER PTHR11620 2 97 9.5E-25 T 22-04-2016 PNUC_RS00325 af737983635ce8fa2c918887db4475f1 104 Gene3D G3DSA:3.30.70.330 10 101 4.1E-32 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 PANTHER PTHR23083 541 641 4.6E-38 T 22-04-2016 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 PANTHER PTHR23083 206 464 4.6E-38 T 22-04-2016 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 PANTHER PTHR23083 42 79 4.6E-38 T 22-04-2016 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 PANTHER PTHR23083 765 825 4.6E-38 T 22-04-2016 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 Gene3D G3DSA:1.25.40.10 767 826 2.0E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 Gene3D G3DSA:1.25.40.10 542 721 2.0E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 Gene3D G3DSA:1.25.40.10 287 520 1.1E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 Pfam PF13432 Tetratricopeptide repeat 396 459 0.0085 T 22-04-2016 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 Pfam PF13432 Tetratricopeptide repeat 287 342 0.0025 T 22-04-2016 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 SUPERFAMILY SSF48452 205 282 1.85E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 Pfam PF00515 Tetratricopeptide repeat 237 268 1.7E-9 T 22-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 Pfam PF14559 Tetratricopeptide repeat 545 603 1.8E-8 T 22-04-2016 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 SUPERFAMILY SSF48452 652 825 1.99E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 SMART SM00028 569 602 120.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 SMART SM00028 425 458 480.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 SMART SM00028 535 568 340.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 SMART SM00028 391 424 5.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 SMART SM00028 235 268 3.2E-8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 SMART SM00028 281 314 67.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 SMART SM00028 315 348 1.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 PRINTS PR01441 Cellulose synthase subunit C signature 73 85 1.1E-15 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 PRINTS PR01441 Cellulose synthase subunit C signature 1118 1142 1.1E-15 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 PRINTS PR01441 Cellulose synthase subunit C signature 338 358 1.1E-15 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 PRINTS PR01441 Cellulose synthase subunit C signature 1158 1179 1.1E-15 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 PRINTS PR01441 Cellulose synthase subunit C signature 255 281 1.1E-15 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 SUPERFAMILY SSF48452 293 464 1.14E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 SUPERFAMILY SSF48452 541 666 1.14E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 Gene3D G3DSA:1.25.40.10 42 127 5.4E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 Gene3D G3DSA:1.25.40.10 163 286 5.4E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS06150 40fa7a19b027727df52e0c5f4e303bbf 1271 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 916 1250 1.9E-110 T 22-04-2016 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 UniPathway: UPA00694 PNUC_RS05165 d5068b40610dc6d11881cf7625bc08df 260 PANTHER PTHR30085 34 252 8.0E-69 T 22-04-2016 PNUC_RS05165 d5068b40610dc6d11881cf7625bc08df 260 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 37 140 5.4E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PNUC_RS05165 d5068b40610dc6d11881cf7625bc08df 260 Gene3D G3DSA:1.10.3720.10 36 245 5.8E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS05165 d5068b40610dc6d11881cf7625bc08df 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 57 246 1.5E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS05165 d5068b40610dc6d11881cf7625bc08df 260 SUPERFAMILY SSF161098 37 231 4.45E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS05165 d5068b40610dc6d11881cf7625bc08df 260 PANTHER PTHR30085:SF4 34 252 8.0E-69 T 22-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 PNUC_RS00335 ba1a689ae5552b2f6c6f27441a0916e9 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 PNUC_RS00335 ba1a689ae5552b2f6c6f27441a0916e9 92 PIRSF PIRSF002144 1 92 1.0E-33 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00335 ba1a689ae5552b2f6c6f27441a0916e9 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 90 7.0E-44 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 PNUC_RS00335 ba1a689ae5552b2f6c6f27441a0916e9 92 SUPERFAMILY SSF54570 3 84 1.7E-34 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 PNUC_RS00335 ba1a689ae5552b2f6c6f27441a0916e9 92 Gene3D G3DSA:3.30.860.10 1 90 4.7E-41 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 PNUC_RS00335 ba1a689ae5552b2f6c6f27441a0916e9 92 Pfam PF00203 Ribosomal protein S19 3 83 6.5E-37 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00335 ba1a689ae5552b2f6c6f27441a0916e9 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00335 ba1a689ae5552b2f6c6f27441a0916e9 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00335 ba1a689ae5552b2f6c6f27441a0916e9 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00335 ba1a689ae5552b2f6c6f27441a0916e9 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.188 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00335 ba1a689ae5552b2f6c6f27441a0916e9 92 PANTHER PTHR11880 1 92 6.0E-51 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 SUPERFAMILY SSF55979 131 249 4.14E-26 T 22-04-2016 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 251 370 8.4E-37 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 Gene3D G3DSA:3.10.150.10 6 122 8.0E-26 T 22-04-2016 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 Gene3D G3DSA:3.10.150.10 254 371 8.0E-40 T 22-04-2016 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 SUPERFAMILY SSF55979 250 371 1.93E-38 T 22-04-2016 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 Gene3D G3DSA:3.10.150.10 130 253 6.7E-35 T 22-04-2016 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 SMART SM00480 18 367 1.1E-120 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 PIRSF PIRSF000804 1 371 6.3E-113 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 248 2.7E-33 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 PANTHER PTHR30478 4 371 1.1E-116 T 22-04-2016 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 SUPERFAMILY SSF55979 6 117 3.59E-22 T 22-04-2016 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 5 370 2.0E-96 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS00010 935cb4713f7ca3c4bbb27a20c19532c9 371 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 7 119 1.7E-28 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS06025 4e61865f61c556fd1dce260f5b4fc1e6 279 Pfam PF12849 PBP superfamily domain 37 262 1.5E-25 T 22-04-2016 IPR024370 PBP domain PNUC_RS06025 4e61865f61c556fd1dce260f5b4fc1e6 279 Gene3D G3DSA:3.40.190.10 114 239 4.9E-34 T 22-04-2016 PNUC_RS06025 4e61865f61c556fd1dce260f5b4fc1e6 279 SUPERFAMILY SSF53850 36 277 3.04E-52 T 22-04-2016 PNUC_RS06025 4e61865f61c556fd1dce260f5b4fc1e6 279 PANTHER PTHR30570:SF1 36 273 7.4E-46 T 22-04-2016 PNUC_RS06025 4e61865f61c556fd1dce260f5b4fc1e6 279 PANTHER PTHR30570 36 273 7.4E-46 T 22-04-2016 PNUC_RS09415 5232731099fa362a08c84cc2ce41acbb 298 PANTHER PTHR11609:SF6 9 297 1.6E-139 T 22-04-2016 PNUC_RS09415 5232731099fa362a08c84cc2ce41acbb 298 ProSitePatterns PS01057 SAICAR synthetase signature 1. 105 119 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PNUC_RS09415 5232731099fa362a08c84cc2ce41acbb 298 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 15 297 3.2E-81 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PNUC_RS09415 5232731099fa362a08c84cc2ce41acbb 298 PANTHER PTHR11609 9 297 1.6E-139 T 22-04-2016 PNUC_RS09415 5232731099fa362a08c84cc2ce41acbb 298 Pfam PF01259 SAICAR synthetase 14 263 5.7E-103 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PNUC_RS09415 5232731099fa362a08c84cc2ce41acbb 298 Gene3D G3DSA:3.30.470.20 117 247 8.4E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS09415 5232731099fa362a08c84cc2ce41acbb 298 Gene3D G3DSA:3.30.200.20 5 116 1.8E-42 T 22-04-2016 PNUC_RS09415 5232731099fa362a08c84cc2ce41acbb 298 SUPERFAMILY SSF56104 5 296 1.18E-103 T 22-04-2016 PNUC_RS09415 5232731099fa362a08c84cc2ce41acbb 298 ProSitePatterns PS01058 SAICAR synthetase signature 2. 204 212 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PNUC_RS09415 5232731099fa362a08c84cc2ce41acbb 298 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 12 297 26.176 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PNUC_RS03455 538ff4184f65d45e9dc1bee0806b0635 211 SUPERFAMILY SSF50475 7 211 1.98E-67 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PNUC_RS03455 538ff4184f65d45e9dc1bee0806b0635 211 PIRSF PIRSF000190 1 211 9.2E-82 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PNUC_RS03455 538ff4184f65d45e9dc1bee0806b0635 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PNUC_RS03455 538ff4184f65d45e9dc1bee0806b0635 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 211 1.2E-86 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PNUC_RS03455 538ff4184f65d45e9dc1bee0806b0635 211 PANTHER PTHR10851:SF0 1 211 1.8E-104 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PNUC_RS03455 538ff4184f65d45e9dc1bee0806b0635 211 PANTHER PTHR10851 1 211 1.8E-104 T 22-04-2016 PNUC_RS03455 538ff4184f65d45e9dc1bee0806b0635 211 Gene3D G3DSA:2.30.110.10 10 211 6.9E-84 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PNUC_RS03455 538ff4184f65d45e9dc1bee0806b0635 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 211 39.345 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PNUC_RS03455 538ff4184f65d45e9dc1bee0806b0635 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 119 9.2E-25 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PNUC_RS03455 538ff4184f65d45e9dc1bee0806b0635 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 7.0E-20 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 Pfam PF10415 Fumarase C C-terminus 410 462 3.6E-20 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 Gene3D G3DSA:1.10.275.10 5 141 3.0E-56 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 Gene3D G3DSA:1.20.200.10 142 419 1.7E-88 T 22-04-2016 PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 PANTHER PTHR11444 1 467 2.3E-238 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 SUPERFAMILY SSF48557 5 459 8.33E-147 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 9.5E-31 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 9.5E-31 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 9.5E-31 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 9.5E-31 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 Pfam PF00206 Lyase 14 344 1.3E-106 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 PRINTS PR00145 Argininosuccinate lyase family signature 136 158 8.8E-6 T 22-04-2016 PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 PRINTS PR00145 Argininosuccinate lyase family signature 319 335 8.8E-6 T 22-04-2016 PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 PRINTS PR00145 Argininosuccinate lyase family signature 177 197 8.8E-6 T 22-04-2016 PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 PANTHER PTHR11444:SF25 1 467 2.3E-238 T 22-04-2016 PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PNUC_RS09075 e6e369b0d94bb04776cfccbc20e3465f 469 Gene3D G3DSA:1.10.40.30 420 467 3.8E-21 T 22-04-2016 PNUC_RS08675 e96e5ff3606637f597640fc69ebb1284 189 Pfam PF02669 K+-transporting ATPase, c chain 7 187 6.4E-74 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PNUC_RS08675 e96e5ff3606637f597640fc69ebb1284 189 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 189 34.051 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PNUC_RS08675 e96e5ff3606637f597640fc69ebb1284 189 PIRSF PIRSF001296 1 189 2.9E-77 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PNUC_RS08675 e96e5ff3606637f597640fc69ebb1284 189 PANTHER PTHR30042 1 187 5.5E-86 T 22-04-2016 PNUC_RS08675 e96e5ff3606637f597640fc69ebb1284 189 PANTHER PTHR30042:SF2 1 187 5.5E-86 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PNUC_RS08675 e96e5ff3606637f597640fc69ebb1284 189 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 6 187 2.8E-69 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PNUC_RS01775 93413bcadae41d36795e900e8748b3af 345 Pfam PF01699 Sodium/calcium exchanger protein 15 169 9.2E-17 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 PNUC_RS01775 93413bcadae41d36795e900e8748b3af 345 Pfam PF01699 Sodium/calcium exchanger protein 201 343 8.4E-13 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 PNUC_RS01775 93413bcadae41d36795e900e8748b3af 345 PANTHER PTHR37958:SF1 1 345 9.0E-91 T 22-04-2016 PNUC_RS01775 93413bcadae41d36795e900e8748b3af 345 PANTHER PTHR37958 1 345 9.0E-91 T 22-04-2016 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 PANTHER PTHR22912 214 327 5.0E-26 T 22-04-2016 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 PANTHER PTHR22912 176 197 5.0E-26 T 22-04-2016 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 PANTHER PTHR22912 1 158 5.0E-26 T 22-04-2016 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 349 1.5E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.75E-16 T 22-04-2016 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 301 323 5.75E-16 T 22-04-2016 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 5.75E-16 T 22-04-2016 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 118 136 5.75E-16 T 22-04-2016 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 SUPERFAMILY SSF51905 4 327 1.73E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 Gene3D G3DSA:3.50.50.60 127 356 1.7E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 Gene3D G3DSA:3.50.50.60 5 126 5.3E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 323 1.05E-9 T 22-04-2016 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.05E-9 T 22-04-2016 PNUC_RS05175 f11a74e559e189e1eb2458fbb6a82e29 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.05E-9 T 22-04-2016 PNUC_RS05470 007cefe880a62698bc37d59155a6f57d 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 2.7E-123 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 PNUC_RS05470 007cefe880a62698bc37d59155a6f57d 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 49.631 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 PNUC_RS05470 007cefe880a62698bc37d59155a6f57d 417 Gene3D G3DSA:1.10.645.10 6 403 1.7E-61 T 22-04-2016 IPR029014 NiFe hydrogenase-like PNUC_RS05470 007cefe880a62698bc37d59155a6f57d 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 2.4E-185 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 PNUC_RS05470 007cefe880a62698bc37d59155a6f57d 417 PANTHER PTHR11993 190 412 2.2E-236 T 22-04-2016 PNUC_RS05470 007cefe880a62698bc37d59155a6f57d 417 PANTHER PTHR11993 2 164 2.2E-236 T 22-04-2016 PNUC_RS05470 007cefe880a62698bc37d59155a6f57d 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 PNUC_RS05470 007cefe880a62698bc37d59155a6f57d 417 SUPERFAMILY SSF56762 16 417 3.79E-136 T 22-04-2016 IPR029014 NiFe hydrogenase-like PNUC_RS05470 007cefe880a62698bc37d59155a6f57d 417 PANTHER PTHR11993:SF10 190 412 2.2E-236 T 22-04-2016 PNUC_RS05470 007cefe880a62698bc37d59155a6f57d 417 PANTHER PTHR11993:SF10 2 164 2.2E-236 T 22-04-2016 PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 SMART SM00278 73 92 7.8 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 SMART SM00278 108 127 0.15 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 Gene3D G3DSA:1.10.8.10 148 190 2.7E-8 T 22-04-2016 PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 Gene3D G3DSA:1.10.150.20 68 132 5.3E-29 T 22-04-2016 PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 Pfam PF01330 RuvA N terminal domain 1 62 2.8E-21 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 SUPERFAMILY SSF50249 1 63 1.09E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 Pfam PF14520 Helix-hairpin-helix domain 72 129 1.7E-17 T 22-04-2016 PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 184 2.6E-55 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 191 30.536 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 SUPERFAMILY SSF46929 149 192 1.96E-8 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 Gene3D G3DSA:2.40.50.140 1 66 2.9E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 Pfam PF07499 RuvA, C-terminal domain 148 191 2.5E-12 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 SUPERFAMILY SSF47781 65 133 1.84E-21 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PNUC_RS09745 503eddfac1340e8d2a973b55a9723f38 193 PANTHER PTHR33796 2 193 3.6E-69 T 22-04-2016 PNUC_RS00065 785e401ceba2b53b856d992fec92c4bd 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 207 4.4E-16 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PNUC_RS00065 785e401ceba2b53b856d992fec92c4bd 389 Gene3D G3DSA:1.20.140.10 225 387 4.4E-50 T 22-04-2016 PNUC_RS00065 785e401ceba2b53b856d992fec92c4bd 389 PANTHER PTHR10909 1 380 3.5E-102 T 22-04-2016 PNUC_RS00065 785e401ceba2b53b856d992fec92c4bd 389 Gene3D G3DSA:1.10.540.10 1 126 8.9E-28 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PNUC_RS00065 785e401ceba2b53b856d992fec92c4bd 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PNUC_RS00065 785e401ceba2b53b856d992fec92c4bd 389 Gene3D G3DSA:2.40.110.10 127 224 6.8E-28 T 22-04-2016 PNUC_RS00065 785e401ceba2b53b856d992fec92c4bd 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 3.5E-37 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PNUC_RS00065 785e401ceba2b53b856d992fec92c4bd 389 SUPERFAMILY SSF47203 232 384 3.22E-46 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PNUC_RS00065 785e401ceba2b53b856d992fec92c4bd 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 123 1.0E-17 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PNUC_RS00065 785e401ceba2b53b856d992fec92c4bd 389 PANTHER PTHR10909:SF195 1 380 3.5E-102 T 22-04-2016 PNUC_RS00065 785e401ceba2b53b856d992fec92c4bd 389 SUPERFAMILY SSF56645 1 245 1.44E-61 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PNUC_RS10635 1af19c200d5954d01cd11dfa87fea420 319 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 7 315 3.9E-113 T 22-04-2016 IPR010293 Na+-dependent bicarbonate transporter superfamily PNUC_RS10635 1af19c200d5954d01cd11dfa87fea420 319 PANTHER PTHR40400 1 319 3.4E-89 T 22-04-2016 IPR010293 Na+-dependent bicarbonate transporter superfamily PNUC_RS01340 db72a35fe4ba3a57e3e8c03d1c190c66 352 Gene3D G3DSA:3.90.25.10 192 348 9.2E-56 T 22-04-2016 PNUC_RS01340 db72a35fe4ba3a57e3e8c03d1c190c66 352 SUPERFAMILY SSF51735 2 349 1.66E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01340 db72a35fe4ba3a57e3e8c03d1c190c66 352 PANTHER PTHR10366 1 351 5.1E-166 T 22-04-2016 PNUC_RS01340 db72a35fe4ba3a57e3e8c03d1c190c66 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 336 2.8E-152 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PNUC_RS01340 db72a35fe4ba3a57e3e8c03d1c190c66 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 324 1.4E-98 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01340 db72a35fe4ba3a57e3e8c03d1c190c66 352 Gene3D G3DSA:3.40.50.720 2 191 5.7E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01340 db72a35fe4ba3a57e3e8c03d1c190c66 352 PANTHER PTHR10366:SF41 1 351 5.1E-166 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PNUC_RS06570 c0baffeb38ea4af453fd9d22fdad7c74 282 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 6 279 1.6E-65 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PNUC_RS06570 c0baffeb38ea4af453fd9d22fdad7c74 282 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 9 272 1.7E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PNUC_RS06570 c0baffeb38ea4af453fd9d22fdad7c74 282 SUPERFAMILY SSF56219 5 279 1.31E-70 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PNUC_RS06570 c0baffeb38ea4af453fd9d22fdad7c74 282 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 236 247 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PNUC_RS06570 c0baffeb38ea4af453fd9d22fdad7c74 282 Gene3D G3DSA:3.60.10.10 5 279 4.2E-75 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PNUC_RS06570 c0baffeb38ea4af453fd9d22fdad7c74 282 PANTHER PTHR22748:SF7 5 281 1.7E-90 T 22-04-2016 PNUC_RS06570 c0baffeb38ea4af453fd9d22fdad7c74 282 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 6 279 1.1E-71 T 22-04-2016 PNUC_RS06570 c0baffeb38ea4af453fd9d22fdad7c74 282 PANTHER PTHR22748 5 281 1.7E-90 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PNUC_RS09700 6c1b61473c6a72c15b3fc7ac9453fd73 839 Gene3D G3DSA:2.60.450.10 107 231 2.4E-5 T 22-04-2016 PNUC_RS09700 6c1b61473c6a72c15b3fc7ac9453fd73 839 PANTHER PTHR30189 477 838 2.2E-49 T 22-04-2016 PNUC_RS09700 6c1b61473c6a72c15b3fc7ac9453fd73 839 PANTHER PTHR30189 106 459 2.2E-49 T 22-04-2016 PNUC_RS09700 6c1b61473c6a72c15b3fc7ac9453fd73 839 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 11 807 17.49 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 PNUC_RS09700 6c1b61473c6a72c15b3fc7ac9453fd73 839 Pfam PF04453 Organic solvent tolerance protein 350 745 2.0E-63 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 PNUC_RS03495 e7c6b5fcee7fc8320079b9df9b421b87 730 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 225 332 3.5E-8 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PNUC_RS03495 e7c6b5fcee7fc8320079b9df9b421b87 730 Gene3D G3DSA:3.30.470.20 217 232 1.6E-4 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS03495 e7c6b5fcee7fc8320079b9df9b421b87 730 Gene3D G3DSA:3.30.470.20 398 458 1.6E-4 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS03495 e7c6b5fcee7fc8320079b9df9b421b87 730 Gene3D G3DSA:3.40.1190.10 486 720 3.1E-17 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS03495 e7c6b5fcee7fc8320079b9df9b421b87 730 SUPERFAMILY SSF56059 225 492 6.91E-32 T 22-04-2016 PNUC_RS03495 e7c6b5fcee7fc8320079b9df9b421b87 730 PANTHER PTHR23135 392 722 9.9E-37 T 22-04-2016 PNUC_RS03495 e7c6b5fcee7fc8320079b9df9b421b87 730 Gene3D G3DSA:3.30.470.20 233 336 5.1E-21 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS03495 e7c6b5fcee7fc8320079b9df9b421b87 730 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 10 729 1.3E-266 T 22-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 PNUC_RS03495 e7c6b5fcee7fc8320079b9df9b421b87 730 SMART SM01209 224 343 0.0049 T 22-04-2016 PNUC_RS03495 e7c6b5fcee7fc8320079b9df9b421b87 730 PANTHER PTHR23135:SF18 392 722 9.9E-37 T 22-04-2016 PNUC_RS03495 e7c6b5fcee7fc8320079b9df9b421b87 730 SUPERFAMILY SSF53623 487 720 1.98E-19 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS01995 edc217a15d4444e1735ec3e0f07cf92f 162 PIRSF PIRSF000194 1 162 3.1E-58 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PNUC_RS01995 edc217a15d4444e1735ec3e0f07cf92f 162 SUPERFAMILY SSF53597 2 162 1.7E-56 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain PNUC_RS01995 edc217a15d4444e1735ec3e0f07cf92f 162 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 17 39 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PNUC_RS01995 edc217a15d4444e1735ec3e0f07cf92f 162 Pfam PF00186 Dihydrofolate reductase 6 161 2.0E-56 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PNUC_RS01995 edc217a15d4444e1735ec3e0f07cf92f 162 PANTHER PTHR22778 6 162 2.7E-43 T 22-04-2016 PNUC_RS01995 edc217a15d4444e1735ec3e0f07cf92f 162 PRINTS PR00070 Dihydrofolate reductase signature 95 109 1.8E-16 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PNUC_RS01995 edc217a15d4444e1735ec3e0f07cf92f 162 PRINTS PR00070 Dihydrofolate reductase signature 31 39 1.8E-16 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PNUC_RS01995 edc217a15d4444e1735ec3e0f07cf92f 162 PRINTS PR00070 Dihydrofolate reductase signature 17 27 1.8E-16 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PNUC_RS01995 edc217a15d4444e1735ec3e0f07cf92f 162 PRINTS PR00070 Dihydrofolate reductase signature 44 55 1.8E-16 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PNUC_RS01995 edc217a15d4444e1735ec3e0f07cf92f 162 Gene3D G3DSA:3.40.430.10 3 162 1.2E-60 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain PNUC_RS01995 edc217a15d4444e1735ec3e0f07cf92f 162 PANTHER PTHR22778:SF16 6 162 2.7E-43 T 22-04-2016 PNUC_RS03190 3e93c3f8dafe7eae48fe18b478d1fb62 487 Pfam PF10150 Ribonuclease E/G family 113 391 2.7E-98 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PNUC_RS03190 3e93c3f8dafe7eae48fe18b478d1fb62 487 SUPERFAMILY SSF50249 39 117 2.4E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS03190 3e93c3f8dafe7eae48fe18b478d1fb62 487 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 6.5E-147 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PNUC_RS03190 3e93c3f8dafe7eae48fe18b478d1fb62 487 PANTHER PTHR30001 1 486 4.2E-182 T 22-04-2016 PNUC_RS03190 3e93c3f8dafe7eae48fe18b478d1fb62 487 SMART SM00316 37 111 2.3E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS03190 3e93c3f8dafe7eae48fe18b478d1fb62 487 Gene3D G3DSA:2.40.50.140 30 117 2.9E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS01855 e125a6760252e2fc345793ca6dbfcb2d 539 PIRSF PIRSF000137 1 539 3.8E-144 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PNUC_RS01855 e125a6760252e2fc345793ca6dbfcb2d 539 SUPERFAMILY SSF54373 297 480 2.65E-59 T 22-04-2016 PNUC_RS01855 e125a6760252e2fc345793ca6dbfcb2d 539 PANTHER PTHR11552 3 539 1.5E-201 T 22-04-2016 PNUC_RS01855 e125a6760252e2fc345793ca6dbfcb2d 539 Pfam PF05199 GMC oxidoreductase 394 531 2.6E-40 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 PNUC_RS01855 e125a6760252e2fc345793ca6dbfcb2d 539 SUPERFAMILY SSF51905 479 538 1.5E-82 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS01855 e125a6760252e2fc345793ca6dbfcb2d 539 SUPERFAMILY SSF51905 5 295 1.5E-82 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS01855 e125a6760252e2fc345793ca6dbfcb2d 539 Gene3D G3DSA:3.50.50.60 190 320 4.8E-117 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS01855 e125a6760252e2fc345793ca6dbfcb2d 539 Gene3D G3DSA:3.50.50.60 479 537 4.8E-117 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS01855 e125a6760252e2fc345793ca6dbfcb2d 539 Gene3D G3DSA:3.50.50.60 3 129 4.8E-117 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS01855 e125a6760252e2fc345793ca6dbfcb2d 539 PANTHER PTHR11552:SF51 3 539 1.5E-201 T 22-04-2016 PNUC_RS01855 e125a6760252e2fc345793ca6dbfcb2d 539 Gene3D G3DSA:3.30.410.10 331 478 5.1E-6 T 22-04-2016 PNUC_RS01855 e125a6760252e2fc345793ca6dbfcb2d 539 Pfam PF00732 GMC oxidoreductase 7 302 3.2E-79 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PNUC_RS05370 500bb8f834c103b909779d858b7ee319 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 11 359 3.1E-83 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PNUC_RS05370 500bb8f834c103b909779d858b7ee319 363 Gene3D G3DSA:3.40.718.10 11 353 1.2E-115 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PNUC_RS05370 500bb8f834c103b909779d858b7ee319 363 SMART SM01329 11 359 5.1E-174 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PNUC_RS05370 500bb8f834c103b909779d858b7ee319 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 249 268 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PNUC_RS05370 500bb8f834c103b909779d858b7ee319 363 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 8 363 4.5E-168 T 22-04-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 PNUC_RS05370 500bb8f834c103b909779d858b7ee319 363 PANTHER PTHR11835 11 363 5.7E-215 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PNUC_RS05370 500bb8f834c103b909779d858b7ee319 363 SUPERFAMILY SSF53659 4 363 6.91E-114 T 22-04-2016 PNUC_RS05370 500bb8f834c103b909779d858b7ee319 363 PANTHER PTHR11835:SF37 11 363 5.7E-215 T 22-04-2016 PNUC_RS07095 bbe43dc61350be9697c9cc7291031d43 175 SUPERFAMILY SSF58113 22 155 1.14E-5 T 22-04-2016 PNUC_RS07095 bbe43dc61350be9697c9cc7291031d43 175 Gene3D G3DSA:1.10.20.10 49 119 5.6E-4 T 22-04-2016 IPR009072 Histone-fold GO:0046982 PNUC_RS07095 bbe43dc61350be9697c9cc7291031d43 175 Pfam PF09361 Phasin protein 5 100 1.5E-5 T 22-04-2016 IPR018968 Phasin PNUC_RS04185 e86e51d1ce06e637fb4239765cb36b7f 102 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 100 9.4E-37 T 22-04-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ PNUC_RS04185 e86e51d1ce06e637fb4239765cb36b7f 102 SUPERFAMILY SSF81296 2 99 4.9E-31 T 22-04-2016 IPR014756 Immunoglobulin E-set PNUC_RS04185 e86e51d1ce06e637fb4239765cb36b7f 102 Gene3D G3DSA:2.60.40.10 4 100 3.1E-35 T 22-04-2016 IPR013783 Immunoglobulin-like fold PNUC_RS04185 e86e51d1ce06e637fb4239765cb36b7f 102 Pfam PF08770 Sulphur oxidation protein SoxZ 7 99 7.8E-35 T 22-04-2016 IPR014880 Sulphur oxidation protein SoxZ PNUC_RS06205 b9bc39eda3ab16cb85b68afa373b101c 323 Pfam PF09084 NMT1/THI5 like 43 246 1.0E-21 T 22-04-2016 IPR015168 SsuA/THI5-like PNUC_RS06205 b9bc39eda3ab16cb85b68afa373b101c 323 Gene3D G3DSA:3.40.190.10 113 197 1.3E-9 T 22-04-2016 PNUC_RS06205 b9bc39eda3ab16cb85b68afa373b101c 323 SUPERFAMILY SSF53850 29 256 5.85E-31 T 22-04-2016 PNUC_RS06205 b9bc39eda3ab16cb85b68afa373b101c 323 PANTHER PTHR31528 42 313 2.0E-21 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 PNUC_RS00045 93f1cce764ace41bba7714aa4d3ee4bb 294 PANTHER PTHR11795 9 293 3.9E-115 T 22-04-2016 PNUC_RS00045 93f1cce764ace41bba7714aa4d3ee4bb 294 PANTHER PTHR11795:SF379 9 293 3.9E-115 T 22-04-2016 PNUC_RS00045 93f1cce764ace41bba7714aa4d3ee4bb 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 16 282 3.9E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 Gene3D G3DSA:3.40.50.720 139 263 4.8E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 PANTHER PTHR10025 1 281 5.4E-158 T 22-04-2016 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 Gene3D G3DSA:3.40.192.10 7 138 3.8E-49 T 22-04-2016 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.23E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 1.23E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.23E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.23E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.23E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.23E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.23E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 38.641 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 7.4E-71 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 SUPERFAMILY SSF53223 1 121 1.34E-39 T 22-04-2016 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 1.3E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PNUC_RS03820 e094da20add71a5aedfbc8a97b84b032 284 SUPERFAMILY SSF51735 122 279 1.69E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10415 d0929bf0d4581b573cd2013e3f7b8eb0 300 PIRSF PIRSF000728 18 299 6.8E-102 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS10415 d0929bf0d4581b573cd2013e3f7b8eb0 300 PANTHER PTHR23342 8 298 1.9E-107 T 22-04-2016 PNUC_RS10415 d0929bf0d4581b573cd2013e3f7b8eb0 300 Gene3D G3DSA:3.40.1160.10 31 298 3.6E-101 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS10415 d0929bf0d4581b573cd2013e3f7b8eb0 300 Pfam PF00696 Amino acid kinase family 33 276 3.4E-43 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS10415 d0929bf0d4581b573cd2013e3f7b8eb0 300 Hamap MF_00082_B Acetylglutamate kinase [argB]. 31 299 35.581 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS10415 d0929bf0d4581b573cd2013e3f7b8eb0 300 Hamap MF_00082_A Acetylglutamate kinase [argB]. 34 284 28.981 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS10415 d0929bf0d4581b573cd2013e3f7b8eb0 300 SUPERFAMILY SSF53633 15 299 3.67E-89 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS10415 d0929bf0d4581b573cd2013e3f7b8eb0 300 PRINTS PR00474 Glutamate 5-kinase family signature 199 226 5.8E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PNUC_RS10415 d0929bf0d4581b573cd2013e3f7b8eb0 300 PRINTS PR00474 Glutamate 5-kinase family signature 249 269 5.8E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PNUC_RS10415 d0929bf0d4581b573cd2013e3f7b8eb0 300 PRINTS PR00474 Glutamate 5-kinase family signature 64 78 5.8E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PNUC_RS10415 d0929bf0d4581b573cd2013e3f7b8eb0 300 TIGRFAM TIGR00761 argB: acetylglutamate kinase 34 274 4.1E-74 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS06255 8abbe3a53be22fe8d8bb6c0c2f86865e 206 Hamap MF_01389 Urease accessory protein UreG [ureG]. 7 205 46.575 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PNUC_RS06255 8abbe3a53be22fe8d8bb6c0c2f86865e 206 PIRSF PIRSF005624 2 205 1.3E-47 T 22-04-2016 PNUC_RS06255 8abbe3a53be22fe8d8bb6c0c2f86865e 206 PANTHER PTHR31715 8 204 1.4E-121 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PNUC_RS06255 8abbe3a53be22fe8d8bb6c0c2f86865e 206 Gene3D G3DSA:3.40.50.300 8 200 8.7E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06255 8abbe3a53be22fe8d8bb6c0c2f86865e 206 SMART SM00382 7 156 0.0016 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS06255 8abbe3a53be22fe8d8bb6c0c2f86865e 206 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 9 203 3.0E-100 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PNUC_RS06255 8abbe3a53be22fe8d8bb6c0c2f86865e 206 SUPERFAMILY SSF52540 4 200 4.63E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06255 8abbe3a53be22fe8d8bb6c0c2f86865e 206 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 181 5.6E-39 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PNUC_RS01545 dcb6b1666ee742faab3bd4b53b8e345a 123 PANTHER PTHR35371 1 122 3.2E-28 T 22-04-2016 PNUC_RS01545 dcb6b1666ee742faab3bd4b53b8e345a 123 SUPERFAMILY SSF161084 4 122 2.75E-29 T 22-04-2016 PNUC_RS01545 dcb6b1666ee742faab3bd4b53b8e345a 123 PANTHER PTHR35371:SF1 1 122 3.2E-28 T 22-04-2016 PNUC_RS01545 dcb6b1666ee742faab3bd4b53b8e345a 123 Pfam PF01124 MAPEG family 4 122 8.3E-25 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein PNUC_RS01545 dcb6b1666ee742faab3bd4b53b8e345a 123 Gene3D G3DSA:1.20.120.550 4 123 6.6E-20 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain PNUC_RS05390 20021c776e0cf89adb74b5ad6cfada31 436 Pfam PF01425 Amidase 25 417 4.7E-74 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS05390 20021c776e0cf89adb74b5ad6cfada31 436 Gene3D G3DSA:3.90.1300.10 2 428 2.3E-105 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS05390 20021c776e0cf89adb74b5ad6cfada31 436 SUPERFAMILY SSF75304 2 427 1.83E-102 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS05390 20021c776e0cf89adb74b5ad6cfada31 436 PANTHER PTHR11895 3 434 2.6E-103 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 SUPERFAMILY SSF56037 346 428 2.25E-18 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 360 401 3.9E-10 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 PANTHER PTHR11807 11 411 2.4E-67 T 22-04-2016 PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 Pfam PF09179 TilS substrate binding domain 262 321 5.4E-11 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 SUPERFAMILY SSF82829 239 325 5.1E-16 T 22-04-2016 PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 Pfam PF11734 TilS substrate C-terminal domain 359 427 4.2E-19 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 4 314 22.978 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 Gene3D G3DSA:3.40.50.620 8 191 2.1E-13 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 SMART SM00977 359 430 2.9E-19 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 Pfam PF01171 PP-loop family 17 204 4.7E-53 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 16 208 1.7E-54 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 SUPERFAMILY SSF52402 9 237 1.41E-54 T 22-04-2016 PNUC_RS04475 72b8e192ce0884c3feb8666d77ae22b3 442 PANTHER PTHR11807:SF2 11 411 2.4E-67 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PNUC_RS08365 588e66929d444fe517b2a4f16032ddc5 133 PANTHER PTHR34290 7 118 8.8E-19 T 22-04-2016 PNUC_RS08365 588e66929d444fe517b2a4f16032ddc5 133 Pfam PF04134 Protein of unknown function, DUF393 10 118 1.5E-20 T 22-04-2016 IPR007263 Protein of unknown function DUF393 PNUC_RS05100 f5d937bf14a4d69eb455d72a75ef2058 371 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS05100 f5d937bf14a4d69eb455d72a75ef2058 371 Gene3D G3DSA:3.60.150.10 9 355 5.1E-151 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS05100 f5d937bf14a4d69eb455d72a75ef2058 371 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS05100 f5d937bf14a4d69eb455d72a75ef2058 371 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 6.6E-138 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS05100 f5d937bf14a4d69eb455d72a75ef2058 371 PIRSF PIRSF001456 3 359 1.7E-133 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS05100 f5d937bf14a4d69eb455d72a75ef2058 371 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS05100 f5d937bf14a4d69eb455d72a75ef2058 371 Pfam PF01264 Chorismate synthase 10 345 1.3E-133 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS05100 f5d937bf14a4d69eb455d72a75ef2058 371 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 35.406 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS05100 f5d937bf14a4d69eb455d72a75ef2058 371 SUPERFAMILY SSF103263 4 354 9.03E-142 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS05100 f5d937bf14a4d69eb455d72a75ef2058 371 PANTHER PTHR21085 2 357 9.1E-198 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS07155 bed0db411ca5ce55086123e26816a1e1 209 PIRSF PIRSF036226 1 202 1.3E-61 T 22-04-2016 IPR014602 Uncharacterised conserved protein UCP036226 PNUC_RS07155 bed0db411ca5ce55086123e26816a1e1 209 Pfam PF08768 Domain of unknown function (DUF1794) 22 198 5.0E-21 T 22-04-2016 IPR014878 Domain of unknown function DUF1794 PNUC_RS07155 bed0db411ca5ce55086123e26816a1e1 209 SUPERFAMILY SSF50814 22 198 1.13E-24 T 22-04-2016 IPR011038 Calycin-like PNUC_RS07055 7a6d454cd4e7bf5ac51e32800f220bdc 89 Gene3D G3DSA:2.60.120.10 20 85 5.4E-6 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS07055 7a6d454cd4e7bf5ac51e32800f220bdc 89 SUPERFAMILY SSF51182 9 85 6.99E-6 T 22-04-2016 IPR011051 RmlC-like cupin domain PNUC_RS00905 5bf069d5899e4a5ffbbbd66d021d4610 357 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 353 34.179 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS00905 5bf069d5899e4a5ffbbbd66d021d4610 357 PANTHER PTHR21015 6 349 9.6E-106 T 22-04-2016 PNUC_RS00905 5bf069d5899e4a5ffbbbd66d021d4610 357 SUPERFAMILY SSF53756 5 353 5.56E-116 T 22-04-2016 PNUC_RS00905 5bf069d5899e4a5ffbbbd66d021d4610 357 Gene3D G3DSA:3.40.50.2000 251 333 3.1E-6 T 22-04-2016 PNUC_RS00905 5bf069d5899e4a5ffbbbd66d021d4610 357 Gene3D G3DSA:3.40.50.2000 3 194 1.1E-62 T 22-04-2016 PNUC_RS00905 5bf069d5899e4a5ffbbbd66d021d4610 357 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 183 335 4.5E-34 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS00905 5bf069d5899e4a5ffbbbd66d021d4610 357 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 143 3.7E-33 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS00905 5bf069d5899e4a5ffbbbd66d021d4610 357 PANTHER PTHR21015:SF22 6 349 9.6E-106 T 22-04-2016 PNUC_RS00905 5bf069d5899e4a5ffbbbd66d021d4610 357 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 5 348 9.1E-96 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PNUC_RS04030 a35983213fe2261c4bf7ee92df08a61f 265 PANTHER PTHR10314:SF4 1 51 2.1E-25 T 22-04-2016 PNUC_RS04030 a35983213fe2261c4bf7ee92df08a61f 265 PANTHER PTHR10314:SF4 74 260 2.1E-25 T 22-04-2016 PNUC_RS04030 a35983213fe2261c4bf7ee92df08a61f 265 Gene3D G3DSA:3.20.20.70 3 264 6.9E-104 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS04030 a35983213fe2261c4bf7ee92df08a61f 265 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PNUC_RS04030 a35983213fe2261c4bf7ee92df08a61f 265 SUPERFAMILY SSF51366 1 253 1.7E-90 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PNUC_RS04030 a35983213fe2261c4bf7ee92df08a61f 265 PANTHER PTHR10314 1 51 2.1E-25 T 22-04-2016 PNUC_RS04030 a35983213fe2261c4bf7ee92df08a61f 265 PANTHER PTHR10314 74 260 2.1E-25 T 22-04-2016 PNUC_RS04030 a35983213fe2261c4bf7ee92df08a61f 265 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 2.3E-78 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PNUC_RS04030 a35983213fe2261c4bf7ee92df08a61f 265 Pfam PF00290 Tryptophan synthase alpha chain 8 262 1.7E-88 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PNUC_RS04030 a35983213fe2261c4bf7ee92df08a61f 265 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 35.179 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PNUC_RS10070 372d36db151d7c5fc9ff2ef535587663 156 PANTHER PTHR12029:SF31 1 149 1.9E-67 T 22-04-2016 PNUC_RS10070 372d36db151d7c5fc9ff2ef535587663 156 SUPERFAMILY SSF75217 1 153 1.11E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PNUC_RS10070 372d36db151d7c5fc9ff2ef535587663 156 Gene3D G3DSA:3.40.1280.10 1 155 1.7E-62 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PNUC_RS10070 372d36db151d7c5fc9ff2ef535587663 156 PIRSF PIRSF029256 1 156 6.5E-65 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PNUC_RS10070 372d36db151d7c5fc9ff2ef535587663 156 PANTHER PTHR12029 1 149 1.9E-67 T 22-04-2016 PNUC_RS10070 372d36db151d7c5fc9ff2ef535587663 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 1.1E-60 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PNUC_RS10070 372d36db151d7c5fc9ff2ef535587663 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 32.078 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PNUC_RS10070 372d36db151d7c5fc9ff2ef535587663 156 Pfam PF00588 SpoU rRNA Methylase family 2 144 4.4E-30 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 SUPERFAMILY SSF52540 3 263 2.61E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 SMART SM00382 319 516 2.9E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 SMART SM00382 32 241 1.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 SUPERFAMILY SSF52540 302 538 3.77E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 Gene3D G3DSA:3.40.50.300 2 265 2.9E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 Gene3D G3DSA:3.40.50.300 282 539 7.4E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 518 541 0.48 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 268 0.035 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 PANTHER PTHR24220:SF574 5 424 3.7E-139 T 22-04-2016 PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 Pfam PF00005 ABC transporter 310 467 3.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 Pfam PF00005 ABC transporter 24 187 1.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS06480 6c51394c298f93adb359d343f4336aa2 545 PANTHER PTHR24220 5 424 3.7E-139 T 22-04-2016 PNUC_RS08270 d17f3376b3a007b4bd9576041f5e4b97 342 SUPERFAMILY SSF53756 2 328 1.44E-61 T 22-04-2016 PNUC_RS08270 d17f3376b3a007b4bd9576041f5e4b97 342 Pfam PF13439 Glycosyltransferase Family 4 14 165 3.3E-18 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PNUC_RS08270 d17f3376b3a007b4bd9576041f5e4b97 342 PANTHER PTHR12526 1 331 2.2E-73 T 22-04-2016 PNUC_RS08270 d17f3376b3a007b4bd9576041f5e4b97 342 Pfam PF13692 Glycosyl transferases group 1 180 298 1.2E-18 T 22-04-2016 PNUC_RS08270 d17f3376b3a007b4bd9576041f5e4b97 342 Gene3D G3DSA:3.40.50.2000 174 286 1.9E-17 T 22-04-2016 PNUC_RS08270 d17f3376b3a007b4bd9576041f5e4b97 342 PANTHER PTHR12526:SF363 1 331 2.2E-73 T 22-04-2016 PNUC_RS01175 6539a5cf5965fc088eef1b1bd246849d 321 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 2 320 1.5E-70 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 PNUC_RS01175 6539a5cf5965fc088eef1b1bd246849d 321 PANTHER PTHR21535 1 320 4.9E-93 T 22-04-2016 PNUC_RS01175 6539a5cf5965fc088eef1b1bd246849d 321 SUPERFAMILY SSF144083 255 317 6.15E-18 T 22-04-2016 PNUC_RS01175 6539a5cf5965fc088eef1b1bd246849d 321 Gene3D G3DSA:3.30.460.20 3 127 7.8E-6 T 22-04-2016 PNUC_RS01175 6539a5cf5965fc088eef1b1bd246849d 321 SUPERFAMILY SSF143865 1 259 9.02E-40 T 22-04-2016 PNUC_RS01175 6539a5cf5965fc088eef1b1bd246849d 321 PANTHER PTHR21535:SF37 1 320 4.9E-93 T 22-04-2016 PNUC_RS01175 6539a5cf5965fc088eef1b1bd246849d 321 Gene3D G3DSA:1.20.58.340 244 320 5.6E-24 T 22-04-2016 PNUC_RS01175 6539a5cf5965fc088eef1b1bd246849d 321 Pfam PF01544 CorA-like Mg2+ transporter protein 30 315 3.9E-56 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 Gene3D G3DSA:3.40.190.80 151 258 6.3E-36 T 22-04-2016 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 3.5E-30 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 3.5E-30 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 3.5E-30 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 3.5E-30 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 PANTHER PTHR20854:SF4 1 261 5.4E-104 T 22-04-2016 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 Pfam PF00459 Inositol monophosphatase family 2 255 6.7E-68 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 PANTHER PTHR20854 1 261 5.4E-104 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.6E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 6.6E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 6.6E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.6E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 6.6E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 6.6E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 SUPERFAMILY SSF56655 1 258 4.71E-85 T 22-04-2016 PNUC_RS04440 3806f913805c27089507b63f73c88b43 262 Gene3D G3DSA:3.30.540.10 2 150 6.4E-55 T 22-04-2016 PNUC_RS08070 3ed7820a20ac099953a0ab414a84e51f 308 Pfam PF03466 LysR substrate binding domain 102 299 4.4E-25 T 22-04-2016 IPR005119 LysR, substrate-binding PNUC_RS08070 3ed7820a20ac099953a0ab414a84e51f 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 76 3.8E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS08070 3ed7820a20ac099953a0ab414a84e51f 308 SUPERFAMILY SSF53850 102 303 8.22E-29 T 22-04-2016 PNUC_RS08070 3ed7820a20ac099953a0ab414a84e51f 308 Gene3D G3DSA:1.10.10.10 12 96 1.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08070 3ed7820a20ac099953a0ab414a84e51f 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 2.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS08070 3ed7820a20ac099953a0ab414a84e51f 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 2.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS08070 3ed7820a20ac099953a0ab414a84e51f 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 2.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS08070 3ed7820a20ac099953a0ab414a84e51f 308 Gene3D G3DSA:3.40.190.10 104 181 7.8E-20 T 22-04-2016 PNUC_RS08070 3ed7820a20ac099953a0ab414a84e51f 308 PANTHER PTHR30537 9 299 2.9E-82 T 22-04-2016 PNUC_RS08070 3ed7820a20ac099953a0ab414a84e51f 308 Gene3D G3DSA:3.40.190.10 182 265 2.6E-14 T 22-04-2016 PNUC_RS08070 3ed7820a20ac099953a0ab414a84e51f 308 PANTHER PTHR30537:SF8 9 299 2.9E-82 T 22-04-2016 PNUC_RS08070 3ed7820a20ac099953a0ab414a84e51f 308 SUPERFAMILY SSF46785 11 95 2.61E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS09890 5af4a2adf214d10d4db88afd73dd1d21 190 PANTHER PTHR21485 20 182 4.3E-43 T 22-04-2016 PNUC_RS09890 5af4a2adf214d10d4db88afd73dd1d21 190 PIRSF PIRSF006118 14 189 3.4E-65 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PNUC_RS09890 5af4a2adf214d10d4db88afd73dd1d21 190 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 179 4.4E-48 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PNUC_RS09890 5af4a2adf214d10d4db88afd73dd1d21 190 Pfam PF08282 haloacid dehalogenase-like hydrolase 102 161 7.6E-10 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS09890 5af4a2adf214d10d4db88afd73dd1d21 190 Gene3D G3DSA:3.40.50.1000 17 187 3.7E-45 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS09890 5af4a2adf214d10d4db88afd73dd1d21 190 SUPERFAMILY SSF56784 22 184 1.84E-38 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS06975 54bc5f01823eec03d81b3efaf6bdface 81 SMART SM00899 1 77 2.2E-17 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PNUC_RS06975 54bc5f01823eec03d81b3efaf6bdface 81 SUPERFAMILY SSF50037 5 78 2.24E-13 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal PNUC_RS06975 54bc5f01823eec03d81b3efaf6bdface 81 Pfam PF04023 FeoA domain 1 77 9.6E-15 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PNUC_RS10200 6a316afc591d121997bfaee4a6a23522 162 Pfam PF01467 Cytidylyltransferase-like 33 133 6.2E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PNUC_RS10200 6a316afc591d121997bfaee4a6a23522 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 31 96 2.1E-12 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PNUC_RS10200 6a316afc591d121997bfaee4a6a23522 162 Gene3D G3DSA:3.40.50.620 30 147 2.9E-33 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS10200 6a316afc591d121997bfaee4a6a23522 162 PANTHER PTHR10739 17 162 2.5E-37 T 22-04-2016 PNUC_RS10200 6a316afc591d121997bfaee4a6a23522 162 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 19 161 9.0E-59 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 PNUC_RS10200 6a316afc591d121997bfaee4a6a23522 162 PANTHER PTHR10739:SF26 17 162 2.5E-37 T 22-04-2016 PNUC_RS10200 6a316afc591d121997bfaee4a6a23522 162 SUPERFAMILY SSF52374 29 156 1.28E-21 T 22-04-2016 PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 Hamap MF_00942 Endonuclease III [nth]. 3 209 37.001 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 PANTHER PTHR10359 1 209 1.6E-85 T 22-04-2016 PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 PIRSF PIRSF001435 1 211 1.2E-52 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 SMART SM00278 109 128 0.005 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 Gene3D G3DSA:1.10.1670.10 123 208 9.9E-36 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.8E-10 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 Gene3D G3DSA:1.10.340.30 23 122 1.0E-32 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 PANTHER PTHR10359:SF18 1 209 1.6E-85 T 22-04-2016 PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 4.7E-19 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 SUPERFAMILY SSF48150 3 207 4.71E-70 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.2E-84 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PNUC_RS07835 b4761b0e3a2a930517489c67a9354bf6 218 SMART SM00478 38 185 4.0E-56 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PNUC_RS01520 da2ec4531ab5d25d3f432ee0130026e9 345 Pfam PF01565 FAD binding domain 35 156 4.4E-18 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PNUC_RS01520 da2ec4531ab5d25d3f432ee0130026e9 345 PANTHER PTHR21071 1 344 8.1E-130 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS01520 da2ec4531ab5d25d3f432ee0130026e9 345 SUPERFAMILY SSF56176 20 207 1.14E-39 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PNUC_RS01520 da2ec4531ab5d25d3f432ee0130026e9 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 222 345 3.6E-33 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS01520 da2ec4531ab5d25d3f432ee0130026e9 345 Gene3D G3DSA:3.90.78.10 246 345 3.3E-40 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS01520 da2ec4531ab5d25d3f432ee0130026e9 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 75.299 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS01520 da2ec4531ab5d25d3f432ee0130026e9 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 344 2.8E-70 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS01520 da2ec4531ab5d25d3f432ee0130026e9 345 SUPERFAMILY SSF56194 221 345 3.53E-44 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS01520 da2ec4531ab5d25d3f432ee0130026e9 345 Gene3D G3DSA:3.30.43.10 19 81 1.2E-12 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PNUC_RS01520 da2ec4531ab5d25d3f432ee0130026e9 345 Gene3D G3DSA:3.30.465.10 87 245 3.2E-51 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PNUC_RS01520 da2ec4531ab5d25d3f432ee0130026e9 345 PANTHER PTHR21071:SF6 1 344 8.1E-130 T 22-04-2016 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 SUPERFAMILY SSF46626 299 390 3.3E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 Gene3D G3DSA:1.10.760.10 176 285 3.9E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 Gene3D G3DSA:1.10.760.10 32 134 2.4E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 PANTHER PTHR35008 14 403 3.9E-133 T 22-04-2016 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 PIRSF PIRSF000018 7 406 1.7E-131 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 PANTHER PTHR35008:SF5 14 403 3.9E-133 T 22-04-2016 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 SUPERFAMILY SSF46626 25 153 5.93E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 SUPERFAMILY SSF46626 177 285 1.41E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 302 381 4.7E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 Gene3D G3DSA:1.10.760.10 305 400 1.5E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 PRINTS PR00605 Class IC cytochrome C signature 311 322 8.6E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 PRINTS PR00605 Class IC cytochrome C signature 359 381 8.6E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PNUC_RS02890 dbf5e3ca616889a6ff9435093c457fa2 407 Pfam PF00034 Cytochrome c 35 134 1.5E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS08260 101903c41683418591c4be865aee6fac 255 Pfam PF01553 Acyltransferase 64 179 1.7E-19 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PNUC_RS08260 101903c41683418591c4be865aee6fac 255 Gene3D G3DSA:3.40.1130.10 67 179 1.7E-10 T 22-04-2016 PNUC_RS08260 101903c41683418591c4be865aee6fac 255 SMART SM00563 70 181 8.7E-25 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PNUC_RS08260 101903c41683418591c4be865aee6fac 255 PANTHER PTHR10434:SF8 37 195 4.7E-33 T 22-04-2016 PNUC_RS08260 101903c41683418591c4be865aee6fac 255 SUPERFAMILY SSF69593 50 181 2.09E-25 T 22-04-2016 PNUC_RS08260 101903c41683418591c4be865aee6fac 255 PANTHER PTHR10434 37 195 4.7E-33 T 22-04-2016 PNUC_RS06260 71a421d18dde36512a896c853dce36c1 230 PANTHER PTHR33620 2 230 1.9E-30 T 22-04-2016 PNUC_RS06260 71a421d18dde36512a896c853dce36c1 230 PIRSF PIRSF009467 4 230 1.7E-60 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PNUC_RS06260 71a421d18dde36512a896c853dce36c1 230 Hamap MF_01385 Urease accessory protein UreF [ureF]. 7 230 30.198 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PNUC_RS06260 71a421d18dde36512a896c853dce36c1 230 Pfam PF01730 UreF 39 183 2.3E-37 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PNUC_RS04765 c12e32c8e7cda9f53e81d5d6c6edc13c 225 Pfam PF00814 Glycoprotease family 14 118 6.7E-27 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PNUC_RS04765 c12e32c8e7cda9f53e81d5d6c6edc13c 225 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 10 206 6.9E-44 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 PNUC_RS04765 c12e32c8e7cda9f53e81d5d6c6edc13c 225 PANTHER PTHR11735:SF11 18 121 3.3E-34 T 22-04-2016 PNUC_RS04765 c12e32c8e7cda9f53e81d5d6c6edc13c 225 SUPERFAMILY SSF53067 98 204 7.12E-13 T 22-04-2016 PNUC_RS04765 c12e32c8e7cda9f53e81d5d6c6edc13c 225 Gene3D G3DSA:3.30.420.40 9 118 3.7E-30 T 22-04-2016 PNUC_RS04765 c12e32c8e7cda9f53e81d5d6c6edc13c 225 PANTHER PTHR11735 18 121 3.3E-34 T 22-04-2016 PNUC_RS04765 c12e32c8e7cda9f53e81d5d6c6edc13c 225 SUPERFAMILY SSF53067 9 84 1.36E-19 T 22-04-2016 PNUC_RS03275 074da42958c7a1892bc4ca3f45647e2b 434 PANTHER PTHR28641 9 433 4.1E-117 T 22-04-2016 PNUC_RS03275 074da42958c7a1892bc4ca3f45647e2b 434 Pfam PF05292 Malonyl-CoA decarboxylase (MCD) 59 406 2.1E-130 T 22-04-2016 IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|UniPathway: UPA00340 PNUC_RS03275 074da42958c7a1892bc4ca3f45647e2b 434 PANTHER PTHR28641:SF1 9 433 4.1E-117 T 22-04-2016 PNUC_RS06280 380631394f77116811707cf751d79b55 210 PIRSF PIRSF016919 5 200 5.9E-38 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PNUC_RS06280 380631394f77116811707cf751d79b55 210 Pfam PF04955 HupE / UreJ protein 19 196 1.6E-41 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 Gene3D G3DSA:1.10.1390.10 460 509 9.3E-12 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 Gene3D G3DSA:3.40.50.10490 238 459 2.2E-114 T 22-04-2016 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 Gene3D G3DSA:3.40.50.10490 118 159 2.2E-114 T 22-04-2016 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 Gene3D G3DSA:3.40.50.10490 27 83 2.2E-114 T 22-04-2016 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 PRINTS PR00662 Glucose-6-phosphate isomerase signature 455 468 2.12E-48 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 PRINTS PR00662 Glucose-6-phosphate isomerase signature 441 455 2.12E-48 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 PRINTS PR00662 Glucose-6-phosphate isomerase signature 423 441 2.12E-48 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 PRINTS PR00662 Glucose-6-phosphate isomerase signature 313 334 2.12E-48 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 PRINTS PR00662 Glucose-6-phosphate isomerase signature 236 254 2.12E-48 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 PRINTS PR00662 Glucose-6-phosphate isomerase signature 121 140 2.12E-48 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 455 472 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 240 253 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 27 482 35.403 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 SUPERFAMILY SSF53697 21 507 1.7E-159 T 22-04-2016 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 PANTHER PTHR11469 19 482 1.1E-183 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS05705 a469e63bd8c06cca3173b31e7795e03f 510 Pfam PF00342 Phosphoglucose isomerase 37 487 3.7E-147 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS07130 4da493d56b035dcfe88149eda8465451 245 Gene3D G3DSA:3.40.190.10 199 236 3.1E-13 T 22-04-2016 PNUC_RS07130 4da493d56b035dcfe88149eda8465451 245 Gene3D G3DSA:3.40.190.10 16 102 3.1E-13 T 22-04-2016 PNUC_RS07130 4da493d56b035dcfe88149eda8465451 245 Gene3D G3DSA:3.40.190.10 106 181 2.0E-4 T 22-04-2016 PNUC_RS07130 4da493d56b035dcfe88149eda8465451 245 SMART SM00062 17 240 2.6E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PNUC_RS07130 4da493d56b035dcfe88149eda8465451 245 SUPERFAMILY SSF53850 18 236 1.09E-30 T 22-04-2016 PNUC_RS07130 4da493d56b035dcfe88149eda8465451 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 18 235 1.7E-19 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PNUC_RS00700 6ea239ad4b3ce1de3785bc3e261e79ca 135 SUPERFAMILY SSF101738 3 106 8.76E-43 T 22-04-2016 IPR007481 Stringent starvation protein B PNUC_RS00700 6ea239ad4b3ce1de3785bc3e261e79ca 135 PANTHER PTHR37486 1 135 5.4E-41 T 22-04-2016 PNUC_RS00700 6ea239ad4b3ce1de3785bc3e261e79ca 135 PIRSF PIRSF005276 1 135 6.5E-48 T 22-04-2016 IPR007481 Stringent starvation protein B PNUC_RS00700 6ea239ad4b3ce1de3785bc3e261e79ca 135 Gene3D G3DSA:2.30.30.220 3 106 3.9E-45 T 22-04-2016 IPR007481 Stringent starvation protein B PNUC_RS00700 6ea239ad4b3ce1de3785bc3e261e79ca 135 PANTHER PTHR37486:SF1 1 135 5.4E-41 T 22-04-2016 PNUC_RS00700 6ea239ad4b3ce1de3785bc3e261e79ca 135 Pfam PF04386 Stringent starvation protein B 7 121 6.2E-33 T 22-04-2016 IPR007481 Stringent starvation protein B PNUC_RS04070 9607cc86bf654b0da22a221d7917b3c9 368 Gene3D G3DSA:3.40.50.300 16 238 2.3E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04070 9607cc86bf654b0da22a221d7917b3c9 368 Pfam PF00005 ABC transporter 16 165 1.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS04070 9607cc86bf654b0da22a221d7917b3c9 368 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS04070 9607cc86bf654b0da22a221d7917b3c9 368 PANTHER PTHR24220 22 245 1.2E-79 T 22-04-2016 PNUC_RS04070 9607cc86bf654b0da22a221d7917b3c9 368 SUPERFAMILY SSF52540 19 245 7.93E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04070 9607cc86bf654b0da22a221d7917b3c9 368 SMART SM00382 22 215 1.5E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS04070 9607cc86bf654b0da22a221d7917b3c9 368 SUPERFAMILY SSF50331 242 355 8.08E-8 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PNUC_RS10165 d3a6501552f895e866f45544f47d7b7f 214 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 69 84 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PNUC_RS10165 d3a6501552f895e866f45544f47d7b7f 214 Hamap MF_00013 Octanoyltransferase [lipB]. 2 214 35.666 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PNUC_RS10165 d3a6501552f895e866f45544f47d7b7f 214 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 73 126 3.0E-15 T 22-04-2016 PNUC_RS10165 d3a6501552f895e866f45544f47d7b7f 214 Gene3D G3DSA:3.90.1550.10 2 211 6.6E-64 T 22-04-2016 PNUC_RS10165 d3a6501552f895e866f45544f47d7b7f 214 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 165 9.9E-5 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 PNUC_RS10165 d3a6501552f895e866f45544f47d7b7f 214 PANTHER PTHR10993 8 211 2.0E-58 T 22-04-2016 PNUC_RS10165 d3a6501552f895e866f45544f47d7b7f 214 PIRSF PIRSF016262 2 214 1.1E-53 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PNUC_RS10165 d3a6501552f895e866f45544f47d7b7f 214 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 24 210 4.3E-54 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PNUC_RS10165 d3a6501552f895e866f45544f47d7b7f 214 SUPERFAMILY SSF55681 2 210 6.79E-60 T 22-04-2016 PNUC_RS07520 e844c07fd10eba5835b0dc4ff257a4df 196 Gene3D G3DSA:3.30.420.10 5 149 3.3E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS07520 e844c07fd10eba5835b0dc4ff257a4df 196 Pfam PF01351 Ribonuclease HII 7 187 3.0E-37 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain PNUC_RS07520 e844c07fd10eba5835b0dc4ff257a4df 196 SUPERFAMILY SSF53098 2 193 2.43E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS07520 e844c07fd10eba5835b0dc4ff257a4df 196 PANTHER PTHR10954 1 193 2.7E-74 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 PNUC_RS07520 e844c07fd10eba5835b0dc4ff257a4df 196 Hamap MF_00052_B Ribonuclease HII [rnhB]. 5 188 35.159 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 PNUC_RS00345 bb7ce9b4176314cf3194fc2579ea61c8 275 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.8E-40 T 22-04-2016 PNUC_RS00345 bb7ce9b4176314cf3194fc2579ea61c8 275 PANTHER PTHR11760 2 241 2.1E-132 T 22-04-2016 PNUC_RS00345 bb7ce9b4176314cf3194fc2579ea61c8 275 Gene3D G3DSA:3.30.300.20 17 107 1.4E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PNUC_RS00345 bb7ce9b4176314cf3194fc2579ea61c8 275 Gene3D G3DSA:3.30.1140.32 108 206 1.0E-45 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 PNUC_RS00345 bb7ce9b4176314cf3194fc2579ea61c8 275 SUPERFAMILY SSF54814 2 106 3.14E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PNUC_RS00345 bb7ce9b4176314cf3194fc2579ea61c8 275 Pfam PF07650 KH domain 39 110 4.7E-21 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 PNUC_RS00345 bb7ce9b4176314cf3194fc2579ea61c8 275 SMART SM00322 60 125 1.9E-8 T 22-04-2016 IPR004087 K Homology domain GO:0003676 PNUC_RS00345 bb7ce9b4176314cf3194fc2579ea61c8 275 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.833 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PNUC_RS00345 bb7ce9b4176314cf3194fc2579ea61c8 275 PANTHER PTHR11760:SF19 2 241 2.1E-132 T 22-04-2016 PNUC_RS00345 bb7ce9b4176314cf3194fc2579ea61c8 275 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 4.9E-93 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PNUC_RS00345 bb7ce9b4176314cf3194fc2579ea61c8 275 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site PNUC_RS00345 bb7ce9b4176314cf3194fc2579ea61c8 275 SUPERFAMILY SSF54821 108 206 6.28E-39 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 PNUC_RS10555 74ebcb6e350816a7652b7622827a58f3 214 SMART SM00855 5 161 1.2E-22 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PNUC_RS10555 74ebcb6e350816a7652b7622827a58f3 214 SUPERFAMILY SSF53254 1 207 1.83E-61 T 22-04-2016 IPR029033 Histidine phosphatase superfamily PNUC_RS10555 74ebcb6e350816a7652b7622827a58f3 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 200 5.0E-60 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PNUC_RS10555 74ebcb6e350816a7652b7622827a58f3 214 PANTHER PTHR23029 8 205 5.9E-50 T 22-04-2016 PNUC_RS10555 74ebcb6e350816a7652b7622827a58f3 214 Gene3D G3DSA:3.40.50.1240 1 208 1.4E-61 T 22-04-2016 IPR029033 Histidine phosphatase superfamily PNUC_RS10555 74ebcb6e350816a7652b7622827a58f3 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 PNUC_RS10555 74ebcb6e350816a7652b7622827a58f3 214 PIRSF PIRSF000709 2 199 4.2E-15 T 22-04-2016 PNUC_RS10555 74ebcb6e350816a7652b7622827a58f3 214 PANTHER PTHR23029:SF1 8 205 5.9E-50 T 22-04-2016 PNUC_RS01530 93747adbebf98d41cf01162b1205e4a9 90 Pfam PF12441 CopG antitoxin of type II toxin-antitoxin system 6 84 6.3E-34 T 22-04-2016 IPR022148 CopG antitoxin PNUC_RS08230 3db8c2170afdfc7ce75d7682beb06029 348 Pfam PF01758 Sodium Bile acid symporter family 53 249 2.5E-56 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PNUC_RS08230 3db8c2170afdfc7ce75d7682beb06029 348 PANTHER PTHR10361 2 348 2.2E-146 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PNUC_RS08230 3db8c2170afdfc7ce75d7682beb06029 348 PIRSF PIRSF005508 1 348 1.1E-127 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 PNUC_RS08230 3db8c2170afdfc7ce75d7682beb06029 348 PANTHER PTHR10361:SF31 2 348 2.2E-146 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 PNUC_RS08230 3db8c2170afdfc7ce75d7682beb06029 348 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 8 337 8.6E-127 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 PNUC_RS10225 adbe95d486d67311acf2c6399ec9a871 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 4.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS10225 adbe95d486d67311acf2c6399ec9a871 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS10225 adbe95d486d67311acf2c6399ec9a871 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 4.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS10225 adbe95d486d67311acf2c6399ec9a871 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS10225 adbe95d486d67311acf2c6399ec9a871 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS10225 adbe95d486d67311acf2c6399ec9a871 258 Gene3D G3DSA:3.40.50.720 11 255 3.4E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10225 adbe95d486d67311acf2c6399ec9a871 258 Pfam PF00106 short chain dehydrogenase 12 198 1.3E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS10225 adbe95d486d67311acf2c6399ec9a871 258 SUPERFAMILY SSF51735 8 256 7.44E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10225 adbe95d486d67311acf2c6399ec9a871 258 PANTHER PTHR24322 16 142 3.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS10225 adbe95d486d67311acf2c6399ec9a871 258 PANTHER PTHR24322 158 190 3.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 344 421 4.5E-15 T 22-04-2016 IPR019489 Clp ATPase, C-terminal PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 Gene3D G3DSA:1.10.8.60 343 442 9.9E-36 T 22-04-2016 PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 Pfam PF07724 AAA domain (Cdc48 subfamily) 141 337 1.3E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 Gene3D G3DSA:3.40.50.300 67 109 1.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 Gene3D G3DSA:3.40.50.300 141 282 1.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 Gene3D G3DSA:3.40.50.300 321 338 1.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 SUPERFAMILY SSF52540 131 426 5.25E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 SUPERFAMILY SSF52540 64 105 5.25E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 438 3.8E-202 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 SMART SM00382 140 360 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 7 442 53.007 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 SUPERFAMILY SSF57716 14 49 1.71E-11 T 22-04-2016 PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 PANTHER PTHR11262 2 446 5.4E-246 T 22-04-2016 PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.1E-19 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 SMART SM01086 344 438 8.5E-33 T 22-04-2016 IPR019489 Clp ATPase, C-terminal PNUC_RS04870 c5f61caee7fa43cb1028060d013e5592 453 SMART SM00994 13 52 2.1E-23 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PNUC_RS04705 0aa777ca0a6965cc0e1bcaf76bb575f9 216 Gene3D G3DSA:3.90.550.10 14 209 9.5E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS04705 0aa777ca0a6965cc0e1bcaf76bb575f9 216 SUPERFAMILY SSF53448 14 207 3.96E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS04705 0aa777ca0a6965cc0e1bcaf76bb575f9 216 PANTHER PTHR19136 14 211 6.4E-32 T 22-04-2016 PNUC_RS04705 0aa777ca0a6965cc0e1bcaf76bb575f9 216 PANTHER PTHR19136:SF78 14 211 6.4E-32 T 22-04-2016 PNUC_RS04705 0aa777ca0a6965cc0e1bcaf76bb575f9 216 Pfam PF12804 MobA-like NTP transferase domain 18 172 3.4E-28 T 22-04-2016 IPR025877 MobA-like NTP transferase PNUC_RS06395 7d050ef700e68794816caed60e5341b6 219 Gene3D G3DSA:3.40.30.10 4 97 1.1E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS06395 7d050ef700e68794816caed60e5341b6 219 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 82 5.3E-8 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PNUC_RS06395 7d050ef700e68794816caed60e5341b6 219 SUPERFAMILY SSF47616 86 202 2.92E-20 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS06395 7d050ef700e68794816caed60e5341b6 219 PANTHER PTHR11260 13 200 1.2E-53 T 22-04-2016 PNUC_RS06395 7d050ef700e68794816caed60e5341b6 219 Pfam PF13410 Glutathione S-transferase, C-terminal domain 145 201 1.8E-6 T 22-04-2016 PNUC_RS06395 7d050ef700e68794816caed60e5341b6 219 Gene3D G3DSA:1.20.1050.10 98 208 1.5E-38 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS06395 7d050ef700e68794816caed60e5341b6 219 PANTHER PTHR11260:SF144 13 200 1.2E-53 T 22-04-2016 PNUC_RS06395 7d050ef700e68794816caed60e5341b6 219 SUPERFAMILY SSF52833 8 94 6.28E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS04500 05a68fdca6a8904c6a6e3a369eef45be 113 SUPERFAMILY SSF47413 17 78 1.15E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PNUC_RS04500 05a68fdca6a8904c6a6e3a369eef45be 113 Gene3D G3DSA:1.10.260.40 20 86 6.2E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PNUC_RS04500 05a68fdca6a8904c6a6e3a369eef45be 113 Pfam PF13560 Helix-turn-helix domain 20 71 1.8E-7 T 22-04-2016 PNUC_RS03795 43f96e27ef819b4f8dd4f5c91a950c56 470 SUPERFAMILY SSF53850 55 305 4.7E-31 T 22-04-2016 PNUC_RS03795 43f96e27ef819b4f8dd4f5c91a950c56 470 PANTHER PTHR30024 19 443 1.5E-31 T 22-04-2016 PNUC_RS03795 43f96e27ef819b4f8dd4f5c91a950c56 470 Gene3D G3DSA:3.40.190.10 56 120 1.1E-8 T 22-04-2016 PNUC_RS03795 43f96e27ef819b4f8dd4f5c91a950c56 470 Gene3D G3DSA:3.40.190.10 164 279 6.3E-13 T 22-04-2016 PNUC_RS03795 43f96e27ef819b4f8dd4f5c91a950c56 470 Pfam PF16868 NMT1-like family 61 245 3.4E-16 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family PNUC_RS03795 43f96e27ef819b4f8dd4f5c91a950c56 470 PANTHER PTHR30024:SF13 19 443 1.5E-31 T 22-04-2016 PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 Pfam PF00364 Biotin-requiring enzyme 5 77 3.3E-20 T 22-04-2016 IPR000089 Biotin/lipoyl attachment PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 PANTHER PTHR23151:SF47 3 391 1.6E-206 T 22-04-2016 PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 SUPERFAMILY SSF52777 161 390 1.73E-86 T 22-04-2016 PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 Gene3D G3DSA:3.30.559.10 152 389 4.3E-90 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 161 389 1.1E-78 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 Gene3D G3DSA:2.40.50.100 2 96 4.4E-27 T 22-04-2016 PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 5 390 1.7E-164 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 Gene3D G3DSA:4.10.320.10 105 143 5.9E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 SUPERFAMILY SSF47005 102 141 4.71E-9 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 Pfam PF02817 e3 binding domain 105 138 3.8E-10 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 SUPERFAMILY SSF51230 2 96 4.32E-26 T 22-04-2016 IPR011053 Single hybrid motif PNUC_RS04380 d1529d14ed79ba486fb2498c78bc5dc2 391 PANTHER PTHR23151 3 391 1.6E-206 T 22-04-2016 PNUC_RS06800 adede0207f9aa9cbe76bb86844b250a1 270 SUPERFAMILY SSF54106 59 107 1.12E-6 T 22-04-2016 IPR018392 LysM domain PNUC_RS06800 adede0207f9aa9cbe76bb86844b250a1 270 SUPERFAMILY SSF51261 136 269 5.75E-51 T 22-04-2016 IPR011055 Duplicated hybrid motif PNUC_RS06800 adede0207f9aa9cbe76bb86844b250a1 270 Gene3D G3DSA:3.10.350.10 59 108 1.0E-9 T 22-04-2016 IPR018392 LysM domain PNUC_RS06800 adede0207f9aa9cbe76bb86844b250a1 270 PANTHER PTHR21666 152 270 5.6E-45 T 22-04-2016 PNUC_RS06800 adede0207f9aa9cbe76bb86844b250a1 270 Gene3D G3DSA:2.70.70.10 142 270 6.8E-42 T 22-04-2016 PNUC_RS06800 adede0207f9aa9cbe76bb86844b250a1 270 Pfam PF01476 LysM domain 61 107 1.4E-4 T 22-04-2016 IPR018392 LysM domain PNUC_RS06800 adede0207f9aa9cbe76bb86844b250a1 270 SMART SM00257 60 108 1.1E-4 T 22-04-2016 IPR018392 LysM domain PNUC_RS06800 adede0207f9aa9cbe76bb86844b250a1 270 Pfam PF01551 Peptidase family M23 171 265 5.6E-33 T 22-04-2016 IPR016047 Peptidase M23 PNUC_RS07875 5567ff82ceaa8a7faddaab4b7e8f2030 411 PANTHER PTHR23505 5 396 4.0E-33 T 22-04-2016 PNUC_RS07875 5567ff82ceaa8a7faddaab4b7e8f2030 411 Pfam PF07690 Major Facilitator Superfamily 20 334 1.8E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS07875 5567ff82ceaa8a7faddaab4b7e8f2030 411 Gene3D G3DSA:1.20.1250.20 221 400 6.5E-15 T 22-04-2016 PNUC_RS07875 5567ff82ceaa8a7faddaab4b7e8f2030 411 PANTHER PTHR23505:SF8 5 396 4.0E-33 T 22-04-2016 PNUC_RS07875 5567ff82ceaa8a7faddaab4b7e8f2030 411 SUPERFAMILY SSF103473 7 401 7.32E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS07875 5567ff82ceaa8a7faddaab4b7e8f2030 411 Gene3D G3DSA:1.20.1250.20 26 189 5.6E-24 T 22-04-2016 PNUC_RS02040 237a0b61841d736218b148929a78716c 879 Pfam PF10150 Ribonuclease E/G family 120 389 2.0E-93 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PNUC_RS02040 237a0b61841d736218b148929a78716c 879 PANTHER PTHR30001 1 711 1.5E-302 T 22-04-2016 PNUC_RS02040 237a0b61841d736218b148929a78716c 879 PANTHER PTHR30001:SF1 1 711 1.5E-302 T 22-04-2016 PNUC_RS02040 237a0b61841d736218b148929a78716c 879 SUPERFAMILY SSF50249 39 124 1.61E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02040 237a0b61841d736218b148929a78716c 879 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 1.6E-158 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PNUC_RS02040 237a0b61841d736218b148929a78716c 879 Gene3D G3DSA:2.40.50.140 31 124 3.3E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02040 237a0b61841d736218b148929a78716c 879 Hamap MF_00970 Ribonuclease E [rne]. 1 861 32.766 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 PNUC_RS02040 237a0b61841d736218b148929a78716c 879 Pfam PF00575 S1 RNA binding domain 36 116 1.2E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 PNUC_RS02040 237a0b61841d736218b148929a78716c 879 SMART SM00316 37 118 1.1E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 PNUC_RS04920 fcfa25e4d943cb973aeb32a723119fd6 148 PANTHER PTHR36919 21 146 1.6E-32 T 22-04-2016 PNUC_RS04920 fcfa25e4d943cb973aeb32a723119fd6 148 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 31 146 1.7E-28 T 22-04-2016 IPR019223 Domain of unknown function DUF2147 PNUC_RS04920 fcfa25e4d943cb973aeb32a723119fd6 148 PANTHER PTHR36919:SF1 21 146 1.6E-32 T 22-04-2016 PNUC_RS00740 d6738c41356505eec9e4ad625c1aae86 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 39.216 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PNUC_RS00740 d6738c41356505eec9e4ad625c1aae86 359 Gene3D G3DSA:3.30.160.20 214 288 2.6E-35 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain PNUC_RS00740 d6738c41356505eec9e4ad625c1aae86 359 Gene3D G3DSA:1.20.58.410 7 93 3.1E-13 T 22-04-2016 PNUC_RS00740 d6738c41356505eec9e4ad625c1aae86 359 SUPERFAMILY SSF75620 12 353 1.57E-131 T 22-04-2016 PNUC_RS00740 d6738c41356505eec9e4ad625c1aae86 359 PANTHER PTHR11075:SF9 1 356 9.0E-162 T 22-04-2016 PNUC_RS00740 d6738c41356505eec9e4ad625c1aae86 359 Pfam PF00472 RF-1 domain 214 321 5.3E-42 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PNUC_RS00740 d6738c41356505eec9e4ad625c1aae86 359 Pfam PF03462 PCRF domain 13 203 1.7E-69 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PNUC_RS00740 d6738c41356505eec9e4ad625c1aae86 359 PANTHER PTHR11075 1 356 9.0E-162 T 22-04-2016 PNUC_RS00740 d6738c41356505eec9e4ad625c1aae86 359 SMART SM00937 63 178 1.8E-63 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PNUC_RS00740 d6738c41356505eec9e4ad625c1aae86 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 355 9.7E-157 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PNUC_RS00740 d6738c41356505eec9e4ad625c1aae86 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PNUC_RS08165 a11656e1219e9fa66b9124064ca27c7c 277 PANTHER PTHR30040 5 257 4.7E-42 T 22-04-2016 PNUC_RS08165 a11656e1219e9fa66b9124064ca27c7c 277 Pfam PF02424 ApbE family 9 258 2.5E-40 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 PNUC_RS08165 a11656e1219e9fa66b9124064ca27c7c 277 SUPERFAMILY SSF143631 5 258 4.58E-53 T 22-04-2016 IPR003374 ApbE-like domain PNUC_RS08165 a11656e1219e9fa66b9124064ca27c7c 277 PANTHER PTHR30040:SF2 5 257 4.7E-42 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 PNUC_RS09340 b50a2580f99196653173362640e364db 455 PIRSF PIRSF000204 1 455 7.5E-205 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 PNUC_RS09340 b50a2580f99196653173362640e364db 455 SUPERFAMILY SSF52467 284 455 1.69E-72 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PNUC_RS09340 b50a2580f99196653173362640e364db 455 PANTHER PTHR10160:SF24 1 454 4.2E-226 T 22-04-2016 PNUC_RS09340 b50a2580f99196653173362640e364db 455 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 452 1.7E-187 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 PNUC_RS09340 b50a2580f99196653173362640e364db 455 PANTHER PTHR10160 1 454 4.2E-226 T 22-04-2016 PNUC_RS09340 b50a2580f99196653173362640e364db 455 Gene3D G3DSA:3.40.50.1220 283 455 4.9E-84 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PNUC_RS03270 54ca00f42dbe93f0d8240fe92cdb7887 302 Gene3D G3DSA:3.40.190.10 199 265 6.6E-15 T 22-04-2016 PNUC_RS03270 54ca00f42dbe93f0d8240fe92cdb7887 302 Gene3D G3DSA:1.10.10.10 5 87 2.9E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03270 54ca00f42dbe93f0d8240fe92cdb7887 302 PANTHER PTHR30346:SF0 4 290 7.5E-52 T 22-04-2016 PNUC_RS03270 54ca00f42dbe93f0d8240fe92cdb7887 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 1.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS03270 54ca00f42dbe93f0d8240fe92cdb7887 302 Gene3D G3DSA:3.40.190.10 94 198 1.4E-19 T 22-04-2016 PNUC_RS03270 54ca00f42dbe93f0d8240fe92cdb7887 302 SUPERFAMILY SSF53850 95 287 3.19E-27 T 22-04-2016 PNUC_RS03270 54ca00f42dbe93f0d8240fe92cdb7887 302 Pfam PF03466 LysR substrate binding domain 93 291 1.1E-28 T 22-04-2016 IPR005119 LysR, substrate-binding PNUC_RS03270 54ca00f42dbe93f0d8240fe92cdb7887 302 PANTHER PTHR30346 4 290 7.5E-52 T 22-04-2016 PNUC_RS03270 54ca00f42dbe93f0d8240fe92cdb7887 302 SUPERFAMILY SSF46785 6 85 1.27E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS00595 e505fe2327d54ebe9e86abeea63d83f4 355 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 354 53.635 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 PNUC_RS00595 e505fe2327d54ebe9e86abeea63d83f4 355 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 353 1.4E-88 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 PNUC_RS00595 e505fe2327d54ebe9e86abeea63d83f4 355 PANTHER PTHR11751 3 353 2.9E-106 T 22-04-2016 PNUC_RS00595 e505fe2327d54ebe9e86abeea63d83f4 355 Gene3D G3DSA:3.40.640.10 38 255 1.1E-57 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS00595 e505fe2327d54ebe9e86abeea63d83f4 355 Pfam PF00155 Aminotransferase class I and II 26 350 3.8E-53 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PNUC_RS00595 e505fe2327d54ebe9e86abeea63d83f4 355 Gene3D G3DSA:3.90.1150.10 256 354 1.5E-26 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS00595 e505fe2327d54ebe9e86abeea63d83f4 355 SUPERFAMILY SSF53383 5 354 2.99E-72 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS00595 e505fe2327d54ebe9e86abeea63d83f4 355 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 210 219 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PNUC_RS00595 e505fe2327d54ebe9e86abeea63d83f4 355 PANTHER PTHR11751:SF398 3 353 2.9E-106 T 22-04-2016 PNUC_RS01395 3bcbada2474d86a85037f0917a652adf 174 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 33 165 8.7E-33 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 PNUC_RS01395 3bcbada2474d86a85037f0917a652adf 174 PANTHER PTHR11078 32 170 3.2E-29 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 PNUC_RS01395 3bcbada2474d86a85037f0917a652adf 174 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 31 167 19.757 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 PNUC_RS01395 3bcbada2474d86a85037f0917a652adf 174 Gene3D G3DSA:1.10.940.10 31 168 6.6E-32 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PNUC_RS01395 3bcbada2474d86a85037f0917a652adf 174 Pfam PF01029 NusB family 34 162 1.6E-27 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PNUC_RS01395 3bcbada2474d86a85037f0917a652adf 174 SUPERFAMILY SSF48013 31 167 1.22E-32 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 44.285 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.3E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.3E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.3E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.3E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.3E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 Gene3D G3DSA:3.30.572.10 1 264 5.4E-131 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 86 264 2.2E-95 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 3.0E-37 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 PANTHER PTHR11548 1 264 9.8E-188 T 22-04-2016 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 Pfam PF00303 Thymidylate synthase 3 264 2.8E-120 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PNUC_RS02000 a7a1652d7c53ace7788c1d7db8afe0d8 264 SUPERFAMILY SSF55831 1 264 1.7E-126 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PNUC_RS04630 428fe4282c5943d3c0791a311bdaae62 293 PANTHER PTHR20858:SF17 2 283 5.6E-117 T 22-04-2016 PNUC_RS04630 428fe4282c5943d3c0791a311bdaae62 293 Pfam PF08543 Phosphomethylpyrimidine kinase 21 276 2.7E-85 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 PNUC_RS04630 428fe4282c5943d3c0791a311bdaae62 293 PANTHER PTHR20858 2 283 5.6E-117 T 22-04-2016 PNUC_RS04630 428fe4282c5943d3c0791a311bdaae62 293 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 14 278 5.5E-87 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PNUC_RS04630 428fe4282c5943d3c0791a311bdaae62 293 Gene3D G3DSA:3.40.1190.20 11 280 1.4E-96 T 22-04-2016 IPR029056 Ribokinase-like PNUC_RS04630 428fe4282c5943d3c0791a311bdaae62 293 SUPERFAMILY SSF53613 10 279 6.86E-76 T 22-04-2016 IPR029056 Ribokinase-like PNUC_RS09165 420ef9b7311e27379675bee4c69d1b4d 226 Gene3D G3DSA:3.40.50.1000 81 224 1.1E-47 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS09165 420ef9b7311e27379675bee4c69d1b4d 226 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 196 1.3E-37 T 22-04-2016 PNUC_RS09165 420ef9b7311e27379675bee4c69d1b4d 226 SUPERFAMILY SSF56784 3 217 3.99E-34 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS09165 420ef9b7311e27379675bee4c69d1b4d 226 PANTHER PTHR10000:SF10 3 219 1.8E-47 T 22-04-2016 PNUC_RS09165 420ef9b7311e27379675bee4c69d1b4d 226 PANTHER PTHR10000 3 219 1.8E-47 T 22-04-2016 PNUC_RS09165 420ef9b7311e27379675bee4c69d1b4d 226 Gene3D G3DSA:1.20.1440.100 16 80 8.9E-33 T 22-04-2016 PNUC_RS09165 420ef9b7311e27379675bee4c69d1b4d 226 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 4 209 2.3E-42 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial PNUC_RS09165 420ef9b7311e27379675bee4c69d1b4d 226 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 197 7.1E-23 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PNUC_RS04700 5628f4091d3fe5cb6b94b6bb0de5edd8 319 Pfam PF02625 XdhC and CoxI family 15 83 4.6E-22 T 22-04-2016 IPR003777 XdhC- CoxI PNUC_RS04700 5628f4091d3fe5cb6b94b6bb0de5edd8 319 PANTHER PTHR30388:SF4 5 312 3.2E-78 T 22-04-2016 PNUC_RS04700 5628f4091d3fe5cb6b94b6bb0de5edd8 319 PANTHER PTHR30388 5 312 3.2E-78 T 22-04-2016 PNUC_RS04700 5628f4091d3fe5cb6b94b6bb0de5edd8 319 Gene3D G3DSA:3.40.50.720 164 238 1.1E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS04700 5628f4091d3fe5cb6b94b6bb0de5edd8 319 SUPERFAMILY SSF51735 164 246 1.18E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS04700 5628f4091d3fe5cb6b94b6bb0de5edd8 319 Pfam PF13478 XdhC Rossmann domain 165 306 5.8E-35 T 22-04-2016 IPR027051 XdhC Rossmann domain PNUC_RS05070 5eb7af66c3da04564a7178306695c179 488 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 474 39.379 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 PNUC_RS05070 5eb7af66c3da04564a7178306695c179 488 PANTHER PTHR32057 16 488 6.0E-181 T 22-04-2016 PNUC_RS05070 5eb7af66c3da04564a7178306695c179 488 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 47 457 2.5E-126 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 PNUC_RS08105 6d7ea75f68afbb39fb04e929525c2c9e 154 Gene3D G3DSA:3.30.70.920 57 140 3.1E-31 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PNUC_RS08105 6d7ea75f68afbb39fb04e929525c2c9e 154 PANTHER PTHR30154:SF28 1 152 5.3E-61 T 22-04-2016 PNUC_RS08105 6d7ea75f68afbb39fb04e929525c2c9e 154 PANTHER PTHR30154 1 152 5.3E-61 T 22-04-2016 PNUC_RS08105 6d7ea75f68afbb39fb04e929525c2c9e 154 SUPERFAMILY SSF54909 63 152 1.34E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel PNUC_RS08105 6d7ea75f68afbb39fb04e929525c2c9e 154 Gene3D G3DSA:1.10.10.10 4 55 3.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08105 6d7ea75f68afbb39fb04e929525c2c9e 154 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 8.8E-25 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PNUC_RS08105 6d7ea75f68afbb39fb04e929525c2c9e 154 SUPERFAMILY SSF46785 2 62 3.31E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08105 6d7ea75f68afbb39fb04e929525c2c9e 154 SMART SM00344 3 112 2.0E-46 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PNUC_RS08105 6d7ea75f68afbb39fb04e929525c2c9e 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 1.8E-17 T 22-04-2016 PNUC_RS08105 6d7ea75f68afbb39fb04e929525c2c9e 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 4.1E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PNUC_RS08105 6d7ea75f68afbb39fb04e929525c2c9e 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 4.1E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PNUC_RS08105 6d7ea75f68afbb39fb04e929525c2c9e 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 4.1E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PNUC_RS03125 14e65a705977eef421e7b0e07589ab7e 261 PANTHER PTHR34979 12 261 1.3E-14 T 22-04-2016 PNUC_RS03125 14e65a705977eef421e7b0e07589ab7e 261 Pfam PF03591 AzlC protein 46 182 8.6E-22 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease PNUC_RS10220 5b6b6ddcbc3380d50a04589529d0a2ec 431 Gene3D G3DSA:3.40.50.150 139 418 9.3E-89 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS10220 5b6b6ddcbc3380d50a04589529d0a2ec 431 PANTHER PTHR10108 75 334 8.9E-91 T 22-04-2016 PNUC_RS10220 5b6b6ddcbc3380d50a04589529d0a2ec 431 PANTHER PTHR10108 351 424 8.9E-91 T 22-04-2016 PNUC_RS10220 5b6b6ddcbc3380d50a04589529d0a2ec 431 PIRSF PIRSF003085 21 430 3.9E-120 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 PNUC_RS10220 5b6b6ddcbc3380d50a04589529d0a2ec 431 PANTHER PTHR10108:SF795 75 334 8.9E-91 T 22-04-2016 PNUC_RS10220 5b6b6ddcbc3380d50a04589529d0a2ec 431 PANTHER PTHR10108:SF795 351 424 8.9E-91 T 22-04-2016 PNUC_RS10220 5b6b6ddcbc3380d50a04589529d0a2ec 431 SUPERFAMILY SSF53335 150 418 2.39E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS10220 5b6b6ddcbc3380d50a04589529d0a2ec 431 Pfam PF02353 Mycolic acid cyclopropane synthetase 143 415 1.2E-84 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS06805 8f2cf67e5c28d6d093d330561a788b05 218 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 12 216 5.4E-56 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PNUC_RS06805 8f2cf67e5c28d6d093d330561a788b05 218 SUPERFAMILY SSF53335 22 216 1.21E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS06805 8f2cf67e5c28d6d093d330561a788b05 218 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 138 153 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PNUC_RS06805 8f2cf67e5c28d6d093d330561a788b05 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 13 216 5.7E-52 T 22-04-2016 PNUC_RS06805 8f2cf67e5c28d6d093d330561a788b05 218 Gene3D G3DSA:3.40.50.150 19 215 3.2E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS06805 8f2cf67e5c28d6d093d330561a788b05 218 PANTHER PTHR11579 30 213 5.9E-56 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PNUC_RS02745 a0a94d1a67e1f616209c6a16ae9f5191 448 Pfam PF01523 Putative modulator of DNA gyrase 31 322 3.6E-50 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS02745 a0a94d1a67e1f616209c6a16ae9f5191 448 PANTHER PTHR30624:SF1 1 448 1.1E-133 T 22-04-2016 PNUC_RS02745 a0a94d1a67e1f616209c6a16ae9f5191 448 SUPERFAMILY SSF111283 8 448 2.22E-117 T 22-04-2016 PNUC_RS02745 a0a94d1a67e1f616209c6a16ae9f5191 448 PANTHER PTHR30624 1 448 1.1E-133 T 22-04-2016 PNUC_RS07860 dfcb3da2622109071073a92100fc9842 223 Pfam PF01144 Coenzyme A transferase 10 218 2.6E-64 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS07860 dfcb3da2622109071073a92100fc9842 223 SUPERFAMILY SSF100950 3 219 2.3E-76 T 22-04-2016 PNUC_RS07860 dfcb3da2622109071073a92100fc9842 223 SMART SM00882 6 219 4.8E-77 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS07860 dfcb3da2622109071073a92100fc9842 223 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 2 218 7.9E-105 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 PNUC_RS07860 dfcb3da2622109071073a92100fc9842 223 Gene3D G3DSA:3.40.1080.10 4 217 2.0E-84 T 22-04-2016 PNUC_RS07860 dfcb3da2622109071073a92100fc9842 223 PANTHER PTHR13707 1 219 1.7E-91 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS10785 5a2b7bbf54dcf995abdbdbe6679ca627 621 SUPERFAMILY SSF53795 248 620 2.75E-145 T 22-04-2016 PNUC_RS10785 5a2b7bbf54dcf995abdbdbe6679ca627 621 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 272 280 - T 22-04-2016 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 PNUC_RS10785 5a2b7bbf54dcf995abdbdbe6679ca627 621 PIRSF PIRSF001348 1 621 1.8E-272 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 PNUC_RS10785 5a2b7bbf54dcf995abdbdbe6679ca627 621 SUPERFAMILY SSF68923 12 247 1.1E-100 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PNUC_RS10785 5a2b7bbf54dcf995abdbdbe6679ca627 621 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 13 620 49.594 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 PNUC_RS10785 5a2b7bbf54dcf995abdbdbe6679ca627 621 Pfam PF00821 Phosphoenolpyruvate carboxykinase 24 619 2.3E-273 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 PNUC_RS10785 5a2b7bbf54dcf995abdbdbe6679ca627 621 Gene3D G3DSA:3.40.449.10 11 247 3.5E-100 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PNUC_RS10785 5a2b7bbf54dcf995abdbdbe6679ca627 621 Gene3D G3DSA:3.90.228.20 248 324 5.4E-27 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PNUC_RS10785 5a2b7bbf54dcf995abdbdbe6679ca627 621 Gene3D G3DSA:3.90.228.20 344 620 1.3E-92 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PNUC_RS10785 5a2b7bbf54dcf995abdbdbe6679ca627 621 PANTHER PTHR11561 18 621 0.0 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 Gene3D G3DSA:3.40.1500.10 5 302 3.1E-129 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 SUPERFAMILY SSF102886 5 302 3.4E-131 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 PANTHER PTHR10755 9 303 8.3E-166 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 Pfam PF01218 Coproporphyrinogen III oxidase 7 302 2.1E-125 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 PRINTS PR00073 Coprogen oxidase signature 262 288 5.1E-65 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 PRINTS PR00073 Coprogen oxidase signature 162 191 5.1E-65 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 PRINTS PR00073 Coprogen oxidase signature 125 147 5.1E-65 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 PRINTS PR00073 Coprogen oxidase signature 27 43 5.1E-65 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 PRINTS PR00073 Coprogen oxidase signature 90 114 5.1E-65 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 PRINTS PR00073 Coprogen oxidase signature 234 261 5.1E-65 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 277 52.324 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03215 f40313b75d8f9e6cfa2afc2fff5816b8 303 PIRSF PIRSF000166 2 303 3.4E-123 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 SUPERFAMILY SSF51735 137 303 2.16E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.1E-46 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 SUPERFAMILY SSF52283 305 360 5.53E-63 T 22-04-2016 PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 SUPERFAMILY SSF52283 1 137 5.53E-63 T 22-04-2016 PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 SMART SM01003 4 137 9.3E-73 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.5E-153 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 Gene3D G3DSA:3.40.50.720 178 198 6.3E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 PANTHER PTHR10160 1 370 1.8E-195 T 22-04-2016 PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 22-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 4.2E-82 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 PIRSF PIRSF000183 1 371 7.9E-154 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 SMART SM01002 149 297 8.2E-89 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 Gene3D G3DSA:3.40.50.1770 199 357 8.0E-32 T 22-04-2016 PNUC_RS03470 6b3372b7c2ee20cdab022863338f8bdb 372 Gene3D G3DSA:3.40.50.1770 1 177 1.7E-59 T 22-04-2016 PNUC_RS04145 9e18467751cae59f306c9321b30342cc 238 Gene3D G3DSA:2.60.120.10 22 150 8.7E-22 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS04145 9e18467751cae59f306c9321b30342cc 238 SUPERFAMILY SSF46785 161 234 1.48E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS04145 9e18467751cae59f306c9321b30342cc 238 Gene3D G3DSA:1.10.10.10 161 234 8.1E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS04145 9e18467751cae59f306c9321b30342cc 238 SUPERFAMILY SSF51206 19 153 3.27E-26 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like PNUC_RS04145 9e18467751cae59f306c9321b30342cc 238 Pfam PF00027 Cyclic nucleotide-binding domain 47 123 3.0E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain PNUC_RS04145 9e18467751cae59f306c9321b30342cc 238 SMART SM00100 26 146 1.9E-8 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain PNUC_RS04145 9e18467751cae59f306c9321b30342cc 238 Pfam PF13545 Crp-like helix-turn-helix domain 164 232 4.3E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PNUC_RS04145 9e18467751cae59f306c9321b30342cc 238 PANTHER PTHR24567 20 235 2.4E-33 T 22-04-2016 PNUC_RS04145 9e18467751cae59f306c9321b30342cc 238 PANTHER PTHR24567:SF32 20 235 2.4E-33 T 22-04-2016 PNUC_RS04025 a9603dbec233f9be361ce77d9a160afe 397 PANTHER PTHR10314:SF3 9 392 5.1E-230 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PNUC_RS04025 a9603dbec233f9be361ce77d9a160afe 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 380 1.9E-49 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PNUC_RS04025 a9603dbec233f9be361ce77d9a160afe 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 393 52.539 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PNUC_RS04025 a9603dbec233f9be361ce77d9a160afe 397 PIRSF PIRSF001413 2 397 1.0E-163 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PNUC_RS04025 a9603dbec233f9be361ce77d9a160afe 397 SUPERFAMILY SSF53686 5 390 1.44E-151 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PNUC_RS04025 a9603dbec233f9be361ce77d9a160afe 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PNUC_RS04025 a9603dbec233f9be361ce77d9a160afe 397 Gene3D G3DSA:3.40.50.1100 180 393 6.8E-99 T 22-04-2016 PNUC_RS04025 a9603dbec233f9be361ce77d9a160afe 397 PANTHER PTHR10314 9 392 5.1E-230 T 22-04-2016 PNUC_RS04025 a9603dbec233f9be361ce77d9a160afe 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 392 1.5E-190 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PNUC_RS04025 a9603dbec233f9be361ce77d9a160afe 397 Gene3D G3DSA:3.40.50.1100 100 179 3.7E-21 T 22-04-2016 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PANTHER PTHR12428:SF14 178 549 6.1E-102 T 22-04-2016 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 369 3.5E-88 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 Pfam PF02096 60Kd inner membrane protein 371 549 1.4E-60 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PRINTS PR01900 YidC translocation/secretion protein signature 504 528 1.5E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PRINTS PR01900 YidC translocation/secretion protein signature 356 372 1.5E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PRINTS PR01900 YidC translocation/secretion protein signature 485 500 1.5E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 370 549 5.5E-71 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 551 23.57 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 Pfam PF14849 YidC periplasmic domain 83 360 1.4E-63 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PRINTS PR00701 60kDa inner membrane protein signature 479 501 6.8E-67 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PRINTS PR00701 60kDa inner membrane protein signature 341 361 6.8E-67 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PRINTS PR00701 60kDa inner membrane protein signature 432 455 6.8E-67 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PRINTS PR00701 60kDa inner membrane protein signature 268 283 6.8E-67 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PRINTS PR00701 60kDa inner membrane protein signature 515 538 6.8E-67 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.8E-67 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PRINTS PR00701 60kDa inner membrane protein signature 171 191 6.8E-67 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PRINTS PR00701 60kDa inner membrane protein signature 87 108 6.8E-67 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS10795 36976d6503b515c3cdcd0d0f32182bee 557 PANTHER PTHR12428 178 549 6.1E-102 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PNUC_RS04895 edec42530a565246a6d7da20ef09304d 224 PANTHER PTHR24220 9 224 2.0E-91 T 22-04-2016 PNUC_RS04895 edec42530a565246a6d7da20ef09304d 224 SUPERFAMILY SSF52540 8 223 1.73E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04895 edec42530a565246a6d7da20ef09304d 224 SMART SM00382 36 222 7.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS04895 edec42530a565246a6d7da20ef09304d 224 Gene3D G3DSA:3.40.50.300 7 223 1.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04895 edec42530a565246a6d7da20ef09304d 224 Pfam PF00005 ABC transporter 27 173 5.6E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS04895 edec42530a565246a6d7da20ef09304d 224 PANTHER PTHR24220:SF509 9 224 2.0E-91 T 22-04-2016 PNUC_RS04895 edec42530a565246a6d7da20ef09304d 224 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS05835 537a794c4ddbb73d50e387fb744e44a3 101 Gene3D G3DSA:3.30.70.1060 1 89 1.6E-22 T 22-04-2016 PNUC_RS05835 537a794c4ddbb73d50e387fb744e44a3 101 Pfam PF03795 YCII-related domain 1 87 9.1E-15 T 22-04-2016 IPR005545 YCII-related PNUC_RS05835 537a794c4ddbb73d50e387fb744e44a3 101 SUPERFAMILY SSF54909 1 88 6.43E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel PNUC_RS05835 537a794c4ddbb73d50e387fb744e44a3 101 PANTHER PTHR33606 1 87 1.0E-13 T 22-04-2016 PNUC_RS05160 5824683671adfe7f2b64c08e5dbaef84 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 113 4.7E-22 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PNUC_RS05160 5824683671adfe7f2b64c08e5dbaef84 222 PANTHER PTHR30614 17 222 7.9E-87 T 22-04-2016 PNUC_RS05160 5824683671adfe7f2b64c08e5dbaef84 222 PANTHER PTHR30614:SF1 17 222 7.9E-87 T 22-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 PNUC_RS05160 5824683671adfe7f2b64c08e5dbaef84 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 218 1.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS05160 5824683671adfe7f2b64c08e5dbaef84 222 SUPERFAMILY SSF161098 16 212 1.7E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS05160 5824683671adfe7f2b64c08e5dbaef84 222 Gene3D G3DSA:1.10.3720.10 17 218 8.2E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS00475 ff82edae6a1551eca9266a70bc673714 221 SUPERFAMILY SSF52540 20 215 1.29E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00475 ff82edae6a1551eca9266a70bc673714 221 Pfam PF01926 50S ribosome-binding GTPase 26 148 2.4E-18 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS00475 ff82edae6a1551eca9266a70bc673714 221 Gene3D G3DSA:3.40.50.300 20 209 1.7E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00475 ff82edae6a1551eca9266a70bc673714 221 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 204 9.3E-63 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 PNUC_RS00475 ff82edae6a1551eca9266a70bc673714 221 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 9 209 26.279 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 PNUC_RS00475 ff82edae6a1551eca9266a70bc673714 221 PANTHER PTHR11649 20 218 1.7E-41 T 22-04-2016 PNUC_RS02515 07b219509c69ccb37ebce5f614ceef83 325 Gene3D G3DSA:3.40.50.720 5 118 1.3E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02515 07b219509c69ccb37ebce5f614ceef83 325 Gene3D G3DSA:3.40.50.720 119 292 1.7E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02515 07b219509c69ccb37ebce5f614ceef83 325 SUPERFAMILY SSF51735 111 291 2.89E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02515 07b219509c69ccb37ebce5f614ceef83 325 PANTHER PTHR10996:SF127 1 323 6.5E-85 T 22-04-2016 PNUC_RS02515 07b219509c69ccb37ebce5f614ceef83 325 SUPERFAMILY SSF52283 7 130 2.98E-17 T 22-04-2016 PNUC_RS02515 07b219509c69ccb37ebce5f614ceef83 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 31 322 7.9E-9 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PNUC_RS02515 07b219509c69ccb37ebce5f614ceef83 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 291 1.0E-48 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PNUC_RS02515 07b219509c69ccb37ebce5f614ceef83 325 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 180 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PNUC_RS02515 07b219509c69ccb37ebce5f614ceef83 325 PANTHER PTHR10996 1 323 6.5E-85 T 22-04-2016 PNUC_RS01420 dea46a987ef0b8f59789e312196a0f51 169 Pfam PF12019 Type II transport protein GspH 31 132 1.7E-5 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PNUC_RS01420 dea46a987ef0b8f59789e312196a0f51 169 SUPERFAMILY SSF54523 1 79 1.96E-7 T 22-04-2016 PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 Hamap MF_01183 Chaperone SurA [surA]. 11 475 28.137 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 Pfam PF09312 SurA N-terminal domain 45 158 4.7E-27 T 22-04-2016 IPR015391 SurA N-terminal PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 PANTHER PTHR10657 5 304 4.3E-59 T 22-04-2016 PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 PANTHER PTHR10657 324 472 4.3E-59 T 22-04-2016 PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 Pfam PF13616 PPIC-type PPIASE domain 332 430 4.6E-25 T 22-04-2016 PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 Pfam PF13616 PPIC-type PPIASE domain 198 302 7.1E-9 T 22-04-2016 PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 369 389 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 SUPERFAMILY SSF54534 332 432 1.83E-31 T 22-04-2016 PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 Gene3D G3DSA:3.10.50.40 331 453 2.0E-37 T 22-04-2016 PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 Gene3D G3DSA:3.10.50.40 196 304 2.4E-16 T 22-04-2016 PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 SUPERFAMILY SSF54534 198 303 3.6E-13 T 22-04-2016 PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 SUPERFAMILY SSF109998 45 228 1.14E-33 T 22-04-2016 IPR027304 Trigger factor/SurA domain PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 PANTHER PTHR10657:SF16 5 304 4.3E-59 T 22-04-2016 PNUC_RS09695 609baa63bcbf00fb4cad92e9d6bac5e0 484 PANTHER PTHR10657:SF16 324 472 4.3E-59 T 22-04-2016 PNUC_RS10480 1898ff59d304d8d185027e4921abdb09 94 SUPERFAMILY SSF47729 1 91 3.97E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PNUC_RS10480 1898ff59d304d8d185027e4921abdb09 94 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.9E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS10480 1898ff59d304d8d185027e4921abdb09 94 PANTHER PTHR33175 1 90 3.9E-36 T 22-04-2016 PNUC_RS10480 1898ff59d304d8d185027e4921abdb09 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PNUC_RS10480 1898ff59d304d8d185027e4921abdb09 94 Gene3D G3DSA:4.10.520.10 1 91 5.3E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PNUC_RS10480 1898ff59d304d8d185027e4921abdb09 94 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 9.0E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS10480 1898ff59d304d8d185027e4921abdb09 94 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 9.0E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS10480 1898ff59d304d8d185027e4921abdb09 94 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 9.0E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS10480 1898ff59d304d8d185027e4921abdb09 94 SMART SM00411 1 90 2.3E-37 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PNUC_RS10270 18aad85c5a4cee24183d692c90275fc3 327 Gene3D G3DSA:3.90.180.10 16 139 4.5E-11 T 22-04-2016 IPR011032 GroES-like PNUC_RS10270 18aad85c5a4cee24183d692c90275fc3 327 Pfam PF00107 Zinc-binding dehydrogenase 159 271 9.7E-16 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PNUC_RS10270 18aad85c5a4cee24183d692c90275fc3 327 SUPERFAMILY SSF50129 2 145 1.83E-43 T 22-04-2016 IPR011032 GroES-like PNUC_RS10270 18aad85c5a4cee24183d692c90275fc3 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 5.1E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PNUC_RS10270 18aad85c5a4cee24183d692c90275fc3 327 SUPERFAMILY SSF51735 118 286 6.94E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10270 18aad85c5a4cee24183d692c90275fc3 327 PANTHER PTHR11695 16 327 1.3E-144 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PNUC_RS10270 18aad85c5a4cee24183d692c90275fc3 327 PANTHER PTHR11695:SF13 16 327 1.3E-144 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI PNUC_RS10270 18aad85c5a4cee24183d692c90275fc3 327 Gene3D G3DSA:3.40.50.720 140 292 2.3E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10270 18aad85c5a4cee24183d692c90275fc3 327 SMART SM00829 13 323 3.2E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PNUC_RS10270 18aad85c5a4cee24183d692c90275fc3 327 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 325 3.0E-133 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI PNUC_RS06885 b02274e0d127a27a21e4f661e6f64aa3 196 PANTHER PTHR40593 42 196 2.2E-26 T 22-04-2016 PNUC_RS06885 b02274e0d127a27a21e4f661e6f64aa3 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 11 192 5.7E-42 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB PNUC_RS06885 b02274e0d127a27a21e4f661e6f64aa3 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 16 190 1.9E-54 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB PNUC_RS01180 57cfbc2085bbf91c9be9f25a822a70b6 164 Gene3D G3DSA:3.90.950.20 5 163 1.2E-56 T 22-04-2016 IPR008136 CinA, C-terminal PNUC_RS01180 57cfbc2085bbf91c9be9f25a822a70b6 164 SUPERFAMILY SSF142433 6 163 1.01E-53 T 22-04-2016 IPR008136 CinA, C-terminal PNUC_RS01180 57cfbc2085bbf91c9be9f25a822a70b6 164 PANTHER PTHR13939 10 163 1.6E-64 T 22-04-2016 PNUC_RS01180 57cfbc2085bbf91c9be9f25a822a70b6 164 Pfam PF02464 Competence-damaged protein 10 161 2.9E-56 T 22-04-2016 IPR008136 CinA, C-terminal PNUC_RS01180 57cfbc2085bbf91c9be9f25a822a70b6 164 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 160 7.9E-47 T 22-04-2016 IPR008136 CinA, C-terminal PNUC_RS04290 052c7205bbc780f3a34081b05b5c61b2 233 SMART SM00882 5 217 3.6E-90 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS04290 052c7205bbc780f3a34081b05b5c61b2 233 SUPERFAMILY SSF100950 2 227 1.56E-86 T 22-04-2016 PNUC_RS04290 052c7205bbc780f3a34081b05b5c61b2 233 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 216 2.8E-78 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 PNUC_RS04290 052c7205bbc780f3a34081b05b5c61b2 233 PANTHER PTHR13707 1 231 1.3E-134 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS04290 052c7205bbc780f3a34081b05b5c61b2 233 Pfam PF01144 Coenzyme A transferase 7 216 3.0E-78 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS04290 052c7205bbc780f3a34081b05b5c61b2 233 Gene3D G3DSA:3.40.1080.10 2 215 3.1E-98 T 22-04-2016 PNUC_RS05580 87b825421b4e34c52f786d1b81590b74 261 PANTHER PTHR24319 1 261 5.4E-61 T 22-04-2016 PNUC_RS05580 87b825421b4e34c52f786d1b81590b74 261 Gene3D G3DSA:3.40.50.720 4 257 8.5E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS05580 87b825421b4e34c52f786d1b81590b74 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.4E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS05580 87b825421b4e34c52f786d1b81590b74 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.4E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS05580 87b825421b4e34c52f786d1b81590b74 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.4E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS05580 87b825421b4e34c52f786d1b81590b74 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 3.4E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS05580 87b825421b4e34c52f786d1b81590b74 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.4E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS05580 87b825421b4e34c52f786d1b81590b74 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.4E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS05580 87b825421b4e34c52f786d1b81590b74 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 256 1.7E-46 T 22-04-2016 PNUC_RS05580 87b825421b4e34c52f786d1b81590b74 261 SUPERFAMILY SSF51735 6 257 1.65E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS05580 87b825421b4e34c52f786d1b81590b74 261 PANTHER PTHR24319:SF23 1 261 5.4E-61 T 22-04-2016 PNUC_RS10790 3927779386768e311196882daf12be70 457 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 457 31.166 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 PNUC_RS10790 3927779386768e311196882daf12be70 457 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 124 9.2E-33 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal PNUC_RS10790 3927779386768e311196882daf12be70 457 Gene3D G3DSA:3.40.50.300 202 250 2.8E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS10790 3927779386768e311196882daf12be70 457 PANTHER PTHR11649:SF56 9 457 2.0E-137 T 22-04-2016 PNUC_RS10790 3927779386768e311196882daf12be70 457 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 457 7.7E-98 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 PNUC_RS10790 3927779386768e311196882daf12be70 457 SUPERFAMILY SSF52540 201 374 1.91E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS10790 3927779386768e311196882daf12be70 457 SUPERFAMILY SSF52540 73 167 1.91E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS10790 3927779386768e311196882daf12be70 457 Gene3D G3DSA:1.20.120.430 251 275 1.2E-51 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 PNUC_RS10790 3927779386768e311196882daf12be70 457 Gene3D G3DSA:1.20.120.430 126 186 1.2E-51 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 PNUC_RS10790 3927779386768e311196882daf12be70 457 Gene3D G3DSA:1.20.120.430 386 457 1.2E-51 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 PNUC_RS10790 3927779386768e311196882daf12be70 457 PANTHER PTHR11649 9 457 2.0E-137 T 22-04-2016 PNUC_RS10790 3927779386768e311196882daf12be70 457 Gene3D G3DSA:3.30.1360.120 2 125 7.0E-38 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PNUC_RS10790 3927779386768e311196882daf12be70 457 Pfam PF01926 50S ribosome-binding GTPase 223 337 4.7E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS10790 3927779386768e311196882daf12be70 457 Pfam PF12631 MnmE helical domain 127 454 9.0E-57 T 22-04-2016 IPR025867 MnmE, helical domain PNUC_RS10790 3927779386768e311196882daf12be70 457 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 221 372 5.9E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PNUC_RS10790 3927779386768e311196882daf12be70 457 Gene3D G3DSA:3.40.50.300 290 377 3.9E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS10790 3927779386768e311196882daf12be70 457 SUPERFAMILY SSF116878 126 224 4.58E-46 T 22-04-2016 PNUC_RS10790 3927779386768e311196882daf12be70 457 SUPERFAMILY SSF116878 381 457 4.58E-46 T 22-04-2016 PNUC_RS01150 e515fbf98d2648f14f968696d1c52bd8 676 PANTHER PTHR23355 249 587 2.6E-44 T 22-04-2016 PNUC_RS01150 e515fbf98d2648f14f968696d1c52bd8 676 Pfam PF00773 RNB domain 249 489 1.4E-33 T 22-04-2016 PNUC_RS01150 e515fbf98d2648f14f968696d1c52bd8 676 Pfam PF00773 RNB domain 496 535 9.8E-10 T 22-04-2016 PNUC_RS01150 e515fbf98d2648f14f968696d1c52bd8 676 SUPERFAMILY SSF50249 248 587 1.03E-70 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS01150 e515fbf98d2648f14f968696d1c52bd8 676 SMART SM00955 244 538 3.5E-65 T 22-04-2016 PNUC_RS01150 e515fbf98d2648f14f968696d1c52bd8 676 ProSitePatterns PS01175 Ribonuclease II family signature. 505 529 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site PNUC_RS01150 e515fbf98d2648f14f968696d1c52bd8 676 PANTHER PTHR23355:SF5 249 587 2.6E-44 T 22-04-2016 PNUC_RS10285 3c01903fe40db020ee30ac141af27318 219 PANTHER PTHR11260 1 202 1.1E-50 T 22-04-2016 PNUC_RS10285 3c01903fe40db020ee30ac141af27318 219 SUPERFAMILY SSF47616 75 212 2.92E-17 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS10285 3c01903fe40db020ee30ac141af27318 219 Gene3D G3DSA:1.20.1050.10 86 212 2.1E-18 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS10285 3c01903fe40db020ee30ac141af27318 219 SUPERFAMILY SSF52833 1 87 3.57E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS10285 3c01903fe40db020ee30ac141af27318 219 Pfam PF13410 Glutathione S-transferase, C-terminal domain 131 199 1.2E-6 T 22-04-2016 PNUC_RS10285 3c01903fe40db020ee30ac141af27318 219 Gene3D G3DSA:3.40.30.10 1 85 4.1E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS10285 3c01903fe40db020ee30ac141af27318 219 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 78 8.1E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PNUC_RS10285 3c01903fe40db020ee30ac141af27318 219 PANTHER PTHR11260:SF157 1 202 1.1E-50 T 22-04-2016 PNUC_RS08120 b4b44e1cffcd7a336529ab5f0785b1e5 350 Pfam PF16113 Enoyl-CoA hydratase/isomerase 14 344 3.3E-117 T 22-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 PNUC_RS08120 b4b44e1cffcd7a336529ab5f0785b1e5 350 PANTHER PTHR11941:SF53 2 186 1.2E-113 T 22-04-2016 PNUC_RS08120 b4b44e1cffcd7a336529ab5f0785b1e5 350 PANTHER PTHR11941:SF53 251 328 1.2E-113 T 22-04-2016 PNUC_RS08120 b4b44e1cffcd7a336529ab5f0785b1e5 350 SUPERFAMILY SSF52096 3 186 2.11E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS08120 b4b44e1cffcd7a336529ab5f0785b1e5 350 SUPERFAMILY SSF52096 255 344 2.11E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS08120 b4b44e1cffcd7a336529ab5f0785b1e5 350 Gene3D G3DSA:3.90.226.10 260 328 3.2E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS08120 b4b44e1cffcd7a336529ab5f0785b1e5 350 Gene3D G3DSA:3.90.226.10 2 197 3.2E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS08120 b4b44e1cffcd7a336529ab5f0785b1e5 350 PANTHER PTHR11941 2 186 1.2E-113 T 22-04-2016 PNUC_RS08120 b4b44e1cffcd7a336529ab5f0785b1e5 350 PANTHER PTHR11941 251 328 1.2E-113 T 22-04-2016 PNUC_RS01915 07b0b13a2af69e3d07ea288b8e05a598 115 SUPERFAMILY SSF54534 2 114 5.7E-40 T 22-04-2016 PNUC_RS01915 07b0b13a2af69e3d07ea288b8e05a598 115 Gene3D G3DSA:3.10.50.40 2 114 1.1E-44 T 22-04-2016 PNUC_RS01915 07b0b13a2af69e3d07ea288b8e05a598 115 PANTHER PTHR10516 2 114 9.6E-53 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PNUC_RS01915 07b0b13a2af69e3d07ea288b8e05a598 115 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 15 111 5.5E-35 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PNUC_RS04585 a0a64f8273ff5cbf1e08bf0a5e77c905 172 Pfam PF00156 Phosphoribosyl transferase domain 27 148 7.0E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PNUC_RS04585 a0a64f8273ff5cbf1e08bf0a5e77c905 172 PANTHER PTHR32315 10 160 7.4E-55 T 22-04-2016 PNUC_RS04585 a0a64f8273ff5cbf1e08bf0a5e77c905 172 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 172 29.589 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 PNUC_RS04585 a0a64f8273ff5cbf1e08bf0a5e77c905 172 Gene3D G3DSA:3.40.50.2020 3 170 1.0E-50 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS04585 a0a64f8273ff5cbf1e08bf0a5e77c905 172 SUPERFAMILY SSF53271 4 170 4.33E-43 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS00615 8840fe7e815efbade8ccd7ab69a449fb 252 Gene3D G3DSA:3.20.20.70 4 252 2.4E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS00615 8840fe7e815efbade8ccd7ab69a449fb 252 PANTHER PTHR21235 2 252 1.4E-123 T 22-04-2016 PNUC_RS00615 8840fe7e815efbade8ccd7ab69a449fb 252 Pfam PF00977 Histidine biosynthesis protein 5 235 5.3E-89 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 PNUC_RS00615 8840fe7e815efbade8ccd7ab69a449fb 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 251 3.9E-114 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 PNUC_RS00615 8840fe7e815efbade8ccd7ab69a449fb 252 SUPERFAMILY SSF51366 2 251 4.95E-83 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PNUC_RS00615 8840fe7e815efbade8ccd7ab69a449fb 252 PANTHER PTHR21235:SF2 2 252 1.4E-123 T 22-04-2016 PNUC_RS00615 8840fe7e815efbade8ccd7ab69a449fb 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 48.784 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 PNUC_RS05335 93305b334a5154da62aa3bd1cae98cb9 477 SUPERFAMILY SSF53955 98 258 1.55E-39 T 22-04-2016 IPR023346 Lysozyme-like domain PNUC_RS05335 93305b334a5154da62aa3bd1cae98cb9 477 Pfam PF01464 Transglycosylase SLT domain 108 206 1.5E-23 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 PNUC_RS05335 93305b334a5154da62aa3bd1cae98cb9 477 Gene3D G3DSA:1.10.530.10 95 256 7.3E-47 T 22-04-2016 PNUC_RS05335 93305b334a5154da62aa3bd1cae98cb9 477 PANTHER PTHR21666 52 378 8.6E-88 T 22-04-2016 PNUC_RS05335 93305b334a5154da62aa3bd1cae98cb9 477 PANTHER PTHR21666:SF206 52 378 8.6E-88 T 22-04-2016 PNUC_RS09005 f148b3748c1d1f30f38db445693e33bb 148 Gene3D G3DSA:3.10.50.40 130 147 4.1E-10 T 22-04-2016 PNUC_RS09005 f148b3748c1d1f30f38db445693e33bb 148 Gene3D G3DSA:3.10.50.40 6 72 4.1E-10 T 22-04-2016 PNUC_RS09005 f148b3748c1d1f30f38db445693e33bb 148 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 9 76 5.8E-5 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PNUC_RS09005 f148b3748c1d1f30f38db445693e33bb 148 SUPERFAMILY SSF54534 7 147 9.82E-24 T 22-04-2016 PNUC_RS03060 806703c5880521c90ba5d6a6a6480bcc 86 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 5.8E-20 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 PNUC_RS03060 806703c5880521c90ba5d6a6a6480bcc 86 SUPERFAMILY SSF50249 1 71 1.4E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS03060 806703c5880521c90ba5d6a6a6480bcc 86 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 74 24.884 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PNUC_RS03060 806703c5880521c90ba5d6a6a6480bcc 86 Gene3D G3DSA:2.40.50.140 1 71 3.5E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS03060 806703c5880521c90ba5d6a6a6480bcc 86 PANTHER PTHR33370 1 83 1.7E-34 T 22-04-2016 PNUC_RS03060 806703c5880521c90ba5d6a6a6480bcc 86 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 6.8E-29 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PNUC_RS03100 7b4ec4e508ac68b3e2df004cfaa88171 299 PIRSF PIRSF000103 1 295 2.0E-74 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PNUC_RS03100 7b4ec4e508ac68b3e2df004cfaa88171 299 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 163 2.3E-49 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PNUC_RS03100 7b4ec4e508ac68b3e2df004cfaa88171 299 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 8 21 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 PNUC_RS03100 7b4ec4e508ac68b3e2df004cfaa88171 299 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 286 3.6E-38 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PNUC_RS03100 7b4ec4e508ac68b3e2df004cfaa88171 299 SUPERFAMILY SSF51735 4 164 1.11E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03100 7b4ec4e508ac68b3e2df004cfaa88171 299 SUPERFAMILY SSF48179 164 293 5.89E-38 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS03100 7b4ec4e508ac68b3e2df004cfaa88171 299 PANTHER PTHR22981 1 299 7.1E-132 T 22-04-2016 PNUC_RS03100 7b4ec4e508ac68b3e2df004cfaa88171 299 Gene3D G3DSA:1.10.1040.10 166 293 2.2E-41 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PNUC_RS03100 7b4ec4e508ac68b3e2df004cfaa88171 299 Gene3D G3DSA:3.40.50.720 2 164 2.4E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03100 7b4ec4e508ac68b3e2df004cfaa88171 299 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 5 294 1.6E-124 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 PNUC_RS03100 7b4ec4e508ac68b3e2df004cfaa88171 299 PANTHER PTHR22981:SF70 1 299 7.1E-132 T 22-04-2016 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 178 2.8E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 6 660 43.504 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 Gene3D G3DSA:3.30.565.10 19 223 1.1E-68 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 ProSitePatterns PS00177 DNA topoisomerase II signature. 435 443 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PANTHER PTHR10169 6 662 0.0 T 22-04-2016 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 588 652 5.3E-23 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PANTHER PTHR10169:SF45 6 662 0.0 T 22-04-2016 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 Pfam PF00204 DNA gyrase B 254 404 8.3E-32 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 SUPERFAMILY SSF55874 9 223 1.2E-58 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 SMART SM00387 31 181 1.5E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 Gene3D G3DSA:3.40.50.670 417 642 2.0E-75 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 SUPERFAMILY SSF54211 226 406 3.41E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR00418 DNA topoisomerase II family signature 433 447 1.45E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.45E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.45E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR00418 DNA topoisomerase II family signature 502 518 1.45E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR00418 DNA topoisomerase II family signature 520 537 1.45E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR00418 DNA topoisomerase II family signature 592 608 1.45E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR00418 DNA topoisomerase II family signature 540 552 1.45E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR00418 DNA topoisomerase II family signature 116 130 1.45E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR00418 DNA topoisomerase II family signature 285 298 1.45E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 SUPERFAMILY SSF56719 407 654 3.66E-73 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR01098 Topoisomerase IV subunit B signature 142 156 3.4E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR01098 Topoisomerase IV subunit B signature 467 488 3.4E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR01098 Topoisomerase IV subunit B signature 381 406 3.4E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR01098 Topoisomerase IV subunit B signature 30 43 3.4E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR01098 Topoisomerase IV subunit B signature 200 221 3.4E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR01098 Topoisomerase IV subunit B signature 357 380 3.4E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 PRINTS PR01098 Topoisomerase IV subunit B signature 182 199 3.4E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 SMART SM00433 37 656 2.8E-189 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 Gene3D G3DSA:3.30.230.10 226 406 1.4E-36 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PNUC_RS04690 be314a8674c79089451a8fcc96e27737 662 Pfam PF01751 Toprim domain 432 546 5.0E-12 T 22-04-2016 IPR006171 Toprim domain PNUC_RS05855 799049237d0392261ad92da341bdd2b9 116 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 49 110 4.4E-11 T 22-04-2016 PNUC_RS05855 799049237d0392261ad92da341bdd2b9 116 SUPERFAMILY SSF55166 14 111 2.43E-15 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain PNUC_RS10430 a84033e8b80c859e3a89e705398bc655 333 PANTHER PTHR30349:SF17 8 329 1.7E-98 T 22-04-2016 PNUC_RS10430 a84033e8b80c859e3a89e705398bc655 333 Gene3D G3DSA:1.10.443.10 128 322 1.5E-48 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS10430 a84033e8b80c859e3a89e705398bc655 333 Pfam PF00589 Phage integrase family 144 314 6.4E-35 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS10430 a84033e8b80c859e3a89e705398bc655 333 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 13 92 1.2E-17 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PNUC_RS10430 a84033e8b80c859e3a89e705398bc655 333 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 328 32.241 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD PNUC_RS10430 a84033e8b80c859e3a89e705398bc655 333 PANTHER PTHR30349 8 329 1.7E-98 T 22-04-2016 PNUC_RS10430 a84033e8b80c859e3a89e705398bc655 333 SUPERFAMILY SSF56349 124 326 5.89E-44 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PNUC_RS10430 a84033e8b80c859e3a89e705398bc655 333 SUPERFAMILY SSF47823 10 98 1.59E-15 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal PNUC_RS10430 a84033e8b80c859e3a89e705398bc655 333 Gene3D G3DSA:1.10.150.130 9 97 1.0E-20 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal PNUC_RS09885 65767978550d962691b38454bfb9c851 330 SMART SM00116 281 329 0.0014 T 22-04-2016 IPR000644 CBS domain PNUC_RS09885 65767978550d962691b38454bfb9c851 330 SMART SM00116 216 264 2.2 T 22-04-2016 IPR000644 CBS domain PNUC_RS09885 65767978550d962691b38454bfb9c851 330 Pfam PF00571 CBS domain 279 327 1.8E-7 T 22-04-2016 IPR000644 CBS domain PNUC_RS09885 65767978550d962691b38454bfb9c851 330 Pfam PF00571 CBS domain 207 264 1.9E-5 T 22-04-2016 IPR000644 CBS domain PNUC_RS09885 65767978550d962691b38454bfb9c851 330 Gene3D G3DSA:3.40.50.10490 13 200 3.2E-52 T 22-04-2016 PNUC_RS09885 65767978550d962691b38454bfb9c851 330 PANTHER PTHR38418:SF1 7 203 4.0E-39 T 22-04-2016 PNUC_RS09885 65767978550d962691b38454bfb9c851 330 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 51 320 4.3E-111 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 PNUC_RS09885 65767978550d962691b38454bfb9c851 330 PANTHER PTHR38418 7 203 4.0E-39 T 22-04-2016 PNUC_RS09885 65767978550d962691b38454bfb9c851 330 PIRSF PIRSF004692 1 330 6.6E-128 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 PNUC_RS09885 65767978550d962691b38454bfb9c851 330 SUPERFAMILY SSF53697 9 328 1.6E-68 T 22-04-2016 PNUC_RS09885 65767978550d962691b38454bfb9c851 330 Gene3D G3DSA:3.10.580.10 201 325 3.8E-36 T 22-04-2016 PNUC_RS09885 65767978550d962691b38454bfb9c851 330 Pfam PF01380 SIS domain 46 177 4.5E-34 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 PANTHER PTHR32282:SF5 20 347 3.8E-235 T 22-04-2016 PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 PANTHER PTHR32282:SF5 452 758 3.8E-235 T 22-04-2016 PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 Pfam PF00912 Transglycosylase 94 266 3.1E-62 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 Pfam PF17092 Penicillin-binding protein OB-like domain 353 456 1.3E-21 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 Pfam PF00905 Penicillin binding protein transpeptidase domain 459 709 4.7E-39 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 SUPERFAMILY SSF56601 453 769 1.88E-122 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 SUPERFAMILY SSF56601 248 270 1.88E-122 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 SUPERFAMILY SSF56601 299 350 1.88E-122 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 Gene3D G3DSA:1.10.3810.10 94 268 3.4E-73 T 22-04-2016 PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 SUPERFAMILY SSF53955 80 288 1.35E-73 T 22-04-2016 IPR023346 Lysozyme-like domain PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 103 743 1.1E-185 T 22-04-2016 PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 Gene3D G3DSA:3.40.710.10 269 350 6.2E-130 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 Gene3D G3DSA:3.40.710.10 453 763 6.2E-130 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 PANTHER PTHR32282 20 347 3.8E-235 T 22-04-2016 PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 PANTHER PTHR32282 452 758 3.8E-235 T 22-04-2016 PNUC_RS00515 51b2039c3e9f9f1458df1298bbb102da 778 Gene3D G3DSA:2.40.50.140 384 452 1.5E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 Gene3D G3DSA:3.30.360.10 149 299 4.4E-58 T 22-04-2016 PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 Gene3D G3DSA:3.40.50.720 1 148 1.2E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 PIRSF PIRSF000098 1 435 2.2E-162 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 PANTHER PTHR21499 4 361 4.4E-129 T 22-04-2016 PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 SUPERFAMILY SSF51735 1 158 2.55E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 Pfam PF01842 ACT domain 354 420 4.0E-12 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 SUPERFAMILY SSF55021 353 423 2.46E-11 T 22-04-2016 PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 Pfam PF00742 Homoserine dehydrogenase 137 315 2.9E-64 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 SUPERFAMILY SSF55347 137 302 1.05E-52 T 22-04-2016 PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 6.6E-20 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 Gene3D G3DSA:3.30.70.260 353 423 8.9E-11 T 22-04-2016 PNUC_RS02300 597ad25543390362af9263ec0f3b1a43 436 PANTHER PTHR21499:SF2 4 361 4.4E-129 T 22-04-2016 PNUC_RS02655 2a128cb9e787c2ec22a0f2a92fe37fa4 422 Gene3D G3DSA:1.10.530.10 252 378 5.1E-50 T 22-04-2016 PNUC_RS02655 2a128cb9e787c2ec22a0f2a92fe37fa4 422 Gene3D G3DSA:1.10.530.10 90 146 5.1E-50 T 22-04-2016 PNUC_RS02655 2a128cb9e787c2ec22a0f2a92fe37fa4 422 PANTHER PTHR30163:SF0 92 195 2.3E-75 T 22-04-2016 PNUC_RS02655 2a128cb9e787c2ec22a0f2a92fe37fa4 422 PANTHER PTHR30163:SF0 214 389 2.3E-75 T 22-04-2016 PNUC_RS02655 2a128cb9e787c2ec22a0f2a92fe37fa4 422 SUPERFAMILY SSF53955 55 377 1.22E-60 T 22-04-2016 IPR023346 Lysozyme-like domain PNUC_RS02655 2a128cb9e787c2ec22a0f2a92fe37fa4 422 Pfam PF13406 Transglycosylase SLT domain 46 375 3.9E-85 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 PNUC_RS02655 2a128cb9e787c2ec22a0f2a92fe37fa4 422 PANTHER PTHR30163 92 195 2.3E-75 T 22-04-2016 IPR011757 Lytic transglycosylase MltB PNUC_RS02655 2a128cb9e787c2ec22a0f2a92fe37fa4 422 PANTHER PTHR30163 214 389 2.3E-75 T 22-04-2016 IPR011757 Lytic transglycosylase MltB PNUC_RS01255 b28b17ace02ac0471c8203eb66c6e00c 141 Pfam PF03653 Uncharacterised protein family (UPF0093) 1 141 1.2E-42 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 PNUC_RS01255 b28b17ace02ac0471c8203eb66c6e00c 141 PANTHER PTHR40255 3 141 6.7E-36 T 22-04-2016 PNUC_RS01255 b28b17ace02ac0471c8203eb66c6e00c 141 PIRSF PIRSF004638 1 141 4.8E-46 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 PNUC_RS02530 9ac678e4b6cc4c723a11f98fe18392ed 256 PANTHER PTHR22778:SF21 7 256 2.2E-62 T 22-04-2016 PNUC_RS02530 9ac678e4b6cc4c723a11f98fe18392ed 256 PANTHER PTHR22778 7 256 2.2E-62 T 22-04-2016 PNUC_RS02530 9ac678e4b6cc4c723a11f98fe18392ed 256 Gene3D G3DSA:3.40.250.10 105 230 6.9E-24 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS02530 9ac678e4b6cc4c723a11f98fe18392ed 256 SMART SM00450 116 220 1.4E-9 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS02530 9ac678e4b6cc4c723a11f98fe18392ed 256 SUPERFAMILY SSF52821 100 235 1.23E-22 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS02530 9ac678e4b6cc4c723a11f98fe18392ed 256 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 256 33.347 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 PNUC_RS00070 fc60e98b13079fbf340b16e9b48f17b6 254 PANTHER PTHR30269:SF0 1 254 2.2E-74 T 22-04-2016 PNUC_RS00070 fc60e98b13079fbf340b16e9b48f17b6 254 Pfam PF01925 Sulfite exporter TauE/SafE 7 245 4.0E-43 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS00070 fc60e98b13079fbf340b16e9b48f17b6 254 PANTHER PTHR30269 1 254 2.2E-74 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 PANTHER PTHR11922 2 532 2.0E-277 T 22-04-2016 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 Pfam PF02540 NAD synthase 221 295 1.5E-7 T 22-04-2016 IPR022310 NAD/GMP synthase PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 216 535 1.9E-145 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 Pfam PF00958 GMP synthase C terminal domain 443 534 3.2E-43 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 PANTHER PTHR11922:SF2 2 532 2.0E-277 T 22-04-2016 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 SUPERFAMILY SSF52402 200 421 1.52E-59 T 22-04-2016 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 208 5.6E-68 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 SUPERFAMILY SSF54810 408 535 7.45E-47 T 22-04-2016 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 PRINTS PR00097 Anthranilate synthase component II signature 180 193 3.5E-5 T 22-04-2016 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 PRINTS PR00097 Anthranilate synthase component II signature 80 91 3.5E-5 T 22-04-2016 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 PRINTS PR00097 Anthranilate synthase component II signature 53 62 3.5E-5 T 22-04-2016 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 Gene3D G3DSA:3.40.50.620 227 402 1.1E-57 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 SUPERFAMILY SSF52317 2 240 2.93E-51 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 PRINTS PR00096 Glutamine amidotransferase superfamily signature 180 193 1.2E-6 T 22-04-2016 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 1.2E-6 T 22-04-2016 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 1.2E-6 T 22-04-2016 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 Pfam PF00117 Glutamine amidotransferase class-I 7 203 2.6E-36 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 Gene3D G3DSA:3.30.300.10 404 535 1.0E-52 T 22-04-2016 PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 Gene3D G3DSA:3.40.50.880 3 226 6.5E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS07445 a1c9c0b6336cb0c11417f1e2a7e83a6e 535 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 535 55.055 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PNUC_RS10505 82650dd0c8c79263459bfa70e5cec5bd 299 PIRSF PIRSF026649 2 295 2.8E-68 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PNUC_RS10505 82650dd0c8c79263459bfa70e5cec5bd 299 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 285 5.4E-54 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PNUC_RS10505 82650dd0c8c79263459bfa70e5cec5bd 299 PANTHER PTHR30606 10 296 7.5E-63 T 22-04-2016 PNUC_RS10505 82650dd0c8c79263459bfa70e5cec5bd 299 PANTHER PTHR30606:SF5 10 296 7.5E-63 T 22-04-2016 PNUC_RS07580 b200911efe1d36feec228074a2c6062a 236 PANTHER PTHR21499 4 234 2.2E-107 T 22-04-2016 PNUC_RS07580 b200911efe1d36feec228074a2c6062a 236 PANTHER PTHR21499:SF23 4 234 2.2E-107 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PNUC_RS07580 b200911efe1d36feec228074a2c6062a 236 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 235 43.552 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PNUC_RS07580 b200911efe1d36feec228074a2c6062a 236 Gene3D G3DSA:3.40.1160.10 3 235 3.3E-83 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS07580 b200911efe1d36feec228074a2c6062a 236 PIRSF PIRSF005650 1 236 1.5E-89 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PNUC_RS07580 b200911efe1d36feec228074a2c6062a 236 SUPERFAMILY SSF53633 3 235 4.32E-69 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS07580 b200911efe1d36feec228074a2c6062a 236 Pfam PF00696 Amino acid kinase family 5 214 3.6E-26 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS07580 b200911efe1d36feec228074a2c6062a 236 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 4 235 1.8E-99 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PNUC_RS03735 dd560e7d1979b909ad3588913daaec47 335 SUPERFAMILY SSF51679 6 327 3.77E-86 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PNUC_RS03735 dd560e7d1979b909ad3588913daaec47 335 Gene3D G3DSA:3.20.20.30 3 327 1.0E-89 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PNUC_RS03735 dd560e7d1979b909ad3588913daaec47 335 PANTHER PTHR30137 1 332 3.9E-136 T 22-04-2016 PNUC_RS03735 dd560e7d1979b909ad3588913daaec47 335 PANTHER PTHR30137:SF2 1 332 3.9E-136 T 22-04-2016 PNUC_RS03735 dd560e7d1979b909ad3588913daaec47 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 328 1.4E-130 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 PNUC_RS03735 dd560e7d1979b909ad3588913daaec47 335 Pfam PF00296 Luciferase-like monooxygenase 23 304 5.1E-37 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PNUC_RS02100 4705a1a45f92a0eb5087610a4b365886 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site PNUC_RS02100 4705a1a45f92a0eb5087610a4b365886 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 2.8E-34 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PNUC_RS02100 4705a1a45f92a0eb5087610a4b365886 79 SUPERFAMILY SSF47336 2 76 1.96E-22 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain PNUC_RS02100 4705a1a45f92a0eb5087610a4b365886 79 Pfam PF00550 Phosphopantetheine attachment site 6 67 1.2E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain PNUC_RS02100 4705a1a45f92a0eb5087610a4b365886 79 Gene3D G3DSA:1.10.1200.10 3 76 4.2E-34 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain PNUC_RS02100 4705a1a45f92a0eb5087610a4b365886 79 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0052 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PNUC_RS02100 4705a1a45f92a0eb5087610a4b365886 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 75 1.0E-10 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PNUC_RS02100 4705a1a45f92a0eb5087610a4b365886 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.801 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PNUC_RS02100 4705a1a45f92a0eb5087610a4b365886 79 PANTHER PTHR20863 4 73 1.3E-29 T 22-04-2016 PNUC_RS07050 4bc46eb976518a31d03e52f10d98535d 354 SUPERFAMILY SSF56042 169 344 2.69E-45 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS07050 4bc46eb976518a31d03e52f10d98535d 354 Hamap MF_00625 Selenide, water dikinase [selD]. 9 353 42.668 T 22-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PNUC_RS07050 4bc46eb976518a31d03e52f10d98535d 354 PIRSF PIRSF036407 4 354 6.0E-116 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PNUC_RS07050 4bc46eb976518a31d03e52f10d98535d 354 Gene3D G3DSA:3.90.650.10 169 352 4.1E-16 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS07050 4bc46eb976518a31d03e52f10d98535d 354 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 350 4.4E-29 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS07050 4bc46eb976518a31d03e52f10d98535d 354 Gene3D G3DSA:3.30.1330.10 41 166 8.0E-32 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PNUC_RS07050 4bc46eb976518a31d03e52f10d98535d 354 SUPERFAMILY SSF55326 11 166 1.7E-40 T 22-04-2016 PNUC_RS07050 4bc46eb976518a31d03e52f10d98535d 354 Pfam PF00586 AIR synthase related protein, N-terminal domain 54 161 4.4E-21 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PNUC_RS07050 4bc46eb976518a31d03e52f10d98535d 354 PANTHER PTHR10256 11 330 1.5E-113 T 22-04-2016 PNUC_RS07050 4bc46eb976518a31d03e52f10d98535d 354 TIGRFAM TIGR00476 selD: selenide, water dikinase 11 320 1.2E-128 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PNUC_RS00650 8581998c0d13d138a8cbfde292147c94 481 Gene3D G3DSA:1.25.40.10 12 49 2.8E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS00650 8581998c0d13d138a8cbfde292147c94 481 Gene3D G3DSA:1.25.40.10 104 127 2.8E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS00650 8581998c0d13d138a8cbfde292147c94 481 Gene3D G3DSA:1.25.40.10 199 343 2.8E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS00650 8581998c0d13d138a8cbfde292147c94 481 SUPERFAMILY SSF81901 200 332 1.12E-11 T 22-04-2016 PNUC_RS09815 0b7efe4b39ae425d3bb9b0bb1649be7d 217 Pfam PF04367 Protein of unknown function (DUF502) 64 169 2.8E-33 T 22-04-2016 IPR007462 Protein of unknown function DUF502 PNUC_RS09815 0b7efe4b39ae425d3bb9b0bb1649be7d 217 PANTHER PTHR31876 1 206 9.9E-47 T 22-04-2016 PNUC_RS09815 0b7efe4b39ae425d3bb9b0bb1649be7d 217 PANTHER PTHR31876:SF1 1 206 9.9E-47 T 22-04-2016 PNUC_RS04445 447e0cfca832179ffe9f95649b337067 262 SUPERFAMILY SSF56300 9 218 2.15E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS04445 447e0cfca832179ffe9f95649b337067 262 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 8 233 8.3E-70 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 PNUC_RS04445 447e0cfca832179ffe9f95649b337067 262 PANTHER PTHR34990 7 233 4.4E-71 T 22-04-2016 PNUC_RS04445 447e0cfca832179ffe9f95649b337067 262 PANTHER PTHR34990:SF1 7 233 4.4E-71 T 22-04-2016 PNUC_RS04445 447e0cfca832179ffe9f95649b337067 262 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 262 98.181 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 PNUC_RS04445 447e0cfca832179ffe9f95649b337067 262 Pfam PF00149 Calcineurin-like phosphoesterase 9 211 8.1E-9 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PNUC_RS04445 447e0cfca832179ffe9f95649b337067 262 Gene3D G3DSA:3.60.21.10 9 131 1.2E-17 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS04445 447e0cfca832179ffe9f95649b337067 262 Gene3D G3DSA:3.60.21.10 186 232 1.2E-17 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS10495 5c54a43faed881d1b70b6860f313985e 98 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 6.0E-21 T 22-04-2016 IPR003746 Protein of unknown function DUF167 PNUC_RS10495 5c54a43faed881d1b70b6860f313985e 98 Hamap MF_00634 UPF0235 protein YggU [yggU]. 9 98 16.663 T 22-04-2016 IPR003746 Protein of unknown function DUF167 PNUC_RS10495 5c54a43faed881d1b70b6860f313985e 98 SUPERFAMILY SSF69786 2 96 5.1E-24 T 22-04-2016 IPR003746 Protein of unknown function DUF167 PNUC_RS10495 5c54a43faed881d1b70b6860f313985e 98 PANTHER PTHR13420 8 97 1.2E-17 T 22-04-2016 PNUC_RS10495 5c54a43faed881d1b70b6860f313985e 98 SMART SM01152 9 85 7.5E-29 T 22-04-2016 IPR003746 Protein of unknown function DUF167 PNUC_RS10495 5c54a43faed881d1b70b6860f313985e 98 Gene3D G3DSA:3.30.1200.10 2 95 2.5E-23 T 22-04-2016 IPR003746 Protein of unknown function DUF167 PNUC_RS01005 ae5030480a2272fd80c036622301098f 429 Pfam PF01595 Domain of unknown function DUF21 16 188 9.6E-43 T 22-04-2016 IPR002550 Domain of unknown function DUF21 PNUC_RS01005 ae5030480a2272fd80c036622301098f 429 SUPERFAMILY SSF56176 345 426 1.8E-17 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PNUC_RS01005 ae5030480a2272fd80c036622301098f 429 Pfam PF00571 CBS domain 209 266 4.6E-4 T 22-04-2016 IPR000644 CBS domain PNUC_RS01005 ae5030480a2272fd80c036622301098f 429 Pfam PF00571 CBS domain 282 329 7.2E-5 T 22-04-2016 IPR000644 CBS domain PNUC_RS01005 ae5030480a2272fd80c036622301098f 429 PANTHER PTHR22777 1 420 4.9E-113 T 22-04-2016 PNUC_RS01005 ae5030480a2272fd80c036622301098f 429 Gene3D G3DSA:3.10.580.10 197 322 1.1E-17 T 22-04-2016 PNUC_RS01005 ae5030480a2272fd80c036622301098f 429 Pfam PF03471 Transporter associated domain 347 420 3.1E-15 T 22-04-2016 IPR005170 Transporter-associated domain PNUC_RS01005 ae5030480a2272fd80c036622301098f 429 Gene3D G3DSA:3.30.465.10 323 420 2.4E-19 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PNUC_RS01005 ae5030480a2272fd80c036622301098f 429 SMART SM01091 345 423 5.8E-20 T 22-04-2016 IPR005170 Transporter-associated domain PNUC_RS01005 ae5030480a2272fd80c036622301098f 429 SUPERFAMILY SSF54631 200 338 3.07E-25 T 22-04-2016 PNUC_RS07970 512621c965e24362aeaf7782f71cc3e3 326 PANTHER PTHR11695 18 326 1.8E-106 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PNUC_RS07970 512621c965e24362aeaf7782f71cc3e3 326 Pfam PF00107 Zinc-binding dehydrogenase 153 256 6.1E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PNUC_RS07970 512621c965e24362aeaf7782f71cc3e3 326 SUPERFAMILY SSF50129 5 151 4.09E-36 T 22-04-2016 IPR011032 GroES-like PNUC_RS07970 512621c965e24362aeaf7782f71cc3e3 326 SMART SM00829 13 324 4.5E-17 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PNUC_RS07970 512621c965e24362aeaf7782f71cc3e3 326 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PNUC_RS07970 512621c965e24362aeaf7782f71cc3e3 326 PANTHER PTHR11695:SF605 18 326 1.8E-106 T 22-04-2016 PNUC_RS07970 512621c965e24362aeaf7782f71cc3e3 326 Gene3D G3DSA:3.90.180.10 5 146 1.6E-42 T 22-04-2016 IPR011032 GroES-like PNUC_RS07970 512621c965e24362aeaf7782f71cc3e3 326 Gene3D G3DSA:3.40.50.720 147 258 6.0E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS07970 512621c965e24362aeaf7782f71cc3e3 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 89 1.4E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PNUC_RS07970 512621c965e24362aeaf7782f71cc3e3 326 SUPERFAMILY SSF51735 114 266 7.43E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS00605 e8799dffe8702ab9d8e1352baa5c010b 220 PANTHER PTHR21235 2 220 3.6E-76 T 22-04-2016 PNUC_RS00605 e8799dffe8702ab9d8e1352baa5c010b 220 PANTHER PTHR21235:SF1 2 220 3.6E-76 T 22-04-2016 PNUC_RS00605 e8799dffe8702ab9d8e1352baa5c010b 220 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 218 34.843 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 PNUC_RS00605 e8799dffe8702ab9d8e1352baa5c010b 220 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 217 8.9E-61 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 PNUC_RS00605 e8799dffe8702ab9d8e1352baa5c010b 220 SUPERFAMILY SSF52317 4 218 4.59E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS00605 e8799dffe8702ab9d8e1352baa5c010b 220 Gene3D G3DSA:3.40.50.880 3 218 2.2E-75 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS00605 e8799dffe8702ab9d8e1352baa5c010b 220 PIRSF PIRSF000495 3 220 1.7E-66 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 PNUC_RS00605 e8799dffe8702ab9d8e1352baa5c010b 220 Pfam PF00117 Glutamine amidotransferase class-I 7 206 2.0E-17 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PNUC_RS02285 37b9042412c8347c265af18dc614888d 564 PANTHER PTHR33908:SF3 17 413 2.6E-87 T 22-04-2016 PNUC_RS02285 37b9042412c8347c265af18dc614888d 564 PANTHER PTHR33908 17 413 2.6E-87 T 22-04-2016 PNUC_RS02285 37b9042412c8347c265af18dc614888d 564 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 71 232 3.5E-19 T 22-04-2016 PNUC_RS10045 1695fd00d67396f410b139f7852391b5 193 Gene3D G3DSA:2.60.370.10 63 186 5.1E-44 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain PNUC_RS10045 1695fd00d67396f410b139f7852391b5 193 PANTHER PTHR21320:SF3 8 179 1.2E-27 T 22-04-2016 PNUC_RS10045 1695fd00d67396f410b139f7852391b5 193 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 178 1.5E-45 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 PNUC_RS10045 1695fd00d67396f410b139f7852391b5 193 PIRSF PIRSF005413 1 193 6.8E-58 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 PNUC_RS10045 1695fd00d67396f410b139f7852391b5 193 PANTHER PTHR21320 8 179 1.2E-27 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 PNUC_RS10045 1695fd00d67396f410b139f7852391b5 193 SUPERFAMILY SSF110111 63 180 2.75E-41 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain PNUC_RS07460 72c7160224755a79d2c2b529759ca402 143 PANTHER PTHR12901:SF7 1 143 5.4E-43 T 22-04-2016 PNUC_RS07460 72c7160224755a79d2c2b529759ca402 143 SUPERFAMILY SSF55961 1 143 5.71E-32 T 22-04-2016 PNUC_RS07460 72c7160224755a79d2c2b529759ca402 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 12 134 5.2E-27 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain PNUC_RS07460 72c7160224755a79d2c2b529759ca402 143 PANTHER PTHR12901 1 143 5.4E-43 T 22-04-2016 PNUC_RS07460 72c7160224755a79d2c2b529759ca402 143 Gene3D G3DSA:3.30.530.20 2 143 1.0E-40 T 22-04-2016 IPR023393 START-like domain PNUC_RS08310 850e32a54ddd649a83d10859f83f83c9 158 PRINTS PR01837 MgtC/SapB protein signature 64 86 4.2E-34 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PNUC_RS08310 850e32a54ddd649a83d10859f83f83c9 158 PRINTS PR01837 MgtC/SapB protein signature 93 117 4.2E-34 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PNUC_RS08310 850e32a54ddd649a83d10859f83f83c9 158 PRINTS PR01837 MgtC/SapB protein signature 17 36 4.2E-34 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PNUC_RS08310 850e32a54ddd649a83d10859f83f83c9 158 PRINTS PR01837 MgtC/SapB protein signature 36 54 4.2E-34 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PNUC_RS08310 850e32a54ddd649a83d10859f83f83c9 158 PANTHER PTHR33778 1 156 2.8E-39 T 22-04-2016 PNUC_RS08310 850e32a54ddd649a83d10859f83f83c9 158 Pfam PF02308 MgtC family 14 139 1.1E-34 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 Pfam PF00684 DnaJ central domain 153 213 1.7E-14 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 SUPERFAMILY SSF49493 264 350 5.36E-23 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 Pfam PF00226 DnaJ domain 7 69 3.3E-27 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 PRINTS PR00625 DnaJ domain signature 64 83 1.5E-31 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 PRINTS PR00625 DnaJ domain signature 9 27 1.5E-31 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 PRINTS PR00625 DnaJ domain signature 27 42 1.5E-31 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 PRINTS PR00625 DnaJ domain signature 44 64 1.5E-31 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 SMART SM00271 6 64 5.8E-30 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 Pfam PF01556 DnaJ C terminal domain 127 339 8.2E-41 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 ProSitePatterns PS00636 Nt-dnaJ domain signature. 49 68 - T 22-04-2016 IPR018253 DnaJ domain, conserved site PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 SUPERFAMILY SSF46565 4 115 1.57E-36 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 PANTHER PTHR24078:SF190 5 353 2.7E-147 T 22-04-2016 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 Gene3D G3DSA:2.10.230.10 144 206 8.7E-23 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 7 355 3.7E-134 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 SUPERFAMILY SSF57938 140 217 3.27E-21 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 4 378 40.765 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 SUPERFAMILY SSF49493 121 144 1.31E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 SUPERFAMILY SSF49493 219 267 1.31E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 Gene3D G3DSA:1.10.287.110 4 107 6.7E-37 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 Gene3D G3DSA:2.60.260.20 262 339 1.6E-22 T 22-04-2016 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 Gene3D G3DSA:2.60.260.20 122 143 5.9E-21 T 22-04-2016 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 Gene3D G3DSA:2.60.260.20 207 260 5.9E-21 T 22-04-2016 PNUC_RS09185 6e783e235bd01b40defc757cbab1117f 380 PANTHER PTHR24078 5 353 2.7E-147 T 22-04-2016 PNUC_RS00645 686bf28675ef10817f15180d56240d68 258 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 8 250 18.816 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PNUC_RS00645 686bf28675ef10817f15180d56240d68 258 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 17 234 8.2E-68 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PNUC_RS00645 686bf28675ef10817f15180d56240d68 258 Pfam PF00902 Sec-independent protein translocase protein (TatC) 19 229 2.9E-65 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PNUC_RS00645 686bf28675ef10817f15180d56240d68 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 110 136 3.9E-44 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PNUC_RS00645 686bf28675ef10817f15180d56240d68 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 92 110 3.9E-44 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PNUC_RS00645 686bf28675ef10817f15180d56240d68 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 15 42 3.9E-44 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PNUC_RS00645 686bf28675ef10817f15180d56240d68 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 162 190 3.9E-44 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PNUC_RS00645 686bf28675ef10817f15180d56240d68 258 PANTHER PTHR30371 13 252 4.6E-93 T 22-04-2016 PNUC_RS00645 686bf28675ef10817f15180d56240d68 258 PANTHER PTHR30371:SF0 13 252 4.6E-93 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PNUC_RS01720 4552bd644b94da1d65b63a0f45f33720 433 SUPERFAMILY SSF56176 39 179 2.8E-29 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PNUC_RS01720 4552bd644b94da1d65b63a0f45f33720 433 Pfam PF01565 FAD binding domain 41 149 1.9E-17 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PNUC_RS01720 4552bd644b94da1d65b63a0f45f33720 433 PANTHER PTHR13878 39 420 1.3E-43 T 22-04-2016 PNUC_RS01720 4552bd644b94da1d65b63a0f45f33720 433 PANTHER PTHR13878:SF52 39 420 1.3E-43 T 22-04-2016 PNUC_RS01720 4552bd644b94da1d65b63a0f45f33720 433 Gene3D G3DSA:3.30.465.10 66 179 6.5E-23 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PNUC_RS05495 db6f690b3a9a09209e4fa4fa0f1e55b4 114 PANTHER PTHR34182 6 114 2.5E-23 T 22-04-2016 PNUC_RS05495 db6f690b3a9a09209e4fa4fa0f1e55b4 114 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 8.2E-31 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PNUC_RS05495 db6f690b3a9a09209e4fa4fa0f1e55b4 114 PRINTS PR01651 Protein-export SecG membrane protein signature 41 57 8.2E-31 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PNUC_RS05495 db6f690b3a9a09209e4fa4fa0f1e55b4 114 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 8.2E-31 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PNUC_RS05495 db6f690b3a9a09209e4fa4fa0f1e55b4 114 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 8.2E-31 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PNUC_RS05495 db6f690b3a9a09209e4fa4fa0f1e55b4 114 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 1.0E-23 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PNUC_RS05495 db6f690b3a9a09209e4fa4fa0f1e55b4 114 Pfam PF03840 Preprotein translocase SecG subunit 7 75 2.3E-20 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PNUC_RS02835 8dc182424127a8ac69d156a80c3f4666 125 SUPERFAMILY SSF54427 15 119 4.82E-10 T 22-04-2016 IPR032710 NTF2-like domain PNUC_RS02835 8dc182424127a8ac69d156a80c3f4666 125 Gene3D G3DSA:3.10.450.50 7 118 3.8E-7 T 22-04-2016 IPR032710 NTF2-like domain PNUC_RS10460 152db20fa8c4d042cccb79048e5dddd4 282 PIRSF PIRSF038471 1 259 1.3E-54 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 PNUC_RS10460 152db20fa8c4d042cccb79048e5dddd4 282 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 2 243 3.2E-39 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 PNUC_RS10460 152db20fa8c4d042cccb79048e5dddd4 282 Pfam PF04085 rod shape-determining protein MreC 99 240 1.1E-29 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 PNUC_RS10460 152db20fa8c4d042cccb79048e5dddd4 282 PANTHER PTHR34138 1 239 1.2E-48 T 22-04-2016 PNUC_RS10460 152db20fa8c4d042cccb79048e5dddd4 282 PANTHER PTHR34138:SF1 1 239 1.2E-48 T 22-04-2016 PNUC_RS07440 aea2322852e301749d7c9ad4474f0f5a 265 Gene3D G3DSA:1.20.1260.10 80 178 2.7E-5 T 22-04-2016 IPR012347 Ferritin-related PNUC_RS07440 aea2322852e301749d7c9ad4474f0f5a 265 PANTHER PTHR21496:SF10 1 263 6.2E-76 T 22-04-2016 PNUC_RS07440 aea2322852e301749d7c9ad4474f0f5a 265 Pfam PF04305 Protein of unknown function (DUF455) 15 260 3.1E-94 T 22-04-2016 IPR007402 Protein of unknown function DUF455 PNUC_RS07440 aea2322852e301749d7c9ad4474f0f5a 265 PIRSF PIRSF012318 1 264 1.9E-94 T 22-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 PNUC_RS07440 aea2322852e301749d7c9ad4474f0f5a 265 PANTHER PTHR21496 1 263 6.2E-76 T 22-04-2016 PNUC_RS07440 aea2322852e301749d7c9ad4474f0f5a 265 SUPERFAMILY SSF47240 75 218 4.42E-14 T 22-04-2016 IPR009078 Ferritin-like superfamily PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 26 432 1.8E-145 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 Pfam PF07676 WD40-like Beta Propeller Repeat 241 273 3.4E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 Pfam PF07676 WD40-like Beta Propeller Repeat 284 318 2.2E-10 T 22-04-2016 IPR011659 WD40-like Beta Propeller PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 Pfam PF07676 WD40-like Beta Propeller Repeat 199 230 1.7E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 Pfam PF07676 WD40-like Beta Propeller Repeat 330 365 5.4E-7 T 22-04-2016 IPR011659 WD40-like Beta Propeller PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 PANTHER PTHR11731:SF123 1 128 1.8E-67 T 22-04-2016 PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 PANTHER PTHR11731:SF123 165 433 1.8E-67 T 22-04-2016 PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 Pfam PF04052 TolB amino-terminal domain 34 132 1.2E-26 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 Gene3D G3DSA:2.130.10.10 158 433 9.4E-77 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 SUPERFAMILY SSF52964 40 166 5.1E-31 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 Gene3D G3DSA:3.40.50.10070 33 157 4.8E-40 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 Hamap MF_00671 Protein TolB [tolB]. 15 431 33.031 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 SUPERFAMILY SSF69304 162 433 1.57E-59 T 22-04-2016 PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 PANTHER PTHR11731 1 128 1.8E-67 T 22-04-2016 PNUC_RS01450 ec9cf02501cb13d9e6e9e8364325ca8f 436 PANTHER PTHR11731 165 433 1.8E-67 T 22-04-2016 PNUC_RS06310 23fa0b18409e85216e5cb505fdc1dcaa 527 Pfam PF02653 Branched-chain amino acid transport system / permease component 235 510 7.3E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PNUC_RS06310 23fa0b18409e85216e5cb505fdc1dcaa 527 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 234 524 4.2E-127 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type PNUC_RS06310 23fa0b18409e85216e5cb505fdc1dcaa 527 PANTHER PTHR11795 219 527 1.2E-147 T 22-04-2016 PNUC_RS06310 23fa0b18409e85216e5cb505fdc1dcaa 527 SUPERFAMILY SSF48371 121 224 2.02E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 PNUC_RS06310 23fa0b18409e85216e5cb505fdc1dcaa 527 PANTHER PTHR11795:SF349 219 527 1.2E-147 T 22-04-2016 PNUC_RS06310 23fa0b18409e85216e5cb505fdc1dcaa 527 Gene3D G3DSA:1.25.10.10 121 227 1.6E-5 T 22-04-2016 IPR011989 Armadillo-like helical PNUC_RS06995 c0b3523cf564b8989a0da6e25ceb26d6 545 SUPERFAMILY SSF103473 15 55 5.49E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS06995 c0b3523cf564b8989a0da6e25ceb26d6 545 SUPERFAMILY SSF103473 83 479 5.49E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS06995 c0b3523cf564b8989a0da6e25ceb26d6 545 Pfam PF07690 Major Facilitator Superfamily 28 432 5.1E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS06995 c0b3523cf564b8989a0da6e25ceb26d6 545 Gene3D G3DSA:1.20.1250.20 268 478 4.5E-13 T 22-04-2016 PNUC_RS06995 c0b3523cf564b8989a0da6e25ceb26d6 545 PANTHER PTHR11360 84 304 1.6E-136 T 22-04-2016 PNUC_RS06995 c0b3523cf564b8989a0da6e25ceb26d6 545 PANTHER PTHR11360 325 493 1.6E-136 T 22-04-2016 PNUC_RS06995 c0b3523cf564b8989a0da6e25ceb26d6 545 PANTHER PTHR11360 13 56 1.6E-136 T 22-04-2016 PNUC_RS06995 c0b3523cf564b8989a0da6e25ceb26d6 545 Gene3D G3DSA:1.20.1250.20 18 231 1.8E-14 T 22-04-2016 PNUC_RS06995 c0b3523cf564b8989a0da6e25ceb26d6 545 PANTHER PTHR11360:SF135 84 304 1.6E-136 T 22-04-2016 PNUC_RS06995 c0b3523cf564b8989a0da6e25ceb26d6 545 PANTHER PTHR11360:SF135 325 493 1.6E-136 T 22-04-2016 PNUC_RS06995 c0b3523cf564b8989a0da6e25ceb26d6 545 PANTHER PTHR11360:SF135 13 56 1.6E-136 T 22-04-2016 PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 Pfam PF08278 DNA primase DnaG DnaB-binding 496 638 3.2E-7 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 TIGRFAM TIGR01391 dnaG: DNA primase 4 420 2.8E-140 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 Pfam PF13662 Toprim domain 265 329 2.6E-17 T 22-04-2016 IPR006171 Toprim domain PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 255 3.7E-36 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 Pfam PF10410 DnaB-helicase binding domain of primase 373 425 3.5E-8 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 SMART SM00493 263 334 1.2E-14 T 22-04-2016 IPR006171 Toprim domain PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 Pfam PF01807 CHC2 zinc finger 5 100 2.5E-39 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 Gene3D G3DSA:3.40.1360.10 245 370 1.2E-46 T 22-04-2016 PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 Hamap MF_00974 DNA primase [dnaG]. 3 643 27.998 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 Gene3D G3DSA:3.90.580.10 2 100 1.6E-39 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 SMART SM00400 35 89 2.0E-33 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 Gene3D G3DSA:3.90.980.10 115 244 2.2E-39 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 PANTHER PTHR30313 2 432 1.4E-137 T 22-04-2016 PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 SUPERFAMILY SSF56731 115 424 1.83E-100 T 22-04-2016 PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 Gene3D G3DSA:1.20.50.20 373 430 8.9E-15 T 22-04-2016 PNUC_RS08840 5e66d17ce1bd569a1b38539c5128cef7 645 SUPERFAMILY SSF57783 1 100 1.24E-35 T 22-04-2016 PNUC_RS01750 3e46701a2fb7189cc66df65cbd18614e 195 PANTHER PTHR11055 16 192 5.1E-94 T 22-04-2016 PNUC_RS01750 3e46701a2fb7189cc66df65cbd18614e 195 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 16 192 4.6E-72 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 PNUC_RS01750 3e46701a2fb7189cc66df65cbd18614e 195 Gene3D G3DSA:3.40.50.300 15 194 3.5E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01750 3e46701a2fb7189cc66df65cbd18614e 195 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 27 195 34.481 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 PNUC_RS01750 3e46701a2fb7189cc66df65cbd18614e 195 SUPERFAMILY SSF52540 27 194 1.78E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01750 3e46701a2fb7189cc66df65cbd18614e 195 Pfam PF01583 Adenylylsulphate kinase 29 183 1.1E-67 T 22-04-2016 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 SUPERFAMILY SSF50692 695 752 7.25E-5 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 Gene3D G3DSA:2.40.40.20 689 753 3.5E-5 T 22-04-2016 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 PANTHER PTHR11615 348 535 3.7E-158 T 22-04-2016 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 PANTHER PTHR11615 576 622 3.7E-158 T 22-04-2016 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 PANTHER PTHR11615 3 332 3.7E-158 T 22-04-2016 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 75 1.7E-18 T 22-04-2016 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 SUPERFAMILY SSF54292 1 74 9.34E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 622 8.0E-201 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 Pfam PF00384 Molybdopterin oxidoreductase 273 409 9.1E-18 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 Pfam PF00384 Molybdopterin oxidoreductase 529 622 1.2E-13 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 122 1.2E-16 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 SMART SM00929 83 123 1.2E-20 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 SUPERFAMILY SSF53706 214 646 4.23E-78 T 22-04-2016 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 Gene3D G3DSA:3.40.50.740 273 344 4.2E-41 T 22-04-2016 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 Gene3D G3DSA:3.40.50.740 481 646 4.2E-41 T 22-04-2016 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 Gene3D G3DSA:3.10.20.30 2 57 2.0E-6 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 Pfam PF01568 Molydopterin dinucleotide binding domain 697 754 1.5E-5 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 SUPERFAMILY SSF54862 75 210 4.18E-36 T 22-04-2016 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 PANTHER PTHR11615:SF115 348 535 3.7E-158 T 22-04-2016 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 PANTHER PTHR11615:SF115 576 622 3.7E-158 T 22-04-2016 PNUC_RS05455 acf31300c091c94118cf75a1210db168 771 PANTHER PTHR11615:SF115 3 332 3.7E-158 T 22-04-2016 PNUC_RS01970 073d793fdae7d99e25f5f27baece7ebd 103 Gene3D G3DSA:3.30.1360.20 20 95 1.3E-27 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PNUC_RS01970 073d793fdae7d99e25f5f27baece7ebd 103 SUPERFAMILY SSF55248 20 95 1.7E-27 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PNUC_RS01970 073d793fdae7d99e25f5f27baece7ebd 103 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 18 93 5.2E-25 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PNUC_RS01970 073d793fdae7d99e25f5f27baece7ebd 103 PANTHER PTHR12599 16 97 2.5E-29 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 PANTHER PTHR12534 3 225 9.3E-103 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 Gene3D G3DSA:1.10.287.610 99 151 8.8E-20 T 22-04-2016 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 PRINTS PR00395 Ribosomal protein S2 signature 5 23 2.2E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 PRINTS PR00395 Ribosomal protein S2 signature 157 174 2.2E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 PRINTS PR00395 Ribosomal protein S2 signature 195 209 2.2E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 PRINTS PR00395 Ribosomal protein S2 signature 174 185 2.2E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 PRINTS PR00395 Ribosomal protein S2 signature 86 103 2.2E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 PRINTS PR00395 Ribosomal protein S2 signature 36 45 2.2E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 Pfam PF00318 Ribosomal protein S2 8 223 2.1E-88 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 38.608 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 SUPERFAMILY SSF52313 5 229 1.31E-88 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 5.2E-94 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 Gene3D G3DSA:3.40.50.10490 157 239 2.9E-60 T 22-04-2016 PNUC_RS07590 5dd27bf300cd2bfa86613164c699cb3b 249 Gene3D G3DSA:3.40.50.10490 22 98 2.9E-60 T 22-04-2016 PNUC_RS08370 53f3439209042fb7c028efc9a341c238 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08370 53f3439209042fb7c028efc9a341c238 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08370 53f3439209042fb7c028efc9a341c238 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08370 53f3439209042fb7c028efc9a341c238 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 1.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08370 53f3439209042fb7c028efc9a341c238 231 PANTHER PTHR24322:SF540 12 128 1.7E-36 T 22-04-2016 PNUC_RS08370 53f3439209042fb7c028efc9a341c238 231 PANTHER PTHR24322 12 128 1.7E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08370 53f3439209042fb7c028efc9a341c238 231 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 45 193 2.0E-10 T 22-04-2016 PNUC_RS08370 53f3439209042fb7c028efc9a341c238 231 Gene3D G3DSA:3.40.50.720 10 231 2.5E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08370 53f3439209042fb7c028efc9a341c238 231 SUPERFAMILY SSF51735 10 231 2.19E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08370 53f3439209042fb7c028efc9a341c238 231 PANTHER PTHR24322 147 181 1.7E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08370 53f3439209042fb7c028efc9a341c238 231 PANTHER PTHR24322:SF540 147 181 1.7E-36 T 22-04-2016 PNUC_RS07205 9f110672f442f5faaf9c7a6adf0403d5 311 SUPERFAMILY SSF46785 6 87 1.3E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS07205 9f110672f442f5faaf9c7a6adf0403d5 311 PANTHER PTHR30346:SF15 6 303 5.9E-81 T 22-04-2016 PNUC_RS07205 9f110672f442f5faaf9c7a6adf0403d5 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.3E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS07205 9f110672f442f5faaf9c7a6adf0403d5 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS07205 9f110672f442f5faaf9c7a6adf0403d5 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS07205 9f110672f442f5faaf9c7a6adf0403d5 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS07205 9f110672f442f5faaf9c7a6adf0403d5 311 Pfam PF03466 LysR substrate binding domain 95 298 2.9E-42 T 22-04-2016 IPR005119 LysR, substrate-binding PNUC_RS07205 9f110672f442f5faaf9c7a6adf0403d5 311 Gene3D G3DSA:1.10.10.10 6 84 9.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS07205 9f110672f442f5faaf9c7a6adf0403d5 311 PANTHER PTHR30346 6 303 5.9E-81 T 22-04-2016 PNUC_RS07205 9f110672f442f5faaf9c7a6adf0403d5 311 Gene3D G3DSA:3.40.190.10 96 178 1.9E-12 T 22-04-2016 PNUC_RS07205 9f110672f442f5faaf9c7a6adf0403d5 311 SUPERFAMILY SSF53850 94 301 5.16E-41 T 22-04-2016 PNUC_RS07205 9f110672f442f5faaf9c7a6adf0403d5 311 Gene3D G3DSA:3.40.190.10 179 271 2.1E-24 T 22-04-2016 PNUC_RS08285 5372ad4210f509cfc31c7a3ac836ddb1 512 Gene3D G3DSA:3.30.420.150 135 325 1.9E-47 T 22-04-2016 PNUC_RS08285 5372ad4210f509cfc31c7a3ac836ddb1 512 PANTHER PTHR30005 2 504 8.3E-148 T 22-04-2016 PNUC_RS08285 5372ad4210f509cfc31c7a3ac836ddb1 512 PIRSF PIRSF001267 1 512 1.3E-189 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 PNUC_RS08285 5372ad4210f509cfc31c7a3ac836ddb1 512 SUPERFAMILY SSF109604 327 510 1.02E-42 T 22-04-2016 PNUC_RS08285 5372ad4210f509cfc31c7a3ac836ddb1 512 PANTHER PTHR30005:SF4 2 504 8.3E-148 T 22-04-2016 PNUC_RS08285 5372ad4210f509cfc31c7a3ac836ddb1 512 Pfam PF02541 Ppx/GppA phosphatase family 34 321 4.9E-69 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 PNUC_RS08285 5372ad4210f509cfc31c7a3ac836ddb1 512 SUPERFAMILY SSF53067 8 132 2.07E-32 T 22-04-2016 PNUC_RS08285 5372ad4210f509cfc31c7a3ac836ddb1 512 Gene3D G3DSA:3.30.420.40 3 131 2.0E-40 T 22-04-2016 PNUC_RS08285 5372ad4210f509cfc31c7a3ac836ddb1 512 SUPERFAMILY SSF53067 137 325 1.1E-41 T 22-04-2016 PNUC_RS05215 447f7b3a2ad00ce66c3a0306f37a225c 431 Gene3D G3DSA:3.40.190.10 185 290 3.8E-8 T 22-04-2016 PNUC_RS05215 447f7b3a2ad00ce66c3a0306f37a225c 431 PANTHER PTHR30024 23 430 1.5E-133 T 22-04-2016 PNUC_RS05215 447f7b3a2ad00ce66c3a0306f37a225c 431 SUPERFAMILY SSF53850 60 293 1.16E-27 T 22-04-2016 PNUC_RS05215 447f7b3a2ad00ce66c3a0306f37a225c 431 PANTHER PTHR30024:SF7 23 430 1.5E-133 T 22-04-2016 PNUC_RS05215 447f7b3a2ad00ce66c3a0306f37a225c 431 Pfam PF13379 NMT1-like family 56 305 9.2E-103 T 22-04-2016 PNUC_RS06865 41e98df570209856a03e18e744946ddb 115 Pfam PF01197 Ribosomal protein L31 1 79 6.8E-30 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS06865 41e98df570209856a03e18e744946ddb 115 SUPERFAMILY SSF143800 1 80 8.24E-23 T 22-04-2016 PNUC_RS06865 41e98df570209856a03e18e744946ddb 115 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 5.0E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS06865 41e98df570209856a03e18e744946ddb 115 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 25.877 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS06865 41e98df570209856a03e18e744946ddb 115 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS06865 41e98df570209856a03e18e744946ddb 115 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.0E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS06865 41e98df570209856a03e18e744946ddb 115 PRINTS PR01249 Ribosomal protein L31 signature 60 78 4.0E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS06865 41e98df570209856a03e18e744946ddb 115 PRINTS PR01249 Ribosomal protein L31 signature 45 60 4.0E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS06865 41e98df570209856a03e18e744946ddb 115 PANTHER PTHR33280 1 79 1.1E-30 T 22-04-2016 PNUC_RS03550 ea8e16b80c12f61b15623139c968d68a 564 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 466 477 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS03550 ea8e16b80c12f61b15623139c968d68a 564 Pfam PF00920 Dehydratase family 36 555 4.7E-206 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS03550 ea8e16b80c12f61b15623139c968d68a 564 SUPERFAMILY SSF52016 381 559 4.87E-58 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PNUC_RS03550 ea8e16b80c12f61b15623139c968d68a 564 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS03550 ea8e16b80c12f61b15623139c968d68a 564 PANTHER PTHR21000 1 559 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS03550 ea8e16b80c12f61b15623139c968d68a 564 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 6 558 44.447 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS03550 ea8e16b80c12f61b15623139c968d68a 564 SUPERFAMILY SSF143975 3 379 1.83E-134 T 22-04-2016 PNUC_RS03550 ea8e16b80c12f61b15623139c968d68a 564 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 19 558 5.2E-231 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS03550 ea8e16b80c12f61b15623139c968d68a 564 PANTHER PTHR21000:SF5 1 559 0.0 T 22-04-2016 PNUC_RS07470 177db7ddb98afad789e0cb49caa30bf2 470 PIRSF PIRSF005522 1 470 1.5E-230 T 22-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 PNUC_RS07470 177db7ddb98afad789e0cb49caa30bf2 470 Pfam PF14403 Circularly permuted ATP-grasp type 2 71 446 5.3E-163 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 PNUC_RS07470 177db7ddb98afad789e0cb49caa30bf2 470 SUPERFAMILY SSF56059 316 461 1.6E-62 T 22-04-2016 PNUC_RS07470 177db7ddb98afad789e0cb49caa30bf2 470 SUPERFAMILY SSF56059 15 209 1.6E-62 T 22-04-2016 PNUC_RS07470 177db7ddb98afad789e0cb49caa30bf2 470 PANTHER PTHR34595 5 470 2.3E-288 T 22-04-2016 PNUC_RS07470 177db7ddb98afad789e0cb49caa30bf2 470 PANTHER PTHR34595:SF3 5 470 2.3E-288 T 22-04-2016 PNUC_RS08875 279bb3daa03be9d7cea594179cec9d4d 77 SUPERFAMILY SSF116842 20 75 6.8E-17 T 22-04-2016 PNUC_RS08875 279bb3daa03be9d7cea594179cec9d4d 77 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 23 73 4.4E-19 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PNUC_RS08875 279bb3daa03be9d7cea594179cec9d4d 77 PANTHER PTHR34137 10 74 4.3E-13 T 22-04-2016 PNUC_RS08875 279bb3daa03be9d7cea594179cec9d4d 77 Gene3D G3DSA:1.10.287.1040 20 75 3.3E-20 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PNUC_RS08875 279bb3daa03be9d7cea594179cec9d4d 77 Pfam PF02609 Exonuclease VII small subunit 23 73 1.2E-17 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PNUC_RS08875 279bb3daa03be9d7cea594179cec9d4d 77 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 22 62 2.0E-6 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PNUC_RS08875 279bb3daa03be9d7cea594179cec9d4d 77 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 22 77 11.654 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 3.4E-28 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 PIRSF PIRSF000732 1 583 5.0E-199 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 571 6.0E-159 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 PANTHER PTHR22931 70 563 2.1E-147 T 22-04-2016 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 PANTHER PTHR22931:SF28 70 563 2.1E-147 T 22-04-2016 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 Gene3D G3DSA:3.20.20.60 267 580 3.6E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 263 554 4.5E-102 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 SUPERFAMILY SSF51621 263 559 5.5E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 195 206 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 460 478 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 SUPERFAMILY SSF47831 28 144 3.92E-29 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 Gene3D G3DSA:1.10.274.10 27 134 1.2E-31 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 Gene3D G3DSA:3.50.30.10 135 266 5.9E-43 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 Pfam PF00391 PEP-utilising enzyme, mobile domain 163 236 1.1E-23 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 SUPERFAMILY SSF52009 128 256 2.49E-31 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 477 492 3.1E-24 T 22-04-2016 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 513 525 3.1E-24 T 22-04-2016 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 304 323 3.1E-24 T 22-04-2016 PNUC_RS10110 1801f18bff9ab1268844d8900f984a87 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 460 475 3.1E-24 T 22-04-2016 PNUC_RS06125 8775eb9545312064af5822e68f4ad408 517 Gene3D G3DSA:3.30.70.270 344 507 1.3E-57 T 22-04-2016 PNUC_RS06125 8775eb9545312064af5822e68f4ad408 517 PANTHER PTHR10799 1 499 2.3E-43 T 22-04-2016 PNUC_RS06125 8775eb9545312064af5822e68f4ad408 517 Pfam PF02743 Cache domain 69 276 1.8E-13 T 22-04-2016 IPR033479 Double Cache domain 1 PNUC_RS06125 8775eb9545312064af5822e68f4ad408 517 Pfam PF00990 Diguanylate cyclase, GGDEF domain 343 499 2.7E-48 T 22-04-2016 IPR000160 GGDEF domain PNUC_RS06125 8775eb9545312064af5822e68f4ad408 517 SUPERFAMILY SSF55073 348 506 1.18E-51 T 22-04-2016 IPR029787 Nucleotide cyclase PNUC_RS06125 8775eb9545312064af5822e68f4ad408 517 SMART SM00267 332 504 9.3E-62 T 22-04-2016 IPR000160 GGDEF domain PNUC_RS06125 8775eb9545312064af5822e68f4ad408 517 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 341 503 1.8E-45 T 22-04-2016 IPR000160 GGDEF domain PNUC_RS06125 8775eb9545312064af5822e68f4ad408 517 Gene3D G3DSA:3.30.450.20 102 195 2.4E-10 T 22-04-2016 PNUC_RS06125 8775eb9545312064af5822e68f4ad408 517 PANTHER PTHR10799:SF774 1 499 2.3E-43 T 22-04-2016 PNUC_RS00855 c5955dd65cc0c137cc55f401f50cfd98 209 PANTHER PTHR11237 2 209 1.9E-101 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 PNUC_RS00855 c5955dd65cc0c137cc55f401f50cfd98 209 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 8 209 30.986 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 PNUC_RS00855 c5955dd65cc0c137cc55f401f50cfd98 209 SUPERFAMILY SSF47240 44 124 1.35E-16 T 22-04-2016 IPR009078 Ferritin-like superfamily PNUC_RS00855 c5955dd65cc0c137cc55f401f50cfd98 209 PANTHER PTHR11237:SF3 2 209 1.9E-101 T 22-04-2016 PNUC_RS00855 c5955dd65cc0c137cc55f401f50cfd98 209 Gene3D G3DSA:1.20.1260.10 51 176 1.2E-7 T 22-04-2016 IPR012347 Ferritin-related PNUC_RS00855 c5955dd65cc0c137cc55f401f50cfd98 209 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 49 208 1.8E-41 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 PNUC_RS00145 4d398482dd7566f7101d8bc72b0269b9 709 Gene3D G3DSA:3.40.50.300 144 334 3.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00145 4d398482dd7566f7101d8bc72b0269b9 709 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 709 21.559 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PNUC_RS00145 4d398482dd7566f7101d8bc72b0269b9 709 Gene3D G3DSA:3.40.50.300 428 605 8.3E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00145 4d398482dd7566f7101d8bc72b0269b9 709 TIGRFAM TIGR00595 priA: primosomal protein N' 170 680 4.4E-148 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PNUC_RS00145 4d398482dd7566f7101d8bc72b0269b9 709 SUPERFAMILY SSF52540 108 331 2.05E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00145 4d398482dd7566f7101d8bc72b0269b9 709 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PNUC_RS00145 4d398482dd7566f7101d8bc72b0269b9 709 SMART SM00487 142 343 1.4E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PNUC_RS00145 4d398482dd7566f7101d8bc72b0269b9 709 SUPERFAMILY SSF52540 429 584 3.99E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00145 4d398482dd7566f7101d8bc72b0269b9 709 SMART SM00490 460 557 4.9E-5 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS00145 4d398482dd7566f7101d8bc72b0269b9 709 Pfam PF00271 Helicase conserved C-terminal domain 482 556 3.1E-6 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS00145 4d398482dd7566f7101d8bc72b0269b9 709 PANTHER PTHR30580 1 709 1.3E-180 T 22-04-2016 PNUC_RS00145 4d398482dd7566f7101d8bc72b0269b9 709 Pfam PF00270 DEAD/DEAH box helicase 167 311 3.7E-13 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PNUC_RS09925 45d08a24f98d4fa7ac0da2d5eeb4ffcf 296 SUPERFAMILY SSF52540 5 159 6.04E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09925 45d08a24f98d4fa7ac0da2d5eeb4ffcf 296 PANTHER PTHR30448:SF0 1 289 3.3E-115 T 22-04-2016 PNUC_RS09925 45d08a24f98d4fa7ac0da2d5eeb4ffcf 296 Gene3D G3DSA:3.40.50.300 4 157 2.5E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09925 45d08a24f98d4fa7ac0da2d5eeb4ffcf 296 PANTHER PTHR30448 1 289 3.3E-115 T 22-04-2016 PNUC_RS09925 45d08a24f98d4fa7ac0da2d5eeb4ffcf 296 PIRSF PIRSF005052 1 289 1.0E-104 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 PNUC_RS09925 45d08a24f98d4fa7ac0da2d5eeb4ffcf 296 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 290 39.303 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 PNUC_RS09925 45d08a24f98d4fa7ac0da2d5eeb4ffcf 296 Pfam PF03668 P-loop ATPase protein family 1 277 2.7E-92 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 PRINTS PR00139 Asparaginase/glutaminase family signature 280 298 2.4E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 PRINTS PR00139 Asparaginase/glutaminase family signature 96 114 2.4E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 PRINTS PR00139 Asparaginase/glutaminase family signature 14 25 2.4E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 PIRSF PIRSF001220 8 345 1.8E-50 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 97 107 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 Gene3D G3DSA:3.40.50.40 234 334 4.6E-23 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 Gene3D G3DSA:3.40.50.1170 10 191 1.8E-37 T 22-04-2016 IPR027474 L-asparaginase, N-terminal PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 PANTHER PTHR11707 12 334 3.3E-32 T 22-04-2016 PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 SUPERFAMILY SSF53774 7 332 1.57E-60 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 PIRSF PIRSF500176 10 346 1.7E-48 T 22-04-2016 PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 SMART SM00870 13 339 7.4E-68 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 PANTHER PTHR11707:SF29 12 334 3.3E-32 T 22-04-2016 PNUC_RS02200 3184878a1c55e2b2756d4607d86c1b59 358 Pfam PF00710 Asparaginase, N-terminal 13 206 1.1E-40 T 22-04-2016 IPR027474 L-asparaginase, N-terminal PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 437 3.7E-162 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 PRINTS PR00083 Histidinol dehydrogenase signature 147 173 3.7E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 PRINTS PR00083 Histidinol dehydrogenase signature 181 207 3.7E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 PRINTS PR00083 Histidinol dehydrogenase signature 211 236 3.7E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 PRINTS PR00083 Histidinol dehydrogenase signature 240 261 3.7E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 PRINTS PR00083 Histidinol dehydrogenase signature 372 390 3.7E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 PRINTS PR00083 Histidinol dehydrogenase signature 262 281 3.7E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 3.7E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 PRINTS PR00083 Histidinol dehydrogenase signature 331 356 3.7E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 PANTHER PTHR21256 28 440 9.5E-199 T 22-04-2016 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 240 272 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 SUPERFAMILY SSF53720 33 438 1.06E-86 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 438 41.337 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 PIRSF PIRSF000099 6 440 1.2E-160 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 Gene3D G3DSA:3.40.50.1980 32 250 1.8E-80 T 22-04-2016 PNUC_RS00590 8511be2ad507ecaadf8fe22d1591d320 440 Pfam PF00815 Histidinol dehydrogenase 30 438 5.6E-170 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PNUC_RS05970 9cd7829f0c4f94c3b9fa7de39aff5b7d 287 Pfam PF11185 Protein of unknown function (DUF2971) 149 217 5.0E-5 T 22-04-2016 IPR021352 Protein of unknown function DUF2971 PNUC_RS03960 d02de4a2fbd927ab374b1ed07ea0205c 121 SUPERFAMILY SSF81343 10 121 9.81E-32 T 22-04-2016 PNUC_RS03960 d02de4a2fbd927ab374b1ed07ea0205c 121 PANTHER PTHR38689 18 121 2.6E-26 T 22-04-2016 PNUC_RS03960 d02de4a2fbd927ab374b1ed07ea0205c 121 PIRSF PIRSF000169 8 121 6.2E-39 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 PNUC_RS03960 d02de4a2fbd927ab374b1ed07ea0205c 121 Gene3D G3DSA:1.20.1300.10 10 121 2.9E-36 T 22-04-2016 PNUC_RS03960 d02de4a2fbd927ab374b1ed07ea0205c 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 108 6.6E-16 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 PNUC_RS03960 d02de4a2fbd927ab374b1ed07ea0205c 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 15 119 3.5E-36 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 PNUC_RS03960 d02de4a2fbd927ab374b1ed07ea0205c 121 PANTHER PTHR38689:SF1 18 121 2.6E-26 T 22-04-2016 PNUC_RS02275 684edf4023050257ae71c209f1458a30 320 PANTHER PTHR10859:SF49 9 318 5.1E-111 T 22-04-2016 PNUC_RS02275 684edf4023050257ae71c209f1458a30 320 PANTHER PTHR10859 9 318 5.1E-111 T 22-04-2016 PNUC_RS02275 684edf4023050257ae71c209f1458a30 320 Pfam PF00535 Glycosyl transferase family 2 12 176 1.4E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PNUC_RS02275 684edf4023050257ae71c209f1458a30 320 SUPERFAMILY SSF53448 8 264 8.44E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS02275 684edf4023050257ae71c209f1458a30 320 Gene3D G3DSA:3.90.550.10 8 131 6.8E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS03245 c86453b708b2b1a3228aba4a3a860588 384 PANTHER PTHR33529:SF1 4 376 1.1E-60 T 22-04-2016 PNUC_RS03245 c86453b708b2b1a3228aba4a3a860588 384 PANTHER PTHR33529 4 376 1.1E-60 T 22-04-2016 PNUC_RS03245 c86453b708b2b1a3228aba4a3a860588 384 Pfam PF03739 Predicted permease YjgP/YjgQ family 11 377 1.5E-60 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 PNUC_RS03245 c86453b708b2b1a3228aba4a3a860588 384 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 8 380 2.9E-95 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 PNUC_RS04490 ff1cff84d9b2e85e38aee244bedf0863 255 PANTHER PTHR37844 1 255 2.8E-43 T 22-04-2016 PNUC_RS04490 ff1cff84d9b2e85e38aee244bedf0863 255 Gene3D G3DSA:3.60.21.10 146 233 1.9E-16 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS04490 ff1cff84d9b2e85e38aee244bedf0863 255 Gene3D G3DSA:3.60.21.10 1 64 1.9E-16 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS04490 ff1cff84d9b2e85e38aee244bedf0863 255 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 8.9E-9 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PNUC_RS04490 ff1cff84d9b2e85e38aee244bedf0863 255 SUPERFAMILY SSF56300 154 242 1.65E-25 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS04490 ff1cff84d9b2e85e38aee244bedf0863 255 SUPERFAMILY SSF56300 1 115 1.65E-25 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS07635 16b415742654005b978509c5eceea132 298 PANTHER PTHR18895 21 298 1.3E-73 T 22-04-2016 PNUC_RS07635 16b415742654005b978509c5eceea132 298 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 287 3.3E-58 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PNUC_RS07635 16b415742654005b978509c5eceea132 298 Gene3D G3DSA:1.10.8.10 10 100 5.8E-11 T 22-04-2016 PNUC_RS07635 16b415742654005b978509c5eceea132 298 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 203 209 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PNUC_RS07635 16b415742654005b978509c5eceea132 298 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 10 293 5.9E-86 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PNUC_RS07635 16b415742654005b978509c5eceea132 298 SUPERFAMILY SSF53335 11 268 3.82E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS07635 16b415742654005b978509c5eceea132 298 PANTHER PTHR18895:SF66 21 298 1.3E-73 T 22-04-2016 PNUC_RS07635 16b415742654005b978509c5eceea132 298 Pfam PF05175 Methyltransferase small domain 128 215 5.2E-15 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 PNUC_RS07635 16b415742654005b978509c5eceea132 298 Gene3D G3DSA:3.40.50.150 107 282 2.8E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS09065 d437d47b71ef9d7c0519500b7c7b9bb6 186 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 36 130 4.6E-16 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 PNUC_RS09065 d437d47b71ef9d7c0519500b7c7b9bb6 186 Gene3D G3DSA:3.40.140.10 27 176 3.6E-36 T 22-04-2016 PNUC_RS09065 d437d47b71ef9d7c0519500b7c7b9bb6 186 PANTHER PTHR11079 27 130 1.3E-21 T 22-04-2016 PNUC_RS09065 d437d47b71ef9d7c0519500b7c7b9bb6 186 SUPERFAMILY SSF53927 26 176 1.0E-35 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PNUC_RS04815 96df8197e1935c2d824d7f71beb7d370 186 Pfam PF05233 PHB accumulation regulatory domain 77 115 1.6E-17 T 22-04-2016 IPR007897 PHB accumulation regulatory PNUC_RS04815 96df8197e1935c2d824d7f71beb7d370 186 Pfam PF05233 PHB accumulation regulatory domain 127 165 7.9E-15 T 22-04-2016 IPR007897 PHB accumulation regulatory PNUC_RS04815 96df8197e1935c2d824d7f71beb7d370 186 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 13 72 5.4E-30 T 22-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal PNUC_RS04815 96df8197e1935c2d824d7f71beb7d370 186 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 12 117 1.6E-45 T 22-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR PNUC_RS09320 30c8521cc30c1ebe3644c427c598aa93 204 Gene3D G3DSA:1.20.1050.10 90 199 8.9E-22 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS09320 30c8521cc30c1ebe3644c427c598aa93 204 PANTHER PTHR11260:SF256 1 202 2.6E-45 T 22-04-2016 PNUC_RS09320 30c8521cc30c1ebe3644c427c598aa93 204 Gene3D G3DSA:3.40.30.10 1 89 3.5E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS09320 30c8521cc30c1ebe3644c427c598aa93 204 SUPERFAMILY SSF52833 1 100 2.98E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS09320 30c8521cc30c1ebe3644c427c598aa93 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 194 7.5E-9 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal PNUC_RS09320 30c8521cc30c1ebe3644c427c598aa93 204 PANTHER PTHR11260 1 202 2.6E-45 T 22-04-2016 PNUC_RS09320 30c8521cc30c1ebe3644c427c598aa93 204 SUPERFAMILY SSF47616 73 201 6.68E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS09320 30c8521cc30c1ebe3644c427c598aa93 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 8.6E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PNUC_RS08575 11071f7c0a217e0379f17d6ae82a3968 181 Pfam PF13664 Domain of unknown function (DUF4149) 40 133 1.9E-6 T 22-04-2016 IPR025423 Domain of unknown function DUF4149 PNUC_RS02505 f372fcff4db9802fb7230ac339e20f14 180 PANTHER PTHR33567 11 180 2.6E-25 T 22-04-2016 PNUC_RS02505 f372fcff4db9802fb7230ac339e20f14 180 Pfam PF02417 Chromate transporter 13 176 1.2E-30 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 SUPERFAMILY SSF88659 573 675 6.17E-27 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 40 676 40.201 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 439 664 1.9E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 Gene3D G3DSA:1.10.601.10 172 512 9.7E-118 T 22-04-2016 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 Pfam PF03979 Sigma-70 factor, region 1.1 62 140 2.4E-21 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 Gene3D G3DSA:1.10.10.10 606 676 1.8E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 PANTHER PTHR30603:SF0 390 678 1.7E-207 T 22-04-2016 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 PANTHER PTHR30603:SF0 50 212 1.7E-207 T 22-04-2016 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 Gene3D G3DSA:1.10.10.10 516 567 3.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 636 662 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 SUPERFAMILY SSF88946 175 510 6.28E-94 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 PANTHER PTHR30603 390 678 1.7E-207 T 22-04-2016 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 PANTHER PTHR30603 50 212 1.7E-207 T 22-04-2016 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 Pfam PF04542 Sigma-70 region 2 446 512 2.3E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 SUPERFAMILY SSF88659 516 589 1.59E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 467 480 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 Pfam PF04539 Sigma-70 region 3 522 598 5.9E-24 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 Pfam PF04545 Sigma-70, region 4 611 664 7.7E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 PRINTS PR00046 Major sigma-70 factor signature 615 627 1.1E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 PRINTS PR00046 Major sigma-70 factor signature 467 480 1.1E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 PRINTS PR00046 Major sigma-70 factor signature 491 499 1.1E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 PRINTS PR00046 Major sigma-70 factor signature 636 651 1.1E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 PRINTS PR00046 Major sigma-70 factor signature 651 662 1.1E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 439 675 3.7E-116 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 Pfam PF04546 Sigma-70, non-essential region 199 412 8.7E-57 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS08830 caada059d4f2d55248cdc6739dc28e4a 678 Pfam PF00140 Sigma-70 factor, region 1.2 158 190 1.0E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PNUC_RS07390 2d8062d6547c9daa02705f841617a7d0 419 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 138 382 5.3E-18 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PNUC_RS07390 2d8062d6547c9daa02705f841617a7d0 419 PANTHER PTHR30160 225 418 9.7E-27 T 22-04-2016 PNUC_RS07390 2d8062d6547c9daa02705f841617a7d0 419 PANTHER PTHR30160 29 208 9.7E-27 T 22-04-2016 PNUC_RS07390 2d8062d6547c9daa02705f841617a7d0 419 PANTHER PTHR30160:SF1 225 418 9.7E-27 T 22-04-2016 PNUC_RS07390 2d8062d6547c9daa02705f841617a7d0 419 PANTHER PTHR30160:SF1 29 208 9.7E-27 T 22-04-2016 PNUC_RS07390 2d8062d6547c9daa02705f841617a7d0 419 Gene3D G3DSA:3.40.50.2000 45 190 5.6E-12 T 22-04-2016 PNUC_RS07390 2d8062d6547c9daa02705f841617a7d0 419 Gene3D G3DSA:3.40.50.2000 229 408 2.4E-35 T 22-04-2016 PNUC_RS07390 2d8062d6547c9daa02705f841617a7d0 419 SUPERFAMILY SSF53756 45 411 6.28E-51 T 22-04-2016 PNUC_RS02090 41189626a66da658b77a3c07218d52bd 311 PANTHER PTHR10982 1 307 3.6E-130 T 22-04-2016 PNUC_RS02090 41189626a66da658b77a3c07218d52bd 311 PIRSF PIRSF000446 1 311 5.0E-109 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 PNUC_RS02090 41189626a66da658b77a3c07218d52bd 311 SUPERFAMILY SSF52151 3 120 2.88E-75 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PNUC_RS02090 41189626a66da658b77a3c07218d52bd 311 SUPERFAMILY SSF52151 190 308 2.88E-75 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PNUC_RS02090 41189626a66da658b77a3c07218d52bd 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 311 9.4E-27 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain PNUC_RS02090 41189626a66da658b77a3c07218d52bd 311 Gene3D G3DSA:3.40.366.10 2 120 3.3E-65 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PNUC_RS02090 41189626a66da658b77a3c07218d52bd 311 Gene3D G3DSA:3.40.366.10 197 292 3.3E-65 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PNUC_RS02090 41189626a66da658b77a3c07218d52bd 311 Gene3D G3DSA:3.30.70.250 123 196 3.7E-28 T 22-04-2016 PNUC_RS02090 41189626a66da658b77a3c07218d52bd 311 Pfam PF00698 Acyl transferase domain 5 285 1.5E-32 T 22-04-2016 IPR014043 Acyl transferase PNUC_RS02090 41189626a66da658b77a3c07218d52bd 311 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 291 8.3E-105 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 PNUC_RS02090 41189626a66da658b77a3c07218d52bd 311 SUPERFAMILY SSF55048 128 193 1.7E-15 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 PNUC_RS02940 3faeec9e6c85c5087da14a028ccd6258 227 SUPERFAMILY SSF56925 50 227 2.07E-7 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PNUC_RS02940 3faeec9e6c85c5087da14a028ccd6258 227 Gene3D G3DSA:2.40.160.20 59 227 2.6E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PNUC_RS02940 3faeec9e6c85c5087da14a028ccd6258 227 Pfam PF13505 Outer membrane protein beta-barrel domain 5 227 3.9E-9 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 SUPERFAMILY SSF48256 16 434 1.83E-162 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 18 429 2.5E-236 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 Gene3D G3DSA:1.10.580.10 56 285 3.8E-96 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 PIRSF PIRSF001369 41 437 7.8E-161 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 PRINTS PR00143 Citrate synthase signature 303 323 7.28E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 PRINTS PR00143 Citrate synthase signature 387 401 7.28E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 PRINTS PR00143 Citrate synthase signature 169 182 7.28E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 PRINTS PR00143 Citrate synthase signature 245 273 7.28E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 PRINTS PR00143 Citrate synthase signature 367 383 7.28E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 PRINTS PR00143 Citrate synthase signature 223 238 7.28E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 ProSitePatterns PS00480 Citrate synthase signature. 310 322 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 PANTHER PTHR11739 8 436 1.0E-196 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 Pfam PF00285 Citrate synthase, C-terminal domain 52 419 2.5E-132 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 PANTHER PTHR11739:SF13 8 436 1.0E-196 T 22-04-2016 PNUC_RS03980 30ca80ffc2358eeaf9ed404de29e91e5 437 Gene3D G3DSA:1.10.230.10 286 381 1.6E-38 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain PNUC_RS04065 4660efb4b100b511827b16f499ff60df 207 PANTHER PTHR10108 1 183 2.9E-41 T 22-04-2016 PNUC_RS04065 4660efb4b100b511827b16f499ff60df 207 Gene3D G3DSA:3.40.50.150 8 205 3.2E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS04065 4660efb4b100b511827b16f499ff60df 207 SUPERFAMILY SSF53335 7 184 4.43E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS04065 4660efb4b100b511827b16f499ff60df 207 PANTHER PTHR10108:SF838 1 183 2.9E-41 T 22-04-2016 PNUC_RS04065 4660efb4b100b511827b16f499ff60df 207 Pfam PF13649 Methyltransferase domain 43 136 4.8E-12 T 22-04-2016 PNUC_RS08440 b2784d772fdeeb4d0ae302e11599502c 336 Pfam PF01544 CorA-like Mg2+ transporter protein 42 330 1.4E-61 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PNUC_RS08440 b2784d772fdeeb4d0ae302e11599502c 336 SUPERFAMILY SSF144083 277 332 8.89E-11 T 22-04-2016 PNUC_RS08440 b2784d772fdeeb4d0ae302e11599502c 336 Gene3D G3DSA:1.20.58.340 263 334 1.8E-14 T 22-04-2016 PNUC_RS08440 b2784d772fdeeb4d0ae302e11599502c 336 SUPERFAMILY SSF143865 6 269 6.15E-39 T 22-04-2016 PNUC_RS08440 b2784d772fdeeb4d0ae302e11599502c 336 Gene3D G3DSA:1.20.58.340 146 257 1.6E-5 T 22-04-2016 PNUC_RS08440 b2784d772fdeeb4d0ae302e11599502c 336 PANTHER PTHR21535 71 334 8.9E-20 T 22-04-2016 PNUC_RS05050 be9aba0601a3fe096aa10a46a9e10ae0 357 PANTHER PTHR30518:SF2 6 357 5.8E-84 T 22-04-2016 PNUC_RS05050 be9aba0601a3fe096aa10a46a9e10ae0 357 Gene3D G3DSA:3.30.160.60 318 353 6.0E-16 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 PNUC_RS05050 be9aba0601a3fe096aa10a46a9e10ae0 357 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 30 352 8.8E-74 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like PNUC_RS05050 be9aba0601a3fe096aa10a46a9e10ae0 357 PANTHER PTHR30518 6 357 5.8E-84 T 22-04-2016 PNUC_RS05050 be9aba0601a3fe096aa10a46a9e10ae0 357 Pfam PF02618 YceG-like family 59 344 1.1E-78 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like PNUC_RS00575 374e38f8ba1ce15a0fb289fd60a2cad3 82 PIRSF PIRSF003113 1 82 5.1E-22 T 22-04-2016 IPR002634 BolA protein PNUC_RS00575 374e38f8ba1ce15a0fb289fd60a2cad3 82 Gene3D G3DSA:3.30.300.90 2 79 1.1E-28 T 22-04-2016 IPR002634 BolA protein PNUC_RS00575 374e38f8ba1ce15a0fb289fd60a2cad3 82 PANTHER PTHR12735 3 79 9.8E-18 T 22-04-2016 PNUC_RS00575 374e38f8ba1ce15a0fb289fd60a2cad3 82 PANTHER PTHR12735:SF3 3 79 9.8E-18 T 22-04-2016 PNUC_RS00575 374e38f8ba1ce15a0fb289fd60a2cad3 82 Pfam PF01722 BolA-like protein 20 75 5.4E-20 T 22-04-2016 IPR002634 BolA protein PNUC_RS00575 374e38f8ba1ce15a0fb289fd60a2cad3 82 SUPERFAMILY SSF82657 1 78 7.59E-28 T 22-04-2016 IPR002634 BolA protein PNUC_RS00195 b4e09e2fbf24c215196a08a51cf9f8c1 218 Pfam PF00583 Acetyltransferase (GNAT) family 82 158 6.0E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 PNUC_RS00195 b4e09e2fbf24c215196a08a51cf9f8c1 218 SUPERFAMILY SSF55729 23 162 3.17E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS00195 b4e09e2fbf24c215196a08a51cf9f8c1 218 Gene3D G3DSA:3.40.630.30 23 160 3.1E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 SUPERFAMILY SSF51905 293 412 5.4E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 SUPERFAMILY SSF51905 23 198 5.4E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 PANTHER PTHR13789:SF5 16 421 1.3E-80 T 22-04-2016 PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 PANTHER PTHR13789 16 421 1.3E-80 T 22-04-2016 PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 23 419 1.1E-103 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 Gene3D G3DSA:3.50.50.60 23 203 2.1E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 Gene3D G3DSA:3.50.50.60 294 385 2.1E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 Pfam PF01494 FAD binding domain 22 368 2.8E-23 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 325 2.1E-19 T 22-04-2016 PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 341 2.1E-19 T 22-04-2016 PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 23 45 2.1E-19 T 22-04-2016 PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 177 192 2.1E-19 T 22-04-2016 PNUC_RS00770 2f0143cddccbe4a393815401073d17c8 424 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 324 337 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 PNUC_RS07550 fe4f834e22bd9e864d4e3023a83a4df1 782 PIRSF PIRSF006076 4 782 1.8E-239 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PNUC_RS07550 fe4f834e22bd9e864d4e3023a83a4df1 782 Pfam PF07244 Surface antigen variable number repeat 188 275 7.2E-19 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 PNUC_RS07550 fe4f834e22bd9e864d4e3023a83a4df1 782 Pfam PF07244 Surface antigen variable number repeat 104 184 9.3E-12 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 PNUC_RS07550 fe4f834e22bd9e864d4e3023a83a4df1 782 Pfam PF07244 Surface antigen variable number repeat 37 101 7.8E-7 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 PNUC_RS07550 fe4f834e22bd9e864d4e3023a83a4df1 782 Pfam PF07244 Surface antigen variable number repeat 279 356 2.0E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 PNUC_RS07550 fe4f834e22bd9e864d4e3023a83a4df1 782 Pfam PF07244 Surface antigen variable number repeat 359 433 3.2E-12 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 PNUC_RS07550 fe4f834e22bd9e864d4e3023a83a4df1 782 PANTHER PTHR12815:SF11 17 782 1.7E-217 T 22-04-2016 PNUC_RS07550 fe4f834e22bd9e864d4e3023a83a4df1 782 PANTHER PTHR12815 17 782 1.7E-217 T 22-04-2016 PNUC_RS07550 fe4f834e22bd9e864d4e3023a83a4df1 782 Pfam PF01103 Surface antigen 460 782 8.8E-60 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 PNUC_RS07550 fe4f834e22bd9e864d4e3023a83a4df1 782 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 15 782 24.281 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PNUC_RS07550 fe4f834e22bd9e864d4e3023a83a4df1 782 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 36 782 1.3E-247 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PNUC_RS05385 99e6392d2bd65220c09c1369721d1bcc 220 Pfam PF10263 SprT-like family 20 183 1.0E-15 T 22-04-2016 IPR006640 SprT-like PNUC_RS08975 e5dac3030cbf7cdd7910cc64ec99e541 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS08975 e5dac3030cbf7cdd7910cc64ec99e541 237 Pfam PF00005 ABC transporter 21 165 2.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS08975 e5dac3030cbf7cdd7910cc64ec99e541 237 PANTHER PTHR24220 6 237 4.8E-120 T 22-04-2016 PNUC_RS08975 e5dac3030cbf7cdd7910cc64ec99e541 237 PANTHER PTHR24220:SF568 6 237 4.8E-120 T 22-04-2016 PNUC_RS08975 e5dac3030cbf7cdd7910cc64ec99e541 237 Gene3D G3DSA:3.40.50.300 2 232 3.1E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08975 e5dac3030cbf7cdd7910cc64ec99e541 237 PIRSF PIRSF039137 1 237 2.2E-105 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 PNUC_RS08975 e5dac3030cbf7cdd7910cc64ec99e541 237 SMART SM00382 29 216 4.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS08975 e5dac3030cbf7cdd7910cc64ec99e541 237 SUPERFAMILY SSF52540 3 236 5.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 Gene3D G3DSA:1.10.390.10 315 462 2.4E-31 T 22-04-2016 PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 SUPERFAMILY SSF63737 6 199 3.4E-37 T 22-04-2016 PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 PANTHER PTHR11533 2 867 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 133 148 6.43E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 265 275 6.43E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 320 332 6.43E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 316 6.43E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 6.43E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 867 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 PANTHER PTHR11533:SF152 2 867 0.0 T 22-04-2016 PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 Gene3D G3DSA:1.25.50.10 549 867 6.0E-117 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 SUPERFAMILY SSF55486 214 461 1.15E-72 T 22-04-2016 PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 Pfam PF11940 Domain of unknown function (DUF3458) 469 825 1.2E-136 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PNUC_RS03480 b04e6be3b1900b6725b4241dff9e364b 869 Pfam PF01433 Peptidase family M1 56 395 2.2E-66 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PNUC_RS08235 e4fdda081c218fead53442cf95d6c70d 159 PANTHER PTHR11717:SF18 3 155 1.0E-26 T 22-04-2016 PNUC_RS08235 e4fdda081c218fead53442cf95d6c70d 159 SUPERFAMILY SSF52788 4 142 3.92E-36 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PNUC_RS08235 e4fdda081c218fead53442cf95d6c70d 159 PANTHER PTHR11717 3 155 1.0E-26 T 22-04-2016 PNUC_RS08235 e4fdda081c218fead53442cf95d6c70d 159 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 135 1.1E-11 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PNUC_RS08235 e4fdda081c218fead53442cf95d6c70d 159 Gene3D G3DSA:3.40.50.270 1 140 2.8E-36 T 22-04-2016 PNUC_RS08235 e4fdda081c218fead53442cf95d6c70d 159 SMART SM00226 4 142 2.1E-26 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PNUC_RS09705 33ca74ca9279e2c6d2cb3ed169f28c69 347 Gene3D G3DSA:3.90.1200.10 117 342 3.3E-69 T 22-04-2016 PNUC_RS09705 33ca74ca9279e2c6d2cb3ed169f28c69 347 PANTHER PTHR33540:SF1 30 347 2.5E-111 T 22-04-2016 PNUC_RS09705 33ca74ca9279e2c6d2cb3ed169f28c69 347 Gene3D G3DSA:3.30.200.20 16 112 2.7E-25 T 22-04-2016 PNUC_RS09705 33ca74ca9279e2c6d2cb3ed169f28c69 347 Pfam PF01636 Phosphotransferase enzyme family 42 260 3.3E-26 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase PNUC_RS09705 33ca74ca9279e2c6d2cb3ed169f28c69 347 PANTHER PTHR33540 30 347 2.5E-111 T 22-04-2016 PNUC_RS09705 33ca74ca9279e2c6d2cb3ed169f28c69 347 SUPERFAMILY SSF56112 19 340 9.91E-55 T 22-04-2016 IPR011009 Protein kinase-like domain PNUC_RS00020 d05058dcd44c4ba6a500d759b7c9104c 164 SUPERFAMILY SSF82199 16 156 4.32E-41 T 22-04-2016 PNUC_RS00020 d05058dcd44c4ba6a500d759b7c9104c 164 Pfam PF00856 SET domain 25 129 3.5E-14 T 22-04-2016 IPR001214 SET domain GO:0005515 PNUC_RS00020 d05058dcd44c4ba6a500d759b7c9104c 164 SMART SM00317 14 136 1.4E-25 T 22-04-2016 IPR001214 SET domain GO:0005515 PNUC_RS00020 d05058dcd44c4ba6a500d759b7c9104c 164 PANTHER PTHR22884:SF336 13 149 1.8E-33 T 22-04-2016 PNUC_RS00020 d05058dcd44c4ba6a500d759b7c9104c 164 PANTHER PTHR22884 13 149 1.8E-33 T 22-04-2016 PNUC_RS00020 d05058dcd44c4ba6a500d759b7c9104c 164 Gene3D G3DSA:2.170.270.10 16 158 3.1E-43 T 22-04-2016 PNUC_RS02570 27624a6902625951684f25853958b657 187 PRINTS PR01022 Outer membrane protein A signature 136 155 6.1E-5 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 PNUC_RS02570 27624a6902625951684f25853958b657 187 PRINTS PR01022 Outer membrane protein A signature 70 85 6.1E-5 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 PNUC_RS02570 27624a6902625951684f25853958b657 187 Pfam PF00691 OmpA family 82 176 2.1E-23 T 22-04-2016 IPR006665 OmpA-like domain PNUC_RS02570 27624a6902625951684f25853958b657 187 ProSitePatterns PS01068 OmpA-like domain. 114 158 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PNUC_RS02570 27624a6902625951684f25853958b657 187 Gene3D G3DSA:3.30.1330.60 71 183 1.7E-40 T 22-04-2016 IPR006665 OmpA-like domain PNUC_RS02570 27624a6902625951684f25853958b657 187 PRINTS PR01021 OMPA domain signature 82 104 4.5E-21 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PNUC_RS02570 27624a6902625951684f25853958b657 187 PRINTS PR01021 OMPA domain signature 112 127 4.5E-21 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PNUC_RS02570 27624a6902625951684f25853958b657 187 PRINTS PR01021 OMPA domain signature 127 143 4.5E-21 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PNUC_RS02570 27624a6902625951684f25853958b657 187 PANTHER PTHR30128 73 186 1.3E-45 T 22-04-2016 PNUC_RS02570 27624a6902625951684f25853958b657 187 SUPERFAMILY SSF103088 72 182 1.18E-36 T 22-04-2016 IPR006665 OmpA-like domain PNUC_RS05120 c3891ae263b90408a47eeeb02f6cada6 130 Pfam PF09842 Predicted membrane protein (DUF2069) 14 113 4.4E-30 T 22-04-2016 IPR018643 Protein of unknown function DUF2069, membrane PNUC_RS00480 70bd90ef793e8ed86108272774c3af3f 225 Gene3D G3DSA:1.10.760.10 44 158 2.7E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00480 70bd90ef793e8ed86108272774c3af3f 225 Gene3D G3DSA:1.10.760.10 159 225 4.9E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00480 70bd90ef793e8ed86108272774c3af3f 225 SUPERFAMILY SSF46626 137 223 2.82E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00480 70bd90ef793e8ed86108272774c3af3f 225 PIRSF PIRSF000005 10 225 1.3E-57 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 PNUC_RS00480 70bd90ef793e8ed86108272774c3af3f 225 SUPERFAMILY SSF46626 39 124 4.34E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00480 70bd90ef793e8ed86108272774c3af3f 225 PANTHER PTHR33751:SF3 58 225 6.6E-45 T 22-04-2016 PNUC_RS00480 70bd90ef793e8ed86108272774c3af3f 225 Pfam PF00034 Cytochrome c 44 125 1.7E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00480 70bd90ef793e8ed86108272774c3af3f 225 Pfam PF00034 Cytochrome c 157 222 2.0E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00480 70bd90ef793e8ed86108272774c3af3f 225 PANTHER PTHR33751 58 225 6.6E-45 T 22-04-2016 PNUC_RS03815 a894b2c152fea087ad1a15610cf759a5 708 Gene3D G3DSA:1.20.1050.40 30 152 1.0E-21 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal PNUC_RS03815 a894b2c152fea087ad1a15610cf759a5 708 PANTHER PTHR11804 15 707 1.2E-257 T 22-04-2016 PNUC_RS03815 a894b2c152fea087ad1a15610cf759a5 708 Gene3D G3DSA:1.10.1370.10 527 707 8.4E-129 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PNUC_RS03815 a894b2c152fea087ad1a15610cf759a5 708 Gene3D G3DSA:1.10.1370.10 155 368 8.4E-129 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PNUC_RS03815 a894b2c152fea087ad1a15610cf759a5 708 PANTHER PTHR11804:SF8 15 707 1.2E-257 T 22-04-2016 PNUC_RS03815 a894b2c152fea087ad1a15610cf759a5 708 SUPERFAMILY SSF55486 16 706 9.28E-181 T 22-04-2016 PNUC_RS03815 a894b2c152fea087ad1a15610cf759a5 708 Gene3D G3DSA:3.40.390.10 377 526 1.6E-51 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PNUC_RS03815 a894b2c152fea087ad1a15610cf759a5 708 Pfam PF01432 Peptidase family M3 236 705 8.7E-132 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 PNUC_RS10035 7dc2cbc6f3db42495265ece4dafa646c 284 Gene3D G3DSA:1.20.120.80 78 284 3.8E-61 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 PNUC_RS10035 7dc2cbc6f3db42495265ece4dafa646c 284 PANTHER PTHR11403:SF0 1 284 4.0E-84 T 22-04-2016 PNUC_RS10035 7dc2cbc6f3db42495265ece4dafa646c 284 Pfam PF00510 Cytochrome c oxidase subunit III 13 283 1.1E-53 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PNUC_RS10035 7dc2cbc6f3db42495265ece4dafa646c 284 PANTHER PTHR11403 1 284 4.0E-84 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 PNUC_RS10035 7dc2cbc6f3db42495265ece4dafa646c 284 Gene3D G3DSA:1.10.287.70 5 71 2.2E-12 T 22-04-2016 PNUC_RS10035 7dc2cbc6f3db42495265ece4dafa646c 284 SUPERFAMILY SSF81452 7 284 2.62E-76 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PNUC_RS01360 2c6b19933c446b7296ef5cef83ab91f1 349 Gene3D G3DSA:3.40.50.2000 199 327 3.2E-27 T 22-04-2016 PNUC_RS01360 2c6b19933c446b7296ef5cef83ab91f1 349 SUPERFAMILY SSF53756 14 348 1.21E-61 T 22-04-2016 PNUC_RS01360 2c6b19933c446b7296ef5cef83ab91f1 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 94 329 5.1E-42 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PNUC_RS01360 2c6b19933c446b7296ef5cef83ab91f1 349 PANTHER PTHR30160:SF8 11 309 1.7E-45 T 22-04-2016 PNUC_RS01360 2c6b19933c446b7296ef5cef83ab91f1 349 Gene3D G3DSA:3.40.50.2000 14 179 5.4E-27 T 22-04-2016 PNUC_RS01360 2c6b19933c446b7296ef5cef83ab91f1 349 PANTHER PTHR30160 11 309 1.7E-45 T 22-04-2016 PNUC_RS01360 2c6b19933c446b7296ef5cef83ab91f1 349 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 14 348 5.6E-92 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 Hamap MF_00015 LexA repressor [lexA]. 17 237 31.507 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 SUPERFAMILY SSF46785 17 83 3.51E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 TIGRFAM TIGR00498 lexA: repressor LexA 17 236 6.2E-70 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 Gene3D G3DSA:2.10.109.10 110 235 1.3E-41 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 Pfam PF01726 LexA DNA binding domain 17 79 3.8E-26 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 PANTHER PTHR33516 17 239 8.8E-86 T 22-04-2016 PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 PANTHER PTHR33516:SF2 17 239 8.8E-86 T 22-04-2016 PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 Gene3D G3DSA:1.10.10.10 17 83 6.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 Pfam PF00717 Peptidase S24-like 148 209 2.3E-14 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 145 155 1.6E-11 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 167 1.6E-11 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 184 196 1.6E-11 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PNUC_RS02195 95fff5f0d7265e4587410d15162a2695 239 SUPERFAMILY SSF51306 109 235 1.31E-34 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PNUC_RS08930 f4ac83b9f6d85fae5ce39ccefd96099e 296 Pfam PF00483 Nucleotidyl transferase 17 271 1.2E-29 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PNUC_RS08930 f4ac83b9f6d85fae5ce39ccefd96099e 296 PANTHER PTHR22572 12 289 1.1E-97 T 22-04-2016 PNUC_RS08930 f4ac83b9f6d85fae5ce39ccefd96099e 296 Gene3D G3DSA:3.90.550.10 10 281 1.6E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS08930 f4ac83b9f6d85fae5ce39ccefd96099e 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 10 271 2.8E-113 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 PNUC_RS08930 f4ac83b9f6d85fae5ce39ccefd96099e 296 PANTHER PTHR22572:SF14 12 289 1.1E-97 T 22-04-2016 PNUC_RS08930 f4ac83b9f6d85fae5ce39ccefd96099e 296 SUPERFAMILY SSF53448 10 283 3.25E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS02330 6eb3b1b0152da68f19d24de6241bff55 422 SUPERFAMILY SSF103473 15 415 2.22E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS02330 6eb3b1b0152da68f19d24de6241bff55 422 Pfam PF07690 Major Facilitator Superfamily 39 269 4.2E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS02330 6eb3b1b0152da68f19d24de6241bff55 422 TIGRFAM TIGR04259 oxa_formateAnti: oxalate/formate antiporter 19 419 6.6E-126 T 22-04-2016 IPR026355 Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021 PNUC_RS02330 6eb3b1b0152da68f19d24de6241bff55 422 PANTHER PTHR11360 14 408 1.4E-82 T 22-04-2016 PNUC_RS02330 6eb3b1b0152da68f19d24de6241bff55 422 Gene3D G3DSA:1.20.1250.20 224 415 6.6E-23 T 22-04-2016 PNUC_RS02330 6eb3b1b0152da68f19d24de6241bff55 422 Gene3D G3DSA:1.20.1250.20 19 202 2.9E-21 T 22-04-2016 PNUC_RS02330 6eb3b1b0152da68f19d24de6241bff55 422 PANTHER PTHR11360:SF3 14 408 1.4E-82 T 22-04-2016 PNUC_RS08555 75a945adf7fe7fdba5d62d76c3116947 272 PANTHER PTHR23024:SF163 8 196 4.4E-33 T 22-04-2016 PNUC_RS08555 75a945adf7fe7fdba5d62d76c3116947 272 PANTHER PTHR23024 8 196 4.4E-33 T 22-04-2016 PNUC_RS08555 75a945adf7fe7fdba5d62d76c3116947 272 Pfam PF07859 alpha/beta hydrolase fold 69 219 7.7E-11 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 PNUC_RS08555 75a945adf7fe7fdba5d62d76c3116947 272 SUPERFAMILY SSF53474 9 266 6.51E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS08555 75a945adf7fe7fdba5d62d76c3116947 272 Gene3D G3DSA:3.40.50.1820 26 266 2.5E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS05775 8cd0998b15d708e3d18ecc0eae5949f6 459 SUPERFAMILY SSF53850 55 333 1.45E-30 T 22-04-2016 PNUC_RS05775 8cd0998b15d708e3d18ecc0eae5949f6 459 PANTHER PTHR30024:SF13 284 389 3.5E-30 T 22-04-2016 PNUC_RS05775 8cd0998b15d708e3d18ecc0eae5949f6 459 PANTHER PTHR30024:SF13 19 264 3.5E-30 T 22-04-2016 PNUC_RS05775 8cd0998b15d708e3d18ecc0eae5949f6 459 Gene3D G3DSA:3.40.190.10 60 121 5.6E-4 T 22-04-2016 PNUC_RS05775 8cd0998b15d708e3d18ecc0eae5949f6 459 Gene3D G3DSA:3.40.190.10 162 274 1.6E-12 T 22-04-2016 PNUC_RS05775 8cd0998b15d708e3d18ecc0eae5949f6 459 PANTHER PTHR30024 284 389 3.5E-30 T 22-04-2016 PNUC_RS05775 8cd0998b15d708e3d18ecc0eae5949f6 459 PANTHER PTHR30024 19 264 3.5E-30 T 22-04-2016 PNUC_RS05775 8cd0998b15d708e3d18ecc0eae5949f6 459 Pfam PF16868 NMT1-like family 63 258 3.2E-12 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family PNUC_RS05250 6615f2d27f5b8ef56c55c3b0848a77a7 383 Gene3D G3DSA:3.10.580.10 234 377 2.3E-28 T 22-04-2016 PNUC_RS05250 6615f2d27f5b8ef56c55c3b0848a77a7 383 PANTHER PTHR33741 23 284 8.1E-23 T 22-04-2016 PNUC_RS05250 6615f2d27f5b8ef56c55c3b0848a77a7 383 Pfam PF04982 HPP family 59 175 3.2E-32 T 22-04-2016 IPR007065 HPP PNUC_RS05250 6615f2d27f5b8ef56c55c3b0848a77a7 383 Pfam PF00571 CBS domain 239 290 7.9E-11 T 22-04-2016 IPR000644 CBS domain PNUC_RS05250 6615f2d27f5b8ef56c55c3b0848a77a7 383 Pfam PF00571 CBS domain 322 376 3.6E-10 T 22-04-2016 IPR000644 CBS domain PNUC_RS05250 6615f2d27f5b8ef56c55c3b0848a77a7 383 SUPERFAMILY SSF54631 228 377 5.2E-32 T 22-04-2016 PNUC_RS05250 6615f2d27f5b8ef56c55c3b0848a77a7 383 SMART SM00116 329 377 4.4E-7 T 22-04-2016 IPR000644 CBS domain PNUC_RS05250 6615f2d27f5b8ef56c55c3b0848a77a7 383 SMART SM00116 245 293 1.0E-6 T 22-04-2016 IPR000644 CBS domain PNUC_RS07005 6bb83d850c681c8066cc558a13db115a 274 Gene3D G3DSA:3.40.190.10 12 156 7.0E-41 T 22-04-2016 PNUC_RS07005 6bb83d850c681c8066cc558a13db115a 274 Pfam PF12849 PBP superfamily domain 28 250 2.7E-26 T 22-04-2016 IPR024370 PBP domain PNUC_RS07005 6bb83d850c681c8066cc558a13db115a 274 PANTHER PTHR37945 12 272 1.1E-103 T 22-04-2016 PNUC_RS07005 6bb83d850c681c8066cc558a13db115a 274 SUPERFAMILY SSF53850 30 260 5.43E-30 T 22-04-2016 PNUC_RS07005 6bb83d850c681c8066cc558a13db115a 274 Gene3D G3DSA:3.40.190.10 192 272 3.6E-29 T 22-04-2016 PNUC_RS09960 1fd809e734cfd4d11bb6f6c017587d16 213 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 1 184 30.542 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PNUC_RS09960 1fd809e734cfd4d11bb6f6c017587d16 213 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 93 2.0E-39 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PNUC_RS09960 1fd809e734cfd4d11bb6f6c017587d16 213 Gene3D G3DSA:2.40.240.10 2 93 1.9E-31 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 PNUC_RS09960 1fd809e734cfd4d11bb6f6c017587d16 213 Pfam PF01386 Ribosomal L25p family 5 90 2.5E-22 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PNUC_RS09960 1fd809e734cfd4d11bb6f6c017587d16 213 Gene3D G3DSA:2.170.120.20 96 192 5.6E-27 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain PNUC_RS09960 1fd809e734cfd4d11bb6f6c017587d16 213 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 172 6.4E-41 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PNUC_RS09960 1fd809e734cfd4d11bb6f6c017587d16 213 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 181 8.3E-28 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain PNUC_RS09960 1fd809e734cfd4d11bb6f6c017587d16 213 PANTHER PTHR33284 5 212 1.8E-51 T 22-04-2016 PNUC_RS09960 1fd809e734cfd4d11bb6f6c017587d16 213 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 93 21.882 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PNUC_RS09960 1fd809e734cfd4d11bb6f6c017587d16 213 SUPERFAMILY SSF50715 2 190 2.96E-52 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 PNUC_RS09965 82db2849b69ee16d19991c4a1e37768c 196 PANTHER PTHR17224 3 195 1.8E-70 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PNUC_RS09965 82db2849b69ee16d19991c4a1e37768c 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 193 5.1E-56 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PNUC_RS09965 82db2849b69ee16d19991c4a1e37768c 196 SUPERFAMILY SSF53178 2 193 2.88E-63 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PNUC_RS09965 82db2849b69ee16d19991c4a1e37768c 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 186 34.528 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PNUC_RS09965 82db2849b69ee16d19991c4a1e37768c 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 PNUC_RS09965 82db2849b69ee16d19991c4a1e37768c 196 Gene3D G3DSA:3.40.50.1470 2 195 2.1E-68 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PNUC_RS09965 82db2849b69ee16d19991c4a1e37768c 196 Pfam PF01195 Peptidyl-tRNA hydrolase 4 190 7.1E-53 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PNUC_RS09965 82db2849b69ee16d19991c4a1e37768c 196 PANTHER PTHR17224:SF1 3 195 1.8E-70 T 22-04-2016 PNUC_RS07035 e8d7911140db5b84925ecc037ef661fa 426 SMART SM00487 20 222 6.1E-56 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PNUC_RS07035 e8d7911140db5b84925ecc037ef661fa 426 SMART SM00490 258 339 6.6E-29 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS07035 e8d7911140db5b84925ecc037ef661fa 426 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 423 49.312 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 PNUC_RS07035 e8d7911140db5b84925ecc037ef661fa 426 PANTHER PTHR24031:SF0 1 369 2.0E-182 T 22-04-2016 PNUC_RS07035 e8d7911140db5b84925ecc037ef661fa 426 SUPERFAMILY SSF52540 76 360 2.42E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07035 e8d7911140db5b84925ecc037ef661fa 426 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PNUC_RS07035 e8d7911140db5b84925ecc037ef661fa 426 Gene3D G3DSA:3.40.50.300 3 211 9.0E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07035 e8d7911140db5b84925ecc037ef661fa 426 PANTHER PTHR24031 1 369 2.0E-182 T 22-04-2016 PNUC_RS07035 e8d7911140db5b84925ecc037ef661fa 426 Gene3D G3DSA:3.40.50.300 212 370 4.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07035 e8d7911140db5b84925ecc037ef661fa 426 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.5E-50 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PNUC_RS07035 e8d7911140db5b84925ecc037ef661fa 426 Pfam PF00271 Helicase conserved C-terminal domain 234 339 5.5E-27 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS07885 961060693eb920754181ec24785f5ed9 433 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 21 317 3.9E-26 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family PNUC_RS07885 961060693eb920754181ec24785f5ed9 433 SUPERFAMILY SSF53850 36 317 7.68E-43 T 22-04-2016 PNUC_RS07885 961060693eb920754181ec24785f5ed9 433 Gene3D G3DSA:3.40.190.10 139 256 4.4E-21 T 22-04-2016 PNUC_RS07885 961060693eb920754181ec24785f5ed9 433 PANTHER PTHR30024 268 419 7.6E-38 T 22-04-2016 PNUC_RS07885 961060693eb920754181ec24785f5ed9 433 PANTHER PTHR30024 1 247 7.6E-38 T 22-04-2016 PNUC_RS07885 961060693eb920754181ec24785f5ed9 433 Gene3D G3DSA:3.40.190.10 38 119 3.9E-14 T 22-04-2016 PNUC_RS07885 961060693eb920754181ec24785f5ed9 433 Gene3D G3DSA:3.40.190.10 257 318 3.9E-14 T 22-04-2016 PNUC_RS07885 961060693eb920754181ec24785f5ed9 433 PANTHER PTHR30024:SF13 268 419 7.6E-38 T 22-04-2016 PNUC_RS07885 961060693eb920754181ec24785f5ed9 433 PANTHER PTHR30024:SF13 1 247 7.6E-38 T 22-04-2016 PNUC_RS07885 961060693eb920754181ec24785f5ed9 433 Pfam PF16868 NMT1-like family 42 296 3.9E-25 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family PNUC_RS01525 41beac3b2980a2c78a144d4f33b0380f 161 Gene3D G3DSA:3.30.70.990 9 94 1.9E-28 T 22-04-2016 PNUC_RS01525 41beac3b2980a2c78a144d4f33b0380f 161 SUPERFAMILY SSF89963 89 161 6.02E-26 T 22-04-2016 IPR007551 Protein of unknown function DUF520 PNUC_RS01525 41beac3b2980a2c78a144d4f33b0380f 161 PANTHER PTHR30476:SF0 1 161 1.9E-70 T 22-04-2016 PNUC_RS01525 41beac3b2980a2c78a144d4f33b0380f 161 PANTHER PTHR30476 1 161 1.9E-70 T 22-04-2016 PNUC_RS01525 41beac3b2980a2c78a144d4f33b0380f 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 26.88 T 22-04-2016 IPR007551 Protein of unknown function DUF520 PNUC_RS01525 41beac3b2980a2c78a144d4f33b0380f 161 SUPERFAMILY SSF89963 2 87 3.66E-29 T 22-04-2016 IPR007551 Protein of unknown function DUF520 PNUC_RS01525 41beac3b2980a2c78a144d4f33b0380f 161 Gene3D G3DSA:3.30.70.860 95 161 1.8E-31 T 22-04-2016 PNUC_RS01525 41beac3b2980a2c78a144d4f33b0380f 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 5.0E-62 T 22-04-2016 IPR007551 Protein of unknown function DUF520 PNUC_RS04000 d40e4ce49c3105403de0e2c4f7a849d6 356 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 351 2.2E-133 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PNUC_RS04000 d40e4ce49c3105403de0e2c4f7a849d6 356 SUPERFAMILY SSF53659 1 355 3.64E-123 T 22-04-2016 PNUC_RS04000 d40e4ce49c3105403de0e2c4f7a849d6 356 Gene3D G3DSA:3.40.718.10 2 355 7.6E-132 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PNUC_RS04000 d40e4ce49c3105403de0e2c4f7a849d6 356 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PNUC_RS04000 d40e4ce49c3105403de0e2c4f7a849d6 356 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 350 4.3E-149 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 PNUC_RS04000 d40e4ce49c3105403de0e2c4f7a849d6 356 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 355 51.416 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 PNUC_RS04000 d40e4ce49c3105403de0e2c4f7a849d6 356 PANTHER PTHR11835:SF35 1 356 5.4E-200 T 22-04-2016 PNUC_RS04000 d40e4ce49c3105403de0e2c4f7a849d6 356 SMART SM01329 2 351 9.6E-209 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PNUC_RS04000 d40e4ce49c3105403de0e2c4f7a849d6 356 PANTHER PTHR11835 1 356 5.4E-200 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PNUC_RS03925 16a41715071fd967df42b7a285927ccd 399 SUPERFAMILY SSF53383 10 398 4.62E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS03925 16a41715071fd967df42b7a285927ccd 399 Gene3D G3DSA:3.90.1150.10 284 398 1.1E-17 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS03925 16a41715071fd967df42b7a285927ccd 399 PANTHER PTHR11751 13 399 1.2E-126 T 22-04-2016 PNUC_RS03925 16a41715071fd967df42b7a285927ccd 399 PANTHER PTHR11751:SF301 13 399 1.2E-126 T 22-04-2016 PNUC_RS03925 16a41715071fd967df42b7a285927ccd 399 Pfam PF00155 Aminotransferase class I and II 34 396 5.1E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PNUC_RS03925 16a41715071fd967df42b7a285927ccd 399 Gene3D G3DSA:3.40.640.10 51 283 6.2E-70 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS08935 e22ba4bbec6e36c4a8711d41802e1d64 75 Pfam PF01206 Sulfurtransferase TusA 6 73 3.1E-20 T 22-04-2016 IPR001455 TusA-like domain PNUC_RS08935 e22ba4bbec6e36c4a8711d41802e1d64 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 22-04-2016 IPR001455 TusA-like domain PNUC_RS08935 e22ba4bbec6e36c4a8711d41802e1d64 75 PANTHER PTHR33279 4 75 1.8E-17 T 22-04-2016 PNUC_RS08935 e22ba4bbec6e36c4a8711d41802e1d64 75 SUPERFAMILY SSF64307 5 74 3.01E-23 T 22-04-2016 IPR001455 TusA-like domain PNUC_RS08935 e22ba4bbec6e36c4a8711d41802e1d64 75 Gene3D G3DSA:3.30.110.40 4 74 9.8E-28 T 22-04-2016 IPR001455 TusA-like domain PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 PANTHER PTHR22942 19 350 2.8E-204 T 22-04-2016 PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 SMART SM00382 72 243 8.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 Gene3D G3DSA:3.40.50.300 47 282 4.5E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 Gene3D G3DSA:3.30.250.10 283 341 8.7E-32 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 18 339 5.4E-173 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 SUPERFAMILY SSF54752 283 341 5.36E-23 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 Hamap MF_00268 Protein RecA [recA]. 19 344 52.232 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 SUPERFAMILY SSF52540 17 282 1.53E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 PANTHER PTHR22942:SF1 19 350 2.8E-204 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 ProSitePatterns PS00321 recA signature. 228 236 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 Pfam PF00154 recA bacterial DNA recombination protein 21 283 7.9E-145 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 PRINTS PR00142 RecA protein signature 180 209 5.0E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 PRINTS PR00142 RecA protein signature 225 253 5.0E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 PRINTS PR00142 RecA protein signature 108 137 5.0E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 PRINTS PR00142 RecA protein signature 142 171 5.0E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 PRINTS PR00142 RecA protein signature 258 287 5.0E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PNUC_RS09510 00ebdab740f757b24d77da6416fd6a38 361 PRINTS PR00142 RecA protein signature 312 329 5.0E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PNUC_RS06905 bf3a35e2d74f1315cfaba46a1f7670a3 187 Gene3D G3DSA:1.20.1550.10 16 98 1.2E-10 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain PNUC_RS06905 bf3a35e2d74f1315cfaba46a1f7670a3 187 Pfam PF02600 Disulfide bond formation protein DsbB 16 95 2.2E-11 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 PNUC_RS06905 bf3a35e2d74f1315cfaba46a1f7670a3 187 SUPERFAMILY SSF158442 15 124 5.1E-19 T 22-04-2016 PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 435 2.0E-166 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 SUPERFAMILY SSF52540 4 163 5.79E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 PIRSF PIRSF006485 1 444 4.7E-166 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 PANTHER PTHR11649 1 435 3.7E-138 T 22-04-2016 PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 Hamap MF_00195 GTPase Der [der]. 2 439 36.794 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.9E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.9E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 SUPERFAMILY SSF52540 138 442 4.69E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 Gene3D G3DSA:3.40.50.300 178 361 4.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 Gene3D G3DSA:3.40.50.300 3 164 1.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.7E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 Pfam PF01926 50S ribosome-binding GTPase 182 300 4.1E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 Gene3D G3DSA:3.30.300.20 362 436 8.5E-22 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 435 6.2E-23 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 PANTHER PTHR11649:SF5 1 435 3.7E-138 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 180 345 3.8E-28 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PNUC_RS06750 64213423bf6cf4a0e1088ae98e9482e9 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 1.2E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 Gene3D G3DSA:3.40.1160.10 3 259 3.7E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 Hamap MF_00456 Glutamate 5-kinase [proB]. 7 260 35.314 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 PANTHER PTHR11063 5 255 2.3E-73 T 22-04-2016 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 ProSitePatterns PS00902 Glutamate 5-kinase signature. 209 226 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 SUPERFAMILY SSF53633 7 257 7.85E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 PIRSF PIRSF000729 2 260 3.7E-91 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 PANTHER PTHR11063:SF12 5 255 2.3E-73 T 22-04-2016 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 TIGRFAM TIGR01027 proB: glutamate 5-kinase 7 258 5.0E-92 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 PRINTS PR00474 Glutamate 5-kinase family signature 150 177 2.5E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 PRINTS PR00474 Glutamate 5-kinase family signature 78 106 2.5E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 PRINTS PR00474 Glutamate 5-kinase family signature 211 231 2.5E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 PRINTS PR00474 Glutamate 5-kinase family signature 118 139 2.5E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 PRINTS PR00474 Glutamate 5-kinase family signature 44 58 2.5E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PNUC_RS01055 0fffdef99f99e85dec619f161c7e2dad 260 Pfam PF00696 Amino acid kinase family 7 236 1.0E-40 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS09640 571e38db14cdf74568a53db4815d465b 420 Pfam PF07399 Putative Na+/H+ antiporter 7 420 4.7E-172 T 22-04-2016 IPR009978 Putative Na+/H+ antiporter PNUC_RS10385 c43f83cad37d10d5addaf9ca2c28b270 222 PANTHER PTHR19278 8 222 3.0E-87 T 22-04-2016 PNUC_RS10385 c43f83cad37d10d5addaf9ca2c28b270 222 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 192 1.5E-51 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS10385 c43f83cad37d10d5addaf9ca2c28b270 222 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 222 32.051 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 PNUC_RS10385 c43f83cad37d10d5addaf9ca2c28b270 222 SUPERFAMILY SSF53271 10 199 9.05E-43 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS10385 c43f83cad37d10d5addaf9ca2c28b270 222 PANTHER PTHR19278:SF36 8 222 3.0E-87 T 22-04-2016 PNUC_RS10385 c43f83cad37d10d5addaf9ca2c28b270 222 Pfam PF00156 Phosphoribosyl transferase domain 45 158 1.8E-14 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PNUC_RS10385 c43f83cad37d10d5addaf9ca2c28b270 222 Gene3D G3DSA:3.40.50.2020 10 221 5.5E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS10615 c80feb136645dce1fa5e9808f84df446 190 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 49 165 1.4E-8 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain PNUC_RS10615 c80feb136645dce1fa5e9808f84df446 190 Gene3D G3DSA:3.30.530.20 41 180 2.7E-8 T 22-04-2016 IPR023393 START-like domain PNUC_RS10615 c80feb136645dce1fa5e9808f84df446 190 SUPERFAMILY SSF55961 41 180 1.93E-19 T 22-04-2016 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 SUPERFAMILY SSF88723 3 167 3.08E-57 T 22-04-2016 IPR029060 PIN domain-like PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 Gene3D G3DSA:1.10.150.20 727 832 1.8E-35 T 22-04-2016 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 251 3.1E-22 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 Gene3D G3DSA:1.20.1060.10 558 678 3.7E-38 T 22-04-2016 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 828 839 1.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 745 758 1.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 890 903 1.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 670 692 1.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 1.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 769 794 1.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 708 1.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 715 738 1.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 860 876 1.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 SUPERFAMILY SSF47807 168 285 7.33E-29 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 Gene3D G3DSA:3.30.420.10 346 557 4.6E-78 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 Pfam PF01612 3'-5' exonuclease 348 532 7.2E-37 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 SUPERFAMILY SSF56672 537 943 2.22E-155 T 22-04-2016 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 SMART SM00482 701 907 1.0E-116 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 SMART SM00279 170 205 1.2E-8 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PANTHER PTHR10133 1 281 0.0 T 22-04-2016 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PANTHER PTHR10133 334 942 0.0 T 22-04-2016 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 ProSitePatterns PS00447 DNA polymerase family A signature. 769 788 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 TIGRFAM TIGR00593 pola: DNA polymerase I 6 943 5.8E-279 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 Gene3D G3DSA:3.30.70.370 679 726 1.5E-67 T 22-04-2016 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 Gene3D G3DSA:3.30.70.370 833 943 1.5E-67 T 22-04-2016 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 Gene3D G3DSA:1.10.150.20 183 242 8.9E-22 T 22-04-2016 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 167 1.0E-54 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 SMART SM00474 348 532 2.9E-33 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PANTHER PTHR10133:SF27 1 281 0.0 T 22-04-2016 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 PANTHER PTHR10133:SF27 334 942 0.0 T 22-04-2016 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 SMART SM00475 3 261 1.7E-116 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 Gene3D G3DSA:3.40.50.1010 5 182 1.5E-70 T 22-04-2016 IPR029060 PIN domain-like PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 SUPERFAMILY SSF53098 351 532 1.31E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS08900 7792a9431b41e4366e611f72411e2e0f 943 Pfam PF00476 DNA polymerase family A 567 941 7.2E-153 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS06645 4e5c96b7ca5a9c4f247645e1360f5842 648 Pfam PF01144 Coenzyme A transferase 2 244 9.7E-34 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS06645 4e5c96b7ca5a9c4f247645e1360f5842 648 SMART SM00882 283 491 2.6E-4 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS06645 4e5c96b7ca5a9c4f247645e1360f5842 648 SMART SM00882 1 245 4.8E-68 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS06645 4e5c96b7ca5a9c4f247645e1360f5842 648 PANTHER PTHR13707 3 511 2.6E-244 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PNUC_RS06645 4e5c96b7ca5a9c4f247645e1360f5842 648 SUPERFAMILY SSF100950 277 520 1.14E-77 T 22-04-2016 PNUC_RS06645 4e5c96b7ca5a9c4f247645e1360f5842 648 Gene3D G3DSA:3.40.810.20 281 503 9.7E-64 T 22-04-2016 PNUC_RS06645 4e5c96b7ca5a9c4f247645e1360f5842 648 Gene3D G3DSA:3.40.1080.10 2 244 9.1E-72 T 22-04-2016 PNUC_RS06645 4e5c96b7ca5a9c4f247645e1360f5842 648 SUPERFAMILY SSF100950 2 256 2.51E-87 T 22-04-2016 PNUC_RS06645 4e5c96b7ca5a9c4f247645e1360f5842 648 PANTHER PTHR13707:SF38 3 511 2.6E-244 T 22-04-2016 PNUC_RS00395 9235016c110c8088fb468649804befc1 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 117 2.2E-36 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00395 9235016c110c8088fb468649804befc1 117 SUPERFAMILY SSF53137 3 115 6.54E-47 T 22-04-2016 PNUC_RS00395 9235016c110c8088fb468649804befc1 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 24.444 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00395 9235016c110c8088fb468649804befc1 117 PANTHER PTHR12899 1 117 2.4E-36 T 22-04-2016 PNUC_RS00395 9235016c110c8088fb468649804befc1 117 Gene3D G3DSA:3.30.420.100 22 117 1.0E-33 T 22-04-2016 PNUC_RS00395 9235016c110c8088fb468649804befc1 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 2 117 2.0E-36 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 PANTHER PTHR11236 125 473 8.1E-122 T 22-04-2016 PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 SUPERFAMILY SSF56322 38 390 1.18E-95 T 22-04-2016 IPR005801 ADC synthase GO:0009058 PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 Pfam PF01063 Amino-transferase class IV 396 603 4.8E-35 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 Pfam PF00425 chorismate binding enzyme 131 384 8.9E-80 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 Gene3D G3DSA:3.20.10.10 495 601 9.5E-28 T 22-04-2016 PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 PANTHER PTHR11236:SF18 125 473 8.1E-122 T 22-04-2016 PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 SUPERFAMILY SSF56752 334 603 4.71E-42 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 Gene3D G3DSA:3.30.470.10 396 463 7.5E-8 T 22-04-2016 PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 PRINTS PR00095 Anthranilate synthase component I signature 226 239 9.84E-11 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 PRINTS PR00095 Anthranilate synthase component I signature 240 253 9.84E-11 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 PRINTS PR00095 Anthranilate synthase component I signature 320 334 9.84E-11 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 PRINTS PR00095 Anthranilate synthase component I signature 335 349 9.84E-11 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PNUC_RS03890 cd97afaf503edeb632599b16a13e5b88 607 Gene3D G3DSA:3.60.120.10 55 390 2.4E-107 T 22-04-2016 IPR005801 ADC synthase GO:0009058 PNUC_RS01625 8cdc80b8b2530f6aa30168cdc4592965 345 PANTHER PTHR30160:SF1 178 345 4.6E-14 T 22-04-2016 PNUC_RS01625 8cdc80b8b2530f6aa30168cdc4592965 345 SUPERFAMILY SSF53756 10 342 3.92E-49 T 22-04-2016 PNUC_RS01625 8cdc80b8b2530f6aa30168cdc4592965 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 176 317 2.7E-18 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PNUC_RS01625 8cdc80b8b2530f6aa30168cdc4592965 345 Gene3D G3DSA:3.40.50.2000 174 342 3.7E-32 T 22-04-2016 PNUC_RS01625 8cdc80b8b2530f6aa30168cdc4592965 345 Gene3D G3DSA:3.40.50.2000 15 129 1.8E-7 T 22-04-2016 PNUC_RS01625 8cdc80b8b2530f6aa30168cdc4592965 345 PANTHER PTHR30160 178 345 4.6E-14 T 22-04-2016 PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 Pfam PF00989 PAS fold 329 443 1.1E-12 T 22-04-2016 IPR013767 PAS fold GO:0006355 PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 Pfam PF00512 His Kinase A (phospho-acceptor) domain 600 667 1.6E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 716 837 4.8E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 SMART SM00091 326 394 6.8E-10 T 22-04-2016 IPR000014 PAS domain PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 SMART SM00091 458 528 35.0 T 22-04-2016 IPR000014 PAS domain PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 PANTHER PTHR24423 312 840 1.4E-72 T 22-04-2016 PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 Gene3D G3DSA:3.30.450.20 444 575 1.7E-9 T 22-04-2016 PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 SUPERFAMILY SSF55785 443 575 2.44E-10 T 22-04-2016 IPR000014 PAS domain PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 SMART SM00387 713 838 1.0E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 SUPERFAMILY SSF55785 315 444 1.01E-22 T 22-04-2016 IPR000014 PAS domain PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 SMART SM00388 599 671 8.9E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 763 777 8.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 822 835 8.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 781 791 8.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 792 810 8.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 SUPERFAMILY SSF47384 592 668 5.1E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 Gene3D G3DSA:3.30.450.20 315 443 7.5E-22 T 22-04-2016 PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 325 453 3.4E-22 T 22-04-2016 IPR000014 PAS domain PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 SUPERFAMILY SSF55874 662 838 1.07E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 Pfam PF13188 PAS domain 458 501 0.015 T 22-04-2016 IPR000014 PAS domain PNUC_RS03830 db65e8744d9ddc96d6d54d1bb0ab2dff 845 Gene3D G3DSA:3.30.565.10 671 837 1.6E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS05600 156f7d0b4c4718ceeef9bebc250b1abd 258 Gene3D G3DSA:3.40.50.300 5 253 2.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05600 156f7d0b4c4718ceeef9bebc250b1abd 258 SMART SM00382 35 224 1.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS05600 156f7d0b4c4718ceeef9bebc250b1abd 258 PANTHER PTHR24220:SF483 12 250 1.2E-82 T 22-04-2016 PNUC_RS05600 156f7d0b4c4718ceeef9bebc250b1abd 258 Pfam PF00005 ABC transporter 27 175 5.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS05600 156f7d0b4c4718ceeef9bebc250b1abd 258 SUPERFAMILY SSF52540 11 248 1.84E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05600 156f7d0b4c4718ceeef9bebc250b1abd 258 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS05600 156f7d0b4c4718ceeef9bebc250b1abd 258 PANTHER PTHR24220 12 250 1.2E-82 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 SUPERFAMILY SSF81653 125 213 4.18E-19 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 691 40.314 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 319 325 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 SUPERFAMILY SSF56784 384 416 1.43E-37 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 SUPERFAMILY SSF56784 305 329 1.43E-37 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 SUPERFAMILY SSF56784 447 571 1.43E-37 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 Gene3D G3DSA:3.40.1110.10 328 454 2.8E-52 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 PANTHER PTHR24093 8 599 0.0 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 PANTHER PTHR24093 637 691 0.0 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 SUPERFAMILY SSF81665 214 311 1.29E-12 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 SUPERFAMILY SSF81665 30 103 1.29E-12 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 Gene3D G3DSA:3.40.50.1000 455 575 2.9E-36 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 688 0.0 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 475 485 3.4E-24 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 317 331 3.4E-24 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 563 3.4E-24 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 547 3.4E-24 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 3.4E-24 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 PANTHER PTHR24093:SF49 8 599 0.0 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 PANTHER PTHR24093:SF49 637 691 0.0 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 Pfam PF00702 haloacid dehalogenase-like hydrolase 313 542 7.0E-32 T 22-04-2016 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 Gene3D G3DSA:2.70.150.10 50 214 9.9E-21 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 352 2.6E-29 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 384 613 5.9E-48 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 PNUC_RS08680 5b12e65b1fe6480375e0c3bf03ba44cc 691 Pfam PF00122 E1-E2 ATPase 72 308 1.1E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PNUC_RS08455 3bc78a2b652cf6f964a6148774dc749c 622 Gene3D G3DSA:3.60.110.10 315 532 3.8E-32 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS08455 3bc78a2b652cf6f964a6148774dc749c 622 Pfam PF00795 Carbon-nitrogen hydrolase 319 543 3.0E-16 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS08455 3bc78a2b652cf6f964a6148774dc749c 622 Pfam PF00795 Carbon-nitrogen hydrolase 25 273 1.9E-27 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS08455 3bc78a2b652cf6f964a6148774dc749c 622 PANTHER PTHR23088 9 300 3.6E-37 T 22-04-2016 PNUC_RS08455 3bc78a2b652cf6f964a6148774dc749c 622 SUPERFAMILY SSF56317 315 542 2.35E-30 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS08455 3bc78a2b652cf6f964a6148774dc749c 622 Gene3D G3DSA:3.60.110.10 24 296 9.4E-48 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS08455 3bc78a2b652cf6f964a6148774dc749c 622 SUPERFAMILY SSF56317 25 294 1.96E-42 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS07200 84c6a55c8c7b0c1184bc285e6b295dca 366 SUPERFAMILY SSF51395 5 365 1.92E-121 T 22-04-2016 PNUC_RS07200 84c6a55c8c7b0c1184bc285e6b295dca 366 Gene3D G3DSA:3.20.20.70 5 365 1.2E-129 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS07200 84c6a55c8c7b0c1184bc285e6b295dca 366 PANTHER PTHR22893 5 366 3.0E-180 T 22-04-2016 PNUC_RS07200 84c6a55c8c7b0c1184bc285e6b295dca 366 PANTHER PTHR22893:SF14 5 366 3.0E-180 T 22-04-2016 PNUC_RS07200 84c6a55c8c7b0c1184bc285e6b295dca 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 345 6.9E-91 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 SMART SM00388 206 272 9.0E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 Gene3D G3DSA:1.10.287.130 197 257 6.9E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 Pfam PF11808 Domain of unknown function (DUF3329) 10 89 5.9E-7 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 SMART SM00387 316 429 1.7E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 PANTHER PTHR24423 45 431 6.0E-109 T 22-04-2016 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 425 5.0E-124 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 SUPERFAMILY SSF47384 192 272 1.55E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 SUPERFAMILY SSF55874 261 427 3.2E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 Gene3D G3DSA:3.30.565.10 258 428 1.2E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 428 5.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 271 1.4E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 SUPERFAMILY SSF55785 84 136 2.51E-5 T 22-04-2016 IPR000014 PAS domain PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 Gene3D G3DSA:3.30.450.20 94 160 9.7E-6 T 22-04-2016 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 PANTHER PTHR24423:SF554 45 431 6.0E-109 T 22-04-2016 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 4.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 4.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 4.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS08320 06c57362b26fb55004d4c6ff2eb9bc0a 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 4.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 Gene3D G3DSA:3.30.70.20 291 316 3.5E-5 T 22-04-2016 PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 Gene3D G3DSA:3.30.70.20 568 611 3.8E-12 T 22-04-2016 PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 Gene3D G3DSA:3.30.70.20 612 651 1.7E-7 T 22-04-2016 PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 PANTHER PTHR24960 241 371 1.1E-59 T 22-04-2016 PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 PANTHER PTHR24960 566 696 1.1E-59 T 22-04-2016 PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 Pfam PF12838 4Fe-4S dicluster domain 311 357 1.5E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 SUPERFAMILY SSF54862 284 364 2.26E-45 T 22-04-2016 PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 SUPERFAMILY SSF54862 572 671 2.26E-45 T 22-04-2016 PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 Pfam PF00037 4Fe-4S binding domain 185 206 1.3E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 SUPERFAMILY SSF54862 176 235 4.54E-14 T 22-04-2016 PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 Pfam PF13187 4Fe-4S dicluster domain 573 619 7.8E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 Gene3D G3DSA:3.30.70.20 317 361 9.7E-17 T 22-04-2016 PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 605 616 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 343 354 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 574 585 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 190 201 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 PANTHER PTHR24960:SF43 241 371 1.1E-59 T 22-04-2016 PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 PANTHER PTHR24960:SF43 566 696 1.1E-59 T 22-04-2016 PNUC_RS07335 6e7a00fa2d35eae542abebb5563d234a 696 Gene3D G3DSA:3.30.70.20 185 242 4.5E-13 T 22-04-2016 PNUC_RS01045 f514d12dd5ef2b85ff1c0a40504973cc 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 6.5E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS01045 f514d12dd5ef2b85ff1c0a40504973cc 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 6.5E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS01045 f514d12dd5ef2b85ff1c0a40504973cc 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 6.5E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS01045 f514d12dd5ef2b85ff1c0a40504973cc 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 9.5E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS01045 f514d12dd5ef2b85ff1c0a40504973cc 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS01045 f514d12dd5ef2b85ff1c0a40504973cc 86 Gene3D G3DSA:2.40.50.100 20 83 1.8E-29 T 22-04-2016 PNUC_RS01045 f514d12dd5ef2b85ff1c0a40504973cc 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.248 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS01045 f514d12dd5ef2b85ff1c0a40504973cc 86 Pfam PF01016 Ribosomal L27 protein 2 81 5.3E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS01045 f514d12dd5ef2b85ff1c0a40504973cc 86 PANTHER PTHR15893 1 85 7.8E-44 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS01045 f514d12dd5ef2b85ff1c0a40504973cc 86 SUPERFAMILY SSF110324 2 79 2.06E-32 T 22-04-2016 PNUC_RS01045 f514d12dd5ef2b85ff1c0a40504973cc 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 3.0E-14 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS05115 5bf842ca0b71c39b926e8b2c6e7dc6fc 202 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 6 196 1.6E-48 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 PNUC_RS05115 5bf842ca0b71c39b926e8b2c6e7dc6fc 202 SUPERFAMILY SSF52218 5 197 9.7E-59 T 22-04-2016 IPR029039 Flavoprotein-like domain PNUC_RS05115 5bf842ca0b71c39b926e8b2c6e7dc6fc 202 Gene3D G3DSA:3.40.50.360 3 199 6.0E-68 T 22-04-2016 IPR029039 Flavoprotein-like domain PNUC_RS05115 5bf842ca0b71c39b926e8b2c6e7dc6fc 202 ProSitePatterns PS00201 Flavodoxin signature. 8 24 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 PNUC_RS05115 5bf842ca0b71c39b926e8b2c6e7dc6fc 202 PANTHER PTHR30546 6 199 7.6E-74 T 22-04-2016 PNUC_RS01250 c1994e3ed57f8245e950c0b8dd3adf70 429 PANTHER PTHR11063 1 428 7.4E-172 T 22-04-2016 PNUC_RS01250 c1994e3ed57f8245e950c0b8dd3adf70 429 Pfam PF00171 Aldehyde dehydrogenase family 10 289 1.8E-17 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PNUC_RS01250 c1994e3ed57f8245e950c0b8dd3adf70 429 Pfam PF00171 Aldehyde dehydrogenase family 317 385 1.5E-6 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PNUC_RS01250 c1994e3ed57f8245e950c0b8dd3adf70 429 Gene3D G3DSA:3.40.309.10 233 386 1.8E-43 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PNUC_RS01250 c1994e3ed57f8245e950c0b8dd3adf70 429 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 335 357 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PNUC_RS01250 c1994e3ed57f8245e950c0b8dd3adf70 429 PIRSF PIRSF000151 5 429 9.2E-170 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PNUC_RS01250 c1994e3ed57f8245e950c0b8dd3adf70 429 PANTHER PTHR11063:SF8 1 428 7.4E-172 T 22-04-2016 PNUC_RS01250 c1994e3ed57f8245e950c0b8dd3adf70 429 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 20 418 3.3E-150 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PNUC_RS01250 c1994e3ed57f8245e950c0b8dd3adf70 429 Gene3D G3DSA:3.40.605.10 387 428 7.6E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PNUC_RS01250 c1994e3ed57f8245e950c0b8dd3adf70 429 Gene3D G3DSA:3.40.605.10 4 231 7.6E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PNUC_RS01250 c1994e3ed57f8245e950c0b8dd3adf70 429 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 12 428 40.34 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PNUC_RS01250 c1994e3ed57f8245e950c0b8dd3adf70 429 SUPERFAMILY SSF53720 11 428 1.09E-114 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PNUC_RS06495 73fe7dadd7dece7c37137d5b7f5f470c 622 SUPERFAMILY SSF53850 405 617 9.59E-110 T 22-04-2016 PNUC_RS06495 73fe7dadd7dece7c37137d5b7f5f470c 622 SUPERFAMILY SSF53850 54 374 9.59E-110 T 22-04-2016 PNUC_RS06495 73fe7dadd7dece7c37137d5b7f5f470c 622 Gene3D G3DSA:3.10.105.10 338 375 1.7E-51 T 22-04-2016 PNUC_RS06495 73fe7dadd7dece7c37137d5b7f5f470c 622 Gene3D G3DSA:3.10.105.10 414 586 1.7E-51 T 22-04-2016 PNUC_RS06495 73fe7dadd7dece7c37137d5b7f5f470c 622 PANTHER PTHR30290 2 371 2.3E-151 T 22-04-2016 PNUC_RS06495 73fe7dadd7dece7c37137d5b7f5f470c 622 PANTHER PTHR30290 406 617 2.3E-151 T 22-04-2016 PNUC_RS06495 73fe7dadd7dece7c37137d5b7f5f470c 622 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 106 531 7.2E-74 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain PNUC_RS06495 73fe7dadd7dece7c37137d5b7f5f470c 622 PANTHER PTHR30290:SF2 2 371 2.3E-151 T 22-04-2016 PNUC_RS06495 73fe7dadd7dece7c37137d5b7f5f470c 622 PANTHER PTHR30290:SF2 406 617 2.3E-151 T 22-04-2016 PNUC_RS06495 73fe7dadd7dece7c37137d5b7f5f470c 622 PIRSF PIRSF002741 8 621 2.2E-96 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PNUC_RS06495 73fe7dadd7dece7c37137d5b7f5f470c 622 Gene3D G3DSA:3.40.190.10 166 337 3.8E-28 T 22-04-2016 PNUC_RS09125 2069841417cbe0e725265db4c6273da8 88 Gene3D G3DSA:1.20.58.110 1 86 7.3E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS09125 2069841417cbe0e725265db4c6273da8 88 PANTHER PTHR33398 1 88 1.0E-27 T 22-04-2016 PNUC_RS09125 2069841417cbe0e725265db4c6273da8 88 Pfam PF01649 Ribosomal protein S20 2 84 8.6E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS09125 2069841417cbe0e725265db4c6273da8 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 8.0E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS09125 2069841417cbe0e725265db4c6273da8 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 18 88 3.0E-13 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS09125 2069841417cbe0e725265db4c6273da8 88 SUPERFAMILY SSF46992 3 86 3.53E-25 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS09125 2069841417cbe0e725265db4c6273da8 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.186 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS10150 20f3dad9f1e1ea9f06537c98c729f1b5 85 PANTHER PTHR38040:SF1 8 83 5.0E-21 T 22-04-2016 PNUC_RS10150 20f3dad9f1e1ea9f06537c98c729f1b5 85 PANTHER PTHR38040 8 83 5.0E-21 T 22-04-2016 PNUC_RS10150 20f3dad9f1e1ea9f06537c98c729f1b5 85 Pfam PF04380 Membrane fusogenic activity 12 83 3.4E-32 T 22-04-2016 IPR007475 Membrane fusogenic activity PNUC_RS08565 8c746c8fd11aed66c890b16716be75e1 466 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 14 170 8.1E-25 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS08565 8c746c8fd11aed66c890b16716be75e1 466 SMART SM00479 10 174 8.8E-40 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PNUC_RS08565 8c746c8fd11aed66c890b16716be75e1 466 SUPERFAMILY SSF53098 10 200 7.6E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS08565 8c746c8fd11aed66c890b16716be75e1 466 PANTHER PTHR30562 196 452 3.9E-63 T 22-04-2016 PNUC_RS08565 8c746c8fd11aed66c890b16716be75e1 466 PANTHER PTHR30562:SF10 196 452 3.9E-63 T 22-04-2016 PNUC_RS08565 8c746c8fd11aed66c890b16716be75e1 466 SUPERFAMILY SSF82771 205 286 1.7E-14 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily PNUC_RS08565 8c746c8fd11aed66c890b16716be75e1 466 Gene3D G3DSA:3.30.420.10 10 172 6.4E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS08565 8c746c8fd11aed66c890b16716be75e1 466 SMART SM00465 205 286 3.6E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily PNUC_RS08565 8c746c8fd11aed66c890b16716be75e1 466 Pfam PF00929 Exonuclease 13 160 2.3E-28 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PNUC_RS04790 d208d2733718c121c5276e34343a8f2f 295 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 28 272 43.778 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD PNUC_RS04790 d208d2733718c121c5276e34343a8f2f 295 Pfam PF13525 Outer membrane lipoprotein 61 264 5.8E-60 T 22-04-2016 PNUC_RS04790 d208d2733718c121c5276e34343a8f2f 295 SUPERFAMILY SSF48452 64 240 5.0E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS04790 d208d2733718c121c5276e34343a8f2f 295 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 31 276 1.1E-81 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD PNUC_RS04790 d208d2733718c121c5276e34343a8f2f 295 Gene3D G3DSA:1.25.40.10 64 245 8.3E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS04790 d208d2733718c121c5276e34343a8f2f 295 PANTHER PTHR37423 20 278 2.0E-77 T 22-04-2016 PNUC_RS01370 16e5a03c17941d6e63c2935a043c979f 281 PANTHER PTHR30622:SF3 2 280 1.1E-119 T 22-04-2016 PNUC_RS01370 16e5a03c17941d6e63c2935a043c979f 281 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 272 17.781 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PNUC_RS01370 16e5a03c17941d6e63c2935a043c979f 281 Pfam PF02673 Bacitracin resistance protein BacA 9 266 2.2E-76 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PNUC_RS01370 16e5a03c17941d6e63c2935a043c979f 281 PANTHER PTHR30622 2 280 1.1E-119 T 22-04-2016 PNUC_RS01370 16e5a03c17941d6e63c2935a043c979f 281 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 265 4.2E-69 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PNUC_RS00425 a6b81fed3b226476ea2d0ed323d323c2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 7.4E-18 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00425 a6b81fed3b226476ea2d0ed323d323c2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 15.777 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00425 a6b81fed3b226476ea2d0ed323d323c2 38 PANTHER PTHR18804 1 38 7.3E-15 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00425 a6b81fed3b226476ea2d0ed323d323c2 38 Pfam PF00444 Ribosomal protein L36 1 38 4.5E-16 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00425 a6b81fed3b226476ea2d0ed323d323c2 38 SUPERFAMILY SSF57840 1 38 6.67E-14 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00425 a6b81fed3b226476ea2d0ed323d323c2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS09770 e432a12bb9544d020e372ada29a13de0 352 SUPERFAMILY SSF55347 149 320 5.1E-46 T 22-04-2016 PNUC_RS09770 e432a12bb9544d020e372ada29a13de0 352 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 346 41.029 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS09770 e432a12bb9544d020e372ada29a13de0 352 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 173 323 1.8E-18 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS09770 e432a12bb9544d020e372ada29a13de0 352 SUPERFAMILY SSF51735 2 163 1.28E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS09770 e432a12bb9544d020e372ada29a13de0 352 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 352 3.8E-125 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS09770 e432a12bb9544d020e372ada29a13de0 352 Gene3D G3DSA:3.30.360.10 156 320 9.3E-54 T 22-04-2016 PNUC_RS09770 e432a12bb9544d020e372ada29a13de0 352 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 141 2.2E-39 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PNUC_RS09770 e432a12bb9544d020e372ada29a13de0 352 PANTHER PTHR32338 1 352 4.1E-166 T 22-04-2016 PNUC_RS09770 e432a12bb9544d020e372ada29a13de0 352 PANTHER PTHR32338:SF8 1 352 4.1E-166 T 22-04-2016 PNUC_RS09770 e432a12bb9544d020e372ada29a13de0 352 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PNUC_RS09770 e432a12bb9544d020e372ada29a13de0 352 Gene3D G3DSA:3.40.50.720 1 155 6.8E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS09770 e432a12bb9544d020e372ada29a13de0 352 SMART SM00859 3 141 6.8E-66 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PNUC_RS07435 19059e4f1328f4073a14729ae44170cd 632 SMART SM00729 357 570 4.7E-15 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PNUC_RS07435 19059e4f1328f4073a14729ae44170cd 632 Pfam PF02310 B12 binding domain 195 284 2.2E-7 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PNUC_RS07435 19059e4f1328f4073a14729ae44170cd 632 SUPERFAMILY SSF52242 207 271 3.66E-5 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PNUC_RS07435 19059e4f1328f4073a14729ae44170cd 632 Gene3D G3DSA:3.80.30.20 361 547 2.2E-20 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PNUC_RS07435 19059e4f1328f4073a14729ae44170cd 632 Pfam PF04055 Radical SAM superfamily 360 521 1.1E-8 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PNUC_RS07435 19059e4f1328f4073a14729ae44170cd 632 PANTHER PTHR11918 213 525 1.0E-26 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein PNUC_RS07435 19059e4f1328f4073a14729ae44170cd 632 SUPERFAMILY SSF102114 335 525 1.06E-23 T 22-04-2016 PNUC_RS02455 52754e5c4a55b5d90bb6a190148d763f 308 PANTHER PTHR12128:SF16 13 301 5.1E-73 T 22-04-2016 PNUC_RS02455 52754e5c4a55b5d90bb6a190148d763f 308 SUPERFAMILY SSF51569 13 301 2.41E-64 T 22-04-2016 PNUC_RS02455 52754e5c4a55b5d90bb6a190148d763f 308 Gene3D G3DSA:3.20.20.70 9 302 4.8E-67 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS02455 52754e5c4a55b5d90bb6a190148d763f 308 PANTHER PTHR12128 13 301 5.1E-73 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PNUC_RS02455 52754e5c4a55b5d90bb6a190148d763f 308 PIRSF PIRSF001365 7 304 5.1E-51 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PNUC_RS02455 52754e5c4a55b5d90bb6a190148d763f 308 SMART SM01130 9 302 7.4E-66 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PNUC_RS02455 52754e5c4a55b5d90bb6a190148d763f 308 Pfam PF00701 Dihydrodipicolinate synthetase family 12 299 7.3E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PNUC_RS06735 d79abaaa55eb3eeab5ed8c12a5ec529a 503 SUPERFAMILY SSF117892 213 328 2.88E-20 T 22-04-2016 IPR001107 Band 7 domain PNUC_RS06735 d79abaaa55eb3eeab5ed8c12a5ec529a 503 TIGRFAM TIGR01933 hflK: HflK protein 152 425 5.9E-91 T 22-04-2016 IPR010201 HflK GO:0016021 PNUC_RS06735 d79abaaa55eb3eeab5ed8c12a5ec529a 503 PANTHER PTHR10264 66 455 1.3E-108 T 22-04-2016 IPR001972 Stomatin family GO:0016020 PNUC_RS06735 d79abaaa55eb3eeab5ed8c12a5ec529a 503 Pfam PF01145 SPFH domain / Band 7 family 154 338 9.3E-27 T 22-04-2016 IPR001107 Band 7 domain PNUC_RS06735 d79abaaa55eb3eeab5ed8c12a5ec529a 503 PANTHER PTHR10264:SF51 66 455 1.3E-108 T 22-04-2016 IPR010201 HflK GO:0016021 PNUC_RS06735 d79abaaa55eb3eeab5ed8c12a5ec529a 503 Pfam PF12221 Bacterial membrane protein N terminal 9 83 2.6E-10 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal PNUC_RS06735 d79abaaa55eb3eeab5ed8c12a5ec529a 503 SMART SM00244 150 323 3.0E-24 T 22-04-2016 IPR001107 Band 7 domain PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 7.0E-70 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 PIRSF PIRSF002133 1 124 2.1E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 Gene3D G3DSA:2.40.50.140 1 124 8.6E-66 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 PRINTS PR01034 Ribosomal protein S12 signature 27 42 7.3E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 PRINTS PR01034 Ribosomal protein S12 signature 77 94 7.3E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 PRINTS PR01034 Ribosomal protein S12 signature 58 77 7.3E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 PRINTS PR01034 Ribosomal protein S12 signature 42 57 7.3E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 PRINTS PR01034 Ribosomal protein S12 signature 94 110 7.3E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 PRINTS PR01034 Ribosomal protein S12 signature 110 122 7.3E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 SUPERFAMILY SSF50249 2 124 6.51E-53 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 Pfam PF00164 Ribosomal protein S12/S23 4 123 5.7E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 PANTHER PTHR11652 1 116 3.3E-78 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00290 5f56f3ec108bf5ed2bdf4a1eb0b51f39 126 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.404 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PNUC_RS07505 b5c7f23a579d7a5d21c2b22f43663b3e 275 Pfam PF03618 Kinase/pyrophosphorylase 8 264 1.3E-79 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 PNUC_RS07505 b5c7f23a579d7a5d21c2b22f43663b3e 275 PANTHER PTHR31756 6 271 2.5E-93 T 22-04-2016 PNUC_RS07505 b5c7f23a579d7a5d21c2b22f43663b3e 275 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 5 273 71.155 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein PNUC_RS07505 b5c7f23a579d7a5d21c2b22f43663b3e 275 PANTHER PTHR31756:SF3 6 271 2.5E-93 T 22-04-2016 PNUC_RS07845 f1d8c50429029b4d8a1931050f30968c 133 PANTHER PTHR34075:SF2 4 123 5.7E-27 T 22-04-2016 PNUC_RS07845 f1d8c50429029b4d8a1931050f30968c 133 SUPERFAMILY SSF50249 8 125 1.4E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS07845 f1d8c50429029b4d8a1931050f30968c 133 PANTHER PTHR34075 4 123 5.7E-27 T 22-04-2016 PNUC_RS07845 f1d8c50429029b4d8a1931050f30968c 133 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 60 119 3.0E-17 T 22-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal PNUC_RS07845 f1d8c50429029b4d8a1931050f30968c 133 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 24 58 5.4E-13 T 22-04-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 PANTHER PTHR12338:SF6 460 562 9.0E-54 T 22-04-2016 PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 Gene3D G3DSA:2.160.20.10 21 278 3.0E-19 T 22-04-2016 IPR012334 Pectin lyase fold PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 44 118 2.3E-22 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 SMART SM00912 6 122 8.2E-42 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 SUPERFAMILY SSF51126 33 308 2.48E-41 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 PANTHER PTHR12338 460 562 9.0E-54 T 22-04-2016 PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 PANTHER PTHR12338 9 255 9.0E-54 T 22-04-2016 PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 PANTHER PTHR12338 281 335 9.0E-54 T 22-04-2016 PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 PANTHER PTHR12338 355 442 9.0E-54 T 22-04-2016 PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 PANTHER PTHR12338 579 761 9.0E-54 T 22-04-2016 PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 Pfam PF05860 haemagglutination activity domain 10 122 9.0E-23 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 PANTHER PTHR12338:SF6 355 442 9.0E-54 T 22-04-2016 PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 PANTHER PTHR12338:SF6 579 761 9.0E-54 T 22-04-2016 PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 PANTHER PTHR12338:SF6 9 255 9.0E-54 T 22-04-2016 PNUC_RS06040 a9eeaeaf4912fbcd534216c93ab560bf 2172 PANTHER PTHR12338:SF6 281 335 9.0E-54 T 22-04-2016 PNUC_RS07480 d18ada80eb12b4194fe75111a645b55b 265 SUPERFAMILY SSF54001 7 246 3.64E-34 T 22-04-2016 PNUC_RS07480 d18ada80eb12b4194fe75111a645b55b 265 PANTHER PTHR33490 1 263 2.4E-52 T 22-04-2016 PNUC_RS07480 d18ada80eb12b4194fe75111a645b55b 265 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 78 2.7E-19 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal PNUC_RS07480 d18ada80eb12b4194fe75111a645b55b 265 Pfam PF01841 Transglutaminase-like superfamily 121 217 3.3E-18 T 22-04-2016 IPR002931 Transglutaminase-like PNUC_RS07480 d18ada80eb12b4194fe75111a645b55b 265 Gene3D G3DSA:3.90.260.10 155 247 8.2E-9 T 22-04-2016 IPR002931 Transglutaminase-like PNUC_RS07480 d18ada80eb12b4194fe75111a645b55b 265 PANTHER PTHR33490:SF5 1 263 2.4E-52 T 22-04-2016 PNUC_RS07480 d18ada80eb12b4194fe75111a645b55b 265 SMART SM00460 155 220 2.9E-9 T 22-04-2016 IPR002931 Transglutaminase-like PNUC_RS06620 53e4ea6a107684b2599b5bcd79f6d2b8 454 Pfam PF00583 Acetyltransferase (GNAT) family 354 426 1.5E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 PNUC_RS06620 53e4ea6a107684b2599b5bcd79f6d2b8 454 Gene3D G3DSA:3.40.630.30 310 451 1.2E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS06620 53e4ea6a107684b2599b5bcd79f6d2b8 454 PANTHER PTHR30602 21 454 1.4E-156 T 22-04-2016 PNUC_RS06620 53e4ea6a107684b2599b5bcd79f6d2b8 454 SUPERFAMILY SSF53633 17 303 4.19E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS06620 53e4ea6a107684b2599b5bcd79f6d2b8 454 Pfam PF00696 Amino acid kinase family 38 279 3.0E-24 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS06620 53e4ea6a107684b2599b5bcd79f6d2b8 454 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 21 454 2.3E-177 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 PNUC_RS06620 53e4ea6a107684b2599b5bcd79f6d2b8 454 PIRSF PIRSF000423 11 454 1.5E-172 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 PNUC_RS06620 53e4ea6a107684b2599b5bcd79f6d2b8 454 Gene3D G3DSA:3.40.1160.10 36 302 2.0E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PNUC_RS06620 53e4ea6a107684b2599b5bcd79f6d2b8 454 PANTHER PTHR30602:SF3 21 454 1.4E-156 T 22-04-2016 PNUC_RS06620 53e4ea6a107684b2599b5bcd79f6d2b8 454 SUPERFAMILY SSF55729 311 432 1.26E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS06620 53e4ea6a107684b2599b5bcd79f6d2b8 454 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 454 190.141 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 PNUC_RS06460 7e1c876d0d9811f10ec4992ff97ea2a7 587 SUPERFAMILY SSF55120 259 423 3.5E-41 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS06460 7e1c876d0d9811f10ec4992ff97ea2a7 587 Gene3D G3DSA:3.10.290.10 196 251 2.2E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS06460 7e1c876d0d9811f10ec4992ff97ea2a7 587 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 264 424 5.9E-50 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PNUC_RS06460 7e1c876d0d9811f10ec4992ff97ea2a7 587 PANTHER PTHR21600:SF2 197 424 1.4E-80 T 22-04-2016 PNUC_RS06460 7e1c876d0d9811f10ec4992ff97ea2a7 587 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 298 312 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PNUC_RS06460 7e1c876d0d9811f10ec4992ff97ea2a7 587 Pfam PF01479 S4 domain 198 242 4.0E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS06460 7e1c876d0d9811f10ec4992ff97ea2a7 587 SUPERFAMILY SSF55174 199 288 2.94E-15 T 22-04-2016 PNUC_RS06460 7e1c876d0d9811f10ec4992ff97ea2a7 587 SMART SM00363 197 257 5.3E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS06460 7e1c876d0d9811f10ec4992ff97ea2a7 587 PANTHER PTHR21600 197 424 1.4E-80 T 22-04-2016 PNUC_RS06460 7e1c876d0d9811f10ec4992ff97ea2a7 587 Pfam PF00849 RNA pseudouridylate synthase 260 393 3.0E-15 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS05090 203a3cea6ca4abf522004530542fe23a 263 Gene3D G3DSA:3.10.50.40 126 241 1.3E-37 T 22-04-2016 PNUC_RS05090 203a3cea6ca4abf522004530542fe23a 263 PANTHER PTHR10657 78 263 2.2E-33 T 22-04-2016 PNUC_RS05090 203a3cea6ca4abf522004530542fe23a 263 SUPERFAMILY SSF54534 129 222 1.57E-27 T 22-04-2016 PNUC_RS05090 203a3cea6ca4abf522004530542fe23a 263 SUPERFAMILY SSF109998 26 156 3.1E-18 T 22-04-2016 IPR027304 Trigger factor/SurA domain PNUC_RS05090 203a3cea6ca4abf522004530542fe23a 263 PANTHER PTHR10657:SF11 78 263 2.2E-33 T 22-04-2016 PNUC_RS05090 203a3cea6ca4abf522004530542fe23a 263 Pfam PF13616 PPIC-type PPIASE domain 125 218 6.4E-22 T 22-04-2016 PNUC_RS00340 5e15cd3ff1cc910446edc0960f579e8b 109 SUPERFAMILY SSF54843 1 108 7.98E-41 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00340 5e15cd3ff1cc910446edc0960f579e8b 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00340 5e15cd3ff1cc910446edc0960f579e8b 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 24.738 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 PNUC_RS00340 5e15cd3ff1cc910446edc0960f579e8b 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 106 1.3E-43 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 PNUC_RS00340 5e15cd3ff1cc910446edc0960f579e8b 109 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 4.8E-32 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00340 5e15cd3ff1cc910446edc0960f579e8b 109 Gene3D G3DSA:3.90.470.10 1 108 2.8E-41 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00340 5e15cd3ff1cc910446edc0960f579e8b 109 PANTHER PTHR13501 1 108 6.6E-48 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 PNUC_RS02700 c2e6a571c77c34e78be19eb78a49174e 188 Pfam PF01782 RimM N-terminal domain 11 106 1.5E-24 T 22-04-2016 IPR002676 RimM protein GO:0006364 PNUC_RS02700 c2e6a571c77c34e78be19eb78a49174e 188 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 10 186 4.6E-37 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PNUC_RS02700 c2e6a571c77c34e78be19eb78a49174e 188 SUPERFAMILY SSF50447 9 109 4.94E-15 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS02700 c2e6a571c77c34e78be19eb78a49174e 188 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 9 187 21.706 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PNUC_RS02700 c2e6a571c77c34e78be19eb78a49174e 188 Gene3D G3DSA:2.40.30.60 6 109 8.4E-26 T 22-04-2016 IPR002676 RimM protein GO:0006364 PNUC_RS02700 c2e6a571c77c34e78be19eb78a49174e 188 Gene3D G3DSA:2.30.30.240 115 186 1.0E-18 T 22-04-2016 PNUC_RS02700 c2e6a571c77c34e78be19eb78a49174e 188 PANTHER PTHR33692 7 183 5.1E-33 T 22-04-2016 PNUC_RS02700 c2e6a571c77c34e78be19eb78a49174e 188 SUPERFAMILY SSF50346 115 186 5.3E-16 T 22-04-2016 IPR011033 PRC-barrel-like PNUC_RS02050 6632071e9cc74bbfbf63224d4b55a010 229 SUPERFAMILY SSF56784 9 222 5.15E-53 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS02050 6632071e9cc74bbfbf63224d4b55a010 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 185 3.6E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS02050 6632071e9cc74bbfbf63224d4b55a010 229 PANTHER PTHR18901 8 220 1.8E-44 T 22-04-2016 PNUC_RS02050 6632071e9cc74bbfbf63224d4b55a010 229 Gene3D G3DSA:1.10.150.240 25 80 3.3E-7 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PNUC_RS02050 6632071e9cc74bbfbf63224d4b55a010 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 191 1.9E-32 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS02050 6632071e9cc74bbfbf63224d4b55a010 229 Gene3D G3DSA:3.40.50.1000 81 222 1.5E-37 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS02050 6632071e9cc74bbfbf63224d4b55a010 229 PANTHER PTHR18901:SF40 8 220 1.8E-44 T 22-04-2016 PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SUPERFAMILY SSF103515 10120 10429 2.75E-44 T 22-04-2016 IPR005546 Autotransporter beta-domain PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 4010 4038 5600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 2828 2850 9800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 3265 3287 3600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 3398 3424 9600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 9362 9383 4000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 8434 8460 1200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 6274 6306 4000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 3074 3095 5700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 4528 4550 3600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 7376 7397 3100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 8340 8362 6800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 6894 6916 1800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 5602 5641 3800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 7229 7257 1900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 7310 7331 2700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 6101 6123 3600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 7504 7526 3600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 4258 4286 1200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 9947 9968 2500.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 6965 6993 2800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 5178 5204 5600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 7990 8022 9200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 2912 2945 2900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 4878 4904 7900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 2483 2508 9800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 9879 9900 5700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 3939 3961 1800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 7951 7972 3200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 6680 6710 4900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 8023 8053 7400.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 7677 7709 4000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 3727 3748 1800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 4701 4733 2500.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 8732 8754 3600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 2326 2358 9300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 439 460 2100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 4652 4684 6200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 9114 9136 3400.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 5650 5672 7500.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 4339 4360 2700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 5779 5815 6600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 8606 8627 2500.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 9515 9537 2400.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 8895 8917 1900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 5904 5925 7100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 4406 4427 6700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 3824 3862 830.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 7628 7660 6200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 731 758 9300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 8076 8103 4600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 1995 2021 1200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 7172 7201 4800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 9489 9511 9900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 5744 5770 1000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 7266 7291 8300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 143 170 2700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 513 534 7100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 4169 4203 7800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 6225 6257 6200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 8540 8561 2700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 582 603 2500.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 5973 5994 4100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 2588 2613 3400.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 4295 4320 8300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 1297 1320 9700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 3140 3161 5600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00710 843 869 5600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 8.6E-9 T 22-04-2016 IPR024973 ESPR domain PNUC_RS05725 5df89e4a060aa528c662e0bf8faf4be8 10429 SMART SM00869 10153 10418 8.3E-34 T 22-04-2016 IPR005546 Autotransporter beta-domain PNUC_RS00695 43b0bff6e0c3a9fb878dc6f7402a5ceb 203 Gene3D G3DSA:3.40.30.10 1 90 1.7E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS00695 43b0bff6e0c3a9fb878dc6f7402a5ceb 203 Gene3D G3DSA:1.20.1050.10 91 187 3.7E-18 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS00695 43b0bff6e0c3a9fb878dc6f7402a5ceb 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 2.2E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PNUC_RS00695 43b0bff6e0c3a9fb878dc6f7402a5ceb 203 PANTHER PTHR11260:SF44 1 203 9.1E-61 T 22-04-2016 PNUC_RS00695 43b0bff6e0c3a9fb878dc6f7402a5ceb 203 PANTHER PTHR11260 1 203 9.1E-61 T 22-04-2016 PNUC_RS00695 43b0bff6e0c3a9fb878dc6f7402a5ceb 203 SUPERFAMILY SSF47616 73 202 9.52E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS00695 43b0bff6e0c3a9fb878dc6f7402a5ceb 203 SUPERFAMILY SSF52833 1 101 1.27E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS00695 43b0bff6e0c3a9fb878dc6f7402a5ceb 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 188 1.0E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal PNUC_RS04595 67fc4faeb4621542a5df075657f9a7d8 556 Pfam PF00501 AMP-binding enzyme 39 464 2.3E-94 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PNUC_RS04595 67fc4faeb4621542a5df075657f9a7d8 556 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 22-04-2016 IPR020845 AMP-binding, conserved site PNUC_RS04595 67fc4faeb4621542a5df075657f9a7d8 556 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 547 2.0E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PNUC_RS04595 67fc4faeb4621542a5df075657f9a7d8 556 Gene3D G3DSA:2.30.38.10 385 458 1.0E-25 T 22-04-2016 PNUC_RS04595 67fc4faeb4621542a5df075657f9a7d8 556 Gene3D G3DSA:3.40.50.980 216 384 4.5E-38 T 22-04-2016 PNUC_RS04595 67fc4faeb4621542a5df075657f9a7d8 556 PANTHER PTHR24096 24 154 7.2E-149 T 22-04-2016 PNUC_RS04595 67fc4faeb4621542a5df075657f9a7d8 556 PANTHER PTHR24096 175 554 7.2E-149 T 22-04-2016 PNUC_RS04595 67fc4faeb4621542a5df075657f9a7d8 556 SUPERFAMILY SSF56801 24 555 1.1E-133 T 22-04-2016 PNUC_RS04595 67fc4faeb4621542a5df075657f9a7d8 556 Gene3D G3DSA:3.30.300.30 459 555 6.9E-27 T 22-04-2016 PNUC_RS04595 67fc4faeb4621542a5df075657f9a7d8 556 Gene3D G3DSA:3.40.50.980 27 215 1.4E-32 T 22-04-2016 PNUC_RS01135 67ec5e43bd4c4f236b0479b0467f0ed3 175 Pfam PF08534 Redoxin 49 165 1.0E-24 T 22-04-2016 IPR013740 Redoxin GO:0016491 PNUC_RS01135 67ec5e43bd4c4f236b0479b0467f0ed3 175 PANTHER PTHR10681 50 162 4.9E-18 T 22-04-2016 PNUC_RS01135 67ec5e43bd4c4f236b0479b0467f0ed3 175 PANTHER PTHR10681:SF125 50 162 4.9E-18 T 22-04-2016 PNUC_RS01135 67ec5e43bd4c4f236b0479b0467f0ed3 175 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PNUC_RS01135 67ec5e43bd4c4f236b0479b0467f0ed3 175 SUPERFAMILY SSF52833 9 174 1.25E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS01135 67ec5e43bd4c4f236b0479b0467f0ed3 175 Gene3D G3DSA:3.40.30.10 1 175 4.8E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 Gene3D G3DSA:1.10.560.10 369 518 8.7E-40 T 22-04-2016 IPR027413 GroEL-like equatorial domain PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 SUPERFAMILY SSF54849 137 203 5.72E-25 T 22-04-2016 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 6.8E-251 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 SUPERFAMILY SSF52029 184 376 1.26E-83 T 22-04-2016 IPR027409 GroEL-like apical domain PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 SUPERFAMILY SSF48592 406 521 8.4E-75 T 22-04-2016 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 SUPERFAMILY SSF48592 7 134 8.4E-75 T 22-04-2016 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 3.3E-96 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 Hamap MF_00600 60 kDa chaperonin [groL]. 2 549 41.134 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 PANTHER PTHR11353 2 550 6.7E-247 T 22-04-2016 PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 Gene3D G3DSA:3.50.7.10 189 368 1.1E-99 T 22-04-2016 IPR027409 GroEL-like apical domain PNUC_RS09370 166e7a92a83f25c6c6bb6ad0df038f56 550 Gene3D G3DSA:1.10.560.10 4 188 4.3E-46 T 22-04-2016 IPR027413 GroEL-like equatorial domain PNUC_RS09920 28fe147c1d6721181ad47ccf27dec779 328 Pfam PF02603 HPr Serine kinase N terminus 10 139 2.3E-24 T 22-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 PNUC_RS09920 28fe147c1d6721181ad47ccf27dec779 328 Gene3D G3DSA:3.40.1390.20 15 141 3.9E-32 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like PNUC_RS09920 28fe147c1d6721181ad47ccf27dec779 328 PANTHER PTHR30305 51 321 2.7E-86 T 22-04-2016 PNUC_RS09920 28fe147c1d6721181ad47ccf27dec779 328 SUPERFAMILY SSF75138 8 141 2.35E-26 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like PNUC_RS09920 28fe147c1d6721181ad47ccf27dec779 328 Pfam PF07475 HPr Serine kinase C-terminal domain 144 310 1.1E-60 T 22-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 PNUC_RS09920 28fe147c1d6721181ad47ccf27dec779 328 SUPERFAMILY SSF53795 145 310 1.16E-33 T 22-04-2016 PNUC_RS09920 28fe147c1d6721181ad47ccf27dec779 328 Gene3D G3DSA:3.40.50.300 145 316 5.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09920 28fe147c1d6721181ad47ccf27dec779 328 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 14 312 5.1E-96 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 PNUC_RS09920 28fe147c1d6721181ad47ccf27dec779 328 PANTHER PTHR30305:SF1 51 321 2.7E-86 T 22-04-2016 PNUC_RS09920 28fe147c1d6721181ad47ccf27dec779 328 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 9 317 35.64 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 PNUC_RS03850 b079c5bbba59bc346f376880e9e0e9c7 184 Pfam PF09361 Phasin protein 6 104 1.5E-28 T 22-04-2016 IPR018968 Phasin PNUC_RS03850 b079c5bbba59bc346f376880e9e0e9c7 184 TIGRFAM TIGR01841 phasin: phasin family protein 27 112 6.8E-21 T 22-04-2016 IPR010127 Phasin, subfamily 1 PNUC_RS09835 928f8c50db7e81164c7787446aa3800c 247 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 246 3.1E-79 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PNUC_RS09835 928f8c50db7e81164c7787446aa3800c 247 PANTHER PTHR10108 4 247 2.4E-129 T 22-04-2016 PNUC_RS09835 928f8c50db7e81164c7787446aa3800c 247 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 246 5.4E-76 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PNUC_RS09835 928f8c50db7e81164c7787446aa3800c 247 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 31 46 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PNUC_RS09835 928f8c50db7e81164c7787446aa3800c 247 Gene3D G3DSA:3.40.50.150 19 240 2.6E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS09835 928f8c50db7e81164c7787446aa3800c 247 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 11 246 36.424 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PNUC_RS09835 928f8c50db7e81164c7787446aa3800c 247 SUPERFAMILY SSF53335 1 238 3.05E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS09835 928f8c50db7e81164c7787446aa3800c 247 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 155 169 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PNUC_RS09835 928f8c50db7e81164c7787446aa3800c 247 PANTHER PTHR10108:SF864 4 247 2.4E-129 T 22-04-2016 PNUC_RS01685 4218aea2af9567347a57f313cbb62459 277 SUPERFAMILY SSF53335 62 192 1.69E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01685 4218aea2af9567347a57f313cbb62459 277 PANTHER PTHR10108 65 176 3.8E-13 T 22-04-2016 PNUC_RS01685 4218aea2af9567347a57f313cbb62459 277 Gene3D G3DSA:3.40.50.150 240 264 3.3E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01685 4218aea2af9567347a57f313cbb62459 277 Gene3D G3DSA:3.40.50.150 61 180 3.3E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01685 4218aea2af9567347a57f313cbb62459 277 Pfam PF08241 Methyltransferase domain 79 174 7.8E-14 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PNUC_RS01310 432a301df4974a0ac38f5e72a9506744 443 SUPERFAMILY SSF53756 79 414 4.71E-11 T 22-04-2016 PNUC_RS01065 68b24c644be2db3914d713fb5c993850 199 PANTHER PTHR23114 1 158 1.2E-38 T 22-04-2016 PNUC_RS01065 68b24c644be2db3914d713fb5c993850 199 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.8E-7 T 22-04-2016 IPR020476 NUDIX hydrolase PNUC_RS01065 68b24c644be2db3914d713fb5c993850 199 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.8E-7 T 22-04-2016 IPR020476 NUDIX hydrolase PNUC_RS01065 68b24c644be2db3914d713fb5c993850 199 Pfam PF00293 NUDIX domain 7 135 8.5E-24 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PNUC_RS01065 68b24c644be2db3914d713fb5c993850 199 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 161 37.707 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH PNUC_RS01065 68b24c644be2db3914d713fb5c993850 199 SUPERFAMILY SSF55811 4 163 1.23E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS01065 68b24c644be2db3914d713fb5c993850 199 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PNUC_RS01065 68b24c644be2db3914d713fb5c993850 199 Gene3D G3DSA:3.90.79.10 7 157 7.1E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS04800 b0af145f9354cf94f08ce7e8b9129351 261 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 27 258 6.2E-72 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PNUC_RS04800 b0af145f9354cf94f08ce7e8b9129351 261 PANTHER PTHR30616 12 261 2.4E-114 T 22-04-2016 PNUC_RS04800 b0af145f9354cf94f08ce7e8b9129351 261 Gene3D G3DSA:3.60.140.10 4 259 1.4E-87 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PNUC_RS04800 b0af145f9354cf94f08ce7e8b9129351 261 SUPERFAMILY SSF64438 7 259 1.47E-76 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic PNUC_RS04800 b0af145f9354cf94f08ce7e8b9129351 261 PANTHER PTHR30616:SF3 12 261 2.4E-114 T 22-04-2016 PNUC_RS04800 b0af145f9354cf94f08ce7e8b9129351 261 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 33 259 6.3E-59 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PNUC_RS09715 3bd6d666362387f8c3f751bd0fc439fa 458 PANTHER PTHR10804 359 455 4.9E-132 T 22-04-2016 PNUC_RS09715 3bd6d666362387f8c3f751bd0fc439fa 458 PANTHER PTHR10804 10 343 4.9E-132 T 22-04-2016 PNUC_RS09715 3bd6d666362387f8c3f751bd0fc439fa 458 PANTHER PTHR10804:SF17 359 455 4.9E-132 T 22-04-2016 PNUC_RS09715 3bd6d666362387f8c3f751bd0fc439fa 458 PANTHER PTHR10804:SF17 10 343 4.9E-132 T 22-04-2016 PNUC_RS09715 3bd6d666362387f8c3f751bd0fc439fa 458 Gene3D G3DSA:3.90.230.10 189 456 4.7E-80 T 22-04-2016 IPR000994 Peptidase M24, structural domain PNUC_RS09715 3bd6d666362387f8c3f751bd0fc439fa 458 SMART SM01011 5 146 9.9E-56 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 PNUC_RS09715 3bd6d666362387f8c3f751bd0fc439fa 458 SUPERFAMILY SSF55920 185 457 2.22E-81 T 22-04-2016 IPR000994 Peptidase M24, structural domain PNUC_RS09715 3bd6d666362387f8c3f751bd0fc439fa 458 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 362 374 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PNUC_RS09715 3bd6d666362387f8c3f751bd0fc439fa 458 Pfam PF00557 Metallopeptidase family M24 191 433 5.3E-60 T 22-04-2016 IPR000994 Peptidase M24, structural domain PNUC_RS09715 3bd6d666362387f8c3f751bd0fc439fa 458 SUPERFAMILY SSF53092 6 184 6.8E-46 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal PNUC_RS09715 3bd6d666362387f8c3f751bd0fc439fa 458 Pfam PF05195 Aminopeptidase P, N-terminal domain 10 136 5.4E-32 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 PNUC_RS09715 3bd6d666362387f8c3f751bd0fc439fa 458 Gene3D G3DSA:3.40.350.10 7 188 1.3E-48 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PNUC_RS06850 e89de215cec7a77970af37903fbcec41 994 Pfam PF12705 PD-(D/E)XK nuclease superfamily 706 990 1.0E-33 T 22-04-2016 PNUC_RS06850 e89de215cec7a77970af37903fbcec41 994 SUPERFAMILY SSF52540 316 688 4.43E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06235 bc7df2d536b862cb743127915d01eab4 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 244 6.4E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS06235 bc7df2d536b862cb743127915d01eab4 257 Gene3D G3DSA:1.10.3720.10 53 250 3.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS06235 bc7df2d536b862cb743127915d01eab4 257 SUPERFAMILY SSF161098 57 239 4.97E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS06235 bc7df2d536b862cb743127915d01eab4 257 PANTHER PTHR30151 5 253 1.2E-57 T 22-04-2016 PNUC_RS07165 5adca69b085247c03af040751a005564 315 SUPERFAMILY SSF53850 95 275 6.69E-12 T 22-04-2016 PNUC_RS07165 5adca69b085247c03af040751a005564 315 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 311 2.6E-75 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS07165 5adca69b085247c03af040751a005564 315 PANTHER PTHR30349 1 280 1.2E-70 T 22-04-2016 PNUC_RS07165 5adca69b085247c03af040751a005564 315 PANTHER PTHR30349:SF16 1 280 1.2E-70 T 22-04-2016 PNUC_RS07165 5adca69b085247c03af040751a005564 315 PIRSF PIRSF017082 2 315 1.8E-73 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 631 1.3E-231 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 628 9.4E-126 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 1.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 1.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 1.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 1.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 1.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 1.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 Pfam PF01578 Cytochrome C assembly protein 89 295 5.9E-53 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PANTHER PTHR30009 461 636 1.5E-295 T 22-04-2016 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PANTHER PTHR30009 1 417 1.5E-295 T 22-04-2016 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PANTHER PTHR30009:SF0 461 636 1.5E-295 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PANTHER PTHR30009:SF0 1 417 1.5E-295 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 1.4E-52 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.4E-52 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 1.4E-52 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 621 634 1.4E-52 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 1.4E-52 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.4E-52 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07905 32c9d94edc9c58f87cc7b80476b660c2 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 1.4E-52 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS04685 b99238abad3e45dea6db3125a9241807 406 Pfam PF02515 CoA-transferase family III 4 382 2.3E-131 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 PNUC_RS04685 b99238abad3e45dea6db3125a9241807 406 SUPERFAMILY SSF89796 1 406 2.49E-142 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS04685 b99238abad3e45dea6db3125a9241807 406 Gene3D G3DSA:3.30.1540.10 232 314 4.6E-32 T 22-04-2016 PNUC_RS04685 b99238abad3e45dea6db3125a9241807 406 PANTHER PTHR24023:SF593 62 393 6.9E-36 T 22-04-2016 PNUC_RS04685 b99238abad3e45dea6db3125a9241807 406 Gene3D G3DSA:3.40.50.10540 2 226 9.5E-125 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS04685 b99238abad3e45dea6db3125a9241807 406 Gene3D G3DSA:3.40.50.10540 315 406 9.5E-125 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS04685 b99238abad3e45dea6db3125a9241807 406 PANTHER PTHR24023 62 393 6.9E-36 T 22-04-2016 PNUC_RS08745 b92c96c4fb3249ba16ed5f0fd54b1df6 368 PANTHER PTHR30097 30 368 4.4E-31 T 22-04-2016 PNUC_RS08745 b92c96c4fb3249ba16ed5f0fd54b1df6 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 57 361 1.9E-28 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PNUC_RS08745 b92c96c4fb3249ba16ed5f0fd54b1df6 368 Gene3D G3DSA:2.40.50.100 177 215 2.7E-9 T 22-04-2016 PNUC_RS08745 b92c96c4fb3249ba16ed5f0fd54b1df6 368 Gene3D G3DSA:2.40.50.100 63 99 2.7E-9 T 22-04-2016 PNUC_RS08745 b92c96c4fb3249ba16ed5f0fd54b1df6 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 272 6.4E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PNUC_RS08745 b92c96c4fb3249ba16ed5f0fd54b1df6 368 PANTHER PTHR30097:SF4 30 368 4.4E-31 T 22-04-2016 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 Gene3D G3DSA:3.40.1190.10 124 293 1.4E-68 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 Gene3D G3DSA:3.40.1190.10 327 388 1.4E-68 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 24 529 3.0E-104 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 SUPERFAMILY SSF51984 24 122 3.33E-9 T 22-04-2016 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 23 531 31.21 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 Pfam PF08245 Mur ligase middle domain 153 369 1.3E-30 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 Pfam PF02875 Mur ligase family, glutamate ligase domain 390 449 2.6E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 SUPERFAMILY SSF53244 388 531 4.27E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 Gene3D G3DSA:3.40.50.720 24 122 2.6E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 SUPERFAMILY SSF53623 329 386 3.4E-46 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 SUPERFAMILY SSF53623 146 293 3.4E-46 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 PANTHER PTHR23135:SF2 14 539 4.7E-122 T 22-04-2016 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 Gene3D G3DSA:3.90.190.20 390 526 5.6E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS00895 aad4efdd19088cf3fcc2b44eac22dc75 540 PANTHER PTHR23135 14 539 4.7E-122 T 22-04-2016 PNUC_RS08890 9ca5c1e950ac52540c0309b8d74f0a23 257 PANTHER PTHR16950 31 256 1.3E-37 T 22-04-2016 PNUC_RS08890 9ca5c1e950ac52540c0309b8d74f0a23 257 Pfam PF02535 ZIP Zinc transporter 92 253 4.4E-34 T 22-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PNUC_RS08890 9ca5c1e950ac52540c0309b8d74f0a23 257 PANTHER PTHR16950:SF16 31 256 1.3E-37 T 22-04-2016 PNUC_RS04015 647f57f9a5a8904e45af77bbe8b6af24 275 Pfam PF01416 tRNA pseudouridine synthase 8 107 2.1E-8 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS04015 647f57f9a5a8904e45af77bbe8b6af24 275 Pfam PF01416 tRNA pseudouridine synthase 154 253 4.6E-28 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS04015 647f57f9a5a8904e45af77bbe8b6af24 275 PIRSF PIRSF001430 1 261 4.9E-75 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS04015 647f57f9a5a8904e45af77bbe8b6af24 275 Gene3D G3DSA:3.30.70.580 1 109 2.1E-35 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS04015 647f57f9a5a8904e45af77bbe8b6af24 275 SUPERFAMILY SSF55120 1 263 5.9E-84 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS04015 647f57f9a5a8904e45af77bbe8b6af24 275 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 247 8.1E-66 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS04015 647f57f9a5a8904e45af77bbe8b6af24 275 Gene3D G3DSA:3.30.70.660 111 251 3.1E-41 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS04015 647f57f9a5a8904e45af77bbe8b6af24 275 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 252 34.261 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS04015 647f57f9a5a8904e45af77bbe8b6af24 275 PANTHER PTHR11142 1 268 6.6E-85 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS10180 0a1194561cce2a253882c211e1d8ecfa 102 PANTHER PTHR11780:SF12 4 99 5.0E-30 T 22-04-2016 PNUC_RS10180 0a1194561cce2a253882c211e1d8ecfa 102 PANTHER PTHR11780 4 99 5.0E-30 T 22-04-2016 PNUC_RS10180 0a1194561cce2a253882c211e1d8ecfa 102 SUPERFAMILY SSF52833 4 101 1.12E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS10180 0a1194561cce2a253882c211e1d8ecfa 102 Gene3D G3DSA:3.40.30.10 4 100 5.0E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS05400 375583cba086366fe74ce7d044eb47f3 373 PANTHER PTHR22893:SF7 1 344 1.3E-136 T 22-04-2016 PNUC_RS05400 375583cba086366fe74ce7d044eb47f3 373 PANTHER PTHR22893 1 344 1.3E-136 T 22-04-2016 PNUC_RS05400 375583cba086366fe74ce7d044eb47f3 373 SUPERFAMILY SSF51395 1 358 7.61E-106 T 22-04-2016 PNUC_RS05400 375583cba086366fe74ce7d044eb47f3 373 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 335 1.5E-61 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PNUC_RS05400 375583cba086366fe74ce7d044eb47f3 373 Gene3D G3DSA:3.20.20.70 1 357 6.8E-117 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS03805 84f602b46bbdfccede0a772b92cd03fb 424 SUPERFAMILY SSF55424 356 424 6.04E-16 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PNUC_RS03805 84f602b46bbdfccede0a772b92cd03fb 424 SUPERFAMILY SSF51905 30 148 1.08E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03805 84f602b46bbdfccede0a772b92cd03fb 424 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 357 423 7.0E-20 T 22-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 PNUC_RS03805 84f602b46bbdfccede0a772b92cd03fb 424 Gene3D G3DSA:3.50.50.60 154 280 7.5E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03805 84f602b46bbdfccede0a772b92cd03fb 424 Gene3D G3DSA:3.90.760.10 357 424 1.5E-21 T 22-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 PNUC_RS03805 84f602b46bbdfccede0a772b92cd03fb 424 Gene3D G3DSA:3.50.50.60 30 146 5.8E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03805 84f602b46bbdfccede0a772b92cd03fb 424 Gene3D G3DSA:3.50.50.60 281 352 5.8E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03805 84f602b46bbdfccede0a772b92cd03fb 424 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 32 146 1.5E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03805 84f602b46bbdfccede0a772b92cd03fb 424 PANTHER PTHR10632 33 378 7.9E-95 T 22-04-2016 PNUC_RS03805 84f602b46bbdfccede0a772b92cd03fb 424 SUPERFAMILY SSF51905 153 279 2.43E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS03805 84f602b46bbdfccede0a772b92cd03fb 424 PANTHER PTHR10632:SF10 33 378 7.9E-95 T 22-04-2016 PNUC_RS01950 0bd8f7b6a6c57719323ac3518a501aa2 184 SUPERFAMILY SSF52499 2 179 2.09E-39 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PNUC_RS01950 0bd8f7b6a6c57719323ac3518a501aa2 184 Pfam PF00857 Isochorismatase family 7 154 1.8E-26 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PNUC_RS01950 0bd8f7b6a6c57719323ac3518a501aa2 184 Gene3D G3DSA:3.40.50.850 2 180 3.1E-51 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PNUC_RS01950 0bd8f7b6a6c57719323ac3518a501aa2 184 PANTHER PTHR14119 1 179 1.1E-49 T 22-04-2016 PNUC_RS02980 ee67f2357a281bcb7994aa02c9b0e4e1 298 Gene3D G3DSA:1.20.1510.10 20 217 7.9E-46 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain PNUC_RS02980 ee67f2357a281bcb7994aa02c9b0e4e1 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 20 297 7.7E-66 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PNUC_RS02980 ee67f2357a281bcb7994aa02c9b0e4e1 298 SUPERFAMILY SSF161111 18 218 7.32E-53 T 22-04-2016 PNUC_RS02980 ee67f2357a281bcb7994aa02c9b0e4e1 298 Pfam PF01545 Cation efflux family 24 217 1.0E-46 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PNUC_RS02980 ee67f2357a281bcb7994aa02c9b0e4e1 298 Pfam PF16916 Dimerisation domain of Zinc Transporter 222 298 1.1E-23 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain PNUC_RS02980 ee67f2357a281bcb7994aa02c9b0e4e1 298 Gene3D G3DSA:3.30.70.1350 218 298 4.0E-25 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain PNUC_RS02980 ee67f2357a281bcb7994aa02c9b0e4e1 298 PANTHER PTHR11562 15 298 1.2E-81 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PNUC_RS02980 ee67f2357a281bcb7994aa02c9b0e4e1 298 SUPERFAMILY SSF160240 221 298 2.88E-21 T 22-04-2016 PNUC_RS02980 ee67f2357a281bcb7994aa02c9b0e4e1 298 PANTHER PTHR11562:SF18 15 298 1.2E-81 T 22-04-2016 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 PANTHER PTHR11451:SF29 46 273 3.5E-198 T 22-04-2016 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 PANTHER PTHR11451:SF29 298 590 3.5E-198 T 22-04-2016 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 Gene3D G3DSA:3.40.50.620 238 293 9.4E-38 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 Gene3D G3DSA:3.40.50.620 49 122 9.4E-38 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 11 589 52.833 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 371 568 2.8E-52 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 Gene3D G3DSA:2.40.240.10 379 500 3.1E-41 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 55 66 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 SUPERFAMILY SSF50715 371 588 5.75E-69 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 SUPERFAMILY SSF52374 49 376 6.76E-92 T 22-04-2016 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 Gene3D G3DSA:2.40.240.10 501 587 6.8E-36 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 Gene3D G3DSA:3.90.800.10 127 235 2.1E-44 T 22-04-2016 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 49 358 2.5E-103 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 50 589 2.1E-214 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 PANTHER PTHR11451 46 273 3.5E-198 T 22-04-2016 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 PANTHER PTHR11451 298 590 3.5E-198 T 22-04-2016 PNUC_RS08955 b4dfc1962bd103d66e1583cf014b931c 590 Gene3D G3DSA:1.10.1160.10 294 368 3.3E-37 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 PNUC_RS04990 a79db3f0494b7106549c5019c2cb38c3 415 SUPERFAMILY SSF53901 6 257 1.22E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS04990 a79db3f0494b7106549c5019c2cb38c3 415 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 250 2.0E-36 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PNUC_RS04990 a79db3f0494b7106549c5019c2cb38c3 415 Gene3D G3DSA:3.40.47.10 6 261 9.6E-51 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS04990 a79db3f0494b7106549c5019c2cb38c3 415 Gene3D G3DSA:3.40.47.10 267 413 5.6E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS04990 a79db3f0494b7106549c5019c2cb38c3 415 PANTHER PTHR11712 6 413 1.4E-111 T 22-04-2016 PNUC_RS04990 a79db3f0494b7106549c5019c2cb38c3 415 SMART SM00825 Beta-ketoacyl synthase 8 415 2.9E-15 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PNUC_RS04990 a79db3f0494b7106549c5019c2cb38c3 415 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 258 369 5.6E-29 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PNUC_RS04990 a79db3f0494b7106549c5019c2cb38c3 415 SUPERFAMILY SSF53901 221 412 1.83E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS07160 6065e3ef7703cf3b7b86f74d1166d1af 382 Pfam PF00266 Aminotransferase class-V 22 291 3.5E-11 T 22-04-2016 IPR000192 Aminotransferase class V domain PNUC_RS07160 6065e3ef7703cf3b7b86f74d1166d1af 382 PIRSF PIRSF000524 17 381 1.3E-38 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PNUC_RS07160 6065e3ef7703cf3b7b86f74d1166d1af 382 PANTHER PTHR21152 24 374 9.7E-58 T 22-04-2016 PNUC_RS07160 6065e3ef7703cf3b7b86f74d1166d1af 382 SUPERFAMILY SSF53383 10 373 5.88E-71 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS07160 6065e3ef7703cf3b7b86f74d1166d1af 382 PANTHER PTHR21152:SF21 24 374 9.7E-58 T 22-04-2016 PNUC_RS07160 6065e3ef7703cf3b7b86f74d1166d1af 382 Gene3D G3DSA:3.40.640.10 21 265 8.3E-48 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS07880 34cae755d6de745f7f96e11a785e5169 322 PANTHER PTHR30349 23 292 5.8E-80 T 22-04-2016 PNUC_RS07880 34cae755d6de745f7f96e11a785e5169 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 317 6.6E-87 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS07880 34cae755d6de745f7f96e11a785e5169 322 SUPERFAMILY SSF53850 94 283 5.52E-15 T 22-04-2016 PNUC_RS07880 34cae755d6de745f7f96e11a785e5169 322 PIRSF PIRSF017082 7 321 5.9E-80 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS07880 34cae755d6de745f7f96e11a785e5169 322 PANTHER PTHR30349:SF32 23 292 5.8E-80 T 22-04-2016 PNUC_RS00780 a7d589de438d49cbbc0f472f3750465d 116 Gene3D G3DSA:1.10.10.10 43 112 9.1E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS00780 a7d589de438d49cbbc0f472f3750465d 116 SUPERFAMILY SSF46785 49 114 5.6E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03465 1d264d1f25760c14fdbbe50545963eae 459 PANTHER PTHR11785 2 457 8.6E-206 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PNUC_RS03465 1d264d1f25760c14fdbbe50545963eae 459 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PNUC_RS03465 1d264d1f25760c14fdbbe50545963eae 459 PANTHER PTHR11785:SF29 2 457 8.6E-206 T 22-04-2016 PNUC_RS03465 1d264d1f25760c14fdbbe50545963eae 459 Pfam PF00324 Amino acid permease 16 428 2.0E-112 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PNUC_RS03465 1d264d1f25760c14fdbbe50545963eae 459 PIRSF PIRSF006060 2 459 1.1E-67 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PNUC_RS07560 5a3b341b6ac3cf5bb76970d2f1fe0cff 392 SUPERFAMILY SSF55347 126 270 3.17E-61 T 22-04-2016 PNUC_RS07560 5a3b341b6ac3cf5bb76970d2f1fe0cff 392 SUPERFAMILY SSF69055 298 391 3.27E-30 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS07560 5a3b341b6ac3cf5bb76970d2f1fe0cff 392 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 388 47.192 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS07560 5a3b341b6ac3cf5bb76970d2f1fe0cff 392 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 383 9.4E-42 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS07560 5a3b341b6ac3cf5bb76970d2f1fe0cff 392 PANTHER PTHR30525 1 392 5.2E-218 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS07560 5a3b341b6ac3cf5bb76970d2f1fe0cff 392 SUPERFAMILY SSF51735 2 150 8.58E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS07560 5a3b341b6ac3cf5bb76970d2f1fe0cff 392 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 235 4.9E-38 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS07560 5a3b341b6ac3cf5bb76970d2f1fe0cff 392 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.5E-45 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS07560 5a3b341b6ac3cf5bb76970d2f1fe0cff 392 PIRSF PIRSF006205 1 392 1.0E-154 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS07560 5a3b341b6ac3cf5bb76970d2f1fe0cff 392 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 387 1.3E-158 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS07560 5a3b341b6ac3cf5bb76970d2f1fe0cff 392 Gene3D G3DSA:1.10.1740.10 309 391 1.5E-30 T 22-04-2016 PNUC_RS07560 5a3b341b6ac3cf5bb76970d2f1fe0cff 392 Gene3D G3DSA:3.40.50.720 1 150 2.1E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02380 bbb92fc97c2e455d5a071a5a9937fbc8 216 Gene3D G3DSA:1.10.760.10 21 202 6.1E-36 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS02380 bbb92fc97c2e455d5a071a5a9937fbc8 216 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 10 186 5.2E-80 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PNUC_RS02380 bbb92fc97c2e455d5a071a5a9937fbc8 216 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 10 186 3.3E-79 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PNUC_RS02380 bbb92fc97c2e455d5a071a5a9937fbc8 216 PANTHER PTHR10422:SF23 26 166 2.8E-83 T 22-04-2016 PNUC_RS02380 bbb92fc97c2e455d5a071a5a9937fbc8 216 PANTHER PTHR10422 26 166 2.8E-83 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS02380 bbb92fc97c2e455d5a071a5a9937fbc8 216 SUPERFAMILY SSF46626 22 201 2.92E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS05740 b8f2a9527fc38ae7344469572a83fdc6 264 SUPERFAMILY SSF53335 35 242 1.47E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS05740 b8f2a9527fc38ae7344469572a83fdc6 264 Pfam PF05050 Methyltransferase FkbM domain 73 239 3.5E-17 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PNUC_RS05740 b8f2a9527fc38ae7344469572a83fdc6 264 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 71 220 2.1E-21 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PNUC_RS05740 b8f2a9527fc38ae7344469572a83fdc6 264 Gene3D G3DSA:3.40.50.150 57 241 6.0E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS05540 d60ca8919d5f31d94d08503bb5dc595e 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 1.2E-74 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS05540 d60ca8919d5f31d94d08503bb5dc595e 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 6.3E-64 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS05540 d60ca8919d5f31d94d08503bb5dc595e 338 Gene3D G3DSA:1.10.1040.10 42 325 6.4E-114 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PNUC_RS05540 d60ca8919d5f31d94d08503bb5dc595e 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 4.1E-133 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS05540 d60ca8919d5f31d94d08503bb5dc595e 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 45.281 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS05540 d60ca8919d5f31d94d08503bb5dc595e 338 PANTHER PTHR21371 1 337 6.9E-187 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS05540 d60ca8919d5f31d94d08503bb5dc595e 338 Gene3D G3DSA:3.50.50.60 3 41 4.2E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05540 d60ca8919d5f31d94d08503bb5dc595e 338 SUPERFAMILY SSF48179 183 333 2.89E-70 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS05540 d60ca8919d5f31d94d08503bb5dc595e 338 SUPERFAMILY SSF51735 1 182 5.84E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02740 7c4ff4deb505b4e5d1ffc61b81f62983 207 PANTHER PTHR10192 8 203 6.4E-71 T 22-04-2016 PNUC_RS02740 7c4ff4deb505b4e5d1ffc61b81f62983 207 Gene3D G3DSA:3.40.980.10 14 204 2.7E-47 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02740 7c4ff4deb505b4e5d1ffc61b81f62983 207 SMART SM00852 18 168 4.8E-22 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02740 7c4ff4deb505b4e5d1ffc61b81f62983 207 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 15 162 7.5E-35 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02740 7c4ff4deb505b4e5d1ffc61b81f62983 207 Pfam PF00994 Probable molybdopterin binding domain 19 162 1.7E-28 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02740 7c4ff4deb505b4e5d1ffc61b81f62983 207 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 80 93 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 PNUC_RS02740 7c4ff4deb505b4e5d1ffc61b81f62983 207 SUPERFAMILY SSF53218 15 203 3.66E-44 T 22-04-2016 IPR001453 MoaB/Mog domain PNUC_RS02710 571824f7ecf3e426c30bd745f3c7edde 129 PANTHER PTHR15680 2 118 2.3E-55 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02710 571824f7ecf3e426c30bd745f3c7edde 129 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02710 571824f7ecf3e426c30bd745f3c7edde 129 SUPERFAMILY SSF50104 1 120 3.41E-45 T 22-04-2016 IPR008991 Translation protein SH3-like domain PNUC_RS02710 571824f7ecf3e426c30bd745f3c7edde 129 PIRSF PIRSF002191 1 129 2.1E-51 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02710 571824f7ecf3e426c30bd745f3c7edde 129 Pfam PF01245 Ribosomal protein L19 2 117 2.5E-47 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02710 571824f7ecf3e426c30bd745f3c7edde 129 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 2.6E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02710 571824f7ecf3e426c30bd745f3c7edde 129 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 30.525 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02710 571824f7ecf3e426c30bd745f3c7edde 129 PRINTS PR00061 Ribosomal protein L19 signature 38 67 4.8E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02710 571824f7ecf3e426c30bd745f3c7edde 129 PRINTS PR00061 Ribosomal protein L19 signature 92 117 4.8E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02710 571824f7ecf3e426c30bd745f3c7edde 129 PRINTS PR00061 Ribosomal protein L19 signature 8 37 4.8E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS09350 3826c5ba683c6b44af0c6acd8c97287e 279 PANTHER PTHR11927:SF9 1 216 4.4E-13 T 22-04-2016 PNUC_RS09350 3826c5ba683c6b44af0c6acd8c97287e 279 Pfam PF01531 Glycosyl transferase family 11 3 229 1.8E-17 T 22-04-2016 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 KEGG: 00601+2.4.1.69|KEGG: 00603+2.4.1.69|UniPathway: UPA00378 PNUC_RS09350 3826c5ba683c6b44af0c6acd8c97287e 279 PANTHER PTHR11927 1 216 4.4E-13 T 22-04-2016 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 KEGG: 00601+2.4.1.69|KEGG: 00603+2.4.1.69|UniPathway: UPA00378 PNUC_RS02105 ed4dae752bec72145a89684ec6eb8b3e 415 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 259 371 3.0E-34 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PNUC_RS02105 ed4dae752bec72145a89684ec6eb8b3e 415 Gene3D G3DSA:3.40.47.10 8 261 2.4E-80 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS02105 ed4dae752bec72145a89684ec6eb8b3e 415 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 251 2.3E-60 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PNUC_RS02105 ed4dae752bec72145a89684ec6eb8b3e 415 PANTHER PTHR11712 7 411 2.5E-211 T 22-04-2016 PNUC_RS02105 ed4dae752bec72145a89684ec6eb8b3e 415 SMART SM00825 Beta-ketoacyl synthase 10 411 4.6E-16 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PNUC_RS02105 ed4dae752bec72145a89684ec6eb8b3e 415 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 159 175 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site PNUC_RS02105 ed4dae752bec72145a89684ec6eb8b3e 415 SUPERFAMILY SSF53901 218 413 3.42E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS02105 ed4dae752bec72145a89684ec6eb8b3e 415 Gene3D G3DSA:3.40.47.10 267 413 1.1E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS02105 ed4dae752bec72145a89684ec6eb8b3e 415 PIRSF PIRSF000447 5 415 1.2E-184 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 PNUC_RS02105 ed4dae752bec72145a89684ec6eb8b3e 415 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 8 411 5.9E-196 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 PNUC_RS02105 ed4dae752bec72145a89684ec6eb8b3e 415 SUPERFAMILY SSF53901 8 256 8.12E-81 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PNUC_RS08085 08090f419200562a682e3ffa97023b2b 392 SUPERFAMILY SSF53822 25 382 3.66E-81 T 22-04-2016 IPR028082 Periplasmic binding protein-like I PNUC_RS08085 08090f419200562a682e3ffa97023b2b 392 PANTHER PTHR30483 6 392 1.3E-62 T 22-04-2016 PNUC_RS08085 08090f419200562a682e3ffa97023b2b 392 Gene3D G3DSA:3.40.50.2300 24 225 3.7E-52 T 22-04-2016 PNUC_RS08085 08090f419200562a682e3ffa97023b2b 392 Pfam PF13458 Periplasmic binding protein 25 365 3.7E-66 T 22-04-2016 IPR028081 Leucine-binding protein domain PNUC_RS08085 08090f419200562a682e3ffa97023b2b 392 PANTHER PTHR30483:SF6 6 392 1.3E-62 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PNUC_RS08085 08090f419200562a682e3ffa97023b2b 392 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 66 84 1.4E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PNUC_RS08085 08090f419200562a682e3ffa97023b2b 392 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 25 41 1.4E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PNUC_RS08085 08090f419200562a682e3ffa97023b2b 392 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 281 294 1.4E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PNUC_RS08085 08090f419200562a682e3ffa97023b2b 392 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 47 63 1.4E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PNUC_RS01160 5e30ee6fdae0900b9ed19dfc84ff9262 283 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 267 1.9E-78 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS01160 5e30ee6fdae0900b9ed19dfc84ff9262 283 PANTHER PTHR21089:SF2 1 265 1.1E-108 T 22-04-2016 PNUC_RS01160 5e30ee6fdae0900b9ed19dfc84ff9262 283 SUPERFAMILY SSF53223 3 100 8.06E-30 T 22-04-2016 PNUC_RS01160 5e30ee6fdae0900b9ed19dfc84ff9262 283 Gene3D G3DSA:3.40.50.720 106 269 3.5E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01160 5e30ee6fdae0900b9ed19dfc84ff9262 283 PANTHER PTHR21089 1 265 1.1E-108 T 22-04-2016 PNUC_RS01160 5e30ee6fdae0900b9ed19dfc84ff9262 283 SUPERFAMILY SSF51735 101 269 1.13E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01160 5e30ee6fdae0900b9ed19dfc84ff9262 283 Gene3D G3DSA:3.40.192.10 3 105 7.2E-36 T 22-04-2016 PNUC_RS01160 5e30ee6fdae0900b9ed19dfc84ff9262 283 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 200 2.9E-8 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PNUC_RS01160 5e30ee6fdae0900b9ed19dfc84ff9262 283 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 282 30.602 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS01160 5e30ee6fdae0900b9ed19dfc84ff9262 283 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 2.2E-22 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS07285 e4a9149c75a3ed5a6be8fbdd5e81f600 250 PANTHER PTHR15822 1 250 3.7E-53 T 22-04-2016 PNUC_RS07285 e4a9149c75a3ed5a6be8fbdd5e81f600 250 PANTHER PTHR15822:SF7 1 250 3.7E-53 T 22-04-2016 PNUC_RS07285 e4a9149c75a3ed5a6be8fbdd5e81f600 250 Gene3D G3DSA:3.60.10.10 4 247 5.7E-14 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PNUC_RS07285 e4a9149c75a3ed5a6be8fbdd5e81f600 250 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 12 240 6.1E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PNUC_RS07285 e4a9149c75a3ed5a6be8fbdd5e81f600 250 SUPERFAMILY SSF56219 4 250 6.67E-38 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PNUC_RS04235 5297b7453252ba91d1bfdbba25f94851 114 Gene3D G3DSA:3.90.190.10 11 112 4.0E-35 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like PNUC_RS04235 5297b7453252ba91d1bfdbba25f94851 114 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 16 109 1.6E-27 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- PNUC_RS04235 5297b7453252ba91d1bfdbba25f94851 114 SUPERFAMILY SSF52799 16 104 1.77E-5 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like PNUC_RS04235 5297b7453252ba91d1bfdbba25f94851 114 Pfam PF04273 Putative phosphatase (DUF442) 9 110 1.6E-32 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 276 5.3E-82 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 4.3E-30 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 Gene3D G3DSA:3.20.190.10 2 121 1.2E-34 T 22-04-2016 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 SUPERFAMILY SSF81624 2 142 3.92E-35 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 SUPERFAMILY SSF57716 225 277 1.07E-16 T 22-04-2016 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 ProSitePatterns PS01242 Zinc finger FPG-type signature. 252 276 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 PANTHER PTHR22993 1 278 4.6E-104 T 22-04-2016 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 133 226 2.6E-19 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 SUPERFAMILY SSF46946 134 230 1.57E-23 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 Gene3D G3DSA:1.10.8.50 133 277 3.2E-44 T 22-04-2016 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 Pfam PF06827 Zinc finger found in FPG and IleRS 249 278 3.2E-12 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 PANTHER PTHR22993:SF15 1 278 4.6E-104 T 22-04-2016 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 277 39.994 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 SMART SM01232 133 229 2.9E-37 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PNUC_RS09935 e666239ccb3555e8ba89dd3daf2f9b2a 278 SMART SM00898 2 115 3.4E-46 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PNUC_RS08640 954f5b8c6f745d7df7590e75d07e302e 412 PANTHER PTHR23150 8 410 1.8E-90 T 22-04-2016 PNUC_RS08640 954f5b8c6f745d7df7590e75d07e302e 412 Pfam PF12867 DinB superfamily 18 150 5.5E-13 T 22-04-2016 IPR024775 DinB-like domain PNUC_RS08640 954f5b8c6f745d7df7590e75d07e302e 412 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 16 408 1.3E-136 T 22-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 PNUC_RS08640 954f5b8c6f745d7df7590e75d07e302e 412 Gene3D G3DSA:3.90.1580.10 176 410 1.7E-42 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme PNUC_RS08640 954f5b8c6f745d7df7590e75d07e302e 412 Pfam PF03781 Sulfatase-modifying factor enzyme 1 185 328 2.3E-16 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme PNUC_RS08640 954f5b8c6f745d7df7590e75d07e302e 412 PANTHER PTHR23150:SF24 8 410 1.8E-90 T 22-04-2016 PNUC_RS08640 954f5b8c6f745d7df7590e75d07e302e 412 SUPERFAMILY SSF56436 181 410 3.06E-56 T 22-04-2016 IPR016187 C-type lectin fold PNUC_RS08640 954f5b8c6f745d7df7590e75d07e302e 412 SUPERFAMILY SSF109854 15 147 1.33E-6 T 22-04-2016 PNUC_RS08650 17d07a754d59971847b62d606e8896cf 425 PANTHER PTHR23508 8 417 8.9E-253 T 22-04-2016 PNUC_RS08650 17d07a754d59971847b62d606e8896cf 425 Pfam PF00083 Sugar (and other) transporter 17 423 1.9E-26 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PNUC_RS08650 17d07a754d59971847b62d606e8896cf 425 Gene3D G3DSA:1.20.1250.20 238 416 5.1E-17 T 22-04-2016 PNUC_RS08650 17d07a754d59971847b62d606e8896cf 425 Gene3D G3DSA:1.20.1250.20 13 212 4.3E-24 T 22-04-2016 PNUC_RS08650 17d07a754d59971847b62d606e8896cf 425 PANTHER PTHR23508:SF14 8 417 8.9E-253 T 22-04-2016 PNUC_RS08650 17d07a754d59971847b62d606e8896cf 425 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PNUC_RS08650 17d07a754d59971847b62d606e8896cf 425 SUPERFAMILY SSF103473 13 418 1.02E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS08650 17d07a754d59971847b62d606e8896cf 425 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PNUC_RS03315 cefa70e98f90da3872a4a6c529144254 706 PANTHER PTHR32552:SF0 33 304 1.1E-54 T 22-04-2016 PNUC_RS03315 cefa70e98f90da3872a4a6c529144254 706 PANTHER PTHR32552:SF0 336 706 1.1E-54 T 22-04-2016 PNUC_RS03315 cefa70e98f90da3872a4a6c529144254 706 SUPERFAMILY SSF56935 32 706 8.06E-84 T 22-04-2016 PNUC_RS03315 cefa70e98f90da3872a4a6c529144254 706 PANTHER PTHR32552 33 304 1.1E-54 T 22-04-2016 PNUC_RS03315 cefa70e98f90da3872a4a6c529144254 706 PANTHER PTHR32552 336 706 1.1E-54 T 22-04-2016 PNUC_RS03315 cefa70e98f90da3872a4a6c529144254 706 Gene3D G3DSA:2.170.130.10 32 159 1.2E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PNUC_RS03315 cefa70e98f90da3872a4a6c529144254 706 Pfam PF00593 TonB dependent receptor 458 704 2.2E-9 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PNUC_RS03315 cefa70e98f90da3872a4a6c529144254 706 Gene3D G3DSA:2.40.170.20 160 706 1.4E-58 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PNUC_RS03315 cefa70e98f90da3872a4a6c529144254 706 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 689 706 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site PNUC_RS03315 cefa70e98f90da3872a4a6c529144254 706 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 157 2.5E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 260 1.77E-62 T 22-04-2016 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 119 139 1.77E-62 T 22-04-2016 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 261 287 1.77E-62 T 22-04-2016 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 166 187 1.77E-62 T 22-04-2016 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 434 453 1.77E-62 T 22-04-2016 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 329 341 1.77E-62 T 22-04-2016 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 91 116 1.77E-62 T 22-04-2016 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 11 677 1.7E-240 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 73 130 3.9E-27 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 93 113 5.89E-17 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 495 516 5.89E-17 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 45 64 5.89E-17 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 279 301 5.89E-17 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 67 91 5.89E-17 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 433 455 5.89E-17 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PANTHER PTHR22773:SF50 1 629 8.2E-246 T 22-04-2016 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 PANTHER PTHR22773 1 629 8.2E-246 T 22-04-2016 PNUC_RS05430 da007eb0d30e00068e33aa34ce57d1b5 685 Pfam PF00361 Proton-conducting membrane transporter 142 424 2.0E-86 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PNUC_RS00500 88e5cad596f3c16e14e5897686d8bffc 161 PRINTS PR01100 Shikimate kinase family signature 86 103 8.1E-13 T 22-04-2016 PNUC_RS00500 88e5cad596f3c16e14e5897686d8bffc 161 PRINTS PR01100 Shikimate kinase family signature 65 74 8.1E-13 T 22-04-2016 PNUC_RS00500 88e5cad596f3c16e14e5897686d8bffc 161 PRINTS PR01100 Shikimate kinase family signature 47 55 8.1E-13 T 22-04-2016 PNUC_RS00500 88e5cad596f3c16e14e5897686d8bffc 161 PRINTS PR01100 Shikimate kinase family signature 19 32 8.1E-13 T 22-04-2016 PNUC_RS00500 88e5cad596f3c16e14e5897686d8bffc 161 Pfam PF01202 Shikimate kinase 1 157 5.9E-51 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS00500 88e5cad596f3c16e14e5897686d8bffc 161 SUPERFAMILY SSF52540 1 155 1.14E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00500 88e5cad596f3c16e14e5897686d8bffc 161 Hamap MF_00109 Shikimate kinase [aroK]. 1 158 23.751 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS00500 88e5cad596f3c16e14e5897686d8bffc 161 PANTHER PTHR21087 1 158 1.7E-47 T 22-04-2016 PNUC_RS00500 88e5cad596f3c16e14e5897686d8bffc 161 ProSitePatterns PS01128 Shikimate kinase signature. 48 73 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS00500 88e5cad596f3c16e14e5897686d8bffc 161 Gene3D G3DSA:3.40.50.300 1 158 4.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00500 88e5cad596f3c16e14e5897686d8bffc 161 PANTHER PTHR21087:SF0 1 158 1.7E-47 T 22-04-2016 PNUC_RS03660 13b2e98712e54b613b70c79a14871df2 553 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 237 363 9.6E-22 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 PNUC_RS03660 13b2e98712e54b613b70c79a14871df2 553 SMART SM00382 37 184 6.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS03660 13b2e98712e54b613b70c79a14871df2 553 SUPERFAMILY SSF52540 33 230 1.19E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03660 13b2e98712e54b613b70c79a14871df2 553 PANTHER PTHR11669 1 416 3.6E-165 T 22-04-2016 PNUC_RS03660 13b2e98712e54b613b70c79a14871df2 553 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 5 360 4.5E-130 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 PNUC_RS03660 13b2e98712e54b613b70c79a14871df2 553 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 422 545 2.1E-15 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS03660 13b2e98712e54b613b70c79a14871df2 553 Pfam PF13177 DNA polymerase III, delta subunit 20 183 6.2E-41 T 22-04-2016 PNUC_RS03660 13b2e98712e54b613b70c79a14871df2 553 SUPERFAMILY SSF48019 248 365 7.48E-26 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 PNUC_RS03660 13b2e98712e54b613b70c79a14871df2 553 Gene3D G3DSA:3.40.50.300 15 171 2.8E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03660 13b2e98712e54b613b70c79a14871df2 553 Gene3D G3DSA:1.20.272.10 248 365 3.5E-37 T 22-04-2016 PNUC_RS03660 13b2e98712e54b613b70c79a14871df2 553 Gene3D G3DSA:1.10.8.60 172 247 6.5E-33 T 22-04-2016 PNUC_RS03660 13b2e98712e54b613b70c79a14871df2 553 PANTHER PTHR11669:SF0 1 416 3.6E-165 T 22-04-2016 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 PANTHER PTHR11405:SF1 25 321 1.6E-132 T 22-04-2016 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 SUPERFAMILY SSF53671 24 321 7.59E-102 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 PANTHER PTHR11405 25 321 1.6E-132 T 22-04-2016 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 70 77 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 238 248 2.4E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 141 155 2.4E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 68 82 2.4E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 300 311 2.4E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 101 114 2.4E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 25 321 7.7E-108 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 25 165 1.0E-47 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 Gene3D G3DSA:3.40.50.1370 162 308 2.5E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 171 319 6.6E-49 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 70 89 2.7E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 274 283 2.7E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 152 163 2.7E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 286 309 2.7E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 24 322 74.968 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PNUC_RS09115 cb3d22ff60cc22b11238a234ce2cf9c8 326 Gene3D G3DSA:3.40.50.1370 24 161 3.2E-53 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PNUC_RS04285 b1f6b7dd1b4fc7e0dac708213826ec74 556 PANTHER PTHR10617 12 480 7.9E-252 T 22-04-2016 PNUC_RS04285 b1f6b7dd1b4fc7e0dac708213826ec74 556 SUPERFAMILY SSF54373 221 315 4.71E-36 T 22-04-2016 PNUC_RS04285 b1f6b7dd1b4fc7e0dac708213826ec74 556 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 453 553 1.1E-49 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 PNUC_RS04285 b1f6b7dd1b4fc7e0dac708213826ec74 556 PANTHER PTHR10617:SF107 12 480 7.9E-252 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 PNUC_RS04285 b1f6b7dd1b4fc7e0dac708213826ec74 556 Pfam PF13450 NAD(P)-binding Rossmann-like domain 22 67 3.1E-6 T 22-04-2016 PNUC_RS04285 b1f6b7dd1b4fc7e0dac708213826ec74 556 SUPERFAMILY SSF54862 457 554 7.18E-29 T 22-04-2016 PNUC_RS04285 b1f6b7dd1b4fc7e0dac708213826ec74 556 Gene3D G3DSA:3.50.50.60 16 291 5.3E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04285 b1f6b7dd1b4fc7e0dac708213826ec74 556 SUPERFAMILY SSF51905 14 220 2.56E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04285 b1f6b7dd1b4fc7e0dac708213826ec74 556 SUPERFAMILY SSF51905 316 455 2.56E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 Gene3D G3DSA:3.40.120.10 179 253 3.2E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 444 1.0E-175 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 447 45.671 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 443 1.3E-11 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 367 2.9E-31 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 138 2.4E-41 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 Gene3D G3DSA:3.40.120.10 254 361 1.5E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 SUPERFAMILY SSF55957 360 444 8.63E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 PANTHER PTHR22573 4 444 3.8E-152 T 22-04-2016 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 SUPERFAMILY SSF53738 261 368 7.06E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 Gene3D G3DSA:3.40.120.10 3 155 1.2E-43 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 SUPERFAMILY SSF53738 2 184 1.29E-45 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 1.0E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 98 112 1.0E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 177 196 1.0E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 SUPERFAMILY SSF53738 159 259 8.63E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 257 5.2E-18 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 99 108 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 Gene3D G3DSA:3.30.310.50 362 444 1.9E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PNUC_RS05285 881163eb69b9169b193bf5c759996c43 447 PANTHER PTHR22573:SF15 4 444 3.8E-152 T 22-04-2016 PNUC_RS02215 d8d6dd441002d975c7341e6345ae65c3 90 Gene3D G3DSA:4.10.640.10 22 89 1.1E-28 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02215 d8d6dd441002d975c7341e6345ae65c3 90 SUPERFAMILY SSF46911 14 88 4.45E-26 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02215 d8d6dd441002d975c7341e6345ae65c3 90 PRINTS PR00974 Ribosomal protein S18 family signature 42 52 1.0E-15 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02215 d8d6dd441002d975c7341e6345ae65c3 90 PRINTS PR00974 Ribosomal protein S18 family signature 52 59 1.0E-15 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02215 d8d6dd441002d975c7341e6345ae65c3 90 PRINTS PR00974 Ribosomal protein S18 family signature 74 84 1.0E-15 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02215 d8d6dd441002d975c7341e6345ae65c3 90 PRINTS PR00974 Ribosomal protein S18 family signature 60 74 1.0E-15 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02215 d8d6dd441002d975c7341e6345ae65c3 90 ProSitePatterns PS00057 Ribosomal protein S18 signature. 35 58 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02215 d8d6dd441002d975c7341e6345ae65c3 90 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 16 87 19.896 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02215 d8d6dd441002d975c7341e6345ae65c3 90 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 35 87 8.0E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02215 d8d6dd441002d975c7341e6345ae65c3 90 PANTHER PTHR13479 7 84 1.3E-21 T 22-04-2016 PNUC_RS02215 d8d6dd441002d975c7341e6345ae65c3 90 TIGRFAM TIGR00165 S18: ribosomal protein bS18 19 86 1.7E-33 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02215 d8d6dd441002d975c7341e6345ae65c3 90 Pfam PF01084 Ribosomal protein S18 33 82 1.8E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS07695 5a90fe98d3c6efe520844f4b565e75ad 326 Pfam PF00472 RF-1 domain 190 298 7.6E-40 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PNUC_RS07695 5a90fe98d3c6efe520844f4b565e75ad 326 SMART SM00937 46 156 1.2E-53 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PNUC_RS07695 5a90fe98d3c6efe520844f4b565e75ad 326 PANTHER PTHR11075 2 324 6.9E-151 T 22-04-2016 PNUC_RS07695 5a90fe98d3c6efe520844f4b565e75ad 326 Gene3D G3DSA:1.20.58.410 2 77 1.6E-18 T 22-04-2016 PNUC_RS07695 5a90fe98d3c6efe520844f4b565e75ad 326 SUPERFAMILY SSF75620 2 323 5.36E-129 T 22-04-2016 PNUC_RS07695 5a90fe98d3c6efe520844f4b565e75ad 326 PANTHER PTHR11075:SF6 2 324 6.9E-151 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PNUC_RS07695 5a90fe98d3c6efe520844f4b565e75ad 326 Pfam PF03462 PCRF domain 2 181 1.3E-51 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PNUC_RS07695 5a90fe98d3c6efe520844f4b565e75ad 326 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 324 6.4E-149 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PNUC_RS07695 5a90fe98d3c6efe520844f4b565e75ad 326 Gene3D G3DSA:3.30.160.20 189 267 3.8E-38 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain PNUC_RS07695 5a90fe98d3c6efe520844f4b565e75ad 326 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 206 222 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PNUC_RS07895 e45ca7f8b8f4b916ca8e098862703ce2 160 PANTHER PTHR30009 4 133 3.2E-26 T 22-04-2016 PNUC_RS07895 e45ca7f8b8f4b916ca8e098862703ce2 160 Pfam PF03918 Cytochrome C biogenesis protein 9 148 3.5E-49 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family PNUC_RS05105 4da577fc3a51722af6c49bd5cff8fa4d 151 SMART SM00116 13 60 7.8E-9 T 22-04-2016 IPR000644 CBS domain PNUC_RS05105 4da577fc3a51722af6c49bd5cff8fa4d 151 SMART SM00116 78 125 2.1 T 22-04-2016 IPR000644 CBS domain PNUC_RS05105 4da577fc3a51722af6c49bd5cff8fa4d 151 PANTHER PTHR11911 1 140 1.9E-19 T 22-04-2016 PNUC_RS05105 4da577fc3a51722af6c49bd5cff8fa4d 151 Gene3D G3DSA:3.10.580.10 1 126 3.5E-26 T 22-04-2016 PNUC_RS05105 4da577fc3a51722af6c49bd5cff8fa4d 151 SUPERFAMILY SSF54631 1 126 1.09E-26 T 22-04-2016 PNUC_RS05105 4da577fc3a51722af6c49bd5cff8fa4d 151 Pfam PF00571 CBS domain 71 124 1.7E-7 T 22-04-2016 IPR000644 CBS domain PNUC_RS05105 4da577fc3a51722af6c49bd5cff8fa4d 151 Pfam PF00571 CBS domain 14 60 2.8E-7 T 22-04-2016 IPR000644 CBS domain PNUC_RS08045 ea53a99c4285af906571c41382e1983d 311 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 6 308 2.6E-72 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PNUC_RS08045 ea53a99c4285af906571c41382e1983d 311 Gene3D G3DSA:3.40.50.720 5 190 4.3E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08045 ea53a99c4285af906571c41382e1983d 311 SUPERFAMILY SSF48179 183 306 2.28E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS08045 ea53a99c4285af906571c41382e1983d 311 Gene3D G3DSA:1.10.1040.10 191 307 1.0E-32 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PNUC_RS08045 ea53a99c4285af906571c41382e1983d 311 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 183 306 5.2E-33 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PNUC_RS08045 ea53a99c4285af906571c41382e1983d 311 Pfam PF02558 Ketopantoate reductase PanE/ApbA 7 152 9.7E-32 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PNUC_RS08045 ea53a99c4285af906571c41382e1983d 311 SUPERFAMILY SSF51735 6 154 1.82E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08045 ea53a99c4285af906571c41382e1983d 311 PANTHER PTHR21708 1 309 2.8E-58 T 22-04-2016 PNUC_RS08045 ea53a99c4285af906571c41382e1983d 311 PANTHER PTHR21708:SF24 1 309 2.8E-58 T 22-04-2016 PNUC_RS09660 31177a32def40ec0d8549c904cccc6c8 503 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 7 489 19.757 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 PNUC_RS09660 31177a32def40ec0d8549c904cccc6c8 503 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 451 6.5E-76 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 PNUC_RS09660 31177a32def40ec0d8549c904cccc6c8 503 PANTHER PTHR38686 1 498 6.5E-61 T 22-04-2016 PNUC_RS09660 31177a32def40ec0d8549c904cccc6c8 503 SUPERFAMILY SSF56317 215 483 3.4E-27 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS09660 31177a32def40ec0d8549c904cccc6c8 503 Pfam PF00795 Carbon-nitrogen hydrolase 239 473 2.0E-19 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS09660 31177a32def40ec0d8549c904cccc6c8 503 Gene3D G3DSA:3.60.110.10 218 468 1.1E-14 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS06170 1ba3a2116ffbdb23689fe8b5c48d4490 274 PANTHER PTHR10799 1 54 6.1E-28 T 22-04-2016 PNUC_RS06170 1ba3a2116ffbdb23689fe8b5c48d4490 274 PANTHER PTHR10799 136 268 6.1E-28 T 22-04-2016 PNUC_RS06170 1ba3a2116ffbdb23689fe8b5c48d4490 274 SMART SM00267 92 272 8.8E-38 T 22-04-2016 IPR000160 GGDEF domain PNUC_RS06170 1ba3a2116ffbdb23689fe8b5c48d4490 274 Gene3D G3DSA:3.30.70.270 105 270 3.6E-46 T 22-04-2016 PNUC_RS06170 1ba3a2116ffbdb23689fe8b5c48d4490 274 Pfam PF00990 Diguanylate cyclase, GGDEF domain 104 268 1.2E-35 T 22-04-2016 IPR000160 GGDEF domain PNUC_RS06170 1ba3a2116ffbdb23689fe8b5c48d4490 274 PANTHER PTHR10799:SF750 1 54 6.1E-28 T 22-04-2016 PNUC_RS06170 1ba3a2116ffbdb23689fe8b5c48d4490 274 PANTHER PTHR10799:SF750 136 268 6.1E-28 T 22-04-2016 PNUC_RS06170 1ba3a2116ffbdb23689fe8b5c48d4490 274 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 99 270 4.7E-41 T 22-04-2016 IPR000160 GGDEF domain PNUC_RS06170 1ba3a2116ffbdb23689fe8b5c48d4490 274 SUPERFAMILY SSF55073 108 270 5.81E-40 T 22-04-2016 IPR029787 Nucleotide cyclase PNUC_RS08430 3436d70e6ee3b0d71f3e2385910e5ef4 230 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 81 170 6.3E-8 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 PNUC_RS08430 3436d70e6ee3b0d71f3e2385910e5ef4 230 Gene3D G3DSA:3.30.428.30 29 186 1.8E-32 T 22-04-2016 PNUC_RS08430 3436d70e6ee3b0d71f3e2385910e5ef4 230 SUPERFAMILY SSF54197 34 218 1.29E-26 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 PNUC_RS02600 adec3068f4338824486d4ec99c5a105d 442 PIRSF PIRSF000505 6 442 2.7E-137 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS02600 adec3068f4338824486d4ec99c5a105d 442 PANTHER PTHR21090 1 441 3.5E-173 T 22-04-2016 PNUC_RS02600 adec3068f4338824486d4ec99c5a105d 442 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS02600 adec3068f4338824486d4ec99c5a105d 442 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 13 442 32.032 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS02600 adec3068f4338824486d4ec99c5a105d 442 Gene3D G3DSA:3.65.10.10 25 248 6.4E-64 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PNUC_RS02600 adec3068f4338824486d4ec99c5a105d 442 ProSitePatterns PS00885 EPSP synthase signature 2. 350 368 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS02600 adec3068f4338824486d4ec99c5a105d 442 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 17 440 8.0E-133 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PNUC_RS02600 adec3068f4338824486d4ec99c5a105d 442 Gene3D G3DSA:3.65.10.10 249 439 1.0E-63 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PNUC_RS02600 adec3068f4338824486d4ec99c5a105d 442 PANTHER PTHR21090:SF21 1 441 3.5E-173 T 22-04-2016 PNUC_RS02600 adec3068f4338824486d4ec99c5a105d 442 SUPERFAMILY SSF55205 8 439 1.7E-116 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PNUC_RS02600 adec3068f4338824486d4ec99c5a105d 442 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 435 1.3E-126 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 Pfam PF11638 DnaA N-terminal domain 4 65 1.7E-14 T 22-04-2016 IPR024633 DnaA N-terminal domain PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 Gene3D G3DSA:3.40.50.300 120 289 6.4E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 Gene3D G3DSA:1.10.1750.10 359 459 3.1E-40 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 SMART SM00382 157 291 5.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 369 437 1.4E-30 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 PANTHER PTHR30050 1 102 7.1E-189 T 22-04-2016 PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 SUPERFAMILY SSF52540 124 336 1.74E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 459 31.75 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 SMART SM00760 368 437 2.3E-41 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 ProSitePatterns PS01008 DnaA protein signature. 418 437 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 Pfam PF00308 Bacterial dnaA protein 125 341 4.6E-86 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 PANTHER PTHR30050:SF2 123 460 7.1E-189 T 22-04-2016 PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 PANTHER PTHR30050:SF2 1 102 7.1E-189 T 22-04-2016 PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 418 437 3.0E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 190 204 3.0E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 222 236 3.0E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 158 178 3.0E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 256 283 3.0E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 458 6.6E-169 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 SUPERFAMILY SSF48295 356 459 1.2E-35 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 Gene3D G3DSA:1.10.8.60 291 358 1.6E-26 T 22-04-2016 PNUC_RS00005 d382f6f4e0e50237cfa732c807c3737c 460 PANTHER PTHR30050 123 460 7.1E-189 T 22-04-2016 PNUC_RS10815 b8ff76595fb8f563d9d02c2516a74228 260 Gene3D G3DSA:1.10.760.10 67 140 1.8E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS10815 b8ff76595fb8f563d9d02c2516a74228 260 Gene3D G3DSA:1.10.760.10 184 260 4.2E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS10815 b8ff76595fb8f563d9d02c2516a74228 260 SUPERFAMILY SSF46626 70 141 6.86E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS10815 b8ff76595fb8f563d9d02c2516a74228 260 PANTHER PTHR33751:SF3 236 260 5.1E-38 T 22-04-2016 PNUC_RS10815 b8ff76595fb8f563d9d02c2516a74228 260 PANTHER PTHR33751:SF3 61 213 5.1E-38 T 22-04-2016 PNUC_RS10815 b8ff76595fb8f563d9d02c2516a74228 260 Gene3D G3DSA:1.10.760.10 141 183 8.1E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS10815 b8ff76595fb8f563d9d02c2516a74228 260 PANTHER PTHR33751 236 260 5.1E-38 T 22-04-2016 PNUC_RS10815 b8ff76595fb8f563d9d02c2516a74228 260 PANTHER PTHR33751 61 213 5.1E-38 T 22-04-2016 PNUC_RS10815 b8ff76595fb8f563d9d02c2516a74228 260 SUPERFAMILY SSF46626 154 259 4.5E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS10815 b8ff76595fb8f563d9d02c2516a74228 260 Pfam PF00034 Cytochrome c 64 140 7.4E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS10815 b8ff76595fb8f563d9d02c2516a74228 260 Pfam PF00034 Cytochrome c 158 260 6.9E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS06490 c003316706d79a34e7a689942f93b994 358 PANTHER PTHR30465:SF66 1 352 4.7E-176 T 22-04-2016 PNUC_RS06490 c003316706d79a34e7a689942f93b994 358 SUPERFAMILY SSF161098 119 334 5.49E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS06490 c003316706d79a34e7a689942f93b994 358 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 143 350 7.0E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS06490 c003316706d79a34e7a689942f93b994 358 Gene3D G3DSA:1.10.3720.10 119 341 4.8E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS06490 c003316706d79a34e7a689942f93b994 358 PANTHER PTHR30465 1 352 4.7E-176 T 22-04-2016 PNUC_RS01300 c279ed969b7020df36fc5d308a6b0999 167 Gene3D G3DSA:3.40.50.2020 25 160 1.8E-27 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS01300 c279ed969b7020df36fc5d308a6b0999 167 Pfam PF00156 Phosphoribosyl transferase domain 25 144 2.6E-14 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PNUC_RS01300 c279ed969b7020df36fc5d308a6b0999 167 PANTHER PTHR11608 25 166 2.7E-37 T 22-04-2016 PNUC_RS01300 c279ed969b7020df36fc5d308a6b0999 167 SUPERFAMILY SSF53271 24 141 9.42E-26 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS04975 cdec9e0e85194689944c94814d37c24e 291 PANTHER PTHR11614 11 280 1.3E-19 T 22-04-2016 PNUC_RS04975 cdec9e0e85194689944c94814d37c24e 291 PIRSF PIRSF017388 5 260 9.9E-26 T 22-04-2016 IPR012354 Esterase/lipase GO:0052689 PNUC_RS04975 cdec9e0e85194689944c94814d37c24e 291 Pfam PF12146 Serine aminopeptidase, S33 11 243 1.6E-12 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 PNUC_RS04975 cdec9e0e85194689944c94814d37c24e 291 Gene3D G3DSA:3.40.50.1820 8 258 3.8E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS04975 cdec9e0e85194689944c94814d37c24e 291 SUPERFAMILY SSF53474 11 258 9.13E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS06660 11629fa29e69f1492c823a056beb4bcd 251 PANTHER PTHR12029 4 246 4.8E-69 T 22-04-2016 PNUC_RS06660 11629fa29e69f1492c823a056beb4bcd 251 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 245 2.8E-71 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 PNUC_RS06660 11629fa29e69f1492c823a056beb4bcd 251 Pfam PF00588 SpoU rRNA Methylase family 99 239 1.2E-40 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PNUC_RS06660 11629fa29e69f1492c823a056beb4bcd 251 SUPERFAMILY SSF75217 95 246 3.2E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PNUC_RS06660 11629fa29e69f1492c823a056beb4bcd 251 SUPERFAMILY SSF55315 3 76 7.42E-13 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like PNUC_RS06660 11629fa29e69f1492c823a056beb4bcd 251 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 77 5.6E-14 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 PNUC_RS06660 11629fa29e69f1492c823a056beb4bcd 251 Gene3D G3DSA:3.40.1280.10 92 247 9.4E-56 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PNUC_RS06660 11629fa29e69f1492c823a056beb4bcd 251 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 246 43.169 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB PNUC_RS06660 11629fa29e69f1492c823a056beb4bcd 251 SMART SM00967 4 81 1.3E-15 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 PNUC_RS06660 11629fa29e69f1492c823a056beb4bcd 251 Gene3D G3DSA:3.30.1330.30 2 75 1.2E-15 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like PNUC_RS02820 10e04bb254840ce7d05d95e1fa53c0ff 202 SUPERFAMILY SSF47616 88 200 4.5E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS02820 10e04bb254840ce7d05d95e1fa53c0ff 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 187 1.0E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal PNUC_RS02820 10e04bb254840ce7d05d95e1fa53c0ff 202 Gene3D G3DSA:1.20.1050.10 92 190 1.6E-10 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS02820 10e04bb254840ce7d05d95e1fa53c0ff 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 76 1.0E-19 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PNUC_RS02820 10e04bb254840ce7d05d95e1fa53c0ff 202 Gene3D G3DSA:3.40.30.10 3 91 4.5E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS02820 10e04bb254840ce7d05d95e1fa53c0ff 202 PANTHER PTHR11260 1 194 1.6E-20 T 22-04-2016 PNUC_RS02820 10e04bb254840ce7d05d95e1fa53c0ff 202 SUPERFAMILY SSF52833 1 80 8.51E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 PANTHER PTHR10169 457 839 0.0 T 22-04-2016 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 PANTHER PTHR10169 2 417 0.0 T 22-04-2016 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 PANTHER PTHR10169:SF48 457 839 0.0 T 22-04-2016 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 PANTHER PTHR10169:SF48 2 417 0.0 T 22-04-2016 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 SUPERFAMILY SSF101904 545 881 5.1E-108 T 22-04-2016 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 Gene3D G3DSA:3.90.199.10 34 216 8.5E-85 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 Gene3D G3DSA:2.120.10.90 543 869 2.2E-131 T 22-04-2016 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 Gene3D G3DSA:1.10.268.10 363 504 3.0E-47 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 SUPERFAMILY SSF56719 30 521 1.83E-177 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 870 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 Gene3D G3DSA:3.30.1360.40 236 333 2.4E-40 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 823 866 6.2E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 644 1.1E-7 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 705 750 9.2E-15 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 657 700 1.1E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 773 820 1.2E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 550 597 1.2E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 SMART SM00434 11 506 9.2E-287 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 873 29.016 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS02575 c427a87ace16e82e758aa46aa349ff92 900 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 513 7.9E-156 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 SMART SM00954 216 326 2.0E-66 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 SUPERFAMILY SSF55021 600 675 2.34E-8 T 22-04-2016 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 Pfam PF13291 ACT domain 599 675 4.0E-14 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 Gene3D G3DSA:3.30.460.10 158 305 1.3E-48 T 22-04-2016 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 Pfam PF13328 HD domain 20 157 6.2E-29 T 22-04-2016 IPR003607 HD/PDEase domain PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 PANTHER PTHR21262:SF5 26 324 9.3E-211 T 22-04-2016 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 PANTHER PTHR21262:SF5 349 676 9.3E-211 T 22-04-2016 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 Gene3D G3DSA:3.30.70.260 602 674 4.1E-7 T 22-04-2016 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 PANTHER PTHR21262 26 324 9.3E-211 T 22-04-2016 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 PANTHER PTHR21262 349 676 9.3E-211 T 22-04-2016 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 Gene3D G3DSA:3.10.20.30 387 448 5.5E-22 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 SUPERFAMILY SSF109604 19 171 2.32E-25 T 22-04-2016 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 Pfam PF02824 TGS domain 387 445 4.8E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 SUPERFAMILY SSF81271 378 445 9.81E-20 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 SUPERFAMILY SSF81301 173 331 4.58E-59 T 22-04-2016 PNUC_RS04305 d214f01818c0cd2219fce68b3aecc365 676 Pfam PF04607 Region found in RelA / SpoT proteins 216 325 5.6E-38 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 PNUC_RS02135 1a4f170748cf8ec11c3bf02460dd3191 244 Pfam PF02565 Recombination protein O C terminal 87 233 1.9E-23 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PNUC_RS02135 1a4f170748cf8ec11c3bf02460dd3191 244 PANTHER PTHR33991 5 244 1.0E-37 T 22-04-2016 PNUC_RS02135 1a4f170748cf8ec11c3bf02460dd3191 244 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 163 9.7E-27 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PNUC_RS02135 1a4f170748cf8ec11c3bf02460dd3191 244 Pfam PF11967 Recombination protein O N terminal 8 81 9.2E-24 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal PNUC_RS02135 1a4f170748cf8ec11c3bf02460dd3191 244 Hamap MF_00201 DNA repair protein RecO [recO]. 5 242 22.213 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PNUC_RS02135 1a4f170748cf8ec11c3bf02460dd3191 244 SUPERFAMILY SSF50249 9 80 4.63E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02135 1a4f170748cf8ec11c3bf02460dd3191 244 Gene3D G3DSA:2.40.50.140 6 82 1.1E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS02135 1a4f170748cf8ec11c3bf02460dd3191 244 SUPERFAMILY SSF57863 89 221 3.14E-8 T 22-04-2016 PNUC_RS00170 12ecbde46a29c42ab66238a4bc8de2d8 167 PANTHER PTHR40942 1 152 9.2E-22 T 22-04-2016 PNUC_RS00170 12ecbde46a29c42ab66238a4bc8de2d8 167 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 70 147 1.2E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00170 12ecbde46a29c42ab66238a4bc8de2d8 167 Gene3D G3DSA:1.10.760.10 70 149 4.7E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00170 12ecbde46a29c42ab66238a4bc8de2d8 167 SUPERFAMILY SSF46626 61 156 1.06E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00170 12ecbde46a29c42ab66238a4bc8de2d8 167 PRINTS PR00607 Class IE cytochrome C signature 92 102 5.9E-9 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PNUC_RS00170 12ecbde46a29c42ab66238a4bc8de2d8 167 PRINTS PR00607 Class IE cytochrome C signature 120 132 5.9E-9 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PNUC_RS00170 12ecbde46a29c42ab66238a4bc8de2d8 167 PRINTS PR00607 Class IE cytochrome C signature 81 92 5.9E-9 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PNUC_RS07380 da89642759a4920a7781788c41861927 493 PANTHER PTHR33908:SF1 10 239 4.3E-13 T 22-04-2016 PNUC_RS07380 da89642759a4920a7781788c41861927 493 PANTHER PTHR33908 10 239 4.3E-13 T 22-04-2016 PNUC_RS07380 da89642759a4920a7781788c41861927 493 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 115 227 3.7E-13 T 22-04-2016 PNUC_RS02990 e61e51525b6ecfa7c94fda713e61aec4 210 PANTHER PTHR10108 13 188 4.4E-19 T 22-04-2016 PNUC_RS02990 e61e51525b6ecfa7c94fda713e61aec4 210 Gene3D G3DSA:3.40.50.150 16 203 1.3E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS02990 e61e51525b6ecfa7c94fda713e61aec4 210 SUPERFAMILY SSF53335 20 204 9.48E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS02990 e61e51525b6ecfa7c94fda713e61aec4 210 Pfam PF13489 Methyltransferase domain 38 181 3.7E-15 T 22-04-2016 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 Gene3D G3DSA:3.30.1330.20 214 320 2.9E-43 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 SMART SM00864 15 204 2.8E-99 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 335 34.614 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 327 4.5E-114 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 SUPERFAMILY SSF55307 204 319 9.39E-39 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 Gene3D G3DSA:3.40.50.1440 16 213 1.3E-82 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 PRINTS PR00423 Cell division protein FtsZ signature 125 146 7.2E-46 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 PRINTS PR00423 Cell division protein FtsZ signature 211 232 7.2E-46 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 PRINTS PR00423 Cell division protein FtsZ signature 188 210 7.2E-46 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 PRINTS PR00423 Cell division protein FtsZ signature 97 117 7.2E-46 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 Pfam PF12327 FtsZ family, C-terminal domain 221 315 7.9E-30 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 SMART SM00865 206 324 1.1E-51 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 SUPERFAMILY SSF52490 16 207 3.92E-60 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 172 9.2E-35 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 PANTHER PTHR30314:SF3 4 317 1.3E-148 T 22-04-2016 PNUC_RS00930 26139a6986e3d4be61cda772e6eb7ab4 446 PANTHER PTHR30314 4 317 1.3E-148 T 22-04-2016 PNUC_RS07595 a5fc2da4a5b2506a0425755355cf33b1 278 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 173 191 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PNUC_RS07595 a5fc2da4a5b2506a0425755355cf33b1 278 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 6 254 1.1E-92 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PNUC_RS07595 a5fc2da4a5b2506a0425755355cf33b1 278 PANTHER PTHR10804:SF75 8 257 3.9E-138 T 22-04-2016 PNUC_RS07595 a5fc2da4a5b2506a0425755355cf33b1 278 Hamap MF_01974 Methionine aminopeptidase [map]. 3 256 39.851 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PNUC_RS07595 a5fc2da4a5b2506a0425755355cf33b1 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 8.9E-16 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PNUC_RS07595 a5fc2da4a5b2506a0425755355cf33b1 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 8.9E-16 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PNUC_RS07595 a5fc2da4a5b2506a0425755355cf33b1 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 8.9E-16 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PNUC_RS07595 a5fc2da4a5b2506a0425755355cf33b1 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 167 179 8.9E-16 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PNUC_RS07595 a5fc2da4a5b2506a0425755355cf33b1 278 Pfam PF00557 Metallopeptidase family M24 14 247 2.5E-51 T 22-04-2016 IPR000994 Peptidase M24, structural domain PNUC_RS07595 a5fc2da4a5b2506a0425755355cf33b1 278 Gene3D G3DSA:3.90.230.10 8 255 8.5E-94 T 22-04-2016 IPR000994 Peptidase M24, structural domain PNUC_RS07595 a5fc2da4a5b2506a0425755355cf33b1 278 PANTHER PTHR10804 8 257 3.9E-138 T 22-04-2016 PNUC_RS07595 a5fc2da4a5b2506a0425755355cf33b1 278 SUPERFAMILY SSF55920 9 255 6.8E-86 T 22-04-2016 IPR000994 Peptidase M24, structural domain PNUC_RS08635 b2afaa3997954a87d80a075262dd3936 315 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 18 313 5.8E-102 T 22-04-2016 IPR017804 Methyltransferase EgtD-like PNUC_RS08635 b2afaa3997954a87d80a075262dd3936 315 PIRSF PIRSF018005 1 315 7.5E-98 T 22-04-2016 IPR017804 Methyltransferase EgtD-like PNUC_RS08635 b2afaa3997954a87d80a075262dd3936 315 PANTHER PTHR30468 24 312 2.6E-53 T 22-04-2016 PNUC_RS08635 b2afaa3997954a87d80a075262dd3936 315 SUPERFAMILY SSF53335 76 204 2.99E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS08635 b2afaa3997954a87d80a075262dd3936 315 SUPERFAMILY SSF53335 251 311 2.99E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS08635 b2afaa3997954a87d80a075262dd3936 315 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 189 311 1.4E-37 T 22-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent PNUC_RS08635 b2afaa3997954a87d80a075262dd3936 315 PANTHER PTHR30468:SF6 24 312 2.6E-53 T 22-04-2016 PNUC_RS08635 b2afaa3997954a87d80a075262dd3936 315 Gene3D G3DSA:3.40.50.150 250 311 1.0E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS08635 b2afaa3997954a87d80a075262dd3936 315 Gene3D G3DSA:3.40.50.150 75 196 1.0E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS03585 86047a8bd2fd982efdbf36f8f7d4a5d8 77 PANTHER PTHR37550:SF2 1 77 3.2E-28 T 22-04-2016 PNUC_RS03585 86047a8bd2fd982efdbf36f8f7d4a5d8 77 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 46 1.3E-7 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 PNUC_RS03585 86047a8bd2fd982efdbf36f8f7d4a5d8 77 PANTHER PTHR37550 1 77 3.2E-28 T 22-04-2016 PNUC_RS03585 86047a8bd2fd982efdbf36f8f7d4a5d8 77 SUPERFAMILY SSF89447 4 66 1.94E-5 T 22-04-2016 PNUC_RS06145 9cffe4feca80c1a1cbb2beede843a913 124 SUPERFAMILY SSF48452 30 79 1.18E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS06145 9cffe4feca80c1a1cbb2beede843a913 124 Gene3D G3DSA:1.25.40.10 34 78 1.2E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS08220 11e29b4dc4b69470eb2df3db7afb35b7 373 SUPERFAMILY SSF56235 32 367 2.78E-79 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS08220 11e29b4dc4b69470eb2df3db7afb35b7 373 PANTHER PTHR35527 4 360 7.5E-74 T 22-04-2016 PNUC_RS08220 11e29b4dc4b69470eb2df3db7afb35b7 373 Gene3D G3DSA:3.60.60.10 32 367 8.5E-91 T 22-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 PNUC_RS08220 11e29b4dc4b69470eb2df3db7afb35b7 373 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 32 358 1.0E-54 T 22-04-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal PNUC_RS02715 b660dfca6e8908a3ee044adc54c72951 245 Pfam PF00293 NUDIX domain 85 196 1.3E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PNUC_RS02715 b660dfca6e8908a3ee044adc54c72951 245 Gene3D G3DSA:3.90.79.10 82 243 5.6E-44 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS02715 b660dfca6e8908a3ee044adc54c72951 245 SUPERFAMILY SSF55811 82 236 9.48E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS02715 b660dfca6e8908a3ee044adc54c72951 245 PANTHER PTHR12992 40 239 3.5E-56 T 22-04-2016 PNUC_RS00275 24b8534b0e4c93e158abce9eb7ded3f3 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 24.199 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00275 24b8534b0e4c93e158abce9eb7ded3f3 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 5.9E-48 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00275 24b8534b0e4c93e158abce9eb7ded3f3 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 1.3E-18 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00275 24b8534b0e4c93e158abce9eb7ded3f3 124 SUPERFAMILY SSF48300 3 60 4.32E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00275 24b8534b0e4c93e158abce9eb7ded3f3 124 SUPERFAMILY SSF54736 53 124 2.62E-23 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PNUC_RS00275 24b8534b0e4c93e158abce9eb7ded3f3 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 2.6E-29 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 PNUC_RS00275 24b8534b0e4c93e158abce9eb7ded3f3 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 98 3.0E-13 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 PNUC_RS00275 24b8534b0e4c93e158abce9eb7ded3f3 124 Gene3D G3DSA:1.20.5.710 2 52 3.6E-23 T 22-04-2016 PNUC_RS00275 24b8534b0e4c93e158abce9eb7ded3f3 124 Gene3D G3DSA:3.30.1390.10 53 124 4.3E-32 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PNUC_RS05765 fe080ff6082aa4e1754a8eff3d074249 375 PANTHER PTHR30573 25 374 1.9E-141 T 22-04-2016 PNUC_RS05765 fe080ff6082aa4e1754a8eff3d074249 375 Pfam PF02445 Quinolinate synthetase A protein 46 352 6.5E-101 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PNUC_RS05765 fe080ff6082aa4e1754a8eff3d074249 375 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 44 354 5.5E-106 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PNUC_RS05765 fe080ff6082aa4e1754a8eff3d074249 375 SUPERFAMILY SSF142754 43 353 1.26E-106 T 22-04-2016 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 TIGRFAM TIGR01393 lepA: elongation factor 4 4 600 7.9E-297 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 Pfam PF00009 Elongation factor Tu GTP binding domain 4 181 2.7E-53 T 22-04-2016 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 Pfam PF03144 Elongation factor Tu domain 2 205 275 7.5E-10 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 PANTHER PTHR23115:SF175 402 600 2.7E-280 T 22-04-2016 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 PANTHER PTHR23115:SF175 2 378 2.7E-280 T 22-04-2016 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 SUPERFAMILY SSF52540 3 205 4.32E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 Gene3D G3DSA:3.40.50.300 4 193 4.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 Gene3D G3DSA:3.30.70.870 296 374 5.4E-25 T 22-04-2016 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 SUPERFAMILY SSF50447 182 277 7.69E-20 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 SMART SM00838 403 490 5.3E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 Pfam PF06421 GTP-binding protein LepA C-terminus 492 598 2.0E-50 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 Pfam PF00679 Elongation factor G C-terminus 404 489 4.0E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 Gene3D G3DSA:3.30.70.240 406 494 8.9E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 175 2.3E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 SUPERFAMILY SSF54980 404 498 1.39E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 Hamap MF_00071 Elongation factor 4 [lepA]. 1 601 302.055 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 SUPERFAMILY SSF54980 297 375 1.55E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 Gene3D G3DSA:2.40.30.10 194 295 3.0E-21 T 22-04-2016 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 PANTHER PTHR23115 402 600 2.7E-280 T 22-04-2016 PNUC_RS02115 32b6a844c26609a9d99b686dce5ae5e8 601 PANTHER PTHR23115 2 378 2.7E-280 T 22-04-2016 PNUC_RS01715 722f33e6fbe54a8e6c263f8957027bf4 249 SUPERFAMILY SSF51735 5 246 8.63E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01715 722f33e6fbe54a8e6c263f8957027bf4 249 Pfam PF00106 short chain dehydrogenase 5 196 1.4E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01715 722f33e6fbe54a8e6c263f8957027bf4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01715 722f33e6fbe54a8e6c263f8957027bf4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01715 722f33e6fbe54a8e6c263f8957027bf4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01715 722f33e6fbe54a8e6c263f8957027bf4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01715 722f33e6fbe54a8e6c263f8957027bf4 249 PANTHER PTHR24322 155 187 1.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01715 722f33e6fbe54a8e6c263f8957027bf4 249 PANTHER PTHR24322 9 139 1.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS01715 722f33e6fbe54a8e6c263f8957027bf4 249 Gene3D G3DSA:3.40.50.720 5 239 2.7E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS00830 d47e0a755c55c69a7e144f0c8d94701f 396 PANTHER PTHR11014:SF63 6 395 5.2E-160 T 22-04-2016 PNUC_RS00830 d47e0a755c55c69a7e144f0c8d94701f 396 PANTHER PTHR11014 6 395 5.2E-160 T 22-04-2016 PNUC_RS00830 d47e0a755c55c69a7e144f0c8d94701f 396 PIRSF PIRSF005962 2 396 1.6E-133 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 PNUC_RS00830 d47e0a755c55c69a7e144f0c8d94701f 396 SUPERFAMILY SSF55031 184 297 1.44E-30 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PNUC_RS00830 d47e0a755c55c69a7e144f0c8d94701f 396 SUPERFAMILY SSF53187 299 395 9.71E-89 T 22-04-2016 PNUC_RS00830 d47e0a755c55c69a7e144f0c8d94701f 396 SUPERFAMILY SSF53187 3 198 9.71E-89 T 22-04-2016 PNUC_RS00830 d47e0a755c55c69a7e144f0c8d94701f 396 Gene3D G3DSA:3.30.70.360 182 298 2.2E-41 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PNUC_RS00830 d47e0a755c55c69a7e144f0c8d94701f 396 Pfam PF07687 Peptidase dimerisation domain 186 281 9.0E-9 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PNUC_RS00830 d47e0a755c55c69a7e144f0c8d94701f 396 Gene3D G3DSA:3.40.630.10 299 395 4.1E-102 T 22-04-2016 PNUC_RS00830 d47e0a755c55c69a7e144f0c8d94701f 396 Gene3D G3DSA:3.40.630.10 5 179 4.1E-102 T 22-04-2016 PNUC_RS00830 d47e0a755c55c69a7e144f0c8d94701f 396 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 382 2.8E-112 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 PNUC_RS00830 d47e0a755c55c69a7e144f0c8d94701f 396 Pfam PF01546 Peptidase family M20/M25/M40 74 392 1.9E-38 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PNUC_RS09270 8540f4e3fd8fdba2c22de86521c79332 289 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 15 115 1.3E-15 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PNUC_RS09270 8540f4e3fd8fdba2c22de86521c79332 289 PANTHER PTHR11645 11 289 1.1E-95 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PNUC_RS09270 8540f4e3fd8fdba2c22de86521c79332 289 PANTHER PTHR11645:SF0 11 289 1.1E-95 T 22-04-2016 PNUC_RS09270 8540f4e3fd8fdba2c22de86521c79332 289 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 15 281 4.0E-78 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PNUC_RS09270 8540f4e3fd8fdba2c22de86521c79332 289 PIRSF PIRSF000193 12 285 1.5E-69 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PNUC_RS09270 8540f4e3fd8fdba2c22de86521c79332 289 SUPERFAMILY SSF51735 15 175 1.13E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS09270 8540f4e3fd8fdba2c22de86521c79332 289 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 178 282 7.2E-34 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PNUC_RS09270 8540f4e3fd8fdba2c22de86521c79332 289 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 238 260 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PNUC_RS09270 8540f4e3fd8fdba2c22de86521c79332 289 Gene3D G3DSA:3.40.50.720 12 175 1.5E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS09270 8540f4e3fd8fdba2c22de86521c79332 289 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 13 282 25.592 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PNUC_RS09270 8540f4e3fd8fdba2c22de86521c79332 289 SUPERFAMILY SSF48179 177 285 5.95E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS09270 8540f4e3fd8fdba2c22de86521c79332 289 Gene3D G3DSA:1.10.3730.10 177 281 5.7E-36 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PNUC_RS04350 d4c0ac4c69b01e5a57e17a9f37ded4a6 116 PANTHER PTHR30204:SF15 19 112 1.1E-27 T 22-04-2016 PNUC_RS04350 d4c0ac4c69b01e5a57e17a9f37ded4a6 116 Gene3D G3DSA:1.10.1660.10 24 95 2.1E-17 T 22-04-2016 PNUC_RS04350 d4c0ac4c69b01e5a57e17a9f37ded4a6 116 SUPERFAMILY SSF46955 25 112 2.01E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain PNUC_RS04350 d4c0ac4c69b01e5a57e17a9f37ded4a6 116 PANTHER PTHR30204 19 112 1.1E-27 T 22-04-2016 PNUC_RS04350 d4c0ac4c69b01e5a57e17a9f37ded4a6 116 SMART SM00422 27 97 9.9E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PNUC_RS04350 d4c0ac4c69b01e5a57e17a9f37ded4a6 116 Pfam PF13411 MerR HTH family regulatory protein 27 96 1.1E-22 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PNUC_RS02875 cdc55cd0c96a5f6750103be87ed7fc73 437 PRINTS PR00762 Chloride channel signature 89 106 1.5E-22 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 PNUC_RS02875 cdc55cd0c96a5f6750103be87ed7fc73 437 PRINTS PR00762 Chloride channel signature 333 353 1.5E-22 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 PNUC_RS02875 cdc55cd0c96a5f6750103be87ed7fc73 437 PRINTS PR00762 Chloride channel signature 371 387 1.5E-22 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 PNUC_RS02875 cdc55cd0c96a5f6750103be87ed7fc73 437 PRINTS PR00762 Chloride channel signature 169 188 1.5E-22 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 PNUC_RS02875 cdc55cd0c96a5f6750103be87ed7fc73 437 PRINTS PR00762 Chloride channel signature 389 408 1.5E-22 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 PNUC_RS02875 cdc55cd0c96a5f6750103be87ed7fc73 437 PANTHER PTHR11689 17 435 3.8E-62 T 22-04-2016 PNUC_RS02875 cdc55cd0c96a5f6750103be87ed7fc73 437 Pfam PF00654 Voltage gated chloride channel 79 418 8.1E-75 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 PNUC_RS02875 cdc55cd0c96a5f6750103be87ed7fc73 437 Gene3D G3DSA:1.10.3080.10 14 433 4.3E-80 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 PNUC_RS02875 cdc55cd0c96a5f6750103be87ed7fc73 437 SUPERFAMILY SSF81340 15 433 4.58E-84 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 PNUC_RS02875 cdc55cd0c96a5f6750103be87ed7fc73 437 PANTHER PTHR11689:SF96 17 435 3.8E-62 T 22-04-2016 PNUC_RS08980 f47fc470c12eb9541b3e6f2fa1ba94cf 257 SUPERFAMILY SSF52540 6 253 7.34E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08980 f47fc470c12eb9541b3e6f2fa1ba94cf 257 PANTHER PTHR24220 8 113 6.6E-110 T 22-04-2016 PNUC_RS08980 f47fc470c12eb9541b3e6f2fa1ba94cf 257 PANTHER PTHR24220 129 257 6.6E-110 T 22-04-2016 PNUC_RS08980 f47fc470c12eb9541b3e6f2fa1ba94cf 257 SMART SM00382 31 212 2.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS08980 f47fc470c12eb9541b3e6f2fa1ba94cf 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 253 2.3E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PNUC_RS08980 f47fc470c12eb9541b3e6f2fa1ba94cf 257 Gene3D G3DSA:3.40.50.300 5 252 3.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08980 f47fc470c12eb9541b3e6f2fa1ba94cf 257 Pfam PF00005 ABC transporter 22 182 7.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS08980 f47fc470c12eb9541b3e6f2fa1ba94cf 257 PANTHER PTHR24220:SF358 8 113 6.6E-110 T 22-04-2016 PNUC_RS08980 f47fc470c12eb9541b3e6f2fa1ba94cf 257 PANTHER PTHR24220:SF358 129 257 6.6E-110 T 22-04-2016 PNUC_RS09285 d6afaa1bca1e01306c63759020858840 348 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 45.69 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS09285 d6afaa1bca1e01306c63759020858840 348 PANTHER PTHR30307 2 347 2.4E-158 T 22-04-2016 PNUC_RS09285 d6afaa1bca1e01306c63759020858840 348 Gene3D G3DSA:3.40.1780.10 182 340 3.8E-96 T 22-04-2016 PNUC_RS09285 d6afaa1bca1e01306c63759020858840 348 Gene3D G3DSA:3.40.1780.10 1 65 3.8E-96 T 22-04-2016 PNUC_RS09285 d6afaa1bca1e01306c63759020858840 348 Gene3D G3DSA:2.40.10.240 67 127 3.6E-10 T 22-04-2016 PNUC_RS09285 d6afaa1bca1e01306c63759020858840 348 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 2.2E-128 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS09285 d6afaa1bca1e01306c63759020858840 348 SUPERFAMILY SSF111337 1 340 2.09E-128 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS09285 d6afaa1bca1e01306c63759020858840 348 PANTHER PTHR30307:SF0 2 347 2.4E-158 T 22-04-2016 PNUC_RS09285 d6afaa1bca1e01306c63759020858840 348 Pfam PF02547 Queuosine biosynthesis protein 3 340 9.3E-129 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS01840 b58451cdfcd94f2b786c24ae3b833339 192 Pfam PF03729 Short repeat of unknown function (DUF308) 30 96 1.6E-7 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane PNUC_RS01840 b58451cdfcd94f2b786c24ae3b833339 192 Pfam PF03729 Short repeat of unknown function (DUF308) 87 154 2.7E-11 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane PNUC_RS01840 b58451cdfcd94f2b786c24ae3b833339 192 PANTHER PTHR34989:SF1 30 190 2.2E-21 T 22-04-2016 PNUC_RS01840 b58451cdfcd94f2b786c24ae3b833339 192 PANTHER PTHR34989 30 190 2.2E-21 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 SUPERFAMILY SSF52317 1 186 4.95E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 Gene3D G3DSA:3.40.50.880 2 186 3.0E-69 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 Pfam PF00117 Glutamine amidotransferase class-I 4 185 2.8E-58 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.3E-13 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.3E-13 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.3E-13 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PANTHER PTHR11922:SF7 1 186 1.3E-97 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 3.4E-84 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PRINTS PR00097 Anthranilate synthase component II signature 74 85 6.3E-36 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PRINTS PR00097 Anthranilate synthase component II signature 119 131 6.3E-36 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PRINTS PR00097 Anthranilate synthase component II signature 47 56 6.3E-36 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PRINTS PR00097 Anthranilate synthase component II signature 164 177 6.3E-36 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PRINTS PR00097 Anthranilate synthase component II signature 2 16 6.3E-36 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PRINTS PR00097 Anthranilate synthase component II signature 99 107 6.3E-36 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PANTHER PTHR11922 1 186 1.3E-97 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.0E-5 T 22-04-2016 PNUC_RS00800 3135405f501d0f14009a253edddb0016 188 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.0E-5 T 22-04-2016 PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 2.4E-55 T 22-04-2016 PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 SUPERFAMILY SSF51735 7 253 4.58E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 Gene3D G3DSA:3.40.50.720 4 253 6.1E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PANTHER PTHR24322:SF513 16 144 9.0E-49 T 22-04-2016 PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PANTHER PTHR24322:SF513 160 192 9.0E-49 T 22-04-2016 PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 2.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 2.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PANTHER PTHR24322 16 144 9.0E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PANTHER PTHR24322 160 192 9.0E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.5E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.5E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.5E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.5E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.5E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS00060 4200ae215b15eb3cfd22c500330aad47 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.5E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS05850 d3970960c811d7539870fa3bee9d3a36 368 SUPERFAMILY SSF52540 176 340 3.35E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05850 d3970960c811d7539870fa3bee9d3a36 368 SUPERFAMILY SSF52540 3 131 3.35E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05850 d3970960c811d7539870fa3bee9d3a36 368 Gene3D G3DSA:3.40.50.300 1 184 1.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05850 d3970960c811d7539870fa3bee9d3a36 368 Gene3D G3DSA:3.40.50.300 218 337 1.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05850 d3970960c811d7539870fa3bee9d3a36 368 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 42 322 9.4E-19 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS07405 372683a259fe00fffa3382615be73470 187 SUPERFAMILY SSF55136 2 185 5.23E-54 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain PNUC_RS07405 372683a259fe00fffa3382615be73470 187 Pfam PF04832 SOUL heme-binding protein 3 183 1.4E-47 T 22-04-2016 IPR006917 SOUL haem-binding protein PNUC_RS07405 372683a259fe00fffa3382615be73470 187 PANTHER PTHR11220 1 72 4.6E-39 T 22-04-2016 IPR006917 SOUL haem-binding protein PNUC_RS07405 372683a259fe00fffa3382615be73470 187 PANTHER PTHR11220 92 187 4.6E-39 T 22-04-2016 IPR006917 SOUL haem-binding protein PNUC_RS00095 1cb54f66a0deedff79ed132e53f410b7 164 Pfam PF03899 ATP synthase I chain 48 151 1.1E-21 T 22-04-2016 IPR005598 ATP synthase protein I PNUC_RS03225 88a2ffde5a9c5aeba750a37034365265 239 PANTHER PTHR12532:SF0 1 239 7.9E-111 T 22-04-2016 PNUC_RS03225 88a2ffde5a9c5aeba750a37034365265 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.214 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like PNUC_RS03225 88a2ffde5a9c5aeba750a37034365265 239 SUPERFAMILY SSF75625 3 237 3.66E-96 T 22-04-2016 IPR029072 YebC-like PNUC_RS03225 88a2ffde5a9c5aeba750a37034365265 239 Gene3D G3DSA:3.30.70.980 135 205 7.2E-24 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 PNUC_RS03225 88a2ffde5a9c5aeba750a37034365265 239 Pfam PF01709 Transcriptional regulator 5 237 2.6E-93 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like PNUC_RS03225 88a2ffde5a9c5aeba750a37034365265 239 Gene3D G3DSA:3.30.1270.10 212 238 2.8E-38 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 PNUC_RS03225 88a2ffde5a9c5aeba750a37034365265 239 Gene3D G3DSA:3.30.1270.10 82 134 2.8E-38 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 PNUC_RS03225 88a2ffde5a9c5aeba750a37034365265 239 Gene3D G3DSA:1.10.10.200 1 78 8.6E-37 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like PNUC_RS03225 88a2ffde5a9c5aeba750a37034365265 239 PANTHER PTHR12532 1 239 7.9E-111 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like PNUC_RS03225 88a2ffde5a9c5aeba750a37034365265 239 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 8.5E-96 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like PNUC_RS00090 736114fe200c69fc247fa61da69dd859 296 SMART SM00470 31 121 2.5E-27 T 22-04-2016 IPR003115 ParB/Sulfiredoxin PNUC_RS00090 736114fe200c69fc247fa61da69dd859 296 PANTHER PTHR33375 1 296 6.6E-88 T 22-04-2016 PNUC_RS00090 736114fe200c69fc247fa61da69dd859 296 SUPERFAMILY SSF109709 114 219 1.44E-32 T 22-04-2016 PNUC_RS00090 736114fe200c69fc247fa61da69dd859 296 Gene3D G3DSA:3.90.1530.10 24 127 6.9E-36 T 22-04-2016 PNUC_RS00090 736114fe200c69fc247fa61da69dd859 296 Pfam PF02195 ParB-like nuclease domain 33 120 2.8E-23 T 22-04-2016 IPR003115 ParB/Sulfiredoxin PNUC_RS00090 736114fe200c69fc247fa61da69dd859 296 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 32 205 1.9E-55 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 PNUC_RS00090 736114fe200c69fc247fa61da69dd859 296 SUPERFAMILY SSF110849 32 123 2.41E-26 T 22-04-2016 IPR003115 ParB/Sulfiredoxin PNUC_RS09230 a36a7367931b3c25467fd848b6d4238c 277 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 162 182 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site PNUC_RS09230 a36a7367931b3c25467fd848b6d4238c 277 PANTHER PTHR23088:SF27 10 276 2.8E-85 T 22-04-2016 PNUC_RS09230 a36a7367931b3c25467fd848b6d4238c 277 SUPERFAMILY SSF56317 10 275 4.06E-71 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS09230 a36a7367931b3c25467fd848b6d4238c 277 PANTHER PTHR23088 10 276 2.8E-85 T 22-04-2016 PNUC_RS09230 a36a7367931b3c25467fd848b6d4238c 277 Gene3D G3DSA:3.60.110.10 9 276 5.7E-75 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS09230 a36a7367931b3c25467fd848b6d4238c 277 Pfam PF00795 Carbon-nitrogen hydrolase 11 251 2.0E-52 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PNUC_RS00630 daba87a7d45e644ea3d0375405cd0eb8 118 PANTHER PTHR23089 5 112 2.7E-42 T 22-04-2016 IPR001310 Histidine triad (HIT) protein PNUC_RS00630 daba87a7d45e644ea3d0375405cd0eb8 118 Pfam PF01230 HIT domain 17 112 9.6E-24 T 22-04-2016 IPR001310 Histidine triad (HIT) protein PNUC_RS00630 daba87a7d45e644ea3d0375405cd0eb8 118 SUPERFAMILY SSF54197 4 114 2.13E-33 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 PNUC_RS00630 daba87a7d45e644ea3d0375405cd0eb8 118 Gene3D G3DSA:3.30.428.10 2 114 2.8E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 PNUC_RS00630 daba87a7d45e644ea3d0375405cd0eb8 118 PRINTS PR00332 Histidine triad family signature 8 24 1.7E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein PNUC_RS00630 daba87a7d45e644ea3d0375405cd0eb8 118 PRINTS PR00332 Histidine triad family signature 100 110 1.7E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein PNUC_RS00630 daba87a7d45e644ea3d0375405cd0eb8 118 PRINTS PR00332 Histidine triad family signature 29 47 1.7E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein PNUC_RS00630 daba87a7d45e644ea3d0375405cd0eb8 118 PANTHER PTHR23089:SF2 5 112 2.7E-42 T 22-04-2016 PNUC_RS00630 daba87a7d45e644ea3d0375405cd0eb8 118 ProSitePatterns PS00892 HIT domain signature. 93 111 - T 22-04-2016 IPR019808 Histidine triad, conserved site PNUC_RS00040 79f9096511f77dda22f5adaddfec46db 400 PANTHER PTHR30483 1 400 3.4E-187 T 22-04-2016 PNUC_RS00040 79f9096511f77dda22f5adaddfec46db 400 PANTHER PTHR30483:SF17 1 400 3.4E-187 T 22-04-2016 PNUC_RS00040 79f9096511f77dda22f5adaddfec46db 400 Gene3D G3DSA:3.40.50.2300 155 301 2.8E-16 T 22-04-2016 PNUC_RS00040 79f9096511f77dda22f5adaddfec46db 400 Pfam PF13458 Periplasmic binding protein 27 363 2.2E-89 T 22-04-2016 IPR028081 Leucine-binding protein domain PNUC_RS00040 79f9096511f77dda22f5adaddfec46db 400 Gene3D G3DSA:3.40.50.2300 302 352 1.0E-34 T 22-04-2016 PNUC_RS00040 79f9096511f77dda22f5adaddfec46db 400 Gene3D G3DSA:3.40.50.2300 22 151 1.0E-34 T 22-04-2016 PNUC_RS00040 79f9096511f77dda22f5adaddfec46db 400 SUPERFAMILY SSF53822 27 396 5.72E-92 T 22-04-2016 IPR028082 Periplasmic binding protein-like I PNUC_RS10470 c42b400c230ebb1a5dbbb3b1a7e110b7 635 SUPERFAMILY SSF56601 262 623 1.62E-101 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS10470 c42b400c230ebb1a5dbbb3b1a7e110b7 635 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 15 621 1.8E-218 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 PNUC_RS10470 c42b400c230ebb1a5dbbb3b1a7e110b7 635 Gene3D G3DSA:3.40.710.10 261 623 5.4E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS10470 c42b400c230ebb1a5dbbb3b1a7e110b7 635 SUPERFAMILY SSF56519 52 260 1.2E-39 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PNUC_RS10470 c42b400c230ebb1a5dbbb3b1a7e110b7 635 Pfam PF00905 Penicillin binding protein transpeptidase domain 278 616 7.6E-74 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PNUC_RS10470 c42b400c230ebb1a5dbbb3b1a7e110b7 635 Pfam PF03717 Penicillin-binding Protein dimerisation domain 59 246 5.8E-34 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PNUC_RS10470 c42b400c230ebb1a5dbbb3b1a7e110b7 635 PANTHER PTHR30627:SF2 1 191 6.5E-198 T 22-04-2016 PNUC_RS10470 c42b400c230ebb1a5dbbb3b1a7e110b7 635 PANTHER PTHR30627:SF2 207 630 6.5E-198 T 22-04-2016 PNUC_RS10470 c42b400c230ebb1a5dbbb3b1a7e110b7 635 PANTHER PTHR30627 1 191 6.5E-198 T 22-04-2016 PNUC_RS10470 c42b400c230ebb1a5dbbb3b1a7e110b7 635 PANTHER PTHR30627 207 630 6.5E-198 T 22-04-2016 PNUC_RS10470 c42b400c230ebb1a5dbbb3b1a7e110b7 635 Gene3D G3DSA:3.90.1310.10 128 259 3.8E-31 T 22-04-2016 PNUC_RS04435 bf61dc5877436a6fdf7a797e6cd3e43e 250 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 9 245 4.2E-53 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PNUC_RS04435 bf61dc5877436a6fdf7a797e6cd3e43e 250 Gene3D G3DSA:3.40.1280.10 9 168 5.3E-26 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PNUC_RS04435 bf61dc5877436a6fdf7a797e6cd3e43e 250 Pfam PF00588 SpoU rRNA Methylase family 11 162 4.4E-31 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PNUC_RS04435 bf61dc5877436a6fdf7a797e6cd3e43e 250 SUPERFAMILY SSF75217 11 167 1.11E-29 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PNUC_RS04435 bf61dc5877436a6fdf7a797e6cd3e43e 250 PIRSF PIRSF004808 5 249 1.7E-60 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PNUC_RS04435 bf61dc5877436a6fdf7a797e6cd3e43e 250 PANTHER PTHR12029:SF54 12 189 2.1E-18 T 22-04-2016 PNUC_RS04435 bf61dc5877436a6fdf7a797e6cd3e43e 250 PANTHER PTHR12029 12 189 2.1E-18 T 22-04-2016 PNUC_RS08880 40db37a53359da0cd7000ed540d335f5 368 PANTHER PTHR21266:SF2 17 363 6.8E-42 T 22-04-2016 PNUC_RS08880 40db37a53359da0cd7000ed540d335f5 368 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 94 114 9.8E-6 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PNUC_RS08880 40db37a53359da0cd7000ed540d335f5 368 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 24 49 9.8E-6 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PNUC_RS08880 40db37a53359da0cd7000ed540d335f5 368 PANTHER PTHR21266 17 363 6.8E-42 T 22-04-2016 PNUC_RS08880 40db37a53359da0cd7000ed540d335f5 368 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 161 363 6.6E-34 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PNUC_RS08880 40db37a53359da0cd7000ed540d335f5 368 SUPERFAMILY SSF55961 158 364 1.33E-44 T 22-04-2016 PNUC_RS08880 40db37a53359da0cd7000ed540d335f5 368 Pfam PF00355 Rieske [2Fe-2S] domain 43 119 5.0E-10 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PNUC_RS08880 40db37a53359da0cd7000ed540d335f5 368 SUPERFAMILY SSF50022 5 140 1.14E-33 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PNUC_RS08880 40db37a53359da0cd7000ed540d335f5 368 Gene3D G3DSA:3.90.380.10 137 361 1.5E-11 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PNUC_RS08880 40db37a53359da0cd7000ed540d335f5 368 Gene3D G3DSA:2.102.10.10 42 136 4.3E-24 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PNUC_RS03520 52f935f31ea10d77b7967cb876cd0781 417 SUPERFAMILY SSF103473 3 410 2.75E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS03520 52f935f31ea10d77b7967cb876cd0781 417 Gene3D G3DSA:1.20.1250.20 8 187 1.5E-21 T 22-04-2016 PNUC_RS03520 52f935f31ea10d77b7967cb876cd0781 417 PANTHER PTHR11360:SF3 8 414 1.2E-84 T 22-04-2016 PNUC_RS03520 52f935f31ea10d77b7967cb876cd0781 417 Pfam PF07690 Major Facilitator Superfamily 17 255 7.3E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS03520 52f935f31ea10d77b7967cb876cd0781 417 PANTHER PTHR11360 8 414 1.2E-84 T 22-04-2016 PNUC_RS03520 52f935f31ea10d77b7967cb876cd0781 417 Gene3D G3DSA:1.20.1250.20 213 410 8.9E-17 T 22-04-2016 PNUC_RS03520 52f935f31ea10d77b7967cb876cd0781 417 TIGRFAM TIGR04259 oxa_formateAnti: oxalate/formate antiporter 8 410 2.1E-182 T 22-04-2016 IPR026355 Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021 PNUC_RS07495 dc60a81f099c5d9008843b3b1e51e44f 261 SUPERFAMILY SSF53098 91 257 7.13E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS07495 dc60a81f099c5d9008843b3b1e51e44f 261 Gene3D G3DSA:3.30.420.10 92 250 1.5E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS07495 dc60a81f099c5d9008843b3b1e51e44f 261 Pfam PF13276 HTH-like domain 24 75 8.4E-19 T 22-04-2016 IPR025948 HTH-like domain PNUC_RS07495 dc60a81f099c5d9008843b3b1e51e44f 261 Pfam PF00665 Integrase core domain 98 212 5.7E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PNUC_RS07495 dc60a81f099c5d9008843b3b1e51e44f 261 PANTHER PTHR32552 1 256 5.0E-75 T 22-04-2016 PNUC_RS01570 dc60a81f099c5d9008843b3b1e51e44f 261 SUPERFAMILY SSF53098 91 257 7.13E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS01570 dc60a81f099c5d9008843b3b1e51e44f 261 Gene3D G3DSA:3.30.420.10 92 250 1.5E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS01570 dc60a81f099c5d9008843b3b1e51e44f 261 Pfam PF13276 HTH-like domain 24 75 8.4E-19 T 22-04-2016 IPR025948 HTH-like domain PNUC_RS01570 dc60a81f099c5d9008843b3b1e51e44f 261 Pfam PF00665 Integrase core domain 98 212 5.7E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PNUC_RS01570 dc60a81f099c5d9008843b3b1e51e44f 261 PANTHER PTHR32552 1 256 5.0E-75 T 22-04-2016 PNUC_RS06785 b54e38a03b1add8b1c9efb056b99a566 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 23 225 2.5E-39 T 22-04-2016 PNUC_RS06785 b54e38a03b1add8b1c9efb056b99a566 233 PANTHER PTHR23291 5 232 1.2E-34 T 22-04-2016 IPR006214 Bax inhibitor 1-related PNUC_RS10525 46889559eba8005e99c21829fb065847 245 Pfam PF00849 RNA pseudouridylate synthase 66 209 8.4E-12 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS10525 46889559eba8005e99c21829fb065847 245 Gene3D G3DSA:3.10.290.10 3 54 3.4E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS10525 46889559eba8005e99c21829fb065847 245 SUPERFAMILY SSF55174 5 84 8.77E-13 T 22-04-2016 PNUC_RS10525 46889559eba8005e99c21829fb065847 245 SMART SM00363 5 62 4.4E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS10525 46889559eba8005e99c21829fb065847 245 PANTHER PTHR21600:SF25 1 243 9.0E-69 T 22-04-2016 PNUC_RS10525 46889559eba8005e99c21829fb065847 245 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 105 239 6.6E-40 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PNUC_RS10525 46889559eba8005e99c21829fb065847 245 SUPERFAMILY SSF55120 65 243 1.52E-39 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS10525 46889559eba8005e99c21829fb065847 245 PANTHER PTHR21600 1 243 9.0E-69 T 22-04-2016 PNUC_RS10525 46889559eba8005e99c21829fb065847 245 Pfam PF01479 S4 domain 6 42 1.2E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS08630 40c87a25dcd60d4e999877c1403ebe9f 93 Pfam PF04248 Domain of unknown function (DUF427) 1 87 5.9E-33 T 22-04-2016 IPR007361 Domain of unknown function DUF427 PNUC_RS08630 40c87a25dcd60d4e999877c1403ebe9f 93 PANTHER PTHR34310:SF1 1 91 7.1E-42 T 22-04-2016 PNUC_RS08630 40c87a25dcd60d4e999877c1403ebe9f 93 PANTHER PTHR34310 1 91 7.1E-42 T 22-04-2016 PNUC_RS08405 0d72d5ed541e7e51b5635021bdfdd300 328 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 322 9.2E-85 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PNUC_RS08405 0d72d5ed541e7e51b5635021bdfdd300 328 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 7 324 2.1E-35 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PNUC_RS08405 0d72d5ed541e7e51b5635021bdfdd300 328 PANTHER PTHR30365:SF4 1 322 1.0E-109 T 22-04-2016 PNUC_RS08405 0d72d5ed541e7e51b5635021bdfdd300 328 PANTHER PTHR30365 1 322 1.0E-109 T 22-04-2016 PNUC_RS01860 b23874b1adddf33307e28b01cfe81c06 307 PANTHER PTHR32322 8 302 1.2E-57 T 22-04-2016 PNUC_RS01860 b23874b1adddf33307e28b01cfe81c06 307 PANTHER PTHR32322:SF9 8 302 1.2E-57 T 22-04-2016 PNUC_RS01860 b23874b1adddf33307e28b01cfe81c06 307 SUPERFAMILY SSF103481 197 297 1.7E-8 T 22-04-2016 PNUC_RS01860 b23874b1adddf33307e28b01cfe81c06 307 SUPERFAMILY SSF103481 52 146 3.79E-9 T 22-04-2016 PNUC_RS01860 b23874b1adddf33307e28b01cfe81c06 307 Pfam PF00892 EamA-like transporter family 154 294 6.1E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PNUC_RS01860 b23874b1adddf33307e28b01cfe81c06 307 Pfam PF00892 EamA-like transporter family 19 143 9.2E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PNUC_RS06500 f35cab0bdddda208c465f21d6d43d49b 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.3E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS06500 f35cab0bdddda208c465f21d6d43d49b 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.3E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS06500 f35cab0bdddda208c465f21d6d43d49b 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.3E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS06500 f35cab0bdddda208c465f21d6d43d49b 261 SUPERFAMILY SSF51735 6 252 5.61E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS06500 f35cab0bdddda208c465f21d6d43d49b 261 Gene3D G3DSA:3.40.50.720 6 201 1.5E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS06500 f35cab0bdddda208c465f21d6d43d49b 261 PANTHER PTHR24322:SF317 159 191 1.5E-55 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PNUC_RS06500 f35cab0bdddda208c465f21d6d43d49b 261 PANTHER PTHR24322:SF317 11 143 1.5E-55 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PNUC_RS06500 f35cab0bdddda208c465f21d6d43d49b 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 1.2E-80 T 22-04-2016 PNUC_RS06500 f35cab0bdddda208c465f21d6d43d49b 261 PIRSF PIRSF000094 1 260 8.2E-111 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PNUC_RS06500 f35cab0bdddda208c465f21d6d43d49b 261 PANTHER PTHR24322 159 191 1.5E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS06500 f35cab0bdddda208c465f21d6d43d49b 261 PANTHER PTHR24322 11 143 1.5E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS03430 789b9b053e5429a709b69116a5a7b77c 191 PANTHER PTHR38683 23 187 2.4E-22 T 22-04-2016 PNUC_RS03430 789b9b053e5429a709b69116a5a7b77c 191 SUPERFAMILY SSF64288 20 187 4.41E-36 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PNUC_RS03430 789b9b053e5429a709b69116a5a7b77c 191 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 9 187 21.619 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 PNUC_RS03430 789b9b053e5429a709b69116a5a7b77c 191 Gene3D G3DSA:3.40.1410.10 16 185 1.6E-43 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PNUC_RS03430 789b9b053e5429a709b69116a5a7b77c 191 Pfam PF04345 Chorismate lyase 18 184 2.2E-26 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 PNUC_RS06120 05b9a9e467ce6c3af01402dfd47d0375 445 Pfam PF02689 Helicase 372 416 4.8E-5 T 22-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 PNUC_RS06120 05b9a9e467ce6c3af01402dfd47d0375 445 Gene3D G3DSA:3.40.50.300 11 141 4.9E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06120 05b9a9e467ce6c3af01402dfd47d0375 445 SUPERFAMILY SSF52540 135 336 1.59E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06120 05b9a9e467ce6c3af01402dfd47d0375 445 SUPERFAMILY SSF52540 363 437 1.59E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06120 05b9a9e467ce6c3af01402dfd47d0375 445 PANTHER PTHR23274 1 435 1.1E-102 T 22-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 PNUC_RS06120 05b9a9e467ce6c3af01402dfd47d0375 445 SUPERFAMILY SSF52540 11 154 1.4E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06120 05b9a9e467ce6c3af01402dfd47d0375 445 Pfam PF05970 PIF1-like helicase 17 161 1.6E-29 T 22-04-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 PNUC_RS06120 05b9a9e467ce6c3af01402dfd47d0375 445 Gene3D G3DSA:3.40.50.300 359 414 9.5E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06120 05b9a9e467ce6c3af01402dfd47d0375 445 Gene3D G3DSA:3.40.50.300 142 258 9.5E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03095 8535dc38de13e240388ef9aea0c8b421 313 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 305 2.0E-45 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 PNUC_RS03095 8535dc38de13e240388ef9aea0c8b421 313 Pfam PF03812 2-keto-3-deoxygluconate permease 3 304 9.5E-106 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 PNUC_RS10705 cde721de04c94c5143f39b95f152de13 424 Pfam PF00589 Phage integrase family 220 414 3.7E-8 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS10705 cde721de04c94c5143f39b95f152de13 424 PANTHER PTHR30349 139 314 7.9E-12 T 22-04-2016 PNUC_RS10705 cde721de04c94c5143f39b95f152de13 424 PANTHER PTHR30349:SF5 139 314 7.9E-12 T 22-04-2016 PNUC_RS10705 cde721de04c94c5143f39b95f152de13 424 PANTHER PTHR30349:SF5 336 423 7.9E-12 T 22-04-2016 PNUC_RS10705 cde721de04c94c5143f39b95f152de13 424 PANTHER PTHR30349 336 423 7.9E-12 T 22-04-2016 PNUC_RS10705 cde721de04c94c5143f39b95f152de13 424 SUPERFAMILY SSF56349 105 418 4.71E-30 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PNUC_RS10705 cde721de04c94c5143f39b95f152de13 424 Gene3D G3DSA:1.10.443.10 219 420 2.2E-19 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS04600 7119ad16290778e5c96fbc15a5f10f75 582 SUPERFAMILY SSF143975 22 384 1.7E-115 T 22-04-2016 PNUC_RS04600 7119ad16290778e5c96fbc15a5f10f75 582 PANTHER PTHR21000:SF14 34 572 6.7E-252 T 22-04-2016 PNUC_RS04600 7119ad16290778e5c96fbc15a5f10f75 582 PANTHER PTHR21000 34 572 6.7E-252 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS04600 7119ad16290778e5c96fbc15a5f10f75 582 SUPERFAMILY SSF52016 386 571 6.91E-53 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PNUC_RS04600 7119ad16290778e5c96fbc15a5f10f75 582 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 132 142 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS04600 7119ad16290778e5c96fbc15a5f10f75 582 Pfam PF00920 Dehydratase family 49 564 1.1E-170 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PNUC_RS08410 67c515b157be2b96aeff03dc6fce6139 484 PANTHER PTHR30365:SF8 1 470 3.6E-230 T 22-04-2016 PNUC_RS08410 67c515b157be2b96aeff03dc6fce6139 484 PIRSF PIRSF006446 2 471 1.8E-176 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PNUC_RS08410 67c515b157be2b96aeff03dc6fce6139 484 PANTHER PTHR30365 1 470 3.6E-230 T 22-04-2016 PNUC_RS08410 67c515b157be2b96aeff03dc6fce6139 484 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 451 4.2E-156 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 Gene3D G3DSA:2.70.150.10 168 320 7.0E-26 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PANTHER PTHR24093:SF317 27 718 4.1E-247 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 168 725 1.7E-140 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PANTHER PTHR24093 27 718 4.1E-247 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 SUPERFAMILY SSF56784 418 438 3.25E-54 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 SUPERFAMILY SSF56784 476 720 3.25E-54 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 SUPERFAMILY SSF81653 221 319 2.62E-23 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 191 704 2.3E-80 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 Gene3D G3DSA:3.40.50.1000 393 434 5.2E-43 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 Gene3D G3DSA:3.40.50.1000 546 689 5.2E-43 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PRINTS PR00941 Cadmium-transporting ATPase signature 203 223 8.3E-14 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PRINTS PR00941 Cadmium-transporting ATPase signature 285 301 8.3E-14 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PRINTS PR00941 Cadmium-transporting ATPase signature 149 161 8.3E-14 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PRINTS PR00941 Cadmium-transporting ATPase signature 304 318 8.3E-14 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PRINTS PR00941 Cadmium-transporting ATPase signature 30 39 8.3E-14 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 Pfam PF00122 E1-E2 ATPase 189 411 6.3E-64 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 565 575 7.1E-24 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 420 434 7.1E-24 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 543 554 7.1E-24 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 656 7.1E-24 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 620 639 7.1E-24 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 269 283 7.1E-24 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 Gene3D G3DSA:3.30.70.100 26 93 2.7E-8 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 422 428 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 168 723 9.6E-172 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 SUPERFAMILY SSF55008 24 93 3.01E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 Pfam PF00702 haloacid dehalogenase-like hydrolase 416 633 1.0E-35 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 Gene3D G3DSA:3.40.1110.10 435 545 2.7E-17 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 Pfam PF00403 Heavy-metal-associated domain 30 74 3.8E-5 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 SUPERFAMILY SSF81665 320 412 2.88E-15 T 22-04-2016 PNUC_RS08725 e4b579fe5e8cb292861a318bc6955896 726 SUPERFAMILY SSF81665 168 222 2.88E-15 T 22-04-2016 PNUC_RS09650 c5f2cea224ceef675c96e12b7fa29c72 155 SUPERFAMILY SSF55486 29 153 2.15E-36 T 22-04-2016 PNUC_RS09650 c5f2cea224ceef675c96e12b7fa29c72 155 PANTHER PTHR22881 18 152 2.4E-29 T 22-04-2016 PNUC_RS09650 c5f2cea224ceef675c96e12b7fa29c72 155 Pfam PF02130 Uncharacterized protein family UPF0054 25 145 2.9E-30 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PNUC_RS09650 c5f2cea224ceef675c96e12b7fa29c72 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 8 149 19.729 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PNUC_RS09650 c5f2cea224ceef675c96e12b7fa29c72 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 45 146 2.8E-30 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PNUC_RS09650 c5f2cea224ceef675c96e12b7fa29c72 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 115 125 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site PNUC_RS09650 c5f2cea224ceef675c96e12b7fa29c72 155 Gene3D G3DSA:3.40.390.30 27 153 7.5E-40 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 PNUC_RS03260 5a1b7d793ad5316ff3242cbcf5c95e56 155 Gene3D G3DSA:3.40.50.10110 1 151 4.5E-29 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PNUC_RS03260 5a1b7d793ad5316ff3242cbcf5c95e56 155 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 147 2.8E-33 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PNUC_RS03260 5a1b7d793ad5316ff3242cbcf5c95e56 155 PANTHER PTHR38767 1 154 8.8E-14 T 22-04-2016 PNUC_RS03260 5a1b7d793ad5316ff3242cbcf5c95e56 155 SUPERFAMILY SSF102400 1 151 9.29E-29 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PNUC_RS09295 e981d3a7ec5d3a44d28ea03e17e80a9d 108 PANTHER PTHR33909 1 108 3.8E-29 T 22-04-2016 PNUC_RS09295 e981d3a7ec5d3a44d28ea03e17e80a9d 108 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 100 9.6E-28 T 22-04-2016 IPR003849 Preprotein translocase YajC PNUC_RS09295 e981d3a7ec5d3a44d28ea03e17e80a9d 108 PANTHER PTHR33909:SF1 1 108 3.8E-29 T 22-04-2016 PNUC_RS09295 e981d3a7ec5d3a44d28ea03e17e80a9d 108 Pfam PF02699 Preprotein translocase subunit 21 97 8.5E-30 T 22-04-2016 IPR003849 Preprotein translocase YajC PNUC_RS09295 e981d3a7ec5d3a44d28ea03e17e80a9d 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 9.6E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC PNUC_RS09295 e981d3a7ec5d3a44d28ea03e17e80a9d 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 9.6E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC PNUC_RS09295 e981d3a7ec5d3a44d28ea03e17e80a9d 108 SMART SM01323 18 100 3.2E-43 T 22-04-2016 IPR003849 Preprotein translocase YajC PNUC_RS01865 a63c8a43ec130088f7180f0f46bd3c78 394 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 47 63 9.0E-10 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PNUC_RS01865 a63c8a43ec130088f7180f0f46bd3c78 394 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 25 41 9.0E-10 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PNUC_RS01865 a63c8a43ec130088f7180f0f46bd3c78 394 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 66 84 9.0E-10 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PNUC_RS01865 a63c8a43ec130088f7180f0f46bd3c78 394 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 283 296 9.0E-10 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PNUC_RS01865 a63c8a43ec130088f7180f0f46bd3c78 394 Pfam PF13458 Periplasmic binding protein 25 368 2.7E-71 T 22-04-2016 IPR028081 Leucine-binding protein domain PNUC_RS01865 a63c8a43ec130088f7180f0f46bd3c78 394 PANTHER PTHR30483 7 380 8.0E-66 T 22-04-2016 PNUC_RS01865 a63c8a43ec130088f7180f0f46bd3c78 394 SUPERFAMILY SSF53822 25 384 3.7E-87 T 22-04-2016 IPR028082 Periplasmic binding protein-like I PNUC_RS01865 a63c8a43ec130088f7180f0f46bd3c78 394 Gene3D G3DSA:3.40.50.2300 24 225 4.6E-58 T 22-04-2016 PNUC_RS02895 728b59233d15319a37eda46859d75393 145 PANTHER PTHR33452 2 140 3.3E-18 T 22-04-2016 PNUC_RS02895 728b59233d15319a37eda46859d75393 145 Pfam PF07681 DoxX 12 101 4.4E-16 T 22-04-2016 IPR032808 DoxX family PNUC_RS02895 728b59233d15319a37eda46859d75393 145 PANTHER PTHR33452:SF6 2 140 3.3E-18 T 22-04-2016 PNUC_RS03575 5a4f137a623851fe6e3f1ff108c8d225 178 SUPERFAMILY SSF50324 4 175 1.7E-66 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PNUC_RS03575 5a4f137a623851fe6e3f1ff108c8d225 178 Gene3D G3DSA:3.90.80.10 4 175 7.3E-60 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PNUC_RS03575 5a4f137a623851fe6e3f1ff108c8d225 178 PANTHER PTHR10286 9 175 3.8E-66 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PNUC_RS03575 5a4f137a623851fe6e3f1ff108c8d225 178 Pfam PF00719 Inorganic pyrophosphatase 18 174 8.8E-51 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PNUC_RS03575 5a4f137a623851fe6e3f1ff108c8d225 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PNUC_RS03575 5a4f137a623851fe6e3f1ff108c8d225 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.508 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PNUC_RS03425 70f409d95d7d372bf89e406b1f0bf9cf 274 PANTHER PTHR38042:SF1 1 272 6.0E-23 T 22-04-2016 PNUC_RS03425 70f409d95d7d372bf89e406b1f0bf9cf 274 Gene3D G3DSA:3.40.50.10090 150 267 1.7E-8 T 22-04-2016 PNUC_RS03425 70f409d95d7d372bf89e406b1f0bf9cf 274 Pfam PF02602 Uroporphyrinogen-III synthase HemD 38 265 3.3E-23 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03425 70f409d95d7d372bf89e406b1f0bf9cf 274 SUPERFAMILY SSF69618 4 266 3.92E-35 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PNUC_RS03425 70f409d95d7d372bf89e406b1f0bf9cf 274 Gene3D G3DSA:3.40.50.10090 38 115 8.3E-9 T 22-04-2016 PNUC_RS03425 70f409d95d7d372bf89e406b1f0bf9cf 274 PANTHER PTHR38042 1 272 6.0E-23 T 22-04-2016 PNUC_RS05180 ef86d3868e95e5749895117a56157a4b 397 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 45 369 5.5E-49 T 22-04-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal PNUC_RS05180 ef86d3868e95e5749895117a56157a4b 397 PANTHER PTHR35527 14 386 9.6E-78 T 22-04-2016 PNUC_RS05180 ef86d3868e95e5749895117a56157a4b 397 SUPERFAMILY SSF56235 45 372 4.63E-69 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS05180 ef86d3868e95e5749895117a56157a4b 397 PANTHER PTHR35527:SF1 14 386 9.6E-78 T 22-04-2016 PNUC_RS05180 ef86d3868e95e5749895117a56157a4b 397 Gene3D G3DSA:3.60.60.10 45 376 4.9E-82 T 22-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 PNUC_RS10135 53bda461b2253e9101e294b4ffa75c70 494 PANTHER PTHR11730:SF17 38 212 2.0E-185 T 22-04-2016 PNUC_RS10135 53bda461b2253e9101e294b4ffa75c70 494 PANTHER PTHR11730:SF17 231 493 2.0E-185 T 22-04-2016 PNUC_RS10135 53bda461b2253e9101e294b4ffa75c70 494 TIGRFAM TIGR00836 amt: ammonium transporter 64 492 1.1E-135 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PNUC_RS10135 53bda461b2253e9101e294b4ffa75c70 494 ProSitePatterns PS01219 Ammonium transporters signature. 240 265 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 PNUC_RS10135 53bda461b2253e9101e294b4ffa75c70 494 SUPERFAMILY SSF111352 60 473 3.4E-127 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PNUC_RS10135 53bda461b2253e9101e294b4ffa75c70 494 Pfam PF00909 Ammonium Transporter Family 66 492 6.5E-121 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PNUC_RS10135 53bda461b2253e9101e294b4ffa75c70 494 Gene3D G3DSA:1.10.3430.10 58 473 5.0E-143 T 22-04-2016 IPR029020 Ammonium/urea transporter PNUC_RS10135 53bda461b2253e9101e294b4ffa75c70 494 PANTHER PTHR11730 38 212 2.0E-185 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PNUC_RS10135 53bda461b2253e9101e294b4ffa75c70 494 PANTHER PTHR11730 231 493 2.0E-185 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PNUC_RS10210 fd204290abf4236ebf54b467392e3730 462 PANTHER PTHR10742 3 449 1.1E-143 T 22-04-2016 PNUC_RS10210 fd204290abf4236ebf54b467392e3730 462 Gene3D G3DSA:3.50.50.60 223 351 3.3E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS10210 fd204290abf4236ebf54b467392e3730 462 Gene3D G3DSA:3.50.50.60 2 126 3.3E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS10210 fd204290abf4236ebf54b467392e3730 462 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 82 5.4E-16 T 22-04-2016 PNUC_RS10210 fd204290abf4236ebf54b467392e3730 462 SUPERFAMILY SSF51905 414 446 7.77E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS10210 fd204290abf4236ebf54b467392e3730 462 SUPERFAMILY SSF51905 4 327 7.77E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS10210 fd204290abf4236ebf54b467392e3730 462 PANTHER PTHR10742:SF299 3 449 1.1E-143 T 22-04-2016 PNUC_RS09475 1ae3e2f0b2ddab27acce261ddc6abdb4 324 Pfam PF13692 Glycosyl transferases group 1 158 260 9.3E-7 T 22-04-2016 PNUC_RS09475 1ae3e2f0b2ddab27acce261ddc6abdb4 324 SUPERFAMILY SSF53756 4 320 2.83E-24 T 22-04-2016 PNUC_RS09475 1ae3e2f0b2ddab27acce261ddc6abdb4 324 Pfam PF16994 Glycosyl-transferase family 4 2 142 3.9E-20 T 22-04-2016 PNUC_RS09475 1ae3e2f0b2ddab27acce261ddc6abdb4 324 Gene3D G3DSA:3.40.50.2000 122 301 1.1E-4 T 22-04-2016 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 SUPERFAMILY SSF50621 231 363 6.63E-43 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 Pfam PF01168 Alanine racemase, N-terminal domain 9 220 1.9E-57 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 Gene3D G3DSA:3.20.20.10 12 213 5.2E-54 T 22-04-2016 IPR029066 PLP-binding barrel PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 TIGRFAM TIGR00492 alr: alanine racemase 4 363 1.3E-98 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 Hamap MF_01201 Alanine racemase. 2 366 30.635 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 SMART SM01005 235 366 1.2E-63 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 PANTHER PTHR30511:SF4 3 361 1.0E-112 T 22-04-2016 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 SUPERFAMILY SSF51419 9 236 9.42E-54 T 22-04-2016 IPR029066 PLP-binding barrel PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 Gene3D G3DSA:2.40.37.10 214 363 4.4E-52 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 PANTHER PTHR30511 3 361 1.0E-112 T 22-04-2016 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 Pfam PF00842 Alanine racemase, C-terminal domain 235 363 4.5E-38 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 PRINTS PR00992 Alanine racemase signature 61 79 1.7E-52 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 PRINTS PR00992 Alanine racemase signature 193 220 1.7E-52 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 PRINTS PR00992 Alanine racemase signature 155 166 1.7E-52 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 PRINTS PR00992 Alanine racemase signature 251 266 1.7E-52 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 PRINTS PR00992 Alanine racemase signature 123 135 1.7E-52 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 PRINTS PR00992 Alanine racemase signature 348 361 1.7E-52 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 PRINTS PR00992 Alanine racemase signature 27 43 1.7E-52 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS04785 ca4eb2675fc4061ce790bad2e4570275 366 PRINTS PR00992 Alanine racemase signature 268 283 1.7E-52 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS03950 302fbb5be203d29d180e30e5665e2634 240 Pfam PF07702 UTRA domain 96 231 6.0E-31 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PNUC_RS03950 302fbb5be203d29d180e30e5665e2634 240 SMART SM00345 13 72 1.8E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS03950 302fbb5be203d29d180e30e5665e2634 240 Gene3D G3DSA:3.40.1410.10 70 239 7.0E-43 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PNUC_RS03950 302fbb5be203d29d180e30e5665e2634 240 Gene3D G3DSA:1.10.10.10 6 69 4.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03950 302fbb5be203d29d180e30e5665e2634 240 SUPERFAMILY SSF46785 6 84 1.78E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03950 302fbb5be203d29d180e30e5665e2634 240 SMART SM00866 92 234 9.6E-31 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PNUC_RS03950 302fbb5be203d29d180e30e5665e2634 240 SUPERFAMILY SSF64288 61 237 5.97E-37 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PNUC_RS03950 302fbb5be203d29d180e30e5665e2634 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 3.3E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS03950 302fbb5be203d29d180e30e5665e2634 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.3E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS03950 302fbb5be203d29d180e30e5665e2634 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.3E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PNUC_RS03950 302fbb5be203d29d180e30e5665e2634 240 PANTHER PTHR11751 120 144 2.1E-21 T 22-04-2016 PNUC_RS03950 302fbb5be203d29d180e30e5665e2634 240 PANTHER PTHR11751 5 74 2.1E-21 T 22-04-2016 PNUC_RS03200 9b2a41ed050360766d18af30aa8f9630 147 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 146 27.955 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS03200 9b2a41ed050360766d18af30aa8f9630 147 Pfam PF02590 Predicted SPOUT methyltransferase 1 145 6.1E-48 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS03200 9b2a41ed050360766d18af30aa8f9630 147 PANTHER PTHR33603:SF1 1 146 1.3E-52 T 22-04-2016 PNUC_RS03200 9b2a41ed050360766d18af30aa8f9630 147 PIRSF PIRSF004505 1 146 9.0E-43 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS03200 9b2a41ed050360766d18af30aa8f9630 147 Gene3D G3DSA:3.40.1280.10 1 146 2.2E-52 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PNUC_RS03200 9b2a41ed050360766d18af30aa8f9630 147 PANTHER PTHR33603 1 146 1.3E-52 T 22-04-2016 PNUC_RS03200 9b2a41ed050360766d18af30aa8f9630 147 SUPERFAMILY SSF75217 1 145 5.76E-46 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PNUC_RS00250 4cd40a0ce4bb3e2d79f2728cc7da70fc 125 Gene3D G3DSA:1.20.5.1030 63 120 2.9E-24 T 22-04-2016 PNUC_RS00250 4cd40a0ce4bb3e2d79f2728cc7da70fc 125 PANTHER PTHR33910:SF1 19 125 7.3E-16 T 22-04-2016 PNUC_RS00250 4cd40a0ce4bb3e2d79f2728cc7da70fc 125 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 67 120 4.9E-18 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PNUC_RS00250 4cd40a0ce4bb3e2d79f2728cc7da70fc 125 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 68 117 6.1E-19 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 PNUC_RS00250 4cd40a0ce4bb3e2d79f2728cc7da70fc 125 PANTHER PTHR33910 19 125 7.3E-16 T 22-04-2016 PNUC_RS00250 4cd40a0ce4bb3e2d79f2728cc7da70fc 125 PRINTS PR01650 Bacterial translocase SecE signature 87 107 2.5E-12 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PNUC_RS00250 4cd40a0ce4bb3e2d79f2728cc7da70fc 125 PRINTS PR01650 Bacterial translocase SecE signature 63 83 2.5E-12 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PNUC_RS00250 4cd40a0ce4bb3e2d79f2728cc7da70fc 125 PRINTS PR01650 Bacterial translocase SecE signature 42 63 2.5E-12 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PNUC_RS00250 4cd40a0ce4bb3e2d79f2728cc7da70fc 125 Hamap MF_00422 Protein translocase subunit SecE [secE]. 64 119 11.106 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE PNUC_RS09050 964bdd445ffa188c6b0903fd8405fe61 162 PANTHER PTHR33695:SF1 9 148 1.6E-51 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PNUC_RS09050 964bdd445ffa188c6b0903fd8405fe61 162 TIGRFAM TIGR00077 lspA: signal peptidase II 10 156 2.8E-38 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PNUC_RS09050 964bdd445ffa188c6b0903fd8405fe61 162 Pfam PF01252 Signal peptidase (SPase) II 12 148 2.9E-37 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PNUC_RS09050 964bdd445ffa188c6b0903fd8405fe61 162 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 3 157 16.487 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PNUC_RS09050 964bdd445ffa188c6b0903fd8405fe61 162 ProSitePatterns PS00855 Signal peptidases II signature. 99 111 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PNUC_RS09050 964bdd445ffa188c6b0903fd8405fe61 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 132 148 8.3E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PNUC_RS09050 964bdd445ffa188c6b0903fd8405fe61 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 96 111 8.3E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PNUC_RS09050 964bdd445ffa188c6b0903fd8405fe61 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 49 57 8.3E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PNUC_RS09050 964bdd445ffa188c6b0903fd8405fe61 162 PANTHER PTHR33695 9 148 1.6E-51 T 22-04-2016 PNUC_RS00420 4f7c4cfd1593ffedc56c9bcb63f0efb8 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.0E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 PNUC_RS00420 4f7c4cfd1593ffedc56c9bcb63f0efb8 72 PANTHER PTHR33370 1 72 1.1E-46 T 22-04-2016 PNUC_RS00420 4f7c4cfd1593ffedc56c9bcb63f0efb8 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.8E-36 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PNUC_RS00420 4f7c4cfd1593ffedc56c9bcb63f0efb8 72 SUPERFAMILY SSF50249 1 70 1.63E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS00420 4f7c4cfd1593ffedc56c9bcb63f0efb8 72 Gene3D G3DSA:2.40.50.140 1 72 5.0E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS00420 4f7c4cfd1593ffedc56c9bcb63f0efb8 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.44 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PNUC_RS00030 99b7d51c77922d1f5d9201f5dbda86a6 255 Pfam PF00005 ABC transporter 24 179 5.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS00030 99b7d51c77922d1f5d9201f5dbda86a6 255 Gene3D G3DSA:3.40.50.300 5 246 2.8E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00030 99b7d51c77922d1f5d9201f5dbda86a6 255 SUPERFAMILY SSF52540 7 248 3.77E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00030 99b7d51c77922d1f5d9201f5dbda86a6 255 SMART SM00382 32 226 4.0E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS00030 99b7d51c77922d1f5d9201f5dbda86a6 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 248 2.0E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PNUC_RS00030 99b7d51c77922d1f5d9201f5dbda86a6 255 PANTHER PTHR24220:SF400 9 249 8.7E-114 T 22-04-2016 PNUC_RS00030 99b7d51c77922d1f5d9201f5dbda86a6 255 PANTHER PTHR24220 9 249 8.7E-114 T 22-04-2016 PNUC_RS09505 3b35e76d45c064506a49ffc29373015c 172 Gene3D G3DSA:1.10.10.10 14 76 5.9E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS09505 3b35e76d45c064506a49ffc29373015c 172 Hamap MF_01114 Regulatory protein RecX [recX]. 6 172 12.779 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 PNUC_RS09505 3b35e76d45c064506a49ffc29373015c 172 Gene3D G3DSA:1.10.10.10 77 110 3.2E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS09505 3b35e76d45c064506a49ffc29373015c 172 Gene3D G3DSA:1.10.10.10 124 168 2.8E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS09505 3b35e76d45c064506a49ffc29373015c 172 PANTHER PTHR33602:SF1 15 37 9.2E-21 T 22-04-2016 PNUC_RS09505 3b35e76d45c064506a49ffc29373015c 172 PANTHER PTHR33602:SF1 54 166 9.2E-21 T 22-04-2016 PNUC_RS09505 3b35e76d45c064506a49ffc29373015c 172 Pfam PF02631 RecX family 59 167 4.5E-28 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 PNUC_RS09505 3b35e76d45c064506a49ffc29373015c 172 PANTHER PTHR33602 15 37 9.2E-21 T 22-04-2016 PNUC_RS09505 3b35e76d45c064506a49ffc29373015c 172 PANTHER PTHR33602 54 166 9.2E-21 T 22-04-2016 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 PANTHER PTHR23135:SF4 10 509 4.0E-166 T 22-04-2016 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 509 1.0E-147 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 PANTHER PTHR23135 10 509 4.0E-166 T 22-04-2016 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 SUPERFAMILY SSF63418 24 104 4.32E-12 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 Pfam PF01225 Mur ligase family, catalytic domain 26 84 4.7E-5 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 Pfam PF08245 Mur ligase middle domain 115 330 1.2E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 Gene3D G3DSA:3.90.190.20 355 506 7.4E-53 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 SUPERFAMILY SSF53244 351 509 2.59E-45 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 SUPERFAMILY SSF53623 106 349 7.85E-71 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 Gene3D G3DSA:3.40.1390.10 24 104 2.9E-14 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 Gene3D G3DSA:3.40.1190.10 106 354 1.8E-74 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 Pfam PF02875 Mur ligase family, glutamate ligase domain 351 445 1.1E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS00880 5ea496089af417009c3c2843d1148e0e 516 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 7 512 32.451 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 PNUC_RS04260 28808c7b4f7bc9397ef723ceb66d19b2 236 PANTHER PTHR34300 49 233 5.1E-51 T 22-04-2016 PNUC_RS04260 28808c7b4f7bc9397ef723ceb66d19b2 236 Pfam PF02592 Putative vitamin uptake transporter 48 210 5.5E-48 T 22-04-2016 IPR003744 Protein of unknown function DUF165 PNUC_RS04260 28808c7b4f7bc9397ef723ceb66d19b2 236 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 14 216 5.4E-31 T 22-04-2016 IPR003744 Protein of unknown function DUF165 PNUC_RS04260 28808c7b4f7bc9397ef723ceb66d19b2 236 PANTHER PTHR34300:SF2 49 233 5.1E-51 T 22-04-2016 PNUC_RS01285 27d9a88ee5742333bad5d2cfad767d08 272 PANTHER PTHR30336 3 270 1.8E-28 T 22-04-2016 PNUC_RS01285 27d9a88ee5742333bad5d2cfad767d08 272 PANTHER PTHR30336:SF1 3 270 1.8E-28 T 22-04-2016 PNUC_RS01285 27d9a88ee5742333bad5d2cfad767d08 272 Gene3D G3DSA:3.40.50.620 88 233 1.2E-19 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS01285 27d9a88ee5742333bad5d2cfad767d08 272 Pfam PF02698 DUF218 domain 88 262 7.0E-25 T 22-04-2016 IPR003848 Domain of unknown function DUF218 PNUC_RS04945 c95b853099247af863fe3ae662eddba3 321 SUPERFAMILY SSF64397 2 258 1.7E-50 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 PNUC_RS04945 c95b853099247af863fe3ae662eddba3 321 Gene3D G3DSA:3.55.30.10 3 188 9.0E-49 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 PNUC_RS04945 c95b853099247af863fe3ae662eddba3 321 PANTHER PTHR30111 1 312 1.3E-44 T 22-04-2016 PNUC_RS04945 c95b853099247af863fe3ae662eddba3 321 Gene3D G3DSA:1.10.287.480 199 237 7.6E-11 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain PNUC_RS04945 c95b853099247af863fe3ae662eddba3 321 PIRSF PIRSF005261 1 309 6.8E-62 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PNUC_RS04945 c95b853099247af863fe3ae662eddba3 321 PANTHER PTHR30111:SF1 1 312 1.3E-44 T 22-04-2016 PNUC_RS04945 c95b853099247af863fe3ae662eddba3 321 SUPERFAMILY SSF118352 249 306 1.7E-17 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 PNUC_RS04945 c95b853099247af863fe3ae662eddba3 321 Gene3D G3DSA:3.90.1280.10 249 306 8.8E-22 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 PNUC_RS04945 c95b853099247af863fe3ae662eddba3 321 Pfam PF01430 Hsp33 protein 3 297 6.6E-73 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PNUC_RS10375 4e4842b01010034f650911c926d20b98 299 PANTHER PTHR30606 10 299 2.3E-70 T 22-04-2016 PNUC_RS10375 4e4842b01010034f650911c926d20b98 299 PIRSF PIRSF026649 3 298 1.5E-65 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PNUC_RS10375 4e4842b01010034f650911c926d20b98 299 PANTHER PTHR30606:SF5 10 299 2.3E-70 T 22-04-2016 PNUC_RS10375 4e4842b01010034f650911c926d20b98 299 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 288 2.0E-54 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PNUC_RS08185 046e8513d94d6607ceb8c453a25bf70f 209 SUPERFAMILY SSF159594 22 198 9.68E-28 T 22-04-2016 PNUC_RS08185 046e8513d94d6607ceb8c453a25bf70f 209 Gene3D G3DSA:3.40.50.10610 16 198 1.4E-16 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PNUC_RS08185 046e8513d94d6607ceb8c453a25bf70f 209 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 25 197 3.3E-33 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 Pfam PF01556 DnaJ C terminal domain 145 298 5.6E-32 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 SUPERFAMILY SSF49493 226 308 1.83E-18 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 Gene3D G3DSA:1.10.287.110 1 121 1.3E-32 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 SUPERFAMILY SSF49493 138 230 2.22E-14 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 Gene3D G3DSA:2.60.260.20 131 219 1.8E-17 T 22-04-2016 PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 PANTHER PTHR24078 85 314 1.6E-70 T 22-04-2016 PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 PANTHER PTHR24078 4 69 1.6E-70 T 22-04-2016 PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 Gene3D G3DSA:2.60.260.20 224 298 8.2E-17 T 22-04-2016 PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 Pfam PF00226 DnaJ domain 5 66 1.5E-25 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 SUPERFAMILY SSF46565 1 104 1.44E-32 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 PANTHER PTHR24078:SF231 85 314 1.6E-70 T 22-04-2016 PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 PANTHER PTHR24078:SF231 4 69 1.6E-70 T 22-04-2016 PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 PRINTS PR00625 DnaJ domain signature 7 25 7.52E-25 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 PRINTS PR00625 DnaJ domain signature 61 80 7.52E-25 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 PRINTS PR00625 DnaJ domain signature 25 40 7.52E-25 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 PRINTS PR00625 DnaJ domain signature 41 61 7.52E-25 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 22-04-2016 IPR018253 DnaJ domain, conserved site PNUC_RS03780 5a30cc9cd4313c9b8bf214e1d7f5d28f 326 SMART SM00271 4 61 7.6E-29 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS06610 cc2d22c65cac1fdcfa8ad92fc13030d3 345 PANTHER PTHR13833:SF51 49 232 2.5E-15 T 22-04-2016 PNUC_RS06610 cc2d22c65cac1fdcfa8ad92fc13030d3 345 PANTHER PTHR13833 49 232 2.5E-15 T 22-04-2016 PNUC_RS06610 cc2d22c65cac1fdcfa8ad92fc13030d3 345 SUPERFAMILY SSF50974 38 340 9.42E-69 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal PNUC_RS06610 cc2d22c65cac1fdcfa8ad92fc13030d3 345 Pfam PF02239 Cytochrome D1 heme domain 209 340 1.5E-7 T 22-04-2016 PNUC_RS06610 cc2d22c65cac1fdcfa8ad92fc13030d3 345 Gene3D G3DSA:2.130.10.10 271 341 6.8E-13 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PNUC_RS06610 cc2d22c65cac1fdcfa8ad92fc13030d3 345 Gene3D G3DSA:2.130.10.10 38 270 7.1E-41 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PNUC_RS00455 ffe795bb77621f386d8bf5780014dda8 116 Gene3D G3DSA:3.30.70.830 11 114 3.2E-36 T 22-04-2016 PNUC_RS00455 ffe795bb77621f386d8bf5780014dda8 116 Pfam PF03091 CutA1 divalent ion tolerance protein 14 110 2.6E-31 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 PNUC_RS00455 ffe795bb77621f386d8bf5780014dda8 116 PANTHER PTHR23419 12 112 1.1E-26 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 PNUC_RS00455 ffe795bb77621f386d8bf5780014dda8 116 SUPERFAMILY SSF54913 11 113 2.71E-33 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PNUC_RS09395 9837d759e5e8c0a174c80a8272a78a83 513 PANTHER PTHR30023 1 509 1.6E-55 T 22-04-2016 PNUC_RS09395 9837d759e5e8c0a174c80a8272a78a83 513 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 74 484 5.3E-53 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PNUC_RS09395 9837d759e5e8c0a174c80a8272a78a83 513 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 72 501 1.7E-70 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PNUC_RS09395 9837d759e5e8c0a174c80a8272a78a83 513 PANTHER PTHR30023:SF0 1 509 1.6E-55 T 22-04-2016 PNUC_RS09395 9837d759e5e8c0a174c80a8272a78a83 513 SUPERFAMILY SSF56601 36 504 2.55E-77 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS09395 9837d759e5e8c0a174c80a8272a78a83 513 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 462 475 3.2E-20 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PNUC_RS09395 9837d759e5e8c0a174c80a8272a78a83 513 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 320 342 3.2E-20 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PNUC_RS09395 9837d759e5e8c0a174c80a8272a78a83 513 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 393 407 3.2E-20 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PNUC_RS09395 9837d759e5e8c0a174c80a8272a78a83 513 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 84 103 3.2E-20 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PNUC_RS09395 9837d759e5e8c0a174c80a8272a78a83 513 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 378 392 3.2E-20 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PNUC_RS09395 9837d759e5e8c0a174c80a8272a78a83 513 Gene3D G3DSA:3.40.710.10 262 504 6.9E-53 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 PANTHER PTHR30265 17 190 8.9E-75 T 22-04-2016 PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 15 190 25.359 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 Pfam PF00467 KOW motif 139 172 5.4E-6 T 22-04-2016 IPR005824 KOW PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 SMART SM00739 136 163 3.5E-5 T 22-04-2016 IPR005824 KOW PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 Gene3D G3DSA:3.30.70.940 16 126 1.3E-44 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 SMART SM00738 15 124 8.4E-44 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 ProSitePatterns PS01014 Transcription termination factor nusG signature. 173 182 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 SUPERFAMILY SSF82679 16 125 1.31E-37 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 SUPERFAMILY SSF50104 134 189 1.88E-18 T 22-04-2016 IPR008991 Translation protein SH3-like domain PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 PRINTS PR00338 Transcription termination factor NUSG signature 148 163 3.1E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 PRINTS PR00338 Transcription termination factor NUSG signature 166 182 3.1E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 PRINTS PR00338 Transcription termination factor NUSG signature 70 82 3.1E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 Gene3D G3DSA:2.30.30.30 129 190 3.6E-29 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 Pfam PF02357 Transcription termination factor nusG 16 121 6.3E-26 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 PNUC_RS00255 e8df83f4ccf6447b88ce68cbe678dddd 190 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 18 190 7.5E-68 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PNUC_RS08340 3149b498b9e184ce860c728b73651945 288 SUPERFAMILY SSF161098 34 278 2.06E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS08340 3149b498b9e184ce860c728b73651945 288 PANTHER PTHR30425:SF0 11 285 4.6E-113 T 22-04-2016 PNUC_RS08340 3149b498b9e184ce860c728b73651945 288 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 20 284 1.6E-83 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 PNUC_RS08340 3149b498b9e184ce860c728b73651945 288 PANTHER PTHR30425 11 285 4.6E-113 T 22-04-2016 PNUC_RS08340 3149b498b9e184ce860c728b73651945 288 Gene3D G3DSA:1.10.3720.10 27 285 3.2E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS08340 3149b498b9e184ce860c728b73651945 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 281 8.0E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS10315 13ab02e2c8fd8f1f536cc3f9a49c3497 302 PANTHER PTHR11807:SF16 1 263 1.3E-108 T 22-04-2016 PNUC_RS10315 13ab02e2c8fd8f1f536cc3f9a49c3497 302 Pfam PF01171 PP-loop family 37 198 1.1E-16 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal PNUC_RS10315 13ab02e2c8fd8f1f536cc3f9a49c3497 302 Gene3D G3DSA:3.40.50.620 22 203 4.5E-20 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS10315 13ab02e2c8fd8f1f536cc3f9a49c3497 302 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 6 267 56.019 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 PNUC_RS10315 13ab02e2c8fd8f1f536cc3f9a49c3497 302 SUPERFAMILY SSF52402 24 251 1.26E-56 T 22-04-2016 PNUC_RS10315 13ab02e2c8fd8f1f536cc3f9a49c3497 302 PIRSF PIRSF004976 3 274 6.7E-73 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 PNUC_RS10315 13ab02e2c8fd8f1f536cc3f9a49c3497 302 PANTHER PTHR11807 1 263 1.3E-108 T 22-04-2016 PNUC_RS01485 decd01d70c2eb14cbe16726d2886136b 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 10 245 9.2E-83 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PNUC_RS01485 decd01d70c2eb14cbe16726d2886136b 254 SUPERFAMILY SSF53448 10 251 1.06E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS01485 decd01d70c2eb14cbe16726d2886136b 254 PANTHER PTHR21485:SF4 10 251 8.7E-99 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PNUC_RS01485 decd01d70c2eb14cbe16726d2886136b 254 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 8 252 40.529 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PNUC_RS01485 decd01d70c2eb14cbe16726d2886136b 254 Gene3D G3DSA:3.90.550.10 10 252 6.6E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS01485 decd01d70c2eb14cbe16726d2886136b 254 Pfam PF02348 Cytidylyltransferase 12 225 1.4E-56 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PNUC_RS01485 decd01d70c2eb14cbe16726d2886136b 254 PANTHER PTHR21485 10 251 8.7E-99 T 22-04-2016 PNUC_RS10015 33cf968c81833472cc7448f7b1d75493 376 PANTHER PTHR35457 266 370 4.2E-50 T 22-04-2016 PNUC_RS10015 33cf968c81833472cc7448f7b1d75493 376 PANTHER PTHR35457 91 243 4.2E-50 T 22-04-2016 PNUC_RS10015 33cf968c81833472cc7448f7b1d75493 376 PANTHER PTHR35457 8 75 4.2E-50 T 22-04-2016 PNUC_RS10015 33cf968c81833472cc7448f7b1d75493 376 Pfam PF02628 Cytochrome oxidase assembly protein 36 356 1.4E-78 T 22-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 PNUC_RS10015 33cf968c81833472cc7448f7b1d75493 376 PANTHER PTHR35457:SF1 266 370 4.2E-50 T 22-04-2016 PNUC_RS10015 33cf968c81833472cc7448f7b1d75493 376 PANTHER PTHR35457:SF1 91 243 4.2E-50 T 22-04-2016 PNUC_RS10015 33cf968c81833472cc7448f7b1d75493 376 PANTHER PTHR35457:SF1 8 75 4.2E-50 T 22-04-2016 PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 Gene3D G3DSA:3.40.50.1100 123 215 7.2E-7 T 22-04-2016 PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 Gene3D G3DSA:3.40.50.1100 216 452 1.3E-88 T 22-04-2016 PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 TIGRFAM TIGR00260 thrC: threonine synthase 108 440 3.3E-70 T 22-04-2016 IPR004450 Threonine synthase-like PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 Pfam PF14821 Threonine synthase N terminus 2 79 1.1E-28 T 22-04-2016 IPR029144 Threonine synthase, N-terminal PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 PANTHER PTHR10314:SF1 379 478 7.3E-120 T 22-04-2016 PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 PANTHER PTHR10314:SF1 53 345 7.3E-120 T 22-04-2016 PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 PANTHER PTHR10314:SF1 25 36 7.3E-120 T 22-04-2016 PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 Gene3D G3DSA:3.90.1380.10 1 82 1.4E-31 T 22-04-2016 IPR029144 Threonine synthase, N-terminal PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 340 2.2E-10 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 SUPERFAMILY SSF53686 1 479 6.08E-148 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 114 128 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 PANTHER PTHR10314 379 478 7.3E-120 T 22-04-2016 PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 PANTHER PTHR10314 53 345 7.3E-120 T 22-04-2016 PNUC_RS02305 0e96a99cca4623e92dc943af86f2cd85 480 PANTHER PTHR10314 25 36 7.3E-120 T 22-04-2016 PNUC_RS08985 30125ece6c6c84dabd57b4b17989c188 363 PANTHER PTHR30482 11 356 3.2E-106 T 22-04-2016 PNUC_RS08985 30125ece6c6c84dabd57b4b17989c188 363 PANTHER PTHR30482:SF10 11 356 3.2E-106 T 22-04-2016 PNUC_RS08985 30125ece6c6c84dabd57b4b17989c188 363 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 330 7.2E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PNUC_RS10355 75c621331d3dabeb01d6ae9591a2cb41 276 Pfam PF02219 Methylenetetrahydrofolate reductase 3 272 7.9E-81 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 PNUC_RS10355 75c621331d3dabeb01d6ae9591a2cb41 276 SUPERFAMILY SSF51730 3 274 9.02E-90 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like PNUC_RS10355 75c621331d3dabeb01d6ae9591a2cb41 276 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 3 272 3.3E-94 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 PNUC_RS10355 75c621331d3dabeb01d6ae9591a2cb41 276 PANTHER PTHR21091:SF31 131 266 3.0E-31 T 22-04-2016 PNUC_RS10355 75c621331d3dabeb01d6ae9591a2cb41 276 Gene3D G3DSA:3.20.20.220 3 275 7.5E-98 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like PNUC_RS10355 75c621331d3dabeb01d6ae9591a2cb41 276 PANTHER PTHR21091 131 266 3.0E-31 T 22-04-2016 PNUC_RS07710 7b7d72122b084b5a1a9c5fff4dfda1fc 163 SUPERFAMILY SSF103088 50 161 4.84E-29 T 22-04-2016 IPR006665 OmpA-like domain PNUC_RS07710 7b7d72122b084b5a1a9c5fff4dfda1fc 163 PANTHER PTHR30128 56 163 9.5E-42 T 22-04-2016 PNUC_RS07710 7b7d72122b084b5a1a9c5fff4dfda1fc 163 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 57 162 6.9E-39 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 PNUC_RS07710 7b7d72122b084b5a1a9c5fff4dfda1fc 163 PRINTS PR01021 OMPA domain signature 92 107 6.9E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PNUC_RS07710 7b7d72122b084b5a1a9c5fff4dfda1fc 163 PRINTS PR01021 OMPA domain signature 60 82 6.9E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PNUC_RS07710 7b7d72122b084b5a1a9c5fff4dfda1fc 163 PRINTS PR01021 OMPA domain signature 107 123 6.9E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PNUC_RS07710 7b7d72122b084b5a1a9c5fff4dfda1fc 163 PANTHER PTHR30128:SF18 56 163 9.5E-42 T 22-04-2016 PNUC_RS07710 7b7d72122b084b5a1a9c5fff4dfda1fc 163 Pfam PF00691 OmpA family 59 156 1.9E-22 T 22-04-2016 IPR006665 OmpA-like domain PNUC_RS07710 7b7d72122b084b5a1a9c5fff4dfda1fc 163 Gene3D G3DSA:3.30.1330.60 52 161 1.9E-30 T 22-04-2016 IPR006665 OmpA-like domain PNUC_RS02995 46b36ce915c661970cea76b47fd65aba 227 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 214 1.3E-37 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PNUC_RS02995 46b36ce915c661970cea76b47fd65aba 227 PANTHER PTHR33508 1 224 6.8E-44 T 22-04-2016 PNUC_RS02995 46b36ce915c661970cea76b47fd65aba 227 Pfam PF01914 MarC family integral membrane protein 7 217 1.9E-41 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PNUC_RS02995 46b36ce915c661970cea76b47fd65aba 227 PANTHER PTHR33508:SF1 1 224 6.8E-44 T 22-04-2016 PNUC_RS08550 bb6ba16034d869c7fe2fcea998b08757 148 PANTHER PTHR31793 9 144 3.9E-52 T 22-04-2016 PNUC_RS08550 bb6ba16034d869c7fe2fcea998b08757 148 Pfam PF13279 Thioesterase-like superfamily 23 138 2.7E-13 T 22-04-2016 PNUC_RS08550 bb6ba16034d869c7fe2fcea998b08757 148 Gene3D G3DSA:3.10.129.10 5 145 1.0E-47 T 22-04-2016 IPR029069 HotDog domain PNUC_RS08550 bb6ba16034d869c7fe2fcea998b08757 148 PANTHER PTHR31793:SF7 9 144 3.9E-52 T 22-04-2016 PNUC_RS08550 bb6ba16034d869c7fe2fcea998b08757 148 SUPERFAMILY SSF54637 11 144 1.3E-34 T 22-04-2016 IPR029069 HotDog domain PNUC_RS01815 efc3459bcdde97c52b5eba7c00b7e144 236 SMART SM00953 72 206 1.0E-32 T 22-04-2016 IPR014914 RES domain PNUC_RS01815 efc3459bcdde97c52b5eba7c00b7e144 236 Pfam PF08808 RES domain 62 209 1.2E-26 T 22-04-2016 IPR014914 RES domain PNUC_RS00625 8cacf4e26e47062adce36a0a9c460869 133 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 27 115 1.2E-11 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 PNUC_RS00625 8cacf4e26e47062adce36a0a9c460869 133 SUPERFAMILY SSF101386 33 117 3.74E-18 T 22-04-2016 PNUC_RS00625 8cacf4e26e47062adce36a0a9c460869 133 PANTHER PTHR21256 6 130 4.8E-32 T 22-04-2016 PNUC_RS00625 8cacf4e26e47062adce36a0a9c460869 133 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 15 112 8.3E-25 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 PNUC_RS00625 8cacf4e26e47062adce36a0a9c460869 133 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 12 112 18.962 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 PNUC_RS00685 24f6d1cbf1e562dc1f447ef697d0cbe0 466 Pfam PF00033 Cytochrome b/b6/petB 37 225 2.7E-66 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PNUC_RS00685 24f6d1cbf1e562dc1f447ef697d0cbe0 466 PIRSF PIRSF038885 11 466 6.2E-149 T 22-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 PNUC_RS00685 24f6d1cbf1e562dc1f447ef697d0cbe0 466 PANTHER PTHR19271 15 319 3.6E-212 T 22-04-2016 PNUC_RS00685 24f6d1cbf1e562dc1f447ef697d0cbe0 466 PANTHER PTHR19271 366 457 3.6E-212 T 22-04-2016 PNUC_RS00685 24f6d1cbf1e562dc1f447ef697d0cbe0 466 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 291 438 2.6E-42 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 PNUC_RS00685 24f6d1cbf1e562dc1f447ef697d0cbe0 466 SUPERFAMILY SSF81648 363 452 1.7E-22 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 PNUC_RS00685 24f6d1cbf1e562dc1f447ef697d0cbe0 466 SUPERFAMILY SSF81648 294 316 1.7E-22 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 PNUC_RS00685 24f6d1cbf1e562dc1f447ef697d0cbe0 466 Gene3D G3DSA:1.20.810.10 367 457 2.4E-155 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain PNUC_RS00685 24f6d1cbf1e562dc1f447ef697d0cbe0 466 Gene3D G3DSA:1.20.810.10 19 320 2.4E-155 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain PNUC_RS00685 24f6d1cbf1e562dc1f447ef697d0cbe0 466 SUPERFAMILY SSF81342 21 293 2.35E-94 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PNUC_RS00685 24f6d1cbf1e562dc1f447ef697d0cbe0 466 PANTHER PTHR19271:SF9 15 319 3.6E-212 T 22-04-2016 PNUC_RS00685 24f6d1cbf1e562dc1f447ef697d0cbe0 466 PANTHER PTHR19271:SF9 366 457 3.6E-212 T 22-04-2016 PNUC_RS00540 23d8413271b4c77be7391df6b8c4dc12 265 PANTHER PTHR30188:SF4 31 265 1.3E-98 T 22-04-2016 PNUC_RS00540 23d8413271b4c77be7391df6b8c4dc12 265 Pfam PF02405 Permease MlaE 50 260 3.3E-74 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PNUC_RS00540 23d8413271b4c77be7391df6b8c4dc12 265 PANTHER PTHR30188 31 265 1.3E-98 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PNUC_RS00540 23d8413271b4c77be7391df6b8c4dc12 265 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 13 264 4.8E-83 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PNUC_RS06600 d60072849a955c123f6d18a8efcf4125 323 Pfam PF04116 Fatty acid hydroxylase superfamily 141 284 2.5E-27 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PNUC_RS00790 d1ffe68cd8625a30c882b21dc70b13e4 267 PANTHER PTHR22854:SF2 1 267 1.8E-106 T 22-04-2016 PNUC_RS00790 d1ffe68cd8625a30c882b21dc70b13e4 267 SUPERFAMILY SSF51366 1 266 1.29E-85 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PNUC_RS00790 d1ffe68cd8625a30c882b21dc70b13e4 267 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 265 1.1E-93 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 PNUC_RS00790 d1ffe68cd8625a30c882b21dc70b13e4 267 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 61 79 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 PNUC_RS00790 d1ffe68cd8625a30c882b21dc70b13e4 267 Gene3D G3DSA:3.20.20.70 1 266 2.1E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS00790 d1ffe68cd8625a30c882b21dc70b13e4 267 PANTHER PTHR22854 1 267 1.8E-106 T 22-04-2016 PNUC_RS00790 d1ffe68cd8625a30c882b21dc70b13e4 267 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 267 35.039 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 PNUC_RS07180 35bcc1c85a7d9676eacfd8c4ae69c689 381 Gene3D G3DSA:3.20.20.70 4 376 2.5E-140 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS07180 35bcc1c85a7d9676eacfd8c4ae69c689 381 PIRSF PIRSF000138 2 380 2.6E-125 T 22-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 PNUC_RS07180 35bcc1c85a7d9676eacfd8c4ae69c689 381 Pfam PF01070 FMN-dependent dehydrogenase 15 376 3.5E-133 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 PNUC_RS07180 35bcc1c85a7d9676eacfd8c4ae69c689 381 PANTHER PTHR10578:SF76 3 381 1.3E-219 T 22-04-2016 PNUC_RS07180 35bcc1c85a7d9676eacfd8c4ae69c689 381 PANTHER PTHR10578 3 381 1.3E-219 T 22-04-2016 PNUC_RS07180 35bcc1c85a7d9676eacfd8c4ae69c689 381 SUPERFAMILY SSF51395 4 376 9.16E-105 T 22-04-2016 PNUC_RS07180 35bcc1c85a7d9676eacfd8c4ae69c689 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 274 280 - T 22-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 SUPERFAMILY SSF81442 27 534 9.81E-192 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 31 533 6.7E-209 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 258 312 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 Gene3D G3DSA:1.20.210.10 18 537 1.5E-219 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PANTHER PTHR10422:SF27 17 533 0.0 T 22-04-2016 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PANTHER PTHR10422 17 533 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 39 479 2.9E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 77 100 1.1E-121 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 439 460 1.1E-121 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 361 379 1.1E-121 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 194 1.1E-121 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 104 128 1.1E-121 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 30 55 1.1E-121 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 147 159 1.1E-121 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 389 408 1.1E-121 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 302 317 1.1E-121 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 256 277 1.1E-121 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 347 1.1E-121 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS10050 fcd165d15c4d476e745f9f0bb8088ad2 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 205 224 1.1E-121 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PNUC_RS06770 6b00ce2c2082c34d5cc96a3338fb5d78 423 PIRSF PIRSF004640 14 421 1.7E-128 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PNUC_RS06770 6b00ce2c2082c34d5cc96a3338fb5d78 423 Pfam PF04551 GcpE protein 29 410 3.0E-113 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PNUC_RS06770 6b00ce2c2082c34d5cc96a3338fb5d78 423 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 19 415 28.764 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PNUC_RS06770 6b00ce2c2082c34d5cc96a3338fb5d78 423 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 21 410 5.3E-116 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PNUC_RS06770 6b00ce2c2082c34d5cc96a3338fb5d78 423 PANTHER PTHR30454 32 420 8.0E-141 T 22-04-2016 PNUC_RS09150 f2b08a34c78e75891ba795ddf51fe162 350 Gene3D G3DSA:3.30.1330.10 27 175 4.1E-63 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PNUC_RS09150 f2b08a34c78e75891ba795ddf51fe162 350 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 349 46.305 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PNUC_RS09150 f2b08a34c78e75891ba795ddf51fe162 350 SUPERFAMILY SSF55326 12 175 4.19E-52 T 22-04-2016 PNUC_RS09150 f2b08a34c78e75891ba795ddf51fe162 350 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 339 1.4E-138 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PNUC_RS09150 f2b08a34c78e75891ba795ddf51fe162 350 SUPERFAMILY SSF56042 177 345 3.14E-60 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS09150 f2b08a34c78e75891ba795ddf51fe162 350 Pfam PF00586 AIR synthase related protein, N-terminal domain 63 169 1.1E-14 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PNUC_RS09150 f2b08a34c78e75891ba795ddf51fe162 350 Gene3D G3DSA:3.90.650.10 177 347 8.0E-67 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS09150 f2b08a34c78e75891ba795ddf51fe162 350 Pfam PF02769 AIR synthase related protein, C-terminal domain 182 343 4.3E-38 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PNUC_RS09150 f2b08a34c78e75891ba795ddf51fe162 350 PANTHER PTHR10520 12 349 2.0E-209 T 22-04-2016 PNUC_RS01930 f70de5aefa37cfb58357d61479dcafa3 320 Gene3D G3DSA:3.90.420.10 65 317 9.6E-71 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PNUC_RS01930 f70de5aefa37cfb58357d61479dcafa3 320 PANTHER PTHR19372 44 315 5.9E-135 T 22-04-2016 PNUC_RS01930 f70de5aefa37cfb58357d61479dcafa3 320 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 3 320 58.303 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 PNUC_RS01930 f70de5aefa37cfb58357d61479dcafa3 320 PANTHER PTHR19372:SF1 44 315 5.9E-135 T 22-04-2016 PNUC_RS01930 f70de5aefa37cfb58357d61479dcafa3 320 Pfam PF00174 Oxidoreductase molybdopterin binding domain 98 253 7.9E-28 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PNUC_RS01930 f70de5aefa37cfb58357d61479dcafa3 320 SUPERFAMILY SSF56524 65 316 1.83E-91 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 SUPERFAMILY SSF48452 7 211 3.41E-48 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 Gene3D G3DSA:3.40.50.2000 427 494 1.7E-10 T 22-04-2016 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 Gene3D G3DSA:1.25.40.10 7 75 2.6E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 Gene3D G3DSA:1.25.40.10 76 142 7.3E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 Gene3D G3DSA:1.25.40.10 143 233 7.2E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 Pfam PF13181 Tetratricopeptide repeat 107 138 0.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 PANTHER PTHR23083 7 233 2.0E-49 T 22-04-2016 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 SMART SM00028 39 72 0.0027 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 SMART SM00028 73 106 1.6E-8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 SMART SM00028 175 208 5.2E-8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 SMART SM00028 5 38 76.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 SMART SM00028 141 174 8.5E-8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 SMART SM00028 107 140 1.7E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 Pfam PF13432 Tetratricopeptide repeat 9 73 5.0E-8 T 22-04-2016 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 SUPERFAMILY SSF53756 264 504 6.91E-21 T 22-04-2016 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 Pfam PF00515 Tetratricopeptide repeat 176 208 5.2E-10 T 22-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 Pfam PF00515 Tetratricopeptide repeat 141 174 1.9E-9 T 22-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 PNUC_RS09470 cdbf07509b01fbee3e27d4d358f0d70d 523 Pfam PF00515 Tetratricopeptide repeat 74 106 4.9E-10 T 22-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 281 289 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 PANTHER PTHR22924:SF20 27 288 2.6E-62 T 22-04-2016 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 Gene3D G3DSA:3.10.20.30 224 328 3.2E-20 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 SUPERFAMILY SSF52343 105 231 2.75E-27 T 22-04-2016 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 251 318 7.7E-8 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 PRINTS PR00409 Phthalate dioxygenase reductase family signature 59 73 2.4E-48 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 PRINTS PR00409 Phthalate dioxygenase reductase family signature 198 206 2.4E-48 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 PRINTS PR00409 Phthalate dioxygenase reductase family signature 97 111 2.4E-48 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 PRINTS PR00409 Phthalate dioxygenase reductase family signature 37 47 2.4E-48 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 PRINTS PR00409 Phthalate dioxygenase reductase family signature 47 59 2.4E-48 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 PRINTS PR00409 Phthalate dioxygenase reductase family signature 144 153 2.4E-48 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 PRINTS PR00409 Phthalate dioxygenase reductase family signature 83 97 2.4E-48 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 PRINTS PR00409 Phthalate dioxygenase reductase family signature 119 138 2.4E-48 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 SUPERFAMILY SSF63380 10 107 7.35E-26 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 PANTHER PTHR22924 27 288 2.6E-62 T 22-04-2016 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 Gene3D G3DSA:2.40.30.10 9 108 8.9E-33 T 22-04-2016 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 Pfam PF00175 Oxidoreductase NAD-binding domain 120 212 1.5E-6 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 Gene3D G3DSA:3.40.50.80 109 223 6.8E-24 T 22-04-2016 PNUC_RS08050 94436c002ae66c07480d91665fe8bf26 330 SUPERFAMILY SSF54292 222 329 2.36E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS02265 010be3f5179be890548e9553a9812955 348 Gene3D G3DSA:3.40.50.720 1 238 3.6E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02265 010be3f5179be890548e9553a9812955 348 Gene3D G3DSA:3.90.25.10 255 325 1.4E-38 T 22-04-2016 PNUC_RS02265 010be3f5179be890548e9553a9812955 348 PANTHER PTHR10366 3 342 5.0E-112 T 22-04-2016 PNUC_RS02265 010be3f5179be890548e9553a9812955 348 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 251 1.1E-46 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PNUC_RS02265 010be3f5179be890548e9553a9812955 348 SUPERFAMILY SSF51735 2 336 1.71E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02265 010be3f5179be890548e9553a9812955 348 PANTHER PTHR10366:SF253 3 342 5.0E-112 T 22-04-2016 PNUC_RS03715 0ce0fd7e86eac5216bc1159291bc0727 609 Pfam PF05170 AsmA family 1 176 4.1E-25 T 22-04-2016 IPR007844 AsmA PNUC_RS03715 0ce0fd7e86eac5216bc1159291bc0727 609 Pfam PF13502 AsmA-like C-terminal region 342 543 6.8E-11 T 22-04-2016 IPR032712 AsmA-like, C-terminal PNUC_RS03715 0ce0fd7e86eac5216bc1159291bc0727 609 PANTHER PTHR30441:SF4 1 175 1.5E-23 T 22-04-2016 PNUC_RS03715 0ce0fd7e86eac5216bc1159291bc0727 609 PANTHER PTHR30441 1 175 1.5E-23 T 22-04-2016 PNUC_RS04890 7dde7033d8ddec0125fdc98d8a253a49 219 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 38 198 1.1E-21 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain PNUC_RS04890 7dde7033d8ddec0125fdc98d8a253a49 219 SUPERFAMILY SSF52266 33 212 2.44E-47 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain PNUC_RS04890 7dde7033d8ddec0125fdc98d8a253a49 219 Gene3D G3DSA:3.40.50.1110 33 211 5.7E-55 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain PNUC_RS04890 7dde7033d8ddec0125fdc98d8a253a49 219 PANTHER PTHR30383:SF5 36 209 8.6E-40 T 22-04-2016 PNUC_RS04890 7dde7033d8ddec0125fdc98d8a253a49 219 PANTHER PTHR30383 36 209 8.6E-40 T 22-04-2016 PNUC_RS09235 d576c6ddc314ca349ea88c6646dc6db7 475 PANTHER PTHR30624:SF4 10 475 2.1E-226 T 22-04-2016 PNUC_RS09235 d576c6ddc314ca349ea88c6646dc6db7 475 Pfam PF01523 Putative modulator of DNA gyrase 34 326 5.3E-67 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS09235 d576c6ddc314ca349ea88c6646dc6db7 475 SUPERFAMILY SSF111283 16 474 1.31E-131 T 22-04-2016 PNUC_RS09235 d576c6ddc314ca349ea88c6646dc6db7 475 PIRSF PIRSF004919 13 475 3.5E-132 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS09235 d576c6ddc314ca349ea88c6646dc6db7 475 PANTHER PTHR30624 10 475 2.1E-226 T 22-04-2016 PNUC_RS09900 65a013cc2f8a6e8e8f44c047ca86a46a 190 Pfam PF03968 OstA-like protein 41 157 4.1E-10 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal PNUC_RS09900 65a013cc2f8a6e8e8f44c047ca86a46a 190 Gene3D G3DSA:2.60.450.10 29 164 4.8E-21 T 22-04-2016 PNUC_RS01500 abbb4a3e9e3eceaecc05321faf429e61 149 PANTHER PTHR30558 5 133 1.9E-28 T 22-04-2016 PNUC_RS01500 abbb4a3e9e3eceaecc05321faf429e61 149 Pfam PF02472 Biopolymer transport protein ExbD/TolR 23 146 2.1E-25 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PNUC_RS01500 abbb4a3e9e3eceaecc05321faf429e61 149 PANTHER PTHR30558:SF5 5 133 1.9E-28 T 22-04-2016 PNUC_RS07985 66314232fcbc38052b6824acd7a80fae 299 PANTHER PTHR10625:SF131 7 289 1.9E-109 T 22-04-2016 PNUC_RS07985 66314232fcbc38052b6824acd7a80fae 299 PRINTS PR01270 Histone deacetylase superfamily signature 147 162 1.0E-12 T 22-04-2016 IPR000286 Histone deacetylase superfamily PNUC_RS07985 66314232fcbc38052b6824acd7a80fae 299 PRINTS PR01270 Histone deacetylase superfamily signature 221 231 1.0E-12 T 22-04-2016 IPR000286 Histone deacetylase superfamily PNUC_RS07985 66314232fcbc38052b6824acd7a80fae 299 PRINTS PR01270 Histone deacetylase superfamily signature 112 135 1.0E-12 T 22-04-2016 IPR000286 Histone deacetylase superfamily PNUC_RS07985 66314232fcbc38052b6824acd7a80fae 299 Gene3D G3DSA:3.40.800.20 4 277 5.4E-60 T 22-04-2016 IPR023801 Histone deacetylase domain PNUC_RS07985 66314232fcbc38052b6824acd7a80fae 299 PANTHER PTHR10625 7 289 1.9E-109 T 22-04-2016 IPR000286 Histone deacetylase superfamily PNUC_RS07985 66314232fcbc38052b6824acd7a80fae 299 Pfam PF00850 Histone deacetylase domain 25 277 3.3E-48 T 22-04-2016 IPR023801 Histone deacetylase domain PNUC_RS07985 66314232fcbc38052b6824acd7a80fae 299 SUPERFAMILY SSF52768 4 277 3.41E-75 T 22-04-2016 PNUC_RS07830 8b145f0fbfec02f2bc94a9782d197077 230 Pfam PF04060 Putative Fe-S cluster 17 49 2.7E-13 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 PNUC_RS07830 8b145f0fbfec02f2bc94a9782d197077 230 SUPERFAMILY SSF54862 12 148 2.37E-25 T 22-04-2016 PNUC_RS07830 8b145f0fbfec02f2bc94a9782d197077 230 PANTHER PTHR11938 4 155 2.9E-44 T 22-04-2016 PNUC_RS07830 8b145f0fbfec02f2bc94a9782d197077 230 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 157 3.5E-58 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 PNUC_RS07830 8b145f0fbfec02f2bc94a9782d197077 230 PANTHER PTHR11938:SF64 4 155 2.9E-44 T 22-04-2016 PNUC_RS07830 8b145f0fbfec02f2bc94a9782d197077 230 Pfam PF14697 4Fe-4S dicluster domain 90 144 6.2E-15 T 22-04-2016 PNUC_RS07830 8b145f0fbfec02f2bc94a9782d197077 230 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 97 108 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS07830 8b145f0fbfec02f2bc94a9782d197077 230 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 127 138 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS07830 8b145f0fbfec02f2bc94a9782d197077 230 Gene3D G3DSA:3.30.70.20 91 180 6.4E-15 T 22-04-2016 PNUC_RS07030 7857850e886f009a05d94c238d94f885 192 Gene3D G3DSA:1.20.5.440 6 41 5.7E-7 T 22-04-2016 PNUC_RS07030 7857850e886f009a05d94c238d94f885 192 SUPERFAMILY SSF51182 6 191 4.66E-47 T 22-04-2016 IPR011051 RmlC-like cupin domain PNUC_RS07030 7857850e886f009a05d94c238d94f885 192 Pfam PF05995 Cysteine dioxygenase type I 40 162 1.6E-6 T 22-04-2016 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|UniPathway: UPA00012 PNUC_RS07030 7857850e886f009a05d94c238d94f885 192 Gene3D G3DSA:2.60.120.10 42 179 4.0E-37 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS04045 bf9351e19aa665dd59f380b0e1fb7467 279 SUPERFAMILY SSF110997 199 273 3.01E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 PNUC_RS04045 bf9351e19aa665dd59f380b0e1fb7467 279 Pfam PF05036 Sporulation related domain 200 271 2.4E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 PNUC_RS04045 bf9351e19aa665dd59f380b0e1fb7467 279 Gene3D G3DSA:3.30.70.1070 199 274 1.1E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 PNUC_RS02010 3d3f7a4c1b7c4cdb2c70f8fd72a6663a 107 PANTHER PTHR11938 1 82 1.1E-42 T 22-04-2016 PNUC_RS02010 3d3f7a4c1b7c4cdb2c70f8fd72a6663a 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.1E-15 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 PNUC_RS02010 3d3f7a4c1b7c4cdb2c70f8fd72a6663a 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.1E-15 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 PNUC_RS02010 3d3f7a4c1b7c4cdb2c70f8fd72a6663a 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.1E-15 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 PNUC_RS02010 3d3f7a4c1b7c4cdb2c70f8fd72a6663a 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS02010 3d3f7a4c1b7c4cdb2c70f8fd72a6663a 107 SUPERFAMILY SSF54862 1 98 1.24E-25 T 22-04-2016 PNUC_RS02010 3d3f7a4c1b7c4cdb2c70f8fd72a6663a 107 Gene3D G3DSA:3.30.70.20 3 102 4.2E-22 T 22-04-2016 PNUC_RS02010 3d3f7a4c1b7c4cdb2c70f8fd72a6663a 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 105 3.2E-19 T 22-04-2016 IPR022569 Ferredoxin, C-terminal PNUC_RS02010 3d3f7a4c1b7c4cdb2c70f8fd72a6663a 107 Pfam PF00037 4Fe-4S binding domain 34 56 1.5E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS02010 3d3f7a4c1b7c4cdb2c70f8fd72a6663a 107 PANTHER PTHR11938:SF101 1 82 1.1E-42 T 22-04-2016 PNUC_RS02010 3d3f7a4c1b7c4cdb2c70f8fd72a6663a 107 Pfam PF12800 4Fe-4S binding domain 7 23 0.14 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS04770 669c7c00d491792f664397cd5cce09f7 182 Gene3D G3DSA:3.40.630.30 11 178 1.4E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS04770 669c7c00d491792f664397cd5cce09f7 182 SUPERFAMILY SSF55729 10 178 4.97E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS04770 669c7c00d491792f664397cd5cce09f7 182 PANTHER PTHR23091 82 178 2.0E-20 T 22-04-2016 PNUC_RS04770 669c7c00d491792f664397cd5cce09f7 182 Pfam PF00583 Acetyltransferase (GNAT) family 91 150 5.9E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 PNUC_RS04330 b16c73cfef2ac614d42cfd3c11e79c57 121 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 9.0E-21 T 22-04-2016 PNUC_RS04330 b16c73cfef2ac614d42cfd3c11e79c57 121 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PNUC_RS04330 b16c73cfef2ac614d42cfd3c11e79c57 121 PANTHER PTHR10986 2 118 9.6E-58 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PNUC_RS04330 b16c73cfef2ac614d42cfd3c11e79c57 121 Gene3D G3DSA:1.10.1900.20 55 116 4.5E-29 T 22-04-2016 PNUC_RS04330 b16c73cfef2ac614d42cfd3c11e79c57 121 Pfam PF00453 Ribosomal protein L20 3 109 8.1E-48 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PNUC_RS04330 b16c73cfef2ac614d42cfd3c11e79c57 121 SUPERFAMILY SSF74731 2 115 1.29E-47 T 22-04-2016 PNUC_RS04330 b16c73cfef2ac614d42cfd3c11e79c57 121 PANTHER PTHR10986:SF12 2 118 9.6E-58 T 22-04-2016 PNUC_RS04330 b16c73cfef2ac614d42cfd3c11e79c57 121 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 9.5E-47 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PNUC_RS04330 b16c73cfef2ac614d42cfd3c11e79c57 121 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.3E-37 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PNUC_RS04330 b16c73cfef2ac614d42cfd3c11e79c57 121 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.3E-37 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PNUC_RS04330 b16c73cfef2ac614d42cfd3c11e79c57 121 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.3E-37 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PNUC_RS04330 b16c73cfef2ac614d42cfd3c11e79c57 121 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.86 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PNUC_RS03640 30850c87480e1d1dd7ff1e3561ea8800 343 Gene3D G3DSA:3.60.60.10 11 314 3.4E-91 T 22-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 PNUC_RS03640 30850c87480e1d1dd7ff1e3561ea8800 343 PANTHER PTHR35527 10 340 4.8E-141 T 22-04-2016 PNUC_RS03640 30850c87480e1d1dd7ff1e3561ea8800 343 SUPERFAMILY SSF56235 11 324 1.16E-86 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS03640 30850c87480e1d1dd7ff1e3561ea8800 343 PANTHER PTHR35527:SF2 10 340 4.8E-141 T 22-04-2016 PNUC_RS03640 30850c87480e1d1dd7ff1e3561ea8800 343 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 11 306 3.0E-34 T 22-04-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal PNUC_RS00310 b9c0b3790ca2940852c9ce403d287363 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00310 b9c0b3790ca2940852c9ce403d287363 103 SMART SM01403 7 101 1.2E-54 T 22-04-2016 IPR027486 Ribosomal protein S10 domain PNUC_RS00310 b9c0b3790ca2940852c9ce403d287363 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.026 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00310 b9c0b3790ca2940852c9ce403d287363 103 Gene3D G3DSA:3.30.70.600 3 102 6.8E-42 T 22-04-2016 IPR027486 Ribosomal protein S10 domain PNUC_RS00310 b9c0b3790ca2940852c9ce403d287363 103 PANTHER PTHR11700 1 102 3.1E-48 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00310 b9c0b3790ca2940852c9ce403d287363 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 3.1E-34 T 22-04-2016 IPR027486 Ribosomal protein S10 domain PNUC_RS00310 b9c0b3790ca2940852c9ce403d287363 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.2E-45 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00310 b9c0b3790ca2940852c9ce403d287363 103 SUPERFAMILY SSF54999 5 102 1.44E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain PNUC_RS00310 b9c0b3790ca2940852c9ce403d287363 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.3E-16 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00310 b9c0b3790ca2940852c9ce403d287363 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.3E-16 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00310 b9c0b3790ca2940852c9ce403d287363 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.3E-16 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PNUC_RS04930 73b1676f666c70aad732dfbe66ff78ea 287 PANTHER PTHR21057 8 286 7.5E-158 T 22-04-2016 PNUC_RS04930 73b1676f666c70aad732dfbe66ff78ea 287 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 11 278 52.206 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PNUC_RS04930 73b1676f666c70aad732dfbe66ff78ea 287 Pfam PF00793 DAHP synthetase I family 11 275 5.0E-70 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PNUC_RS04930 73b1676f666c70aad732dfbe66ff78ea 287 SUPERFAMILY SSF51569 3 276 7.33E-103 T 22-04-2016 PNUC_RS04930 73b1676f666c70aad732dfbe66ff78ea 287 PANTHER PTHR21057:SF2 8 286 7.5E-158 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PNUC_RS04930 73b1676f666c70aad732dfbe66ff78ea 287 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 16 276 8.5E-122 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PNUC_RS04930 73b1676f666c70aad732dfbe66ff78ea 287 Gene3D G3DSA:3.20.20.70 15 277 1.9E-114 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS09035 717c4c49646d4539c49aa8bb4f7ceb61 209 PANTHER PTHR10520 1 194 4.4E-99 T 22-04-2016 PNUC_RS09035 717c4c49646d4539c49aa8bb4f7ceb61 209 Pfam PF00551 Formyl transferase 4 182 1.8E-60 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS09035 717c4c49646d4539c49aa8bb4f7ceb61 209 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.343 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 PNUC_RS09035 717c4c49646d4539c49aa8bb4f7ceb61 209 SUPERFAMILY SSF53328 4 198 2.09E-66 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS09035 717c4c49646d4539c49aa8bb4f7ceb61 209 Gene3D G3DSA:3.40.50.170 2 196 1.3E-71 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS09035 717c4c49646d4539c49aa8bb4f7ceb61 209 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 192 8.3E-74 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 PNUC_RS09035 717c4c49646d4539c49aa8bb4f7ceb61 209 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS03475 2f80c8906bc13ae8d24e6afd230f195b 191 Pfam PF01169 Uncharacterized protein family UPF0016 111 184 4.9E-23 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 PNUC_RS03475 2f80c8906bc13ae8d24e6afd230f195b 191 Pfam PF01169 Uncharacterized protein family UPF0016 9 83 6.9E-20 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 PNUC_RS03475 2f80c8906bc13ae8d24e6afd230f195b 191 PANTHER PTHR12608 1 188 1.3E-35 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 PNUC_RS01795 c74c8ea6fc2a6dbdccc4e48f16e426fb 273 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 93 126 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PNUC_RS01795 c74c8ea6fc2a6dbdccc4e48f16e426fb 273 Gene3D G3DSA:3.40.1010.10 13 128 4.4E-42 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PNUC_RS01795 c74c8ea6fc2a6dbdccc4e48f16e426fb 273 PANTHER PTHR21091:SF16 10 228 5.4E-55 T 22-04-2016 PNUC_RS01795 c74c8ea6fc2a6dbdccc4e48f16e426fb 273 Gene3D G3DSA:3.30.950.10 129 257 1.3E-25 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PNUC_RS01795 c74c8ea6fc2a6dbdccc4e48f16e426fb 273 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 14 251 1.5E-78 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PNUC_RS01795 c74c8ea6fc2a6dbdccc4e48f16e426fb 273 SUPERFAMILY SSF53790 10 248 9.81E-60 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PNUC_RS01795 c74c8ea6fc2a6dbdccc4e48f16e426fb 273 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 19 33 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PNUC_RS01795 c74c8ea6fc2a6dbdccc4e48f16e426fb 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 227 1.1E-45 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PNUC_RS01795 c74c8ea6fc2a6dbdccc4e48f16e426fb 273 PANTHER PTHR21091 10 228 5.4E-55 T 22-04-2016 PNUC_RS02320 f184728c71766ba015d01f27656ae90c 154 Gene3D G3DSA:3.90.1170.40 2 141 1.1E-55 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02320 f184728c71766ba015d01f27656ae90c 154 PANTHER PTHR23404:SF2 30 154 7.1E-36 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02320 f184728c71766ba015d01f27656ae90c 154 Pfam PF02391 MoaE protein 8 121 1.6E-36 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02320 f184728c71766ba015d01f27656ae90c 154 PANTHER PTHR23404 30 154 7.1E-36 T 22-04-2016 PNUC_RS02320 f184728c71766ba015d01f27656ae90c 154 SUPERFAMILY SSF54690 5 151 2.62E-50 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS08970 28fd24d59934e4890ff752c65315f932 397 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 10 394 40.839 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PNUC_RS08970 28fd24d59934e4890ff752c65315f932 397 Pfam PF00202 Aminotransferase class-III 22 392 4.6E-101 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PNUC_RS08970 28fd24d59934e4890ff752c65315f932 397 PANTHER PTHR11986 5 397 4.9E-170 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PNUC_RS08970 28fd24d59934e4890ff752c65315f932 397 SUPERFAMILY SSF53383 11 395 4.87E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS08970 28fd24d59934e4890ff752c65315f932 397 PANTHER PTHR11986:SF88 5 397 4.9E-170 T 22-04-2016 PNUC_RS08970 28fd24d59934e4890ff752c65315f932 397 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PNUC_RS08970 28fd24d59934e4890ff752c65315f932 397 Gene3D G3DSA:3.40.640.10 57 295 9.0E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS08970 28fd24d59934e4890ff752c65315f932 397 Gene3D G3DSA:3.90.1150.10 301 395 1.2E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS08970 28fd24d59934e4890ff752c65315f932 397 Gene3D G3DSA:3.90.1150.10 21 56 1.2E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS02290 e10338e3cc6c2ddb922bd5022fdef030 125 PANTHER PTHR21192:SF3 14 122 4.0E-26 T 22-04-2016 PNUC_RS02290 e10338e3cc6c2ddb922bd5022fdef030 125 PANTHER PTHR21192 14 122 4.0E-26 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein PNUC_RS02290 e10338e3cc6c2ddb922bd5022fdef030 125 SUPERFAMILY SSF64076 2 122 5.76E-37 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein PNUC_RS02290 e10338e3cc6c2ddb922bd5022fdef030 125 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 121 2.5E-32 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein PNUC_RS02290 e10338e3cc6c2ddb922bd5022fdef030 125 Gene3D G3DSA:3.40.1230.10 1 123 9.8E-44 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein PNUC_RS10325 3fd4df383cdd50c9e6b2ab76fdcc91d8 273 SUPERFAMILY SSF51735 13 261 5.97E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10325 3fd4df383cdd50c9e6b2ab76fdcc91d8 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 2.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS10325 3fd4df383cdd50c9e6b2ab76fdcc91d8 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 2.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS10325 3fd4df383cdd50c9e6b2ab76fdcc91d8 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 2.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS10325 3fd4df383cdd50c9e6b2ab76fdcc91d8 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS10325 3fd4df383cdd50c9e6b2ab76fdcc91d8 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 260 1.4E-34 T 22-04-2016 PNUC_RS10325 3fd4df383cdd50c9e6b2ab76fdcc91d8 273 Gene3D G3DSA:3.40.50.720 14 261 3.8E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10325 3fd4df383cdd50c9e6b2ab76fdcc91d8 273 PANTHER PTHR24322 174 208 8.5E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS10325 3fd4df383cdd50c9e6b2ab76fdcc91d8 273 PANTHER PTHR24322 17 142 8.5E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07960 d7031e6e0e293f36fa30f9e666ecbf56 282 SMART SM00849 43 246 2.7E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS07960 d7031e6e0e293f36fa30f9e666ecbf56 282 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 37 282 34.061 T 22-04-2016 IPR022877 Protein of unknown funcion UPF0173 PNUC_RS07960 d7031e6e0e293f36fa30f9e666ecbf56 282 PANTHER PTHR15032:SF13 33 282 3.8E-45 T 22-04-2016 PNUC_RS07960 d7031e6e0e293f36fa30f9e666ecbf56 282 Gene3D G3DSA:3.60.15.10 33 282 2.6E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS07960 d7031e6e0e293f36fa30f9e666ecbf56 282 PANTHER PTHR15032 33 282 3.8E-45 T 22-04-2016 PNUC_RS07960 d7031e6e0e293f36fa30f9e666ecbf56 282 SUPERFAMILY SSF56281 35 272 2.62E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS07960 d7031e6e0e293f36fa30f9e666ecbf56 282 Pfam PF13483 Beta-lactamase superfamily domain 39 246 1.4E-25 T 22-04-2016 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 Pfam PF06827 Zinc finger found in FPG and IleRS 914 941 5.1E-8 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 17 869 1.1E-264 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 666 3.2E-208 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 Gene3D G3DSA:1.10.730.10 666 853 1.4E-44 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 Gene3D G3DSA:3.40.50.620 415 661 7.4E-128 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 Gene3D G3DSA:3.40.50.620 16 199 7.4E-128 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 SUPERFAMILY SSF47323 677 943 1.46E-69 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 Gene3D G3DSA:3.90.740.10 205 398 7.5E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 Pfam PF08264 Anticodon-binding domain of tRNA 710 868 7.6E-28 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 4 944 20.169 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 PANTHER PTHR11946 236 261 0.0 T 22-04-2016 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 PANTHER PTHR11946 10 214 0.0 T 22-04-2016 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 PANTHER PTHR11946 284 897 0.0 T 22-04-2016 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 SUPERFAMILY SSF52374 10 201 8.92E-124 T 22-04-2016 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 SUPERFAMILY SSF52374 412 673 8.92E-124 T 22-04-2016 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 PANTHER PTHR11946:SF11 236 261 0.0 T 22-04-2016 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 PANTHER PTHR11946:SF11 10 214 0.0 T 22-04-2016 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 PANTHER PTHR11946:SF11 284 897 0.0 T 22-04-2016 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 SUPERFAMILY SSF50677 230 412 7.85E-47 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 71 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 53 64 1.4E-25 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 410 425 1.4E-25 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 586 595 1.4E-25 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PNUC_RS09045 79d427d12dfd4273c523b2924cd49942 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 1.4E-25 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 SUPERFAMILY SSF54826 4 136 1.43E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 Pfam PF03952 Enolase, N-terminal domain 4 133 7.1E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 ProSitePatterns PS00164 Enolase signature. 334 347 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 SUPERFAMILY SSF51604 140 426 7.92E-127 T 22-04-2016 IPR029065 Enolase C-terminal domain-like PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 SMART SM01192 139 425 3.1E-218 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 PIRSF PIRSF001400 1 425 3.2E-190 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 Hamap MF_00318 Enolase [eno]. 2 411 44.563 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 PANTHER PTHR11902 1 428 2.2E-250 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 Gene3D G3DSA:3.30.390.10 4 126 4.0E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 Gene3D G3DSA:3.20.20.120 128 425 3.4E-132 T 22-04-2016 IPR029065 Enolase C-terminal domain-like PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 SMART SM01193 4 134 9.5E-93 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 PRINTS PR00148 Enolase signature 161 174 2.1E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 PRINTS PR00148 Enolase signature 334 348 2.1E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 PRINTS PR00148 Enolase signature 37 51 2.1E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 PRINTS PR00148 Enolase signature 311 322 2.1E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 PRINTS PR00148 Enolase signature 363 380 2.1E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 PRINTS PR00148 Enolase signature 107 123 2.1E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 424 3.3E-132 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PNUC_RS04935 51b63d86913e361e84dd30265da66d57 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 3.0E-208 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PNUC_RS07375 7f80b25d3380555184f515c9595dc2f0 270 Pfam PF11249 Protein of unknown function (DUF3047) 62 258 4.7E-60 T 22-04-2016 IPR021409 Protein of unknown function DUF3047 PNUC_RS08950 9ed5792ae0018b16ed1a299434087193 500 PANTHER PTHR35342 2 500 1.4E-287 T 22-04-2016 PNUC_RS08950 9ed5792ae0018b16ed1a299434087193 500 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 3.7E-150 T 22-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane PNUC_RS08950 9ed5792ae0018b16ed1a299434087193 500 PANTHER PTHR35342:SF2 2 500 1.4E-287 T 22-04-2016 PNUC_RS03975 57a6f4ae29fa2c65a77bc2fac6915f08 89 SUPERFAMILY SSF109910 7 65 4.45E-15 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase PNUC_RS03975 57a6f4ae29fa2c65a77bc2fac6915f08 89 Gene3D G3DSA:1.10.150.250 6 74 9.1E-18 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase PNUC_RS03975 57a6f4ae29fa2c65a77bc2fac6915f08 89 Pfam PF03937 Flavinator of succinate dehydrogenase 9 85 1.2E-20 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase PNUC_RS09225 14036ecc18b20744270759c0cf6198fc 1384 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 26 1336 3.4E-177 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 PNUC_RS09225 14036ecc18b20744270759c0cf6198fc 1384 Pfam PF13116 Protein of unknown function 558 847 3.3E-44 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 PNUC_RS09225 14036ecc18b20744270759c0cf6198fc 1384 PANTHER PTHR38690 17 1352 8.4E-106 T 22-04-2016 PNUC_RS09225 14036ecc18b20744270759c0cf6198fc 1384 Pfam PF13502 AsmA-like C-terminal region 1083 1330 2.3E-49 T 22-04-2016 IPR032712 AsmA-like, C-terminal PNUC_RS05080 ba38fe623758f8c41681e96e1f11a871 182 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 180 18.237 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 PNUC_RS05080 ba38fe623758f8c41681e96e1f11a871 182 PANTHER PTHR36917:SF1 1 177 3.5E-52 T 22-04-2016 PNUC_RS05080 ba38fe623758f8c41681e96e1f11a871 182 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 9.6E-55 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 PNUC_RS05080 ba38fe623758f8c41681e96e1f11a871 182 Pfam PF04279 Intracellular septation protein A 1 179 2.2E-67 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 PNUC_RS05080 ba38fe623758f8c41681e96e1f11a871 182 PANTHER PTHR36917 1 177 3.5E-52 T 22-04-2016 PNUC_RS03920 ccccf0a0c92827867a141c39d3beb9b9 235 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 83 1.1E-8 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PNUC_RS03920 ccccf0a0c92827867a141c39d3beb9b9 235 PANTHER PTHR11260 2 205 2.0E-70 T 22-04-2016 PNUC_RS03920 ccccf0a0c92827867a141c39d3beb9b9 235 SUPERFAMILY SSF47616 89 205 2.32E-38 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS03920 ccccf0a0c92827867a141c39d3beb9b9 235 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 200 3.6E-11 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal PNUC_RS03920 ccccf0a0c92827867a141c39d3beb9b9 235 PANTHER PTHR11260:SF178 2 205 2.0E-70 T 22-04-2016 PNUC_RS03920 ccccf0a0c92827867a141c39d3beb9b9 235 SUPERFAMILY SSF52833 3 88 1.45E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS03920 ccccf0a0c92827867a141c39d3beb9b9 235 Gene3D G3DSA:3.40.30.10 2 86 6.6E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS03920 ccccf0a0c92827867a141c39d3beb9b9 235 Gene3D G3DSA:1.20.1050.10 87 203 9.9E-54 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PNUC_RS00850 1ccd81db43b92d829228be5b72e0894b 332 PANTHER PTHR22976 16 325 4.5E-154 T 22-04-2016 PNUC_RS00850 1ccd81db43b92d829228be5b72e0894b 332 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 230 321 1.1E-18 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PNUC_RS00850 1ccd81db43b92d829228be5b72e0894b 332 Gene3D G3DSA:3.20.20.70 16 324 4.7E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS00850 1ccd81db43b92d829228be5b72e0894b 332 TIGRFAM TIGR00433 bioB: biotin synthase 25 321 4.4E-122 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PNUC_RS00850 1ccd81db43b92d829228be5b72e0894b 332 PANTHER PTHR22976:SF1 16 325 4.5E-154 T 22-04-2016 PNUC_RS00850 1ccd81db43b92d829228be5b72e0894b 332 SMART SM00729 53 265 6.0E-38 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PNUC_RS00850 1ccd81db43b92d829228be5b72e0894b 332 SUPERFAMILY SSF102114 16 321 4.19E-86 T 22-04-2016 PNUC_RS00850 1ccd81db43b92d829228be5b72e0894b 332 Pfam PF04055 Radical SAM superfamily 60 216 4.4E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PNUC_RS00850 1ccd81db43b92d829228be5b72e0894b 332 Hamap MF_01694 Biotin synthase [bioB]. 15 323 41.788 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PNUC_RS00850 1ccd81db43b92d829228be5b72e0894b 332 PIRSF PIRSF001619 2 329 6.8E-130 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PNUC_RS00850 1ccd81db43b92d829228be5b72e0894b 332 SMART SM00876 230 322 1.7E-46 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 PANTHER PTHR11938:SF96 142 177 7.1E-87 T 22-04-2016 PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 PANTHER PTHR11938:SF96 1 124 7.1E-87 T 22-04-2016 PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 PRINTS PR00354 7Fe ferredoxin signature 83 100 1.7E-5 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 PRINTS PR00354 7Fe ferredoxin signature 66 76 1.7E-5 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 PRINTS PR00354 7Fe ferredoxin signature 56 66 1.7E-5 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 Gene3D G3DSA:3.30.70.20 64 119 4.5E-21 T 22-04-2016 PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 PANTHER PTHR11938 142 177 7.1E-87 T 22-04-2016 PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 PANTHER PTHR11938 1 124 7.1E-87 T 22-04-2016 PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 Pfam PF13247 4Fe-4S dicluster domain 53 164 2.4E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 SUPERFAMILY SSF54862 1 181 6.49E-50 T 22-04-2016 PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 Gene3D G3DSA:3.30.70.20 3 63 1.4E-22 T 22-04-2016 PNUC_RS07315 d5e64b2b5a7f9bd6c4a894423dd06ad7 218 Gene3D G3DSA:3.30.70.20 120 186 1.4E-22 T 22-04-2016 PNUC_RS03145 e160a9975dc685435b062282b9885883 394 SUPERFAMILY SSF53383 10 379 8.17E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS03145 e160a9975dc685435b062282b9885883 394 PANTHER PTHR21152 10 394 3.5E-129 T 22-04-2016 PNUC_RS03145 e160a9975dc685435b062282b9885883 394 Pfam PF00266 Aminotransferase class-V 13 327 3.5E-38 T 22-04-2016 IPR000192 Aminotransferase class V domain PNUC_RS03145 e160a9975dc685435b062282b9885883 394 PIRSF PIRSF000524 6 394 1.2E-123 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PNUC_RS03145 e160a9975dc685435b062282b9885883 394 PANTHER PTHR21152:SF21 10 394 3.5E-129 T 22-04-2016 PNUC_RS03145 e160a9975dc685435b062282b9885883 394 Gene3D G3DSA:3.90.1150.10 270 380 1.1E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS03145 e160a9975dc685435b062282b9885883 394 Gene3D G3DSA:3.40.640.10 23 269 2.2E-50 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS02370 1ba227fe22beace69f27fb384215ee31 58 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 7.7E-21 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type PNUC_RS02370 1ba227fe22beace69f27fb384215ee31 58 PANTHER PTHR41532 2 48 6.3E-13 T 22-04-2016 PNUC_RS02370 1ba227fe22beace69f27fb384215ee31 58 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 5.5E-18 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type PNUC_RS00385 7a3af8e82fd4ebd926d40329d952d9f8 131 Pfam PF00410 Ribosomal protein S8 5 130 6.3E-49 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00385 7a3af8e82fd4ebd926d40329d952d9f8 131 PANTHER PTHR11758 1 131 1.7E-58 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00385 7a3af8e82fd4ebd926d40329d952d9f8 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00385 7a3af8e82fd4ebd926d40329d952d9f8 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 31.221 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00385 7a3af8e82fd4ebd926d40329d952d9f8 131 Gene3D G3DSA:3.30.1370.30 3 72 8.7E-29 T 22-04-2016 PNUC_RS00385 7a3af8e82fd4ebd926d40329d952d9f8 131 SUPERFAMILY SSF56047 3 130 9.03E-47 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00385 7a3af8e82fd4ebd926d40329d952d9f8 131 Gene3D G3DSA:3.30.1490.10 75 130 1.1E-26 T 22-04-2016 PNUC_RS02645 9a42a9545e74bb926be4b2eb7c630874 142 SUPERFAMILY SSF47781 34 95 2.56E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PNUC_RS02645 9a42a9545e74bb926be4b2eb7c630874 142 Gene3D G3DSA:1.10.150.280 33 96 3.9E-19 T 22-04-2016 PNUC_RS02645 9a42a9545e74bb926be4b2eb7c630874 142 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 34 93 1.2E-15 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain PNUC_RS02645 9a42a9545e74bb926be4b2eb7c630874 142 PANTHER PTHR21180 34 93 1.3E-12 T 22-04-2016 PNUC_RS02645 9a42a9545e74bb926be4b2eb7c630874 142 Pfam PF12836 Helix-hairpin-helix motif 34 92 1.3E-14 T 22-04-2016 PNUC_RS08495 0a8e362ae75529e57d52496feb24d3c9 220 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 17 193 3.7E-40 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal PNUC_RS08495 0a8e362ae75529e57d52496feb24d3c9 220 Gene3D G3DSA:3.40.225.10 8 218 7.9E-59 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal PNUC_RS08495 0a8e362ae75529e57d52496feb24d3c9 220 PANTHER PTHR22789:SF6 3 220 1.7E-98 T 22-04-2016 PNUC_RS08495 0a8e362ae75529e57d52496feb24d3c9 220 SMART SM01007 16 194 6.5E-54 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal PNUC_RS08495 0a8e362ae75529e57d52496feb24d3c9 220 PANTHER PTHR22789 3 220 1.7E-98 T 22-04-2016 PNUC_RS08495 0a8e362ae75529e57d52496feb24d3c9 220 SUPERFAMILY SSF53639 10 217 6.87E-57 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal PNUC_RS00380 414274c037fa02e09cac456f5acf0484 101 SUPERFAMILY SSF57716 2 101 2.64E-37 T 22-04-2016 PNUC_RS00380 414274c037fa02e09cac456f5acf0484 101 Gene3D G3DSA:4.10.830.10 41 101 9.8E-29 T 22-04-2016 PNUC_RS00380 414274c037fa02e09cac456f5acf0484 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.8E-24 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00380 414274c037fa02e09cac456f5acf0484 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.244 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid PNUC_RS00380 414274c037fa02e09cac456f5acf0484 101 PANTHER PTHR19836 2 101 1.9E-50 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS04245 06ddf5b35ea4d45f60bd334f683d2f82 365 PANTHER PTHR30401 23 263 7.1E-66 T 22-04-2016 PNUC_RS04245 06ddf5b35ea4d45f60bd334f683d2f82 365 Gene3D G3DSA:3.40.50.300 157 275 5.3E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04245 06ddf5b35ea4d45f60bd334f683d2f82 365 SMART SM00450 8 137 7.4E-13 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS04245 06ddf5b35ea4d45f60bd334f683d2f82 365 SUPERFAMILY SSF52540 145 271 2.99E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04245 06ddf5b35ea4d45f60bd334f683d2f82 365 SUPERFAMILY SSF52821 17 70 3.67E-23 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS04245 06ddf5b35ea4d45f60bd334f683d2f82 365 SUPERFAMILY SSF52821 97 159 3.67E-23 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS04245 06ddf5b35ea4d45f60bd334f683d2f82 365 Gene3D G3DSA:3.40.50.300 134 156 8.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04245 06ddf5b35ea4d45f60bd334f683d2f82 365 PANTHER PTHR30401:SF0 23 263 7.1E-66 T 22-04-2016 PNUC_RS04245 06ddf5b35ea4d45f60bd334f683d2f82 365 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 21 325 1.5E-108 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 PNUC_RS04245 06ddf5b35ea4d45f60bd334f683d2f82 365 Gene3D G3DSA:3.40.250.10 22 133 5.8E-34 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS04245 06ddf5b35ea4d45f60bd334f683d2f82 365 Pfam PF00581 Rhodanese-like domain 17 133 4.0E-9 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 PIRSF PIRSF001365 1 290 6.3E-88 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 PANTHER PTHR12128:SF34 1 290 2.2E-126 T 22-04-2016 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 PANTHER PTHR12128 1 290 2.2E-126 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 98 114 2.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 30 51 2.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 123 140 2.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 66 84 2.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 Pfam PF00701 Dihydrodipicolinate synthetase family 1 287 1.5E-93 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 2 286 2.9E-107 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 Gene3D G3DSA:3.20.20.70 1 290 4.7E-113 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 128 158 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 SMART SM01130 1 288 1.3E-134 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 SUPERFAMILY SSF51569 1 288 2.93E-99 T 22-04-2016 PNUC_RS04410 5a2f4707eae54857f49cc218c3912bc2 290 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 286 65.079 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS02690 bfdf40a4f95abc1f2ddcb423cac60891 176 Pfam PF03724 META domain 49 168 2.2E-26 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ PNUC_RS02690 bfdf40a4f95abc1f2ddcb423cac60891 176 PANTHER PTHR35535 79 172 1.1E-15 T 22-04-2016 PNUC_RS02690 bfdf40a4f95abc1f2ddcb423cac60891 176 PANTHER PTHR35535:SF1 79 172 1.1E-15 T 22-04-2016 PNUC_RS07425 b77cfbdd8f5b55b6ce925f348f7a619f 217 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 217 32.136 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 PNUC_RS07425 b77cfbdd8f5b55b6ce925f348f7a619f 217 PANTHER PTHR11228 1 210 2.8E-27 T 22-04-2016 PNUC_RS07425 b77cfbdd8f5b55b6ce925f348f7a619f 217 PANTHER PTHR11228:SF6 1 210 2.8E-27 T 22-04-2016 PNUC_RS07425 b77cfbdd8f5b55b6ce925f348f7a619f 217 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 2 217 2.6E-98 T 22-04-2016 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 PNUC_RS07425 b77cfbdd8f5b55b6ce925f348f7a619f 217 PIRSF PIRSF000370 1 217 1.6E-35 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 PNUC_RS07425 b77cfbdd8f5b55b6ce925f348f7a619f 217 Pfam PF13394 4Fe-4S single cluster domain 24 125 6.1E-7 T 22-04-2016 PNUC_RS07425 b77cfbdd8f5b55b6ce925f348f7a619f 217 SUPERFAMILY SSF102114 45 139 7.65E-9 T 22-04-2016 PNUC_RS07425 b77cfbdd8f5b55b6ce925f348f7a619f 217 Gene3D G3DSA:3.20.20.70 45 139 2.2E-8 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS00815 786f5e388803698547e6dddabe781b41 124 Gene3D G3DSA:2.60.40.1470 4 124 1.7E-45 T 22-04-2016 IPR007474 ApaG domain PNUC_RS00815 786f5e388803698547e6dddabe781b41 124 Pfam PF04379 Protein of unknown function (DUF525) 17 101 1.2E-33 T 22-04-2016 IPR007474 ApaG domain PNUC_RS00815 786f5e388803698547e6dddabe781b41 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 30.131 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG PNUC_RS00815 786f5e388803698547e6dddabe781b41 124 PANTHER PTHR14289 6 121 1.1E-41 T 22-04-2016 PNUC_RS00815 786f5e388803698547e6dddabe781b41 124 SUPERFAMILY SSF110069 4 124 8.11E-47 T 22-04-2016 IPR007474 ApaG domain PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 SUPERFAMILY SSF56719 758 822 4.18E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 SUPERFAMILY SSF56719 420 586 4.18E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 Gene3D G3DSA:3.30.565.10 11 238 4.7E-89 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 SMART SM00387 37 197 4.7E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 Gene3D G3DSA:3.40.50.670 430 576 3.9E-98 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 Gene3D G3DSA:3.40.50.670 746 814 3.9E-98 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 8 832 96.494 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 764 821 3.5E-28 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 Pfam PF00204 DNA gyrase B 242 416 9.9E-56 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 Pfam PF01751 Toprim domain 445 557 2.9E-19 T 22-04-2016 IPR006171 Toprim domain PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 Gene3D G3DSA:3.30.230.10 241 418 1.8E-70 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 11 832 4.4E-285 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR01159 DNA gyrase subunit B signature 338 354 1.3E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR01159 DNA gyrase subunit B signature 241 263 1.3E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR01159 DNA gyrase subunit B signature 268 286 1.3E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR01159 DNA gyrase subunit B signature 386 400 1.3E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR01159 DNA gyrase subunit B signature 400 420 1.3E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR01159 DNA gyrase subunit B signature 801 817 1.3E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR01159 DNA gyrase subunit B signature 217 230 1.3E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR01159 DNA gyrase subunit B signature 496 505 1.3E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR01159 DNA gyrase subunit B signature 202 217 1.3E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR01159 DNA gyrase subunit B signature 11 21 1.3E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR01159 DNA gyrase subunit B signature 785 797 1.3E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 38 195 4.4E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 SMART SM00433 41 825 1.8E-241 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 ProSitePatterns PS00177 DNA topoisomerase II signature. 448 456 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR00418 DNA topoisomerase II family signature 123 137 7.1E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR00418 DNA topoisomerase II family signature 41 56 7.1E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR00418 DNA topoisomerase II family signature 531 548 7.1E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR00418 DNA topoisomerase II family signature 513 529 7.1E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR00418 DNA topoisomerase II family signature 551 563 7.1E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR00418 DNA topoisomerase II family signature 446 460 7.1E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR00418 DNA topoisomerase II family signature 764 780 7.1E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR00418 DNA topoisomerase II family signature 294 307 7.1E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PRINTS PR00418 DNA topoisomerase II family signature 76 89 7.1E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 SUPERFAMILY SSF54211 242 418 1.33E-54 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PANTHER PTHR10169 752 832 2.8E-276 T 22-04-2016 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 PANTHER PTHR10169 9 579 2.8E-276 T 22-04-2016 PNUC_RS00015 4c57c36ab6abd3dec9ee538f0cbce2d1 832 SUPERFAMILY SSF55874 11 237 2.51E-62 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 SUPERFAMILY SSF52540 38 269 4.01E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 271 344 1.7E-33 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 PANTHER PTHR13779:SF25 16 348 1.5E-182 T 22-04-2016 PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 Gene3D G3DSA:1.10.10.10 275 345 2.0E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 SMART SM00382 69 196 2.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 Gene3D G3DSA:3.40.50.300 38 194 1.5E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 22 253 1.1E-116 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 PANTHER PTHR13779 16 348 1.5E-182 T 22-04-2016 PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 268 349 4.0E-35 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 356 179.879 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 41 344 5.1E-146 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 SUPERFAMILY SSF46785 275 348 2.04E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS09750 80eaad9dbec422082eb6cf91541fa126 356 Gene3D G3DSA:1.10.8.60 201 272 1.8E-33 T 22-04-2016 PNUC_RS07670 d4cc66068e9ddc1dbad546e76a0011e9 278 SUPERFAMILY SSF51556 2 261 4.75E-72 T 22-04-2016 IPR032466 Metal-dependent hydrolase PNUC_RS07670 d4cc66068e9ddc1dbad546e76a0011e9 278 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 195 211 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PNUC_RS07670 d4cc66068e9ddc1dbad546e76a0011e9 278 PIRSF PIRSF005902 1 264 1.8E-62 T 22-04-2016 IPR001130 TatD family GO:0016788 PNUC_RS07670 d4cc66068e9ddc1dbad546e76a0011e9 278 Pfam PF01026 TatD related DNase 3 260 2.4E-61 T 22-04-2016 IPR001130 TatD family GO:0016788 PNUC_RS07670 d4cc66068e9ddc1dbad546e76a0011e9 278 Gene3D G3DSA:3.20.20.140 1 261 1.2E-71 T 22-04-2016 PNUC_RS07670 d4cc66068e9ddc1dbad546e76a0011e9 278 PANTHER PTHR10060 1 265 6.6E-76 T 22-04-2016 IPR001130 TatD family GO:0016788 PNUC_RS01385 180e319ee18c8dd3d89df29de6151724 271 SUPERFAMILY SSF53335 223 270 5.43E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01385 180e319ee18c8dd3d89df29de6151724 271 SUPERFAMILY SSF53335 14 185 5.43E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01385 180e319ee18c8dd3d89df29de6151724 271 PANTHER PTHR23417 15 214 1.9E-56 T 22-04-2016 PNUC_RS01385 180e319ee18c8dd3d89df29de6151724 271 Gene3D G3DSA:3.40.50.150 27 232 1.4E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01385 180e319ee18c8dd3d89df29de6151724 271 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 21 271 28.513 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 PNUC_RS01385 180e319ee18c8dd3d89df29de6151724 271 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 57 203 8.2E-45 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 PNUC_RS01385 180e319ee18c8dd3d89df29de6151724 271 PANTHER PTHR23417:SF14 15 214 1.9E-56 T 22-04-2016 PNUC_RS01385 180e319ee18c8dd3d89df29de6151724 271 Pfam PF02390 Putative methyltransferase 62 208 4.2E-49 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 SUPERFAMILY SSF82866 291 489 2.35E-37 T 22-04-2016 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 Gene3D G3DSA:1.20.1640.10 287 497 1.2E-50 T 22-04-2016 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 Gene3D G3DSA:3.30.2090.10 707 794 1.7E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 Gene3D G3DSA:3.30.2090.10 183 265 1.1E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 SUPERFAMILY SSF82714 708 793 3.4E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 SUPERFAMILY SSF82866 791 1019 5.1E-48 T 22-04-2016 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 PANTHER PTHR32063:SF24 5 1017 0.0 T 22-04-2016 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 Gene3D G3DSA:3.30.70.1430 45 141 1.4E-18 T 22-04-2016 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 SUPERFAMILY SSF82693 45 127 1.92E-15 T 22-04-2016 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 Pfam PF00873 AcrB/AcrD/AcrF family 11 1014 1.8E-248 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 8 1020 1.4E-269 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 SUPERFAMILY SSF82693 139 182 1.12E-12 T 22-04-2016 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 SUPERFAMILY SSF82693 268 325 1.12E-12 T 22-04-2016 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 Gene3D G3DSA:1.10.3850.10 799 1015 2.2E-51 T 22-04-2016 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 PANTHER PTHR32063 5 1017 0.0 T 22-04-2016 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 SUPERFAMILY SSF82714 183 265 1.44E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 2.9E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 2.9E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 2.9E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.9E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 PRINTS PR00702 Acriflavin resistance protein family signature 537 554 2.9E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 2.9E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS06815 22adbfdc84ab04a2c538139e27fb99c9 1025 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 2.9E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PNUC_RS06070 052ebcdf712760c0425812b0a844e886 261 Gene3D G3DSA:1.10.780.10 48 96 4.8E-4 T 22-04-2016 PNUC_RS06070 052ebcdf712760c0425812b0a844e886 261 PIRSF PIRSF038455 2 261 5.9E-84 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 PNUC_RS06070 052ebcdf712760c0425812b0a844e886 261 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 55 260 1.1E-68 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 PNUC_RS06070 052ebcdf712760c0425812b0a844e886 261 SUPERFAMILY SSF46626 160 261 6.59E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS06070 052ebcdf712760c0425812b0a844e886 261 Gene3D G3DSA:1.10.760.10 97 260 2.5E-47 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS06070 052ebcdf712760c0425812b0a844e886 261 SUPERFAMILY SSF46626 35 147 4.08E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS07795 52d2adb7d72a23d6e846c483a250f8cc 107 Gene3D G3DSA:2.60.300.12 2 96 2.7E-36 T 22-04-2016 IPR000361 FeS cluster biogenesis PNUC_RS07795 52d2adb7d72a23d6e846c483a250f8cc 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site PNUC_RS07795 52d2adb7d72a23d6e846c483a250f8cc 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 2.9E-27 T 22-04-2016 IPR000361 FeS cluster biogenesis PNUC_RS07795 52d2adb7d72a23d6e846c483a250f8cc 107 PANTHER PTHR10072 1 107 3.0E-52 T 22-04-2016 PNUC_RS07795 52d2adb7d72a23d6e846c483a250f8cc 107 SUPERFAMILY SSF89360 1 96 1.7E-33 T 22-04-2016 IPR000361 FeS cluster biogenesis PNUC_RS07795 52d2adb7d72a23d6e846c483a250f8cc 107 PANTHER PTHR10072:SF48 1 107 3.0E-52 T 22-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 PNUC_RS07795 52d2adb7d72a23d6e846c483a250f8cc 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.1E-54 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 PNUC_RS07795 52d2adb7d72a23d6e846c483a250f8cc 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 3.0E-38 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 PNUC_RS04740 58cf6e7b35662202a934854a8cfe012e 739 PANTHER PTHR23408 24 713 0.0 T 22-04-2016 PNUC_RS04740 58cf6e7b35662202a934854a8cfe012e 739 Pfam PF02310 B12 binding domain 609 718 1.6E-16 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PNUC_RS04740 58cf6e7b35662202a934854a8cfe012e 739 PANTHER PTHR23408:SF1 24 713 0.0 T 22-04-2016 PNUC_RS04740 58cf6e7b35662202a934854a8cfe012e 739 Gene3D G3DSA:3.20.20.240 53 520 4.9E-209 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 PNUC_RS04740 58cf6e7b35662202a934854a8cfe012e 739 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 53 574 5.0E-268 T 22-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 PNUC_RS04740 58cf6e7b35662202a934854a8cfe012e 739 Pfam PF01642 Methylmalonyl-CoA mutase 55 567 3.6E-238 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 PNUC_RS04740 58cf6e7b35662202a934854a8cfe012e 739 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 606 736 9.7E-61 T 22-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 PNUC_RS04740 58cf6e7b35662202a934854a8cfe012e 739 SUPERFAMILY SSF52242 574 735 6.41E-56 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PNUC_RS04740 58cf6e7b35662202a934854a8cfe012e 739 Gene3D G3DSA:3.40.50.280 574 734 1.5E-68 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PNUC_RS04740 58cf6e7b35662202a934854a8cfe012e 739 SUPERFAMILY SSF51703 25 569 4.45E-224 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 PNUC_RS00180 21cc02a03abac5dd12dfcd3588237c61 200 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 8 198 37.435 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 PNUC_RS00180 21cc02a03abac5dd12dfcd3588237c61 200 PANTHER PTHR30390 9 199 1.7E-82 T 22-04-2016 PNUC_RS00180 21cc02a03abac5dd12dfcd3588237c61 200 PANTHER PTHR30390:SF5 9 199 1.7E-82 T 22-04-2016 PNUC_RS00180 21cc02a03abac5dd12dfcd3588237c61 200 Gene3D G3DSA:3.40.50.10490 10 197 1.3E-60 T 22-04-2016 PNUC_RS00180 21cc02a03abac5dd12dfcd3588237c61 200 Pfam PF13580 SIS domain 24 152 6.3E-34 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PNUC_RS00180 21cc02a03abac5dd12dfcd3588237c61 200 SUPERFAMILY SSF53697 12 197 8.29E-56 T 22-04-2016 PNUC_RS10775 7db8cff1abe3c1234a984f340faf07ca 229 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 10 222 6.3E-71 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 PNUC_RS10775 7db8cff1abe3c1234a984f340faf07ca 229 Gene3D G3DSA:3.40.50.450 46 209 5.9E-12 T 22-04-2016 PNUC_RS10775 7db8cff1abe3c1234a984f340faf07ca 229 PANTHER PTHR32039:SF8 10 222 7.4E-86 T 22-04-2016 PNUC_RS10775 7db8cff1abe3c1234a984f340faf07ca 229 SUPERFAMILY SSF102405 15 222 1.98E-42 T 22-04-2016 PNUC_RS10775 7db8cff1abe3c1234a984f340faf07ca 229 PANTHER PTHR32039 10 222 7.4E-86 T 22-04-2016 PNUC_RS10775 7db8cff1abe3c1234a984f340faf07ca 229 Pfam PF02481 DNA recombination-mediator protein A 9 212 7.2E-74 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 PNUC_RS09220 5c58af81fd1ab6f513ec4f6c89dbdd4e 937 Gene3D G3DSA:3.30.460.10 92 271 7.6E-55 T 22-04-2016 PNUC_RS09220 5c58af81fd1ab6f513ec4f6c89dbdd4e 937 Gene3D G3DSA:3.30.460.10 630 796 2.6E-48 T 22-04-2016 PNUC_RS09220 5c58af81fd1ab6f513ec4f6c89dbdd4e 937 SUPERFAMILY SSF81301 506 800 1.39E-63 T 22-04-2016 PNUC_RS09220 5c58af81fd1ab6f513ec4f6c89dbdd4e 937 SUPERFAMILY SSF81301 5 272 1.06E-69 T 22-04-2016 PNUC_RS09220 5c58af81fd1ab6f513ec4f6c89dbdd4e 937 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 57 245 1.5E-60 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PNUC_RS09220 5c58af81fd1ab6f513ec4f6c89dbdd4e 937 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 537 790 4.9E-53 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PNUC_RS09220 5c58af81fd1ab6f513ec4f6c89dbdd4e 937 Pfam PF08335 GlnD PII-uridylyltransferase 812 900 7.0E-8 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PNUC_RS09220 5c58af81fd1ab6f513ec4f6c89dbdd4e 937 Pfam PF08335 GlnD PII-uridylyltransferase 283 431 2.4E-46 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PNUC_RS09220 5c58af81fd1ab6f513ec4f6c89dbdd4e 937 PANTHER PTHR30621 15 937 3.5E-215 T 22-04-2016 PNUC_RS09220 5c58af81fd1ab6f513ec4f6c89dbdd4e 937 SUPERFAMILY SSF81593 274 431 7.61E-39 T 22-04-2016 PNUC_RS09220 5c58af81fd1ab6f513ec4f6c89dbdd4e 937 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 3 933 17.614 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 PNUC_RS09220 5c58af81fd1ab6f513ec4f6c89dbdd4e 937 SUPERFAMILY SSF81593 800 931 6.75E-28 T 22-04-2016 PNUC_RS08610 81c896b5bfc7c5102e1c6aadc2f0ae70 133 SMART SM00905 7 118 2.1E-4 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PNUC_RS08610 81c896b5bfc7c5102e1c6aadc2f0ae70 133 SUPERFAMILY SSF55620 6 116 4.11E-12 T 22-04-2016 PNUC_RS08610 81c896b5bfc7c5102e1c6aadc2f0ae70 133 Gene3D G3DSA:3.30.1130.10 6 116 1.3E-13 T 22-04-2016 PNUC_RS08610 81c896b5bfc7c5102e1c6aadc2f0ae70 133 Pfam PF02152 Dihydroneopterin aldolase 7 113 1.1E-13 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PNUC_RS09680 953eb89ccea62ff72e63e27d708563ac 244 Gene3D G3DSA:3.40.1130.10 72 234 1.6E-21 T 22-04-2016 PNUC_RS09680 953eb89ccea62ff72e63e27d708563ac 244 Pfam PF01553 Acyltransferase 60 187 8.4E-22 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PNUC_RS09680 953eb89ccea62ff72e63e27d708563ac 244 SUPERFAMILY SSF69593 8 242 9.15E-40 T 22-04-2016 PNUC_RS09680 953eb89ccea62ff72e63e27d708563ac 244 PANTHER PTHR10434 4 236 1.2E-44 T 22-04-2016 PNUC_RS09680 953eb89ccea62ff72e63e27d708563ac 244 SMART SM00563 75 190 2.0E-28 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PNUC_RS01110 4b20a8088c8983184b7d50e37b48ba05 319 Pfam PF00294 pfkB family carbohydrate kinase 34 299 7.2E-42 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB PNUC_RS01110 4b20a8088c8983184b7d50e37b48ba05 319 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PNUC_RS01110 4b20a8088c8983184b7d50e37b48ba05 319 Gene3D G3DSA:3.40.1190.20 4 312 2.4E-55 T 22-04-2016 IPR029056 Ribokinase-like PNUC_RS01110 4b20a8088c8983184b7d50e37b48ba05 319 SUPERFAMILY SSF53613 4 303 6.24E-63 T 22-04-2016 IPR029056 Ribokinase-like PNUC_RS01110 4b20a8088c8983184b7d50e37b48ba05 319 PANTHER PTHR10584:SF15 1 311 6.0E-102 T 22-04-2016 PNUC_RS01110 4b20a8088c8983184b7d50e37b48ba05 319 PANTHER PTHR10584 1 311 6.0E-102 T 22-04-2016 PNUC_RS10570 55e8b5bde16a377b49ac4bad2286cc0f 320 Pfam PF00561 alpha/beta hydrolase fold 56 152 1.9E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS10570 55e8b5bde16a377b49ac4bad2286cc0f 320 SUPERFAMILY SSF53474 33 318 2.75E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS10570 55e8b5bde16a377b49ac4bad2286cc0f 320 PANTHER PTHR10992 99 314 3.6E-15 T 22-04-2016 PNUC_RS10570 55e8b5bde16a377b49ac4bad2286cc0f 320 PANTHER PTHR10992 57 83 3.6E-15 T 22-04-2016 PNUC_RS10570 55e8b5bde16a377b49ac4bad2286cc0f 320 Gene3D G3DSA:3.40.50.1820 12 314 2.7E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS05425 e78fbe1e2799305805a48d8d2b22549c 488 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 482 3.2E-186 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 PNUC_RS05425 e78fbe1e2799305805a48d8d2b22549c 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 8.0E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PNUC_RS05425 e78fbe1e2799305805a48d8d2b22549c 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 8.0E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PNUC_RS05425 e78fbe1e2799305805a48d8d2b22549c 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 8.0E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PNUC_RS05425 e78fbe1e2799305805a48d8d2b22549c 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 8.0E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PNUC_RS05425 e78fbe1e2799305805a48d8d2b22549c 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 8.0E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PNUC_RS05425 e78fbe1e2799305805a48d8d2b22549c 488 PANTHER PTHR22773 1 483 4.4E-202 T 22-04-2016 PNUC_RS05425 e78fbe1e2799305805a48d8d2b22549c 488 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 60 122 6.8E-5 T 22-04-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 PNUC_RS05425 e78fbe1e2799305805a48d8d2b22549c 488 Pfam PF00361 Proton-conducting membrane transporter 129 413 1.7E-77 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PNUC_RS05425 e78fbe1e2799305805a48d8d2b22549c 488 PANTHER PTHR22773:SF40 1 483 4.4E-202 T 22-04-2016 PNUC_RS06275 8f07ab7dab307052f0edbb92664e596e 112 Pfam PF00699 Urease beta subunit 14 110 1.4E-43 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06275 8f07ab7dab307052f0edbb92664e596e 112 PANTHER PTHR33569 13 110 7.8E-56 T 22-04-2016 PNUC_RS06275 8f07ab7dab307052f0edbb92664e596e 112 Hamap MF_01954 Urease subunit beta [ureB]. 12 112 30.168 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06275 8f07ab7dab307052f0edbb92664e596e 112 PANTHER PTHR33569:SF1 13 110 7.8E-56 T 22-04-2016 PNUC_RS06275 8f07ab7dab307052f0edbb92664e596e 112 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 13 109 4.2E-46 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06275 8f07ab7dab307052f0edbb92664e596e 112 Gene3D G3DSA:2.10.150.10 13 111 1.9E-47 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS06275 8f07ab7dab307052f0edbb92664e596e 112 SUPERFAMILY SSF51278 12 112 1.31E-44 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PNUC_RS04645 8fe4e3535f789c89ba46596192ab5edb 308 Pfam PF02581 Thiamine monophosphate synthase/TENI 121 289 5.2E-49 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PNUC_RS04645 8fe4e3535f789c89ba46596192ab5edb 308 Gene3D G3DSA:3.20.20.70 101 307 1.5E-57 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS04645 8fe4e3535f789c89ba46596192ab5edb 308 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 123 302 4.3E-44 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PNUC_RS04645 8fe4e3535f789c89ba46596192ab5edb 308 SUPERFAMILY SSF51391 108 306 9.42E-56 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PNUC_RS04645 8fe4e3535f789c89ba46596192ab5edb 308 PANTHER PTHR20857 102 308 3.0E-50 T 22-04-2016 PNUC_RS04645 8fe4e3535f789c89ba46596192ab5edb 308 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 110 307 18.822 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 Gene3D G3DSA:3.50.50.60 151 346 1.3E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 5.0E-38 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 291 5.0E-38 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 305 327 5.0E-38 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.0E-38 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 187 205 5.0E-38 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 359 467 6.0E-39 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PANTHER PTHR22912 1 129 5.9E-222 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PANTHER PTHR22912 146 471 5.9E-222 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 340 1.0E-69 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 Gene3D G3DSA:3.30.390.30 347 474 4.3E-51 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 Gene3D G3DSA:3.50.50.60 3 150 9.6E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 SUPERFAMILY SSF51905 2 350 5.7E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.9E-79 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 160 4.9E-79 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 4.9E-79 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 355 376 4.9E-79 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 187 212 4.9E-79 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 290 4.9E-79 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 435 4.9E-79 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 462 4.9E-79 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 320 327 4.9E-79 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 478 1.6E-164 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PIRSF PIRSF000350 1 474 1.4E-85 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 48 58 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 SUPERFAMILY SSF55424 355 476 4.98E-43 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PANTHER PTHR22912:SF131 1 129 5.9E-222 T 22-04-2016 PNUC_RS04385 ecf33d4a92ab7b674b5cfaf945867dae 478 PANTHER PTHR22912:SF131 146 471 5.9E-222 T 22-04-2016 PNUC_RS07570 f415e6dbbb36c00e63a3882588a4a10b 257 Gene3D G3DSA:3.40.1180.10 13 249 7.5E-95 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PNUC_RS07570 f415e6dbbb36c00e63a3882588a4a10b 257 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 17 242 4.3E-87 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PNUC_RS07570 f415e6dbbb36c00e63a3882588a4a10b 257 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 PNUC_RS07570 f415e6dbbb36c00e63a3882588a4a10b 257 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 17 243 39.564 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PNUC_RS07570 f415e6dbbb36c00e63a3882588a4a10b 257 PANTHER PTHR10291 11 255 1.8E-114 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PNUC_RS07570 f415e6dbbb36c00e63a3882588a4a10b 257 SUPERFAMILY SSF64005 14 238 3.53E-84 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PNUC_RS07570 f415e6dbbb36c00e63a3882588a4a10b 257 Pfam PF01255 Putative undecaprenyl diphosphate synthase 24 242 1.6E-77 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PNUC_RS08200 8472973c76db2f0fa6059256aacfc006 208 PANTHER PTHR30462:SF3 4 198 8.9E-26 T 22-04-2016 PNUC_RS08200 8472973c76db2f0fa6059256aacfc006 208 Pfam PF04403 Paraquat-inducible protein A 47 198 2.9E-45 T 22-04-2016 IPR007498 Paraquat-inducible protein A PNUC_RS08200 8472973c76db2f0fa6059256aacfc006 208 PANTHER PTHR30462 4 198 8.9E-26 T 22-04-2016 PNUC_RS04820 1908d839f570e788f800c2e444ed1885 452 PANTHER PTHR11918:SF57 4 451 2.5E-202 T 22-04-2016 PNUC_RS04820 1908d839f570e788f800c2e444ed1885 452 Pfam PF04055 Radical SAM superfamily 145 331 6.9E-29 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PNUC_RS04820 1908d839f570e788f800c2e444ed1885 452 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 4 449 9.2E-160 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PNUC_RS04820 1908d839f570e788f800c2e444ed1885 452 Gene3D G3DSA:2.40.50.140 388 451 2.2E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS04820 1908d839f570e788f800c2e444ed1885 452 PANTHER PTHR11918 4 451 2.5E-202 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein PNUC_RS04820 1908d839f570e788f800c2e444ed1885 452 Gene3D G3DSA:3.80.30.20 137 384 7.2E-67 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PNUC_RS04820 1908d839f570e788f800c2e444ed1885 452 SUPERFAMILY SSF102114 113 381 1.16E-49 T 22-04-2016 PNUC_RS04820 1908d839f570e788f800c2e444ed1885 452 SMART SM00729 139 373 3.0E-50 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PNUC_RS04820 1908d839f570e788f800c2e444ed1885 452 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 143 163 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PNUC_RS04820 1908d839f570e788f800c2e444ed1885 452 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 449 1.8E-95 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 PNUC_RS04820 1908d839f570e788f800c2e444ed1885 452 Pfam PF00919 Uncharacterized protein family UPF0004 4 84 2.3E-19 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 PNUC_RS04820 1908d839f570e788f800c2e444ed1885 452 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 3 452 58.419 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PNUC_RS06190 a4f813f06924d7237267cfb73ac2554e 347 PANTHER PTHR11082 1 241 1.9E-107 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PNUC_RS06190 a4f813f06924d7237267cfb73ac2554e 347 Pfam PF01207 Dihydrouridine synthase (Dus) 1 321 1.1E-63 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PNUC_RS06190 a4f813f06924d7237267cfb73ac2554e 347 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 77 95 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PNUC_RS06190 a4f813f06924d7237267cfb73ac2554e 347 SUPERFAMILY SSF51395 1 318 3.66E-54 T 22-04-2016 PNUC_RS06190 a4f813f06924d7237267cfb73ac2554e 347 PANTHER PTHR11082:SF29 1 241 1.9E-107 T 22-04-2016 PNUC_RS06190 a4f813f06924d7237267cfb73ac2554e 347 Gene3D G3DSA:3.20.20.70 1 244 6.9E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS04775 3e2867875538fc1ba91c1452dd6e576f 179 Gene3D G3DSA:3.40.470.10 107 178 1.0E-4 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PNUC_RS08240 819aa5dee64ccd1ab57d222db169bc03 109 SUPERFAMILY SSF46785 4 93 2.82E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08240 819aa5dee64ccd1ab57d222db169bc03 109 PANTHER PTHR33154:SF5 1 101 1.4E-21 T 22-04-2016 PNUC_RS08240 819aa5dee64ccd1ab57d222db169bc03 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.3E-5 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PNUC_RS08240 819aa5dee64ccd1ab57d222db169bc03 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.3E-5 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PNUC_RS08240 819aa5dee64ccd1ab57d222db169bc03 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.3E-5 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PNUC_RS08240 819aa5dee64ccd1ab57d222db169bc03 109 SMART SM00418 8 85 5.8E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PNUC_RS08240 819aa5dee64ccd1ab57d222db169bc03 109 PANTHER PTHR33154 1 101 1.4E-21 T 22-04-2016 PNUC_RS08240 819aa5dee64ccd1ab57d222db169bc03 109 Gene3D G3DSA:1.10.10.10 2 95 1.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08240 819aa5dee64ccd1ab57d222db169bc03 109 Pfam PF12840 Helix-turn-helix domain 11 69 1.8E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS04020 2545dfa49f58a07aa683df88834ea74f 224 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 11 218 36.511 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 PNUC_RS04020 2545dfa49f58a07aa683df88834ea74f 224 Gene3D G3DSA:3.20.20.70 10 217 3.7E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS04020 2545dfa49f58a07aa683df88834ea74f 224 PANTHER PTHR22854 10 216 7.0E-53 T 22-04-2016 PNUC_RS04020 2545dfa49f58a07aa683df88834ea74f 224 PANTHER PTHR22854:SF6 10 216 7.0E-53 T 22-04-2016 PNUC_RS04020 2545dfa49f58a07aa683df88834ea74f 224 SUPERFAMILY SSF51366 11 216 1.57E-53 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PNUC_RS04020 2545dfa49f58a07aa683df88834ea74f 224 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 13 213 1.9E-38 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 PNUC_RS09725 4c55c5137240da1c616d71b1b7366a59 338 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 325 2.4E-125 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 PNUC_RS09725 4c55c5137240da1c616d71b1b7366a59 338 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PNUC_RS09725 4c55c5137240da1c616d71b1b7366a59 338 PIRSF PIRSF006621 1 332 3.1E-108 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PNUC_RS09725 4c55c5137240da1c616d71b1b7366a59 338 SUPERFAMILY SSF51395 10 325 7.32E-89 T 22-04-2016 PNUC_RS09725 4c55c5137240da1c616d71b1b7366a59 338 PANTHER PTHR11082:SF25 1 331 1.5E-135 T 22-04-2016 PNUC_RS09725 4c55c5137240da1c616d71b1b7366a59 338 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 326 49.601 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 PNUC_RS09725 4c55c5137240da1c616d71b1b7366a59 338 PANTHER PTHR11082 1 331 1.5E-135 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PNUC_RS09725 4c55c5137240da1c616d71b1b7366a59 338 Gene3D G3DSA:1.10.1200.80 257 331 6.3E-23 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 PNUC_RS09725 4c55c5137240da1c616d71b1b7366a59 338 Pfam PF01207 Dihydrouridine synthase (Dus) 14 322 1.5E-106 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PNUC_RS09725 4c55c5137240da1c616d71b1b7366a59 338 Gene3D G3DSA:3.20.20.70 7 248 1.5E-84 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS02065 e9da8cdb25040c3084950a9df5912cb0 201 PANTHER PTHR11746:SF102 124 191 7.3E-22 T 22-04-2016 PNUC_RS02065 e9da8cdb25040c3084950a9df5912cb0 201 PANTHER PTHR11746 124 191 7.3E-22 T 22-04-2016 PNUC_RS02065 e9da8cdb25040c3084950a9df5912cb0 201 Pfam PF02545 Maf-like protein 8 189 4.6E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 PNUC_RS02065 e9da8cdb25040c3084950a9df5912cb0 201 Hamap MF_00528 Septum formation protein Maf [maf]. 8 194 27.477 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 PNUC_RS02065 e9da8cdb25040c3084950a9df5912cb0 201 TIGRFAM TIGR00172 maf: septum formation protein Maf 8 188 7.8E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 PNUC_RS02065 e9da8cdb25040c3084950a9df5912cb0 201 SUPERFAMILY SSF52972 6 189 1.5E-55 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PNUC_RS02065 e9da8cdb25040c3084950a9df5912cb0 201 PIRSF PIRSF006305 1 195 2.6E-44 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 PNUC_RS02065 e9da8cdb25040c3084950a9df5912cb0 201 Gene3D G3DSA:3.90.950.10 7 192 2.0E-53 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PNUC_RS01265 3334164c89135bfb8abc47d20cc1413a 56 Pfam PF00301 Rubredoxin 6 51 2.7E-22 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 PNUC_RS01265 3334164c89135bfb8abc47d20cc1413a 56 Gene3D G3DSA:2.20.28.10 2 54 5.2E-25 T 22-04-2016 IPR004039 Rubredoxin-type fold PNUC_RS01265 3334164c89135bfb8abc47d20cc1413a 56 PIRSF PIRSF000071 2 56 1.3E-25 T 22-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 PNUC_RS01265 3334164c89135bfb8abc47d20cc1413a 56 ProSitePatterns PS00202 Rubredoxin signature. 35 45 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 PNUC_RS01265 3334164c89135bfb8abc47d20cc1413a 56 SUPERFAMILY SSF57802 2 54 1.55E-22 T 22-04-2016 PNUC_RS01265 3334164c89135bfb8abc47d20cc1413a 56 PRINTS PR00163 Rubredoxin signature 5 21 1.4E-8 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 PNUC_RS01265 3334164c89135bfb8abc47d20cc1413a 56 PRINTS PR00163 Rubredoxin signature 35 51 1.4E-8 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 Gene3D G3DSA:2.20.25.90 76 130 6.0E-16 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 Gene3D G3DSA:3.40.228.10 209 392 1.1E-62 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 35 64 1.6E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 Gene3D G3DSA:2.40.40.20 676 709 2.2E-52 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 Gene3D G3DSA:2.40.40.20 852 990 2.2E-52 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 Gene3D G3DSA:2.40.40.20 804 815 2.2E-52 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 Gene3D G3DSA:3.40.50.740 134 208 7.6E-78 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 Gene3D G3DSA:3.40.50.740 393 647 7.6E-78 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 78 128 4.4E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 Pfam PF01568 Molydopterin dinucleotide binding domain 858 984 1.9E-19 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 PANTHER PTHR11615:SF140 416 519 1.4E-279 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 PANTHER PTHR11615:SF140 767 990 1.4E-279 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 PANTHER PTHR11615:SF140 26 398 1.4E-279 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 PANTHER PTHR11615:SF140 535 627 1.4E-279 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 PANTHER PTHR11615 416 519 1.4E-279 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 PANTHER PTHR11615 767 990 1.4E-279 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 PANTHER PTHR11615 26 398 1.4E-279 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 PANTHER PTHR11615 535 627 1.4E-279 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 Pfam PF00384 Molybdopterin oxidoreductase 134 588 4.3E-56 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 SUPERFAMILY SSF50692 823 990 1.92E-40 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 SMART SM00926 77 131 1.4E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 SUPERFAMILY SSF53706 76 645 8.51E-195 T 22-04-2016 PNUC_RS07320 1161ac74ba53b976d376a6a7bbd98c8c 992 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 82 99 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PNUC_RS05585 f155e002927ae0fb95a0069b3b815868 312 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 35 308 2.5E-71 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS05585 f155e002927ae0fb95a0069b3b815868 312 SUPERFAMILY SSF53850 103 275 1.74E-6 T 22-04-2016 PNUC_RS05585 f155e002927ae0fb95a0069b3b815868 312 PANTHER PTHR30349 1 274 9.2E-81 T 22-04-2016 PNUC_RS05585 f155e002927ae0fb95a0069b3b815868 312 PANTHER PTHR30349:SF1 1 274 9.2E-81 T 22-04-2016 PNUC_RS05585 f155e002927ae0fb95a0069b3b815868 312 PIRSF PIRSF017082 1 311 2.8E-78 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS02730 6f051e7bec583dc9b68cab02b15bccde 417 Pfam PF01435 Peptidase family M48 207 414 2.4E-37 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PNUC_RS02730 6f051e7bec583dc9b68cab02b15bccde 417 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 25 203 2.9E-56 T 22-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 PNUC_RS02730 6f051e7bec583dc9b68cab02b15bccde 417 PANTHER PTHR10120:SF24 1 417 6.0E-119 T 22-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 PNUC_RS02730 6f051e7bec583dc9b68cab02b15bccde 417 Gene3D G3DSA:3.30.2010.10 200 292 8.4E-19 T 22-04-2016 PNUC_RS02730 6f051e7bec583dc9b68cab02b15bccde 417 PANTHER PTHR10120 1 417 6.0E-119 T 22-04-2016 PNUC_RS10305 ee7953b9f1183e219d2f7e47f7ebc1f4 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 4.0E-237 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 PNUC_RS10305 ee7953b9f1183e219d2f7e47f7ebc1f4 610 PANTHER PTHR10937:SF0 1 610 1.2E-295 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 PNUC_RS10305 ee7953b9f1183e219d2f7e47f7ebc1f4 610 Gene3D G3DSA:3.60.20.10 2 237 3.5E-69 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS10305 ee7953b9f1183e219d2f7e47f7ebc1f4 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 38.004 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 PNUC_RS10305 ee7953b9f1183e219d2f7e47f7ebc1f4 610 Pfam PF13522 Glutamine amidotransferase domain 68 196 3.8E-20 T 22-04-2016 PNUC_RS10305 ee7953b9f1183e219d2f7e47f7ebc1f4 610 Gene3D G3DSA:3.40.50.10490 444 610 2.0E-64 T 22-04-2016 PNUC_RS10305 ee7953b9f1183e219d2f7e47f7ebc1f4 610 Gene3D G3DSA:3.40.50.10490 248 443 4.6E-58 T 22-04-2016 PNUC_RS10305 ee7953b9f1183e219d2f7e47f7ebc1f4 610 SUPERFAMILY SSF56235 2 237 2.32E-63 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS10305 ee7953b9f1183e219d2f7e47f7ebc1f4 610 Pfam PF01380 SIS domain 463 591 2.9E-25 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PNUC_RS10305 ee7953b9f1183e219d2f7e47f7ebc1f4 610 Pfam PF01380 SIS domain 295 418 1.4E-27 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PNUC_RS10305 ee7953b9f1183e219d2f7e47f7ebc1f4 610 SUPERFAMILY SSF53697 249 610 1.67E-107 T 22-04-2016 PNUC_RS10305 ee7953b9f1183e219d2f7e47f7ebc1f4 610 PANTHER PTHR10937 1 610 1.2E-295 T 22-04-2016 PNUC_RS01440 e2409e2003ef0f8c5b731029036426d4 243 Pfam PF13525 Outer membrane lipoprotein 122 242 4.1E-16 T 22-04-2016 PNUC_RS01440 e2409e2003ef0f8c5b731029036426d4 243 Pfam PF16331 TolA binding protein trimerisation 53 107 2.7E-12 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 PNUC_RS01440 e2409e2003ef0f8c5b731029036426d4 243 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 122 237 3.6E-33 T 22-04-2016 IPR014162 Tol-Pal system, YbgF PNUC_RS01440 e2409e2003ef0f8c5b731029036426d4 243 Gene3D G3DSA:1.25.40.10 126 230 4.1E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS01440 e2409e2003ef0f8c5b731029036426d4 243 PANTHER PTHR26312:SF74 140 236 1.5E-14 T 22-04-2016 PNUC_RS01440 e2409e2003ef0f8c5b731029036426d4 243 PANTHER PTHR26312 140 236 1.5E-14 T 22-04-2016 PNUC_RS01440 e2409e2003ef0f8c5b731029036426d4 243 SUPERFAMILY SSF48452 126 229 6.48E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS02750 af5fd6de2f858053ab86993975a3c992 360 PANTHER PTHR33376:SF5 1 342 9.9E-152 T 22-04-2016 PNUC_RS02750 af5fd6de2f858053ab86993975a3c992 360 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 8.0E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PNUC_RS02750 af5fd6de2f858053ab86993975a3c992 360 PANTHER PTHR33376 1 342 9.9E-152 T 22-04-2016 PNUC_RS02750 af5fd6de2f858053ab86993975a3c992 360 SUPERFAMILY SSF53850 145 292 5.84E-6 T 22-04-2016 PNUC_RS02750 af5fd6de2f858053ab86993975a3c992 360 PIRSF PIRSF039026 1 356 1.6E-122 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like PNUC_RS02750 af5fd6de2f858053ab86993975a3c992 360 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 319 3.6E-60 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PNUC_RS02035 175d551d6b342d0c08a941d33f204671 371 PANTHER PTHR22960 33 317 1.8E-112 T 22-04-2016 PNUC_RS02035 175d551d6b342d0c08a941d33f204671 371 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 46 57 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02035 175d551d6b342d0c08a941d33f204671 371 Pfam PF06463 Molybdenum Cofactor Synthesis C 221 347 9.4E-37 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02035 175d551d6b342d0c08a941d33f204671 371 Pfam PF04055 Radical SAM superfamily 44 213 2.7E-28 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PNUC_RS02035 175d551d6b342d0c08a941d33f204671 371 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 31 371 39.887 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02035 175d551d6b342d0c08a941d33f204671 371 SMART SM00729 40 254 1.7E-9 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PNUC_RS02035 175d551d6b342d0c08a941d33f204671 371 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 33 371 3.0E-113 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PNUC_RS02035 175d551d6b342d0c08a941d33f204671 371 Pfam PF13394 4Fe-4S single cluster domain 47 140 8.5E-11 T 22-04-2016 PNUC_RS02035 175d551d6b342d0c08a941d33f204671 371 Gene3D G3DSA:3.20.20.70 33 341 3.8E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS02035 175d551d6b342d0c08a941d33f204671 371 SUPERFAMILY SSF102114 32 325 3.79E-75 T 22-04-2016 PNUC_RS06425 4c643a5fb70870116491358e02b86ce9 393 PANTHER PTHR23501 15 393 6.3E-125 T 22-04-2016 PNUC_RS06425 4c643a5fb70870116491358e02b86ce9 393 Gene3D G3DSA:1.20.1250.20 16 197 1.7E-23 T 22-04-2016 PNUC_RS06425 4c643a5fb70870116491358e02b86ce9 393 Gene3D G3DSA:1.20.1250.20 226 391 2.6E-11 T 22-04-2016 PNUC_RS06425 4c643a5fb70870116491358e02b86ce9 393 PANTHER PTHR23501:SF56 15 393 6.3E-125 T 22-04-2016 PNUC_RS06425 4c643a5fb70870116491358e02b86ce9 393 Pfam PF07690 Major Facilitator Superfamily 19 317 2.8E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS06425 4c643a5fb70870116491358e02b86ce9 393 SUPERFAMILY SSF103473 6 391 3.4E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 127 179 6.9E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 SUPERFAMILY SSF46894 117 187 7.14E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 Pfam PF00072 Response regulator receiver domain 2 101 3.4E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 170 9.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 158 9.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 128 142 9.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 PANTHER PTHR26402 1 180 4.5E-42 T 22-04-2016 PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 SMART SM00448 1 101 1.2E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 Gene3D G3DSA:3.40.50.2300 2 133 1.2E-28 T 22-04-2016 PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 PANTHER PTHR26402:SF613 1 180 4.5E-42 T 22-04-2016 PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 SMART SM00421 125 182 2.3E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 Gene3D G3DSA:1.10.10.10 134 186 1.5E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03555 3ad0f505ef36d9cca4385b372972bfa7 194 SUPERFAMILY SSF52172 2 139 2.99E-28 T 22-04-2016 IPR011006 CheY-like superfamily PNUC_RS07355 15f08ba42eec0a9b4c408cf9864c8d6b 336 PANTHER PTHR11101 1 335 4.3E-99 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PNUC_RS07355 15f08ba42eec0a9b4c408cf9864c8d6b 336 Pfam PF01384 Phosphate transporter family 25 163 8.4E-39 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PNUC_RS07355 15f08ba42eec0a9b4c408cf9864c8d6b 336 Pfam PF01384 Phosphate transporter family 170 325 4.1E-53 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PNUC_RS02445 675bf91c97fc63d0f464110ca8b07912 670 PANTHER PTHR33362:SF1 3 658 4.9E-162 T 22-04-2016 PNUC_RS02445 675bf91c97fc63d0f464110ca8b07912 670 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 34 661 3.2E-161 T 22-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein PNUC_RS02445 675bf91c97fc63d0f464110ca8b07912 670 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 130 564 3.9E-67 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PNUC_RS02445 675bf91c97fc63d0f464110ca8b07912 670 PANTHER PTHR33362 3 658 4.9E-162 T 22-04-2016 PNUC_RS10255 5f9127bee2384f6757eed5ac7445dc1f 354 Gene3D G3DSA:3.20.20.330 14 345 1.4E-115 T 22-04-2016 IPR003726 Homocysteine-binding domain PNUC_RS10255 5f9127bee2384f6757eed5ac7445dc1f 354 PANTHER PTHR21091:SF112 18 353 1.5E-152 T 22-04-2016 PNUC_RS10255 5f9127bee2384f6757eed5ac7445dc1f 354 SUPERFAMILY SSF82282 16 345 2.49E-98 T 22-04-2016 IPR003726 Homocysteine-binding domain PNUC_RS10255 5f9127bee2384f6757eed5ac7445dc1f 354 PANTHER PTHR21091 18 353 1.5E-152 T 22-04-2016 PNUC_RS10255 5f9127bee2384f6757eed5ac7445dc1f 354 Pfam PF02574 Homocysteine S-methyltransferase 25 337 3.2E-90 T 22-04-2016 IPR003726 Homocysteine-binding domain PNUC_RS03690 345bf85cfdc115ef4fb42dc8d7258d4c 192 Pfam PF01794 Ferric reductase like transmembrane component 40 153 6.0E-14 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain PNUC_RS03690 345bf85cfdc115ef4fb42dc8d7258d4c 192 PANTHER PTHR36964 1 192 1.0E-46 T 22-04-2016 PNUC_RS03690 345bf85cfdc115ef4fb42dc8d7258d4c 192 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 1 192 23.905 T 22-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 PNUC_RS10550 fbb579c3d48aaebe639e706d70c148b1 131 PANTHER PTHR13355:SF5 45 128 1.9E-13 T 22-04-2016 PNUC_RS10550 fbb579c3d48aaebe639e706d70c148b1 131 PANTHER PTHR13355 45 128 1.9E-13 T 22-04-2016 PNUC_RS10550 fbb579c3d48aaebe639e706d70c148b1 131 Gene3D G3DSA:3.40.630.30 12 123 7.9E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS10550 fbb579c3d48aaebe639e706d70c148b1 131 SUPERFAMILY SSF55729 13 124 5.49E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS10550 fbb579c3d48aaebe639e706d70c148b1 131 Pfam PF13673 Acetyltransferase (GNAT) domain 31 122 4.9E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 PNUC_RS08710 741fd8c8819dbf3c03cdd9a4d5d14d42 93 Pfam PF11604 Copper binding periplasmic protein CusF 26 91 4.1E-18 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF PNUC_RS02150 7a14d7b333bf38be0d0210a0f9646719 357 PANTHER PTHR30480 11 98 1.4E-97 T 22-04-2016 PNUC_RS02150 7a14d7b333bf38be0d0210a0f9646719 357 PANTHER PTHR30480 114 327 1.4E-97 T 22-04-2016 PNUC_RS02150 7a14d7b333bf38be0d0210a0f9646719 357 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 251 268 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 PNUC_RS02150 7a14d7b333bf38be0d0210a0f9646719 357 SUPERFAMILY SSF51445 11 327 3.79E-75 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PNUC_RS02150 7a14d7b333bf38be0d0210a0f9646719 357 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 10 356 48.437 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 PNUC_RS02150 7a14d7b333bf38be0d0210a0f9646719 357 Gene3D G3DSA:3.20.20.300 11 327 8.2E-85 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PNUC_RS02150 7a14d7b333bf38be0d0210a0f9646719 357 PANTHER PTHR30480:SF7 11 98 1.4E-97 T 22-04-2016 PNUC_RS02150 7a14d7b333bf38be0d0210a0f9646719 357 PANTHER PTHR30480:SF7 114 327 1.4E-97 T 22-04-2016 PNUC_RS02150 7a14d7b333bf38be0d0210a0f9646719 357 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 16 325 6.9E-70 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PNUC_RS07420 ca5a177db6fae8c3cbd2bed2a708d239 154 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 10 123 2.5E-27 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PNUC_RS07420 ca5a177db6fae8c3cbd2bed2a708d239 154 SUPERFAMILY SSF55620 7 151 4.5E-38 T 22-04-2016 PNUC_RS07420 ca5a177db6fae8c3cbd2bed2a708d239 154 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 10 152 2.2E-36 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PNUC_RS07420 ca5a177db6fae8c3cbd2bed2a708d239 154 PANTHER PTHR12589 1 149 3.6E-29 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PNUC_RS07420 ca5a177db6fae8c3cbd2bed2a708d239 154 Gene3D G3DSA:3.30.479.10 8 151 6.0E-38 T 22-04-2016 PNUC_RS01205 c6ccab10191c313f7042eb5f9b68a3bb 253 SUPERFAMILY SSF75217 72 245 2.53E-42 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PNUC_RS01205 c6ccab10191c313f7042eb5f9b68a3bb 253 SUPERFAMILY SSF88697 1 64 3.73E-9 T 22-04-2016 IPR015947 PUA-like domain PNUC_RS01205 c6ccab10191c313f7042eb5f9b68a3bb 253 PANTHER PTHR30027 1 251 7.0E-64 T 22-04-2016 PNUC_RS01205 c6ccab10191c313f7042eb5f9b68a3bb 253 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 242 4.9E-46 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS01205 c6ccab10191c313f7042eb5f9b68a3bb 253 PANTHER PTHR30027:SF3 1 251 7.0E-64 T 22-04-2016 PNUC_RS01205 c6ccab10191c313f7042eb5f9b68a3bb 253 PIRSF PIRSF015601 1 244 5.1E-49 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS01205 c6ccab10191c313f7042eb5f9b68a3bb 253 Gene3D G3DSA:3.40.1280.10 1 245 3.2E-66 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PNUC_RS01205 c6ccab10191c313f7042eb5f9b68a3bb 253 Pfam PF04452 RNA methyltransferase 18 240 1.4E-56 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 PANTHER PTHR30153 13 238 9.5E-184 T 22-04-2016 PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 PANTHER PTHR30153 591 825 9.5E-184 T 22-04-2016 PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 Gene3D G3DSA:3.10.28.10 446 540 1.1E-19 T 22-04-2016 IPR027434 Homing endonuclease GO:0004519 PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 SUPERFAMILY SSF52540 591 806 1.68E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 SUPERFAMILY SSF52540 203 238 4.91E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 Gene3D G3DSA:3.40.50.300 193 243 2.3E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 Gene3D G3DSA:3.40.50.300 598 817 2.3E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 Gene3D G3DSA:1.10.860.10 29 130 2.9E-32 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 SUPERFAMILY SSF48024 27 138 4.71E-33 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 29 817 5.5E-163 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 SUPERFAMILY SSF51294 241 364 2.35E-11 T 22-04-2016 IPR028992 Hedgehog/Intein (Hint) domain PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 SUPERFAMILY SSF51294 524 590 2.35E-11 T 22-04-2016 IPR028992 Hedgehog/Intein (Hint) domain PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 Pfam PF00772 DnaB-like helicase N terminal domain 29 129 1.4E-30 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 Gene3D G3DSA:2.170.16.10 244 336 1.7E-7 T 22-04-2016 IPR028992 Hedgehog/Intein (Hint) domain PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 Gene3D G3DSA:2.170.16.10 541 591 1.7E-7 T 22-04-2016 IPR028992 Hedgehog/Intein (Hint) domain PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 Pfam PF03796 DnaB-like helicase C terminal domain 590 815 2.0E-94 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 Pfam PF03796 DnaB-like helicase C terminal domain 207 239 3.1E-11 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 PNUC_RS02225 61b3160cb6ba89b6cfb0a1fb9ad8d89c 831 SUPERFAMILY SSF55608 442 527 7.37E-16 T 22-04-2016 IPR027434 Homing endonuclease GO:0004519 PNUC_RS00270 eaaa15607ca99952f99cd95aa260bd97 215 Pfam PF00466 Ribosomal protein L10 6 100 1.7E-21 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 PNUC_RS00270 eaaa15607ca99952f99cd95aa260bd97 215 SUPERFAMILY SSF160369 4 159 1.57E-47 T 22-04-2016 PNUC_RS00270 eaaa15607ca99952f99cd95aa260bd97 215 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 8 142 3.0E-4 T 22-04-2016 PNUC_RS00270 eaaa15607ca99952f99cd95aa260bd97 215 PANTHER PTHR11560 3 183 1.0E-46 T 22-04-2016 PNUC_RS00270 eaaa15607ca99952f99cd95aa260bd97 215 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 26.221 T 22-04-2016 IPR022973 Ribosomal protein L10 PNUC_RS03885 9766481ede78e3e30538f988c520d914 186 Pfam PF14803 Nudix N-terminal 2 35 4.5E-17 T 22-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- PNUC_RS03885 9766481ede78e3e30538f988c520d914 186 PANTHER PTHR22769 1 172 1.0E-66 T 22-04-2016 PNUC_RS03885 9766481ede78e3e30538f988c520d914 186 Gene3D G3DSA:3.90.79.10 36 163 1.3E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS03885 9766481ede78e3e30538f988c520d914 186 PANTHER PTHR22769:SF17 1 172 1.0E-66 T 22-04-2016 PNUC_RS03885 9766481ede78e3e30538f988c520d914 186 Gene3D G3DSA:2.20.70.10 1 35 2.4E-17 T 22-04-2016 PNUC_RS03885 9766481ede78e3e30538f988c520d914 186 SUPERFAMILY SSF55811 2 162 1.03E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS03885 9766481ede78e3e30538f988c520d914 186 Pfam PF00293 NUDIX domain 39 154 3.3E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PNUC_RS03885 9766481ede78e3e30538f988c520d914 186 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PNUC_RS05665 04d39f7a4cf7937dc672afc6fdf3335f 480 SUPERFAMILY SSF55874 324 476 6.94E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS05665 04d39f7a4cf7937dc672afc6fdf3335f 480 SMART SM00387 368 478 3.7E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS05665 04d39f7a4cf7937dc672afc6fdf3335f 480 SMART SM00388 257 327 1.9E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS05665 04d39f7a4cf7937dc672afc6fdf3335f 480 SUPERFAMILY SSF47384 256 321 2.75E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS05665 04d39f7a4cf7937dc672afc6fdf3335f 480 Gene3D G3DSA:3.30.565.10 330 477 5.2E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS05665 04d39f7a4cf7937dc672afc6fdf3335f 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 4.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS05665 04d39f7a4cf7937dc672afc6fdf3335f 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 456 4.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS05665 04d39f7a4cf7937dc672afc6fdf3335f 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 475 4.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PNUC_RS05665 04d39f7a4cf7937dc672afc6fdf3335f 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 320 2.1E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PNUC_RS05665 04d39f7a4cf7937dc672afc6fdf3335f 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 477 3.5E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PNUC_RS05665 04d39f7a4cf7937dc672afc6fdf3335f 480 PANTHER PTHR24423 241 479 6.1E-49 T 22-04-2016 PNUC_RS05665 04d39f7a4cf7937dc672afc6fdf3335f 480 PANTHER PTHR24423 14 24 6.1E-49 T 22-04-2016 PNUC_RS09870 d017e11e55c9228a0a1f93b97cc32bbb 394 ProSitePatterns PS00216 Sugar transport proteins signature 1. 64 80 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PNUC_RS09870 d017e11e55c9228a0a1f93b97cc32bbb 394 Gene3D G3DSA:1.20.1250.20 202 383 6.7E-18 T 22-04-2016 PNUC_RS09870 d017e11e55c9228a0a1f93b97cc32bbb 394 Gene3D G3DSA:1.20.1250.20 8 189 3.2E-25 T 22-04-2016 PNUC_RS09870 d017e11e55c9228a0a1f93b97cc32bbb 394 Pfam PF07690 Major Facilitator Superfamily 17 343 8.2E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS09870 d017e11e55c9228a0a1f93b97cc32bbb 394 PANTHER PTHR23504:SF37 5 385 7.0E-82 T 22-04-2016 PNUC_RS09870 d017e11e55c9228a0a1f93b97cc32bbb 394 PANTHER PTHR23504 5 385 7.0E-82 T 22-04-2016 PNUC_RS09870 d017e11e55c9228a0a1f93b97cc32bbb 394 SUPERFAMILY SSF103473 7 379 1.57E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 281 4.2E-149 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 Gene3D G3DSA:1.20.58.180 206 287 1.4E-37 T 22-04-2016 PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 282 60.216 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 1.3E-68 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 1.3E-68 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 1.3E-68 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 1.3E-68 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 1.3E-68 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 1.3E-68 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 Gene3D G3DSA:3.30.930.10 1 204 2.7E-104 T 22-04-2016 PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 289 7.2E-158 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 SUPERFAMILY SSF55681 3 281 9.44E-131 T 22-04-2016 PNUC_RS09665 1e063c50cdcd57dd0958913babae726d 294 PANTHER PTHR30075 2 288 7.1E-243 T 22-04-2016 PNUC_RS09025 d345b08b78351603342ffc0fbf719591 399 Pfam PF00487 Fatty acid desaturase 25 228 1.5E-12 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 PNUC_RS09025 d345b08b78351603342ffc0fbf719591 399 PANTHER PTHR11351:SF33 24 385 2.1E-132 T 22-04-2016 PNUC_RS09025 d345b08b78351603342ffc0fbf719591 399 Pfam PF01610 Transposase 280 398 1.6E-9 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PNUC_RS09025 d345b08b78351603342ffc0fbf719591 399 PANTHER PTHR11351 24 385 2.1E-132 T 22-04-2016 PNUC_RS09775 8a6a6e518fea0deb57fbf3295e8ad8e2 133 PANTHER PTHR21569 10 133 3.8E-64 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 PNUC_RS09775 8a6a6e518fea0deb57fbf3295e8ad8e2 133 SUPERFAMILY SSF54211 9 133 1.59E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS09775 8a6a6e518fea0deb57fbf3295e8ad8e2 133 Gene3D G3DSA:3.30.230.10 9 133 7.7E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PNUC_RS09775 8a6a6e518fea0deb57fbf3295e8ad8e2 133 Pfam PF00380 Ribosomal protein S9/S16 13 133 1.6E-45 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 PNUC_RS09775 8a6a6e518fea0deb57fbf3295e8ad8e2 133 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 4 133 29.974 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid PNUC_RS09775 8a6a6e518fea0deb57fbf3295e8ad8e2 133 ProSitePatterns PS00360 Ribosomal protein S9 signature. 72 90 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 PNUC_RS07275 e75b795165638f703810f6b948de340f 394 PANTHER PTHR24023:SF593 73 381 2.3E-32 T 22-04-2016 PNUC_RS07275 e75b795165638f703810f6b948de340f 394 Gene3D G3DSA:3.30.1540.10 221 304 2.3E-21 T 22-04-2016 PNUC_RS07275 e75b795165638f703810f6b948de340f 394 Gene3D G3DSA:3.40.50.10540 305 394 4.2E-98 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS07275 e75b795165638f703810f6b948de340f 394 Gene3D G3DSA:3.40.50.10540 4 215 4.2E-98 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS07275 e75b795165638f703810f6b948de340f 394 PANTHER PTHR24023 73 381 2.3E-32 T 22-04-2016 PNUC_RS07275 e75b795165638f703810f6b948de340f 394 SUPERFAMILY SSF89796 3 394 1.14E-120 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS07275 e75b795165638f703810f6b948de340f 394 Pfam PF02515 CoA-transferase family III 6 371 3.2E-108 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 PNUC_RS08330 91fa9a53556df919ee9776d938958c6c 235 PANTHER PTHR10010:SF14 1 222 1.6E-62 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PNUC_RS08330 91fa9a53556df919ee9776d938958c6c 235 PANTHER PTHR10010 1 222 1.6E-62 T 22-04-2016 PNUC_RS08330 91fa9a53556df919ee9776d938958c6c 235 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 219 1.9E-65 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PNUC_RS08330 91fa9a53556df919ee9776d938958c6c 235 Gene3D G3DSA:1.20.58.220 125 229 4.7E-29 T 22-04-2016 PNUC_RS08330 91fa9a53556df919ee9776d938958c6c 235 SUPERFAMILY SSF109755 8 228 1.67E-65 T 22-04-2016 PNUC_RS08330 91fa9a53556df919ee9776d938958c6c 235 PIRSF PIRSF003107 3 224 1.4E-56 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PNUC_RS08330 91fa9a53556df919ee9776d938958c6c 235 Gene3D G3DSA:1.20.58.220 5 115 1.0E-31 T 22-04-2016 PNUC_RS08330 91fa9a53556df919ee9776d938958c6c 235 Pfam PF01895 PhoU domain 130 210 4.1E-16 T 22-04-2016 IPR026022 PhoU domain PNUC_RS08330 91fa9a53556df919ee9776d938958c6c 235 Pfam PF01895 PhoU domain 21 109 3.0E-18 T 22-04-2016 IPR026022 PhoU domain PNUC_RS05225 6c18bfd062bc6dfc8c648f94a855c21f 116 PANTHER PTHR21496 1 105 1.4E-18 T 22-04-2016 PNUC_RS05225 6c18bfd062bc6dfc8c648f94a855c21f 116 Gene3D G3DSA:2.102.10.10 8 109 2.5E-30 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PNUC_RS05225 6c18bfd062bc6dfc8c648f94a855c21f 116 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 9 106 1.9E-28 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PNUC_RS05225 6c18bfd062bc6dfc8c648f94a855c21f 116 SUPERFAMILY SSF50022 9 111 1.19E-32 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PNUC_RS05225 6c18bfd062bc6dfc8c648f94a855c21f 116 Pfam PF13806 Rieske-like [2Fe-2S] domain 9 106 2.0E-14 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PNUC_RS01245 ef23f50c90d0f17b8dcfe56cf076b9d9 353 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 231 325 1.6E-7 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PNUC_RS01245 ef23f50c90d0f17b8dcfe56cf076b9d9 353 Pfam PF06144 DNA polymerase III, delta subunit 24 205 3.8E-20 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 PNUC_RS01245 ef23f50c90d0f17b8dcfe56cf076b9d9 353 Gene3D G3DSA:1.10.8.60 155 238 2.5E-29 T 22-04-2016 PNUC_RS01245 ef23f50c90d0f17b8dcfe56cf076b9d9 353 SUPERFAMILY SSF48019 228 347 6.29E-26 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 PNUC_RS01245 ef23f50c90d0f17b8dcfe56cf076b9d9 353 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 22 345 2.0E-75 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 PNUC_RS01245 ef23f50c90d0f17b8dcfe56cf076b9d9 353 PANTHER PTHR34388 1 346 9.8E-49 T 22-04-2016 PNUC_RS01245 ef23f50c90d0f17b8dcfe56cf076b9d9 353 SUPERFAMILY SSF52540 18 226 6.9E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01245 ef23f50c90d0f17b8dcfe56cf076b9d9 353 Gene3D G3DSA:1.20.272.20 239 346 1.4E-33 T 22-04-2016 PNUC_RS01245 ef23f50c90d0f17b8dcfe56cf076b9d9 353 Gene3D G3DSA:3.40.50.300 2 150 1.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01290 15c8e22b86032b1219e6d9ca9b6a4958 179 Gene3D G3DSA:3.30.70.1300 31 118 7.7E-29 T 22-04-2016 PNUC_RS01290 15c8e22b86032b1219e6d9ca9b6a4958 179 Gene3D G3DSA:3.40.1740.10 1 30 6.8E-25 T 22-04-2016 PNUC_RS01290 15c8e22b86032b1219e6d9ca9b6a4958 179 Gene3D G3DSA:3.40.1740.10 119 169 6.8E-25 T 22-04-2016 PNUC_RS01290 15c8e22b86032b1219e6d9ca9b6a4958 179 PANTHER PTHR30327:SF1 1 179 1.2E-44 T 22-04-2016 PNUC_RS01290 15c8e22b86032b1219e6d9ca9b6a4958 179 SUPERFAMILY SSF143456 1 179 8.11E-54 T 22-04-2016 PNUC_RS01290 15c8e22b86032b1219e6d9ca9b6a4958 179 Pfam PF02622 Uncharacterized ACR, COG1678 2 166 2.2E-46 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 PNUC_RS01290 15c8e22b86032b1219e6d9ca9b6a4958 179 PANTHER PTHR30327 1 179 1.2E-44 T 22-04-2016 PNUC_RS01290 15c8e22b86032b1219e6d9ca9b6a4958 179 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 179 29.159 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 PNUC_RS02565 bd2e9f3adcbf439920075164d499cd7e 229 PANTHER PTHR10108 2 228 5.3E-116 T 22-04-2016 PNUC_RS02565 bd2e9f3adcbf439920075164d499cd7e 229 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 5 229 37.436 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 PNUC_RS02565 bd2e9f3adcbf439920075164d499cd7e 229 Gene3D G3DSA:3.40.50.150 18 211 9.1E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS02565 bd2e9f3adcbf439920075164d499cd7e 229 PANTHER PTHR10108:SF910 2 228 5.3E-116 T 22-04-2016 PNUC_RS02565 bd2e9f3adcbf439920075164d499cd7e 229 Pfam PF13489 Methyltransferase domain 45 198 1.1E-25 T 22-04-2016 PNUC_RS02565 bd2e9f3adcbf439920075164d499cd7e 229 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 7 224 6.1E-84 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 PNUC_RS02565 bd2e9f3adcbf439920075164d499cd7e 229 SUPERFAMILY SSF53335 11 228 4.18E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS00920 333f92cee73b3d0a102c324bbf0c394e 285 Pfam PF03799 Cell division protein FtsQ 134 257 7.6E-24 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB PNUC_RS00920 333f92cee73b3d0a102c324bbf0c394e 285 Pfam PF08478 POTRA domain, FtsQ-type 70 128 2.6E-13 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type PNUC_RS00920 333f92cee73b3d0a102c324bbf0c394e 285 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 25 265 18.885 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 PNUC_RS00920 333f92cee73b3d0a102c324bbf0c394e 285 PANTHER PTHR35851 39 282 1.5E-39 T 22-04-2016 PNUC_RS00920 333f92cee73b3d0a102c324bbf0c394e 285 PANTHER PTHR35851:SF1 39 282 1.5E-39 T 22-04-2016 PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 PANTHER PTHR11444 6 457 2.8E-263 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 SUPERFAMILY SSF48557 12 457 2.36E-102 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 Gene3D G3DSA:1.10.275.10 5 120 7.1E-43 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 PANTHER PTHR11444:SF17 6 457 2.8E-263 T 22-04-2016 PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 Gene3D G3DSA:1.10.40.30 392 447 2.2E-32 T 22-04-2016 PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 ProSitePatterns PS00163 Fumarate lyases signature. 296 305 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 PRINTS PR00149 Fumarate lyase superfamily signature 164 182 1.1E-16 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 PRINTS PR00149 Fumarate lyase superfamily signature 253 280 1.1E-16 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 PRINTS PR00149 Fumarate lyase superfamily signature 296 312 1.1E-16 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 PRINTS PR00149 Fumarate lyase superfamily signature 118 136 1.1E-16 T 22-04-2016 IPR000362 Fumarate lyase family PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 Pfam PF08328 Adenylosuccinate lyase C-terminal 333 447 3.8E-51 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 Pfam PF00206 Lyase 16 315 3.2E-57 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 14 457 5.9E-126 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PNUC_RS09315 d5bdbe5954b1a93eff00fd788e2ddd27 459 Gene3D G3DSA:1.20.200.10 121 391 2.0E-85 T 22-04-2016 PNUC_RS03460 20efddda4d6c1873df5e388ac585a0fb 259 PANTHER PTHR10953 199 246 3.0E-53 T 22-04-2016 PNUC_RS03460 20efddda4d6c1873df5e388ac585a0fb 259 PANTHER PTHR10953 1 166 3.0E-53 T 22-04-2016 PNUC_RS03460 20efddda4d6c1873df5e388ac585a0fb 259 SUPERFAMILY SSF69572 10 246 6.54E-55 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PNUC_RS03460 20efddda4d6c1873df5e388ac585a0fb 259 Pfam PF00899 ThiF family 22 246 1.9E-33 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PNUC_RS03460 20efddda4d6c1873df5e388ac585a0fb 259 Gene3D G3DSA:3.40.50.720 5 246 2.0E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03460 20efddda4d6c1873df5e388ac585a0fb 259 PANTHER PTHR10953:SF159 199 246 3.0E-53 T 22-04-2016 PNUC_RS03460 20efddda4d6c1873df5e388ac585a0fb 259 PANTHER PTHR10953:SF159 1 166 3.0E-53 T 22-04-2016 PNUC_RS02620 19b47453f88a666551551d50048dcb82 403 SUPERFAMILY SSF81901 47 257 8.63E-12 T 22-04-2016 PNUC_RS02620 19b47453f88a666551551d50048dcb82 403 Gene3D G3DSA:1.25.40.10 47 258 4.7E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS02620 19b47453f88a666551551d50048dcb82 403 Pfam PF13432 Tetratricopeptide repeat 190 242 0.0059 T 22-04-2016 PNUC_RS02620 19b47453f88a666551551d50048dcb82 403 PANTHER PTHR23083 354 363 3.3E-13 T 22-04-2016 PNUC_RS02620 19b47453f88a666551551d50048dcb82 403 PANTHER PTHR23083 33 247 3.3E-13 T 22-04-2016 PNUC_RS02620 19b47453f88a666551551d50048dcb82 403 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 7 395 30.207 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 PNUC_RS02620 19b47453f88a666551551d50048dcb82 403 SMART SM00028 41 74 310.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS02620 19b47453f88a666551551d50048dcb82 403 SMART SM00028 219 252 81.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS02620 19b47453f88a666551551d50048dcb82 403 SMART SM00028 75 108 150.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS02620 19b47453f88a666551551d50048dcb82 403 SMART SM00028 185 218 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00190 04310ad883e03c7094e621c6d9b63ab5 117 SUPERFAMILY SSF46626 36 110 1.98E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00190 04310ad883e03c7094e621c6d9b63ab5 117 Gene3D G3DSA:1.10.760.10 35 110 1.6E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00190 04310ad883e03c7094e621c6d9b63ab5 117 PRINTS PR00606 Class ID cytochrome C signature 101 111 3.4E-17 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PNUC_RS00190 04310ad883e03c7094e621c6d9b63ab5 117 PRINTS PR00606 Class ID cytochrome C signature 51 64 3.4E-17 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PNUC_RS00190 04310ad883e03c7094e621c6d9b63ab5 117 PRINTS PR00606 Class ID cytochrome C signature 74 87 3.4E-17 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PNUC_RS00190 04310ad883e03c7094e621c6d9b63ab5 117 PRINTS PR00606 Class ID cytochrome C signature 36 49 3.4E-17 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PNUC_RS00190 04310ad883e03c7094e621c6d9b63ab5 117 PRINTS PR00606 Class ID cytochrome C signature 89 99 3.4E-17 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PNUC_RS03970 ee090e41205254439a1a718196037912 234 Gene3D G3DSA:1.10.1060.10 104 232 6.9E-46 T 22-04-2016 PNUC_RS03970 ee090e41205254439a1a718196037912 234 Gene3D G3DSA:3.10.20.30 6 103 4.2E-36 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS03970 ee090e41205254439a1a718196037912 234 Pfam PF13534 4Fe-4S dicluster domain 144 217 2.6E-9 T 22-04-2016 PNUC_RS03970 ee090e41205254439a1a718196037912 234 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PNUC_RS03970 ee090e41205254439a1a718196037912 234 PANTHER PTHR11921 1 232 6.9E-127 T 22-04-2016 PNUC_RS03970 ee090e41205254439a1a718196037912 234 SUPERFAMILY SSF46548 104 231 4.01E-38 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PNUC_RS03970 ee090e41205254439a1a718196037912 234 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 108 3.0E-30 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PNUC_RS03970 ee090e41205254439a1a718196037912 234 SUPERFAMILY SSF54292 5 103 3.54E-28 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PNUC_RS03970 ee090e41205254439a1a718196037912 234 PANTHER PTHR11921:SF29 1 232 6.9E-127 T 22-04-2016 PNUC_RS03970 ee090e41205254439a1a718196037912 234 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 9 226 1.4E-82 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PNUC_RS00990 671bf5f807cd5fc0f39a0190cbbdd53c 166 PANTHER PTHR30487:SF0 4 162 1.2E-33 T 22-04-2016 PNUC_RS00990 671bf5f807cd5fc0f39a0190cbbdd53c 166 PANTHER PTHR30487 4 162 1.2E-33 T 22-04-2016 PNUC_RS00990 671bf5f807cd5fc0f39a0190cbbdd53c 166 Pfam PF01478 Type IV leader peptidase family 14 120 9.5E-23 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PNUC_RS00990 671bf5f807cd5fc0f39a0190cbbdd53c 166 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 103 118 6.1E-15 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PNUC_RS00990 671bf5f807cd5fc0f39a0190cbbdd53c 166 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 91 102 6.1E-15 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PNUC_RS00990 671bf5f807cd5fc0f39a0190cbbdd53c 166 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 21 38 6.1E-15 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PNUC_RS00990 671bf5f807cd5fc0f39a0190cbbdd53c 166 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 80 90 6.1E-15 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PNUC_RS00175 b9bc160761485e693f7a55be7efc70ef 298 SUPERFAMILY SSF53790 17 240 1.26E-68 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PNUC_RS00175 b9bc160761485e693f7a55be7efc70ef 298 Gene3D G3DSA:3.40.1010.10 18 126 3.9E-13 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PNUC_RS00175 b9bc160761485e693f7a55be7efc70ef 298 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 19 292 1.3E-65 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS00175 b9bc160761485e693f7a55be7efc70ef 298 Gene3D G3DSA:3.30.950.10 127 243 1.8E-29 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PNUC_RS00175 b9bc160761485e693f7a55be7efc70ef 298 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 96 107 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS00175 b9bc160761485e693f7a55be7efc70ef 298 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 19 221 1.3E-24 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PNUC_RS00175 b9bc160761485e693f7a55be7efc70ef 298 PANTHER PTHR21091:SF18 16 215 5.1E-64 T 22-04-2016 PNUC_RS00175 b9bc160761485e693f7a55be7efc70ef 298 PIRSF PIRSF005917 9 297 1.0E-88 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS00175 b9bc160761485e693f7a55be7efc70ef 298 PANTHER PTHR21091 16 215 5.1E-64 T 22-04-2016 PNUC_RS00175 b9bc160761485e693f7a55be7efc70ef 298 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 18 242 32.286 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PNUC_RS07215 b028df216a8b7c49bfe3a361231835ca 55 PIRSF PIRSF000071 1 55 3.3E-26 T 22-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 PNUC_RS07215 b028df216a8b7c49bfe3a361231835ca 55 PRINTS PR00163 Rubredoxin signature 3 19 3.5E-9 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 PNUC_RS07215 b028df216a8b7c49bfe3a361231835ca 55 PRINTS PR00163 Rubredoxin signature 33 49 3.5E-9 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 PNUC_RS07215 b028df216a8b7c49bfe3a361231835ca 55 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 PNUC_RS07215 b028df216a8b7c49bfe3a361231835ca 55 Gene3D G3DSA:2.20.28.10 1 54 2.5E-27 T 22-04-2016 IPR004039 Rubredoxin-type fold PNUC_RS07215 b028df216a8b7c49bfe3a361231835ca 55 Pfam PF00301 Rubredoxin 4 49 1.8E-23 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 PNUC_RS07215 b028df216a8b7c49bfe3a361231835ca 55 SUPERFAMILY SSF57802 1 53 1.3E-22 T 22-04-2016 PNUC_RS01475 5d06660339954eb0eded540c69ad4a53 148 Pfam PF03477 ATP cone domain 51 135 1.4E-14 T 22-04-2016 IPR005144 ATP-cone domain PNUC_RS01475 5d06660339954eb0eded540c69ad4a53 148 PANTHER PTHR30455 2 148 2.1E-62 T 22-04-2016 PNUC_RS01475 5d06660339954eb0eded540c69ad4a53 148 PANTHER PTHR30455:SF2 2 148 2.1E-62 T 22-04-2016 PNUC_RS01475 5d06660339954eb0eded540c69ad4a53 148 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.9E-58 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PNUC_RS01475 5d06660339954eb0eded540c69ad4a53 148 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 148 82.507 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PNUC_RS04450 966d60fc3ae20433ac556e7847293178 167 Gene3D G3DSA:2.40.100.10 2 165 2.8E-55 T 22-04-2016 IPR029000 Cyclophilin-like domain PNUC_RS04450 966d60fc3ae20433ac556e7847293178 167 PIRSF PIRSF001467 1 167 2.0E-28 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PNUC_RS04450 966d60fc3ae20433ac556e7847293178 167 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 163 2.0E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PNUC_RS04450 966d60fc3ae20433ac556e7847293178 167 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 38 55 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PNUC_RS04450 966d60fc3ae20433ac556e7847293178 167 PANTHER PTHR11071:SF192 5 167 1.9E-71 T 22-04-2016 PNUC_RS04450 966d60fc3ae20433ac556e7847293178 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 4.8E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PNUC_RS04450 966d60fc3ae20433ac556e7847293178 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 135 4.8E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PNUC_RS04450 966d60fc3ae20433ac556e7847293178 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 55 4.8E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PNUC_RS04450 966d60fc3ae20433ac556e7847293178 167 SUPERFAMILY SSF50891 3 165 2.78E-59 T 22-04-2016 IPR029000 Cyclophilin-like domain PNUC_RS04450 966d60fc3ae20433ac556e7847293178 167 PANTHER PTHR11071 5 167 1.9E-71 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PNUC_RS03345 fa47dc20f25f9f3f5c2ac97e2e6f864e 310 Gene3D G3DSA:3.10.25.10 205 308 2.3E-19 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS03345 fa47dc20f25f9f3f5c2ac97e2e6f864e 310 Gene3D G3DSA:3.40.50.170 1 198 1.0E-49 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS03345 fa47dc20f25f9f3f5c2ac97e2e6f864e 310 Pfam PF00551 Formyl transferase 1 161 4.9E-29 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS03345 fa47dc20f25f9f3f5c2ac97e2e6f864e 310 PANTHER PTHR11138 1 295 1.4E-56 T 22-04-2016 PNUC_RS03345 fa47dc20f25f9f3f5c2ac97e2e6f864e 310 SUPERFAMILY SSF50486 204 294 6.12E-17 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 PNUC_RS03345 fa47dc20f25f9f3f5c2ac97e2e6f864e 310 Pfam PF02911 Formyl transferase, C-terminal domain 205 294 9.9E-14 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS03345 fa47dc20f25f9f3f5c2ac97e2e6f864e 310 SUPERFAMILY SSF53328 1 197 2.49E-47 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS01490 959efebe99660f72ec079d4e5c1fc9bf 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.961 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 PNUC_RS01490 959efebe99660f72ec079d4e5c1fc9bf 59 Pfam PF03966 Trm112p-like protein 2 40 3.3E-11 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 PNUC_RS01490 959efebe99660f72ec079d4e5c1fc9bf 59 SUPERFAMILY SSF158997 1 55 1.83E-21 T 22-04-2016 PNUC_RS01490 959efebe99660f72ec079d4e5c1fc9bf 59 Gene3D G3DSA:2.20.25.10 8 57 4.2E-26 T 22-04-2016 PNUC_RS01490 959efebe99660f72ec079d4e5c1fc9bf 59 PANTHER PTHR33505 1 57 1.1E-22 T 22-04-2016 PNUC_RS00555 719ca56bc09eb63cfd786a308768b6ba 210 Gene3D G3DSA:3.10.450.50 120 174 1.8E-32 T 22-04-2016 IPR032710 NTF2-like domain PNUC_RS00555 719ca56bc09eb63cfd786a308768b6ba 210 Gene3D G3DSA:3.10.450.50 32 76 1.8E-32 T 22-04-2016 IPR032710 NTF2-like domain PNUC_RS00555 719ca56bc09eb63cfd786a308768b6ba 210 PANTHER PTHR36573 6 205 6.1E-34 T 22-04-2016 PNUC_RS00555 719ca56bc09eb63cfd786a308768b6ba 210 PIRSF PIRSF004649 3 210 4.9E-49 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PNUC_RS00555 719ca56bc09eb63cfd786a308768b6ba 210 Gene3D G3DSA:1.10.10.640 175 208 1.2E-30 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical PNUC_RS00555 719ca56bc09eb63cfd786a308768b6ba 210 Gene3D G3DSA:1.10.10.640 77 117 1.2E-30 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical PNUC_RS00555 719ca56bc09eb63cfd786a308768b6ba 210 Pfam PF05494 MlaC protein 40 200 3.8E-54 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PNUC_RS06765 1eed220ccceec9fcbb1567da0c3b969d 442 SUPERFAMILY SSF55681 16 327 7.47E-97 T 22-04-2016 PNUC_RS06765 1eed220ccceec9fcbb1567da0c3b969d 442 Pfam PF13393 Histidyl-tRNA synthetase 21 323 1.5E-50 T 22-04-2016 PNUC_RS06765 1eed220ccceec9fcbb1567da0c3b969d 442 PANTHER PTHR11476 11 442 1.3E-192 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PNUC_RS06765 1eed220ccceec9fcbb1567da0c3b969d 442 PIRSF PIRSF001549 12 436 5.0E-116 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PNUC_RS06765 1eed220ccceec9fcbb1567da0c3b969d 442 Pfam PF03129 Anticodon binding domain 340 431 2.5E-10 T 22-04-2016 IPR004154 Anticodon-binding PNUC_RS06765 1eed220ccceec9fcbb1567da0c3b969d 442 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 14 439 32.323 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 PNUC_RS06765 1eed220ccceec9fcbb1567da0c3b969d 442 SUPERFAMILY SSF52954 338 432 1.64E-19 T 22-04-2016 IPR004154 Anticodon-binding PNUC_RS06765 1eed220ccceec9fcbb1567da0c3b969d 442 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 19 425 7.1E-153 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 PNUC_RS06765 1eed220ccceec9fcbb1567da0c3b969d 442 Gene3D G3DSA:3.40.50.800 338 430 5.8E-28 T 22-04-2016 IPR004154 Anticodon-binding PNUC_RS06765 1eed220ccceec9fcbb1567da0c3b969d 442 PANTHER PTHR11476:SF9 11 442 1.3E-192 T 22-04-2016 PNUC_RS06765 1eed220ccceec9fcbb1567da0c3b969d 442 Gene3D G3DSA:3.30.930.10 15 196 7.3E-91 T 22-04-2016 PNUC_RS06765 1eed220ccceec9fcbb1567da0c3b969d 442 Gene3D G3DSA:3.30.930.10 232 333 7.3E-91 T 22-04-2016 PNUC_RS07410 ee5ec3781b86db2844bbb60aebc26225 314 SUPERFAMILY SSF141986 144 306 4.32E-38 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain PNUC_RS07410 ee5ec3781b86db2844bbb60aebc26225 314 Gene3D G3DSA:3.40.50.10740 3 164 3.0E-37 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain PNUC_RS07410 ee5ec3781b86db2844bbb60aebc26225 314 SUPERFAMILY SSF52317 4 160 4.35E-32 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS07410 ee5ec3781b86db2844bbb60aebc26225 314 PIRSF PIRSF028757 1 314 2.2E-69 T 22-04-2016 IPR003507 Peptidase family S66 PNUC_RS07410 ee5ec3781b86db2844bbb60aebc26225 314 Gene3D G3DSA:3.50.30.60 175 309 4.4E-41 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain PNUC_RS07410 ee5ec3781b86db2844bbb60aebc26225 314 Pfam PF02016 LD-carboxypeptidase 4 301 2.8E-65 T 22-04-2016 IPR003507 Peptidase family S66 PNUC_RS07410 ee5ec3781b86db2844bbb60aebc26225 314 PANTHER PTHR30237 4 312 1.0E-72 T 22-04-2016 PNUC_RS07410 ee5ec3781b86db2844bbb60aebc26225 314 PANTHER PTHR30237:SF2 4 312 1.0E-72 T 22-04-2016 PNUC_RS00980 34cd52dad7d2d8a4bf8dfc0db472769b 250 PANTHER PTHR39455 1 249 3.7E-49 T 22-04-2016 PNUC_RS00980 34cd52dad7d2d8a4bf8dfc0db472769b 250 Gene3D G3DSA:2.60.440.10 172 248 1.7E-19 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain PNUC_RS00980 34cd52dad7d2d8a4bf8dfc0db472769b 250 Gene3D G3DSA:1.10.3900.10 10 171 1.4E-53 T 22-04-2016 PNUC_RS00980 34cd52dad7d2d8a4bf8dfc0db472769b 250 PANTHER PTHR39455:SF1 1 249 3.7E-49 T 22-04-2016 PNUC_RS00980 34cd52dad7d2d8a4bf8dfc0db472769b 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 248 28.774 T 22-04-2016 IPR009777 Cell division protein ZapD PNUC_RS00980 34cd52dad7d2d8a4bf8dfc0db472769b 250 Pfam PF07072 Protein of unknown function (DUF1342) 16 224 1.2E-68 T 22-04-2016 IPR009777 Cell division protein ZapD PNUC_RS00980 34cd52dad7d2d8a4bf8dfc0db472769b 250 SUPERFAMILY SSF160950 2 248 7.45E-73 T 22-04-2016 PNUC_RS01575 0671bd077adabfb7cd112d58551dd5d4 180 PANTHER PTHR33741 21 169 1.2E-24 T 22-04-2016 PNUC_RS01575 0671bd077adabfb7cd112d58551dd5d4 180 Pfam PF04982 HPP family 59 175 6.4E-33 T 22-04-2016 IPR007065 HPP PNUC_RS08570 ed5ccfb03d1b88c4f3bb889927735189 195 Gene3D G3DSA:1.10.10.10 1 127 1.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08570 ed5ccfb03d1b88c4f3bb889927735189 195 SUPERFAMILY SSF46785 4 124 7.44E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08570 ed5ccfb03d1b88c4f3bb889927735189 195 Pfam PF02082 Transcriptional regulator 1 83 5.6E-19 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type PNUC_RS08570 ed5ccfb03d1b88c4f3bb889927735189 195 PANTHER PTHR33221 2 144 1.9E-19 T 22-04-2016 PNUC_RS02755 49fc149dabb08ec329785c3b3c8eb684 433 Pfam PF01566 Natural resistance-associated macrophage protein 45 408 2.9E-74 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PNUC_RS02755 49fc149dabb08ec329785c3b3c8eb684 433 PANTHER PTHR11706 242 433 1.5E-93 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PNUC_RS02755 49fc149dabb08ec329785c3b3c8eb684 433 PANTHER PTHR11706 25 226 1.5E-93 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PNUC_RS02755 49fc149dabb08ec329785c3b3c8eb684 433 PANTHER PTHR11706:SF43 25 226 1.5E-93 T 22-04-2016 PNUC_RS02755 49fc149dabb08ec329785c3b3c8eb684 433 PANTHER PTHR11706:SF43 242 433 1.5E-93 T 22-04-2016 PNUC_RS09690 5ecf3aefb3dc04195412325740f4df3b 335 PANTHER PTHR30004:SF5 5 331 1.1E-124 T 22-04-2016 PNUC_RS09690 5ecf3aefb3dc04195412325740f4df3b 335 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 10 328 1.9E-114 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PNUC_RS09690 5ecf3aefb3dc04195412325740f4df3b 335 SUPERFAMILY SSF53659 9 330 3.68E-98 T 22-04-2016 PNUC_RS09690 5ecf3aefb3dc04195412325740f4df3b 335 PANTHER PTHR30004 5 331 1.1E-124 T 22-04-2016 PNUC_RS09690 5ecf3aefb3dc04195412325740f4df3b 335 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 6 328 33.639 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PNUC_RS09690 5ecf3aefb3dc04195412325740f4df3b 335 Gene3D G3DSA:3.40.718.10 7 331 2.0E-118 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PNUC_RS09690 5ecf3aefb3dc04195412325740f4df3b 335 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 59 324 4.1E-102 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PNUC_RS00505 438518435df8316528f031f143f378ca 353 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 296 329 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 PNUC_RS00505 438518435df8316528f031f143f378ca 353 Pfam PF07660 Secretin and TonB N terminus short domain 47 93 1.2E-7 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PNUC_RS00505 438518435df8316528f031f143f378ca 353 SMART SM00965 46 94 2.0E-4 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PNUC_RS00505 438518435df8316528f031f143f378ca 353 Pfam PF00263 Bacterial type II and III secretion system protein 197 350 1.7E-45 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 PNUC_RS00505 438518435df8316528f031f143f378ca 353 PANTHER PTHR30604 122 351 5.5E-47 T 22-04-2016 PNUC_RS00505 438518435df8316528f031f143f378ca 353 PRINTS PR00811 Bacterial general secretion pathway protein D signature 193 217 5.4E-24 T 22-04-2016 IPR001775 GspD/PilQ family PNUC_RS00505 438518435df8316528f031f143f378ca 353 PRINTS PR00811 Bacterial general secretion pathway protein D signature 122 132 5.4E-24 T 22-04-2016 IPR001775 GspD/PilQ family PNUC_RS00505 438518435df8316528f031f143f378ca 353 PRINTS PR00811 Bacterial general secretion pathway protein D signature 228 238 5.4E-24 T 22-04-2016 IPR001775 GspD/PilQ family PNUC_RS00505 438518435df8316528f031f143f378ca 353 PRINTS PR00811 Bacterial general secretion pathway protein D signature 315 333 5.4E-24 T 22-04-2016 IPR001775 GspD/PilQ family PNUC_RS00505 438518435df8316528f031f143f378ca 353 PRINTS PR00811 Bacterial general secretion pathway protein D signature 338 352 5.4E-24 T 22-04-2016 IPR001775 GspD/PilQ family PNUC_RS09595 2ba76cbb7a3bdedfa041f03726e38684 203 PANTHER PTHR30212 1 201 2.1E-39 T 22-04-2016 PNUC_RS09595 2ba76cbb7a3bdedfa041f03726e38684 203 Gene3D G3DSA:2.40.33.20 1 201 1.5E-56 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like PNUC_RS09595 2ba76cbb7a3bdedfa041f03726e38684 203 Pfam PF03473 MOSC domain 58 175 9.7E-21 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PNUC_RS09595 2ba76cbb7a3bdedfa041f03726e38684 203 SUPERFAMILY SSF50800 1 201 4.5E-48 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain PNUC_RS09595 2ba76cbb7a3bdedfa041f03726e38684 203 PANTHER PTHR30212:SF2 1 201 2.1E-39 T 22-04-2016 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 Gene3D G3DSA:1.10.8.10 3 55 1.0E-20 T 22-04-2016 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 Pfam PF00889 Elongation factor TS 71 269 1.0E-68 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 SUPERFAMILY SSF46934 3 56 3.06E-13 T 22-04-2016 IPR009060 UBA-like GO:0005515 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 Hamap MF_00050 Elongation factor Ts [tsf]. 1 286 77.971 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 Gene3D G3DSA:3.30.479.20 57 145 3.2E-17 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 286 4.3E-92 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 SUPERFAMILY SSF54713 150 286 3.43E-49 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 PANTHER PTHR11741 1 289 6.2E-117 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 Gene3D G3DSA:1.10.286.20 191 232 1.5E-17 T 22-04-2016 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 SUPERFAMILY SSF54713 56 145 5.89E-23 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 Gene3D G3DSA:3.30.479.20 233 268 3.0E-27 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PNUC_RS07585 9a3d5b21822cc223a7e16f7119d8a3bf 294 Gene3D G3DSA:3.30.479.20 150 184 3.0E-27 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PNUC_RS01510 0f90f061f86b8ec2519ebfbb851e7932 408 PANTHER PTHR30008 1 408 2.3E-141 T 22-04-2016 PNUC_RS01510 0f90f061f86b8ec2519ebfbb851e7932 408 Pfam PF13742 OB-fold nucleic acid binding domain 9 101 4.0E-27 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 PNUC_RS01510 0f90f061f86b8ec2519ebfbb851e7932 408 PANTHER PTHR30008:SF0 1 408 2.3E-141 T 22-04-2016 PNUC_RS01510 0f90f061f86b8ec2519ebfbb851e7932 408 Pfam PF02601 Exonuclease VII, large subunit 125 338 1.4E-78 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 PNUC_RS01510 0f90f061f86b8ec2519ebfbb851e7932 408 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 10 397 3.1E-137 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PNUC_RS01510 0f90f061f86b8ec2519ebfbb851e7932 408 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 398 26.792 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PNUC_RS09540 8fdd793e05259d761746af0e65726f87 193 PANTHER PTHR30349 8 193 7.1E-28 T 22-04-2016 PNUC_RS09540 8fdd793e05259d761746af0e65726f87 193 SUPERFAMILY SSF56349 2 192 9.12E-39 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PNUC_RS09540 8fdd793e05259d761746af0e65726f87 193 Gene3D G3DSA:1.10.443.10 7 190 2.4E-36 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS09540 8fdd793e05259d761746af0e65726f87 193 Pfam PF00589 Phage integrase family 6 183 5.5E-28 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS01380 706e69f9b17f2a4a194829f1480168f6 311 SUPERFAMILY SSF51735 1 308 1.96E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01380 706e69f9b17f2a4a194829f1480168f6 311 PANTHER PTHR10366 3 310 3.0E-161 T 22-04-2016 PNUC_RS01380 706e69f9b17f2a4a194829f1480168f6 311 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 302 1.8E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01380 706e69f9b17f2a4a194829f1480168f6 311 PANTHER PTHR10366:SF399 3 310 3.0E-161 T 22-04-2016 PNUC_RS01380 706e69f9b17f2a4a194829f1480168f6 311 Gene3D G3DSA:3.90.25.10 170 309 2.8E-58 T 22-04-2016 PNUC_RS01380 706e69f9b17f2a4a194829f1480168f6 311 Gene3D G3DSA:3.40.50.720 1 169 3.4E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01585 4161a685a235d49b040a808c301db680 491 Gene3D G3DSA:3.90.550.10 4 292 4.9E-84 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS01585 4161a685a235d49b040a808c301db680 491 PANTHER PTHR12526:SF387 373 490 1.4E-93 T 22-04-2016 PNUC_RS01585 4161a685a235d49b040a808c301db680 491 PANTHER PTHR12526:SF387 166 310 1.4E-93 T 22-04-2016 PNUC_RS01585 4161a685a235d49b040a808c301db680 491 Pfam PF00483 Nucleotidyl transferase 6 306 1.3E-53 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PNUC_RS01585 4161a685a235d49b040a808c301db680 491 Pfam PF01050 Mannose-6-phosphate isomerase 336 486 3.5E-70 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 PNUC_RS01585 4161a685a235d49b040a808c301db680 491 SUPERFAMILY SSF53448 4 303 2.38E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS01585 4161a685a235d49b040a808c301db680 491 PANTHER PTHR12526 373 490 1.4E-93 T 22-04-2016 PNUC_RS01585 4161a685a235d49b040a808c301db680 491 PANTHER PTHR12526 166 310 1.4E-93 T 22-04-2016 PNUC_RS01585 4161a685a235d49b040a808c301db680 491 Gene3D G3DSA:2.60.120.10 377 490 4.2E-46 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS01585 4161a685a235d49b040a808c301db680 491 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 490 2.3E-186 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 PNUC_RS01585 4161a685a235d49b040a808c301db680 491 SUPERFAMILY SSF51182 198 490 9.43E-80 T 22-04-2016 IPR011051 RmlC-like cupin domain PNUC_RS04580 ef35d00777671e09b1249d8dc19c810f 93 Pfam PF13997 YqjK-like protein 15 87 3.9E-19 T 22-04-2016 IPR025612 YqjK-like protein PNUC_RS08765 c6d8854f0c1577ee97192ffb81861dc1 241 SUPERFAMILY SSF52540 9 223 8.83E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08765 c6d8854f0c1577ee97192ffb81861dc1 241 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 49 164 8.8E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS08765 c6d8854f0c1577ee97192ffb81861dc1 241 Gene3D G3DSA:3.40.50.300 8 168 2.0E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02865 8ba62a57836537c708b513b7ece14568 432 PIRSF PIRSF029171 2 429 1.7E-67 T 22-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 PNUC_RS02865 8ba62a57836537c708b513b7ece14568 432 Gene3D G3DSA:3.40.50.1820 263 264 2.6E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS02865 8ba62a57836537c708b513b7ece14568 432 Gene3D G3DSA:3.40.50.1820 322 407 2.6E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS02865 8ba62a57836537c708b513b7ece14568 432 Gene3D G3DSA:3.40.50.1820 78 213 2.6E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS02865 8ba62a57836537c708b513b7ece14568 432 Pfam PF03583 Secretory lipase 141 216 3.7E-8 T 22-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 PNUC_RS02865 8ba62a57836537c708b513b7ece14568 432 Pfam PF03583 Secretory lipase 353 428 7.5E-8 T 22-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 PNUC_RS02865 8ba62a57836537c708b513b7ece14568 432 SUPERFAMILY SSF53474 78 423 6.64E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS07210 d063a63f591be3bd84d8ea5a08f99ce5 161 SUPERFAMILY SSF47240 7 129 3.84E-30 T 22-04-2016 IPR009078 Ferritin-like superfamily PNUC_RS07210 d063a63f591be3bd84d8ea5a08f99ce5 161 PANTHER PTHR33746:SF3 1 139 2.3E-37 T 22-04-2016 PNUC_RS07210 d063a63f591be3bd84d8ea5a08f99ce5 161 PANTHER PTHR33746 1 139 2.3E-37 T 22-04-2016 PNUC_RS07210 d063a63f591be3bd84d8ea5a08f99ce5 161 Pfam PF02915 Rubrerythrin 69 126 4.4E-5 T 22-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 PNUC_RS07210 d063a63f591be3bd84d8ea5a08f99ce5 161 Pfam PF02915 Rubrerythrin 11 61 2.1E-9 T 22-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 PNUC_RS07210 d063a63f591be3bd84d8ea5a08f99ce5 161 Gene3D G3DSA:1.20.1260.10 7 129 1.8E-33 T 22-04-2016 IPR012347 Ferritin-related PNUC_RS06925 f187944709a486acb4ed3f0845028c0e 345 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 122 6.1E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS06925 f187944709a486acb4ed3f0845028c0e 345 PRINTS PR00111 Alpha/beta hydrolase fold signature 165 178 6.1E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS06925 f187944709a486acb4ed3f0845028c0e 345 PRINTS PR00111 Alpha/beta hydrolase fold signature 271 285 6.1E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS06925 f187944709a486acb4ed3f0845028c0e 345 PRINTS PR00111 Alpha/beta hydrolase fold signature 151 164 6.1E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS06925 f187944709a486acb4ed3f0845028c0e 345 PANTHER PTHR10992:SF771 8 343 3.5E-56 T 22-04-2016 PNUC_RS06925 f187944709a486acb4ed3f0845028c0e 345 SUPERFAMILY SSF53474 49 342 4.59E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS06925 f187944709a486acb4ed3f0845028c0e 345 Pfam PF00561 alpha/beta hydrolase fold 81 193 1.2E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS06925 f187944709a486acb4ed3f0845028c0e 345 Gene3D G3DSA:3.40.50.1820 47 342 3.0E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS06925 f187944709a486acb4ed3f0845028c0e 345 PRINTS PR00412 Epoxide hydrolase signature 107 122 1.5E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PNUC_RS06925 f187944709a486acb4ed3f0845028c0e 345 PRINTS PR00412 Epoxide hydrolase signature 318 340 1.5E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PNUC_RS06925 f187944709a486acb4ed3f0845028c0e 345 PRINTS PR00412 Epoxide hydrolase signature 165 178 1.5E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PNUC_RS06925 f187944709a486acb4ed3f0845028c0e 345 PANTHER PTHR10992 8 343 3.5E-56 T 22-04-2016 PNUC_RS05500 90f636e7036054db1cdee17f8963e734 252 Pfam PF00121 Triosephosphate isomerase 5 250 1.6E-86 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PNUC_RS05500 90f636e7036054db1cdee17f8963e734 252 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 252 36.65 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PNUC_RS05500 90f636e7036054db1cdee17f8963e734 252 SUPERFAMILY SSF51351 1 251 1.83E-85 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PNUC_RS05500 90f636e7036054db1cdee17f8963e734 252 Gene3D G3DSA:3.20.20.70 1 251 4.0E-96 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS05500 90f636e7036054db1cdee17f8963e734 252 PANTHER PTHR21139 1 252 2.8E-101 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PNUC_RS05500 90f636e7036054db1cdee17f8963e734 252 ProSitePatterns PS00171 Triosephosphate isomerase active site. 169 179 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PNUC_RS05500 90f636e7036054db1cdee17f8963e734 252 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 243 4.7E-60 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PNUC_RS10435 8f466eed451e12daad096cc3d8c52f83 224 Pfam PF04340 Protein of unknown function, DUF484 11 216 2.5E-23 T 22-04-2016 IPR007435 Protein of unknown function DUF484 PNUC_RS10435 8f466eed451e12daad096cc3d8c52f83 224 PANTHER PTHR38765 1 224 7.4E-19 T 22-04-2016 PNUC_RS03055 275537f6b909e37876439b79a51547ed 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site PNUC_RS03055 275537f6b909e37876439b79a51547ed 67 SUPERFAMILY SSF50249 1 66 3.43E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS03055 275537f6b909e37876439b79a51547ed 67 PIRSF PIRSF002599 1 67 1.4E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 PNUC_RS03055 275537f6b909e37876439b79a51547ed 67 SMART SM00357 3 67 5.4E-27 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 PNUC_RS03055 275537f6b909e37876439b79a51547ed 67 PRINTS PR00050 Cold shock protein signature 25 34 4.03E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PNUC_RS03055 275537f6b909e37876439b79a51547ed 67 PRINTS PR00050 Cold shock protein signature 40 58 4.03E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PNUC_RS03055 275537f6b909e37876439b79a51547ed 67 PRINTS PR00050 Cold shock protein signature 4 19 4.03E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PNUC_RS03055 275537f6b909e37876439b79a51547ed 67 PANTHER PTHR11544 1 67 1.4E-35 T 22-04-2016 PNUC_RS03055 275537f6b909e37876439b79a51547ed 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.3E-28 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PNUC_RS03055 275537f6b909e37876439b79a51547ed 67 Gene3D G3DSA:2.40.50.140 1 66 1.1E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS05085 bd8057ec609df6c6b938f106d0cdbe36 94 Gene3D G3DSA:3.30.70.1500 12 87 6.6E-24 T 22-04-2016 PNUC_RS05085 bd8057ec609df6c6b938f106d0cdbe36 94 PANTHER PTHR12735 12 92 1.9E-24 T 22-04-2016 PNUC_RS05085 bd8057ec609df6c6b938f106d0cdbe36 94 PIRSF PIRSF003113 1 94 5.0E-24 T 22-04-2016 IPR002634 BolA protein PNUC_RS05085 bd8057ec609df6c6b938f106d0cdbe36 94 Pfam PF01722 BolA-like protein 15 91 4.8E-26 T 22-04-2016 IPR002634 BolA protein PNUC_RS05085 bd8057ec609df6c6b938f106d0cdbe36 94 PANTHER PTHR12735:SF24 12 92 1.9E-24 T 22-04-2016 PNUC_RS05085 bd8057ec609df6c6b938f106d0cdbe36 94 SUPERFAMILY SSF82657 9 92 1.83E-23 T 22-04-2016 IPR002634 BolA protein PNUC_RS08885 670d82d82353e40fdd8a8ff30bffc0e6 276 SUPERFAMILY SSF52821 156 275 1.07E-28 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS08885 670d82d82353e40fdd8a8ff30bffc0e6 276 PANTHER PTHR11364:SF0 1 275 4.7E-83 T 22-04-2016 PNUC_RS08885 670d82d82353e40fdd8a8ff30bffc0e6 276 Pfam PF00581 Rhodanese-like domain 156 268 4.4E-9 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS08885 670d82d82353e40fdd8a8ff30bffc0e6 276 Pfam PF00581 Rhodanese-like domain 6 127 1.2E-17 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS08885 670d82d82353e40fdd8a8ff30bffc0e6 276 SMART SM00450 153 272 2.9E-9 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS08885 670d82d82353e40fdd8a8ff30bffc0e6 276 SMART SM00450 5 132 8.1E-16 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS08885 670d82d82353e40fdd8a8ff30bffc0e6 276 ProSitePatterns PS00380 Rhodanese signature 1. 39 50 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 PNUC_RS08885 670d82d82353e40fdd8a8ff30bffc0e6 276 SUPERFAMILY SSF52821 2 139 1.18E-34 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS08885 670d82d82353e40fdd8a8ff30bffc0e6 276 Gene3D G3DSA:3.40.250.10 1 141 2.6E-42 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS08885 670d82d82353e40fdd8a8ff30bffc0e6 276 Gene3D G3DSA:3.40.250.10 152 275 1.1E-30 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS08885 670d82d82353e40fdd8a8ff30bffc0e6 276 PANTHER PTHR11364 1 275 4.7E-83 T 22-04-2016 PNUC_RS09955 712e9b32d9a7836911521ccd269e6cce 321 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 10 319 2.7E-120 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PNUC_RS09955 712e9b32d9a7836911521ccd269e6cce 321 SUPERFAMILY SSF53271 15 100 4.99E-7 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS09955 712e9b32d9a7836911521ccd269e6cce 321 SMART SM01400 9 126 5.5E-74 T 22-04-2016 PNUC_RS09955 712e9b32d9a7836911521ccd269e6cce 321 Gene3D G3DSA:3.40.50.2020 7 165 1.9E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS09955 712e9b32d9a7836911521ccd269e6cce 321 SUPERFAMILY SSF53271 74 310 6.42E-62 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS09955 712e9b32d9a7836911521ccd269e6cce 321 PANTHER PTHR10210 1 319 3.0E-178 T 22-04-2016 PNUC_RS09955 712e9b32d9a7836911521ccd269e6cce 321 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 9 320 47.309 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PNUC_RS09955 712e9b32d9a7836911521ccd269e6cce 321 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 135 150 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 PNUC_RS09955 712e9b32d9a7836911521ccd269e6cce 321 Pfam PF14572 Phosphoribosyl synthetase-associated domain 210 319 2.5E-25 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PNUC_RS09955 712e9b32d9a7836911521ccd269e6cce 321 PANTHER PTHR10210:SF41 1 319 3.0E-178 T 22-04-2016 PNUC_RS09955 712e9b32d9a7836911521ccd269e6cce 321 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 124 1.8E-47 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PNUC_RS09955 712e9b32d9a7836911521ccd269e6cce 321 Gene3D G3DSA:3.40.50.2020 166 294 6.0E-52 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PNUC_RS10595 acbfa3a8dac7d0c814e839539609fd25 149 Pfam PF06577 Protein of unknown function (DUF1134) 29 128 1.3E-7 T 22-04-2016 IPR008325 Uncharacterised conserved protein UCP033924 PNUC_RS02155 2b5685c6c48cd6c91b583a8e35ecdd8a 245 Pfam PF00194 Eukaryotic-type carbonic anhydrase 24 242 1.1E-45 T 22-04-2016 IPR001148 Alpha carbonic anhydrase PNUC_RS02155 2b5685c6c48cd6c91b583a8e35ecdd8a 245 SMART SM01057 25 245 2.0E-94 T 22-04-2016 IPR001148 Alpha carbonic anhydrase PNUC_RS02155 2b5685c6c48cd6c91b583a8e35ecdd8a 245 PANTHER PTHR18952 5 241 1.1E-66 T 22-04-2016 IPR023561 Carbonic anhydrase, alpha-class PNUC_RS02155 2b5685c6c48cd6c91b583a8e35ecdd8a 245 SUPERFAMILY SSF51069 24 241 4.16E-69 T 22-04-2016 IPR001148 Alpha carbonic anhydrase PNUC_RS02155 2b5685c6c48cd6c91b583a8e35ecdd8a 245 Gene3D G3DSA:3.10.200.10 23 242 3.7E-68 T 22-04-2016 IPR001148 Alpha carbonic anhydrase PNUC_RS04335 b6d69de629e9567e459b83911fed895f 348 SUPERFAMILY SSF46589 15 99 1.62E-19 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 PNUC_RS04335 b6d69de629e9567e459b83911fed895f 348 Pfam PF01409 tRNA synthetases class II core domain (F) 92 346 5.0E-95 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 PNUC_RS04335 b6d69de629e9567e459b83911fed895f 348 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 347 1.8E-98 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PNUC_RS04335 b6d69de629e9567e459b83911fed895f 348 Gene3D G3DSA:3.30.930.10 9 347 9.5E-126 T 22-04-2016 PNUC_RS04335 b6d69de629e9567e459b83911fed895f 348 PANTHER PTHR11538 90 348 1.0E-93 T 22-04-2016 PNUC_RS04335 b6d69de629e9567e459b83911fed895f 348 PANTHER PTHR11538 39 52 1.0E-93 T 22-04-2016 PNUC_RS04335 b6d69de629e9567e459b83911fed895f 348 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 6.9E-22 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PNUC_RS04335 b6d69de629e9567e459b83911fed895f 348 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 346 46.988 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 PNUC_RS04335 b6d69de629e9567e459b83911fed895f 348 SUPERFAMILY SSF55681 92 347 3.73E-76 T 22-04-2016 PNUC_RS10235 aa052d600fd689dbd02525b8621a7ef8 204 Gene3D G3DSA:3.30.70.1070 124 202 3.8E-20 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 PNUC_RS10235 aa052d600fd689dbd02525b8621a7ef8 204 SUPERFAMILY SSF110997 126 201 5.23E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 PNUC_RS10235 aa052d600fd689dbd02525b8621a7ef8 204 Pfam PF05036 Sporulation related domain 129 200 8.9E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 PNUC_RS02490 33b36b072a01f8c5ce1e98d27911a425 259 SUPERFAMILY SSF53213 5 257 3.4E-88 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PNUC_RS02490 33b36b072a01f8c5ce1e98d27911a425 259 PANTHER PTHR30096:SF0 1 257 2.1E-90 T 22-04-2016 PNUC_RS02490 33b36b072a01f8c5ce1e98d27911a425 259 Gene3D G3DSA:3.40.830.10 2 258 5.1E-91 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PNUC_RS02490 33b36b072a01f8c5ce1e98d27911a425 259 PANTHER PTHR30096 1 257 2.1E-90 T 22-04-2016 PNUC_RS02490 33b36b072a01f8c5ce1e98d27911a425 259 PIRSF PIRSF006157 1 259 1.7E-87 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 PNUC_RS02490 33b36b072a01f8c5ce1e98d27911a425 259 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 235 6.8E-31 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PNUC_RS01230 8d47f1fe2780708cbcb05937f2e7b7ef 266 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 126 262 2.0E-44 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS01230 8d47f1fe2780708cbcb05937f2e7b7ef 266 PANTHER PTHR20836:SF0 1 264 2.9E-93 T 22-04-2016 PNUC_RS01230 8d47f1fe2780708cbcb05937f2e7b7ef 266 SUPERFAMILY SSF51735 234 264 7.89E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01230 8d47f1fe2780708cbcb05937f2e7b7ef 266 SUPERFAMILY SSF51735 1 124 7.89E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01230 8d47f1fe2780708cbcb05937f2e7b7ef 266 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 263 35.097 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS01230 8d47f1fe2780708cbcb05937f2e7b7ef 266 SUPERFAMILY SSF55347 125 234 7.63E-39 T 22-04-2016 PNUC_RS01230 8d47f1fe2780708cbcb05937f2e7b7ef 266 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 148 165 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS01230 8d47f1fe2780708cbcb05937f2e7b7ef 266 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 263 3.9E-95 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS01230 8d47f1fe2780708cbcb05937f2e7b7ef 266 PIRSF PIRSF000161 1 266 2.1E-86 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS01230 8d47f1fe2780708cbcb05937f2e7b7ef 266 PANTHER PTHR20836 1 264 2.9E-93 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS01230 8d47f1fe2780708cbcb05937f2e7b7ef 266 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 123 2.1E-36 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PNUC_RS01230 8d47f1fe2780708cbcb05937f2e7b7ef 266 Gene3D G3DSA:3.40.50.720 1 161 4.2E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10835 4c1f3de4ad9f0cbfb9c8795c96fff653 498 SUPERFAMILY SSF141130 255 406 2.35E-70 T 22-04-2016 PNUC_RS10835 4c1f3de4ad9f0cbfb9c8795c96fff653 498 SUPERFAMILY SSF141130 66 217 2.35E-70 T 22-04-2016 PNUC_RS10835 4c1f3de4ad9f0cbfb9c8795c96fff653 498 SUPERFAMILY SSF141130 413 490 1.01E-7 T 22-04-2016 PNUC_RS10835 4c1f3de4ad9f0cbfb9c8795c96fff653 498 PANTHER PTHR31891 68 406 1.8E-49 T 22-04-2016 PNUC_RS10835 4c1f3de4ad9f0cbfb9c8795c96fff653 498 Pfam PF03069 Acetamidase/Formamidase family 82 324 4.1E-28 T 22-04-2016 IPR004304 Acetamidase/Formamidase GO:0016811 PNUC_RS10835 4c1f3de4ad9f0cbfb9c8795c96fff653 498 Gene3D G3DSA:2.60.120.580 255 323 2.9E-50 T 22-04-2016 PNUC_RS10835 4c1f3de4ad9f0cbfb9c8795c96fff653 498 Gene3D G3DSA:2.60.120.580 200 218 2.9E-50 T 22-04-2016 PNUC_RS10835 4c1f3de4ad9f0cbfb9c8795c96fff653 498 Gene3D G3DSA:2.60.120.580 61 154 2.9E-50 T 22-04-2016 PNUC_RS10835 4c1f3de4ad9f0cbfb9c8795c96fff653 498 Gene3D G3DSA:3.10.28.20 415 491 1.2E-12 T 22-04-2016 PNUC_RS10835 4c1f3de4ad9f0cbfb9c8795c96fff653 498 Gene3D G3DSA:3.10.28.20 332 407 1.8E-14 T 22-04-2016 PNUC_RS03410 d4157d19dd4ccb982590848e2e2e1e41 183 PANTHER PTHR35011:SF4 7 183 6.4E-57 T 22-04-2016 PNUC_RS03410 d4157d19dd4ccb982590848e2e2e1e41 183 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 162 6.2E-27 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PNUC_RS03410 d4157d19dd4ccb982590848e2e2e1e41 183 PANTHER PTHR35011 7 183 6.4E-57 T 22-04-2016 PNUC_RS00075 58a4baed8e07e3d5d45309d0504deed0 639 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 630 1.2E-268 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 PNUC_RS00075 58a4baed8e07e3d5d45309d0504deed0 639 PANTHER PTHR11806 1 637 0.0 T 22-04-2016 PNUC_RS00075 58a4baed8e07e3d5d45309d0504deed0 639 PANTHER PTHR11806:SF0 1 637 0.0 T 22-04-2016 PNUC_RS00075 58a4baed8e07e3d5d45309d0504deed0 639 Gene3D G3DSA:3.50.50.60 7 231 1.0E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS00075 58a4baed8e07e3d5d45309d0504deed0 639 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 22-04-2016 IPR020595 MnmG-related, conserved site PNUC_RS00075 58a4baed8e07e3d5d45309d0504deed0 639 SMART SM01228 555 626 7.2E-40 T 22-04-2016 PNUC_RS00075 58a4baed8e07e3d5d45309d0504deed0 639 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 22-04-2016 IPR020595 MnmG-related, conserved site PNUC_RS00075 58a4baed8e07e3d5d45309d0504deed0 639 Pfam PF13932 GidA associated domain 403 624 1.2E-69 T 22-04-2016 IPR026904 GidA associated domain 3 PNUC_RS00075 58a4baed8e07e3d5d45309d0504deed0 639 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 633 41.994 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 PNUC_RS00075 58a4baed8e07e3d5d45309d0504deed0 639 SUPERFAMILY SSF51905 6 66 1.27E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS00075 58a4baed8e07e3d5d45309d0504deed0 639 SUPERFAMILY SSF51905 97 262 1.27E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS00075 58a4baed8e07e3d5d45309d0504deed0 639 Pfam PF01134 Glucose inhibited division protein A 8 400 5.1E-166 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 PNUC_RS07140 18fde5f9a9adfc2c72a69bf8971acadc 294 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 8 291 18.635 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 PNUC_RS07140 18fde5f9a9adfc2c72a69bf8971acadc 294 Gene3D G3DSA:3.40.1190.20 18 293 3.2E-67 T 22-04-2016 IPR029056 Ribokinase-like PNUC_RS07140 18fde5f9a9adfc2c72a69bf8971acadc 294 PANTHER PTHR12592:SF0 18 281 2.5E-47 T 22-04-2016 PNUC_RS07140 18fde5f9a9adfc2c72a69bf8971acadc 294 SUPERFAMILY SSF53613 14 293 1.33E-57 T 22-04-2016 IPR029056 Ribokinase-like PNUC_RS07140 18fde5f9a9adfc2c72a69bf8971acadc 294 Pfam PF01256 Carbohydrate kinase 32 270 4.9E-48 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 PNUC_RS07140 18fde5f9a9adfc2c72a69bf8971acadc 294 PANTHER PTHR12592 18 281 2.5E-47 T 22-04-2016 PNUC_RS07140 18fde5f9a9adfc2c72a69bf8971acadc 294 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 18 288 2.9E-53 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 PNUC_RS06760 9b9cc0f61981ba265045368caf93453c 219 PANTHER PTHR38035 3 216 2.6E-17 T 22-04-2016 PNUC_RS06760 9b9cc0f61981ba265045368caf93453c 219 Pfam PF09976 Tetratricopeptide repeat-like domain 15 215 6.4E-47 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain PNUC_RS06760 9b9cc0f61981ba265045368caf93453c 219 PIRSF PIRSF006170 1 219 7.8E-45 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 PNUC_RS03745 dfeb8ac0fa4ad94e7c3159bb082df111 182 SUPERFAMILY SSF52980 2 180 1.88E-71 T 22-04-2016 IPR011335 Restriction endonuclease type II-like PNUC_RS03745 dfeb8ac0fa4ad94e7c3159bb082df111 182 PIRSF PIRSF011484 1 181 3.9E-69 T 22-04-2016 IPR009822 YaeQ PNUC_RS03745 dfeb8ac0fa4ad94e7c3159bb082df111 182 PANTHER PTHR38784:SF1 1 182 2.7E-79 T 22-04-2016 PNUC_RS03745 dfeb8ac0fa4ad94e7c3159bb082df111 182 SMART SM01322 1 176 3.4E-114 T 22-04-2016 IPR009822 YaeQ PNUC_RS03745 dfeb8ac0fa4ad94e7c3159bb082df111 182 PANTHER PTHR38784 1 182 2.7E-79 T 22-04-2016 PNUC_RS03745 dfeb8ac0fa4ad94e7c3159bb082df111 182 Gene3D G3DSA:3.10.640.10 1 180 7.0E-80 T 22-04-2016 PNUC_RS03745 dfeb8ac0fa4ad94e7c3159bb082df111 182 Pfam PF07152 YaeQ protein 1 173 6.7E-76 T 22-04-2016 IPR009822 YaeQ PNUC_RS06230 c1b2d258b205bf91e11d596726b6d5ef 331 SUPERFAMILY SSF53850 35 254 9.32E-29 T 22-04-2016 PNUC_RS06230 c1b2d258b205bf91e11d596726b6d5ef 331 PANTHER PTHR30024 1 263 1.3E-25 T 22-04-2016 PNUC_RS06230 c1b2d258b205bf91e11d596726b6d5ef 331 Gene3D G3DSA:3.40.190.10 141 251 1.6E-12 T 22-04-2016 PNUC_RS06230 c1b2d258b205bf91e11d596726b6d5ef 331 Pfam PF09084 NMT1/THI5 like 50 262 3.8E-13 T 22-04-2016 IPR015168 SsuA/THI5-like PNUC_RS06230 c1b2d258b205bf91e11d596726b6d5ef 331 Gene3D G3DSA:3.40.190.10 59 140 4.1E-4 T 22-04-2016 PNUC_RS10395 235838fdd3f4a84bdeb08413546498c0 441 Gene3D G3DSA:1.20.1250.20 25 220 8.2E-7 T 22-04-2016 PNUC_RS10395 235838fdd3f4a84bdeb08413546498c0 441 Gene3D G3DSA:1.20.1250.20 250 430 7.8E-12 T 22-04-2016 PNUC_RS10395 235838fdd3f4a84bdeb08413546498c0 441 PANTHER PTHR12778 28 428 4.2E-88 T 22-04-2016 PNUC_RS10395 235838fdd3f4a84bdeb08413546498c0 441 SUPERFAMILY SSF103473 23 431 1.7E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS10395 235838fdd3f4a84bdeb08413546498c0 441 Pfam PF07690 Major Facilitator Superfamily 28 389 8.3E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS05440 6ed6014689905af4615cae1721aa42f0 215 PANTHER PTHR33269 6 201 1.5E-56 T 22-04-2016 PNUC_RS05440 6ed6014689905af4615cae1721aa42f0 215 PANTHER PTHR33269:SF1 6 201 1.5E-56 T 22-04-2016 PNUC_RS05440 6ed6014689905af4615cae1721aa42f0 215 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 23 170 1.6E-36 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 PNUC_RS04745 a6e2879d0c4348b041618bd1bfd72b1e 341 Gene3D G3DSA:1.20.5.170 10 58 2.4E-13 T 22-04-2016 PNUC_RS04745 a6e2879d0c4348b041618bd1bfd72b1e 341 Pfam PF03308 ArgK protein 25 304 6.1E-97 T 22-04-2016 PNUC_RS04745 a6e2879d0c4348b041618bd1bfd72b1e 341 SMART SM00382 56 223 9.0E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS04745 a6e2879d0c4348b041618bd1bfd72b1e 341 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 21 334 1.9E-97 T 22-04-2016 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 PNUC_RS04745 a6e2879d0c4348b041618bd1bfd72b1e 341 SUPERFAMILY SSF52540 17 334 6.09E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04745 a6e2879d0c4348b041618bd1bfd72b1e 341 PANTHER PTHR23408:SF17 21 340 1.9E-134 T 22-04-2016 PNUC_RS04745 a6e2879d0c4348b041618bd1bfd72b1e 341 PANTHER PTHR23408 21 340 1.9E-134 T 22-04-2016 PNUC_RS04745 a6e2879d0c4348b041618bd1bfd72b1e 341 Gene3D G3DSA:3.40.50.300 59 267 3.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05135 d881c982510f5296a74db492df4b358e 312 PANTHER PTHR10992 7 299 2.6E-54 T 22-04-2016 PNUC_RS05135 d881c982510f5296a74db492df4b358e 312 PRINTS PR00412 Epoxide hydrolase signature 274 296 1.3E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PNUC_RS05135 d881c982510f5296a74db492df4b358e 312 PRINTS PR00412 Epoxide hydrolase signature 39 57 1.3E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PNUC_RS05135 d881c982510f5296a74db492df4b358e 312 PRINTS PR00412 Epoxide hydrolase signature 121 134 1.3E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PNUC_RS05135 d881c982510f5296a74db492df4b358e 312 PRINTS PR00412 Epoxide hydrolase signature 107 120 1.3E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PNUC_RS05135 d881c982510f5296a74db492df4b358e 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 1.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS05135 d881c982510f5296a74db492df4b358e 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 1.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS05135 d881c982510f5296a74db492df4b358e 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 121 134 1.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS05135 d881c982510f5296a74db492df4b358e 312 SUPERFAMILY SSF53474 6 298 6.64E-70 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS05135 d881c982510f5296a74db492df4b358e 312 PANTHER PTHR10992:SF778 7 299 2.6E-54 T 22-04-2016 PNUC_RS05135 d881c982510f5296a74db492df4b358e 312 Gene3D G3DSA:3.40.50.1820 7 297 1.5E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS05135 d881c982510f5296a74db492df4b358e 312 Pfam PF00561 alpha/beta hydrolase fold 33 158 2.2E-26 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS06740 f571f9cd06b75ef851d0acc4e30ff3e9 387 Gene3D G3DSA:3.40.50.300 173 338 2.6E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06740 f571f9cd06b75ef851d0acc4e30ff3e9 387 SUPERFAMILY SSF52540 172 338 4.66E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06740 f571f9cd06b75ef851d0acc4e30ff3e9 387 PANTHER PTHR10229:SF0 1 337 8.1E-149 T 22-04-2016 PNUC_RS06740 f571f9cd06b75ef851d0acc4e30ff3e9 387 Pfam PF01926 50S ribosome-binding GTPase 175 293 2.2E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS06740 f571f9cd06b75ef851d0acc4e30ff3e9 387 Hamap MF_00900 GTPase HflX [hflX]. 1 348 43.557 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 PNUC_RS06740 f571f9cd06b75ef851d0acc4e30ff3e9 387 Pfam PF16360 GTP-binding GTPase Middle Region 88 167 6.1E-25 T 22-04-2016 IPR032305 GTP-binding protein, middle domain PNUC_RS06740 f571f9cd06b75ef851d0acc4e30ff3e9 387 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 175 195 1.2E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS06740 f571f9cd06b75ef851d0acc4e30ff3e9 387 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 242 260 1.2E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PNUC_RS06740 f571f9cd06b75ef851d0acc4e30ff3e9 387 PANTHER PTHR10229 1 337 8.1E-149 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 PNUC_RS06740 f571f9cd06b75ef851d0acc4e30ff3e9 387 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 1 337 3.4E-136 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 PNUC_RS06740 f571f9cd06b75ef851d0acc4e30ff3e9 387 Pfam PF13167 GTP-binding GTPase N-terminal 1 85 4.2E-26 T 22-04-2016 IPR025121 GTPase HflX, N-terminal PNUC_RS06740 f571f9cd06b75ef851d0acc4e30ff3e9 387 PIRSF PIRSF006809 1 359 3.1E-133 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 PNUC_RS02870 ebbb46256a830ad8066456d234b6a081 144 SUPERFAMILY SSF143744 2 136 1.7E-32 T 22-04-2016 PNUC_RS02870 ebbb46256a830ad8066456d234b6a081 144 PANTHER PTHR34309 1 143 2.1E-50 T 22-04-2016 PNUC_RS02870 ebbb46256a830ad8066456d234b6a081 144 PANTHER PTHR34309:SF3 1 143 2.1E-50 T 22-04-2016 PNUC_RS02870 ebbb46256a830ad8066456d234b6a081 144 Pfam PF03928 Haem-degrading 4 133 7.8E-24 T 22-04-2016 IPR005624 Haem-degrading PNUC_RS00805 ded01b6d699fc4d97fbf71ec1c166ebb 501 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 25 489 2.0E-164 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PNUC_RS00805 ded01b6d699fc4d97fbf71ec1c166ebb 501 PANTHER PTHR11236:SF9 1 493 2.8E-216 T 22-04-2016 PNUC_RS00805 ded01b6d699fc4d97fbf71ec1c166ebb 501 SUPERFAMILY SSF56322 14 490 1.57E-151 T 22-04-2016 IPR005801 ADC synthase GO:0009058 PNUC_RS00805 ded01b6d699fc4d97fbf71ec1c166ebb 501 Pfam PF00425 chorismate binding enzyme 225 481 2.0E-94 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PNUC_RS00805 ded01b6d699fc4d97fbf71ec1c166ebb 501 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 175 8.0E-31 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PNUC_RS00805 ded01b6d699fc4d97fbf71ec1c166ebb 501 Gene3D G3DSA:3.60.120.10 13 492 1.3E-168 T 22-04-2016 IPR005801 ADC synthase GO:0009058 PNUC_RS00805 ded01b6d699fc4d97fbf71ec1c166ebb 501 PANTHER PTHR11236 1 493 2.8E-216 T 22-04-2016 PNUC_RS00805 ded01b6d699fc4d97fbf71ec1c166ebb 501 PRINTS PR00095 Anthranilate synthase component I signature 438 452 2.7E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PNUC_RS00805 ded01b6d699fc4d97fbf71ec1c166ebb 501 PRINTS PR00095 Anthranilate synthase component I signature 343 356 2.7E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PNUC_RS00805 ded01b6d699fc4d97fbf71ec1c166ebb 501 PRINTS PR00095 Anthranilate synthase component I signature 329 342 2.7E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PNUC_RS00805 ded01b6d699fc4d97fbf71ec1c166ebb 501 PRINTS PR00095 Anthranilate synthase component I signature 423 437 2.7E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PNUC_RS06985 602115ae6bd2cf47865ca27004720aed 207 SUPERFAMILY SSF50475 11 191 1.86E-32 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PNUC_RS06985 602115ae6bd2cf47865ca27004720aed 207 Pfam PF04299 Putative FMN-binding domain 1 165 1.2E-57 T 22-04-2016 IPR007396 Transcriptional regulator PAI 2-type PNUC_RS06985 602115ae6bd2cf47865ca27004720aed 207 PANTHER PTHR35802:SF1 2 204 4.5E-57 T 22-04-2016 PNUC_RS06985 602115ae6bd2cf47865ca27004720aed 207 Gene3D G3DSA:2.30.110.10 1 205 2.0E-71 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PNUC_RS06985 602115ae6bd2cf47865ca27004720aed 207 PANTHER PTHR35802 2 204 4.5E-57 T 22-04-2016 PNUC_RS06985 602115ae6bd2cf47865ca27004720aed 207 PIRSF PIRSF010372 1 207 2.7E-63 T 22-04-2016 IPR007396 Transcriptional regulator PAI 2-type PNUC_RS09820 f808b4105d7d0c3133d456cec0a274dc 528 PANTHER PTHR10566:SF79 1 445 4.6E-212 T 22-04-2016 PNUC_RS09820 f808b4105d7d0c3133d456cec0a274dc 528 SUPERFAMILY SSF56112 91 162 1.1E-38 T 22-04-2016 IPR011009 Protein kinase-like domain PNUC_RS09820 f808b4105d7d0c3133d456cec0a274dc 528 SUPERFAMILY SSF56112 197 440 1.1E-38 T 22-04-2016 IPR011009 Protein kinase-like domain PNUC_RS09820 f808b4105d7d0c3133d456cec0a274dc 528 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 5 446 7.8E-164 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 PNUC_RS09820 f808b4105d7d0c3133d456cec0a274dc 528 PANTHER PTHR10566 1 445 4.6E-212 T 22-04-2016 PNUC_RS09820 f808b4105d7d0c3133d456cec0a274dc 528 Gene3D G3DSA:3.90.1200.10 264 322 6.6E-5 T 22-04-2016 PNUC_RS09820 f808b4105d7d0c3133d456cec0a274dc 528 Pfam PF03109 ABC1 family 109 235 2.4E-28 T 22-04-2016 IPR004147 UbiB domain PNUC_RS06530 919a1e217fcb50d4cf791dbc4c582b15 330 PANTHER PTHR30349 13 294 9.0E-82 T 22-04-2016 PNUC_RS06530 919a1e217fcb50d4cf791dbc4c582b15 330 PANTHER PTHR30349:SF1 13 294 9.0E-82 T 22-04-2016 PNUC_RS06530 919a1e217fcb50d4cf791dbc4c582b15 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 326 6.2E-77 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS06530 919a1e217fcb50d4cf791dbc4c582b15 330 SUPERFAMILY SSF53850 116 288 4.56E-14 T 22-04-2016 PNUC_RS06530 919a1e217fcb50d4cf791dbc4c582b15 330 PIRSF PIRSF017082 1 330 9.0E-75 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 SUPERFAMILY SSF56784 1 226 3.86E-46 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 3 205 4.9E-59 T 22-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 5 190 2.4E-22 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 84 199 5.9E-17 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 PANTHER PTHR12725 3 203 5.1E-27 T 22-04-2016 PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 161 181 1.6E-23 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 1.6E-23 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 201 1.6E-23 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.6E-23 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 1.6E-23 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 PANTHER PTHR12725:SF58 3 203 5.1E-27 T 22-04-2016 PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 Gene3D G3DSA:1.10.150.240 16 90 5.3E-25 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PNUC_RS10585 37a14fb45fadc832a361e9d96f5e4617 227 Gene3D G3DSA:3.40.50.1000 91 226 5.7E-34 T 22-04-2016 IPR023214 HAD-like domain PNUC_RS02705 2e1dcee70911dd59bf204425a2d2741d 248 PANTHER PTHR32125:SF1 1 232 6.9E-96 T 22-04-2016 PNUC_RS02705 2e1dcee70911dd59bf204425a2d2741d 248 PIRSF PIRSF000386 1 247 3.0E-84 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PNUC_RS02705 2e1dcee70911dd59bf204425a2d2741d 248 Gene3D G3DSA:3.40.1280.10 1 164 1.7E-56 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PNUC_RS02705 2e1dcee70911dd59bf204425a2d2741d 248 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 248 97.677 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PNUC_RS02705 2e1dcee70911dd59bf204425a2d2741d 248 SUPERFAMILY SSF75217 1 235 2.88E-88 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PNUC_RS02705 2e1dcee70911dd59bf204425a2d2741d 248 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 2.1E-50 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PNUC_RS02705 2e1dcee70911dd59bf204425a2d2741d 248 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 232 1.4E-82 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PNUC_RS02705 2e1dcee70911dd59bf204425a2d2741d 248 Gene3D G3DSA:1.10.1270.20 166 247 2.3E-30 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PNUC_RS02705 2e1dcee70911dd59bf204425a2d2741d 248 PANTHER PTHR32125 1 232 6.9E-96 T 22-04-2016 PNUC_RS02055 cd78f53eb4b454790e1b31fac2af12d1 315 Pfam PF01343 Peptidase family S49 130 272 2.9E-38 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PNUC_RS02055 cd78f53eb4b454790e1b31fac2af12d1 315 PANTHER PTHR30341:SF1 15 301 4.7E-80 T 22-04-2016 PNUC_RS02055 cd78f53eb4b454790e1b31fac2af12d1 315 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 67 270 4.7E-47 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 PNUC_RS02055 cd78f53eb4b454790e1b31fac2af12d1 315 Gene3D G3DSA:3.90.226.10 206 292 3.5E-44 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS02055 cd78f53eb4b454790e1b31fac2af12d1 315 Gene3D G3DSA:3.90.226.10 48 168 3.5E-44 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS02055 cd78f53eb4b454790e1b31fac2af12d1 315 SUPERFAMILY SSF52096 205 265 6.73E-38 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS02055 cd78f53eb4b454790e1b31fac2af12d1 315 SUPERFAMILY SSF52096 47 176 6.73E-38 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS02055 cd78f53eb4b454790e1b31fac2af12d1 315 PANTHER PTHR30341 15 301 4.7E-80 T 22-04-2016 PNUC_RS06000 1f0925710938ae70fd9b98ad372747ae 234 Gene3D G3DSA:3.30.1150.10 136 234 6.8E-8 T 22-04-2016 PNUC_RS06000 1f0925710938ae70fd9b98ad372747ae 234 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 157 233 9.2E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 PNUC_RS06000 1f0925710938ae70fd9b98ad372747ae 234 PANTHER PTHR33446 72 234 1.1E-15 T 22-04-2016 PNUC_RS06000 1f0925710938ae70fd9b98ad372747ae 234 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 156 232 1.2E-17 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 PNUC_RS06000 1f0925710938ae70fd9b98ad372747ae 234 SUPERFAMILY SSF74653 156 230 6.93E-18 T 22-04-2016 PNUC_RS10350 68389d49a0055ecb8bd4ff139b85c115 208 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 10 203 1.6E-28 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PNUC_RS10350 68389d49a0055ecb8bd4ff139b85c115 208 Gene3D G3DSA:3.40.50.10420 10 206 3.7E-36 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PNUC_RS10350 68389d49a0055ecb8bd4ff139b85c115 208 PIRSF PIRSF006806 5 205 1.1E-25 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PNUC_RS10350 68389d49a0055ecb8bd4ff139b85c115 208 SUPERFAMILY SSF100950 11 207 7.25E-34 T 22-04-2016 PNUC_RS10350 68389d49a0055ecb8bd4ff139b85c115 208 PANTHER PTHR23407 1 207 4.1E-21 T 22-04-2016 PNUC_RS10350 68389d49a0055ecb8bd4ff139b85c115 208 PANTHER PTHR23407:SF1 1 207 4.1E-21 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PNUC_RS10350 68389d49a0055ecb8bd4ff139b85c115 208 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 203 6.3E-19 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 Gene3D G3DSA:3.90.226.10 58 273 1.7E-48 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 1.2E-65 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 2.9E-144 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 2.0E-44 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 2.0E-44 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 2.0E-44 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 2.0E-44 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 2.0E-44 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 2.0E-44 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 PANTHER PTHR22855 1 319 2.7E-118 T 22-04-2016 PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 48.924 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 PANTHER PTHR22855:SF42 1 319 2.7E-118 T 22-04-2016 PNUC_RS04470 fd4d74dc2cd8fae159fdbe52b6e627af 323 SUPERFAMILY SSF52096 5 316 3.58E-101 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS09420 7f1a7e5e393a420892d59a4753563cc8 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PNUC_RS09420 7f1a7e5e393a420892d59a4753563cc8 354 PANTHER PTHR30304 1 349 1.6E-120 T 22-04-2016 PNUC_RS09420 7f1a7e5e393a420892d59a4753563cc8 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 1.3E-100 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PNUC_RS09420 7f1a7e5e393a420892d59a4753563cc8 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PNUC_RS09420 7f1a7e5e393a420892d59a4753563cc8 354 Gene3D G3DSA:3.20.20.70 1 335 6.0E-110 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS09420 7f1a7e5e393a420892d59a4753563cc8 354 SUPERFAMILY SSF51569 1 329 6.01E-105 T 22-04-2016 PNUC_RS09420 7f1a7e5e393a420892d59a4753563cc8 354 PIRSF PIRSF001359 1 329 1.5E-83 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PNUC_RS09420 7f1a7e5e393a420892d59a4753563cc8 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 5.5E-182 T 22-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 PNUC_RS09420 7f1a7e5e393a420892d59a4753563cc8 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 328 3.0E-95 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PNUC_RS09400 a07483ced9be77b0efaea2cee62fd268 362 PANTHER PTHR17490:SF3 14 354 1.3E-79 T 22-04-2016 PNUC_RS09400 a07483ced9be77b0efaea2cee62fd268 362 Pfam PF01300 Telomere recombination 20 208 2.5E-51 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 PNUC_RS09400 a07483ced9be77b0efaea2cee62fd268 362 PANTHER PTHR17490 14 354 1.3E-79 T 22-04-2016 PNUC_RS09400 a07483ced9be77b0efaea2cee62fd268 362 SUPERFAMILY SSF55821 12 216 2.35E-56 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PNUC_RS09400 a07483ced9be77b0efaea2cee62fd268 362 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 9 211 1.9E-53 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 PNUC_RS09400 a07483ced9be77b0efaea2cee62fd268 362 PIRSF PIRSF004930 2 352 4.1E-95 T 22-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 PNUC_RS09400 a07483ced9be77b0efaea2cee62fd268 362 Gene3D G3DSA:3.90.870.10 13 214 1.4E-70 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PNUC_RS09400 a07483ced9be77b0efaea2cee62fd268 362 Pfam PF03481 Putative GTP-binding controlling metal-binding 234 349 2.2E-14 T 22-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 SUPERFAMILY SSF109998 259 443 8.11E-45 T 22-04-2016 IPR027304 Trigger factor/SurA domain PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 274 424 5.6E-33 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 3.4E-29 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 Gene3D G3DSA:3.10.50.40 165 222 2.9E-8 T 22-04-2016 PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 Gene3D G3DSA:1.10.3120.10 223 403 2.1E-55 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 SUPERFAMILY SSF102735 1 130 1.11E-27 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 SUPERFAMILY SSF54534 89 251 2.75E-28 T 22-04-2016 PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 PIRSF PIRSF003095 1 445 4.9E-109 T 22-04-2016 IPR005215 Trigger factor GO:0015031 PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 167 248 8.4E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 Hamap MF_00303 Trigger factor [tig]. 1 432 18.959 T 22-04-2016 IPR005215 Trigger factor GO:0015031 PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 TIGRFAM TIGR00115 tig: trigger factor 13 424 1.8E-114 T 22-04-2016 IPR005215 Trigger factor GO:0015031 PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 PANTHER PTHR30560 1 444 5.6E-94 T 22-04-2016 PNUC_RS04860 b0ef53b39a4690fa8c6f81bc16f5f58a 445 Gene3D G3DSA:3.30.70.1050 1 117 3.7E-25 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PNUC_RS08380 0fa146395f82fcccbe718b9512b27334 89 Pfam PF10985 Protein of unknown function (DUF2805) 15 85 2.8E-34 T 22-04-2016 IPR019882 Conserved hypothetical protein CHP03643 PNUC_RS08380 0fa146395f82fcccbe718b9512b27334 89 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 13 83 6.0E-35 T 22-04-2016 IPR019882 Conserved hypothetical protein CHP03643 PNUC_RS02045 edb17d56681f31f5fb010838bc36fddd 339 SUPERFAMILY SSF55174 30 81 2.88E-9 T 22-04-2016 PNUC_RS02045 edb17d56681f31f5fb010838bc36fddd 339 Pfam PF01479 S4 domain 31 77 1.0E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS02045 edb17d56681f31f5fb010838bc36fddd 339 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 27 331 3.9E-70 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS02045 edb17d56681f31f5fb010838bc36fddd 339 SMART SM00363 31 89 1.5E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS02045 edb17d56681f31f5fb010838bc36fddd 339 Pfam PF00849 RNA pseudouridylate synthase 118 271 4.2E-27 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS02045 edb17d56681f31f5fb010838bc36fddd 339 PANTHER PTHR11079 110 329 8.9E-107 T 22-04-2016 PNUC_RS02045 edb17d56681f31f5fb010838bc36fddd 339 PANTHER PTHR11079 12 90 8.9E-107 T 22-04-2016 PNUC_RS02045 edb17d56681f31f5fb010838bc36fddd 339 Gene3D G3DSA:3.10.290.10 31 79 2.3E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS02045 edb17d56681f31f5fb010838bc36fddd 339 SUPERFAMILY SSF55120 106 333 1.26E-58 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS02045 edb17d56681f31f5fb010838bc36fddd 339 PANTHER PTHR11079:SF84 110 329 8.9E-107 T 22-04-2016 PNUC_RS02045 edb17d56681f31f5fb010838bc36fddd 339 PANTHER PTHR11079:SF84 12 90 8.9E-107 T 22-04-2016 PNUC_RS02045 edb17d56681f31f5fb010838bc36fddd 339 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 156 170 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS08465 02f91e8c28a9b10bf547961d4a712bc0 175 Gene3D G3DSA:2.60.40.200 36 175 6.5E-48 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS08465 02f91e8c28a9b10bf547961d4a712bc0 175 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 163 174 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 PNUC_RS08465 02f91e8c28a9b10bf547961d4a712bc0 175 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 41 174 1.4E-41 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS08465 02f91e8c28a9b10bf547961d4a712bc0 175 PANTHER PTHR10003 4 174 8.3E-40 T 22-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 PNUC_RS08465 02f91e8c28a9b10bf547961d4a712bc0 175 SUPERFAMILY SSF49329 36 175 1.16E-42 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS08465 02f91e8c28a9b10bf547961d4a712bc0 175 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 73 95 5.7E-6 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS08465 02f91e8c28a9b10bf547961d4a712bc0 175 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 110 119 5.7E-6 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS08465 02f91e8c28a9b10bf547961d4a712bc0 175 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 130 152 5.7E-6 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PNUC_RS08465 02f91e8c28a9b10bf547961d4a712bc0 175 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 73 83 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 PNUC_RS09310 6cb6fd062eb2c4c373e3b08aa9111cfc 449 PANTHER PTHR23417:SF2 144 154 1.6E-71 T 22-04-2016 PNUC_RS09310 6cb6fd062eb2c4c373e3b08aa9111cfc 449 PANTHER PTHR23417:SF2 204 449 1.6E-71 T 22-04-2016 PNUC_RS09310 6cb6fd062eb2c4c373e3b08aa9111cfc 449 SUPERFAMILY SSF53756 68 442 1.26E-12 T 22-04-2016 PNUC_RS09310 6cb6fd062eb2c4c373e3b08aa9111cfc 449 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 44 222 4.9E-55 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 PNUC_RS09310 6cb6fd062eb2c4c373e3b08aa9111cfc 449 PANTHER PTHR23417 144 154 1.6E-71 T 22-04-2016 PNUC_RS09310 6cb6fd062eb2c4c373e3b08aa9111cfc 449 PANTHER PTHR23417 10 125 1.6E-71 T 22-04-2016 PNUC_RS09310 6cb6fd062eb2c4c373e3b08aa9111cfc 449 PANTHER PTHR23417 204 449 1.6E-71 T 22-04-2016 PNUC_RS09310 6cb6fd062eb2c4c373e3b08aa9111cfc 449 Gene3D G3DSA:3.40.50.2000 322 424 5.9E-7 T 22-04-2016 PNUC_RS09310 6cb6fd062eb2c4c373e3b08aa9111cfc 449 PANTHER PTHR23417:SF2 10 125 1.6E-71 T 22-04-2016 PNUC_RS06400 4a48b50412f24ddee6b711ffcac097f2 1135 PANTHER PTHR33490 1 508 3.9E-236 T 22-04-2016 PNUC_RS06400 4a48b50412f24ddee6b711ffcac097f2 1135 SUPERFAMILY SSF54001 8 336 9.39E-74 T 22-04-2016 PNUC_RS06400 4a48b50412f24ddee6b711ffcac097f2 1135 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 275 1134 0.0 T 22-04-2016 IPR018667 Domain of unknown function DUF2126 PNUC_RS06400 4a48b50412f24ddee6b711ffcac097f2 1135 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 82 2.5E-26 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal PNUC_RS06400 4a48b50412f24ddee6b711ffcac097f2 1135 PANTHER PTHR33490:SF1 1 508 3.9E-236 T 22-04-2016 PNUC_RS06400 4a48b50412f24ddee6b711ffcac097f2 1135 SMART SM00460 171 247 1.1E-19 T 22-04-2016 IPR002931 Transglutaminase-like PNUC_RS06400 4a48b50412f24ddee6b711ffcac097f2 1135 Gene3D G3DSA:3.90.260.10 176 247 1.7E-9 T 22-04-2016 IPR002931 Transglutaminase-like PNUC_RS06400 4a48b50412f24ddee6b711ffcac097f2 1135 Pfam PF01841 Transglutaminase-like superfamily 133 245 1.0E-19 T 22-04-2016 IPR002931 Transglutaminase-like PNUC_RS02335 4e6a77b999a247ef1624276f90d4b6de 532 PANTHER PTHR11686:SF8 8 532 3.5E-158 T 22-04-2016 PNUC_RS02335 4e6a77b999a247ef1624276f90d4b6de 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 253 272 4.7E-23 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS02335 4e6a77b999a247ef1624276f90d4b6de 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 346 364 4.7E-23 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS02335 4e6a77b999a247ef1624276f90d4b6de 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 401 416 4.7E-23 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS02335 4e6a77b999a247ef1624276f90d4b6de 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 224 240 4.7E-23 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS02335 4e6a77b999a247ef1624276f90d4b6de 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 126 145 4.7E-23 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS02335 4e6a77b999a247ef1624276f90d4b6de 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 370 388 4.7E-23 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS02335 4e6a77b999a247ef1624276f90d4b6de 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 31 56 4.7E-23 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS02335 4e6a77b999a247ef1624276f90d4b6de 532 SUPERFAMILY SSF56235 3 530 7.91E-148 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS02335 4e6a77b999a247ef1624276f90d4b6de 532 Pfam PF01019 Gamma-glutamyltranspeptidase 24 527 9.1E-128 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS02335 4e6a77b999a247ef1624276f90d4b6de 532 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 9 524 1.2E-108 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS02335 4e6a77b999a247ef1624276f90d4b6de 532 PANTHER PTHR11686 8 532 3.5E-158 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS06075 c0f1454c5e8b41c4f13cf32ea6142b09 109 SUPERFAMILY SSF81296 5 107 5.04E-24 T 22-04-2016 IPR014756 Immunoglobulin E-set PNUC_RS06075 c0f1454c5e8b41c4f13cf32ea6142b09 109 Pfam PF08770 Sulphur oxidation protein SoxZ 14 100 1.6E-22 T 22-04-2016 IPR014880 Sulphur oxidation protein SoxZ PNUC_RS06075 c0f1454c5e8b41c4f13cf32ea6142b09 109 Gene3D G3DSA:2.60.40.10 6 108 3.8E-24 T 22-04-2016 IPR013783 Immunoglobulin-like fold PNUC_RS06050 2f815b283f6d9190949f4c0803135406 819 Pfam PF01804 Penicillin amidase 55 810 1.6E-212 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 PNUC_RS06050 2f815b283f6d9190949f4c0803135406 819 Gene3D G3DSA:3.60.20.10 433 664 1.4E-100 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS06050 2f815b283f6d9190949f4c0803135406 819 Gene3D G3DSA:3.60.20.10 273 348 1.4E-100 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS06050 2f815b283f6d9190949f4c0803135406 819 PANTHER PTHR34218:SF2 1 818 3.7E-230 T 22-04-2016 PNUC_RS06050 2f815b283f6d9190949f4c0803135406 819 SUPERFAMILY SSF56235 51 812 6.95E-219 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS06050 2f815b283f6d9190949f4c0803135406 819 Gene3D G3DSA:1.10.439.10 45 209 2.2E-53 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 PNUC_RS06050 2f815b283f6d9190949f4c0803135406 819 PIRSF PIRSF001227 14 816 1.7E-182 T 22-04-2016 IPR014395 Penicillin acylase GO:0016811 PNUC_RS06050 2f815b283f6d9190949f4c0803135406 819 PANTHER PTHR34218 1 818 3.7E-230 T 22-04-2016 PNUC_RS06050 2f815b283f6d9190949f4c0803135406 819 Gene3D G3DSA:2.30.120.10 349 423 1.7E-20 T 22-04-2016 PNUC_RS03290 5d8e2fbe64ddea46641d677b768a8bbc 450 PANTHER PTHR33362:SF6 3 447 5.9E-161 T 22-04-2016 PNUC_RS03290 5d8e2fbe64ddea46641d677b768a8bbc 450 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 436 2.4E-93 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PNUC_RS03290 5d8e2fbe64ddea46641d677b768a8bbc 450 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 439 1.6E-99 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 PNUC_RS03290 5d8e2fbe64ddea46641d677b768a8bbc 450 PIRSF PIRSF006066 4 448 3.6E-90 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 PNUC_RS03290 5d8e2fbe64ddea46641d677b768a8bbc 450 PANTHER PTHR33362 3 447 5.9E-161 T 22-04-2016 PNUC_RS03535 7e9b741fedbc65daa4a9156fc0d33781 417 SUPERFAMILY SSF50939 64 350 6.78E-18 T 22-04-2016 IPR011040 Sialidases PNUC_RS03535 7e9b741fedbc65daa4a9156fc0d33781 417 Gene3D G3DSA:2.120.10.10 64 245 1.2E-15 T 22-04-2016 IPR011040 Sialidases PNUC_RS03535 7e9b741fedbc65daa4a9156fc0d33781 417 Gene3D G3DSA:2.120.10.10 281 398 6.4E-11 T 22-04-2016 IPR011040 Sialidases PNUC_RS07240 af1188ccf2f96f34ef5b294e4a0c92b7 276 Gene3D G3DSA:3.40.30.10 86 272 1.9E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS07240 af1188ccf2f96f34ef5b294e4a0c92b7 276 SUPERFAMILY SSF52833 87 268 5.71E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS07240 af1188ccf2f96f34ef5b294e4a0c92b7 276 Pfam PF13462 Thioredoxin 92 248 3.7E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS07240 af1188ccf2f96f34ef5b294e4a0c92b7 276 PANTHER PTHR13887 86 243 5.8E-28 T 22-04-2016 PNUC_RS07100 a63694689549c963530ee4be205a943b 129 Pfam PF01152 Bacterial-like globin 6 125 5.2E-36 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 PNUC_RS07100 a63694689549c963530ee4be205a943b 129 PANTHER PTHR10681 1 106 1.8E-13 T 22-04-2016 PNUC_RS07100 a63694689549c963530ee4be205a943b 129 Gene3D G3DSA:1.10.490.10 5 128 4.2E-38 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 PNUC_RS07100 a63694689549c963530ee4be205a943b 129 SUPERFAMILY SSF46458 6 127 3.7E-34 T 22-04-2016 IPR009050 Globin-like PNUC_RS10630 3f911c1d25c0e93b71cce9e10054c1ee 297 PANTHER PTHR30126:SF5 3 285 4.5E-100 T 22-04-2016 PNUC_RS10630 3f911c1d25c0e93b71cce9e10054c1ee 297 Pfam PF03466 LysR substrate binding domain 90 293 5.5E-43 T 22-04-2016 IPR005119 LysR, substrate-binding PNUC_RS10630 3f911c1d25c0e93b71cce9e10054c1ee 297 PANTHER PTHR30126 3 285 4.5E-100 T 22-04-2016 PNUC_RS10630 3f911c1d25c0e93b71cce9e10054c1ee 297 SUPERFAMILY SSF46785 3 103 2.0E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS10630 3f911c1d25c0e93b71cce9e10054c1ee 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PNUC_RS10630 3f911c1d25c0e93b71cce9e10054c1ee 297 Gene3D G3DSA:1.10.10.10 3 88 5.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS10630 3f911c1d25c0e93b71cce9e10054c1ee 297 SUPERFAMILY SSF53850 92 296 4.98E-38 T 22-04-2016 PNUC_RS10630 3f911c1d25c0e93b71cce9e10054c1ee 297 Gene3D G3DSA:3.40.190.10 176 261 3.3E-21 T 22-04-2016 PNUC_RS10630 3f911c1d25c0e93b71cce9e10054c1ee 297 Gene3D G3DSA:3.40.190.10 92 175 3.1E-15 T 22-04-2016 PNUC_RS10765 bca76b5bd0968ff8a4145cc5c0b7c4cd 332 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 318 8.6E-82 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS10765 bca76b5bd0968ff8a4145cc5c0b7c4cd 332 Pfam PF00551 Formyl transferase 1 194 9.5E-37 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS10765 bca76b5bd0968ff8a4145cc5c0b7c4cd 332 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 322 34.04 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS10765 bca76b5bd0968ff8a4145cc5c0b7c4cd 332 Gene3D G3DSA:3.10.25.10 222 320 2.4E-27 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS10765 bca76b5bd0968ff8a4145cc5c0b7c4cd 332 SUPERFAMILY SSF53328 1 220 2.09E-56 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS10765 bca76b5bd0968ff8a4145cc5c0b7c4cd 332 Gene3D G3DSA:3.40.50.170 1 220 8.6E-70 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS10765 bca76b5bd0968ff8a4145cc5c0b7c4cd 332 SUPERFAMILY SSF50486 222 320 5.02E-26 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 PNUC_RS10765 bca76b5bd0968ff8a4145cc5c0b7c4cd 332 Pfam PF02911 Formyl transferase, C-terminal domain 219 318 1.9E-23 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS10765 bca76b5bd0968ff8a4145cc5c0b7c4cd 332 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 147 170 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS10765 bca76b5bd0968ff8a4145cc5c0b7c4cd 332 PANTHER PTHR11138 1 313 2.1E-97 T 22-04-2016 PNUC_RS06295 93173796ef88bcb4481ca6c3526ed334 230 SUPERFAMILY SSF52540 2 218 6.37E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06295 93173796ef88bcb4481ca6c3526ed334 230 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 230 1.1E-100 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE PNUC_RS06295 93173796ef88bcb4481ca6c3526ed334 230 PANTHER PTHR24220 3 230 5.5E-122 T 22-04-2016 PNUC_RS06295 93173796ef88bcb4481ca6c3526ed334 230 SMART SM00382 26 209 3.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS06295 93173796ef88bcb4481ca6c3526ed334 230 Pfam PF00005 ABC transporter 17 159 9.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS06295 93173796ef88bcb4481ca6c3526ed334 230 PANTHER PTHR24220:SF404 3 230 5.5E-122 T 22-04-2016 PNUC_RS06295 93173796ef88bcb4481ca6c3526ed334 230 Gene3D G3DSA:3.40.50.300 1 219 1.6E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06525 0ba9377a257b34cd3b228dfe4ed6ef07 282 PANTHER PTHR32308 14 278 3.1E-69 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like PNUC_RS06525 0ba9377a257b34cd3b228dfe4ed6ef07 282 Gene3D G3DSA:3.20.20.60 14 232 1.1E-59 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS06525 0ba9377a257b34cd3b228dfe4ed6ef07 282 SUPERFAMILY SSF51621 14 233 2.23E-54 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS06525 0ba9377a257b34cd3b228dfe4ed6ef07 282 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 221 8.2E-36 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PNUC_RS06525 0ba9377a257b34cd3b228dfe4ed6ef07 282 PANTHER PTHR32308:SF0 14 278 3.1E-69 T 22-04-2016 PNUC_RS06525 0ba9377a257b34cd3b228dfe4ed6ef07 282 PIRSF PIRSF015582 11 282 5.7E-72 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like PNUC_RS04795 0108380f3109b1d1f4c94dc887760bcb 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 2 291 2.5E-84 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS04795 0108380f3109b1d1f4c94dc887760bcb 318 SUPERFAMILY SSF55120 65 299 9.66E-70 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS04795 0108380f3109b1d1f4c94dc887760bcb 318 SMART SM00363 4 69 0.0014 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS04795 0108380f3109b1d1f4c94dc887760bcb 318 PANTHER PTHR11079:SF73 2 306 2.4E-112 T 22-04-2016 PNUC_RS04795 0108380f3109b1d1f4c94dc887760bcb 318 Pfam PF01479 S4 domain 4 48 3.9E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS04795 0108380f3109b1d1f4c94dc887760bcb 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 121 135 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS04795 0108380f3109b1d1f4c94dc887760bcb 318 PANTHER PTHR11079 2 306 2.4E-112 T 22-04-2016 PNUC_RS04795 0108380f3109b1d1f4c94dc887760bcb 318 Pfam PF00849 RNA pseudouridylate synthase 79 232 8.2E-33 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS04795 0108380f3109b1d1f4c94dc887760bcb 318 Gene3D G3DSA:3.10.290.10 4 52 1.1E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PNUC_RS04795 0108380f3109b1d1f4c94dc887760bcb 318 SUPERFAMILY SSF55174 4 54 2.02E-8 T 22-04-2016 PNUC_RS01200 eb4943fee09692c14885c2ab4f8a3e75 206 Gene3D G3DSA:3.30.370.10 106 197 7.4E-18 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) PNUC_RS01200 eb4943fee09692c14885c2ab4f8a3e75 206 SUPERFAMILY SSF52038 107 198 1.41E-12 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) PNUC_RS01200 eb4943fee09692c14885c2ab4f8a3e75 206 Pfam PF01337 Barstar (barnase inhibitor) 111 195 3.9E-16 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) PNUC_RS07750 765c0e658bf8917bdaaf2820e9969e94 307 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 307 6.1E-120 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PNUC_RS07750 765c0e658bf8917bdaaf2820e9969e94 307 Gene3D G3DSA:3.40.50.620 248 256 7.3E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS07750 765c0e658bf8917bdaaf2820e9969e94 307 Gene3D G3DSA:3.40.50.620 3 215 7.3E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS07750 765c0e658bf8917bdaaf2820e9969e94 307 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 260 4.9E-46 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 PNUC_RS07750 765c0e658bf8917bdaaf2820e9969e94 307 SUPERFAMILY SSF52402 9 214 1.94E-62 T 22-04-2016 PNUC_RS07750 765c0e658bf8917bdaaf2820e9969e94 307 PIRSF PIRSF002936 1 307 8.0E-135 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PNUC_RS07750 765c0e658bf8917bdaaf2820e9969e94 307 PANTHER PTHR23293 183 216 1.9E-67 T 22-04-2016 PNUC_RS07750 765c0e658bf8917bdaaf2820e9969e94 307 PANTHER PTHR23293 9 163 1.9E-67 T 22-04-2016 PNUC_RS07750 765c0e658bf8917bdaaf2820e9969e94 307 PANTHER PTHR23293 249 307 1.9E-67 T 22-04-2016 PNUC_RS07750 765c0e658bf8917bdaaf2820e9969e94 307 PANTHER PTHR23293:SF6 183 216 1.9E-67 T 22-04-2016 PNUC_RS07750 765c0e658bf8917bdaaf2820e9969e94 307 PANTHER PTHR23293:SF6 9 163 1.9E-67 T 22-04-2016 PNUC_RS07750 765c0e658bf8917bdaaf2820e9969e94 307 PANTHER PTHR23293:SF6 249 307 1.9E-67 T 22-04-2016 PNUC_RS05410 22c0f8675395d5487326dc1e79c070e2 163 PIRSF PIRSF032131 1 160 6.6E-38 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 PNUC_RS05410 22c0f8675395d5487326dc1e79c070e2 163 Pfam PF06676 Protein of unknown function (DUF1178) 1 156 2.3E-48 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 PNUC_RS03605 d7866dd6cef9013497e147ce2ef09ebb 227 SUPERFAMILY SSF89392 30 226 2.0E-35 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX PNUC_RS03605 d7866dd6cef9013497e147ce2ef09ebb 227 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 38 215 1.6E-30 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PNUC_RS03605 d7866dd6cef9013497e147ce2ef09ebb 227 PANTHER PTHR35869 1 224 1.2E-24 T 22-04-2016 PNUC_RS03605 d7866dd6cef9013497e147ce2ef09ebb 227 Gene3D G3DSA:2.50.20.10 30 225 1.1E-49 T 22-04-2016 PNUC_RS03605 d7866dd6cef9013497e147ce2ef09ebb 227 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 226 24.556 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 PNUC_RS05995 dabbbd35b266ce5685eb34850d66e0ea 268 PANTHER PTHR21198 4 261 9.5E-89 T 22-04-2016 PNUC_RS05995 dabbbd35b266ce5685eb34850d66e0ea 268 Pfam PF01177 Asp/Glu/Hydantoin racemase 4 212 6.9E-39 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS05995 dabbbd35b266ce5685eb34850d66e0ea 268 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 68 76 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS05995 dabbbd35b266ce5685eb34850d66e0ea 268 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 177 187 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS05995 dabbbd35b266ce5685eb34850d66e0ea 268 SUPERFAMILY SSF53681 4 104 1.57E-33 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS05995 dabbbd35b266ce5685eb34850d66e0ea 268 SUPERFAMILY SSF53681 106 256 2.94E-35 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS05995 dabbbd35b266ce5685eb34850d66e0ea 268 Hamap MF_00258 Glutamate racemase [murI]. 2 253 35.426 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS05995 dabbbd35b266ce5685eb34850d66e0ea 268 TIGRFAM TIGR00067 glut_race: glutamate racemase 4 244 6.9E-70 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS05995 dabbbd35b266ce5685eb34850d66e0ea 268 PANTHER PTHR21198:SF2 4 261 9.5E-89 T 22-04-2016 PNUC_RS05995 dabbbd35b266ce5685eb34850d66e0ea 268 Gene3D G3DSA:3.40.50.1860 4 170 6.2E-53 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PNUC_RS01620 80b54af63019a13ce5bbaf1cdac131c9 254 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 237 9.8E-51 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 PNUC_RS01620 80b54af63019a13ce5bbaf1cdac131c9 254 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 64 233 8.6E-57 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 PNUC_RS01620 80b54af63019a13ce5bbaf1cdac131c9 254 PANTHER PTHR34136 1 253 1.3E-79 T 22-04-2016 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 200 502 7.2E-120 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 PRINTS PR00481 Cytosol aminopeptidase signature 299 320 6.0E-53 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 PRINTS PR00481 Cytosol aminopeptidase signature 386 401 6.0E-53 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 PRINTS PR00481 Cytosol aminopeptidase signature 277 294 6.0E-53 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 PRINTS PR00481 Cytosol aminopeptidase signature 336 357 6.0E-53 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 PRINTS PR00481 Cytosol aminopeptidase signature 358 378 6.0E-53 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 Gene3D G3DSA:3.40.630.10 188 507 2.9E-138 T 22-04-2016 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 362 369 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 SUPERFAMILY SSF53187 195 507 2.83E-124 T 22-04-2016 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 Gene3D G3DSA:3.40.220.10 31 175 8.8E-12 T 22-04-2016 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 PANTHER PTHR11963:SF13 31 509 6.0E-186 T 22-04-2016 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 4 509 34.026 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 SUPERFAMILY SSF52949 3 199 2.88E-8 T 22-04-2016 PNUC_RS03255 42da713f3f058fa7e0b0f7c7fee0d13d 509 PANTHER PTHR11963 31 509 6.0E-186 T 22-04-2016 PNUC_RS08130 98934377a3486d215458be6ec4d5acce 258 Gene3D G3DSA:3.90.226.10 1 256 5.0E-101 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS08130 98934377a3486d215458be6ec4d5acce 258 PANTHER PTHR11941 1 255 3.7E-125 T 22-04-2016 PNUC_RS08130 98934377a3486d215458be6ec4d5acce 258 PANTHER PTHR11941:SF54 1 255 3.7E-125 T 22-04-2016 PNUC_RS08130 98934377a3486d215458be6ec4d5acce 258 SUPERFAMILY SSF52096 1 257 1.9E-93 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS08130 98934377a3486d215458be6ec4d5acce 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PNUC_RS08130 98934377a3486d215458be6ec4d5acce 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 258 6.4E-86 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PNUC_RS03000 01ae8011edc4cb9df6fb8b47206ee24b 159 SUPERFAMILY SSF56235 1 133 7.02E-18 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS03000 01ae8011edc4cb9df6fb8b47206ee24b 159 Gene3D G3DSA:3.60.60.10 2 148 9.1E-22 T 22-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 PNUC_RS03000 01ae8011edc4cb9df6fb8b47206ee24b 159 PANTHER PTHR35527:SF1 1 130 5.1E-14 T 22-04-2016 PNUC_RS03000 01ae8011edc4cb9df6fb8b47206ee24b 159 PANTHER PTHR35527 1 130 5.1E-14 T 22-04-2016 PNUC_RS03000 01ae8011edc4cb9df6fb8b47206ee24b 159 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 120 9.1E-7 T 22-04-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal PNUC_RS06900 7d7be84aac9a63bceaa640fbad8aa6a4 334 PANTHER PTHR30349:SF16 35 295 2.8E-89 T 22-04-2016 PNUC_RS06900 7d7be84aac9a63bceaa640fbad8aa6a4 334 SUPERFAMILY SSF53850 122 291 4.89E-9 T 22-04-2016 PNUC_RS06900 7d7be84aac9a63bceaa640fbad8aa6a4 334 PANTHER PTHR30349 35 295 2.8E-89 T 22-04-2016 PNUC_RS06900 7d7be84aac9a63bceaa640fbad8aa6a4 334 PIRSF PIRSF017082 1 332 1.8E-71 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS06900 7d7be84aac9a63bceaa640fbad8aa6a4 334 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 57 329 1.7E-82 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS08180 5265055e6146cf5c49b51e121bcc27c7 262 Pfam PF14023 Protein of unknown function (DUF4239) 54 248 2.0E-10 T 22-04-2016 IPR025333 Protein of unknown function DUF4239 PNUC_RS06165 1daf62ce0c700bb3885ef0998fbecd8b 114 PANTHER PTHR34299 1 114 2.8E-14 T 22-04-2016 PNUC_RS06165 1daf62ce0c700bb3885ef0998fbecd8b 114 Gene3D G3DSA:1.10.3830.10 2 112 1.4E-25 T 22-04-2016 PNUC_RS06165 1daf62ce0c700bb3885ef0998fbecd8b 114 PANTHER PTHR34299:SF1 1 114 2.8E-14 T 22-04-2016 PNUC_RS06165 1daf62ce0c700bb3885ef0998fbecd8b 114 Pfam PF01219 Prokaryotic diacylglycerol kinase 13 107 4.9E-21 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 PNUC_RS10610 7f54570a816ddc1654f9cc8cf425deeb 253 Pfam PF06912 Protein of unknown function (DUF1275) 23 234 4.1E-36 T 22-04-2016 IPR010699 Protein of unknown function DUF1275 PNUC_RS10610 7f54570a816ddc1654f9cc8cf425deeb 253 PANTHER PTHR37314 2 253 3.0E-19 T 22-04-2016 PNUC_RS10800 8f5f91ec05f806f8deee7d7967f6234e 88 Pfam PF00825 Ribonuclease P 12 81 4.1E-13 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PNUC_RS10800 8f5f91ec05f806f8deee7d7967f6234e 88 Gene3D G3DSA:3.30.230.10 11 82 2.0E-12 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PNUC_RS10800 8f5f91ec05f806f8deee7d7967f6234e 88 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 9 82 2.3E-12 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PNUC_RS10800 8f5f91ec05f806f8deee7d7967f6234e 88 SUPERFAMILY SSF54211 6 80 3.79E-12 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS10800 8f5f91ec05f806f8deee7d7967f6234e 88 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 14 66 1.0E-5 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PNUC_RS10800 8f5f91ec05f806f8deee7d7967f6234e 88 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 27 41 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 PNUC_RS02360 db0efe37f68dc2f8167da3e317340146 410 Pfam PF07690 Major Facilitator Superfamily 13 260 2.5E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PNUC_RS02360 db0efe37f68dc2f8167da3e317340146 410 Gene3D G3DSA:1.20.1250.20 237 401 1.8E-10 T 22-04-2016 PNUC_RS02360 db0efe37f68dc2f8167da3e317340146 410 Gene3D G3DSA:1.20.1250.20 8 185 6.4E-30 T 22-04-2016 PNUC_RS02360 db0efe37f68dc2f8167da3e317340146 410 SUPERFAMILY SSF103473 7 403 1.7E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain PNUC_RS02360 db0efe37f68dc2f8167da3e317340146 410 PANTHER PTHR11662 255 402 8.0E-22 T 22-04-2016 PNUC_RS02360 db0efe37f68dc2f8167da3e317340146 410 PANTHER PTHR11662 10 232 8.0E-22 T 22-04-2016 PNUC_RS05745 6d9aed592feba7d9b81605c285689bf9 195 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 8 186 3.2E-71 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 PNUC_RS05745 6d9aed592feba7d9b81605c285689bf9 195 SUPERFAMILY SSF52540 19 187 4.18E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05745 6d9aed592feba7d9b81605c285689bf9 195 PANTHER PTHR11055 9 187 4.3E-89 T 22-04-2016 PNUC_RS05745 6d9aed592feba7d9b81605c285689bf9 195 Pfam PF01583 Adenylylsulphate kinase 21 175 3.2E-66 T 22-04-2016 PNUC_RS05745 6d9aed592feba7d9b81605c285689bf9 195 Gene3D G3DSA:3.40.50.300 5 186 1.5E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05745 6d9aed592feba7d9b81605c285689bf9 195 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 20 192 36.634 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 PNUC_RS01425 d77f13b7d73dd77bc270075655487378 371 PANTHER PTHR11079:SF10 1 232 5.0E-56 T 22-04-2016 PNUC_RS01425 d77f13b7d73dd77bc270075655487378 371 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 94 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PNUC_RS01425 d77f13b7d73dd77bc270075655487378 371 SUPERFAMILY SSF53927 6 150 6.52E-47 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PNUC_RS01425 d77f13b7d73dd77bc270075655487378 371 Gene3D G3DSA:3.40.140.10 6 134 1.3E-32 T 22-04-2016 PNUC_RS01425 d77f13b7d73dd77bc270075655487378 371 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 105 1.5E-19 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 PNUC_RS01425 d77f13b7d73dd77bc270075655487378 371 Pfam PF01872 RibD C-terminal domain 153 334 7.7E-43 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PNUC_RS01425 d77f13b7d73dd77bc270075655487378 371 Gene3D G3DSA:3.40.430.10 135 366 1.1E-68 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain PNUC_RS01425 d77f13b7d73dd77bc270075655487378 371 PANTHER PTHR11079 1 232 5.0E-56 T 22-04-2016 PNUC_RS01425 d77f13b7d73dd77bc270075655487378 371 SUPERFAMILY SSF53597 151 366 4.1E-55 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain PNUC_RS01425 d77f13b7d73dd77bc270075655487378 371 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 366 1.8E-48 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 PNUC_RS01425 d77f13b7d73dd77bc270075655487378 371 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 364 3.8E-100 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 PNUC_RS01425 d77f13b7d73dd77bc270075655487378 371 PIRSF PIRSF006769 1 369 8.9E-114 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 PNUC_RS04150 a9f769e6c3e8bb5c478bc62c3389b576 102 SUPERFAMILY SSF57652 22 102 1.83E-27 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 PNUC_RS04150 a9f769e6c3e8bb5c478bc62c3389b576 102 Gene3D G3DSA:4.10.490.10 28 102 6.0E-32 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 PNUC_RS04150 a9f769e6c3e8bb5c478bc62c3389b576 102 Pfam PF01355 High potential iron-sulfur protein 34 99 1.4E-26 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 PANTHER PTHR11564 1 437 1.4E-237 T 22-04-2016 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 458 32.675 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 Pfam PF00448 SRP54-type protein, GTPase domain 103 299 3.7E-72 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.5E-17 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 SMART SM00962 103 299 6.2E-113 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 Gene3D G3DSA:1.20.120.140 2 88 4.2E-29 T 22-04-2016 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 Gene3D G3DSA:3.40.50.300 97 300 2.8E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 SMART SM00382 102 273 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 SMART SM00963 1 86 4.0E-28 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 Pfam PF02978 Signal peptide binding domain 331 430 5.6E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 SUPERFAMILY SSF52540 96 301 3.1E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 SUPERFAMILY SSF47364 1 89 3.27E-23 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 432 5.0E-170 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 SUPERFAMILY SSF47446 301 433 7.46E-44 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 PANTHER PTHR11564:SF7 1 437 1.4E-237 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 PNUC_RS01075 6cad529c144d984bfcde7d136c1c54da 460 Gene3D G3DSA:1.10.260.30 331 434 1.0E-37 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 PNUC_RS03130 bc72b1bf52b48281cde79230fb7653df 116 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 13 110 1.9E-8 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD PNUC_RS01680 0e611a4d2e7c5087390b4ed2ec691584 1082 PANTHER PTHR41244 494 1082 2.9E-115 T 22-04-2016 PNUC_RS01680 0e611a4d2e7c5087390b4ed2ec691584 1082 Pfam PF14307 Glycosyltransferase WbsX 497 834 2.8E-130 T 22-04-2016 IPR032719 Glycosyltransferase WbsX PNUC_RS01680 0e611a4d2e7c5087390b4ed2ec691584 1082 Pfam PF05045 Rhamnan synthesis protein F 852 1076 1.4E-32 T 22-04-2016 IPR007739 Rhamnan synthesis F PNUC_RS01680 0e611a4d2e7c5087390b4ed2ec691584 1082 Pfam PF08241 Methyltransferase domain 57 109 1.3E-7 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PNUC_RS01680 0e611a4d2e7c5087390b4ed2ec691584 1082 Gene3D G3DSA:3.40.50.150 20 133 8.0E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01680 0e611a4d2e7c5087390b4ed2ec691584 1082 SUPERFAMILY SSF53335 45 134 2.51E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01680 0e611a4d2e7c5087390b4ed2ec691584 1082 PANTHER PTHR41244:SF1 494 1082 2.9E-115 T 22-04-2016 PNUC_RS01680 0e611a4d2e7c5087390b4ed2ec691584 1082 Gene3D G3DSA:3.80.10.10 225 367 2.5E-8 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PNUC_RS10060 c7d71f452332425efb431405c7c160d7 251 Gene3D G3DSA:3.40.50.150 80 193 7.7E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS10060 c7d71f452332425efb431405c7c160d7 251 Pfam PF08241 Methyltransferase domain 80 122 3.9E-10 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PNUC_RS10060 c7d71f452332425efb431405c7c160d7 251 SUPERFAMILY SSF53335 81 171 1.53E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS03405 fe6711b93281db4fcff40a23d65e1e12 510 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 461 7.2E-100 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PNUC_RS03405 fe6711b93281db4fcff40a23d65e1e12 510 PANTHER PTHR33362 5 377 6.1E-229 T 22-04-2016 PNUC_RS03405 fe6711b93281db4fcff40a23d65e1e12 510 PANTHER PTHR33362 395 472 6.1E-229 T 22-04-2016 PNUC_RS03405 fe6711b93281db4fcff40a23d65e1e12 510 PANTHER PTHR33362:SF7 5 377 6.1E-229 T 22-04-2016 PNUC_RS03405 fe6711b93281db4fcff40a23d65e1e12 510 PANTHER PTHR33362:SF7 395 472 6.1E-229 T 22-04-2016 PNUC_RS03405 fe6711b93281db4fcff40a23d65e1e12 510 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 465 1.2E-82 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 PNUC_RS04325 429ca5d9578a470c559fc91f719dc2fc 65 PANTHER PTHR33343 1 65 2.9E-23 T 22-04-2016 PNUC_RS04325 429ca5d9578a470c559fc91f719dc2fc 65 SUPERFAMILY SSF143034 2 64 5.23E-23 T 22-04-2016 PNUC_RS04325 429ca5d9578a470c559fc91f719dc2fc 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.8E-25 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PNUC_RS04325 429ca5d9578a470c559fc91f719dc2fc 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.423 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PNUC_RS04325 429ca5d9578a470c559fc91f719dc2fc 65 Pfam PF01632 Ribosomal protein L35 2 62 3.3E-24 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS04325 429ca5d9578a470c559fc91f719dc2fc 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.3E-17 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PNUC_RS04325 429ca5d9578a470c559fc91f719dc2fc 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 7.3E-17 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PNUC_RS04325 429ca5d9578a470c559fc91f719dc2fc 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 7.3E-17 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PNUC_RS04325 429ca5d9578a470c559fc91f719dc2fc 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS04140 fadf7425d5da0e32b582e6ad7629043a 251 PANTHER PTHR13929:SF0 1 217 2.4E-27 T 22-04-2016 PNUC_RS04140 fadf7425d5da0e32b582e6ad7629043a 251 PANTHER PTHR13929 1 217 2.4E-27 T 22-04-2016 PNUC_RS04140 fadf7425d5da0e32b582e6ad7629043a 251 Pfam PF01040 UbiA prenyltransferase family 2 220 2.6E-24 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PNUC_RS04140 fadf7425d5da0e32b582e6ad7629043a 251 PIRSF PIRSF005355 1 250 1.4E-41 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 PNUC_RS04395 57cd977e837eb4cdeca534000b049d48 282 PANTHER PTHR30007:SF4 1 257 2.3E-64 T 22-04-2016 PNUC_RS04395 57cd977e837eb4cdeca534000b049d48 282 SUPERFAMILY SSF89550 170 281 1.7E-49 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PNUC_RS04395 57cd977e837eb4cdeca534000b049d48 282 SUPERFAMILY SSF89550 7 87 1.7E-49 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PNUC_RS04395 57cd977e837eb4cdeca534000b049d48 282 Gene3D G3DSA:3.20.20.140 162 261 4.1E-42 T 22-04-2016 PNUC_RS04395 57cd977e837eb4cdeca534000b049d48 282 Gene3D G3DSA:3.20.20.140 8 92 4.1E-42 T 22-04-2016 PNUC_RS04395 57cd977e837eb4cdeca534000b049d48 282 PANTHER PTHR30007 1 257 2.3E-64 T 22-04-2016 PNUC_RS04395 57cd977e837eb4cdeca534000b049d48 282 Pfam PF02811 PHP domain 10 144 7.2E-9 T 22-04-2016 IPR004013 PHP domain GO:0003824 PNUC_RS04395 57cd977e837eb4cdeca534000b049d48 282 SMART SM00481 9 74 1.6E-12 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 PNUC_RS01225 6b42c9d52ed3a958ac57786acd51486c 249 Pfam PF04355 SmpA / OmlA family 67 137 6.8E-24 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PNUC_RS01225 6b42c9d52ed3a958ac57786acd51486c 249 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 25 179 38.994 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE PNUC_RS01225 6b42c9d52ed3a958ac57786acd51486c 249 PANTHER PTHR37482:SF1 60 188 2.6E-22 T 22-04-2016 PNUC_RS01225 6b42c9d52ed3a958ac57786acd51486c 249 PANTHER PTHR37482 60 188 2.6E-22 T 22-04-2016 PNUC_RS00035 08e13e728beb62ffb36ef4e851dd9e37 234 SMART SM00382 30 211 1.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS00035 08e13e728beb62ffb36ef4e851dd9e37 234 PANTHER PTHR24220:SF469 7 223 6.0E-84 T 22-04-2016 PNUC_RS00035 08e13e728beb62ffb36ef4e851dd9e37 234 Pfam PF00005 ABC transporter 21 162 7.7E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS00035 08e13e728beb62ffb36ef4e851dd9e37 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS00035 08e13e728beb62ffb36ef4e851dd9e37 234 PANTHER PTHR24220 7 223 6.0E-84 T 22-04-2016 PNUC_RS00035 08e13e728beb62ffb36ef4e851dd9e37 234 Gene3D G3DSA:3.40.50.300 2 224 3.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00035 08e13e728beb62ffb36ef4e851dd9e37 234 SUPERFAMILY SSF52540 4 228 4.39E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07805 87770ebf14f6344ff778e5ea597fdadb 419 PANTHER PTHR11601:SF34 21 419 8.2E-228 T 22-04-2016 PNUC_RS07805 87770ebf14f6344ff778e5ea597fdadb 419 SUPERFAMILY SSF53383 22 406 9.21E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS07805 87770ebf14f6344ff778e5ea597fdadb 419 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 212 231 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PNUC_RS07805 87770ebf14f6344ff778e5ea597fdadb 419 Gene3D G3DSA:3.90.1150.10 269 390 7.5E-52 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS07805 87770ebf14f6344ff778e5ea597fdadb 419 Pfam PF00266 Aminotransferase class-V 22 382 4.3E-85 T 22-04-2016 IPR000192 Aminotransferase class V domain PNUC_RS07805 87770ebf14f6344ff778e5ea597fdadb 419 Gene3D G3DSA:3.40.640.10 34 268 7.7E-95 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS07805 87770ebf14f6344ff778e5ea597fdadb 419 PIRSF PIRSF005572 19 399 1.6E-129 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 PNUC_RS07805 87770ebf14f6344ff778e5ea597fdadb 419 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 20 419 9.5E-223 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 PNUC_RS07805 87770ebf14f6344ff778e5ea597fdadb 419 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 18 410 53.359 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 PNUC_RS07805 87770ebf14f6344ff778e5ea597fdadb 419 PANTHER PTHR11601 21 419 8.2E-228 T 22-04-2016 PNUC_RS07690 90271ca190ebbca101d20a2fe876ddbc 586 PANTHER PTHR30255:SF2 18 578 2.6E-176 T 22-04-2016 PNUC_RS07690 90271ca190ebbca101d20a2fe876ddbc 586 Pfam PF01368 DHH family 75 212 5.4E-12 T 22-04-2016 IPR001667 DDH domain PNUC_RS07690 90271ca190ebbca101d20a2fe876ddbc 586 PANTHER PTHR30255 18 578 2.6E-176 T 22-04-2016 PNUC_RS07690 90271ca190ebbca101d20a2fe876ddbc 586 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 578 1.4E-135 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 PNUC_RS07690 90271ca190ebbca101d20a2fe876ddbc 586 Pfam PF02272 DHHA1 domain 385 455 1.4E-10 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 PNUC_RS07690 90271ca190ebbca101d20a2fe876ddbc 586 SUPERFAMILY SSF64182 48 469 1.57E-108 T 22-04-2016 PNUC_RS10655 5eddc8719537d3c288f2beeac4b6086f 368 SUPERFAMILY SSF52151 79 153 1.33E-21 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PNUC_RS10655 5eddc8719537d3c288f2beeac4b6086f 368 SUPERFAMILY SSF52151 187 284 1.33E-21 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PNUC_RS10655 5eddc8719537d3c288f2beeac4b6086f 368 Pfam PF01734 Patatin-like phospholipase 80 282 8.0E-14 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PNUC_RS10655 5eddc8719537d3c288f2beeac4b6086f 368 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 29 9.1E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PNUC_RS08125 2e7406aff8a6e49f9482310745a8a686 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 294 1.8E-35 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PNUC_RS08125 2e7406aff8a6e49f9482310745a8a686 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 165 2.5E-49 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PNUC_RS08125 2e7406aff8a6e49f9482310745a8a686 298 SUPERFAMILY SSF48179 167 296 4.76E-40 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS08125 2e7406aff8a6e49f9482310745a8a686 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 295 3.5E-126 T 22-04-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|UniPathway: UPA00362 PNUC_RS08125 2e7406aff8a6e49f9482310745a8a686 298 Gene3D G3DSA:3.40.50.720 1 165 1.8E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08125 2e7406aff8a6e49f9482310745a8a686 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 PNUC_RS08125 2e7406aff8a6e49f9482310745a8a686 298 PIRSF PIRSF000103 1 298 1.3E-76 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PNUC_RS08125 2e7406aff8a6e49f9482310745a8a686 298 SUPERFAMILY SSF51735 1 166 4.84E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08125 2e7406aff8a6e49f9482310745a8a686 298 Gene3D G3DSA:1.10.1040.10 167 297 1.7E-47 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PNUC_RS08125 2e7406aff8a6e49f9482310745a8a686 298 PANTHER PTHR22981 1 295 1.7E-125 T 22-04-2016 PNUC_RS06520 d5266cff9550dbd6c6a06f906ea9bd66 458 Gene3D G3DSA:3.30.1330.120 272 403 2.8E-21 T 22-04-2016 PNUC_RS06520 d5266cff9550dbd6c6a06f906ea9bd66 458 Pfam PF03972 MmgE/PrpD family 8 445 8.7E-136 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 PNUC_RS06520 d5266cff9550dbd6c6a06f906ea9bd66 458 PANTHER PTHR16943 4 446 1.1E-145 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 PNUC_RS06520 d5266cff9550dbd6c6a06f906ea9bd66 458 PANTHER PTHR16943:SF8 4 446 1.1E-145 T 22-04-2016 PNUC_RS06520 d5266cff9550dbd6c6a06f906ea9bd66 458 SUPERFAMILY SSF103378 5 447 1.24E-115 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 PNUC_RS02920 9b6013df2aba1ecc87f31726c5a999c2 247 Pfam PF01169 Uncharacterized protein family UPF0016 9 83 4.8E-5 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 PNUC_RS06195 9a010a5e98a0d27a12e67ee4542b3b5c 272 PANTHER PTHR30269:SF18 1 271 1.1E-58 T 22-04-2016 PNUC_RS06195 9a010a5e98a0d27a12e67ee4542b3b5c 272 Pfam PF01925 Sulfite exporter TauE/SafE 10 262 2.3E-47 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS06195 9a010a5e98a0d27a12e67ee4542b3b5c 272 PANTHER PTHR30269 1 271 1.1E-58 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS09100 9e3ca021a7cbc01d1f5e85a99a5e5658 150 PANTHER PTHR37953 1 148 4.1E-24 T 22-04-2016 PNUC_RS09100 9e3ca021a7cbc01d1f5e85a99a5e5658 150 Pfam PF02643 Uncharacterized ACR, COG1430 43 144 1.2E-30 T 22-04-2016 IPR003795 Protein of unknown function DUF192 PNUC_RS09100 9e3ca021a7cbc01d1f5e85a99a5e5658 150 PANTHER PTHR37953:SF1 1 148 4.1E-24 T 22-04-2016 PNUC_RS09485 7294fec4f258ece25f2b1df1b74501a1 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 4.6E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site PNUC_RS09485 7294fec4f258ece25f2b1df1b74501a1 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site PNUC_RS09485 7294fec4f258ece25f2b1df1b74501a1 170 Pfam PF13633 Prokaryotic N-terminal methylation site 14 38 1.3E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site PNUC_RS09485 7294fec4f258ece25f2b1df1b74501a1 170 Gene3D G3DSA:3.30.700.10 17 167 1.9E-30 T 22-04-2016 PNUC_RS09485 7294fec4f258ece25f2b1df1b74501a1 170 Pfam PF00114 Pilin (bacterial filament) 45 167 1.3E-15 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 PNUC_RS09485 7294fec4f258ece25f2b1df1b74501a1 170 PANTHER PTHR30093 13 90 2.2E-18 T 22-04-2016 PNUC_RS09485 7294fec4f258ece25f2b1df1b74501a1 170 SUPERFAMILY SSF54523 17 110 3.56E-21 T 22-04-2016 PNUC_RS01560 841890361ee07929512e95a35086dfbb 102 Pfam PF01355 High potential iron-sulfur protein 34 99 1.4E-26 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 PNUC_RS01560 841890361ee07929512e95a35086dfbb 102 SUPERFAMILY SSF57652 22 102 1.83E-27 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 PNUC_RS01560 841890361ee07929512e95a35086dfbb 102 Gene3D G3DSA:4.10.490.10 28 102 6.0E-32 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 PNUC_RS01945 cc8fe8e8df9e61a7281b21d212d8ed38 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 3.4E-17 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PNUC_RS01945 cc8fe8e8df9e61a7281b21d212d8ed38 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 3.7E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PNUC_RS01945 cc8fe8e8df9e61a7281b21d212d8ed38 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 3.7E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PNUC_RS01945 cc8fe8e8df9e61a7281b21d212d8ed38 227 PANTHER PTHR30055 12 221 2.2E-20 T 22-04-2016 PNUC_RS01945 cc8fe8e8df9e61a7281b21d212d8ed38 227 Gene3D G3DSA:1.10.357.10 17 216 1.4E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PNUC_RS01945 cc8fe8e8df9e61a7281b21d212d8ed38 227 SUPERFAMILY SSF46689 17 91 6.16E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS07760 f4082e9bd45294c61432dc1b267d5e1e 403 PANTHER PTHR40269:SF1 14 403 3.8E-79 T 22-04-2016 PNUC_RS07760 f4082e9bd45294c61432dc1b267d5e1e 403 PANTHER PTHR40269 14 403 3.8E-79 T 22-04-2016 PNUC_RS07760 f4082e9bd45294c61432dc1b267d5e1e 403 Pfam PF11737 Protein of unknown function (DUF3300) 45 280 3.1E-87 T 22-04-2016 IPR021728 Protein of unknown function DUF3300 PNUC_RS05530 79ded73f613bb417ceeb54be22889f7d 286 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 97 119 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PNUC_RS05530 79ded73f613bb417ceeb54be22889f7d 286 Pfam PF01066 CDP-alcohol phosphatidyltransferase 56 119 1.3E-13 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PNUC_RS05530 79ded73f613bb417ceeb54be22889f7d 286 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 63 225 7.7E-36 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 PNUC_RS05530 79ded73f613bb417ceeb54be22889f7d 286 PANTHER PTHR15362 51 181 2.6E-35 T 22-04-2016 PNUC_RS07950 bb5b606efaa5a58e45baec643403c453 184 Pfam PF03358 NADPH-dependent FMN reductase 47 114 1.9E-9 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PNUC_RS07950 bb5b606efaa5a58e45baec643403c453 184 SUPERFAMILY SSF52218 1 183 2.62E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain PNUC_RS07950 bb5b606efaa5a58e45baec643403c453 184 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 PNUC_RS07950 bb5b606efaa5a58e45baec643403c453 184 Gene3D G3DSA:3.40.50.360 1 183 5.3E-61 T 22-04-2016 IPR029039 Flavoprotein-like domain PNUC_RS07950 bb5b606efaa5a58e45baec643403c453 184 PANTHER PTHR30546:SF0 1 183 9.1E-33 T 22-04-2016 PNUC_RS07950 bb5b606efaa5a58e45baec643403c453 184 PANTHER PTHR30546 1 183 9.1E-33 T 22-04-2016 PNUC_RS01505 2ab6a520da848a5a0b2f432334070b5f 212 PANTHER PTHR30625 1 206 2.7E-35 T 22-04-2016 PNUC_RS01505 2ab6a520da848a5a0b2f432334070b5f 212 Pfam PF01618 MotA/TolQ/ExbB proton channel family 93 195 1.5E-24 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PNUC_RS06250 11ffd519867cf9c8ad9323cd3c05d8f8 86 Gene3D G3DSA:3.40.50.300 2 78 6.8E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06250 11ffd519867cf9c8ad9323cd3c05d8f8 86 PANTHER PTHR24220 1 85 1.3E-24 T 22-04-2016 PNUC_RS06250 11ffd519867cf9c8ad9323cd3c05d8f8 86 SUPERFAMILY SSF52540 2 84 1.08E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS06250 11ffd519867cf9c8ad9323cd3c05d8f8 86 PANTHER PTHR24220:SF568 1 85 1.3E-24 T 22-04-2016 PNUC_RS06370 4132abbc0da02fad8ca027365e87da68 299 PANTHER PTHR11079 6 292 1.3E-83 T 22-04-2016 PNUC_RS06370 4132abbc0da02fad8ca027365e87da68 299 Pfam PF00849 RNA pseudouridylate synthase 93 242 4.0E-20 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS06370 4132abbc0da02fad8ca027365e87da68 299 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 132 146 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS06370 4132abbc0da02fad8ca027365e87da68 299 SUPERFAMILY SSF55120 78 293 2.56E-45 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PNUC_RS06370 4132abbc0da02fad8ca027365e87da68 299 PANTHER PTHR11079:SF61 6 292 1.3E-83 T 22-04-2016 PNUC_RS05465 e48bdee16a45762dd2cc13993ea30e69 168 Gene3D G3DSA:3.40.30.10 81 166 2.2E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS05465 e48bdee16a45762dd2cc13993ea30e69 168 PIRSF PIRSF000216 2 168 1.6E-54 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 PNUC_RS05465 e48bdee16a45762dd2cc13993ea30e69 168 PANTHER PTHR10371 8 164 5.9E-53 T 22-04-2016 PNUC_RS05465 e48bdee16a45762dd2cc13993ea30e69 168 SUPERFAMILY SSF52833 8 164 2.76E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS05465 e48bdee16a45762dd2cc13993ea30e69 168 PANTHER PTHR10371:SF3 8 164 5.9E-53 T 22-04-2016 PNUC_RS05465 e48bdee16a45762dd2cc13993ea30e69 168 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 16 161 4.4E-48 T 22-04-2016 PNUC_RS05465 e48bdee16a45762dd2cc13993ea30e69 168 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 15 161 2.0E-56 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 PNUC_RS01650 85bb7f703a124083b5ea0cf512cf3572 227 Gene3D G3DSA:3.40.50.20 15 91 1.2E-18 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PNUC_RS01650 85bb7f703a124083b5ea0cf512cf3572 227 Gene3D G3DSA:2.160.10.10 99 221 8.7E-31 T 22-04-2016 PNUC_RS01650 85bb7f703a124083b5ea0cf512cf3572 227 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 16 214 7.9E-57 T 22-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like PNUC_RS01650 85bb7f703a124083b5ea0cf512cf3572 227 SUPERFAMILY SSF51161 14 216 4.3E-37 T 22-04-2016 IPR011004 Trimeric LpxA-like PNUC_RS01650 85bb7f703a124083b5ea0cf512cf3572 227 PANTHER PTHR23416:SF23 83 220 2.6E-25 T 22-04-2016 PNUC_RS01650 85bb7f703a124083b5ea0cf512cf3572 227 PANTHER PTHR23416:SF23 55 65 2.6E-25 T 22-04-2016 PNUC_RS01650 85bb7f703a124083b5ea0cf512cf3572 227 PANTHER PTHR23416 83 220 2.6E-25 T 22-04-2016 PNUC_RS01650 85bb7f703a124083b5ea0cf512cf3572 227 PANTHER PTHR23416 55 65 2.6E-25 T 22-04-2016 PNUC_RS01650 85bb7f703a124083b5ea0cf512cf3572 227 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 175 199 1.2E-4 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS01650 85bb7f703a124083b5ea0cf512cf3572 227 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 112 142 5.0E-6 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS00825 e193a66a1b8fc350bac874e0696d1736 375 SUPERFAMILY SSF50685 18 375 1.19E-116 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PNUC_RS00825 e193a66a1b8fc350bac874e0696d1736 375 Pfam PF06725 3D domain 299 372 4.8E-22 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 PNUC_RS00825 e193a66a1b8fc350bac874e0696d1736 375 PIRSF PIRSF019422 1 375 1.3E-110 T 22-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A PNUC_RS00825 e193a66a1b8fc350bac874e0696d1736 375 SMART SM00925 140 275 2.2E-66 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 PNUC_RS00825 e193a66a1b8fc350bac874e0696d1736 375 Pfam PF03562 MltA specific insert domain 63 275 2.6E-67 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 PNUC_RS00825 e193a66a1b8fc350bac874e0696d1736 375 PANTHER PTHR30124:SF0 58 375 2.6E-93 T 22-04-2016 PNUC_RS00825 e193a66a1b8fc350bac874e0696d1736 375 Gene3D G3DSA:2.40.40.10 186 375 7.5E-54 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PNUC_RS00825 e193a66a1b8fc350bac874e0696d1736 375 Gene3D G3DSA:2.40.40.10 50 178 2.4E-31 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PNUC_RS00825 e193a66a1b8fc350bac874e0696d1736 375 PANTHER PTHR30124 58 375 2.6E-93 T 22-04-2016 PNUC_RS06410 a31051e5b659aa7f1a6671c85a2f4691 307 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 81 8.3E-19 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal PNUC_RS06410 a31051e5b659aa7f1a6671c85a2f4691 307 PANTHER PTHR33490 1 307 1.2E-62 T 22-04-2016 PNUC_RS06410 a31051e5b659aa7f1a6671c85a2f4691 307 PANTHER PTHR33490:SF6 1 307 1.2E-62 T 22-04-2016 PNUC_RS06410 a31051e5b659aa7f1a6671c85a2f4691 307 Gene3D G3DSA:3.90.260.10 174 258 1.7E-9 T 22-04-2016 IPR002931 Transglutaminase-like PNUC_RS06410 a31051e5b659aa7f1a6671c85a2f4691 307 Pfam PF01841 Transglutaminase-like superfamily 142 255 5.1E-19 T 22-04-2016 IPR002931 Transglutaminase-like PNUC_RS06410 a31051e5b659aa7f1a6671c85a2f4691 307 SMART SM00460 178 257 6.8E-12 T 22-04-2016 IPR002931 Transglutaminase-like PNUC_RS06410 a31051e5b659aa7f1a6671c85a2f4691 307 SUPERFAMILY SSF54001 7 288 8.59E-36 T 22-04-2016 PNUC_RS05415 56a6c7f72c13834a73a973e0f5a9b74a 199 Pfam PF00293 NUDIX domain 55 167 5.1E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PNUC_RS05415 56a6c7f72c13834a73a973e0f5a9b74a 199 PANTHER PTHR11839 20 199 2.4E-48 T 22-04-2016 PNUC_RS05415 56a6c7f72c13834a73a973e0f5a9b74a 199 ProSitePatterns PS00893 Nudix box signature. 89 110 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PNUC_RS05415 56a6c7f72c13834a73a973e0f5a9b74a 199 PANTHER PTHR11839:SF9 20 199 2.4E-48 T 22-04-2016 PNUC_RS05415 56a6c7f72c13834a73a973e0f5a9b74a 199 Gene3D G3DSA:3.90.79.10 18 188 1.9E-52 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS05415 56a6c7f72c13834a73a973e0f5a9b74a 199 SUPERFAMILY SSF55811 20 187 1.9E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS00610 230a9e0e6c526fddc1bb4b9375433deb 253 PANTHER PTHR21235:SF15 1 252 2.7E-96 T 22-04-2016 PNUC_RS00610 230a9e0e6c526fddc1bb4b9375433deb 253 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 35.418 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 PNUC_RS00610 230a9e0e6c526fddc1bb4b9375433deb 253 PANTHER PTHR21235 1 252 2.7E-96 T 22-04-2016 PNUC_RS00610 230a9e0e6c526fddc1bb4b9375433deb 253 SUPERFAMILY SSF51366 1 240 1.26E-72 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PNUC_RS00610 230a9e0e6c526fddc1bb4b9375433deb 253 Pfam PF00977 Histidine biosynthesis protein 3 232 1.6E-76 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 PNUC_RS00610 230a9e0e6c526fddc1bb4b9375433deb 253 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 236 1.4E-76 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 PNUC_RS00610 230a9e0e6c526fddc1bb4b9375433deb 253 Gene3D G3DSA:3.20.20.70 1 241 1.3E-85 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS05955 e4e67df0dfd8a4e5fec3de3375465aba 780 Pfam PF00271 Helicase conserved C-terminal domain 408 524 1.1E-6 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS05955 e4e67df0dfd8a4e5fec3de3375465aba 780 SMART SM00487 163 358 2.7E-18 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PNUC_RS05955 e4e67df0dfd8a4e5fec3de3375465aba 780 Pfam PF08463 EcoEI R protein C-terminal 625 779 1.9E-28 T 22-04-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 PNUC_RS05955 e4e67df0dfd8a4e5fec3de3375465aba 780 Gene3D G3DSA:3.40.50.300 166 330 4.2E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05955 e4e67df0dfd8a4e5fec3de3375465aba 780 Gene3D G3DSA:3.40.50.300 406 526 1.9E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05955 e4e67df0dfd8a4e5fec3de3375465aba 780 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 31 113 1.6E-11 T 22-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain PNUC_RS05955 e4e67df0dfd8a4e5fec3de3375465aba 780 Pfam PF04851 Type III restriction enzyme, res subunit 167 323 3.1E-42 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PNUC_RS05955 e4e67df0dfd8a4e5fec3de3375465aba 780 SUPERFAMILY SSF52540 118 360 1.23E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05955 e4e67df0dfd8a4e5fec3de3375465aba 780 SUPERFAMILY SSF52540 393 535 1.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05955 e4e67df0dfd8a4e5fec3de3375465aba 780 SUPERFAMILY SSF52540 269 320 1.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05955 e4e67df0dfd8a4e5fec3de3375465aba 780 PANTHER PTHR30195 3 544 1.3E-68 T 22-04-2016 PNUC_RS05955 e4e67df0dfd8a4e5fec3de3375465aba 780 PANTHER PTHR30195:SF3 3 544 1.3E-68 T 22-04-2016 PNUC_RS04225 4ac5f4aacba59120274a654a7542dab3 145 PANTHER PTHR30574:SF1 5 142 1.4E-24 T 22-04-2016 PNUC_RS04225 4ac5f4aacba59120274a654a7542dab3 145 PANTHER PTHR30574 5 142 1.4E-24 T 22-04-2016 PNUC_RS04225 4ac5f4aacba59120274a654a7542dab3 145 Pfam PF04143 Sulphur transport 10 133 1.3E-7 T 22-04-2016 IPR007272 Sulphur transport domain PNUC_RS10590 329147dcf5b31952158bc32a2c64bb0b 119 Pfam PF04342 Putative member of DMT superfamily (DUF486) 14 117 1.5E-44 T 22-04-2016 IPR007437 Putative member of DMT superfamily PNUC_RS10590 329147dcf5b31952158bc32a2c64bb0b 119 PANTHER PTHR38482 5 118 6.7E-52 T 22-04-2016 PNUC_RS10590 329147dcf5b31952158bc32a2c64bb0b 119 PIRSF PIRSF021239 9 119 5.3E-52 T 22-04-2016 IPR007437 Putative member of DMT superfamily PNUC_RS01735 304c25a20bd5a3e1e9a924efc328e877 389 Pfam PF09594 Protein of unknown function (DUF2029) 75 284 3.6E-9 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 PNUC_RS08055 e66b813a1472b74200379793ab940605 519 SUPERFAMILY SSF50022 51 172 5.37E-30 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PNUC_RS08055 e66b813a1472b74200379793ab940605 519 PANTHER PTHR21266 43 328 2.5E-45 T 22-04-2016 PNUC_RS08055 e66b813a1472b74200379793ab940605 519 Pfam PF00355 Rieske [2Fe-2S] domain 60 139 9.6E-14 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PNUC_RS08055 e66b813a1472b74200379793ab940605 519 PANTHER PTHR21266:SF23 43 328 2.5E-45 T 22-04-2016 PNUC_RS08055 e66b813a1472b74200379793ab940605 519 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 100 122 - T 22-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 PNUC_RS08055 e66b813a1472b74200379793ab940605 519 SUPERFAMILY SSF55961 163 346 4.21E-24 T 22-04-2016 PNUC_RS08055 e66b813a1472b74200379793ab940605 519 SUPERFAMILY SSF55961 383 432 4.21E-24 T 22-04-2016 PNUC_RS08055 e66b813a1472b74200379793ab940605 519 Gene3D G3DSA:2.102.10.10 59 180 8.0E-26 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PNUC_RS03355 f384bd6eb51f0fa538fcbc92fe78a6a1 380 Gene3D G3DSA:3.60.60.10 29 359 2.2E-81 T 22-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 PNUC_RS03355 f384bd6eb51f0fa538fcbc92fe78a6a1 380 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 29 303 6.5E-46 T 22-04-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal PNUC_RS03355 f384bd6eb51f0fa538fcbc92fe78a6a1 380 SUPERFAMILY SSF56235 29 353 4.32E-69 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS03355 f384bd6eb51f0fa538fcbc92fe78a6a1 380 PANTHER PTHR35527:SF1 1 352 1.5E-78 T 22-04-2016 PNUC_RS03355 f384bd6eb51f0fa538fcbc92fe78a6a1 380 PANTHER PTHR35527 1 352 1.5E-78 T 22-04-2016 PNUC_RS05280 6c4e55c59cdd5394ae7fb4246acb6913 695 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 149 1.5E-12 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PNUC_RS05280 6c4e55c59cdd5394ae7fb4246acb6913 695 Gene3D G3DSA:2.40.170.20 158 695 1.4E-50 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PNUC_RS05280 6c4e55c59cdd5394ae7fb4246acb6913 695 SUPERFAMILY SSF56935 50 407 6.72E-66 T 22-04-2016 PNUC_RS05280 6c4e55c59cdd5394ae7fb4246acb6913 695 SUPERFAMILY SSF56935 437 695 6.72E-66 T 22-04-2016 PNUC_RS05280 6c4e55c59cdd5394ae7fb4246acb6913 695 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 678 695 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site PNUC_RS05280 6c4e55c59cdd5394ae7fb4246acb6913 695 PANTHER PTHR30069:SF13 50 426 1.1E-37 T 22-04-2016 PNUC_RS05280 6c4e55c59cdd5394ae7fb4246acb6913 695 PANTHER PTHR30069:SF13 442 567 1.1E-37 T 22-04-2016 PNUC_RS05280 6c4e55c59cdd5394ae7fb4246acb6913 695 Gene3D G3DSA:2.170.130.10 28 156 9.8E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PNUC_RS05280 6c4e55c59cdd5394ae7fb4246acb6913 695 PANTHER PTHR30069 50 426 1.1E-37 T 22-04-2016 PNUC_RS05280 6c4e55c59cdd5394ae7fb4246acb6913 695 PANTHER PTHR30069 442 567 1.1E-37 T 22-04-2016 PNUC_RS04970 a11d6c23106c19e1fa99a5a657cebb3d 237 PANTHER PTHR11863 25 213 9.0E-19 T 22-04-2016 PNUC_RS04970 a11d6c23106c19e1fa99a5a657cebb3d 237 Pfam PF04116 Fatty acid hydroxylase superfamily 78 207 8.0E-24 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PNUC_RS04970 a11d6c23106c19e1fa99a5a657cebb3d 237 PANTHER PTHR11863:SF2 25 213 9.0E-19 T 22-04-2016 PNUC_RS07145 21485eb1b9bc0eca866515378848186a 325 Pfam PF00892 EamA-like transporter family 165 300 8.5E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PNUC_RS07145 21485eb1b9bc0eca866515378848186a 325 Pfam PF00892 EamA-like transporter family 15 152 2.3E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PNUC_RS07145 21485eb1b9bc0eca866515378848186a 325 PANTHER PTHR12715 1 301 1.4E-65 T 22-04-2016 PNUC_RS07145 21485eb1b9bc0eca866515378848186a 325 SUPERFAMILY SSF103481 225 305 3.79E-12 T 22-04-2016 PNUC_RS07145 21485eb1b9bc0eca866515378848186a 325 SUPERFAMILY SSF103481 50 155 4.45E-13 T 22-04-2016 PNUC_RS07145 21485eb1b9bc0eca866515378848186a 325 PANTHER PTHR12715:SF5 1 301 1.4E-65 T 22-04-2016 PNUC_RS04720 6dd4706894d981ff5d3f49387f573466 289 PANTHER PTHR22908 12 242 6.5E-71 T 22-04-2016 PNUC_RS04720 6dd4706894d981ff5d3f49387f573466 289 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 38 182 1.4E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS04720 6dd4706894d981ff5d3f49387f573466 289 SUPERFAMILY SSF52540 17 277 9.12E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04720 6dd4706894d981ff5d3f49387f573466 289 SMART SM00382 34 192 1.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS04720 6dd4706894d981ff5d3f49387f573466 289 Gene3D G3DSA:3.40.50.300 17 211 2.2E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03155 7f7b40ea9d554038a1083c357dec3c4d 473 Gene3D G3DSA:3.40.50.300 21 242 4.5E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03155 7f7b40ea9d554038a1083c357dec3c4d 473 Pfam PF00270 DEAD/DEAH box helicase 52 226 5.7E-53 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PNUC_RS03155 7f7b40ea9d554038a1083c357dec3c4d 473 SMART SM00490 292 373 5.1E-30 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS03155 7f7b40ea9d554038a1083c357dec3c4d 473 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 183 191 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PNUC_RS03155 7f7b40ea9d554038a1083c357dec3c4d 473 Gene3D G3DSA:3.40.50.300 243 408 1.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03155 7f7b40ea9d554038a1083c357dec3c4d 473 Pfam PF00271 Helicase conserved C-terminal domain 273 373 8.3E-25 T 22-04-2016 IPR001650 Helicase, C-terminal PNUC_RS03155 7f7b40ea9d554038a1083c357dec3c4d 473 SUPERFAMILY SSF52540 105 391 2.64E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03155 7f7b40ea9d554038a1083c357dec3c4d 473 PANTHER PTHR24031 18 402 2.5E-173 T 22-04-2016 PNUC_RS03155 7f7b40ea9d554038a1083c357dec3c4d 473 SMART SM00487 47 252 4.3E-62 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PNUC_RS05155 30224d0233fbf5f257a4457b3d97ff87 244 Gene3D G3DSA:3.40.50.300 1 230 1.3E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05155 30224d0233fbf5f257a4457b3d97ff87 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS05155 30224d0233fbf5f257a4457b3d97ff87 244 PANTHER PTHR24220 3 242 4.2E-172 T 22-04-2016 PNUC_RS05155 30224d0233fbf5f257a4457b3d97ff87 244 SMART SM00382 26 213 1.8E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS05155 30224d0233fbf5f257a4457b3d97ff87 244 Pfam PF00005 ABC transporter 18 165 4.6E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS05155 30224d0233fbf5f257a4457b3d97ff87 244 PIRSF PIRSF039085 1 243 2.1E-100 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PNUC_RS05155 30224d0233fbf5f257a4457b3d97ff87 244 SUPERFAMILY SSF52540 1 230 6.86E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05155 30224d0233fbf5f257a4457b3d97ff87 244 PANTHER PTHR24220:SF317 3 242 4.2E-172 T 22-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 PNUC_RS01820 a43c94775578f66121011ab7200985ef 114 PANTHER PTHR39426 1 106 1.4E-12 T 22-04-2016 PNUC_RS01820 a43c94775578f66121011ab7200985ef 114 SUPERFAMILY SSF140931 19 108 1.44E-11 T 22-04-2016 IPR003812 Fido domain PNUC_RS01820 a43c94775578f66121011ab7200985ef 114 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 2 106 4.7E-13 T 22-04-2016 IPR006440 Death on curing protein GO:0016301 PNUC_RS01820 a43c94775578f66121011ab7200985ef 114 Pfam PF02661 Fic/DOC family 2 69 2.0E-9 T 22-04-2016 IPR003812 Fido domain PNUC_RS01820 a43c94775578f66121011ab7200985ef 114 PANTHER PTHR39426:SF1 1 106 1.4E-12 T 22-04-2016 PNUC_RS01820 a43c94775578f66121011ab7200985ef 114 Gene3D G3DSA:1.10.3290.10 35 98 3.4E-7 T 22-04-2016 IPR003812 Fido domain PNUC_RS05720 d6bbfab4706bfc179ebd3e9745f259bf 590 Gene3D G3DSA:2.40.160.50 187 565 9.9E-44 T 22-04-2016 PNUC_RS05720 d6bbfab4706bfc179ebd3e9745f259bf 590 Pfam PF08479 POTRA domain, ShlB-type 74 147 2.9E-14 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type PNUC_RS05720 d6bbfab4706bfc179ebd3e9745f259bf 590 PANTHER PTHR34597 25 589 2.7E-57 T 22-04-2016 PNUC_RS05720 d6bbfab4706bfc179ebd3e9745f259bf 590 Gene3D G3DSA:3.10.20.310 70 147 2.4E-11 T 22-04-2016 PNUC_RS05720 d6bbfab4706bfc179ebd3e9745f259bf 590 PANTHER PTHR34597:SF1 25 589 2.7E-57 T 22-04-2016 PNUC_RS04220 97d9df881082d2c066de88f843b95be3 373 PANTHER PTHR30574:SF1 1 370 3.7E-45 T 22-04-2016 PNUC_RS04220 97d9df881082d2c066de88f843b95be3 373 PANTHER PTHR30574 1 370 3.7E-45 T 22-04-2016 PNUC_RS04220 97d9df881082d2c066de88f843b95be3 373 Pfam PF04143 Sulphur transport 30 358 4.1E-61 T 22-04-2016 IPR007272 Sulphur transport domain PNUC_RS03005 210fce20625d301775ec61db6737898a 364 PANTHER PTHR35527 299 333 5.6E-70 T 22-04-2016 PNUC_RS03005 210fce20625d301775ec61db6737898a 364 PANTHER PTHR35527 1 282 5.6E-70 T 22-04-2016 PNUC_RS03005 210fce20625d301775ec61db6737898a 364 PANTHER PTHR35527:SF1 299 333 5.6E-70 T 22-04-2016 PNUC_RS03005 210fce20625d301775ec61db6737898a 364 PANTHER PTHR35527:SF1 1 282 5.6E-70 T 22-04-2016 PNUC_RS03005 210fce20625d301775ec61db6737898a 364 SUPERFAMILY SSF56235 2 337 3.7E-65 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS03005 210fce20625d301775ec61db6737898a 364 Gene3D G3DSA:3.60.60.10 2 353 1.6E-77 T 22-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 PNUC_RS03005 210fce20625d301775ec61db6737898a 364 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 276 3.7E-44 T 22-04-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal PNUC_RS06780 5df45caa759e4ec5afd5a73039a475d5 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 33.802 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS06780 5df45caa759e4ec5afd5a73039a475d5 141 SMART SM00562 3 140 3.4E-78 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS06780 5df45caa759e4ec5afd5a73039a475d5 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS06780 5df45caa759e4ec5afd5a73039a475d5 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.7E-36 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS06780 5df45caa759e4ec5afd5a73039a475d5 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.7E-36 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS06780 5df45caa759e4ec5afd5a73039a475d5 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.7E-36 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS06780 5df45caa759e4ec5afd5a73039a475d5 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.7E-36 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS06780 5df45caa759e4ec5afd5a73039a475d5 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.7E-36 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS06780 5df45caa759e4ec5afd5a73039a475d5 141 Gene3D G3DSA:3.30.70.141 1 138 9.9E-57 T 22-04-2016 PNUC_RS06780 5df45caa759e4ec5afd5a73039a475d5 141 PANTHER PTHR11349 1 134 8.4E-63 T 22-04-2016 PNUC_RS06780 5df45caa759e4ec5afd5a73039a475d5 141 Pfam PF00334 Nucleoside diphosphate kinase 4 135 1.0E-52 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS06780 5df45caa759e4ec5afd5a73039a475d5 141 SUPERFAMILY SSF54919 1 140 1.14E-55 T 22-04-2016 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 312 384 1.1E-19 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 Pfam PF02867 Ribonucleotide reductase, barrel domain 389 928 1.8E-186 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 772 794 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 Pfam PF03477 ATP cone domain 51 147 9.4E-19 T 22-04-2016 IPR005144 ATP-cone domain PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 SUPERFAMILY SSF48168 176 387 1.96E-58 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 PANTHER PTHR11573 173 993 0.0 T 22-04-2016 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 PRINTS PR01183 Ribonucleotide reductase large chain signature 599 610 1.2E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 PRINTS PR01183 Ribonucleotide reductase large chain signature 464 483 1.2E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 PRINTS PR01183 Ribonucleotide reductase large chain signature 783 810 1.2E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 PRINTS PR01183 Ribonucleotide reductase large chain signature 641 664 1.2E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 PRINTS PR01183 Ribonucleotide reductase large chain signature 707 730 1.2E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 PRINTS PR01183 Ribonucleotide reductase large chain signature 679 701 1.2E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 315 931 2.4E-213 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 Gene3D G3DSA:3.20.70.20 565 727 5.1E-85 T 22-04-2016 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 Gene3D G3DSA:3.20.70.20 305 510 5.1E-85 T 22-04-2016 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 Gene3D G3DSA:3.20.70.20 889 930 5.1E-85 T 22-04-2016 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 Gene3D G3DSA:3.20.70.20 783 828 5.1E-85 T 22-04-2016 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 SUPERFAMILY SSF51998 388 832 1.16E-181 T 22-04-2016 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 SUPERFAMILY SSF51998 863 931 1.16E-181 T 22-04-2016 PNUC_RS01090 3ba0157b7d59591e188cec3848273630 993 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 320 925 3.6E-120 T 22-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PNUC_RS06650 67649ac38bff435ce50836b2900d8ba5 466 PANTHER PTHR30354:SF7 1 466 1.2E-220 T 22-04-2016 PNUC_RS06650 67649ac38bff435ce50836b2900d8ba5 466 PANTHER PTHR30354 1 466 1.2E-220 T 22-04-2016 PNUC_RS06485 eca8679b76fda3471f5914b740aaaaa4 341 Gene3D G3DSA:1.10.3720.10 124 329 1.2E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS06485 eca8679b76fda3471f5914b740aaaaa4 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 4 43 1.4E-6 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PNUC_RS06485 eca8679b76fda3471f5914b740aaaaa4 341 PANTHER PTHR30325 3 337 1.4E-157 T 22-04-2016 PNUC_RS06485 eca8679b76fda3471f5914b740aaaaa4 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 151 331 1.7E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS06485 eca8679b76fda3471f5914b740aaaaa4 341 SUPERFAMILY SSF161098 128 315 1.28E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS03385 13ce3db7924792c898c360a59d1a29fa 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 18 187 5.5E-47 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 PNUC_RS03385 13ce3db7924792c898c360a59d1a29fa 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 188 27.305 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 PNUC_RS03385 13ce3db7924792c898c360a59d1a29fa 188 Pfam PF00692 dUTPase 82 184 3.3E-6 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 PNUC_RS03385 13ce3db7924792c898c360a59d1a29fa 188 PANTHER PTHR11241:SF1 1 187 1.6E-70 T 22-04-2016 PNUC_RS03385 13ce3db7924792c898c360a59d1a29fa 188 SUPERFAMILY SSF51283 3 187 2.36E-51 T 22-04-2016 IPR029054 dUTPase-like PNUC_RS03385 13ce3db7924792c898c360a59d1a29fa 188 PANTHER PTHR11241 1 187 1.6E-70 T 22-04-2016 PNUC_RS03385 13ce3db7924792c898c360a59d1a29fa 188 Gene3D G3DSA:2.70.40.10 3 187 2.0E-65 T 22-04-2016 IPR029054 dUTPase-like PNUC_RS06455 35f9422beb0ec07f800e204d3354c58f 163 Gene3D G3DSA:3.30.300.70 4 73 1.3E-9 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal PNUC_RS06455 35f9422beb0ec07f800e204d3354c58f 163 Gene3D G3DSA:2.30.30.180 80 153 3.2E-6 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal PNUC_RS06455 35f9422beb0ec07f800e204d3354c58f 163 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 156 17.718 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 PNUC_RS06455 35f9422beb0ec07f800e204d3354c58f 163 Pfam PF02576 Putative ribosome maturation factor RimP 7 151 5.5E-24 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 PNUC_RS06455 35f9422beb0ec07f800e204d3354c58f 163 SUPERFAMILY SSF74942 77 155 2.75E-8 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal PNUC_RS06455 35f9422beb0ec07f800e204d3354c58f 163 SUPERFAMILY SSF75420 6 76 8.37E-10 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal PNUC_RS06455 35f9422beb0ec07f800e204d3354c58f 163 PANTHER PTHR33867 5 112 6.2E-22 T 22-04-2016 PNUC_RS06455 35f9422beb0ec07f800e204d3354c58f 163 PANTHER PTHR33867:SF1 5 112 6.2E-22 T 22-04-2016 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 486 5.7E-219 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 1.9E-20 T 22-04-2016 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 1.9E-20 T 22-04-2016 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 PRINTS PR00419 Adrenodoxin reductase family signature 296 310 1.9E-20 T 22-04-2016 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 Gene3D G3DSA:3.50.50.60 402 480 1.9E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 Gene3D G3DSA:3.50.50.60 145 255 1.0E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 Gene3D G3DSA:1.10.1060.10 3 144 2.0E-40 T 22-04-2016 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 1.1E-24 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 SUPERFAMILY SSF51971 142 410 8.12E-65 T 22-04-2016 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 PANTHER PTHR11938:SF75 7 329 1.1E-137 T 22-04-2016 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 PANTHER PTHR11938:SF75 345 480 1.1E-137 T 22-04-2016 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 468 4.7E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 SUPERFAMILY SSF51905 380 477 1.14E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 Gene3D G3DSA:3.50.50.60 256 401 9.1E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 PANTHER PTHR11938 7 329 1.1E-137 T 22-04-2016 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 PANTHER PTHR11938 345 480 1.1E-137 T 22-04-2016 PNUC_RS00530 b434959a86802b95455cc29b05959d2d 487 SUPERFAMILY SSF46548 2 154 2.88E-38 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PNUC_RS04165 bd415c3279b92542c20e1e3bacfec7e9 286 PANTHER PTHR11935 8 281 2.5E-101 T 22-04-2016 PNUC_RS04165 bd415c3279b92542c20e1e3bacfec7e9 286 PANTHER PTHR11935:SF110 8 281 2.5E-101 T 22-04-2016 PNUC_RS04165 bd415c3279b92542c20e1e3bacfec7e9 286 SUPERFAMILY SSF56281 9 285 1.52E-48 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS04165 bd415c3279b92542c20e1e3bacfec7e9 286 SMART SM00849 15 204 1.2E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS04165 bd415c3279b92542c20e1e3bacfec7e9 286 Gene3D G3DSA:3.60.15.10 5 247 4.6E-48 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS04165 bd415c3279b92542c20e1e3bacfec7e9 286 Pfam PF00753 Metallo-beta-lactamase superfamily 19 204 5.5E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS01725 656972dcbeded357246da65731d44417 294 PANTHER PTHR11048 14 234 1.7E-46 T 22-04-2016 PNUC_RS01725 656972dcbeded357246da65731d44417 294 Pfam PF01040 UbiA prenyltransferase family 48 260 1.0E-22 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PNUC_RS01725 656972dcbeded357246da65731d44417 294 PANTHER PTHR11048:SF5 14 234 1.7E-46 T 22-04-2016 PNUC_RS08280 b515e6069118e548f0e01fd7b1343841 245 PANTHER PTHR37323:SF1 13 245 5.9E-74 T 22-04-2016 PNUC_RS08280 b515e6069118e548f0e01fd7b1343841 245 Pfam PF13444 Acetyltransferase (GNAT) domain 28 128 6.1E-37 T 22-04-2016 PNUC_RS08280 b515e6069118e548f0e01fd7b1343841 245 SUPERFAMILY SSF55729 11 218 1.7E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS08280 b515e6069118e548f0e01fd7b1343841 245 PANTHER PTHR37323 13 245 5.9E-74 T 22-04-2016 PNUC_RS08280 b515e6069118e548f0e01fd7b1343841 245 Gene3D G3DSA:3.40.630.30 16 215 2.1E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS02415 1af75d2a796d98fe1508c6c681ccd771 239 PANTHER PTHR42208 1 225 2.9E-24 T 22-04-2016 PNUC_RS02415 1af75d2a796d98fe1508c6c681ccd771 239 PANTHER PTHR42208:SF1 1 225 2.9E-24 T 22-04-2016 PNUC_RS02415 1af75d2a796d98fe1508c6c681ccd771 239 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 217 3.3E-48 T 22-04-2016 PNUC_RS04050 d10a5ad565f5aa6286ac06402908e384 188 Pfam PF02674 Colicin V production protein 12 153 7.2E-34 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PNUC_RS04050 d10a5ad565f5aa6286ac06402908e384 188 PANTHER PTHR36926 8 165 2.7E-31 T 22-04-2016 PNUC_RS04050 d10a5ad565f5aa6286ac06402908e384 188 PANTHER PTHR36926:SF1 8 165 2.7E-31 T 22-04-2016 PNUC_RS09635 b1bc820101f8f4c0a5a35eed260d6cf6 136 Gene3D G3DSA:3.40.250.10 3 128 7.6E-31 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS09635 b1bc820101f8f4c0a5a35eed260d6cf6 136 PANTHER PTHR12231 5 128 1.2E-13 T 22-04-2016 PNUC_RS09635 b1bc820101f8f4c0a5a35eed260d6cf6 136 Pfam PF00581 Rhodanese-like domain 25 122 4.5E-17 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS09635 b1bc820101f8f4c0a5a35eed260d6cf6 136 SMART SM00450 21 125 7.0E-18 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS09635 b1bc820101f8f4c0a5a35eed260d6cf6 136 SUPERFAMILY SSF52821 6 130 3.54E-28 T 22-04-2016 IPR001763 Rhodanese-like domain PNUC_RS10010 0103d19dc83b99e4a2b672b81727847c 297 PANTHER PTHR11048 6 297 1.4E-71 T 22-04-2016 PNUC_RS10010 0103d19dc83b99e4a2b672b81727847c 297 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 17 294 4.7E-91 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 PNUC_RS10010 0103d19dc83b99e4a2b672b81727847c 297 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 14 295 19.175 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 PNUC_RS10010 0103d19dc83b99e4a2b672b81727847c 297 Pfam PF01040 UbiA prenyltransferase family 30 278 2.7E-57 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PNUC_RS07725 df7c89e039f1754316028ecc9af1ad96 181 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 160 1.4E-34 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS07725 df7c89e039f1754316028ecc9af1ad96 181 Gene3D G3DSA:3.90.45.10 1 163 4.6E-52 T 22-04-2016 IPR023635 Peptide deformylase PNUC_RS07725 df7c89e039f1754316028ecc9af1ad96 181 PIRSF PIRSF004749 1 172 4.4E-47 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS07725 df7c89e039f1754316028ecc9af1ad96 181 SUPERFAMILY SSF56420 2 168 1.96E-55 T 22-04-2016 IPR023635 Peptide deformylase PNUC_RS07725 df7c89e039f1754316028ecc9af1ad96 181 PRINTS PR01576 Peptide deformylase signature 131 160 2.6E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS07725 df7c89e039f1754316028ecc9af1ad96 181 PRINTS PR01576 Peptide deformylase signature 100 111 2.6E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS07725 df7c89e039f1754316028ecc9af1ad96 181 PRINTS PR01576 Peptide deformylase signature 36 65 2.6E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS07725 df7c89e039f1754316028ecc9af1ad96 181 PRINTS PR01576 Peptide deformylase signature 112 130 2.6E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS07725 df7c89e039f1754316028ecc9af1ad96 181 Pfam PF01327 Polypeptide deformylase 4 160 4.7E-46 T 22-04-2016 IPR023635 Peptide deformylase PNUC_RS07725 df7c89e039f1754316028ecc9af1ad96 181 Hamap MF_00163 Peptide deformylase [def]. 2 177 26.114 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS07725 df7c89e039f1754316028ecc9af1ad96 181 PANTHER PTHR10458 1 168 1.0E-63 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PNUC_RS07725 df7c89e039f1754316028ecc9af1ad96 181 PANTHER PTHR10458:SF4 1 168 1.0E-63 T 22-04-2016 PNUC_RS06470 07160242cd303c18ab1f598d39a2d9cd 301 PANTHER PTHR14226 44 300 2.4E-75 T 22-04-2016 PNUC_RS06470 07160242cd303c18ab1f598d39a2d9cd 301 Pfam PF01734 Patatin-like phospholipase 49 210 8.4E-28 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PNUC_RS06470 07160242cd303c18ab1f598d39a2d9cd 301 PANTHER PTHR14226:SF24 44 300 2.4E-75 T 22-04-2016 PNUC_RS06470 07160242cd303c18ab1f598d39a2d9cd 301 Gene3D G3DSA:3.40.1090.10 45 212 2.8E-16 T 22-04-2016 PNUC_RS06470 07160242cd303c18ab1f598d39a2d9cd 301 SUPERFAMILY SSF52151 44 259 3.66E-55 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PNUC_RS02810 3063e07954409b4d848ed80eb6812188 292 PANTHER PTHR32308 2 286 1.8E-92 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like PNUC_RS02810 3063e07954409b4d848ed80eb6812188 292 SUPERFAMILY SSF51621 5 232 1.26E-69 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS02810 3063e07954409b4d848ed80eb6812188 292 PANTHER PTHR32308:SF0 2 286 1.8E-92 T 22-04-2016 PNUC_RS02810 3063e07954409b4d848ed80eb6812188 292 PIRSF PIRSF015582 2 291 2.9E-85 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like PNUC_RS02810 3063e07954409b4d848ed80eb6812188 292 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 9 222 1.5E-48 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PNUC_RS02810 3063e07954409b4d848ed80eb6812188 292 Gene3D G3DSA:3.20.20.60 5 232 2.4E-78 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS03335 da0bb09c576979ff5407f2dbc78c87a5 142 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 130 9.4E-24 T 22-04-2016 IPR000014 PAS domain PNUC_RS03335 da0bb09c576979ff5407f2dbc78c87a5 142 PANTHER PTHR24423 7 138 6.8E-14 T 22-04-2016 PNUC_RS03335 da0bb09c576979ff5407f2dbc78c87a5 142 SMART SM00091 5 71 8.1E-13 T 22-04-2016 IPR000014 PAS domain PNUC_RS03335 da0bb09c576979ff5407f2dbc78c87a5 142 SUPERFAMILY SSF55785 16 132 1.08E-27 T 22-04-2016 IPR000014 PAS domain PNUC_RS03335 da0bb09c576979ff5407f2dbc78c87a5 142 Gene3D G3DSA:3.30.450.20 7 119 3.5E-25 T 22-04-2016 PNUC_RS03335 da0bb09c576979ff5407f2dbc78c87a5 142 PANTHER PTHR24423:SF438 7 138 6.8E-14 T 22-04-2016 PNUC_RS03335 da0bb09c576979ff5407f2dbc78c87a5 142 Pfam PF00989 PAS fold 6 119 3.6E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 PANTHER PTHR21342 1 158 6.6E-70 T 22-04-2016 PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 Pfam PF01467 Cytidylyltransferase-like 5 133 1.1E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 1.0E-54 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 2.5E-44 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 2.5E-44 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 2.5E-44 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 2.5E-44 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 2.5E-44 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 Gene3D G3DSA:3.40.50.620 1 157 1.9E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 PANTHER PTHR21342:SF1 1 158 6.6E-70 T 22-04-2016 PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 34.665 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 57 1.0E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PNUC_RS09975 992ac9786791814a7cf9b48145c5dc16 165 SUPERFAMILY SSF52374 3 157 4.56E-43 T 22-04-2016 PNUC_RS06330 5c16cc22034df665c43646f39611ed04 402 Pfam PF07394 Protein of unknown function (DUF1501) 276 382 1.7E-24 T 22-04-2016 IPR010869 Protein of unknown function DUF1501 PNUC_RS05015 0fa640c25ad9585436e3d12510b7de7d 188 PANTHER PTHR33877 78 182 2.4E-29 T 22-04-2016 PNUC_RS05015 0fa640c25ad9585436e3d12510b7de7d 188 Pfam PF14279 HNH endonuclease 91 145 1.3E-21 T 22-04-2016 IPR029471 HNH endonuclease 5 PNUC_RS05015 0fa640c25ad9585436e3d12510b7de7d 188 SMART SM00507 78 131 4.7E-13 T 22-04-2016 IPR003615 HNH nuclease PNUC_RS03665 56781f8695b0bc818bbc963ddc76fffd 107 PIRSF PIRSF004555 2 107 1.8E-31 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PNUC_RS03665 56781f8695b0bc818bbc963ddc76fffd 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 96 20.731 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PNUC_RS03665 56781f8695b0bc818bbc963ddc76fffd 107 Gene3D G3DSA:3.30.1310.10 1 107 2.9E-40 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PNUC_RS03665 56781f8695b0bc818bbc963ddc76fffd 107 SUPERFAMILY SSF82607 10 101 2.75E-30 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PNUC_RS03665 56781f8695b0bc818bbc963ddc76fffd 107 Pfam PF02575 YbaB/EbfC DNA-binding family 10 97 4.8E-30 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PNUC_RS03665 56781f8695b0bc818bbc963ddc76fffd 107 PANTHER PTHR33449:SF1 1 107 5.9E-38 T 22-04-2016 PNUC_RS03665 56781f8695b0bc818bbc963ddc76fffd 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 3.4E-30 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PNUC_RS03665 56781f8695b0bc818bbc963ddc76fffd 107 PANTHER PTHR33449 1 107 5.9E-38 T 22-04-2016 PNUC_RS03305 daf08299624e8a926162aa76dba6d95e 119 Pfam PF05164 Cell division protein ZapA 8 100 1.4E-12 T 22-04-2016 IPR007838 Cell division protein ZapA-like PNUC_RS03305 daf08299624e8a926162aa76dba6d95e 119 SUPERFAMILY SSF102829 7 75 3.14E-9 T 22-04-2016 IPR007838 Cell division protein ZapA-like PNUC_RS10830 70822911b228c39860004ac51fc5b2f8 436 Gene3D G3DSA:1.10.3210.10 241 425 7.7E-19 T 22-04-2016 IPR006674 HD domain PNUC_RS10830 70822911b228c39860004ac51fc5b2f8 436 SMART SM00471 241 392 2.2E-10 T 22-04-2016 IPR003607 HD/PDEase domain PNUC_RS10830 70822911b228c39860004ac51fc5b2f8 436 SUPERFAMILY SSF109604 229 420 1.38E-32 T 22-04-2016 PNUC_RS10830 70822911b228c39860004ac51fc5b2f8 436 Pfam PF01966 HD domain 246 382 3.8E-17 T 22-04-2016 IPR006674 HD domain PNUC_RS01800 6ba368c03d8fb7164659904e7025eaa4 168 PIRSF PIRSF030820 8 167 1.1E-37 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 PNUC_RS01800 6ba368c03d8fb7164659904e7025eaa4 168 Pfam PF06073 Bacterial protein of unknown function (DUF934) 53 158 5.5E-32 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 PNUC_RS10300 4ba5b3dcdff8db12fc3ca9079553b409 513 PANTHER PTHR30203 23 502 5.4E-95 T 22-04-2016 PNUC_RS10300 4ba5b3dcdff8db12fc3ca9079553b409 513 SUPERFAMILY SSF56954 76 490 1.06E-102 T 22-04-2016 PNUC_RS10300 4ba5b3dcdff8db12fc3ca9079553b409 513 SUPERFAMILY SSF56954 11 37 1.06E-102 T 22-04-2016 PNUC_RS10300 4ba5b3dcdff8db12fc3ca9079553b409 513 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 487 2.3E-129 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PNUC_RS10300 4ba5b3dcdff8db12fc3ca9079553b409 513 PANTHER PTHR30203:SF9 23 502 5.4E-95 T 22-04-2016 PNUC_RS10300 4ba5b3dcdff8db12fc3ca9079553b409 513 Gene3D G3DSA:1.20.1600.10 74 490 8.4E-98 T 22-04-2016 PNUC_RS10300 4ba5b3dcdff8db12fc3ca9079553b409 513 Pfam PF02321 Outer membrane efflux protein 85 276 8.2E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PNUC_RS10300 4ba5b3dcdff8db12fc3ca9079553b409 513 Pfam PF02321 Outer membrane efflux protein 306 485 1.4E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 PANTHER PTHR24322 11 142 5.7E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 PANTHER PTHR24322 158 189 5.7E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 Gene3D G3DSA:3.40.50.720 5 231 4.2E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 Pfam PF00106 short chain dehydrogenase 7 199 6.1E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 SUPERFAMILY SSF51735 3 232 1.8E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 6.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS08110 cd07d6fa99471ba9c735f45694d98acd 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 6.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PNUC_RS07365 0d4719a8292c00952a60f257f6630345 64 Gene3D G3DSA:3.30.70.100 2 62 3.7E-17 T 22-04-2016 PNUC_RS07365 0d4719a8292c00952a60f257f6630345 64 Pfam PF00403 Heavy-metal-associated domain 4 53 1.1E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PNUC_RS07365 0d4719a8292c00952a60f257f6630345 64 SUPERFAMILY SSF55008 3 62 1.01E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PNUC_RS07365 0d4719a8292c00952a60f257f6630345 64 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PNUC_RS03935 5c8942d0118b5291200e6c55cde303a5 403 Pfam PF11062 Protein of unknown function (DUF2863) 5 402 1.6E-164 T 22-04-2016 IPR021292 Protein of unknown function DUF2863 PNUC_RS02075 9ffd2f0a2821b29a0a368c8f9f108fcf 59 SUPERFAMILY SSF57829 2 55 4.7E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 PNUC_RS02075 9ffd2f0a2821b29a0a368c8f9f108fcf 59 PANTHER PTHR35534 1 59 4.0E-24 T 22-04-2016 PNUC_RS02075 9ffd2f0a2821b29a0a368c8f9f108fcf 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.113 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 PNUC_RS02075 9ffd2f0a2821b29a0a368c8f9f108fcf 59 Pfam PF01783 Ribosomal L32p protein family 2 55 1.6E-18 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 PNUC_RS02075 9ffd2f0a2821b29a0a368c8f9f108fcf 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 3.9E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 PNUC_RS08685 23a1642cdc1dbe8c1dbdd2dd0657f090 596 Pfam PF03814 Potassium-transporting ATPase A subunit 11 590 2.1E-240 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PNUC_RS08685 23a1642cdc1dbe8c1dbdd2dd0657f090 596 PIRSF PIRSF001294 1 593 1.2E-237 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PNUC_RS08685 23a1642cdc1dbe8c1dbdd2dd0657f090 596 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 592 35.61 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PNUC_RS08685 23a1642cdc1dbe8c1dbdd2dd0657f090 596 PANTHER PTHR30607 245 596 1.7E-296 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PNUC_RS08685 23a1642cdc1dbe8c1dbdd2dd0657f090 596 PANTHER PTHR30607 2 215 1.7E-296 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PNUC_RS08685 23a1642cdc1dbe8c1dbdd2dd0657f090 596 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 243 591 1.1E-160 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PNUC_RS08520 c4fbec32e720dc71c8ca8f96d6632e14 326 Gene3D G3DSA:3.40.50.720 2 191 8.0E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08520 c4fbec32e720dc71c8ca8f96d6632e14 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 206 5.5E-21 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PNUC_RS08520 c4fbec32e720dc71c8ca8f96d6632e14 326 PANTHER PTHR10366:SF228 2 320 7.5E-85 T 22-04-2016 PNUC_RS08520 c4fbec32e720dc71c8ca8f96d6632e14 326 Gene3D G3DSA:3.90.25.10 192 303 1.4E-39 T 22-04-2016 PNUC_RS08520 c4fbec32e720dc71c8ca8f96d6632e14 326 PANTHER PTHR10366 2 320 7.5E-85 T 22-04-2016 PNUC_RS08520 c4fbec32e720dc71c8ca8f96d6632e14 326 SUPERFAMILY SSF51735 1 322 1.6E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS09760 7a519631515ce45bcd228b0c158fbcec 375 Pfam PF03702 Uncharacterised protein family (UPF0075) 7 375 4.2E-134 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 PNUC_RS09760 7a519631515ce45bcd228b0c158fbcec 375 SUPERFAMILY SSF53067 147 348 4.66E-24 T 22-04-2016 PNUC_RS09760 7a519631515ce45bcd228b0c158fbcec 375 SUPERFAMILY SSF53067 69 114 4.66E-24 T 22-04-2016 PNUC_RS09760 7a519631515ce45bcd228b0c158fbcec 375 SUPERFAMILY SSF53067 7 40 4.66E-24 T 22-04-2016 PNUC_RS09760 7a519631515ce45bcd228b0c158fbcec 375 Gene3D G3DSA:3.30.420.40 7 199 2.3E-65 T 22-04-2016 PNUC_RS09760 7a519631515ce45bcd228b0c158fbcec 375 PANTHER PTHR30605:SF0 1 374 4.6E-131 T 22-04-2016 PNUC_RS09760 7a519631515ce45bcd228b0c158fbcec 375 PANTHER PTHR30605 1 374 4.6E-131 T 22-04-2016 PNUC_RS09760 7a519631515ce45bcd228b0c158fbcec 375 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 6 375 39.45 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 PNUC_RS10345 86265672bd4af5c8ba2a8feffcb8afa8 651 Gene3D G3DSA:1.10.1240.20 405 461 1.0E-7 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 PNUC_RS10345 86265672bd4af5c8ba2a8feffcb8afa8 651 Pfam PF01464 Transglycosylase SLT domain 495 589 2.1E-21 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 PNUC_RS10345 86265672bd4af5c8ba2a8feffcb8afa8 651 SUPERFAMILY SSF48435 50 475 5.23E-93 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 PNUC_RS10345 86265672bd4af5c8ba2a8feffcb8afa8 651 Gene3D G3DSA:1.25.20.10 245 386 7.4E-32 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 PNUC_RS10345 86265672bd4af5c8ba2a8feffcb8afa8 651 Gene3D G3DSA:1.25.20.10 51 235 9.9E-37 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 PNUC_RS10345 86265672bd4af5c8ba2a8feffcb8afa8 651 SUPERFAMILY SSF53955 477 638 5.91E-42 T 22-04-2016 IPR023346 Lysozyme-like domain PNUC_RS10345 86265672bd4af5c8ba2a8feffcb8afa8 651 PANTHER PTHR21666 463 628 6.3E-33 T 22-04-2016 PNUC_RS10345 86265672bd4af5c8ba2a8feffcb8afa8 651 Gene3D G3DSA:1.10.530.10 472 635 1.5E-42 T 22-04-2016 PNUC_RS10345 86265672bd4af5c8ba2a8feffcb8afa8 651 Pfam PF14718 Soluble lytic murein transglycosylase L domain 407 465 6.5E-7 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 PNUC_RS00150 c7b0f137844fa9e92de05f85a155f924 130 PANTHER PTHR11715 8 124 5.5E-49 T 22-04-2016 IPR002930 Glycine cleavage system H-protein PNUC_RS00150 c7b0f137844fa9e92de05f85a155f924 130 Pfam PF01597 Glycine cleavage H-protein 8 124 4.3E-37 T 22-04-2016 IPR002930 Glycine cleavage system H-protein PNUC_RS00150 c7b0f137844fa9e92de05f85a155f924 130 SUPERFAMILY SSF51230 5 126 2.09E-34 T 22-04-2016 IPR011053 Single hybrid motif PNUC_RS00150 c7b0f137844fa9e92de05f85a155f924 130 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PNUC_RS00150 c7b0f137844fa9e92de05f85a155f924 130 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 5 125 6.5E-38 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 PNUC_RS00150 c7b0f137844fa9e92de05f85a155f924 130 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 129 26.93 T 22-04-2016 IPR002930 Glycine cleavage system H-protein PNUC_RS00150 c7b0f137844fa9e92de05f85a155f924 130 Gene3D G3DSA:2.40.50.100 7 126 2.8E-40 T 22-04-2016 PNUC_RS08665 f01b34f1e7ea50c5e12a28bd9b644f90 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 228 1.7E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PNUC_RS08665 f01b34f1e7ea50c5e12a28bd9b644f90 230 SUPERFAMILY SSF52172 9 174 3.92E-36 T 22-04-2016 IPR011006 CheY-like superfamily PNUC_RS08665 f01b34f1e7ea50c5e12a28bd9b644f90 230 Pfam PF00072 Response regulator receiver domain 9 117 4.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS08665 f01b34f1e7ea50c5e12a28bd9b644f90 230 SMART SM00448 6 116 8.5E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PNUC_RS08665 f01b34f1e7ea50c5e12a28bd9b644f90 230 PANTHER PTHR26402:SF399 6 228 1.2E-87 T 22-04-2016 PNUC_RS08665 f01b34f1e7ea50c5e12a28bd9b644f90 230 SMART SM00862 152 228 7.7E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PNUC_RS08665 f01b34f1e7ea50c5e12a28bd9b644f90 230 Gene3D G3DSA:1.10.10.10 129 228 3.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS08665 f01b34f1e7ea50c5e12a28bd9b644f90 230 PANTHER PTHR26402 6 228 1.2E-87 T 22-04-2016 PNUC_RS08665 f01b34f1e7ea50c5e12a28bd9b644f90 230 Gene3D G3DSA:3.40.50.2300 9 128 1.8E-34 T 22-04-2016 PNUC_RS04635 c553205642f1ac3fe382884e746c823e 113 SUPERFAMILY SSF46785 36 110 9.79E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS04635 c553205642f1ac3fe382884e746c823e 113 Gene3D G3DSA:1.10.10.10 59 110 7.2E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS00110 ec5a6bba88b610461fda418c164621ea 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.1E-40 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 PNUC_RS00110 ec5a6bba88b610461fda418c164621ea 156 SUPERFAMILY SSF81573 62 121 5.89E-9 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain PNUC_RS00110 ec5a6bba88b610461fda418c164621ea 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 2.8E-28 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PNUC_RS00110 ec5a6bba88b610461fda418c164621ea 156 Gene3D G3DSA:1.20.5.620 62 122 1.6E-9 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain PNUC_RS00110 ec5a6bba88b610461fda418c164621ea 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.16 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PNUC_RS00110 ec5a6bba88b610461fda418c164621ea 156 PANTHER PTHR33445 1 156 6.8E-34 T 22-04-2016 PNUC_RS07900 8283feef8a3af99dafc7e40f73f4dd64 176 Gene3D G3DSA:3.40.30.10 4 174 3.9E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS07900 8283feef8a3af99dafc7e40f73f4dd64 176 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 171 6.4E-53 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 PNUC_RS07900 8283feef8a3af99dafc7e40f73f4dd64 176 SUPERFAMILY SSF52833 30 172 3.94E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS07900 8283feef8a3af99dafc7e40f73f4dd64 176 PANTHER PTHR10681:SF107 6 174 4.7E-53 T 22-04-2016 PNUC_RS07900 8283feef8a3af99dafc7e40f73f4dd64 176 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PNUC_RS07900 8283feef8a3af99dafc7e40f73f4dd64 176 Pfam PF00578 AhpC/TSA family 35 151 3.7E-14 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PNUC_RS07900 8283feef8a3af99dafc7e40f73f4dd64 176 PANTHER PTHR10681 6 174 4.7E-53 T 22-04-2016 PNUC_RS00765 3d27c0fcef89aac0355ca5fe3dce9f47 237 Pfam PF10411 Disulfide bond isomerase protein N-terminus 34 82 2.5E-19 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PNUC_RS00765 3d27c0fcef89aac0355ca5fe3dce9f47 237 Pfam PF13098 Thioredoxin-like domain 112 231 3.5E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS00765 3d27c0fcef89aac0355ca5fe3dce9f47 237 Gene3D G3DSA:3.10.450.70 25 87 8.4E-20 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal PNUC_RS00765 3d27c0fcef89aac0355ca5fe3dce9f47 237 Gene3D G3DSA:3.40.30.10 109 233 3.1E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS00765 3d27c0fcef89aac0355ca5fe3dce9f47 237 PANTHER PTHR35272 1 223 7.3E-31 T 22-04-2016 PNUC_RS00765 3d27c0fcef89aac0355ca5fe3dce9f47 237 SUPERFAMILY SSF52833 93 234 1.17E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS00765 3d27c0fcef89aac0355ca5fe3dce9f47 237 SUPERFAMILY SSF54423 31 84 1.96E-12 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PNUC_RS01700 6349dd66c5db42f8adfe0d4a18a1a3b0 324 SUPERFAMILY SSF51735 16 313 7.75E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01700 6349dd66c5db42f8adfe0d4a18a1a3b0 324 PANTHER PTHR10366 17 255 8.9E-34 T 22-04-2016 PNUC_RS01700 6349dd66c5db42f8adfe0d4a18a1a3b0 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 225 2.7E-16 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PNUC_RS01700 6349dd66c5db42f8adfe0d4a18a1a3b0 324 Gene3D G3DSA:3.40.50.720 16 311 3.1E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS08700 842a6570286fa922e9d510f6b40b0fb1 108 Pfam PF00403 Heavy-metal-associated domain 27 86 1.0E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PNUC_RS08700 842a6570286fa922e9d510f6b40b0fb1 108 SUPERFAMILY SSF55008 26 90 2.49E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PNUC_RS08700 842a6570286fa922e9d510f6b40b0fb1 108 Gene3D G3DSA:3.30.70.100 23 87 6.6E-15 T 22-04-2016 PNUC_RS02520 e22089ea2d8d257a239cf241ca3cac25 457 PANTHER PTHR16943:SF8 10 446 4.9E-121 T 22-04-2016 PNUC_RS02520 e22089ea2d8d257a239cf241ca3cac25 457 PANTHER PTHR16943 10 446 4.9E-121 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 PNUC_RS02520 e22089ea2d8d257a239cf241ca3cac25 457 SUPERFAMILY SSF103378 14 448 4.45E-115 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 PNUC_RS02520 e22089ea2d8d257a239cf241ca3cac25 457 Pfam PF03972 MmgE/PrpD family 17 440 1.2E-121 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 PNUC_RS02520 e22089ea2d8d257a239cf241ca3cac25 457 Gene3D G3DSA:3.30.1330.120 276 409 3.2E-26 T 22-04-2016 PNUC_RS01220 d29c821140746e8d979d2688ac5914e7 151 SUPERFAMILY SSF46785 10 142 3.7E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS01220 d29c821140746e8d979d2688ac5914e7 151 Pfam PF01475 Ferric uptake regulator family 16 138 1.4E-40 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PNUC_RS01220 d29c821140746e8d979d2688ac5914e7 151 PANTHER PTHR33202 10 143 4.2E-34 T 22-04-2016 PNUC_RS01220 d29c821140746e8d979d2688ac5914e7 151 Gene3D G3DSA:1.10.10.10 10 91 9.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS02800 bb038ea7a902a411c79910303c61939d 609 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 462 604 1.0E-43 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding PNUC_RS02800 bb038ea7a902a411c79910303c61939d 609 Pfam PF00027 Cyclic nucleotide-binding domain 31 110 1.2E-8 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain PNUC_RS02800 bb038ea7a902a411c79910303c61939d 609 Gene3D G3DSA:2.60.120.10 12 131 4.6E-14 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS02800 bb038ea7a902a411c79910303c61939d 609 SUPERFAMILY SSF51206 10 132 9.69E-16 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like PNUC_RS02800 bb038ea7a902a411c79910303c61939d 609 Gene3D G3DSA:3.10.580.10 145 267 1.3E-20 T 22-04-2016 PNUC_RS02800 bb038ea7a902a411c79910303c61939d 609 Pfam PF03445 Putative nucleotidyltransferase DUF294 292 424 3.1E-39 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 PNUC_RS02800 bb038ea7a902a411c79910303c61939d 609 SMART SM00116 220 267 1.3E-7 T 22-04-2016 IPR000644 CBS domain PNUC_RS02800 bb038ea7a902a411c79910303c61939d 609 SMART SM00116 153 203 1.0 T 22-04-2016 IPR000644 CBS domain PNUC_RS02800 bb038ea7a902a411c79910303c61939d 609 SUPERFAMILY SSF54631 142 268 1.26E-22 T 22-04-2016 PNUC_RS02800 bb038ea7a902a411c79910303c61939d 609 Pfam PF00571 CBS domain 148 203 9.3E-4 T 22-04-2016 IPR000644 CBS domain PNUC_RS02800 bb038ea7a902a411c79910303c61939d 609 Pfam PF00571 CBS domain 219 267 5.1E-5 T 22-04-2016 IPR000644 CBS domain PNUC_RS09240 f645aedd9c859eb4a34fc02572648652 374 PANTHER PTHR21225 1 371 3.2E-217 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PNUC_RS09240 f645aedd9c859eb4a34fc02572648652 374 PIRSF PIRSF001361 10 373 4.1E-158 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PNUC_RS09240 f645aedd9c859eb4a34fc02572648652 374 Gene3D G3DSA:3.20.20.70 25 372 1.9E-153 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS09240 f645aedd9c859eb4a34fc02572648652 374 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 22 370 5.8E-160 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PNUC_RS09240 f645aedd9c859eb4a34fc02572648652 374 SUPERFAMILY SSF51569 24 369 1.78E-130 T 22-04-2016 PNUC_RS09240 f645aedd9c859eb4a34fc02572648652 374 Pfam PF00793 DAHP synthetase I family 61 359 8.2E-102 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PNUC_RS00520 8625ce311f5b2a04949fb32f3a5e1773 234 Pfam PF01797 Transposase IS200 like 12 121 1.4E-19 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PNUC_RS00520 8625ce311f5b2a04949fb32f3a5e1773 234 SMART SM01321 9 123 6.1E-48 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PNUC_RS00520 8625ce311f5b2a04949fb32f3a5e1773 234 PANTHER PTHR34322:SF1 2 150 1.9E-41 T 22-04-2016 PNUC_RS00520 8625ce311f5b2a04949fb32f3a5e1773 234 SUPERFAMILY SSF143422 3 126 1.7E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PNUC_RS00520 8625ce311f5b2a04949fb32f3a5e1773 234 PANTHER PTHR34322 2 150 1.9E-41 T 22-04-2016 PNUC_RS00520 8625ce311f5b2a04949fb32f3a5e1773 234 Gene3D G3DSA:3.30.70.1290 3 126 3.2E-19 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PNUC_RS08820 35174370b2e54f04c0737c1f9ed1ba5c 641 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 28 402 6.5E-19 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS08820 35174370b2e54f04c0737c1f9ed1ba5c 641 SUPERFAMILY SSF52540 1 178 6.57E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08820 35174370b2e54f04c0737c1f9ed1ba5c 641 SUPERFAMILY SSF52540 281 427 6.57E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08820 35174370b2e54f04c0737c1f9ed1ba5c 641 Gene3D G3DSA:3.40.50.300 1 152 8.3E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS08820 35174370b2e54f04c0737c1f9ed1ba5c 641 Gene3D G3DSA:3.40.50.300 273 427 8.3E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01595 4eae72f1c730b76ea3f81a5382b2aedc 309 Pfam PF01370 NAD dependent epimerase/dehydratase family 1 221 6.3E-69 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PNUC_RS01595 4eae72f1c730b76ea3f81a5382b2aedc 309 Gene3D G3DSA:3.90.25.10 160 200 2.3E-36 T 22-04-2016 PNUC_RS01595 4eae72f1c730b76ea3f81a5382b2aedc 309 Gene3D G3DSA:3.90.25.10 250 296 2.3E-36 T 22-04-2016 PNUC_RS01595 4eae72f1c730b76ea3f81a5382b2aedc 309 PANTHER PTHR10366:SF246 1 305 2.2E-121 T 22-04-2016 PNUC_RS01595 4eae72f1c730b76ea3f81a5382b2aedc 309 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 1 305 44.304 T 22-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 PNUC_RS01595 4eae72f1c730b76ea3f81a5382b2aedc 309 Gene3D G3DSA:3.40.50.720 2 159 3.5E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01595 4eae72f1c730b76ea3f81a5382b2aedc 309 Gene3D G3DSA:3.40.50.720 201 249 3.5E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01595 4eae72f1c730b76ea3f81a5382b2aedc 309 SUPERFAMILY SSF51735 1 306 2.03E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS01595 4eae72f1c730b76ea3f81a5382b2aedc 309 PANTHER PTHR10366 1 305 2.2E-121 T 22-04-2016 PNUC_RS00375 7d56f18d2e0a64961bb13200bfda0861 180 PANTHER PTHR11994 1 179 1.9E-87 T 22-04-2016 PNUC_RS00375 7d56f18d2e0a64961bb13200bfda0861 180 Pfam PF00281 Ribosomal protein L5 25 81 4.2E-26 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal PNUC_RS00375 7d56f18d2e0a64961bb13200bfda0861 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 1.2E-39 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal PNUC_RS00375 7d56f18d2e0a64961bb13200bfda0861 180 SUPERFAMILY SSF55282 4 180 9.42E-77 T 22-04-2016 IPR022803 Ribosomal protein L5 domain PNUC_RS00375 7d56f18d2e0a64961bb13200bfda0861 180 PIRSF PIRSF002161 1 180 1.2E-63 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 PNUC_RS00375 7d56f18d2e0a64961bb13200bfda0861 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.619 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00375 7d56f18d2e0a64961bb13200bfda0861 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS00375 7d56f18d2e0a64961bb13200bfda0861 180 Gene3D G3DSA:3.30.1440.10 3 180 1.2E-76 T 22-04-2016 IPR022803 Ribosomal protein L5 domain PNUC_RS05010 c3ebc5122c099a50c57cfc2ecec57a59 192 PANTHER PTHR35602 1 189 9.8E-45 T 22-04-2016 PNUC_RS05010 c3ebc5122c099a50c57cfc2ecec57a59 192 PANTHER PTHR35602:SF3 1 189 9.8E-45 T 22-04-2016 PNUC_RS05010 c3ebc5122c099a50c57cfc2ecec57a59 192 Pfam PF05728 Uncharacterised protein family (UPF0227) 2 189 4.8E-47 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA PNUC_RS05010 c3ebc5122c099a50c57cfc2ecec57a59 192 SUPERFAMILY SSF53474 1 191 1.33E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS05010 c3ebc5122c099a50c57cfc2ecec57a59 192 Gene3D G3DSA:3.40.50.1820 1 187 2.4E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS08155 83dd7200c0ff7666ff9d76a7e1841cc0 114 Pfam PF07784 Protein of unknown function (DUF1622) 25 103 2.3E-22 T 22-04-2016 IPR012427 Protein of unknown function DUF1622 PNUC_RS00870 5c16ec0cabf5678206e0b3c7ae987914 88 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 13.415 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PNUC_RS00870 5c16ec0cabf5678206e0b3c7ae987914 88 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 2 83 2.9E-20 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PNUC_RS00870 5c16ec0cabf5678206e0b3c7ae987914 88 Pfam PF04999 Cell division protein FtsL 2 84 1.8E-16 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PNUC_RS00655 2295d67081d809487a4073f1be8e6c19 424 SUPERFAMILY SSF56935 16 424 1.3E-49 T 22-04-2016 PNUC_RS00655 2295d67081d809487a4073f1be8e6c19 424 Gene3D G3DSA:2.40.160.10 21 424 1.6E-54 T 22-04-2016 IPR023614 Porin domain PNUC_RS00655 2295d67081d809487a4073f1be8e6c19 424 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 365 382 1.3E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 PNUC_RS00655 2295d67081d809487a4073f1be8e6c19 424 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 107 117 1.3E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 PNUC_RS00655 2295d67081d809487a4073f1be8e6c19 424 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 63 74 1.3E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 PNUC_RS00655 2295d67081d809487a4073f1be8e6c19 424 Pfam PF13609 Gram-negative porin 7 390 4.1E-38 T 22-04-2016 PNUC_RS07295 5bd865305c0b45b96113d269de51b32e 235 Pfam PF00005 ABC transporter 35 157 3.1E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS07295 5bd865305c0b45b96113d269de51b32e 235 PANTHER PTHR24220 13 235 1.5E-45 T 22-04-2016 PNUC_RS07295 5bd865305c0b45b96113d269de51b32e 235 SMART SM00382 36 205 2.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS07295 5bd865305c0b45b96113d269de51b32e 235 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PNUC_RS07295 5bd865305c0b45b96113d269de51b32e 235 Gene3D G3DSA:3.40.50.300 11 229 7.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07295 5bd865305c0b45b96113d269de51b32e 235 SUPERFAMILY SSF52540 9 224 7.99E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04725 bb1ebbaf6251129c4a7cdffb891c8cdf 121 SUPERFAMILY SSF46626 1 111 3.2E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04725 bb1ebbaf6251129c4a7cdffb891c8cdf 121 Gene3D G3DSA:1.10.760.10 31 111 1.3E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04725 bb1ebbaf6251129c4a7cdffb891c8cdf 121 PANTHER PTHR33751:SF3 60 120 1.1E-12 T 22-04-2016 PNUC_RS04725 bb1ebbaf6251129c4a7cdffb891c8cdf 121 PANTHER PTHR33751 60 120 1.1E-12 T 22-04-2016 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 PANTHER PTHR23135:SF18 377 855 7.5E-115 T 22-04-2016 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 SUPERFAMILY SSF53244 711 839 6.11E-25 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 SUPERFAMILY SSF53623 433 725 8.63E-43 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 Pfam PF08443 RimK-like ATP-grasp domain 202 306 3.6E-5 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 Pfam PF02875 Mur ligase family, glutamate ligase domain 711 791 1.2E-12 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 473 496 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 Gene3D G3DSA:3.30.470.20 201 320 7.9E-24 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 Gene3D G3DSA:3.30.470.20 383 442 7.9E-24 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 853 0.0 T 22-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 SUPERFAMILY SSF56059 370 462 1.36E-30 T 22-04-2016 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 SUPERFAMILY SSF56059 204 334 1.36E-30 T 22-04-2016 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 Gene3D G3DSA:3.90.190.20 714 839 3.2E-22 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 Pfam PF08245 Mur ligase middle domain 475 687 5.3E-23 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 PANTHER PTHR23135 377 855 7.5E-115 T 22-04-2016 PNUC_RS03490 37a5564c1189b11ce9c81cb2fb67ac35 856 Gene3D G3DSA:3.40.1190.10 469 706 3.0E-41 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PNUC_RS00320 610bf996948eb8e0400876a0ded487ea 206 Pfam PF00573 Ribosomal protein L4/L1 family 17 203 4.4E-62 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 PNUC_RS00320 610bf996948eb8e0400876a0ded487ea 206 SUPERFAMILY SSF52166 1 205 5.23E-66 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 PNUC_RS00320 610bf996948eb8e0400876a0ded487ea 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.537 T 22-04-2016 IPR013005 50S ribosomal protein uL4 PNUC_RS00320 610bf996948eb8e0400876a0ded487ea 206 Gene3D G3DSA:3.40.1370.10 58 205 2.0E-53 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 PNUC_RS00320 610bf996948eb8e0400876a0ded487ea 206 PANTHER PTHR10746 13 205 1.2E-68 T 22-04-2016 IPR013005 50S ribosomal protein uL4 PNUC_RS00320 610bf996948eb8e0400876a0ded487ea 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 203 5.7E-71 T 22-04-2016 IPR013005 50S ribosomal protein uL4 PNUC_RS08605 8a54fe7c514b741980815154568d899f 333 Pfam PF13450 NAD(P)-binding Rossmann-like domain 13 66 5.7E-14 T 22-04-2016 PNUC_RS08605 8a54fe7c514b741980815154568d899f 333 Gene3D G3DSA:3.90.660.10 195 285 1.7E-48 T 22-04-2016 PNUC_RS08605 8a54fe7c514b741980815154568d899f 333 Gene3D G3DSA:3.90.660.10 49 116 1.7E-48 T 22-04-2016 PNUC_RS08605 8a54fe7c514b741980815154568d899f 333 Pfam PF01593 Flavin containing amine oxidoreductase 95 328 6.5E-5 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 PNUC_RS08605 8a54fe7c514b741980815154568d899f 333 SUPERFAMILY SSF51905 292 328 4.28E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08605 8a54fe7c514b741980815154568d899f 333 SUPERFAMILY SSF51905 6 204 4.28E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08605 8a54fe7c514b741980815154568d899f 333 Gene3D G3DSA:3.50.50.60 117 194 5.2E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08605 8a54fe7c514b741980815154568d899f 333 Gene3D G3DSA:3.50.50.60 8 47 5.2E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08605 8a54fe7c514b741980815154568d899f 333 Gene3D G3DSA:3.50.50.60 292 330 5.2E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS08605 8a54fe7c514b741980815154568d899f 333 PANTHER PTHR16128 10 328 5.1E-63 T 22-04-2016 PNUC_RS04840 1e07af7b0cd4e0178ae87ad371adcf68 250 SUPERFAMILY SSF53448 11 244 7.58E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS04840 1e07af7b0cd4e0178ae87ad371adcf68 250 PANTHER PTHR32125:SF4 12 244 1.6E-56 T 22-04-2016 PNUC_RS04840 1e07af7b0cd4e0178ae87ad371adcf68 250 Gene3D G3DSA:3.90.550.10 10 245 5.6E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS04840 1e07af7b0cd4e0178ae87ad371adcf68 250 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 113 120 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS04840 1e07af7b0cd4e0178ae87ad371adcf68 250 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 244 3.5E-53 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS04840 1e07af7b0cd4e0178ae87ad371adcf68 250 PANTHER PTHR32125 12 244 1.6E-56 T 22-04-2016 PNUC_RS04840 1e07af7b0cd4e0178ae87ad371adcf68 250 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 247 28.78 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS04840 1e07af7b0cd4e0178ae87ad371adcf68 250 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 13 243 5.6E-59 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PNUC_RS01465 7a9711198826582ec40cebfba5411f8d 218 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 201 7.4E-44 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PNUC_RS01465 7a9711198826582ec40cebfba5411f8d 218 PANTHER PTHR30625:SF3 1 214 1.8E-67 T 22-04-2016 PNUC_RS01465 7a9711198826582ec40cebfba5411f8d 218 TIGRFAM TIGR02796 tolQ: protein TolQ 8 213 6.0E-83 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 PNUC_RS01465 7a9711198826582ec40cebfba5411f8d 218 PANTHER PTHR30625 1 214 1.8E-67 T 22-04-2016 PNUC_RS08895 29d45168edb4236461ee2d3743e7ada4 291 Pfam PF01738 Dienelactone hydrolase family 61 287 2.1E-55 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 PNUC_RS08895 29d45168edb4236461ee2d3743e7ada4 291 SUPERFAMILY SSF53474 51 287 4.95E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS08895 29d45168edb4236461ee2d3743e7ada4 291 Gene3D G3DSA:3.40.50.1820 53 287 1.8E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS08895 29d45168edb4236461ee2d3743e7ada4 291 PANTHER PTHR17630:SF42 59 288 1.0E-82 T 22-04-2016 PNUC_RS08895 29d45168edb4236461ee2d3743e7ada4 291 PANTHER PTHR17630 59 288 1.0E-82 T 22-04-2016 PNUC_RS03580 762b7e5d9945a56b7a6da4eb125b019e 686 PANTHER PTHR31998 8 681 0.0 T 22-04-2016 PNUC_RS03580 762b7e5d9945a56b7a6da4eb125b019e 686 PIRSF PIRSF001265 1 685 6.8E-267 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 PNUC_RS03580 762b7e5d9945a56b7a6da4eb125b019e 686 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 5 682 25.664 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 PNUC_RS03580 762b7e5d9945a56b7a6da4eb125b019e 686 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 10 681 1.7E-269 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 PNUC_RS03580 762b7e5d9945a56b7a6da4eb125b019e 686 PANTHER PTHR31998:SF0 8 681 0.0 T 22-04-2016 PNUC_RS03580 762b7e5d9945a56b7a6da4eb125b019e 686 Pfam PF03030 Inorganic H+ pyrophosphatase 16 677 3.7E-270 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 PNUC_RS08420 0f2e49271c0aeffb0d092f0b7c3a5d31 126 Gene3D G3DSA:2.60.120.10 40 90 5.7E-6 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS08420 0f2e49271c0aeffb0d092f0b7c3a5d31 126 SUPERFAMILY SSF51182 24 113 2.27E-6 T 22-04-2016 IPR011051 RmlC-like cupin domain PNUC_RS06175 c759bbf2c2bff90419088d0c19358b41 409 Gene3D G3DSA:3.30.450.40 28 191 2.2E-20 T 22-04-2016 IPR029016 GAF domain-like PNUC_RS06175 c759bbf2c2bff90419088d0c19358b41 409 Pfam PF01590 GAF domain 48 187 6.1E-5 T 22-04-2016 IPR003018 GAF domain GO:0005515 PNUC_RS06175 c759bbf2c2bff90419088d0c19358b41 409 SUPERFAMILY SSF55781 22 197 3.71E-16 T 22-04-2016 IPR029016 GAF domain-like PNUC_RS06175 c759bbf2c2bff90419088d0c19358b41 409 SUPERFAMILY SSF109604 222 396 7.4E-38 T 22-04-2016 PNUC_RS06175 c759bbf2c2bff90419088d0c19358b41 409 SMART SM00471 231 366 2.0E-10 T 22-04-2016 IPR003607 HD/PDEase domain PNUC_RS06175 c759bbf2c2bff90419088d0c19358b41 409 TIGRFAM TIGR00277 HDIG: HDIG domain 235 325 1.5E-8 T 22-04-2016 IPR006675 HDIG domain PNUC_RS06175 c759bbf2c2bff90419088d0c19358b41 409 Pfam PF01966 HD domain 236 357 4.0E-20 T 22-04-2016 IPR006674 HD domain PNUC_RS06175 c759bbf2c2bff90419088d0c19358b41 409 Gene3D G3DSA:1.10.3210.10 221 397 6.8E-25 T 22-04-2016 IPR006674 HD domain PNUC_RS08485 ac9cd8c8a5a4e6cfa65181fb1e833425 192 PANTHER PTHR11019:SF112 4 94 1.5E-53 T 22-04-2016 PNUC_RS08485 ac9cd8c8a5a4e6cfa65181fb1e833425 192 PANTHER PTHR11019:SF112 112 141 1.5E-53 T 22-04-2016 PNUC_RS08485 ac9cd8c8a5a4e6cfa65181fb1e833425 192 Gene3D G3DSA:3.40.50.880 3 186 1.8E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS08485 ac9cd8c8a5a4e6cfa65181fb1e833425 192 SUPERFAMILY SSF52317 4 188 6.45E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PNUC_RS08485 ac9cd8c8a5a4e6cfa65181fb1e833425 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 187 1.1E-57 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 PNUC_RS08485 ac9cd8c8a5a4e6cfa65181fb1e833425 192 Pfam PF01965 DJ-1/PfpI family 4 184 9.1E-49 T 22-04-2016 IPR002818 DJ-1/PfpI PNUC_RS08485 ac9cd8c8a5a4e6cfa65181fb1e833425 192 PANTHER PTHR11019 4 94 1.5E-53 T 22-04-2016 PNUC_RS08485 ac9cd8c8a5a4e6cfa65181fb1e833425 192 PANTHER PTHR11019 112 141 1.5E-53 T 22-04-2016 PNUC_RS03340 2c09b7d84ee4035c8592dde74e2e8767 415 Gene3D G3DSA:3.40.50.10540 326 415 1.3E-105 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS03340 2c09b7d84ee4035c8592dde74e2e8767 415 Gene3D G3DSA:3.40.50.10540 2 215 1.3E-105 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS03340 2c09b7d84ee4035c8592dde74e2e8767 415 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 3 415 4.1E-221 T 22-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 PNUC_RS03340 2c09b7d84ee4035c8592dde74e2e8767 415 PANTHER PTHR24023 50 212 2.6E-25 T 22-04-2016 PNUC_RS03340 2c09b7d84ee4035c8592dde74e2e8767 415 PANTHER PTHR24023 254 402 2.6E-25 T 22-04-2016 PNUC_RS03340 2c09b7d84ee4035c8592dde74e2e8767 415 Pfam PF02515 CoA-transferase family III 5 392 4.9E-98 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 PNUC_RS03340 2c09b7d84ee4035c8592dde74e2e8767 415 PANTHER PTHR24023:SF593 50 212 2.6E-25 T 22-04-2016 PNUC_RS03340 2c09b7d84ee4035c8592dde74e2e8767 415 PANTHER PTHR24023:SF593 254 402 2.6E-25 T 22-04-2016 PNUC_RS03340 2c09b7d84ee4035c8592dde74e2e8767 415 Gene3D G3DSA:3.30.1540.10 245 325 5.1E-29 T 22-04-2016 PNUC_RS03340 2c09b7d84ee4035c8592dde74e2e8767 415 SUPERFAMILY SSF89796 1 415 3.27E-122 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS03340 2c09b7d84ee4035c8592dde74e2e8767 415 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 415 65.074 T 22-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 PNUC_RS00845 5a77cc987ed77ad8b8698a7bb2cad9f7 471 Pfam PF00202 Aminotransferase class-III 56 466 3.6E-114 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PNUC_RS00845 5a77cc987ed77ad8b8698a7bb2cad9f7 471 PANTHER PTHR11986:SF8 22 468 8.0E-165 T 22-04-2016 PNUC_RS00845 5a77cc987ed77ad8b8698a7bb2cad9f7 471 SUPERFAMILY SSF53383 40 467 7.94E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS00845 5a77cc987ed77ad8b8698a7bb2cad9f7 471 PIRSF PIRSF000521 47 469 3.2E-30 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PNUC_RS00845 5a77cc987ed77ad8b8698a7bb2cad9f7 471 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 43 466 1.6E-160 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 PNUC_RS00845 5a77cc987ed77ad8b8698a7bb2cad9f7 471 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 280 317 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PNUC_RS00845 5a77cc987ed77ad8b8698a7bb2cad9f7 471 Gene3D G3DSA:3.90.1150.10 371 469 2.8E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS00845 5a77cc987ed77ad8b8698a7bb2cad9f7 471 Gene3D G3DSA:3.90.1150.10 34 93 2.8E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS00845 5a77cc987ed77ad8b8698a7bb2cad9f7 471 Gene3D G3DSA:3.40.640.10 94 368 3.4E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS00845 5a77cc987ed77ad8b8698a7bb2cad9f7 471 PANTHER PTHR11986 22 468 8.0E-165 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PNUC_RS08525 5aeb12d305cf6b6f298d788a01c16401 298 PANTHER PTHR12715:SF9 2 291 6.9E-67 T 22-04-2016 PNUC_RS08525 5aeb12d305cf6b6f298d788a01c16401 298 PANTHER PTHR12715 2 291 6.9E-67 T 22-04-2016 PNUC_RS08525 5aeb12d305cf6b6f298d788a01c16401 298 SUPERFAMILY SSF103481 40 134 5.1E-10 T 22-04-2016 PNUC_RS08525 5aeb12d305cf6b6f298d788a01c16401 298 Pfam PF00892 EamA-like transporter family 6 130 1.1E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PNUC_RS08525 5aeb12d305cf6b6f298d788a01c16401 298 Pfam PF00892 EamA-like transporter family 150 286 3.0E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PNUC_RS10030 7a47ad13acbb469569cd853307f408da 70 Pfam PF11137 Protein of unknown function (DUF2909) 1 60 8.9E-24 T 22-04-2016 IPR021313 Protein of unknown function DUF2909 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 SUPERFAMILY SSF48439 58 275 4.71E-54 T 22-04-2016 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 Pfam PF13181 Tetratricopeptide repeat 142 175 0.07 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 Pfam PF13432 Tetratricopeptide repeat 216 276 1.0E-6 T 22-04-2016 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 PANTHER PTHR23083 709 715 7.3E-60 T 22-04-2016 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 PANTHER PTHR23083 9 276 7.3E-60 T 22-04-2016 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 Pfam PF13844 Glycosyl transferase family 41 517 711 1.4E-45 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 Pfam PF13844 Glycosyl transferase family 41 359 512 8.4E-31 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 Gene3D G3DSA:1.25.40.10 31 138 6.9E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 SMART SM00028 142 175 1.7E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 SMART SM00028 108 141 1.3E-9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 SMART SM00028 176 209 0.0013 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 SMART SM00028 40 73 0.0063 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 SMART SM00028 210 243 0.0033 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 SMART SM00028 244 277 2.6E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 SMART SM00028 74 107 6.1E-8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 Pfam PF13424 Tetratricopeptide repeat 76 138 8.4E-12 T 22-04-2016 PNUC_RS00660 ef31edf11dcb63b2321e3c9b9d5f77b0 732 Gene3D G3DSA:1.25.40.10 139 276 1.9E-39 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS04985 af1087ecf3623d3e1ced04dbadc9879d 78 SUPERFAMILY SSF47336 2 73 4.58E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain PNUC_RS04985 af1087ecf3623d3e1ced04dbadc9879d 78 Gene3D G3DSA:1.10.1200.10 2 73 1.5E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain PNUC_RS04985 af1087ecf3623d3e1ced04dbadc9879d 78 Pfam PF00550 Phosphopantetheine attachment site 7 71 7.1E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain PNUC_RS03725 f9217717c249b46af7d77531b59db883 70 PANTHER PTHR36508 1 70 3.3E-16 T 22-04-2016 PNUC_RS03725 f9217717c249b46af7d77531b59db883 70 Gene3D G3DSA:1.20.5.300 7 50 8.2E-12 T 22-04-2016 PNUC_RS03725 f9217717c249b46af7d77531b59db883 70 Pfam PF04102 SlyX 7 70 2.0E-20 T 22-04-2016 IPR007236 SlyX PNUC_RS02635 56cf7753c9539d5975aab4ac9c87d4e2 342 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 331 57.988 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 PNUC_RS02635 56cf7753c9539d5975aab4ac9c87d4e2 342 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 243 2.3E-41 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PNUC_RS02635 56cf7753c9539d5975aab4ac9c87d4e2 342 SUPERFAMILY SSF51735 2 331 6.1E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02635 56cf7753c9539d5975aab4ac9c87d4e2 342 Gene3D G3DSA:3.90.25.10 173 313 6.1E-35 T 22-04-2016 PNUC_RS02635 56cf7753c9539d5975aab4ac9c87d4e2 342 PANTHER PTHR10366:SF469 2 261 1.2E-95 T 22-04-2016 PNUC_RS02635 56cf7753c9539d5975aab4ac9c87d4e2 342 PANTHER PTHR10366:SF469 278 330 1.2E-95 T 22-04-2016 PNUC_RS02635 56cf7753c9539d5975aab4ac9c87d4e2 342 Gene3D G3DSA:3.40.50.720 2 172 2.6E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS02635 56cf7753c9539d5975aab4ac9c87d4e2 342 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 330 6.1E-135 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 PNUC_RS02635 56cf7753c9539d5975aab4ac9c87d4e2 342 PANTHER PTHR10366 2 261 1.2E-95 T 22-04-2016 PNUC_RS02635 56cf7753c9539d5975aab4ac9c87d4e2 342 PANTHER PTHR10366 278 330 1.2E-95 T 22-04-2016 PNUC_RS04980 7e17b1ca998762e6288fde68a0fb3fbe 149 Pfam PF13493 Domain of unknown function (DUF4118) 19 117 7.1E-10 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain PNUC_RS04980 7e17b1ca998762e6288fde68a0fb3fbe 149 Gene3D G3DSA:1.20.120.620 18 116 9.8E-8 T 22-04-2016 PNUC_RS07025 71e5eb56e8d505a83fc536a38b3c8b06 142 PANTHER PTHR31793 1 139 1.8E-21 T 22-04-2016 PNUC_RS07025 71e5eb56e8d505a83fc536a38b3c8b06 142 Gene3D G3DSA:3.10.129.10 8 138 9.3E-30 T 22-04-2016 IPR029069 HotDog domain PNUC_RS07025 71e5eb56e8d505a83fc536a38b3c8b06 142 SUPERFAMILY SSF54637 5 138 2.95E-28 T 22-04-2016 IPR029069 HotDog domain PNUC_RS07025 71e5eb56e8d505a83fc536a38b3c8b06 142 PIRSF PIRSF003230 1 141 1.1E-27 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PNUC_RS07025 71e5eb56e8d505a83fc536a38b3c8b06 142 Pfam PF03061 Thioesterase superfamily 23 98 2.5E-10 T 22-04-2016 IPR006683 Thioesterase domain PNUC_RS07025 71e5eb56e8d505a83fc536a38b3c8b06 142 PANTHER PTHR31793:SF9 1 139 1.8E-21 T 22-04-2016 PNUC_RS01240 a50b0a705216d6bebf1276f18191566e 175 Pfam PF04390 Lipopolysaccharide-assembly 20 163 8.0E-15 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PNUC_RS01240 a50b0a705216d6bebf1276f18191566e 175 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 10 168 17.662 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PNUC_RS01240 a50b0a705216d6bebf1276f18191566e 175 Gene3D G3DSA:3.30.160.150 25 171 1.6E-27 T 22-04-2016 PNUC_RS06820 0bc4c56d43bfbb3d3d31fe9c8520d0f9 419 Gene3D G3DSA:2.40.50.100 232 263 8.7E-9 T 22-04-2016 PNUC_RS06820 0bc4c56d43bfbb3d3d31fe9c8520d0f9 419 Gene3D G3DSA:2.40.50.100 136 166 8.7E-9 T 22-04-2016 PNUC_RS06820 0bc4c56d43bfbb3d3d31fe9c8520d0f9 419 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 119 338 4.4E-57 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PNUC_RS06820 0bc4c56d43bfbb3d3d31fe9c8520d0f9 419 PANTHER PTHR30097 119 412 6.6E-53 T 22-04-2016 PNUC_RS06820 0bc4c56d43bfbb3d3d31fe9c8520d0f9 419 SUPERFAMILY SSF111369 129 345 2.35E-14 T 22-04-2016 PNUC_RS06820 0bc4c56d43bfbb3d3d31fe9c8520d0f9 419 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 111 412 1.7E-34 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PNUC_RS06820 0bc4c56d43bfbb3d3d31fe9c8520d0f9 419 PANTHER PTHR30097:SF3 119 412 6.6E-53 T 22-04-2016 PNUC_RS05515 a49fda6357f4bdfd0f663ab1f3cee997 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.603 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 PNUC_RS05515 a49fda6357f4bdfd0f663ab1f3cee997 89 SMART SM01387 7 88 1.2E-52 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS05515 a49fda6357f4bdfd0f663ab1f3cee997 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS05515 a49fda6357f4bdfd0f663ab1f3cee997 89 PANTHER PTHR23321 6 88 1.4E-41 T 22-04-2016 PNUC_RS05515 a49fda6357f4bdfd0f663ab1f3cee997 89 Gene3D G3DSA:1.10.287.10 5 89 3.4E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 PNUC_RS05515 a49fda6357f4bdfd0f663ab1f3cee997 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.7E-38 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 PNUC_RS05515 a49fda6357f4bdfd0f663ab1f3cee997 89 SUPERFAMILY SSF47060 5 89 2.06E-34 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 PNUC_RS05515 a49fda6357f4bdfd0f663ab1f3cee997 89 Pfam PF00312 Ribosomal protein S15 9 88 2.5E-37 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS05515 a49fda6357f4bdfd0f663ab1f3cee997 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-33 T 22-04-2016 PNUC_RS07040 d78171a4b2990ca1555364676d2d2f76 369 PANTHER PTHR38339 18 368 1.6E-43 T 22-04-2016 PNUC_RS07040 d78171a4b2990ca1555364676d2d2f76 369 Pfam PF01841 Transglutaminase-like superfamily 167 278 1.0E-22 T 22-04-2016 IPR002931 Transglutaminase-like PNUC_RS07040 d78171a4b2990ca1555364676d2d2f76 369 SMART SM00460 206 280 2.3E-16 T 22-04-2016 IPR002931 Transglutaminase-like PNUC_RS07040 d78171a4b2990ca1555364676d2d2f76 369 SUPERFAMILY SSF54001 161 279 1.2E-21 T 22-04-2016 PNUC_RS07040 d78171a4b2990ca1555364676d2d2f76 369 Gene3D G3DSA:3.90.260.10 210 283 3.8E-7 T 22-04-2016 IPR002931 Transglutaminase-like PNUC_RS05635 6f842f9a6de120eff9bec8eff0374b20 309 Pfam PF08340 Domain of unknown function (DUF1732) 225 309 2.3E-33 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 PNUC_RS05635 6f842f9a6de120eff9bec8eff0374b20 309 Pfam PF03755 YicC-like family, N-terminal region 2 166 2.8E-40 T 22-04-2016 IPR013527 YicC-like, N-terminal PNUC_RS05635 6f842f9a6de120eff9bec8eff0374b20 309 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 309 2.2E-63 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 PNUC_RS05635 6f842f9a6de120eff9bec8eff0374b20 309 PANTHER PTHR30636 1 309 1.8E-79 T 22-04-2016 PNUC_RS05040 a3ba48b55c253ad6fa4836a93a8e96c8 377 PANTHER PTHR11669 14 90 1.9E-45 T 22-04-2016 PNUC_RS05040 a3ba48b55c253ad6fa4836a93a8e96c8 377 PANTHER PTHR11669 128 244 1.9E-45 T 22-04-2016 PNUC_RS05040 a3ba48b55c253ad6fa4836a93a8e96c8 377 SUPERFAMILY SSF52540 13 86 8.18E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05040 a3ba48b55c253ad6fa4836a93a8e96c8 377 SUPERFAMILY SSF52540 121 245 8.18E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05040 a3ba48b55c253ad6fa4836a93a8e96c8 377 Pfam PF13177 DNA polymerase III, delta subunit 23 200 2.4E-39 T 22-04-2016 PNUC_RS05040 a3ba48b55c253ad6fa4836a93a8e96c8 377 PANTHER PTHR11669:SF8 14 90 1.9E-45 T 22-04-2016 PNUC_RS05040 a3ba48b55c253ad6fa4836a93a8e96c8 377 PANTHER PTHR11669:SF8 128 244 1.9E-45 T 22-04-2016 PNUC_RS05040 a3ba48b55c253ad6fa4836a93a8e96c8 377 Gene3D G3DSA:3.40.50.300 120 203 3.3E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05040 a3ba48b55c253ad6fa4836a93a8e96c8 377 Gene3D G3DSA:3.40.50.300 17 85 3.3E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04540 622cb48d31cfb01bb51dafda523547f3 309 PANTHER PTHR10277:SF1 2 292 1.6E-108 T 22-04-2016 PNUC_RS04540 622cb48d31cfb01bb51dafda523547f3 309 SUPERFAMILY SSF51569 2 292 2.75E-67 T 22-04-2016 PNUC_RS04540 622cb48d31cfb01bb51dafda523547f3 309 Gene3D G3DSA:3.20.20.70 2 279 9.1E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS04540 622cb48d31cfb01bb51dafda523547f3 309 PANTHER PTHR10277 2 292 1.6E-108 T 22-04-2016 PNUC_RS04540 622cb48d31cfb01bb51dafda523547f3 309 Pfam PF00682 HMGL-like 4 274 1.8E-45 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 SUPERFAMILY SSF52518 65 485 4.0E-125 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 Gene3D G3DSA:3.40.50.920 722 878 4.6E-48 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 87 315 5.7E-9 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 PANTHER PTHR11624 487 551 0.0 T 22-04-2016 IPR033247 Transketolase family PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 PANTHER PTHR11624 569 786 0.0 T 22-04-2016 IPR033247 Transketolase family PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 PANTHER PTHR11624 804 869 0.0 T 22-04-2016 IPR033247 Transketolase family PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 PANTHER PTHR11624 379 470 0.0 T 22-04-2016 IPR033247 Transketolase family PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 PANTHER PTHR11624 82 310 0.0 T 22-04-2016 IPR033247 Transketolase family PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 Gene3D G3DSA:3.40.50.970 65 486 1.3E-141 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 15 878 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 SUPERFAMILY SSF52518 489 716 5.0E-92 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 PANTHER PTHR11624:SF67 487 551 0.0 T 22-04-2016 PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 PANTHER PTHR11624:SF67 569 786 0.0 T 22-04-2016 PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 PANTHER PTHR11624:SF67 804 869 0.0 T 22-04-2016 PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 PANTHER PTHR11624:SF67 379 470 0.0 T 22-04-2016 PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 PANTHER PTHR11624:SF67 82 310 0.0 T 22-04-2016 PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 Gene3D G3DSA:3.40.50.970 488 720 7.0E-110 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 PIRSF PIRSF000156 5 879 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 SUPERFAMILY SSF52922 718 877 1.08E-33 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PNUC_RS08095 a686e2862f6aba5a148b5390128eae49 879 TIGRFAM TIGR03186 AKGDH_not_PDH: alpha-ketoglutarate dehydrogenase 14 877 0.0 T 22-04-2016 IPR017600 Alpha-ketoglutarate dehydrogenase PNUC_RS00050 1b8e950251117658e141f34ba48a9d2f 318 PANTHER PTHR30482:SF8 7 314 2.3E-103 T 22-04-2016 PNUC_RS00050 1b8e950251117658e141f34ba48a9d2f 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 27 302 1.1E-30 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PNUC_RS00050 1b8e950251117658e141f34ba48a9d2f 318 PANTHER PTHR30482 7 314 2.3E-103 T 22-04-2016 PNUC_RS00970 3fecd05f99966bf166fa79736ea48593 288 Gene3D G3DSA:3.40.50.300 56 231 1.9E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00970 3fecd05f99966bf166fa79736ea48593 288 PANTHER PTHR13779 28 189 1.6E-73 T 22-04-2016 PNUC_RS00970 3fecd05f99966bf166fa79736ea48593 288 Pfam PF05673 Protein of unknown function (DUF815) 31 286 1.2E-104 T 22-04-2016 IPR008533 Domain of unknown function DUF815 PNUC_RS00970 3fecd05f99966bf166fa79736ea48593 288 PANTHER PTHR13779:SF28 28 189 1.6E-73 T 22-04-2016 PNUC_RS00970 3fecd05f99966bf166fa79736ea48593 288 PANTHER PTHR13779:SF28 217 285 1.6E-73 T 22-04-2016 PNUC_RS00970 3fecd05f99966bf166fa79736ea48593 288 PANTHER PTHR13779 217 285 1.6E-73 T 22-04-2016 PNUC_RS00970 3fecd05f99966bf166fa79736ea48593 288 SUPERFAMILY SSF52540 47 194 7.22E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02830 f874b78d7063bbe506d053174be40882 306 PANTHER PTHR31126:SF21 41 120 6.6E-44 T 22-04-2016 PNUC_RS02830 f874b78d7063bbe506d053174be40882 306 PANTHER PTHR31126:SF21 160 301 6.6E-44 T 22-04-2016 PNUC_RS02830 f874b78d7063bbe506d053174be40882 306 PANTHER PTHR31126 41 120 6.6E-44 T 22-04-2016 PNUC_RS02830 f874b78d7063bbe506d053174be40882 306 PANTHER PTHR31126 160 301 6.6E-44 T 22-04-2016 PNUC_RS02830 f874b78d7063bbe506d053174be40882 306 SUPERFAMILY SSF52799 41 299 8.35E-45 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like PNUC_RS02830 f874b78d7063bbe506d053174be40882 306 Pfam PF13350 Tyrosine phosphatase family 42 299 2.5E-59 T 22-04-2016 IPR026893 Tyrosine/serine-protein phosphatase IphP-type PNUC_RS02830 f874b78d7063bbe506d053174be40882 306 Gene3D G3DSA:3.90.190.10 168 236 2.0E-18 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like PNUC_RS02830 f874b78d7063bbe506d053174be40882 306 Gene3D G3DSA:3.90.190.10 45 127 2.0E-18 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like PNUC_RS06475 d60de4fb3d8351f8e5dab6115a43eb97 214 Gene3D G3DSA:3.90.1720.10 62 187 3.6E-40 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS06475 d60de4fb3d8351f8e5dab6115a43eb97 214 PANTHER PTHR21666 69 194 4.9E-33 T 22-04-2016 PNUC_RS06475 d60de4fb3d8351f8e5dab6115a43eb97 214 Pfam PF00877 NlpC/P60 family 78 185 7.5E-24 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS06475 d60de4fb3d8351f8e5dab6115a43eb97 214 SUPERFAMILY SSF54001 61 186 2.35E-36 T 22-04-2016 PNUC_RS06135 f7637978aaf96b2648f7955de75f2dfc 337 SUPERFAMILY SSF48208 6 332 5.67E-85 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PNUC_RS06135 f7637978aaf96b2648f7955de75f2dfc 337 Pfam PF01270 Glycosyl hydrolases family 8 12 329 1.6E-71 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PNUC_RS06135 f7637978aaf96b2648f7955de75f2dfc 337 PRINTS PR00735 Glycosyl hydrolase family 8 signature 234 243 2.2E-16 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PNUC_RS06135 f7637978aaf96b2648f7955de75f2dfc 337 PRINTS PR00735 Glycosyl hydrolase family 8 signature 52 65 2.2E-16 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PNUC_RS06135 f7637978aaf96b2648f7955de75f2dfc 337 PRINTS PR00735 Glycosyl hydrolase family 8 signature 319 333 2.2E-16 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PNUC_RS06135 f7637978aaf96b2648f7955de75f2dfc 337 PRINTS PR00735 Glycosyl hydrolase family 8 signature 212 223 2.2E-16 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PNUC_RS06135 f7637978aaf96b2648f7955de75f2dfc 337 PRINTS PR00735 Glycosyl hydrolase family 8 signature 108 126 2.2E-16 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PNUC_RS06135 f7637978aaf96b2648f7955de75f2dfc 337 Gene3D G3DSA:1.50.10.10 21 331 4.2E-74 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 PNUC_RS01350 dba65719400fc7bf300a4ca8363a71f4 309 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 6 290 4.2E-155 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PNUC_RS01350 dba65719400fc7bf300a4ca8363a71f4 309 SUPERFAMILY SSF53448 5 290 3.03E-91 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS01350 dba65719400fc7bf300a4ca8363a71f4 309 Gene3D G3DSA:3.90.550.10 5 270 7.3E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS01350 dba65719400fc7bf300a4ca8363a71f4 309 PANTHER PTHR22572 6 273 7.1E-178 T 22-04-2016 PNUC_RS01350 dba65719400fc7bf300a4ca8363a71f4 309 PANTHER PTHR22572:SF105 6 273 7.1E-178 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PNUC_RS01350 dba65719400fc7bf300a4ca8363a71f4 309 Pfam PF00483 Nucleotidyl transferase 6 241 7.6E-69 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PNUC_RS06010 572b3860ec644ef5e91198732b63db9d 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 136 2.0E-32 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PNUC_RS06010 572b3860ec644ef5e91198732b63db9d 137 PANTHER PTHR30558:SF3 3 136 2.7E-35 T 22-04-2016 PNUC_RS06010 572b3860ec644ef5e91198732b63db9d 137 PANTHER PTHR30558 3 136 2.7E-35 T 22-04-2016 PNUC_RS08395 6762ea4bac603db7e15062a0e3a9416b 386 SUPERFAMILY SSF89796 3 381 8.11E-121 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS08395 6762ea4bac603db7e15062a0e3a9416b 386 Gene3D G3DSA:3.40.50.10540 3 217 3.4E-103 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS08395 6762ea4bac603db7e15062a0e3a9416b 386 Gene3D G3DSA:3.40.50.10540 306 383 3.4E-103 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS08395 6762ea4bac603db7e15062a0e3a9416b 386 PANTHER PTHR24023:SF593 69 373 6.7E-24 T 22-04-2016 PNUC_RS08395 6762ea4bac603db7e15062a0e3a9416b 386 Gene3D G3DSA:3.30.1540.10 223 305 2.9E-28 T 22-04-2016 PNUC_RS08395 6762ea4bac603db7e15062a0e3a9416b 386 Pfam PF02515 CoA-transferase family III 7 372 6.8E-119 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 PNUC_RS08395 6762ea4bac603db7e15062a0e3a9416b 386 PANTHER PTHR24023 69 373 6.7E-24 T 22-04-2016 PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 207 218 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 Pfam PF02926 THUMP domain 54 166 1.0E-9 T 22-04-2016 IPR004114 THUMP domain GO:0003723 PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 SUPERFAMILY SSF53335 300 361 2.11E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 SUPERFAMILY SSF53335 153 229 2.11E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 SUPERFAMILY SSF53335 414 469 2.11E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 SMART SM00981 68 166 3.5E-21 T 22-04-2016 IPR004114 THUMP domain GO:0003723 PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 Pfam PF01170 Putative RNA methylase family UPF0020 174 358 2.3E-31 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 PANTHER PTHR14911:SF13 1 224 1.6E-42 T 22-04-2016 PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 PANTHER PTHR14911:SF13 297 372 1.6E-42 T 22-04-2016 PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 PANTHER PTHR14911:SF13 418 471 1.6E-42 T 22-04-2016 PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 PANTHER PTHR14911 1 224 1.6E-42 T 22-04-2016 PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 PANTHER PTHR14911 297 372 1.6E-42 T 22-04-2016 PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 PANTHER PTHR14911 418 471 1.6E-42 T 22-04-2016 PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 Gene3D G3DSA:3.40.50.150 159 226 4.1E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 Gene3D G3DSA:3.40.50.150 297 358 4.1E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS01260 2c89ba756b2c667b22373f325fcb32ef 485 Gene3D G3DSA:3.40.50.150 406 469 4.1E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS09090 8fad247c13b5621ec198ceabe2c410ee 118 Gene3D G3DSA:3.30.1390.10 22 118 3.1E-40 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PNUC_RS09090 8fad247c13b5621ec198ceabe2c410ee 118 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 36 114 1.0E-31 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 PNUC_RS09090 8fad247c13b5621ec198ceabe2c410ee 118 PANTHER PTHR33473 19 116 2.7E-32 T 22-04-2016 PNUC_RS09090 8fad247c13b5621ec198ceabe2c410ee 118 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 17 113 27.301 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS PNUC_RS09090 8fad247c13b5621ec198ceabe2c410ee 118 SUPERFAMILY SSF54736 32 117 1.83E-30 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PNUC_RS08160 bd152b9bbf7befb7db560bcc1fb01792 180 SMART SM00900 90 171 5.7E-12 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PNUC_RS08160 bd152b9bbf7befb7db560bcc1fb01792 180 Pfam PF04205 FMN-binding domain 90 167 8.5E-11 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PNUC_RS04940 3bd44194de00cfdd302102cad87b74c0 105 PANTHER PTHR37485:SF1 2 105 3.1E-29 T 22-04-2016 PNUC_RS04940 3bd44194de00cfdd302102cad87b74c0 105 Pfam PF04977 Septum formation initiator 11 87 1.7E-22 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PNUC_RS04940 3bd44194de00cfdd302102cad87b74c0 105 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 34.042 T 22-04-2016 IPR023081 Cell division protein FtsB PNUC_RS04940 3bd44194de00cfdd302102cad87b74c0 105 PANTHER PTHR37485 2 105 3.1E-29 T 22-04-2016 PNUC_RS00570 4a2b4b36d149fdae5dad37cc880461ee 253 PIRSF PIRSF006648 7 250 9.2E-22 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS00570 4a2b4b36d149fdae5dad37cc880461ee 253 PANTHER PTHR30413 7 252 1.3E-59 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS00570 4a2b4b36d149fdae5dad37cc880461ee 253 Pfam PF01061 ABC-2 type transporter 9 216 7.3E-37 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 PNUC_RS00570 4a2b4b36d149fdae5dad37cc880461ee 253 PANTHER PTHR30413:SF2 7 252 1.3E-59 T 22-04-2016 PNUC_RS00570 4a2b4b36d149fdae5dad37cc880461ee 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 9.4E-10 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS00570 4a2b4b36d149fdae5dad37cc880461ee 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 9.4E-10 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS00570 4a2b4b36d149fdae5dad37cc880461ee 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 9.4E-10 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 Gene3D G3DSA:3.30.365.10 40 195 1.4E-31 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 Gene3D G3DSA:3.30.365.10 397 562 3.2E-32 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 PANTHER PTHR11908:SF2 131 736 1.4E-168 T 22-04-2016 PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 SUPERFAMILY SSF56003 325 734 3.95E-100 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 PIRSF PIRSF036389 1 737 1.4E-214 T 22-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 PANTHER PTHR11908 131 736 1.4E-168 T 22-04-2016 PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 SMART SM01008 219 298 1.0E-22 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 597 684 6.2E-11 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 325 565 2.8E-31 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 50 186 2.9E-11 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 SUPERFAMILY SSF56003 51 252 2.69E-37 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 Gene3D G3DSA:3.90.1170.50 196 296 2.1E-21 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PNUC_RS06090 ed09f03b9dafdcd61781145e4c0885c4 738 Gene3D G3DSA:3.30.365.10 563 733 4.2E-33 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PNUC_RS01540 4016580518745ca8494393dde3950e14 210 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 205 8.8E-59 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PNUC_RS01540 4016580518745ca8494393dde3950e14 210 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 8 204 19.641 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PNUC_RS01540 4016580518745ca8494393dde3950e14 210 PANTHER PTHR30309:SF0 1 210 5.7E-67 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PNUC_RS01540 4016580518745ca8494393dde3950e14 210 SMART SM01207 11 196 1.2E-83 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PNUC_RS01540 4016580518745ca8494393dde3950e14 210 PANTHER PTHR30309 1 210 5.7E-67 T 22-04-2016 PNUC_RS01540 4016580518745ca8494393dde3950e14 210 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 195 1.6E-51 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PNUC_RS03680 29959213b8b8792dfcf39d125fc3ee9f 161 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 65 75 1.54E-7 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PNUC_RS03680 29959213b8b8792dfcf39d125fc3ee9f 161 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 104 116 1.54E-7 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PNUC_RS03680 29959213b8b8792dfcf39d125fc3ee9f 161 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 76 87 1.54E-7 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PNUC_RS03680 29959213b8b8792dfcf39d125fc3ee9f 161 PANTHER PTHR33516 31 155 1.5E-44 T 22-04-2016 PNUC_RS03680 29959213b8b8792dfcf39d125fc3ee9f 161 PANTHER PTHR33516:SF1 31 155 1.5E-44 T 22-04-2016 PNUC_RS03680 29959213b8b8792dfcf39d125fc3ee9f 161 SUPERFAMILY SSF51306 28 150 1.57E-36 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PNUC_RS03680 29959213b8b8792dfcf39d125fc3ee9f 161 Pfam PF00717 Peptidase S24-like 68 135 4.3E-17 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B PNUC_RS03680 29959213b8b8792dfcf39d125fc3ee9f 161 Gene3D G3DSA:2.10.109.10 38 152 6.5E-47 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PNUC_RS04360 365c8d22c8232a515973df73e2522781 146 SUPERFAMILY SSF54637 23 145 2.24E-28 T 22-04-2016 IPR029069 HotDog domain PNUC_RS04360 365c8d22c8232a515973df73e2522781 146 Pfam PF03061 Thioesterase superfamily 61 134 3.6E-11 T 22-04-2016 IPR006683 Thioesterase domain PNUC_RS04360 365c8d22c8232a515973df73e2522781 146 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 30 142 5.3E-18 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain PNUC_RS04360 365c8d22c8232a515973df73e2522781 146 PANTHER PTHR12418 27 142 1.1E-21 T 22-04-2016 PNUC_RS04360 365c8d22c8232a515973df73e2522781 146 Gene3D G3DSA:3.10.129.10 28 143 4.6E-29 T 22-04-2016 IPR029069 HotDog domain PNUC_RS00635 b77036835998542acb7d72ae37798b7c 73 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 69 22.878 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PNUC_RS00635 b77036835998542acb7d72ae37798b7c 73 PANTHER PTHR33162 1 57 7.4E-18 T 22-04-2016 PNUC_RS00635 b77036835998542acb7d72ae37798b7c 73 Pfam PF02416 mttA/Hcf106 family 5 52 8.6E-15 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PNUC_RS00635 b77036835998542acb7d72ae37798b7c 73 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 6.8E-23 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PNUC_RS05650 4e404796da40a892f03379dc5dc58420 407 Pfam PF04055 Radical SAM superfamily 32 201 4.5E-21 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PNUC_RS05650 4e404796da40a892f03379dc5dc58420 407 PANTHER PTHR13932:SF7 26 407 8.4E-168 T 22-04-2016 PNUC_RS05650 4e404796da40a892f03379dc5dc58420 407 PANTHER PTHR13932 26 407 8.4E-168 T 22-04-2016 PNUC_RS05650 4e404796da40a892f03379dc5dc58420 407 SMART SM00729 27 249 7.2E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PNUC_RS05650 4e404796da40a892f03379dc5dc58420 407 Pfam PF06969 HemN C-terminal domain 334 395 5.1E-11 T 22-04-2016 IPR010723 HemN, C-terminal PNUC_RS05650 4e404796da40a892f03379dc5dc58420 407 SUPERFAMILY SSF102114 26 406 2.88E-109 T 22-04-2016 PNUC_RS05650 4e404796da40a892f03379dc5dc58420 407 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 29 397 1.3E-115 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- PNUC_RS05650 4e404796da40a892f03379dc5dc58420 407 Gene3D G3DSA:3.80.30.20 30 265 3.8E-32 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PNUC_RS05795 a2f0e3d010efcc675ba9f686ed385d4a 80 SMART SM00966 6 51 6.5E-4 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 PNUC_RS05795 a2f0e3d010efcc675ba9f686ed385d4a 80 SUPERFAMILY SSF89447 1 72 3.24E-13 T 22-04-2016 PNUC_RS05795 a2f0e3d010efcc675ba9f686ed385d4a 80 PANTHER PTHR40516 2 78 1.9E-15 T 22-04-2016 PNUC_RS05795 a2f0e3d010efcc675ba9f686ed385d4a 80 Gene3D G3DSA:2.10.260.10 1 79 1.8E-25 T 22-04-2016 PNUC_RS07070 7c9555ab4f1e9059383fdf407c28b39e 324 PIRSF PIRSF017082 1 323 3.1E-68 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS07070 7c9555ab4f1e9059383fdf407c28b39e 324 SUPERFAMILY SSF53850 110 286 2.25E-12 T 22-04-2016 PNUC_RS07070 7c9555ab4f1e9059383fdf407c28b39e 324 PANTHER PTHR30349:SF1 1 285 5.9E-77 T 22-04-2016 PNUC_RS07070 7c9555ab4f1e9059383fdf407c28b39e 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 320 7.9E-83 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS07070 7c9555ab4f1e9059383fdf407c28b39e 324 PANTHER PTHR30349 1 285 5.9E-77 T 22-04-2016 PNUC_RS09210 321bbd3fb3643f456434d607d2081a54 301 Gene3D G3DSA:3.40.50.10330 10 155 5.2E-38 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PNUC_RS09210 321bbd3fb3643f456434d607d2081a54 301 SUPERFAMILY SSF111331 15 296 1.7E-85 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain PNUC_RS09210 321bbd3fb3643f456434d607d2081a54 301 Gene3D G3DSA:2.60.200.30 156 268 3.8E-44 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PNUC_RS09210 321bbd3fb3643f456434d607d2081a54 301 Hamap MF_00361 NAD kinase [nadK]. 14 294 31.99 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PNUC_RS09210 321bbd3fb3643f456434d607d2081a54 301 Pfam PF01513 ATP-NAD kinase 64 274 1.5E-61 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PNUC_RS09210 321bbd3fb3643f456434d607d2081a54 301 PANTHER PTHR20275 10 296 1.8E-91 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PNUC_RS08480 71191b943b12706eae64156c302a7060 296 SUPERFAMILY SSF52335 7 142 1.85E-17 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PNUC_RS08480 71191b943b12706eae64156c302a7060 296 ProSitePatterns PS01335 Methylglyoxal synthase active site. 225 233 - T 22-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 PNUC_RS08480 71191b943b12706eae64156c302a7060 296 PANTHER PTHR30492 152 271 7.4E-18 T 22-04-2016 PNUC_RS08480 71191b943b12706eae64156c302a7060 296 Gene3D G3DSA:3.40.50.1380 156 293 2.1E-39 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PNUC_RS08480 71191b943b12706eae64156c302a7060 296 Gene3D G3DSA:3.40.50.1380 7 145 3.6E-27 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PNUC_RS08480 71191b943b12706eae64156c302a7060 296 SUPERFAMILY SSF52335 156 273 8.01E-29 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PNUC_RS07485 ea80586ff244b1591303b706371f143c 292 PIRSF PIRSF009120 1 250 1.3E-107 T 22-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 PNUC_RS07485 ea80586ff244b1591303b706371f143c 292 SUPERFAMILY SSF56235 2 240 4.94E-32 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS07485 ea80586ff244b1591303b706371f143c 292 Gene3D G3DSA:3.60.20.10 2 212 3.7E-13 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 PANTHER PTHR22912 1 345 2.0E-104 T 22-04-2016 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 287 5.2E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 3.5E-14 T 22-04-2016 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 389 3.5E-14 T 22-04-2016 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 3.5E-14 T 22-04-2016 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 3.5E-14 T 22-04-2016 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 3.5E-14 T 22-04-2016 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.7E-20 T 22-04-2016 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 1.7E-20 T 22-04-2016 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.7E-20 T 22-04-2016 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.7E-20 T 22-04-2016 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.7E-20 T 22-04-2016 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 SUPERFAMILY SSF51905 12 311 2.23E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 PANTHER PTHR22912:SF130 1 345 2.0E-104 T 22-04-2016 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 Gene3D G3DSA:3.50.50.60 10 110 1.7E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS07220 8c53be5ed7481528faead4d1388059da 389 Gene3D G3DSA:3.50.50.60 111 305 5.0E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS05950 12fe979ae6d75780b2a14766d4addfbb 490 PANTHER PTHR30195:SF2 105 376 3.7E-49 T 22-04-2016 PNUC_RS05950 12fe979ae6d75780b2a14766d4addfbb 490 PANTHER PTHR30195 105 376 3.7E-49 T 22-04-2016 PNUC_RS05950 12fe979ae6d75780b2a14766d4addfbb 490 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 272 278 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PNUC_RS05950 12fe979ae6d75780b2a14766d4addfbb 490 Pfam PF02384 N-6 DNA Methylase 140 453 3.7E-83 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 PNUC_RS05950 12fe979ae6d75780b2a14766d4addfbb 490 Pfam PF12161 HsdM N-terminal domain 4 129 1.1E-18 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain PNUC_RS05950 12fe979ae6d75780b2a14766d4addfbb 490 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 298 322 7.0E-23 T 22-04-2016 PNUC_RS05950 12fe979ae6d75780b2a14766d4addfbb 490 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 162 178 7.0E-23 T 22-04-2016 PNUC_RS05950 12fe979ae6d75780b2a14766d4addfbb 490 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 200 7.0E-23 T 22-04-2016 PNUC_RS05950 12fe979ae6d75780b2a14766d4addfbb 490 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 269 281 7.0E-23 T 22-04-2016 PNUC_RS05950 12fe979ae6d75780b2a14766d4addfbb 490 SUPERFAMILY SSF53335 3 482 1.11E-122 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS05950 12fe979ae6d75780b2a14766d4addfbb 490 Gene3D G3DSA:3.40.50.150 164 398 1.2E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS04885 38ee69cb079ef596c75033442090d600 487 SUPERFAMILY SSF109998 198 242 1.88E-18 T 22-04-2016 IPR027304 Trigger factor/SurA domain PNUC_RS04885 38ee69cb079ef596c75033442090d600 487 SUPERFAMILY SSF109998 42 164 1.88E-18 T 22-04-2016 IPR027304 Trigger factor/SurA domain PNUC_RS04885 38ee69cb079ef596c75033442090d600 487 Pfam PF13624 SurA N-terminal domain 1 160 7.1E-29 T 22-04-2016 PNUC_RS04885 38ee69cb079ef596c75033442090d600 487 PANTHER PTHR10657:SF13 198 236 2.7E-13 T 22-04-2016 PNUC_RS04885 38ee69cb079ef596c75033442090d600 487 PANTHER PTHR10657:SF13 1 170 2.7E-13 T 22-04-2016 PNUC_RS04885 38ee69cb079ef596c75033442090d600 487 PANTHER PTHR10657 198 236 2.7E-13 T 22-04-2016 PNUC_RS04885 38ee69cb079ef596c75033442090d600 487 PANTHER PTHR10657 1 170 2.7E-13 T 22-04-2016 PNUC_RS04885 38ee69cb079ef596c75033442090d600 487 Pfam PF13145 PPIC-type PPIASE domain 204 343 7.0E-8 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PNUC_RS03615 aec70276e8f234af2e68aa400dcee64e 140 SUPERFAMILY SSF88723 1 131 3.92E-15 T 22-04-2016 IPR029060 PIN domain-like PNUC_RS03615 aec70276e8f234af2e68aa400dcee64e 140 Gene3D G3DSA:3.40.50.1010 1 139 6.4E-15 T 22-04-2016 IPR029060 PIN domain-like PNUC_RS03615 aec70276e8f234af2e68aa400dcee64e 140 Pfam PF01850 PIN domain 2 128 3.0E-12 T 22-04-2016 IPR002716 PIN domain PNUC_RS09135 2459674b1d97d31722c47cf6f4185db6 280 Pfam PF13371 Tetratricopeptide repeat 199 270 3.3E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09135 2459674b1d97d31722c47cf6f4185db6 280 PANTHER PTHR31350 14 276 2.7E-36 T 22-04-2016 PNUC_RS09135 2459674b1d97d31722c47cf6f4185db6 280 Pfam PF13369 Transglutaminase-like superfamily 41 197 8.6E-44 T 22-04-2016 IPR032698 Protein SirB1, N-terminal PNUC_RS09135 2459674b1d97d31722c47cf6f4185db6 280 PANTHER PTHR31350:SF1 14 276 2.7E-36 T 22-04-2016 PNUC_RS03090 acb76315285f3259ab7d36f97b2d2f9e 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 320 3.5E-31 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PNUC_RS03090 acb76315285f3259ab7d36f97b2d2f9e 326 Gene3D G3DSA:3.40.50.720 118 291 3.3E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03090 acb76315285f3259ab7d36f97b2d2f9e 326 SUPERFAMILY SSF52283 3 137 3.4E-37 T 22-04-2016 PNUC_RS03090 acb76315285f3259ab7d36f97b2d2f9e 326 SUPERFAMILY SSF51735 104 289 1.27E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03090 acb76315285f3259ab7d36f97b2d2f9e 326 Gene3D G3DSA:3.40.50.720 3 117 2.4E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS03090 acb76315285f3259ab7d36f97b2d2f9e 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 228 244 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PNUC_RS03090 acb76315285f3259ab7d36f97b2d2f9e 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 288 2.2E-59 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PNUC_RS03090 acb76315285f3259ab7d36f97b2d2f9e 326 PANTHER PTHR10996 1 324 4.2E-124 T 22-04-2016 PNUC_RS09605 fc2ab1fa898c7a90afea350aee99a993 209 PANTHER PTHR30506 1 209 5.1E-48 T 22-04-2016 PNUC_RS09605 fc2ab1fa898c7a90afea350aee99a993 209 Pfam PF03458 UPF0126 domain 7 79 5.6E-20 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 PNUC_RS09605 fc2ab1fa898c7a90afea350aee99a993 209 Pfam PF03458 UPF0126 domain 94 167 4.5E-17 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 PNUC_RS08560 ac8b66de5b8be78abdf5bca0b704109c 200 PANTHER PTHR23026:SF111 1 200 4.7E-52 T 22-04-2016 PNUC_RS08560 ac8b66de5b8be78abdf5bca0b704109c 200 PANTHER PTHR23026 1 200 4.7E-52 T 22-04-2016 PNUC_RS08560 ac8b66de5b8be78abdf5bca0b704109c 200 SUPERFAMILY SSF55469 1 186 2.88E-50 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PNUC_RS08560 ac8b66de5b8be78abdf5bca0b704109c 200 Gene3D G3DSA:3.40.109.10 1 195 1.6E-53 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PNUC_RS08560 ac8b66de5b8be78abdf5bca0b704109c 200 Pfam PF00881 Nitroreductase family 7 177 6.8E-34 T 22-04-2016 IPR029479 Nitroreductase PNUC_RS10185 8ae4976bf00b2f9a0ea466d815235c36 364 Pfam PF04892 VanZ like family 35 140 4.3E-13 T 22-04-2016 IPR006976 VanZ-like PNUC_RS09490 44d0cd3ba721dc563bb7c095a2bca140 236 Pfam PF03741 Integral membrane protein TerC family 17 191 3.9E-44 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 PNUC_RS09490 44d0cd3ba721dc563bb7c095a2bca140 236 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 14 192 5.5E-66 T 22-04-2016 IPR022301 Integral membrane protein YjbE PNUC_RS09490 44d0cd3ba721dc563bb7c095a2bca140 236 PANTHER PTHR30060 4 209 8.0E-34 T 22-04-2016 PNUC_RS07745 a1741282c77ed07cba4921b1045a8612 242 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 45 238 1.6E-78 T 22-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 PNUC_RS07745 a1741282c77ed07cba4921b1045a8612 242 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 42 213 9.1E-39 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 PNUC_RS07745 a1741282c77ed07cba4921b1045a8612 242 PANTHER PTHR23293 33 239 5.4E-64 T 22-04-2016 PNUC_RS07745 a1741282c77ed07cba4921b1045a8612 242 SUPERFAMILY SSF52402 19 202 2.55E-43 T 22-04-2016 PNUC_RS07745 a1741282c77ed07cba4921b1045a8612 242 Gene3D G3DSA:3.40.50.620 14 210 1.4E-50 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PNUC_RS07745 a1741282c77ed07cba4921b1045a8612 242 PANTHER PTHR23293:SF12 33 239 5.4E-64 T 22-04-2016 PNUC_RS07745 a1741282c77ed07cba4921b1045a8612 242 PIRSF PIRSF000857 8 242 2.1E-74 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 PNUC_RS06405 24bc7d9a5c3abd032fd676d9ceb2283b 870 PANTHER PTHR34595:SF1 30 868 1.3E-222 T 22-04-2016 PNUC_RS06405 24bc7d9a5c3abd032fd676d9ceb2283b 870 SUPERFAMILY SSF56059 72 237 6.0E-17 T 22-04-2016 PNUC_RS06405 24bc7d9a5c3abd032fd676d9ceb2283b 870 SUPERFAMILY SSF56059 343 469 6.0E-17 T 22-04-2016 PNUC_RS06405 24bc7d9a5c3abd032fd676d9ceb2283b 870 Pfam PF14403 Circularly permuted ATP-grasp type 2 99 486 2.5E-146 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 PNUC_RS06405 24bc7d9a5c3abd032fd676d9ceb2283b 870 PANTHER PTHR34595 30 868 1.3E-222 T 22-04-2016 PNUC_RS06405 24bc7d9a5c3abd032fd676d9ceb2283b 870 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 536 858 3.7E-65 T 22-04-2016 IPR007296 Domain of unknown function DUF403 PNUC_RS04535 a0b5156b935f5ebe5ed4f71afcc34be6 397 PANTHER PTHR24023 52 381 8.2E-29 T 22-04-2016 PNUC_RS04535 a0b5156b935f5ebe5ed4f71afcc34be6 397 Pfam PF02515 CoA-transferase family III 6 371 2.0E-119 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 PNUC_RS04535 a0b5156b935f5ebe5ed4f71afcc34be6 397 SUPERFAMILY SSF89796 1 393 1.44E-126 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS04535 a0b5156b935f5ebe5ed4f71afcc34be6 397 Gene3D G3DSA:3.40.50.10540 2 214 1.8E-105 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS04535 a0b5156b935f5ebe5ed4f71afcc34be6 397 Gene3D G3DSA:3.40.50.10540 304 394 1.8E-105 T 22-04-2016 IPR023606 CoA-transferase family III domain PNUC_RS04535 a0b5156b935f5ebe5ed4f71afcc34be6 397 PANTHER PTHR24023:SF593 52 381 8.2E-29 T 22-04-2016 PNUC_RS04535 a0b5156b935f5ebe5ed4f71afcc34be6 397 Gene3D G3DSA:3.30.1540.10 221 303 3.3E-22 T 22-04-2016 PNUC_RS03320 b7163dc089c8819d94251634fe53b49b 205 PANTHER PTHR24567 13 196 1.8E-14 T 22-04-2016 PNUC_RS03320 b7163dc089c8819d94251634fe53b49b 205 Gene3D G3DSA:2.60.120.10 18 167 2.4E-22 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS03320 b7163dc089c8819d94251634fe53b49b 205 Pfam PF00027 Cyclic nucleotide-binding domain 43 129 3.7E-7 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain PNUC_RS03320 b7163dc089c8819d94251634fe53b49b 205 SUPERFAMILY SSF51206 17 150 1.83E-18 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like PNUC_RS03195 90d2429f741a1570a9fe1023c040eef5 208 Pfam PF02545 Maf-like protein 6 202 5.6E-49 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 PNUC_RS03195 90d2429f741a1570a9fe1023c040eef5 208 SUPERFAMILY SSF52972 3 201 4.32E-52 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PNUC_RS03195 90d2429f741a1570a9fe1023c040eef5 208 Hamap MF_00528 Septum formation protein Maf [maf]. 5 207 26.517 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 PNUC_RS03195 90d2429f741a1570a9fe1023c040eef5 208 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 200 1.1E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 PNUC_RS03195 90d2429f741a1570a9fe1023c040eef5 208 PANTHER PTHR11746 144 200 1.1E-13 T 22-04-2016 PNUC_RS03195 90d2429f741a1570a9fe1023c040eef5 208 PIRSF PIRSF006305 2 208 2.7E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 PNUC_RS03195 90d2429f741a1570a9fe1023c040eef5 208 Gene3D G3DSA:3.90.950.10 4 204 6.0E-59 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PNUC_RS03015 a3f431077a502592dba61bce76ece4dd 545 SUPERFAMILY SSF51556 199 499 4.54E-14 T 22-04-2016 IPR032466 Metal-dependent hydrolase PNUC_RS03015 a3f431077a502592dba61bce76ece4dd 545 SUPERFAMILY SSF51556 63 112 4.54E-14 T 22-04-2016 IPR032466 Metal-dependent hydrolase PNUC_RS03015 a3f431077a502592dba61bce76ece4dd 545 Pfam PF07969 Amidohydrolase family 54 540 2.2E-64 T 22-04-2016 IPR013108 Amidohydrolase 3 PNUC_RS03015 a3f431077a502592dba61bce76ece4dd 545 SUPERFAMILY SSF51338 499 542 1.77E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS03015 a3f431077a502592dba61bce76ece4dd 545 SUPERFAMILY SSF51338 5 64 1.77E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS03015 a3f431077a502592dba61bce76ece4dd 545 Gene3D G3DSA:2.30.40.10 3 65 3.2E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS03015 a3f431077a502592dba61bce76ece4dd 545 Gene3D G3DSA:2.30.40.10 499 542 3.2E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PNUC_RS03015 a3f431077a502592dba61bce76ece4dd 545 Gene3D G3DSA:3.20.20.140 313 492 1.6E-13 T 22-04-2016 PNUC_RS03015 a3f431077a502592dba61bce76ece4dd 545 PANTHER PTHR22642 5 543 7.6E-87 T 22-04-2016 PNUC_RS03015 a3f431077a502592dba61bce76ece4dd 545 PANTHER PTHR22642:SF2 5 543 7.6E-87 T 22-04-2016 PNUC_RS03540 f08c5f283c650f581a367f8e8da4d335 158 ProSitePatterns PS00194 Thioredoxin family active site. 46 64 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PNUC_RS03540 f08c5f283c650f581a367f8e8da4d335 158 Pfam PF00578 AhpC/TSA family 30 146 3.2E-8 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PNUC_RS03540 f08c5f283c650f581a367f8e8da4d335 158 Gene3D G3DSA:3.40.30.10 20 155 9.2E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS03540 f08c5f283c650f581a367f8e8da4d335 158 SUPERFAMILY SSF52833 38 153 2.36E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS07290 0648dbb12532d20d1f17830b2af8f888 234 PANTHER PTHR30183:SF4 4 232 8.4E-79 T 22-04-2016 PNUC_RS07290 0648dbb12532d20d1f17830b2af8f888 234 SUPERFAMILY SSF161098 18 221 1.7E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS07290 0648dbb12532d20d1f17830b2af8f888 234 PANTHER PTHR30183 4 232 8.4E-79 T 22-04-2016 PNUC_RS07290 0648dbb12532d20d1f17830b2af8f888 234 Gene3D G3DSA:1.10.3720.10 16 233 6.6E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS07265 69b1a7d47e5904c2b39ef4ba06095596 167 PANTHER PTHR30353:SF12 1 148 1.3E-33 T 22-04-2016 PNUC_RS07265 69b1a7d47e5904c2b39ef4ba06095596 167 Pfam PF09335 SNARE associated Golgi protein 42 146 2.6E-8 T 22-04-2016 IPR032816 SNARE associated Golgi protein PNUC_RS07265 69b1a7d47e5904c2b39ef4ba06095596 167 PANTHER PTHR30353 1 148 1.3E-33 T 22-04-2016 IPR032818 DedA family PNUC_RS10330 0bae4e5a8aded2f54378aa74c2405e9d 395 PANTHER PTHR12049 27 370 4.0E-47 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA PNUC_RS10330 0bae4e5a8aded2f54378aa74c2405e9d 395 SUPERFAMILY SSF53335 19 381 6.06E-88 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS10330 0bae4e5a8aded2f54378aa74c2405e9d 395 Gene3D G3DSA:3.40.50.150 93 149 6.3E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS10330 0bae4e5a8aded2f54378aa74c2405e9d 395 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 81 310 7.0E-46 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA PNUC_RS08945 18f9e60f2f5e783120cc6b2fb3fc28c6 152 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 11 145 3.3E-22 T 22-04-2016 IPR009936 Protein of unknown function DUF1468 PNUC_RS06200 76abadd064deef222c9e3f6a89c92b40 433 SUPERFAMILY SSF75304 6 431 1.02E-107 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS06200 76abadd064deef222c9e3f6a89c92b40 433 Pfam PF01425 Amidase 28 421 4.4E-77 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS06200 76abadd064deef222c9e3f6a89c92b40 433 PANTHER PTHR11895 12 425 7.1E-102 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS06200 76abadd064deef222c9e3f6a89c92b40 433 Gene3D G3DSA:3.90.1300.10 8 431 2.5E-107 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PNUC_RS02070 718d90e1aa6b01fc720f2054ba5cc369 191 PANTHER PTHR38099 76 191 8.6E-16 T 22-04-2016 PNUC_RS02070 718d90e1aa6b01fc720f2054ba5cc369 191 Pfam PF02620 Uncharacterized ACR, COG1399 78 189 6.4E-18 T 22-04-2016 IPR003772 Protein of unknown function DUF177 PNUC_RS06140 ccda0aa6aa59e423409300e0446de92e 514 Pfam PF11658 Cellulose biosynthesis protein BcsG 4 507 1.9E-187 T 22-04-2016 IPR017744 Cellulose biosynthesis protein BcsG PNUC_RS06140 ccda0aa6aa59e423409300e0446de92e 514 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 2 508 2.4E-168 T 22-04-2016 IPR017744 Cellulose biosynthesis protein BcsG PNUC_RS04495 848490fafb88ca0c6434085bf735f500 435 Pfam PF07804 HipA-like C-terminal domain 256 400 4.0E-29 T 22-04-2016 IPR012893 HipA-like, C-terminal PNUC_RS04495 848490fafb88ca0c6434085bf735f500 435 Pfam PF13657 HipA N-terminal domain 20 126 1.1E-4 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 PNUC_RS04495 848490fafb88ca0c6434085bf735f500 435 Pfam PF07805 HipA-like N-terminal domain 174 244 3.0E-12 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 PNUC_RS04495 848490fafb88ca0c6434085bf735f500 435 PANTHER PTHR37419 83 344 1.1E-31 T 22-04-2016 PNUC_RS04495 848490fafb88ca0c6434085bf735f500 435 PANTHER PTHR37419:SF2 83 344 1.1E-31 T 22-04-2016 PNUC_RS07360 5db88b64c1481a2e4659531c49e7f531 215 Pfam PF01865 Protein of unknown function DUF47 19 213 1.4E-23 T 22-04-2016 IPR018445 Putative phosphate transport regulator PNUC_RS07360 5db88b64c1481a2e4659531c49e7f531 215 SUPERFAMILY SSF109755 23 208 1.96E-5 T 22-04-2016 PNUC_RS07360 5db88b64c1481a2e4659531c49e7f531 215 PANTHER PTHR37298 1 215 1.8E-47 T 22-04-2016 PNUC_RS07360 5db88b64c1481a2e4659531c49e7f531 215 Gene3D G3DSA:1.20.58.220 109 207 1.3E-5 T 22-04-2016 PNUC_RS02695 cf4e17941fd6ba0e6d90416ebb63d9f2 81 Pfam PF00886 Ribosomal protein S16 8 68 3.0E-22 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02695 cf4e17941fd6ba0e6d90416ebb63d9f2 81 SUPERFAMILY SSF54565 1 76 3.01E-26 T 22-04-2016 IPR023803 Ribosomal protein S16 domain PNUC_RS02695 cf4e17941fd6ba0e6d90416ebb63d9f2 81 Gene3D G3DSA:3.30.1320.10 1 77 1.6E-29 T 22-04-2016 IPR023803 Ribosomal protein S16 domain PNUC_RS02695 cf4e17941fd6ba0e6d90416ebb63d9f2 81 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 21.019 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02695 cf4e17941fd6ba0e6d90416ebb63d9f2 81 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 77 1.6E-23 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS02695 cf4e17941fd6ba0e6d90416ebb63d9f2 81 PANTHER PTHR12919 1 76 5.0E-30 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 18 208 45.399 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 Gene3D G3DSA:3.90.226.10 18 207 1.8E-90 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 105 116 - T 22-04-2016 IPR018215 ClpP, Ser active site PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 127 140 - T 22-04-2016 IPR033135 ClpP, histidine active site PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 Pfam PF00574 Clp protease 28 207 9.8E-90 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 PANTHER PTHR10381 18 209 1.8E-135 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 PRINTS PR00127 Clp protease catalytic subunit P signature 105 122 2.7E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 PRINTS PR00127 Clp protease catalytic subunit P signature 34 49 2.7E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 PRINTS PR00127 Clp protease catalytic subunit P signature 183 202 2.7E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 PRINTS PR00127 Clp protease catalytic subunit P signature 126 145 2.7E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 PRINTS PR00127 Clp protease catalytic subunit P signature 74 94 2.7E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 17 207 3.5E-106 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PNUC_RS04865 8482876de0a723759e32021ec90e9865 209 SUPERFAMILY SSF52096 27 207 7.63E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS00985 59150a53956ad1172ed7b963653e59ce 207 SUPERFAMILY SSF52540 3 198 8.55E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00985 59150a53956ad1172ed7b963653e59ce 207 PANTHER PTHR10695 2 198 3.0E-66 T 22-04-2016 PNUC_RS00985 59150a53956ad1172ed7b963653e59ce 207 Pfam PF01121 Dephospho-CoA kinase 3 181 4.9E-59 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 PNUC_RS00985 59150a53956ad1172ed7b963653e59ce 207 Gene3D G3DSA:3.40.50.300 2 198 2.9E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS00985 59150a53956ad1172ed7b963653e59ce 207 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 193 3.0E-53 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 PNUC_RS00985 59150a53956ad1172ed7b963653e59ce 207 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 199 28.303 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 PNUC_RS01335 67be8d8866d434e6d7c8cb893d948157 255 Pfam PF10111 Glycosyltransferase like family 2 127 182 5.0E-7 T 22-04-2016 IPR019290 Glycosyltransferase 2-like, prokaryotic type PNUC_RS01335 67be8d8866d434e6d7c8cb893d948157 255 Gene3D G3DSA:3.90.550.10 10 182 1.1E-4 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS01335 67be8d8866d434e6d7c8cb893d948157 255 SUPERFAMILY SSF53448 9 172 1.04E-11 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS02785 28a5bc90f2d6fbff32dec57c2307e04f 102 Pfam PF04341 Protein of unknown function, DUF485 11 97 3.1E-36 T 22-04-2016 IPR007436 Protein of unknown function DUF485 PNUC_RS02785 28a5bc90f2d6fbff32dec57c2307e04f 102 PANTHER PTHR38598 2 100 8.2E-43 T 22-04-2016 PNUC_RS01935 d5a3c0bd586d09e5d765f15213fa2d23 184 SUPERFAMILY SSF50814 11 183 6.23E-43 T 22-04-2016 IPR011038 Calycin-like PNUC_RS01935 d5a3c0bd586d09e5d765f15213fa2d23 184 PIRSF PIRSF036893 1 184 1.3E-53 T 22-04-2016 IPR022271 Lipocalin, ApoD type PNUC_RS01935 d5a3c0bd586d09e5d765f15213fa2d23 184 PRINTS PR01171 Bacterial lipocalin signature 71 80 9.7E-8 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 PNUC_RS01935 d5a3c0bd586d09e5d765f15213fa2d23 184 PRINTS PR01171 Bacterial lipocalin signature 34 48 9.7E-8 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 PNUC_RS01935 d5a3c0bd586d09e5d765f15213fa2d23 184 PRINTS PR01171 Bacterial lipocalin signature 143 154 9.7E-8 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 PNUC_RS01935 d5a3c0bd586d09e5d765f15213fa2d23 184 Pfam PF08212 Lipocalin-like domain 34 181 6.7E-46 T 22-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain PNUC_RS01935 d5a3c0bd586d09e5d765f15213fa2d23 184 PANTHER PTHR10612 19 183 1.7E-42 T 22-04-2016 PNUC_RS01935 d5a3c0bd586d09e5d765f15213fa2d23 184 Gene3D G3DSA:2.40.128.20 6 183 1.7E-50 T 22-04-2016 IPR012674 Calycin PNUC_RS03170 604cae1618b2b3477d9390c09e814e52 386 SUPERFAMILY SSF53756 10 385 3.08E-69 T 22-04-2016 PNUC_RS03170 604cae1618b2b3477d9390c09e814e52 386 Gene3D G3DSA:3.40.50.2000 10 140 9.0E-19 T 22-04-2016 PNUC_RS03170 604cae1618b2b3477d9390c09e814e52 386 PANTHER PTHR30160 9 383 4.5E-44 T 22-04-2016 PNUC_RS03170 604cae1618b2b3477d9390c09e814e52 386 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 140 318 1.1E-31 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PNUC_RS03170 604cae1618b2b3477d9390c09e814e52 386 Gene3D G3DSA:3.40.50.2000 196 385 2.6E-51 T 22-04-2016 PNUC_RS03170 604cae1618b2b3477d9390c09e814e52 386 PANTHER PTHR30160:SF1 9 383 4.5E-44 T 22-04-2016 PNUC_RS04155 9d6ca3bf9198f7759e2fd023c7af6736 269 PANTHER PTHR30269:SF14 1 266 1.4E-36 T 22-04-2016 PNUC_RS04155 9d6ca3bf9198f7759e2fd023c7af6736 269 Pfam PF01925 Sulfite exporter TauE/SafE 9 263 4.1E-43 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS04155 9d6ca3bf9198f7759e2fd023c7af6736 269 PANTHER PTHR30269 1 266 1.4E-36 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS08585 004200a707c6251b2d0c9f6ed52d0e0b 286 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 40 269 7.7E-41 T 22-04-2016 IPR018713 Domain of unknown function DUF2236 PNUC_RS08585 004200a707c6251b2d0c9f6ed52d0e0b 286 PANTHER PTHR36151:SF3 1 284 5.5E-56 T 22-04-2016 PNUC_RS08585 004200a707c6251b2d0c9f6ed52d0e0b 286 PANTHER PTHR36151 1 284 5.5E-56 T 22-04-2016 PNUC_RS10490 999fe0e97035d6e0dceb96e3b1c42bf0 300 SUPERFAMILY SSF51197 93 237 8.51E-21 T 22-04-2016 PNUC_RS10490 999fe0e97035d6e0dceb96e3b1c42bf0 300 PANTHER PTHR12366:SF25 1 245 2.9E-121 T 22-04-2016 PNUC_RS10490 999fe0e97035d6e0dceb96e3b1c42bf0 300 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 70 224 4.6E-47 T 22-04-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 PNUC_RS10490 999fe0e97035d6e0dceb96e3b1c42bf0 300 PANTHER PTHR12366 1 245 2.9E-121 T 22-04-2016 PNUC_RS10490 999fe0e97035d6e0dceb96e3b1c42bf0 300 Gene3D G3DSA:2.60.120.330 125 224 1.6E-16 T 22-04-2016 IPR027443 Isopenicillin N synthase-like PNUC_RS03675 8da839bbf6546aae3ae89a800987dda8 471 Pfam PF04966 Carbohydrate-selective porin, OprB family 122 471 4.0E-28 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PNUC_RS01330 245fb6fa91fab056dafc7e97e981c90c 314 SUPERFAMILY SSF53756 72 262 2.42E-30 T 22-04-2016 PNUC_RS01330 245fb6fa91fab056dafc7e97e981c90c 314 Pfam PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term 157 263 1.7E-7 T 22-04-2016 IPR001503 Glycosyl transferase family 10 GO:0006486|GO:0008417|GO:0016020 UniPathway: UPA00378 PNUC_RS05235 2a060d248daa54f62f0a6215c469feda 302 Pfam PF02885 Glycosyl transferase family, helical bundle domain 17 66 2.0E-11 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain PNUC_RS05235 2a060d248daa54f62f0a6215c469feda 302 SUPERFAMILY SSF52418 78 295 2.55E-32 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PNUC_RS05235 2a060d248daa54f62f0a6215c469feda 302 SUPERFAMILY SSF47648 10 71 1.96E-14 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain PNUC_RS05235 2a060d248daa54f62f0a6215c469feda 302 Gene3D G3DSA:1.20.970.10 9 69 8.5E-18 T 22-04-2016 PNUC_RS05235 2a060d248daa54f62f0a6215c469feda 302 Gene3D G3DSA:3.40.1030.10 81 299 5.2E-24 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PNUC_RS09940 3e49eada22d06eed4c9e4dc05b27801f 494 Pfam PF03550 Outer membrane lipoprotein LolB 339 491 3.2E-29 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PNUC_RS09940 3e49eada22d06eed4c9e4dc05b27801f 494 SUPERFAMILY SSF89392 328 491 2.55E-22 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX PNUC_RS09940 3e49eada22d06eed4c9e4dc05b27801f 494 Gene3D G3DSA:1.25.40.10 145 317 6.7E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS09940 3e49eada22d06eed4c9e4dc05b27801f 494 Gene3D G3DSA:2.50.20.10 327 491 2.2E-29 T 22-04-2016 PNUC_RS09940 3e49eada22d06eed4c9e4dc05b27801f 494 PANTHER PTHR23083 137 374 3.2E-17 T 22-04-2016 PNUC_RS09940 3e49eada22d06eed4c9e4dc05b27801f 494 PANTHER PTHR23083:SF412 137 374 3.2E-17 T 22-04-2016 PNUC_RS09940 3e49eada22d06eed4c9e4dc05b27801f 494 SUPERFAMILY SSF48452 153 317 1.09E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS10695 2b295cca2dfce65e4d7f4167233be624 227 SMART SM00382 41 170 3.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS10695 2b295cca2dfce65e4d7f4167233be624 227 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 45 159 2.7E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PNUC_RS10695 2b295cca2dfce65e4d7f4167233be624 227 Gene3D G3DSA:3.40.50.300 9 182 1.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS10695 2b295cca2dfce65e4d7f4167233be624 227 SUPERFAMILY SSF52540 8 216 7.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09095 df3c506dc77d8095691ea9b562b2bc10 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site PNUC_RS09095 df3c506dc77d8095691ea9b562b2bc10 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 9.4E-30 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PNUC_RS09095 df3c506dc77d8095691ea9b562b2bc10 67 PANTHER PTHR11544 1 67 1.2E-34 T 22-04-2016 PNUC_RS09095 df3c506dc77d8095691ea9b562b2bc10 67 PIRSF PIRSF002599 1 67 1.4E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 PNUC_RS09095 df3c506dc77d8095691ea9b562b2bc10 67 PRINTS PR00050 Cold shock protein signature 25 34 1.7E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PNUC_RS09095 df3c506dc77d8095691ea9b562b2bc10 67 PRINTS PR00050 Cold shock protein signature 40 58 1.7E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PNUC_RS09095 df3c506dc77d8095691ea9b562b2bc10 67 PRINTS PR00050 Cold shock protein signature 4 19 1.7E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PNUC_RS09095 df3c506dc77d8095691ea9b562b2bc10 67 Gene3D G3DSA:2.40.50.140 1 65 1.1E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS09095 df3c506dc77d8095691ea9b562b2bc10 67 SMART SM00357 3 67 4.1E-28 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 PNUC_RS09095 df3c506dc77d8095691ea9b562b2bc10 67 SUPERFAMILY SSF50249 1 65 9.64E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PNUC_RS07770 7d1dee22f43c0f8b72bcd7cfb6851012 103 Gene3D G3DSA:1.10.760.10 38 79 1.2E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS07770 7d1dee22f43c0f8b72bcd7cfb6851012 103 SUPERFAMILY SSF46626 37 101 5.47E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS05260 8d62e1939ac42307f02c328ccb2880af 199 PIRSF PIRSF000232 13 198 7.9E-46 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- PNUC_RS05260 8d62e1939ac42307f02c328ccb2880af 199 PANTHER PTHR23026:SF107 26 179 8.3E-26 T 22-04-2016 PNUC_RS05260 8d62e1939ac42307f02c328ccb2880af 199 SUPERFAMILY SSF55469 22 196 3.01E-26 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PNUC_RS05260 8d62e1939ac42307f02c328ccb2880af 199 PANTHER PTHR23026 26 179 8.3E-26 T 22-04-2016 PNUC_RS05260 8d62e1939ac42307f02c328ccb2880af 199 Pfam PF00881 Nitroreductase family 41 178 1.2E-20 T 22-04-2016 IPR029479 Nitroreductase PNUC_RS05260 8d62e1939ac42307f02c328ccb2880af 199 Gene3D G3DSA:3.40.109.10 41 193 6.8E-28 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PNUC_RS05750 ade18da06a5a979ef30ef551f22922ea 244 PANTHER PTHR22726 58 229 6.2E-15 T 22-04-2016 PNUC_RS05750 ade18da06a5a979ef30ef551f22922ea 244 Gene3D G3DSA:3.30.2010.10 51 123 1.5E-9 T 22-04-2016 PNUC_RS05750 ade18da06a5a979ef30ef551f22922ea 244 Pfam PF01435 Peptidase family M48 69 229 2.4E-17 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PNUC_RS09265 af0982693eba97b55d4dd7ed675a456d 241 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 78 92 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 PNUC_RS09265 af0982693eba97b55d4dd7ed675a456d 241 PANTHER PTHR10146 4 237 3.9E-95 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 PNUC_RS09265 af0982693eba97b55d4dd7ed675a456d 241 Pfam PF01168 Alanine racemase, N-terminal domain 20 236 7.6E-27 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PNUC_RS09265 af0982693eba97b55d4dd7ed675a456d 241 SUPERFAMILY SSF51419 2 234 1.57E-77 T 22-04-2016 IPR029066 PLP-binding barrel PNUC_RS09265 af0982693eba97b55d4dd7ed675a456d 241 Gene3D G3DSA:3.20.20.10 1 237 9.1E-91 T 22-04-2016 IPR029066 PLP-binding barrel PNUC_RS09265 af0982693eba97b55d4dd7ed675a456d 241 PIRSF PIRSF004848 1 240 1.0E-75 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 PNUC_RS09265 af0982693eba97b55d4dd7ed675a456d 241 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 236 5.4E-80 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 PNUC_RS09380 1aaec2b93020094b477a6f565a936952 280 Gene3D G3DSA:3.20.20.450 87 256 3.6E-4 T 22-04-2016 IPR001633 EAL domain PNUC_RS09380 1aaec2b93020094b477a6f565a936952 280 SUPERFAMILY SSF141868 82 257 3.4E-6 T 22-04-2016 IPR001633 EAL domain PNUC_RS00940 8ea8dd73dbe1817f33fb8bf896f2f790 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 1.8E-106 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PNUC_RS00940 8ea8dd73dbe1817f33fb8bf896f2f790 304 PANTHER PTHR33694:SF1 1 304 5.4E-123 T 22-04-2016 PNUC_RS00940 8ea8dd73dbe1817f33fb8bf896f2f790 304 Gene3D G3DSA:3.30.230.20 2 125 9.0E-44 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PNUC_RS00940 8ea8dd73dbe1817f33fb8bf896f2f790 304 PANTHER PTHR33694 1 304 5.4E-123 T 22-04-2016 PNUC_RS00940 8ea8dd73dbe1817f33fb8bf896f2f790 304 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 48.102 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PNUC_RS00940 8ea8dd73dbe1817f33fb8bf896f2f790 304 Gene3D G3DSA:3.30.1700.10 128 282 9.9E-60 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PNUC_RS00940 8ea8dd73dbe1817f33fb8bf896f2f790 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 289 6.6E-115 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PNUC_RS00940 8ea8dd73dbe1817f33fb8bf896f2f790 304 SUPERFAMILY SSF54211 2 125 1.97E-39 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS00940 8ea8dd73dbe1817f33fb8bf896f2f790 304 SUPERFAMILY SSF54211 133 278 1.52E-51 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PNUC_RS07730 4aefbf67b6c994b10384425df2050b0b 159 SUPERFAMILY SSF158442 6 154 1.03E-28 T 22-04-2016 PNUC_RS07730 4aefbf67b6c994b10384425df2050b0b 159 Gene3D G3DSA:1.20.1550.10 3 158 1.2E-39 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain PNUC_RS07730 4aefbf67b6c994b10384425df2050b0b 159 Pfam PF02600 Disulfide bond formation protein DsbB 4 152 1.1E-33 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 PNUC_RS08065 818034584ae5f8aeff0710c4525d823f 279 SMART SM01007 47 229 1.9E-46 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal PNUC_RS08065 818034584ae5f8aeff0710c4525d823f 279 SUPERFAMILY SSF53639 40 262 2.55E-51 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal PNUC_RS08065 818034584ae5f8aeff0710c4525d823f 279 PANTHER PTHR10672 25 278 6.1E-85 T 22-04-2016 PNUC_RS08065 818034584ae5f8aeff0710c4525d823f 279 PANTHER PTHR10672:SF17 25 278 6.1E-85 T 22-04-2016 PNUC_RS08065 818034584ae5f8aeff0710c4525d823f 279 Gene3D G3DSA:3.40.225.10 41 257 1.2E-52 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal PNUC_RS08065 818034584ae5f8aeff0710c4525d823f 279 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 48 228 2.0E-38 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal PNUC_RS09335 856f78bcdbf048b311e00b32add3d1b7 112 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 15 101 2.1E-38 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 PNUC_RS09335 856f78bcdbf048b311e00b32add3d1b7 112 PANTHER PTHR10160 13 101 6.2E-42 T 22-04-2016 PNUC_RS01790 6a42e174c61796542bb93b0150c8f148 124 SUPERFAMILY SSF46785 40 116 1.39E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS01790 6a42e174c61796542bb93b0150c8f148 124 Gene3D G3DSA:1.10.10.10 39 118 3.1E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS09435 f9747c95dfd182210d2c6b7b95505680 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 PNUC_RS09435 f9747c95dfd182210d2c6b7b95505680 307 Pfam PF01063 Amino-transferase class IV 36 266 2.0E-54 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PNUC_RS09435 f9747c95dfd182210d2c6b7b95505680 307 PANTHER PTHR11825 1 305 8.6E-119 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PNUC_RS09435 f9747c95dfd182210d2c6b7b95505680 307 PANTHER PTHR11825:SF7 1 305 8.6E-119 T 22-04-2016 PNUC_RS09435 f9747c95dfd182210d2c6b7b95505680 307 Gene3D G3DSA:3.20.10.10 135 295 1.4E-60 T 22-04-2016 PNUC_RS09435 f9747c95dfd182210d2c6b7b95505680 307 Gene3D G3DSA:3.30.470.10 8 130 2.3E-37 T 22-04-2016 PNUC_RS09435 f9747c95dfd182210d2c6b7b95505680 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 5.2E-133 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 PNUC_RS09435 f9747c95dfd182210d2c6b7b95505680 307 SUPERFAMILY SSF56752 1 303 2.88E-103 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PNUC_RS05060 182625e0b4267a3adf4c4b3db9ab9947 285 PANTHER PTHR17985 2 261 1.7E-76 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 PNUC_RS05060 182625e0b4267a3adf4c4b3db9ab9947 285 PANTHER PTHR17985:SF8 2 261 1.7E-76 T 22-04-2016 PNUC_RS05060 182625e0b4267a3adf4c4b3db9ab9947 285 Pfam PF05742 Transport and Golgi organisation 2 1 261 1.4E-68 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 PNUC_RS02315 08fa7d4e4ec0af89b32426228ddd3bfe 85 PANTHER PTHR33359 1 85 9.2E-20 T 22-04-2016 PNUC_RS02315 08fa7d4e4ec0af89b32426228ddd3bfe 85 Pfam PF02597 ThiS family 6 85 2.5E-16 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 PNUC_RS02315 08fa7d4e4ec0af89b32426228ddd3bfe 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 4 85 1.0E-22 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 PNUC_RS02315 08fa7d4e4ec0af89b32426228ddd3bfe 85 Gene3D G3DSA:3.10.20.30 1 85 1.2E-24 T 22-04-2016 IPR012675 Beta-grasp domain PNUC_RS02315 08fa7d4e4ec0af89b32426228ddd3bfe 85 SUPERFAMILY SSF54285 1 83 7.48E-21 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PNUC_RS02260 684ed81366cfd09a6fba98e33893b409 305 Pfam PF01522 Polysaccharide deacetylase 15 170 6.7E-8 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PNUC_RS02260 684ed81366cfd09a6fba98e33893b409 305 Gene3D G3DSA:3.20.20.370 14 38 4.1E-28 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PNUC_RS02260 684ed81366cfd09a6fba98e33893b409 305 Gene3D G3DSA:3.20.20.370 86 278 4.1E-28 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PNUC_RS02260 684ed81366cfd09a6fba98e33893b409 305 SUPERFAMILY SSF88713 86 277 3.06E-26 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PNUC_RS02260 684ed81366cfd09a6fba98e33893b409 305 SUPERFAMILY SSF88713 15 41 3.06E-26 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PNUC_RS00795 5c412446d203a0db9e6d299f090f9d05 341 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 37.468 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 PNUC_RS00795 5c412446d203a0db9e6d299f090f9d05 341 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 336 9.1E-128 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 PNUC_RS00795 5c412446d203a0db9e6d299f090f9d05 341 Gene3D G3DSA:3.40.1030.10 77 339 1.2E-108 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PNUC_RS00795 5c412446d203a0db9e6d299f090f9d05 341 PANTHER PTHR11922:SF5 1 341 5.2E-116 T 22-04-2016 PNUC_RS00795 5c412446d203a0db9e6d299f090f9d05 341 PANTHER PTHR11922 1 341 5.2E-116 T 22-04-2016 PNUC_RS00795 5c412446d203a0db9e6d299f090f9d05 341 SUPERFAMILY SSF47648 4 71 1.22E-16 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain PNUC_RS00795 5c412446d203a0db9e6d299f090f9d05 341 SUPERFAMILY SSF52418 77 340 1.96E-99 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PNUC_RS00795 5c412446d203a0db9e6d299f090f9d05 341 Gene3D G3DSA:1.20.970.10 6 71 2.3E-26 T 22-04-2016 PNUC_RS00795 5c412446d203a0db9e6d299f090f9d05 341 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 1.3E-13 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain PNUC_RS00795 5c412446d203a0db9e6d299f090f9d05 341 Pfam PF00591 Glycosyl transferase family, a/b domain 78 327 1.7E-95 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PNUC_RS05790 8917524738f977009a6d350461908525 113 PANTHER PTHR33988 2 113 8.9E-40 T 22-04-2016 PNUC_RS05790 8917524738f977009a6d350461908525 113 Gene3D G3DSA:2.30.30.110 5 110 2.9E-32 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor PNUC_RS05790 8917524738f977009a6d350461908525 113 SUPERFAMILY SSF50118 4 110 8.5E-30 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor PNUC_RS05790 8917524738f977009a6d350461908525 113 PANTHER PTHR33988:SF3 2 113 8.9E-40 T 22-04-2016 PNUC_RS05790 8917524738f977009a6d350461908525 113 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 9 108 2.8E-21 T 22-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 PNUC_RS03440 cdca9bed71576f93679173a025cbed35 285 Pfam PF01810 LysE type translocator 87 284 8.4E-34 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PNUC_RS03440 cdca9bed71576f93679173a025cbed35 285 PANTHER PTHR30086:SF15 73 284 2.8E-50 T 22-04-2016 PNUC_RS03440 cdca9bed71576f93679173a025cbed35 285 PANTHER PTHR30086 73 284 2.8E-50 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PNUC_RS02630 bbdd9ab2c54e4f3a4aaba4e7da996010 309 PANTHER PTHR10584:SF159 1 309 1.1E-121 T 22-04-2016 PNUC_RS02630 bbdd9ab2c54e4f3a4aaba4e7da996010 309 Gene3D G3DSA:3.40.1190.20 13 308 2.4E-68 T 22-04-2016 IPR029056 Ribokinase-like PNUC_RS02630 bbdd9ab2c54e4f3a4aaba4e7da996010 309 Pfam PF00294 pfkB family carbohydrate kinase 12 302 7.2E-50 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB PNUC_RS02630 bbdd9ab2c54e4f3a4aaba4e7da996010 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 52 75 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PNUC_RS02630 bbdd9ab2c54e4f3a4aaba4e7da996010 309 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 309 2.0E-124 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 PNUC_RS02630 bbdd9ab2c54e4f3a4aaba4e7da996010 309 SUPERFAMILY SSF53613 12 308 1.03E-60 T 22-04-2016 IPR029056 Ribokinase-like PNUC_RS02630 bbdd9ab2c54e4f3a4aaba4e7da996010 309 PANTHER PTHR10584 1 309 1.1E-121 T 22-04-2016 PNUC_RS04110 c135b1b5ed5b5e3aa7e94dec5dfee97f 163 Pfam PF04143 Sulphur transport 20 157 1.6E-13 T 22-04-2016 IPR007272 Sulphur transport domain PNUC_RS04110 c135b1b5ed5b5e3aa7e94dec5dfee97f 163 PANTHER PTHR30574 1 135 3.6E-12 T 22-04-2016 PNUC_RS00725 e40ee7141a4ee490910bd198001a6461 424 Pfam PF02646 RmuC family 114 410 4.6E-106 T 22-04-2016 IPR003798 DNA recombination RmuC PNUC_RS00725 e40ee7141a4ee490910bd198001a6461 424 PANTHER PTHR30563 35 418 4.1E-105 T 22-04-2016 PNUC_RS02975 af75dad9cf3bc8302f2a958ea0bf12f8 333 Gene3D G3DSA:3.40.630.30 11 124 4.1E-10 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS02975 af75dad9cf3bc8302f2a958ea0bf12f8 333 SUPERFAMILY SSF55729 8 142 4.36E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS04175 146fef29be927e794cf048b9d804c2b1 360 PRINTS PR00606 Class ID cytochrome C signature 347 357 1.6E-18 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PNUC_RS04175 146fef29be927e794cf048b9d804c2b1 360 PRINTS PR00606 Class ID cytochrome C signature 282 295 1.6E-18 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PNUC_RS04175 146fef29be927e794cf048b9d804c2b1 360 PRINTS PR00606 Class ID cytochrome C signature 297 310 1.6E-18 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PNUC_RS04175 146fef29be927e794cf048b9d804c2b1 360 PRINTS PR00606 Class ID cytochrome C signature 320 333 1.6E-18 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PNUC_RS04175 146fef29be927e794cf048b9d804c2b1 360 PRINTS PR00606 Class ID cytochrome C signature 335 345 1.6E-18 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PNUC_RS04175 146fef29be927e794cf048b9d804c2b1 360 SUPERFAMILY SSF46626 44 182 9.46E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04175 146fef29be927e794cf048b9d804c2b1 360 Gene3D G3DSA:1.10.760.10 280 357 2.9E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04175 146fef29be927e794cf048b9d804c2b1 360 SUPERFAMILY SSF46626 282 357 2.91E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04175 146fef29be927e794cf048b9d804c2b1 360 Gene3D G3DSA:1.10.760.10 13 168 4.9E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04175 146fef29be927e794cf048b9d804c2b1 360 Pfam PF00034 Cytochrome c 66 162 7.3E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04175 146fef29be927e794cf048b9d804c2b1 360 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 280 355 2.6E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00055 7b58071581913e6603290913d297fa15 337 PANTHER PTHR21310:SF14 59 256 3.3E-18 T 22-04-2016 PNUC_RS00055 7b58071581913e6603290913d297fa15 337 PANTHER PTHR21310 59 256 3.3E-18 T 22-04-2016 PNUC_RS00055 7b58071581913e6603290913d297fa15 337 Gene3D G3DSA:3.30.200.20 4 92 1.5E-4 T 22-04-2016 PNUC_RS00055 7b58071581913e6603290913d297fa15 337 Gene3D G3DSA:3.90.1200.10 108 306 1.6E-28 T 22-04-2016 PNUC_RS00055 7b58071581913e6603290913d297fa15 337 Pfam PF01636 Phosphotransferase enzyme family 29 245 7.8E-50 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase PNUC_RS00055 7b58071581913e6603290913d297fa15 337 SUPERFAMILY SSF56112 7 320 2.25E-56 T 22-04-2016 IPR011009 Protein kinase-like domain PNUC_RS06555 5362c8184f993ceeb632423b2e1da52b 229 Pfam PF13936 Helix-turn-helix domain 2 28 5.1E-9 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain PNUC_RS06555 5362c8184f993ceeb632423b2e1da52b 229 PANTHER PTHR10948 1 208 4.8E-37 T 22-04-2016 PNUC_RS06555 5362c8184f993ceeb632423b2e1da52b 229 Gene3D G3DSA:1.10.10.60 56 95 6.5E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PNUC_RS00550 6f09775a561f8183dc12a17a24ce2dd9 252 PRINTS PR01805 VacJ lipoprotein signature 107 124 9.0E-28 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PNUC_RS00550 6f09775a561f8183dc12a17a24ce2dd9 252 PRINTS PR01805 VacJ lipoprotein signature 56 72 9.0E-28 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PNUC_RS00550 6f09775a561f8183dc12a17a24ce2dd9 252 PRINTS PR01805 VacJ lipoprotein signature 39 52 9.0E-28 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PNUC_RS00550 6f09775a561f8183dc12a17a24ce2dd9 252 PRINTS PR01805 VacJ lipoprotein signature 143 160 9.0E-28 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PNUC_RS00550 6f09775a561f8183dc12a17a24ce2dd9 252 PANTHER PTHR30035 19 242 2.3E-60 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PNUC_RS00550 6f09775a561f8183dc12a17a24ce2dd9 252 Pfam PF04333 MlaA lipoprotein 38 232 1.3E-72 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PNUC_RS00550 6f09775a561f8183dc12a17a24ce2dd9 252 PANTHER PTHR30035:SF3 19 242 2.3E-60 T 22-04-2016 PNUC_RS07330 e46741d2d464e09cbd06be2a30c83cbd 216 Gene3D G3DSA:1.10.3480.10 25 215 6.5E-39 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone PNUC_RS07330 e46741d2d464e09cbd06be2a30c83cbd 216 PANTHER PTHR34227 5 216 2.9E-36 T 22-04-2016 PNUC_RS07330 e46741d2d464e09cbd06be2a30c83cbd 216 PANTHER PTHR34227:SF4 5 216 2.9E-36 T 22-04-2016 PNUC_RS07330 e46741d2d464e09cbd06be2a30c83cbd 216 SUPERFAMILY SSF89155 24 215 4.06E-40 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone PNUC_RS07330 e46741d2d464e09cbd06be2a30c83cbd 216 Pfam PF02613 Nitrate reductase delta subunit 61 183 1.9E-24 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone PNUC_RS00185 027e8df404d858831a1aab533a21351b 216 PANTHER PTHR34606 6 194 2.4E-31 T 22-04-2016 PNUC_RS00185 027e8df404d858831a1aab533a21351b 216 Pfam PF04972 BON domain 124 186 1.3E-8 T 22-04-2016 IPR007055 BON domain PNUC_RS00185 027e8df404d858831a1aab533a21351b 216 Pfam PF04972 BON domain 49 114 7.5E-8 T 22-04-2016 IPR007055 BON domain PNUC_RS00185 027e8df404d858831a1aab533a21351b 216 PANTHER PTHR34606:SF4 6 194 2.4E-31 T 22-04-2016 PNUC_RS03080 77feeaf1021b244c1bea5cc0753a6ceb 171 PANTHER PTHR39206:SF1 1 166 2.0E-47 T 22-04-2016 PNUC_RS03080 77feeaf1021b244c1bea5cc0753a6ceb 171 SUPERFAMILY SSF52540 1 163 1.19E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS03080 77feeaf1021b244c1bea5cc0753a6ceb 171 PANTHER PTHR39206 1 166 2.0E-47 T 22-04-2016 PNUC_RS03080 77feeaf1021b244c1bea5cc0753a6ceb 171 Pfam PF13671 AAA domain 9 136 2.8E-9 T 22-04-2016 PNUC_RS03080 77feeaf1021b244c1bea5cc0753a6ceb 171 Gene3D G3DSA:3.40.50.300 6 139 3.3E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS02240 15a2d5e8060a08f08827303c30ad5cf3 177 Gene3D G3DSA:3.90.1720.10 52 175 1.9E-40 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS02240 15a2d5e8060a08f08827303c30ad5cf3 177 PANTHER PTHR21666 61 176 2.9E-32 T 22-04-2016 PNUC_RS02240 15a2d5e8060a08f08827303c30ad5cf3 177 SUPERFAMILY SSF54001 53 174 3.27E-37 T 22-04-2016 PNUC_RS02240 15a2d5e8060a08f08827303c30ad5cf3 177 Pfam PF00877 NlpC/P60 family 67 173 1.4E-28 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS04390 95913bf2ee2d4023354e1406c3eb8e6d 367 Pfam PF03969 AFG1-like ATPase 6 356 4.6E-127 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 PNUC_RS04390 95913bf2ee2d4023354e1406c3eb8e6d 367 PANTHER PTHR12169:SF11 4 360 1.6E-146 T 22-04-2016 PNUC_RS04390 95913bf2ee2d4023354e1406c3eb8e6d 367 PANTHER PTHR12169 4 360 1.6E-146 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 PNUC_RS04390 95913bf2ee2d4023354e1406c3eb8e6d 367 SUPERFAMILY SSF52540 37 178 5.03E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS04390 95913bf2ee2d4023354e1406c3eb8e6d 367 Gene3D G3DSA:3.40.50.300 13 172 2.9E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 Pfam PF03486 HI0933-like protein 6 403 1.2E-123 T 22-04-2016 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 1.9E-6 T 22-04-2016 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.9E-6 T 22-04-2016 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 PANTHER PTHR10617:SF103 341 405 3.0E-95 T 22-04-2016 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 PANTHER PTHR10617:SF103 1 297 3.0E-95 T 22-04-2016 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 PANTHER PTHR10617 341 405 3.0E-95 T 22-04-2016 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 PANTHER PTHR10617 1 297 3.0E-95 T 22-04-2016 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 Gene3D G3DSA:3.50.50.60 350 406 5.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 Gene3D G3DSA:3.50.50.60 2 187 5.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.7E-5 T 22-04-2016 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 380 1.7E-5 T 22-04-2016 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.7E-5 T 22-04-2016 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 SUPERFAMILY SSF51905 1 189 1.85E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 SUPERFAMILY SSF51905 348 405 1.85E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 Gene3D G3DSA:1.10.8.260 288 332 1.7E-6 T 22-04-2016 IPR023166 HI0933 insert-like domain PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 403 4.5E-112 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 SUPERFAMILY SSF160996 191 349 5.49E-31 T 22-04-2016 PNUC_RS07110 456c943c5d4148e4b2085cd91b645e27 409 Gene3D G3DSA:2.40.30.10 189 268 7.3E-22 T 22-04-2016 PNUC_RS05405 e5743065769f932f245b1851cafa74c8 506 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 14 490 5.2E-209 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 PNUC_RS05405 e5743065769f932f245b1851cafa74c8 506 Gene3D G3DSA:3.40.309.10 270 451 5.3E-64 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PNUC_RS05405 e5743065769f932f245b1851cafa74c8 506 PANTHER PTHR11699:SF188 11 494 5.3E-265 T 22-04-2016 PNUC_RS05405 e5743065769f932f245b1851cafa74c8 506 Gene3D G3DSA:3.40.605.10 13 269 1.4E-88 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PNUC_RS05405 e5743065769f932f245b1851cafa74c8 506 PANTHER PTHR11699 11 494 5.3E-265 T 22-04-2016 PNUC_RS05405 e5743065769f932f245b1851cafa74c8 506 SUPERFAMILY SSF53720 12 491 5.5E-150 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PNUC_RS05405 e5743065769f932f245b1851cafa74c8 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PNUC_RS05405 e5743065769f932f245b1851cafa74c8 506 Pfam PF00171 Aldehyde dehydrogenase family 28 486 1.1E-142 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PNUC_RS01080 1b989331625c61d7204ad9e8146951a8 282 PANTHER PTHR38034 7 280 5.4E-35 T 22-04-2016 PNUC_RS01080 1b989331625c61d7204ad9e8146951a8 282 Pfam PF01578 Cytochrome C assembly protein 74 278 1.4E-21 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PNUC_RS09710 e28b7b6faa7a17406204d3e8432976da 236 SUPERFAMILY SSF53448 10 236 1.32E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS09710 e28b7b6faa7a17406204d3e8432976da 236 PANTHER PTHR22572 8 236 2.0E-34 T 22-04-2016 PNUC_RS09710 e28b7b6faa7a17406204d3e8432976da 236 Gene3D G3DSA:3.90.550.10 10 236 6.5E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS09710 e28b7b6faa7a17406204d3e8432976da 236 Pfam PF00483 Nucleotidyl transferase 10 133 1.9E-16 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PNUC_RS06320 4fd22f64d78147341d678afd1e78f5a2 434 Gene3D G3DSA:3.40.50.1820 336 411 2.1E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS06320 4fd22f64d78147341d678afd1e78f5a2 434 Gene3D G3DSA:3.40.50.1820 81 236 2.1E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS06320 4fd22f64d78147341d678afd1e78f5a2 434 Gene3D G3DSA:3.40.50.1820 276 286 2.1E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS06320 4fd22f64d78147341d678afd1e78f5a2 434 Pfam PF03583 Secretory lipase 143 219 1.5E-7 T 22-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 PNUC_RS06320 4fd22f64d78147341d678afd1e78f5a2 434 Pfam PF03583 Secretory lipase 355 428 1.8E-5 T 22-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 PNUC_RS06320 4fd22f64d78147341d678afd1e78f5a2 434 PIRSF PIRSF029171 4 431 3.6E-60 T 22-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 PNUC_RS06320 4fd22f64d78147341d678afd1e78f5a2 434 SUPERFAMILY SSF53474 89 424 1.02E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS00690 6ce873b86113c8a73fbef9e70aba566f 257 Gene3D G3DSA:1.10.760.10 31 222 4.8E-62 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00690 6ce873b86113c8a73fbef9e70aba566f 257 PANTHER PTHR10266 195 257 2.4E-32 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PNUC_RS00690 6ce873b86113c8a73fbef9e70aba566f 257 PANTHER PTHR10266 47 171 2.4E-32 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PNUC_RS00690 6ce873b86113c8a73fbef9e70aba566f 257 SUPERFAMILY SSF46626 198 221 2.66E-48 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00690 6ce873b86113c8a73fbef9e70aba566f 257 SUPERFAMILY SSF46626 30 169 2.66E-48 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS00690 6ce873b86113c8a73fbef9e70aba566f 257 Gene3D G3DSA:1.20.5.100 226 257 6.7E-10 T 22-04-2016 PNUC_RS00690 6ce873b86113c8a73fbef9e70aba566f 257 Pfam PF02167 Cytochrome C1 family 45 255 1.6E-17 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PNUC_RS00690 6ce873b86113c8a73fbef9e70aba566f 257 PANTHER PTHR10266:SF3 195 257 2.4E-32 T 22-04-2016 PNUC_RS00690 6ce873b86113c8a73fbef9e70aba566f 257 PANTHER PTHR10266:SF3 47 171 2.4E-32 T 22-04-2016 PNUC_RS00975 23ada2f6d8177c100bad698efdaaaf05 138 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PNUC_RS00975 23ada2f6d8177c100bad698efdaaaf05 138 PANTHER PTHR22769 4 134 2.5E-24 T 22-04-2016 PNUC_RS00975 23ada2f6d8177c100bad698efdaaaf05 138 Gene3D G3DSA:3.90.79.10 9 135 1.2E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS00975 23ada2f6d8177c100bad698efdaaaf05 138 PANTHER PTHR22769:SF35 4 134 2.5E-24 T 22-04-2016 PNUC_RS00975 23ada2f6d8177c100bad698efdaaaf05 138 PRINTS PR00502 NUDIX hydrolase family signature 52 67 2.4E-7 T 22-04-2016 IPR020476 NUDIX hydrolase PNUC_RS00975 23ada2f6d8177c100bad698efdaaaf05 138 PRINTS PR00502 NUDIX hydrolase family signature 38 52 2.4E-7 T 22-04-2016 IPR020476 NUDIX hydrolase PNUC_RS00975 23ada2f6d8177c100bad698efdaaaf05 138 Pfam PF00293 NUDIX domain 12 117 1.7E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PNUC_RS00975 23ada2f6d8177c100bad698efdaaaf05 138 SUPERFAMILY SSF55811 7 133 2.84E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS08580 00228c3d0963a196051e08dd9b41c844 214 SMART SM00464 10 205 1.1E-6 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PNUC_RS08580 00228c3d0963a196051e08dd9b41c844 214 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 204 3.8E-20 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PNUC_RS08580 00228c3d0963a196051e08dd9b41c844 214 SUPERFAMILY SSF88697 10 204 1.57E-45 T 22-04-2016 IPR015947 PUA-like domain PNUC_RS04240 0fbb2d19dbfc2c3f0b38edfb47a4ab84 139 Gene3D G3DSA:3.10.129.10 9 138 1.3E-35 T 22-04-2016 IPR029069 HotDog domain PNUC_RS04240 0fbb2d19dbfc2c3f0b38edfb47a4ab84 139 Pfam PF13279 Thioesterase-like superfamily 20 138 2.6E-13 T 22-04-2016 PNUC_RS04240 0fbb2d19dbfc2c3f0b38edfb47a4ab84 139 PANTHER PTHR31793 2 139 4.6E-26 T 22-04-2016 PNUC_RS04240 0fbb2d19dbfc2c3f0b38edfb47a4ab84 139 SUPERFAMILY SSF54637 11 138 1.09E-30 T 22-04-2016 IPR029069 HotDog domain PNUC_RS04430 3860531488be65f4cb515e5e92fd5c24 252 SUPERFAMILY SSF51161 5 169 4.57E-52 T 22-04-2016 IPR011004 Trimeric LpxA-like PNUC_RS04430 3860531488be65f4cb515e5e92fd5c24 252 PIRSF PIRSF000441 1 241 5.3E-79 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 PNUC_RS04430 3860531488be65f4cb515e5e92fd5c24 252 Gene3D G3DSA:1.10.3130.10 1 63 2.3E-22 T 22-04-2016 PNUC_RS04430 3860531488be65f4cb515e5e92fd5c24 252 Gene3D G3DSA:2.160.10.10 64 184 1.5E-35 T 22-04-2016 PNUC_RS04430 3860531488be65f4cb515e5e92fd5c24 252 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 167 1.5E-71 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 PNUC_RS04430 3860531488be65f4cb515e5e92fd5c24 252 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 3.8E-6 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS04430 3860531488be65f4cb515e5e92fd5c24 252 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 2.9E-4 T 22-04-2016 IPR001451 Hexapeptide repeat PNUC_RS04430 3860531488be65f4cb515e5e92fd5c24 252 PANTHER PTHR23416:SF55 1 230 1.2E-88 T 22-04-2016 PNUC_RS04430 3860531488be65f4cb515e5e92fd5c24 252 PANTHER PTHR23416 1 230 1.2E-88 T 22-04-2016 PNUC_RS01780 1c8c8f987b91fae9795ccebf2736e8d3 121 SUPERFAMILY SSF53800 1 114 4.71E-27 T 22-04-2016 PNUC_RS01780 1c8c8f987b91fae9795ccebf2736e8d3 121 Gene3D G3DSA:3.40.50.1400 1 114 1.4E-29 T 22-04-2016 PNUC_RS01780 1c8c8f987b91fae9795ccebf2736e8d3 121 Pfam PF01903 CbiX 9 113 3.5E-24 T 22-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 PNUC_RS01780 1c8c8f987b91fae9795ccebf2736e8d3 121 PANTHER PTHR33542 1 114 5.4E-19 T 22-04-2016 PNUC_RS02175 ef06e7d8ae3fa78722d77171bb9f3f15 191 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 1.5E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PNUC_RS02175 ef06e7d8ae3fa78722d77171bb9f3f15 191 PIRSF PIRSF000847 1 190 3.4E-44 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 PNUC_RS02175 ef06e7d8ae3fa78722d77171bb9f3f15 191 PANTHER PTHR14269 2 186 8.2E-62 T 22-04-2016 PNUC_RS02175 ef06e7d8ae3fa78722d77171bb9f3f15 191 PANTHER PTHR14269:SF13 2 186 8.2E-62 T 22-04-2016 PNUC_RS02175 ef06e7d8ae3fa78722d77171bb9f3f15 191 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 185 8.4E-52 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 PNUC_RS02175 ef06e7d8ae3fa78722d77171bb9f3f15 191 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PNUC_RS03880 6101a0ff578235393d07ab76c6531c66 245 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 40 212 1.0E-61 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 PNUC_RS03880 6101a0ff578235393d07ab76c6531c66 245 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 43 227 5.5E-48 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 PNUC_RS03880 6101a0ff578235393d07ab76c6531c66 245 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 245 78.864 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 PNUC_RS03880 6101a0ff578235393d07ab76c6531c66 245 PANTHER PTHR30098 27 244 2.7E-51 T 22-04-2016 PNUC_RS03880 6101a0ff578235393d07ab76c6531c66 245 SUPERFAMILY SSF55729 4 238 1.62E-75 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS03895 3dc0b163dd7ad9b535e4f07dd833b12e 191 SUPERFAMILY SSF50891 23 190 1.46E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain PNUC_RS03895 3dc0b163dd7ad9b535e4f07dd833b12e 191 Gene3D G3DSA:2.40.100.10 10 190 1.7E-52 T 22-04-2016 IPR029000 Cyclophilin-like domain PNUC_RS03895 3dc0b163dd7ad9b535e4f07dd833b12e 191 PANTHER PTHR11071:SF192 21 190 1.2E-57 T 22-04-2016 PNUC_RS03895 3dc0b163dd7ad9b535e4f07dd833b12e 191 PANTHER PTHR11071 21 190 1.2E-57 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PNUC_RS03895 3dc0b163dd7ad9b535e4f07dd833b12e 191 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 26 186 1.8E-45 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PNUC_RS03895 3dc0b163dd7ad9b535e4f07dd833b12e 191 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 60 77 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PNUC_RS03895 3dc0b163dd7ad9b535e4f07dd833b12e 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 65 77 3.5E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PNUC_RS03895 3dc0b163dd7ad9b535e4f07dd833b12e 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 39 54 3.5E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PNUC_RS03895 3dc0b163dd7ad9b535e4f07dd833b12e 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 140 155 3.5E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PNUC_RS04420 ae25ae71013ef629d0fca0f88e867a97 410 PANTHER PTHR13096 27 237 2.5E-31 T 22-04-2016 PNUC_RS04420 ae25ae71013ef629d0fca0f88e867a97 410 SUPERFAMILY SSF51197 24 326 1.06E-61 T 22-04-2016 PNUC_RS04420 ae25ae71013ef629d0fca0f88e867a97 410 Gene3D G3DSA:2.60.120.650 29 239 1.7E-35 T 22-04-2016 PNUC_RS04420 ae25ae71013ef629d0fca0f88e867a97 410 Pfam PF08007 Cupin superfamily protein 33 317 4.9E-71 T 22-04-2016 IPR003347 JmjC domain PNUC_RS04670 5e82f4063db73460696926bbf9bc2e7d 277 Pfam PF15916 Domain of unknown function (DUF4743) 78 131 5.6E-6 T 22-04-2016 IPR031804 Domain of unknown function DUF4743 PNUC_RS04670 5e82f4063db73460696926bbf9bc2e7d 277 PANTHER PTHR13622:SF8 85 274 4.5E-29 T 22-04-2016 PNUC_RS04670 5e82f4063db73460696926bbf9bc2e7d 277 PANTHER PTHR13622 85 274 4.5E-29 T 22-04-2016 PNUC_RS04670 5e82f4063db73460696926bbf9bc2e7d 277 Gene3D G3DSA:3.90.79.10 100 276 4.6E-49 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS04670 5e82f4063db73460696926bbf9bc2e7d 277 SUPERFAMILY SSF55811 106 274 1.62E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS04670 5e82f4063db73460696926bbf9bc2e7d 277 Pfam PF00293 NUDIX domain 144 253 1.6E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PNUC_RS06440 7cbc855b24ce9a084decd94ee8d85be3 122 PANTHER PTHR33515 5 120 5.2E-30 T 22-04-2016 PNUC_RS06440 7cbc855b24ce9a084decd94ee8d85be3 122 Pfam PF02033 Ribosome-binding factor A 8 109 2.5E-27 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 PNUC_RS06440 7cbc855b24ce9a084decd94ee8d85be3 122 Gene3D G3DSA:3.30.300.20 5 117 4.7E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PNUC_RS06440 7cbc855b24ce9a084decd94ee8d85be3 122 SUPERFAMILY SSF89919 4 111 4.32E-29 T 22-04-2016 IPR023799 Ribosome-binding factor A domain PNUC_RS06440 7cbc855b24ce9a084decd94ee8d85be3 122 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 111 2.7E-24 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 PNUC_RS06440 7cbc855b24ce9a084decd94ee8d85be3 122 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 11 96 3.0E-34 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 PNUC_RS06440 7cbc855b24ce9a084decd94ee8d85be3 122 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 116 19.509 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 PNUC_RS05940 8b021e50181f3a0513cdb0ea1c626cc6 67 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 13 59 1.2E-6 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) PNUC_RS07565 1ec3a3ba5b8f610927c6fa5bf5bc52b8 275 Pfam PF01148 Cytidylyltransferase family 3 272 1.0E-58 T 22-04-2016 PNUC_RS07565 1ec3a3ba5b8f610927c6fa5bf5bc52b8 275 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 233 259 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 PNUC_RS07565 1ec3a3ba5b8f610927c6fa5bf5bc52b8 275 PANTHER PTHR13773 1 271 4.2E-52 T 22-04-2016 PNUC_RS07565 1ec3a3ba5b8f610927c6fa5bf5bc52b8 275 PANTHER PTHR13773:SF0 1 271 4.2E-52 T 22-04-2016 PNUC_RS05755 b531c66eb4b49b44ede6a77fd3dde8ce 220 PANTHER PTHR35024:SF2 22 153 2.5E-12 T 22-04-2016 PNUC_RS05755 b531c66eb4b49b44ede6a77fd3dde8ce 220 PANTHER PTHR35024 22 153 2.5E-12 T 22-04-2016 PNUC_RS05755 b531c66eb4b49b44ede6a77fd3dde8ce 220 Pfam PF04519 Polymer-forming cytoskeletal 22 115 1.8E-18 T 22-04-2016 IPR007607 Protein of unknown function DUF583 PNUC_RS05605 b101fbed719ea36c12de5d3a11787dda 393 Gene3D G3DSA:3.30.750.24 22 112 1.2E-4 T 22-04-2016 IPR002645 STAS domain PNUC_RS05605 b101fbed719ea36c12de5d3a11787dda 393 PANTHER PTHR30188 55 387 1.0E-69 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PNUC_RS05605 b101fbed719ea36c12de5d3a11787dda 393 SUPERFAMILY SSF52091 26 114 4.51E-5 T 22-04-2016 IPR002645 STAS domain PNUC_RS05605 b101fbed719ea36c12de5d3a11787dda 393 Pfam PF02405 Permease MlaE 178 386 5.6E-64 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PNUC_RS07415 aa4aa4a0b96b5ad88d4f1903404fd108 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PNUC_RS07415 aa4aa4a0b96b5ad88d4f1903404fd108 152 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 152 47.579 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 PNUC_RS07415 aa4aa4a0b96b5ad88d4f1903404fd108 152 Pfam PF14437 MafB19-like deaminase 7 152 1.7E-32 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 PNUC_RS07415 aa4aa4a0b96b5ad88d4f1903404fd108 152 SUPERFAMILY SSF53927 4 152 2.01E-56 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PNUC_RS07415 aa4aa4a0b96b5ad88d4f1903404fd108 152 PANTHER PTHR11079 5 152 9.9E-48 T 22-04-2016 PNUC_RS07415 aa4aa4a0b96b5ad88d4f1903404fd108 152 Gene3D G3DSA:3.40.140.10 2 151 7.2E-61 T 22-04-2016 PNUC_RS09625 9abd3c4c82db5e2f545a022b8672222b 95 Pfam PF13488 Glycine zipper 30 73 7.8E-9 T 22-04-2016 PNUC_RS06355 ad11856a3c36b0294d3fb20c62f106ac 546 PANTHER PTHR11938 163 494 5.0E-82 T 22-04-2016 PNUC_RS06355 ad11856a3c36b0294d3fb20c62f106ac 546 SUPERFAMILY SSF51395 17 495 1.78E-134 T 22-04-2016 PNUC_RS06355 ad11856a3c36b0294d3fb20c62f106ac 546 PIRSF PIRSF500060 16 541 7.9E-220 T 22-04-2016 IPR027283 Glutamate synthase large subunit-like protein, bacteria PNUC_RS06355 ad11856a3c36b0294d3fb20c62f106ac 546 Gene3D G3DSA:3.20.20.70 55 497 1.0E-119 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS06355 ad11856a3c36b0294d3fb20c62f106ac 546 Pfam PF01645 Conserved region in glutamate synthase 161 478 1.1E-83 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PNUC_RS06355 ad11856a3c36b0294d3fb20c62f106ac 546 PANTHER PTHR11938:SF50 163 494 5.0E-82 T 22-04-2016 PNUC_RS06355 ad11856a3c36b0294d3fb20c62f106ac 546 PIRSF PIRSF006429 20 540 1.2E-155 T 22-04-2016 IPR024188 Glutamate synthase large subunit-like protein PNUC_RS06210 f966ec3ce021f28d77a251b402333b36 271 SUPERFAMILY SSF161098 67 245 1.96E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS06210 f966ec3ce021f28d77a251b402333b36 271 Gene3D G3DSA:1.10.3720.10 68 256 4.1E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS06210 f966ec3ce021f28d77a251b402333b36 271 PANTHER PTHR30151 20 271 1.1E-61 T 22-04-2016 PNUC_RS06210 f966ec3ce021f28d77a251b402333b36 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 256 2.0E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS10805 3fe3b561570451815a9c04f8cebb30fd 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.2E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS10805 3fe3b561570451815a9c04f8cebb30fd 44 PANTHER PTHR14503 1 44 1.3E-19 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS10805 3fe3b561570451815a9c04f8cebb30fd 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.028 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS10805 3fe3b561570451815a9c04f8cebb30fd 44 Pfam PF00468 Ribosomal protein L34 1 44 3.9E-23 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS10805 3fe3b561570451815a9c04f8cebb30fd 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 5.0E-15 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS10805 3fe3b561570451815a9c04f8cebb30fd 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 SUPERFAMILY SSF51735 1 188 1.32E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 Gene3D G3DSA:1.10.1040.10 192 334 1.2E-51 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 Gene3D G3DSA:3.40.50.720 1 191 8.2E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 330 33.641 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 188 328 1.2E-45 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 167 6.9E-38 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 SUPERFAMILY SSF48179 187 339 4.93E-51 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 141 161 8.0E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 181 205 8.0E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 246 263 8.0E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 8.0E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 206 230 8.0E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 PIRSF PIRSF000114 1 340 4.5E-96 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 PANTHER PTHR11728 1 339 1.1E-110 T 22-04-2016 PNUC_RS10075 b08b84eabba1f35462a588b3c89a1cca 340 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 196 217 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PNUC_RS05945 ccc0106ced501a743c67b663355766cf 562 SUPERFAMILY SSF116734 359 548 3.92E-37 T 22-04-2016 PNUC_RS05945 ccc0106ced501a743c67b663355766cf 562 PANTHER PTHR30408 70 554 9.1E-18 T 22-04-2016 PNUC_RS05945 ccc0106ced501a743c67b663355766cf 562 Pfam PF01420 Type I restriction modification DNA specificity domain 365 538 8.9E-15 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PNUC_RS05945 ccc0106ced501a743c67b663355766cf 562 Pfam PF01420 Type I restriction modification DNA specificity domain 81 257 1.3E-20 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PNUC_RS05945 ccc0106ced501a743c67b663355766cf 562 SUPERFAMILY SSF116734 73 250 1.06E-36 T 22-04-2016 PNUC_RS05945 ccc0106ced501a743c67b663355766cf 562 PANTHER PTHR30408:SF2 70 554 9.1E-18 T 22-04-2016 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 PANTHER PTHR22931:SF7 1 795 0.0 T 22-04-2016 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 28 353 1.1E-115 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 PANTHER PTHR22931 1 795 0.0 T 22-04-2016 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 702 720 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 422 433 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 PIRSF PIRSF000854 10 801 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 Gene3D G3DSA:3.30.1490.20 14 202 2.6E-67 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 Gene3D G3DSA:3.50.30.10 381 481 3.6E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 SUPERFAMILY SSF52009 354 475 1.83E-34 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 SUPERFAMILY SSF51621 473 795 1.26E-90 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 16 795 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 Gene3D G3DSA:3.20.20.60 489 795 5.9E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 SUPERFAMILY SSF56059 13 393 3.53E-107 T 22-04-2016 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 Pfam PF00391 PEP-utilising enzyme, mobile domain 392 463 6.1E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 487 791 2.6E-58 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PNUC_RS07500 a75a2fd725586a0697e1de360b4d21a3 801 Gene3D G3DSA:3.30.470.20 204 365 7.9E-58 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS03180 3614964323d01ef4769381b2ab665e6b 253 Gene3D G3DSA:3.90.550.10 2 135 2.7E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS03180 3614964323d01ef4769381b2ab665e6b 253 SUPERFAMILY SSF53448 1 149 1.27E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS03180 3614964323d01ef4769381b2ab665e6b 253 PANTHER PTHR10859 1 126 1.5E-26 T 22-04-2016 PNUC_RS03180 3614964323d01ef4769381b2ab665e6b 253 PANTHER PTHR10859:SF99 1 126 1.5E-26 T 22-04-2016 PNUC_RS03180 3614964323d01ef4769381b2ab665e6b 253 Pfam PF00535 Glycosyl transferase family 2 5 128 1.2E-17 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PNUC_RS04505 537e4b328239372fafb355b31740e03d 90 SUPERFAMILY SSF56349 6 68 2.3E-5 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PNUC_RS00810 588b06b238f1037df07cddcfdf3586c7 241 Pfam PF00834 Ribulose-phosphate 3 epimerase family 14 219 4.6E-87 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PNUC_RS00810 588b06b238f1037df07cddcfdf3586c7 241 PIRSF PIRSF001461 8 240 1.5E-100 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PNUC_RS00810 588b06b238f1037df07cddcfdf3586c7 241 PANTHER PTHR11749 10 238 1.3E-120 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PNUC_RS00810 588b06b238f1037df07cddcfdf3586c7 241 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 13 232 7.8E-93 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PNUC_RS00810 588b06b238f1037df07cddcfdf3586c7 241 SUPERFAMILY SSF51366 11 234 6.48E-70 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PNUC_RS00810 588b06b238f1037df07cddcfdf3586c7 241 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 41 55 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PNUC_RS00810 588b06b238f1037df07cddcfdf3586c7 241 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 148 170 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PNUC_RS00810 588b06b238f1037df07cddcfdf3586c7 241 Gene3D G3DSA:3.20.20.70 5 233 3.3E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PNUC_RS02985 8155183efdfdbf2b6bfe061c60e5d1ae 290 PANTHER PTHR11935 1 285 5.2E-100 T 22-04-2016 PNUC_RS02985 8155183efdfdbf2b6bfe061c60e5d1ae 290 SUPERFAMILY SSF56281 11 289 3.38E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS02985 8155183efdfdbf2b6bfe061c60e5d1ae 290 SMART SM00849 21 208 2.9E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS02985 8155183efdfdbf2b6bfe061c60e5d1ae 290 Gene3D G3DSA:3.60.15.10 10 253 3.5E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS02985 8155183efdfdbf2b6bfe061c60e5d1ae 290 Pfam PF00753 Metallo-beta-lactamase superfamily 34 208 8.8E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase PNUC_RS02985 8155183efdfdbf2b6bfe061c60e5d1ae 290 PANTHER PTHR11935:SF110 1 285 5.2E-100 T 22-04-2016 PNUC_RS06605 c052c5bbee9ddfef922d526cb2503aa1 259 Gene3D G3DSA:3.20.20.370 26 248 4.9E-39 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PNUC_RS06605 c052c5bbee9ddfef922d526cb2503aa1 259 Pfam PF01522 Polysaccharide deacetylase 29 177 1.4E-19 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PNUC_RS06605 c052c5bbee9ddfef922d526cb2503aa1 259 SUPERFAMILY SSF88713 24 248 1.03E-36 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PNUC_RS01960 2785a26c3316cecdb08228441740e357 182 Pfam PF11136 Protein of unknown function (DUF2889) 12 134 3.4E-43 T 22-04-2016 IPR021312 Protein of unknown function DUF2889 PNUC_RS00545 746938be8954cf9c0b771861df1d550b 160 PANTHER PTHR33371 1 159 1.9E-42 T 22-04-2016 PNUC_RS00545 746938be8954cf9c0b771861df1d550b 160 Pfam PF02470 MlaD protein 39 116 1.2E-22 T 22-04-2016 IPR003399 Mce/MlaD PNUC_RS00545 746938be8954cf9c0b771861df1d550b 160 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 147 4.6E-61 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 PNUC_RS03250 022d5a11d6499777aadebd337b88e565 371 PANTHER PTHR33529:SF2 1 358 2.6E-62 T 22-04-2016 PNUC_RS03250 022d5a11d6499777aadebd337b88e565 371 PANTHER PTHR33529 1 358 2.6E-62 T 22-04-2016 PNUC_RS03250 022d5a11d6499777aadebd337b88e565 371 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 350 2.9E-114 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 PNUC_RS03250 022d5a11d6499777aadebd337b88e565 371 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 350 4.3E-60 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 PNUC_RS06680 24cc29380392ddbcb9301e96da522473 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 108 3.3E-23 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD PNUC_RS01695 99da3bbb88ef28713d74517c6186bfff 313 SUPERFAMILY SSF51197 32 270 2.38E-37 T 22-04-2016 PNUC_RS01695 99da3bbb88ef28713d74517c6186bfff 313 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 39 250 1.3E-17 T 22-04-2016 IPR008775 Phytanoyl-CoA dioxygenase PNUC_RS01695 99da3bbb88ef28713d74517c6186bfff 313 PANTHER PTHR20883 33 263 4.5E-13 T 22-04-2016 PNUC_RS01695 99da3bbb88ef28713d74517c6186bfff 313 Gene3D G3DSA:2.60.120.620 31 264 2.4E-34 T 22-04-2016 PNUC_RS03370 53161c4e2e19fa1d6296408cab2d633d 62 Pfam PF11943 Protein of unknown function (DUF3460) 4 60 1.5E-25 T 22-04-2016 IPR021853 Protein of unknown function DUF3460 PNUC_RS00840 eb95061a9ba1929d16dfcab72f2e4c20 411 Gene3D G3DSA:3.90.1150.10 289 406 7.0E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS00840 eb95061a9ba1929d16dfcab72f2e4c20 411 PANTHER PTHR13693 6 405 5.7E-137 T 22-04-2016 PNUC_RS00840 eb95061a9ba1929d16dfcab72f2e4c20 411 Gene3D G3DSA:3.40.640.10 62 288 1.9E-69 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS00840 eb95061a9ba1929d16dfcab72f2e4c20 411 PANTHER PTHR13693:SF53 6 405 5.7E-137 T 22-04-2016 PNUC_RS00840 eb95061a9ba1929d16dfcab72f2e4c20 411 SUPERFAMILY SSF53383 9 403 3.3E-89 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS00840 eb95061a9ba1929d16dfcab72f2e4c20 411 Pfam PF00155 Aminotransferase class I and II 48 397 4.8E-43 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PNUC_RS09140 f26200e0ed1718b17814a3db02953b24 212 PANTHER PTHR30353 1 205 1.4E-71 T 22-04-2016 IPR032818 DedA family PNUC_RS09140 f26200e0ed1718b17814a3db02953b24 212 Pfam PF09335 SNARE associated Golgi protein 49 173 1.3E-22 T 22-04-2016 IPR032816 SNARE associated Golgi protein PNUC_RS09140 f26200e0ed1718b17814a3db02953b24 212 PANTHER PTHR30353:SF0 1 205 1.4E-71 T 22-04-2016 PNUC_RS02540 3c2d8beccb4609a5c20a0419f1711f56 183 Gene3D G3DSA:1.20.1290.10 33 180 4.6E-36 T 22-04-2016 IPR029032 AhpD-like PNUC_RS02540 3c2d8beccb4609a5c20a0419f1711f56 183 SUPERFAMILY SSF69118 16 180 1.06E-28 T 22-04-2016 IPR029032 AhpD-like PNUC_RS02540 3c2d8beccb4609a5c20a0419f1711f56 183 Pfam PF02627 Carboxymuconolactone decarboxylase family 45 109 3.8E-8 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PNUC_RS02540 3c2d8beccb4609a5c20a0419f1711f56 183 PANTHER PTHR34846:SF2 4 179 1.4E-35 T 22-04-2016 PNUC_RS02540 3c2d8beccb4609a5c20a0419f1711f56 183 PANTHER PTHR34846 4 179 1.4E-35 T 22-04-2016 PNUC_RS09290 91837aa44f0cc2747aa352479cd2fab2 385 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 5 370 53.493 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS09290 91837aa44f0cc2747aa352479cd2fab2 385 Pfam PF01702 Queuine tRNA-ribosyltransferase 133 372 2.2E-84 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS09290 91837aa44f0cc2747aa352479cd2fab2 385 PANTHER PTHR21148:SF26 1 378 3.1E-162 T 22-04-2016 PNUC_RS09290 91837aa44f0cc2747aa352479cd2fab2 385 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 376 1.6E-149 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS09290 91837aa44f0cc2747aa352479cd2fab2 385 PANTHER PTHR21148 1 378 3.1E-162 T 22-04-2016 PNUC_RS09290 91837aa44f0cc2747aa352479cd2fab2 385 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 9 375 4.6E-157 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS09290 91837aa44f0cc2747aa352479cd2fab2 385 SUPERFAMILY SSF51713 5 374 2.75E-149 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS09290 91837aa44f0cc2747aa352479cd2fab2 385 Gene3D G3DSA:3.20.20.105 3 376 4.3E-158 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PNUC_RS08390 4dc78c4fdcf0ba53ac9fb1da24fdd268 271 PANTHER PTHR11941 1 268 3.1E-62 T 22-04-2016 PNUC_RS08390 4dc78c4fdcf0ba53ac9fb1da24fdd268 271 SUPERFAMILY SSF52096 13 270 6.59E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS08390 4dc78c4fdcf0ba53ac9fb1da24fdd268 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 270 1.1E-44 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PNUC_RS08390 4dc78c4fdcf0ba53ac9fb1da24fdd268 271 Gene3D G3DSA:3.90.226.10 9 208 6.2E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PNUC_RS08390 4dc78c4fdcf0ba53ac9fb1da24fdd268 271 Gene3D G3DSA:1.10.12.10 211 271 1.3E-12 T 22-04-2016 IPR014748 Crontonase, C-terminal PNUC_RS08600 4a06286f829d6a07ee790286549ddbb7 209 PANTHER PTHR31573 25 209 5.6E-73 T 22-04-2016 IPR032852 DNA oxidative demethylase ALKBH2 GO:0006281 PNUC_RS08600 4a06286f829d6a07ee790286549ddbb7 209 Gene3D G3DSA:2.60.120.590 27 204 4.2E-40 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like PNUC_RS08600 4a06286f829d6a07ee790286549ddbb7 209 SUPERFAMILY SSF51197 17 204 3.3E-61 T 22-04-2016 PNUC_RS08600 4a06286f829d6a07ee790286549ddbb7 209 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 26 202 5.6E-35 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like PNUC_RS08600 4a06286f829d6a07ee790286549ddbb7 209 PANTHER PTHR31573:SF1 25 209 5.6E-73 T 22-04-2016 PNUC_RS06080 401c46806ae658dc4f277eb045ee5491 161 TIGRFAM TIGR04487 SoxY_para_1: SoxY-related AACIE arm protein 11 159 3.6E-73 T 22-04-2016 IPR030997 SoxY-related AACIE arm protein PNUC_RS06080 401c46806ae658dc4f277eb045ee5491 161 Pfam PF13501 Sulfur oxidation protein SoxY 48 157 1.5E-27 T 22-04-2016 IPR032711 Ig-like SoxY domain PNUC_RS01875 0d5ac9d3b1bb9e6339c15829cdcfcb41 642 Gene3D G3DSA:3.40.50.300 393 639 3.8E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01875 0d5ac9d3b1bb9e6339c15829cdcfcb41 642 SUPERFAMILY SSF52540 394 640 6.73E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS01875 0d5ac9d3b1bb9e6339c15829cdcfcb41 642 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 619 641 1.2E-8 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PNUC_RS01875 0d5ac9d3b1bb9e6339c15829cdcfcb41 642 PANTHER PTHR24220:SF358 396 494 1.5E-110 T 22-04-2016 PNUC_RS01875 0d5ac9d3b1bb9e6339c15829cdcfcb41 642 PANTHER PTHR24220:SF358 510 642 1.5E-110 T 22-04-2016 PNUC_RS01875 0d5ac9d3b1bb9e6339c15829cdcfcb41 642 SMART SM00382 419 627 3.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain PNUC_RS01875 0d5ac9d3b1bb9e6339c15829cdcfcb41 642 PANTHER PTHR24220 396 494 1.5E-110 T 22-04-2016 PNUC_RS01875 0d5ac9d3b1bb9e6339c15829cdcfcb41 642 PANTHER PTHR24220 510 642 1.5E-110 T 22-04-2016 PNUC_RS01875 0d5ac9d3b1bb9e6339c15829cdcfcb41 642 Pfam PF02653 Branched-chain amino acid transport system / permease component 30 277 3.1E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PNUC_RS01875 0d5ac9d3b1bb9e6339c15829cdcfcb41 642 Pfam PF00005 ABC transporter 410 570 2.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PNUC_RS05110 1f388ac8f7225a6c4eef2375830eaaa3 282 PANTHER PTHR30213:SF0 11 274 6.3E-51 T 22-04-2016 PNUC_RS05110 1f388ac8f7225a6c4eef2375830eaaa3 282 Pfam PF03631 Virulence factor BrkB 24 269 1.2E-49 T 22-04-2016 IPR017039 Virulence factor BrkB PNUC_RS05110 1f388ac8f7225a6c4eef2375830eaaa3 282 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 14 269 5.0E-49 T 22-04-2016 IPR017039 Virulence factor BrkB PNUC_RS05110 1f388ac8f7225a6c4eef2375830eaaa3 282 PANTHER PTHR30213 11 274 6.3E-51 T 22-04-2016 PNUC_RS05110 1f388ac8f7225a6c4eef2375830eaaa3 282 PIRSF PIRSF035875 1 276 4.8E-38 T 22-04-2016 IPR017039 Virulence factor BrkB PNUC_RS03530 51acefb83146bd70ab3e6b9e544e7772 732 Pfam PF00593 TonB dependent receptor 463 729 2.5E-24 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PNUC_RS03530 51acefb83146bd70ab3e6b9e544e7772 732 Gene3D G3DSA:2.170.130.10 38 165 1.8E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PNUC_RS03530 51acefb83146bd70ab3e6b9e544e7772 732 Gene3D G3DSA:2.40.170.20 166 730 4.9E-57 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PNUC_RS03530 51acefb83146bd70ab3e6b9e544e7772 732 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 161 1.6E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PNUC_RS03530 51acefb83146bd70ab3e6b9e544e7772 732 PANTHER PTHR32552 457 732 1.2E-42 T 22-04-2016 PNUC_RS03530 51acefb83146bd70ab3e6b9e544e7772 732 PANTHER PTHR32552 1 219 1.2E-42 T 22-04-2016 PNUC_RS03530 51acefb83146bd70ab3e6b9e544e7772 732 PANTHER PTHR32552 244 440 1.2E-42 T 22-04-2016 PNUC_RS03530 51acefb83146bd70ab3e6b9e544e7772 732 SUPERFAMILY SSF56935 30 219 1.25E-89 T 22-04-2016 PNUC_RS03530 51acefb83146bd70ab3e6b9e544e7772 732 SUPERFAMILY SSF56935 247 730 1.25E-89 T 22-04-2016 PNUC_RS06550 4bdaa70d5862b7b963c2f25df585c081 231 Pfam PF13505 Outer membrane protein beta-barrel domain 7 231 2.4E-20 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel PNUC_RS06550 4bdaa70d5862b7b963c2f25df585c081 231 Gene3D G3DSA:2.40.160.20 10 231 1.7E-9 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PNUC_RS06550 4bdaa70d5862b7b963c2f25df585c081 231 SUPERFAMILY SSF103515 21 230 3.66E-9 T 22-04-2016 IPR005546 Autotransporter beta-domain PNUC_RS07720 347597735c636ee31b2b08ee8986407c 324 Gene3D G3DSA:3.40.50.1100 135 314 4.6E-76 T 22-04-2016 PNUC_RS07720 347597735c636ee31b2b08ee8986407c 324 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 313 9.6E-133 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 PNUC_RS07720 347597735c636ee31b2b08ee8986407c 324 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PNUC_RS07720 347597735c636ee31b2b08ee8986407c 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 302 6.7E-74 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PNUC_RS07720 347597735c636ee31b2b08ee8986407c 324 Gene3D G3DSA:3.40.50.1100 38 134 2.2E-38 T 22-04-2016 PNUC_RS07720 347597735c636ee31b2b08ee8986407c 324 PANTHER PTHR10314 8 319 6.5E-155 T 22-04-2016 PNUC_RS07720 347597735c636ee31b2b08ee8986407c 324 SUPERFAMILY SSF53686 5 310 3.14E-99 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PNUC_RS07720 347597735c636ee31b2b08ee8986407c 324 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 313 4.2E-138 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 PNUC_RS07720 347597735c636ee31b2b08ee8986407c 324 PANTHER PTHR10314:SF110 8 319 6.5E-155 T 22-04-2016 PNUC_RS02030 e5756f9797be7a6d763cc0cc0d0a0f58 199 SUPERFAMILY SSF53448 6 196 4.59E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS02030 e5756f9797be7a6d763cc0cc0d0a0f58 199 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 193 1.6E-63 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 PNUC_RS02030 e5756f9797be7a6d763cc0cc0d0a0f58 199 Gene3D G3DSA:3.90.550.10 4 198 6.5E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS02030 e5756f9797be7a6d763cc0cc0d0a0f58 199 Pfam PF12804 MobA-like NTP transferase domain 9 170 1.2E-30 T 22-04-2016 IPR025877 MobA-like NTP transferase PNUC_RS02030 e5756f9797be7a6d763cc0cc0d0a0f58 199 PANTHER PTHR19136:SF81 1 196 9.7E-41 T 22-04-2016 PNUC_RS02030 e5756f9797be7a6d763cc0cc0d0a0f58 199 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 195 27.386 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 PNUC_RS02030 e5756f9797be7a6d763cc0cc0d0a0f58 199 PANTHER PTHR19136 1 196 9.7E-41 T 22-04-2016 PNUC_RS10105 bf4ebb04c785cfbf60b429440eb7fb27 250 PANTHER PTHR10953:SF158 1 247 1.2E-81 T 22-04-2016 PNUC_RS10105 bf4ebb04c785cfbf60b429440eb7fb27 250 PANTHER PTHR10953 1 247 1.2E-81 T 22-04-2016 PNUC_RS10105 bf4ebb04c785cfbf60b429440eb7fb27 250 Pfam PF00899 ThiF family 9 243 1.2E-62 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PNUC_RS10105 bf4ebb04c785cfbf60b429440eb7fb27 250 Gene3D G3DSA:3.40.50.720 3 247 7.2E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain PNUC_RS10105 bf4ebb04c785cfbf60b429440eb7fb27 250 SUPERFAMILY SSF69572 2 247 3.53E-83 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PNUC_RS03740 2f54fd2a786b9ba357d6abf61731ea33 138 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 4 118 4.0E-10 T 22-04-2016 IPR002850 PIN family, putative toxin-antitoxin system toxin component PNUC_RS03740 2f54fd2a786b9ba357d6abf61731ea33 138 SUPERFAMILY SSF88723 4 121 5.33E-9 T 22-04-2016 IPR029060 PIN domain-like PNUC_RS03740 2f54fd2a786b9ba357d6abf61731ea33 138 Pfam PF13470 PIN domain 4 113 5.8E-19 T 22-04-2016 IPR002716 PIN domain PNUC_RS06695 86d0c6d4cac5ae9aa9a405a9196c652a 227 SUPERFAMILY SSF53474 2 226 1.24E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS06695 86d0c6d4cac5ae9aa9a405a9196c652a 227 Gene3D G3DSA:3.40.50.1820 2 226 5.0E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS06695 86d0c6d4cac5ae9aa9a405a9196c652a 227 Pfam PF01738 Dienelactone hydrolase family 13 224 6.0E-58 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 PNUC_RS06695 86d0c6d4cac5ae9aa9a405a9196c652a 227 PANTHER PTHR17630 8 227 2.6E-50 T 22-04-2016 PNUC_RS02270 5784a84bf72234ac651957de2f560692 289 Gene3D G3DSA:3.10.25.10 205 289 5.7E-11 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS02270 5784a84bf72234ac651957de2f560692 289 Gene3D G3DSA:3.40.50.170 4 198 2.6E-47 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS02270 5784a84bf72234ac651957de2f560692 289 Pfam PF00551 Formyl transferase 26 177 4.9E-27 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS02270 5784a84bf72234ac651957de2f560692 289 Pfam PF02911 Formyl transferase, C-terminal domain 202 289 6.4E-12 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS02270 5784a84bf72234ac651957de2f560692 289 PANTHER PTHR11138 10 289 7.2E-53 T 22-04-2016 PNUC_RS02270 5784a84bf72234ac651957de2f560692 289 SUPERFAMILY SSF53328 2 202 1.44E-52 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PNUC_RS02270 5784a84bf72234ac651957de2f560692 289 SUPERFAMILY SSF50486 201 249 8.16E-15 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 PNUC_RS10175 8891dddda88c86181f0a0f7717f4e695 238 PANTHER PTHR12277:SF79 121 225 8.5E-24 T 22-04-2016 PNUC_RS10175 8891dddda88c86181f0a0f7717f4e695 238 PANTHER PTHR12277:SF79 1 105 8.5E-24 T 22-04-2016 PNUC_RS10175 8891dddda88c86181f0a0f7717f4e695 238 SUPERFAMILY SSF53474 34 224 2.3E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS10175 8891dddda88c86181f0a0f7717f4e695 238 PANTHER PTHR12277 121 225 8.5E-24 T 22-04-2016 PNUC_RS10175 8891dddda88c86181f0a0f7717f4e695 238 PANTHER PTHR12277 1 105 8.5E-24 T 22-04-2016 PNUC_RS10175 8891dddda88c86181f0a0f7717f4e695 238 Gene3D G3DSA:3.40.50.1820 34 228 4.2E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS03855 bd0cce33ee40687d6a68b133372282b9 295 PANTHER PTHR32322:SF11 12 285 9.9E-85 T 22-04-2016 PNUC_RS03855 bd0cce33ee40687d6a68b133372282b9 295 Pfam PF00892 EamA-like transporter family 152 283 1.3E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PNUC_RS03855 bd0cce33ee40687d6a68b133372282b9 295 Pfam PF00892 EamA-like transporter family 13 137 2.7E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PNUC_RS03855 bd0cce33ee40687d6a68b133372282b9 295 PANTHER PTHR32322 12 285 9.9E-85 T 22-04-2016 PNUC_RS03855 bd0cce33ee40687d6a68b133372282b9 295 SUPERFAMILY SSF103481 46 138 8.37E-9 T 22-04-2016 PNUC_RS03855 bd0cce33ee40687d6a68b133372282b9 295 SUPERFAMILY SSF103481 190 286 1.14E-13 T 22-04-2016 PNUC_RS04075 208a4ac035908405aae87d66ac4e3ddb 217 PANTHER PTHR30183 4 207 2.2E-54 T 22-04-2016 PNUC_RS04075 208a4ac035908405aae87d66ac4e3ddb 217 SUPERFAMILY SSF161098 4 199 3.79E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS04075 208a4ac035908405aae87d66ac4e3ddb 217 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 8 201 3.6E-61 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 PNUC_RS04075 208a4ac035908405aae87d66ac4e3ddb 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 21 198 5.3E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS04075 208a4ac035908405aae87d66ac4e3ddb 217 Gene3D G3DSA:1.10.3720.10 5 208 2.2E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PNUC_RS05965 d60e7da8fcdc572c230a5acad140b19b 334 Pfam PF13289 SIR2-like domain 120 265 9.4E-9 T 22-04-2016 PNUC_RS09795 bea182fcf74c58875fdffe4272de4a70 450 Gene3D G3DSA:3.40.1480.10 271 449 1.9E-53 T 22-04-2016 IPR007835 MOFRL domain PNUC_RS09795 bea182fcf74c58875fdffe4272de4a70 450 Pfam PF05161 MOFRL family 336 442 8.2E-30 T 22-04-2016 IPR007835 MOFRL domain PNUC_RS09795 bea182fcf74c58875fdffe4272de4a70 450 PANTHER PTHR12227:SF0 55 448 1.7E-107 T 22-04-2016 PNUC_RS09795 bea182fcf74c58875fdffe4272de4a70 450 PANTHER PTHR12227 55 448 1.7E-107 T 22-04-2016 PNUC_RS09795 bea182fcf74c58875fdffe4272de4a70 450 Gene3D G3DSA:3.40.50.10180 18 270 2.0E-84 T 22-04-2016 PNUC_RS09795 bea182fcf74c58875fdffe4272de4a70 450 Pfam PF13660 Domain of unknown function (DUF4147) 18 254 3.7E-71 T 22-04-2016 IPR025286 MOFRL-associated domain PNUC_RS09795 bea182fcf74c58875fdffe4272de4a70 450 SUPERFAMILY SSF82544 15 448 4.05E-123 T 22-04-2016 PNUC_RS07650 6dbdabbd8b2841351e7fb2755f5b6a5f 647 PANTHER PTHR30540:SF7 18 647 3.1E-238 T 22-04-2016 PNUC_RS07650 6dbdabbd8b2841351e7fb2755f5b6a5f 647 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 27 647 33.949 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup PNUC_RS07650 6dbdabbd8b2841351e7fb2755f5b6a5f 647 PANTHER PTHR30540 18 647 3.1E-238 T 22-04-2016 PNUC_RS07650 6dbdabbd8b2841351e7fb2755f5b6a5f 647 Pfam PF02705 K+ potassium transporter 36 568 1.1E-212 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 PNUC_RS02545 61ea4548ecff271bfe7926cec45d741d 284 Gene3D G3DSA:2.60.120.10 2 255 2.0E-82 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS02545 61ea4548ecff271bfe7926cec45d741d 284 Pfam PF02678 Pirin 20 120 1.7E-35 T 22-04-2016 IPR003829 Pirin, N-terminal domain PNUC_RS02545 61ea4548ecff271bfe7926cec45d741d 284 PANTHER PTHR13903:SF8 1 281 3.8E-128 T 22-04-2016 PNUC_RS02545 61ea4548ecff271bfe7926cec45d741d 284 SUPERFAMILY SSF51182 1 282 8.26E-83 T 22-04-2016 IPR011051 RmlC-like cupin domain PNUC_RS02545 61ea4548ecff271bfe7926cec45d741d 284 PANTHER PTHR13903 1 281 3.8E-128 T 22-04-2016 IPR012093 Pirin PNUC_RS02545 61ea4548ecff271bfe7926cec45d741d 284 PIRSF PIRSF006232 1 284 2.2E-93 T 22-04-2016 IPR012093 Pirin PNUC_RS02545 61ea4548ecff271bfe7926cec45d741d 284 Pfam PF05726 Pirin C-terminal cupin domain 179 281 4.3E-30 T 22-04-2016 IPR008778 Pirin, C-terminal domain PNUC_RS05310 c88b24644d9c1c8c3837f52c9e1e76b5 160 Pfam PF13664 Domain of unknown function (DUF4149) 14 111 4.3E-18 T 22-04-2016 IPR025423 Domain of unknown function DUF4149 PNUC_RS10230 fbb6a7569fa5601d9a1af78e25d23659 215 PIRSF PIRSF001488 5 212 2.5E-47 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL PNUC_RS10230 fbb6a7569fa5601d9a1af78e25d23659 215 PANTHER PTHR35891 1 214 1.2E-41 T 22-04-2016 PNUC_RS10230 fbb6a7569fa5601d9a1af78e25d23659 215 ProSitePatterns PS00194 Thioredoxin family active site. 51 69 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PNUC_RS10230 fbb6a7569fa5601d9a1af78e25d23659 215 PANTHER PTHR35891:SF2 1 214 1.2E-41 T 22-04-2016 PNUC_RS10230 fbb6a7569fa5601d9a1af78e25d23659 215 SUPERFAMILY SSF52833 29 196 1.53E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS10230 fbb6a7569fa5601d9a1af78e25d23659 215 Pfam PF01323 DSBA-like thioredoxin domain 98 185 3.0E-11 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 PNUC_RS10230 fbb6a7569fa5601d9a1af78e25d23659 215 Gene3D G3DSA:3.40.30.10 30 211 1.7E-56 T 22-04-2016 IPR012336 Thioredoxin-like fold PNUC_RS09450 8e0ae0153f8466c288ca2d44d823db90 144 Gene3D G3DSA:3.10.450.50 9 132 1.1E-13 T 22-04-2016 IPR032710 NTF2-like domain PNUC_RS09450 8e0ae0153f8466c288ca2d44d823db90 144 SUPERFAMILY SSF54427 13 128 1.05E-17 T 22-04-2016 IPR032710 NTF2-like domain PNUC_RS09450 8e0ae0153f8466c288ca2d44d823db90 144 Pfam PF13474 SnoaL-like domain 13 127 3.2E-13 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain PNUC_RS08195 5adcebecedcce916d17f3332db2e7b37 216 PANTHER PTHR30462 2 199 5.5E-46 T 22-04-2016 PNUC_RS08195 5adcebecedcce916d17f3332db2e7b37 216 PANTHER PTHR30462:SF3 2 199 5.5E-46 T 22-04-2016 PNUC_RS08195 5adcebecedcce916d17f3332db2e7b37 216 Pfam PF04403 Paraquat-inducible protein A 46 200 6.1E-51 T 22-04-2016 IPR007498 Paraquat-inducible protein A PNUC_RS07820 88c37ee3527973fd28f19b87663d059a 399 PRINTS PR00799 Aspartate aminotransferase signature 275 300 6.1E-40 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PNUC_RS07820 88c37ee3527973fd28f19b87663d059a 399 PRINTS PR00799 Aspartate aminotransferase signature 343 361 6.1E-40 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PNUC_RS07820 88c37ee3527973fd28f19b87663d059a 399 PRINTS PR00799 Aspartate aminotransferase signature 208 220 6.1E-40 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PNUC_RS07820 88c37ee3527973fd28f19b87663d059a 399 PRINTS PR00799 Aspartate aminotransferase signature 177 196 6.1E-40 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PNUC_RS07820 88c37ee3527973fd28f19b87663d059a 399 Pfam PF00155 Aminotransferase class I and II 29 394 6.4E-83 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PNUC_RS07820 88c37ee3527973fd28f19b87663d059a 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 PNUC_RS07820 88c37ee3527973fd28f19b87663d059a 399 PANTHER PTHR11879 1 397 9.8E-224 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PNUC_RS07820 88c37ee3527973fd28f19b87663d059a 399 Gene3D G3DSA:3.40.640.10 48 317 6.1E-105 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS07820 88c37ee3527973fd28f19b87663d059a 399 SUPERFAMILY SSF53383 1 398 3.3E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS07820 88c37ee3527973fd28f19b87663d059a 399 PANTHER PTHR11879:SF11 1 397 9.8E-224 T 22-04-2016 PNUC_RS05520 b5654d06170fc0d9928d6bc8a303e468 197 Pfam PF04366 Las17-binding protein actin regulator 108 197 7.4E-7 T 22-04-2016 IPR007461 Ysc84 actin-binding domain PNUC_RS09020 4722c26f66ef893a48f5f57144088338 55 Pfam PF00471 Ribosomal protein L33 7 53 9.3E-18 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS09020 4722c26f66ef893a48f5f57144088338 55 SUPERFAMILY SSF57829 1 53 3.54E-19 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 PNUC_RS09020 4722c26f66ef893a48f5f57144088338 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 9.0E-26 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS09020 4722c26f66ef893a48f5f57144088338 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS09020 4722c26f66ef893a48f5f57144088338 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.696 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PNUC_RS09020 4722c26f66ef893a48f5f57144088338 55 PANTHER PTHR15238 1 55 1.2E-22 T 22-04-2016 PNUC_RS09575 8d16d10d7c9e5b59c5f0b7ce104ad75b 470 SUPERFAMILY SSF56349 97 256 3.83E-21 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PNUC_RS09575 8d16d10d7c9e5b59c5f0b7ce104ad75b 470 SUPERFAMILY SSF56349 292 431 3.83E-21 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PNUC_RS09575 8d16d10d7c9e5b59c5f0b7ce104ad75b 470 Gene3D G3DSA:1.10.443.10 192 255 4.2E-11 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS09575 8d16d10d7c9e5b59c5f0b7ce104ad75b 470 Gene3D G3DSA:1.10.443.10 288 434 4.2E-11 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PNUC_RS03995 0b3a69ad14a5f2f82f8b8313230a1d42 215 Gene3D G3DSA:3.20.19.10 1 205 1.6E-52 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PNUC_RS03995 0b3a69ad14a5f2f82f8b8313230a1d42 215 Pfam PF00694 Aconitase C-terminal domain 1 131 9.2E-39 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03995 0b3a69ad14a5f2f82f8b8313230a1d42 215 PANTHER PTHR11670:SF27 1 208 2.7E-102 T 22-04-2016 PNUC_RS03995 0b3a69ad14a5f2f82f8b8313230a1d42 215 SUPERFAMILY SSF52016 1 201 3.34E-63 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PNUC_RS03995 0b3a69ad14a5f2f82f8b8313230a1d42 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 6.0E-83 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03995 0b3a69ad14a5f2f82f8b8313230a1d42 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.771 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS03995 0b3a69ad14a5f2f82f8b8313230a1d42 215 PANTHER PTHR11670 1 208 2.7E-102 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PNUC_RS00160 7a14c255ce1e74141a25d446d5c3bb19 346 PANTHER PTHR19353 5 295 1.0E-24 T 22-04-2016 PNUC_RS00160 7a14c255ce1e74141a25d446d5c3bb19 346 Pfam PF00487 Fatty acid desaturase 39 293 5.9E-35 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 PNUC_RS00160 7a14c255ce1e74141a25d446d5c3bb19 346 PANTHER PTHR19353:SF24 5 295 1.0E-24 T 22-04-2016 PNUC_RS00100 b579a78b4a4c388edbccd148b184ce3d 291 PANTHER PTHR11410 145 291 4.5E-70 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PNUC_RS00100 b579a78b4a4c388edbccd148b184ce3d 291 PANTHER PTHR11410 3 125 4.5E-70 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PNUC_RS00100 b579a78b4a4c388edbccd148b184ce3d 291 PANTHER PTHR11410:SF7 145 291 4.5E-70 T 22-04-2016 PNUC_RS00100 b579a78b4a4c388edbccd148b184ce3d 291 PANTHER PTHR11410:SF7 3 125 4.5E-70 T 22-04-2016 PNUC_RS00100 b579a78b4a4c388edbccd148b184ce3d 291 ProSitePatterns PS00449 ATP synthase a subunit signature. 214 223 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site PNUC_RS00100 b579a78b4a4c388edbccd148b184ce3d 291 Pfam PF00119 ATP synthase A chain 50 284 2.2E-52 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PNUC_RS00100 b579a78b4a4c388edbccd148b184ce3d 291 Hamap MF_01393 ATP synthase subunit a [atpB]. 39 291 14.522 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PNUC_RS00100 b579a78b4a4c388edbccd148b184ce3d 291 SUPERFAMILY SSF81336 100 285 4.05E-39 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PNUC_RS00100 b579a78b4a4c388edbccd148b184ce3d 291 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 41 286 4.0E-43 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PNUC_RS00100 b579a78b4a4c388edbccd148b184ce3d 291 Gene3D G3DSA:1.20.120.220 102 291 7.7E-49 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PNUC_RS07090 934e1019d3a314642fa7f11b6c7986ec 73 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 11 73 1.3E-12 T 22-04-2016 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich PNUC_RS07090 934e1019d3a314642fa7f11b6c7986ec 73 Pfam PF09493 Tryptophan-rich protein (DUF2389) 12 73 2.3E-20 T 22-04-2016 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich PNUC_RS08460 fd3868811b2869e8c5b16e62a031fe78 142 Pfam PF10003 Integral membrane protein (DUF2244) 6 140 1.8E-33 T 22-04-2016 IPR019253 Protein of unknown function DUF2244, transmembrane PNUC_RS09855 21a80e2a562b900389d025c778d826f5 305 PANTHER PTHR31367 8 305 2.7E-109 T 22-04-2016 PNUC_RS09855 21a80e2a562b900389d025c778d826f5 305 PANTHER PTHR31367:SF5 8 305 2.7E-109 T 22-04-2016 PNUC_RS09855 21a80e2a562b900389d025c778d826f5 305 Pfam PF06189 5'-nucleotidase 39 298 9.9E-109 T 22-04-2016 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|Reactome: REACT_1698 PNUC_RS05020 f1044ca21cffa9b2cf924cb55ac7b960 324 Pfam PF11306 Protein of unknown function (DUF3108) 112 311 9.9E-8 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 PNUC_RS05045 2e2f7d0579690a3d2760b3b46d72b931 214 Hamap MF_00165 Thymidylate kinase [tmk]. 10 214 27.24 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 PNUC_RS05045 2e2f7d0579690a3d2760b3b46d72b931 214 SUPERFAMILY SSF52540 9 201 1.54E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05045 2e2f7d0579690a3d2760b3b46d72b931 214 PANTHER PTHR10344:SF0 4 203 2.6E-56 T 22-04-2016 PNUC_RS05045 2e2f7d0579690a3d2760b3b46d72b931 214 Gene3D G3DSA:3.40.50.300 9 208 2.3E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS05045 2e2f7d0579690a3d2760b3b46d72b931 214 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 9 202 1.2E-45 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 PNUC_RS05045 2e2f7d0579690a3d2760b3b46d72b931 214 PANTHER PTHR10344 4 203 2.6E-56 T 22-04-2016 PNUC_RS05045 2e2f7d0579690a3d2760b3b46d72b931 214 Pfam PF02223 Thymidylate kinase 14 203 4.4E-41 T 22-04-2016 PNUC_RS08265 9b2eb42832296933b21ed933722217c8 268 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 5 219 1.2E-12 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type PNUC_RS08265 9b2eb42832296933b21ed933722217c8 268 PANTHER PTHR34990 4 256 2.2E-116 T 22-04-2016 PNUC_RS08265 9b2eb42832296933b21ed933722217c8 268 SUPERFAMILY SSF56300 180 241 1.3E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS08265 9b2eb42832296933b21ed933722217c8 268 SUPERFAMILY SSF56300 3 121 1.3E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS08265 9b2eb42832296933b21ed933722217c8 268 Gene3D G3DSA:3.60.21.10 184 240 6.7E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS08265 9b2eb42832296933b21ed933722217c8 268 Gene3D G3DSA:3.60.21.10 4 122 6.7E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PNUC_RS08265 9b2eb42832296933b21ed933722217c8 268 PANTHER PTHR34990:SF2 4 256 2.2E-116 T 22-04-2016 PNUC_RS00025 013c5eb1cc6150ee0876f2611b8dec0a 74 Pfam PF12512 Protein of unknown function (DUF3717) 4 68 4.8E-28 T 22-04-2016 IPR022191 Protein of unknown function DUF3717 PNUC_RS08910 e6234886dc169e0557f1269e66a68327 325 Gene3D G3DSA:3.30.200.20 1 107 3.7E-34 T 22-04-2016 PNUC_RS08910 e6234886dc169e0557f1269e66a68327 325 Gene3D G3DSA:3.90.1200.10 115 324 5.4E-61 T 22-04-2016 PNUC_RS08910 e6234886dc169e0557f1269e66a68327 325 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 320 3.2E-96 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 PNUC_RS08910 e6234886dc169e0557f1269e66a68327 325 Pfam PF01636 Phosphotransferase enzyme family 27 268 6.2E-28 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase PNUC_RS08910 e6234886dc169e0557f1269e66a68327 325 PANTHER PTHR21064 10 303 7.4E-45 T 22-04-2016 PNUC_RS08910 e6234886dc169e0557f1269e66a68327 325 Hamap MF_00301 Homoserine kinase [thrB]. 1 325 149.883 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 PNUC_RS08910 e6234886dc169e0557f1269e66a68327 325 SUPERFAMILY SSF56112 5 324 1.06E-68 T 22-04-2016 IPR011009 Protein kinase-like domain PNUC_RS10720 61b5359f9740624f8308bff1d87c484f 117 SUPERFAMILY SSF46785 40 112 6.86E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS10720 61b5359f9740624f8308bff1d87c484f 117 Gene3D G3DSA:1.10.10.10 49 114 4.5E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS03910 101de6402f46a23173382d26a6cc40b7 159 Pfam PF11911 Protein of unknown function (DUF3429) 5 151 1.4E-25 T 22-04-2016 IPR021836 Protein of unknown function DUF3429 PNUC_RS07790 d41b9e95bd9cc2f9d42dc725b4e31dfb 179 PANTHER PTHR14021:SF15 11 173 3.3E-39 T 22-04-2016 PNUC_RS07790 d41b9e95bd9cc2f9d42dc725b4e31dfb 179 Gene3D G3DSA:1.10.287.110 6 83 3.8E-22 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS07790 d41b9e95bd9cc2f9d42dc725b4e31dfb 179 SMART SM00271 12 77 4.8E-4 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS07790 d41b9e95bd9cc2f9d42dc725b4e31dfb 179 PANTHER PTHR14021 11 173 3.3E-39 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 PNUC_RS07790 d41b9e95bd9cc2f9d42dc725b4e31dfb 179 SUPERFAMILY SSF46565 13 86 6.15E-16 T 22-04-2016 IPR001623 DnaJ domain PNUC_RS07790 d41b9e95bd9cc2f9d42dc725b4e31dfb 179 Gene3D G3DSA:1.20.1280.20 93 178 1.0E-19 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 PNUC_RS07790 d41b9e95bd9cc2f9d42dc725b4e31dfb 179 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 12 179 20.548 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 PNUC_RS07790 d41b9e95bd9cc2f9d42dc725b4e31dfb 179 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 24 175 5.6E-28 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 PNUC_RS07790 d41b9e95bd9cc2f9d42dc725b4e31dfb 179 Pfam PF07743 HSCB C-terminal oligomerisation domain 98 171 7.2E-15 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 PNUC_RS07790 d41b9e95bd9cc2f9d42dc725b4e31dfb 179 SUPERFAMILY SSF47144 89 177 8.5E-17 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 PNUC_RS10025 9d661f1a41d0c690b38e690f3edd74c6 240 Pfam PF02104 SURF1 family 2 217 1.2E-25 T 22-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 PNUC_RS02525 6f22d8c2fcb7c91797340d30852163b4 334 SUPERFAMILY SSF53850 111 294 8.69E-13 T 22-04-2016 PNUC_RS02525 6f22d8c2fcb7c91797340d30852163b4 334 PANTHER PTHR30349 11 301 4.2E-79 T 22-04-2016 PNUC_RS02525 6f22d8c2fcb7c91797340d30852163b4 334 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 330 2.4E-84 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS02525 6f22d8c2fcb7c91797340d30852163b4 334 PANTHER PTHR30349:SF1 11 301 4.2E-79 T 22-04-2016 PNUC_RS02525 6f22d8c2fcb7c91797340d30852163b4 334 PIRSF PIRSF017082 1 333 1.1E-78 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS01400 a933cc5c2fa1cb86d477b797bd3e9465 170 PANTHER PTHR21058 16 163 4.2E-54 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01400 a933cc5c2fa1cb86d477b797bd3e9465 170 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 16 157 26.29 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01400 a933cc5c2fa1cb86d477b797bd3e9465 170 SUPERFAMILY SSF52121 13 155 1.02E-48 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01400 a933cc5c2fa1cb86d477b797bd3e9465 170 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 21 153 1.3E-47 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01400 a933cc5c2fa1cb86d477b797bd3e9465 170 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 21 153 7.5E-39 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS01400 a933cc5c2fa1cb86d477b797bd3e9465 170 Gene3D G3DSA:3.40.50.960 12 153 8.9E-53 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PNUC_RS04565 e8acf91332521ebb855631bfb4ee74b7 153 Pfam PF01713 Smr domain 46 106 2.8E-5 T 22-04-2016 IPR002625 Smr domain PNUC_RS04565 e8acf91332521ebb855631bfb4ee74b7 153 SUPERFAMILY SSF160443 46 97 3.66E-6 T 22-04-2016 IPR002625 Smr domain PNUC_RS04760 3355f10bbee88807290b8501a256b870 155 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 122 5.3E-21 T 22-04-2016 PNUC_RS04760 3355f10bbee88807290b8501a256b870 155 SUPERFAMILY SSF54593 4 146 9.25E-18 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PNUC_RS04760 3355f10bbee88807290b8501a256b870 155 Gene3D G3DSA:3.10.180.10 4 146 1.3E-16 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PNUC_RS04760 3355f10bbee88807290b8501a256b870 155 PANTHER PTHR21366:SF0 4 154 1.2E-32 T 22-04-2016 PNUC_RS04760 3355f10bbee88807290b8501a256b870 155 PANTHER PTHR21366 4 154 1.2E-32 T 22-04-2016 PNUC_RS09895 b29e3346c95b3d48291d4ad9d447031a 213 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 23 206 6.8E-30 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related PNUC_RS09895 b29e3346c95b3d48291d4ad9d447031a 213 PANTHER PTHR37481 13 211 6.7E-15 T 22-04-2016 PNUC_RS09895 b29e3346c95b3d48291d4ad9d447031a 213 PANTHER PTHR37481:SF1 13 211 6.7E-15 T 22-04-2016 PNUC_RS09895 b29e3346c95b3d48291d4ad9d447031a 213 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 18 205 3.7E-36 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PNUC_RS07020 a29d986e888097828de72cec2325d9dc 146 SUPERFAMILY SSF55729 18 144 2.49E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS07020 a29d986e888097828de72cec2325d9dc 146 Gene3D G3DSA:3.40.630.30 18 141 1.5E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS07020 a29d986e888097828de72cec2325d9dc 146 PANTHER PTHR13355 18 141 4.3E-36 T 22-04-2016 PNUC_RS07020 a29d986e888097828de72cec2325d9dc 146 Pfam PF13673 Acetyltransferase (GNAT) domain 24 142 7.6E-23 T 22-04-2016 IPR000182 GNAT domain GO:0008080 PNUC_RS07020 a29d986e888097828de72cec2325d9dc 146 PANTHER PTHR13355:SF8 18 141 4.3E-36 T 22-04-2016 PNUC_RS02355 2d82a292d9ee7f41497ee490c88f6b60 327 PIRSF PIRSF017082 3 326 8.8E-66 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS02355 2d82a292d9ee7f41497ee490c88f6b60 327 SUPERFAMILY SSF53850 98 287 2.65E-9 T 22-04-2016 PNUC_RS02355 2d82a292d9ee7f41497ee490c88f6b60 327 PANTHER PTHR30349:SF1 7 289 4.4E-65 T 22-04-2016 PNUC_RS02355 2d82a292d9ee7f41497ee490c88f6b60 327 PANTHER PTHR30349 7 289 4.4E-65 T 22-04-2016 PNUC_RS02355 2d82a292d9ee7f41497ee490c88f6b60 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 323 1.3E-68 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PNUC_RS08080 f19625f15a726ebf5e6831deca8fe4b5 287 PANTHER PTHR10992 1 287 9.6E-55 T 22-04-2016 PNUC_RS08080 f19625f15a726ebf5e6831deca8fe4b5 287 PRINTS PR00412 Epoxide hydrolase signature 262 284 3.2E-20 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PNUC_RS08080 f19625f15a726ebf5e6831deca8fe4b5 287 PRINTS PR00412 Epoxide hydrolase signature 48 63 3.2E-20 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PNUC_RS08080 f19625f15a726ebf5e6831deca8fe4b5 287 PRINTS PR00412 Epoxide hydrolase signature 28 46 3.2E-20 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PNUC_RS08080 f19625f15a726ebf5e6831deca8fe4b5 287 PRINTS PR00412 Epoxide hydrolase signature 94 107 3.2E-20 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PNUC_RS08080 f19625f15a726ebf5e6831deca8fe4b5 287 PRINTS PR00412 Epoxide hydrolase signature 230 246 3.2E-20 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PNUC_RS08080 f19625f15a726ebf5e6831deca8fe4b5 287 SUPERFAMILY SSF53474 3 287 4.34E-63 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS08080 f19625f15a726ebf5e6831deca8fe4b5 287 Pfam PF12697 Alpha/beta hydrolase family 24 279 2.2E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PNUC_RS08080 f19625f15a726ebf5e6831deca8fe4b5 287 PANTHER PTHR10992:SF778 1 287 9.6E-55 T 22-04-2016 PNUC_RS08080 f19625f15a726ebf5e6831deca8fe4b5 287 Gene3D G3DSA:3.40.50.1820 4 287 3.4E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS08300 c6e9a1e831fc7d462d050b3d3a8c8279 476 PANTHER PTHR39441 28 476 5.3E-83 T 22-04-2016 PNUC_RS08300 c6e9a1e831fc7d462d050b3d3a8c8279 476 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 67 465 1.6E-135 T 22-04-2016 IPR018721 Protein of unknown function DUF2252 PNUC_RS05240 15b0531ffedf73321ad453c7d9852d2f 169 PANTHER PTHR33741 3 160 1.3E-21 T 22-04-2016 PNUC_RS05240 15b0531ffedf73321ad453c7d9852d2f 169 Pfam PF04982 HPP family 34 145 5.7E-28 T 22-04-2016 IPR007065 HPP PNUC_RS08825 59ef6f7d63abc9fe101097ed3eeedb10 246 SUPERFAMILY SSF50494 37 205 1.47E-5 T 22-04-2016 IPR009003 Peptidase S1, PA clan PNUC_RS04590 e364b4071e6527e7aa2bb2f3150241ca 185 Pfam PF01048 Phosphorylase superfamily 24 174 1.1E-13 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PNUC_RS04590 e364b4071e6527e7aa2bb2f3150241ca 185 SUPERFAMILY SSF53167 6 183 7.33E-26 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PNUC_RS04590 e364b4071e6527e7aa2bb2f3150241ca 185 Gene3D G3DSA:3.40.50.1580 21 178 3.6E-24 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PNUC_RS00465 ff1abedf7b291f0c86601b0d732d875b 164 Gene3D G3DSA:2.40.33.20 6 160 2.1E-15 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like PNUC_RS00465 ff1abedf7b291f0c86601b0d732d875b 164 SUPERFAMILY SSF50800 1 158 3.66E-20 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain PNUC_RS07170 58e42bbd0f3053ad2732e70413a5439f 309 SUPERFAMILY SSF56529 80 307 4.84E-63 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS07170 58e42bbd0f3053ad2732e70413a5439f 309 Gene3D G3DSA:3.90.850.10 79 307 7.5E-69 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS07170 58e42bbd0f3053ad2732e70413a5439f 309 PANTHER PTHR11820 1 309 4.3E-81 T 22-04-2016 PNUC_RS07170 58e42bbd0f3053ad2732e70413a5439f 309 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 93 308 1.7E-63 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS07170 58e42bbd0f3053ad2732e70413a5439f 309 PANTHER PTHR11820:SF6 1 309 4.3E-81 T 22-04-2016 PNUC_RS04190 89810ead177657e66b9512dbbb01c832 270 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 45 270 3.6E-78 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 PNUC_RS04190 89810ead177657e66b9512dbbb01c832 270 SUPERFAMILY SSF46626 33 150 1.29E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04190 89810ead177657e66b9512dbbb01c832 270 Gene3D G3DSA:1.10.760.10 78 269 2.8E-57 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04190 89810ead177657e66b9512dbbb01c832 270 PIRSF PIRSF038455 15 270 5.6E-67 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 PNUC_RS04190 89810ead177657e66b9512dbbb01c832 270 SUPERFAMILY SSF46626 155 269 1.86E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS05590 a823fec9ee14b7825ac0012856214e75 208 SUPERFAMILY SSF159594 34 194 1.18E-19 T 22-04-2016 PNUC_RS05590 a823fec9ee14b7825ac0012856214e75 208 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 36 189 4.7E-9 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PNUC_RS05590 a823fec9ee14b7825ac0012856214e75 208 Gene3D G3DSA:3.40.50.10610 20 190 1.1E-13 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PNUC_RS00900 d4bb5ac3f817f674121e9d26e8ef20ae 423 PANTHER PTHR30474:SF2 30 415 7.5E-142 T 22-04-2016 PNUC_RS00900 d4bb5ac3f817f674121e9d26e8ef20ae 423 Pfam PF01098 Cell cycle protein 54 415 2.3E-99 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PNUC_RS00900 d4bb5ac3f817f674121e9d26e8ef20ae 423 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 49 422 40.547 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 PNUC_RS00900 d4bb5ac3f817f674121e9d26e8ef20ae 423 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 51 413 5.3E-121 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 PNUC_RS00900 d4bb5ac3f817f674121e9d26e8ef20ae 423 PANTHER PTHR30474 30 415 7.5E-142 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PNUC_RS06085 dfe65d28c7894a9357301262fd9ccbf8 150 Pfam PF00034 Cytochrome c 58 145 3.0E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS06085 dfe65d28c7894a9357301262fd9ccbf8 150 Gene3D G3DSA:1.10.760.10 34 146 4.2E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS06085 dfe65d28c7894a9357301262fd9ccbf8 150 SUPERFAMILY SSF46626 7 146 2.29E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS06085 dfe65d28c7894a9357301262fd9ccbf8 150 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 55 145 2.9E-22 T 22-04-2016 IPR030999 Sulfur oxidation c-type cytochrome SoxX PNUC_RS02400 4cdd89c0385879be4b8365f70c0c910e 67 Pfam PF05751 FixH 12 42 5.5E-6 T 22-04-2016 IPR008620 Nitrogen fixation protein FixH PNUC_RS08290 4714532b5f98a43f767fc1aa1d5117c5 238 Pfam PF02308 MgtC family 19 139 6.9E-34 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PNUC_RS08290 4714532b5f98a43f767fc1aa1d5117c5 238 PRINTS PR01837 MgtC/SapB protein signature 67 89 5.5E-39 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PNUC_RS08290 4714532b5f98a43f767fc1aa1d5117c5 238 PRINTS PR01837 MgtC/SapB protein signature 94 118 5.5E-39 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PNUC_RS08290 4714532b5f98a43f767fc1aa1d5117c5 238 PRINTS PR01837 MgtC/SapB protein signature 41 59 5.5E-39 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PNUC_RS08290 4714532b5f98a43f767fc1aa1d5117c5 238 PRINTS PR01837 MgtC/SapB protein signature 22 41 5.5E-39 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PNUC_RS08290 4714532b5f98a43f767fc1aa1d5117c5 238 PANTHER PTHR33778:SF3 1 233 8.5E-73 T 22-04-2016 PNUC_RS08290 4714532b5f98a43f767fc1aa1d5117c5 238 PANTHER PTHR33778 1 233 8.5E-73 T 22-04-2016 PNUC_RS06360 0628db6cb6c84c37cc126ea5c165f617 280 Pfam PF00990 Diguanylate cyclase, GGDEF domain 124 273 2.9E-33 T 22-04-2016 IPR000160 GGDEF domain PNUC_RS06360 0628db6cb6c84c37cc126ea5c165f617 280 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 122 275 9.1E-32 T 22-04-2016 IPR000160 GGDEF domain PNUC_RS06360 0628db6cb6c84c37cc126ea5c165f617 280 PANTHER PTHR10799 29 274 5.5E-14 T 22-04-2016 PNUC_RS06360 0628db6cb6c84c37cc126ea5c165f617 280 SMART SM00267 113 278 4.5E-26 T 22-04-2016 IPR000160 GGDEF domain PNUC_RS06360 0628db6cb6c84c37cc126ea5c165f617 280 Gene3D G3DSA:3.30.70.270 125 274 2.2E-37 T 22-04-2016 PNUC_RS06360 0628db6cb6c84c37cc126ea5c165f617 280 SUPERFAMILY SSF55073 129 273 1.65E-33 T 22-04-2016 IPR029787 Nucleotide cyclase PNUC_RS06360 0628db6cb6c84c37cc126ea5c165f617 280 PANTHER PTHR10799:SF706 29 274 5.5E-14 T 22-04-2016 PNUC_RS08845 8ce1bd7fa8fc477db8539517cedc6421 148 PANTHER PTHR28055:SF1 1 148 3.0E-50 T 22-04-2016 PNUC_RS08845 8ce1bd7fa8fc477db8539517cedc6421 148 Pfam PF09424 Yqey-like protein 4 146 5.9E-54 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial PNUC_RS08845 8ce1bd7fa8fc477db8539517cedc6421 148 Gene3D G3DSA:1.10.10.410 91 147 6.4E-22 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal PNUC_RS08845 8ce1bd7fa8fc477db8539517cedc6421 148 PANTHER PTHR28055 1 148 3.0E-50 T 22-04-2016 PNUC_RS08845 8ce1bd7fa8fc477db8539517cedc6421 148 Gene3D G3DSA:1.10.1510.10 1 90 1.2E-33 T 22-04-2016 PNUC_RS08845 8ce1bd7fa8fc477db8539517cedc6421 148 SUPERFAMILY SSF89095 1 146 2.35E-43 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 PNUC_RS04105 ef7639b3ef1b442f58a9ef17f1456f16 175 PANTHER PTHR30574 9 171 7.6E-23 T 22-04-2016 PNUC_RS04105 ef7639b3ef1b442f58a9ef17f1456f16 175 Pfam PF04143 Sulphur transport 12 162 2.7E-20 T 22-04-2016 IPR007272 Sulphur transport domain PNUC_RS02790 934ee39edd28e73a9006888164bf7c96 575 Pfam PF00474 Sodium:solute symporter family 67 492 3.5E-110 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PNUC_RS02790 934ee39edd28e73a9006888164bf7c96 575 PANTHER PTHR11819 36 564 1.1E-248 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PNUC_RS02790 934ee39edd28e73a9006888164bf7c96 575 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 67 492 7.7E-60 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PNUC_RS02790 934ee39edd28e73a9006888164bf7c96 575 PANTHER PTHR11819:SF13 36 564 1.1E-248 T 22-04-2016 PNUC_RS06220 8f4d3afab3770287e80459492e2cf71a 271 Pfam PF07859 alpha/beta hydrolase fold 69 212 5.3E-9 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 PNUC_RS06220 8f4d3afab3770287e80459492e2cf71a 271 PANTHER PTHR23024 2 266 3.6E-34 T 22-04-2016 PNUC_RS06220 8f4d3afab3770287e80459492e2cf71a 271 PANTHER PTHR23024:SF163 2 266 3.6E-34 T 22-04-2016 PNUC_RS06220 8f4d3afab3770287e80459492e2cf71a 271 SUPERFAMILY SSF53474 10 264 2.32E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS06220 8f4d3afab3770287e80459492e2cf71a 271 Gene3D G3DSA:3.40.50.1820 31 266 6.4E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PNUC_RS04275 b0a59469fe8f236817ede041556b62ab 390 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 15 384 6.2E-155 T 22-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition PNUC_RS04275 b0a59469fe8f236817ede041556b62ab 390 Gene3D G3DSA:3.40.630.30 185 335 4.5E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS04275 b0a59469fe8f236817ede041556b62ab 390 SUPERFAMILY SSF55729 185 360 1.67E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PNUC_RS04275 b0a59469fe8f236817ede041556b62ab 390 PANTHER PTHR31384:SF26 35 318 1.5E-51 T 22-04-2016 PNUC_RS04275 b0a59469fe8f236817ede041556b62ab 390 PANTHER PTHR31384 35 318 1.5E-51 T 22-04-2016 PNUC_RS03705 127d86fad1dc11509d3f501749c9c735 72 Pfam PF04325 Protein of unknown function (DUF465) 19 65 1.1E-15 T 22-04-2016 IPR007420 Protein of unknown function DUF465 PNUC_RS09195 18d4fdf64ef4c6204502dc290329ccc5 184 Gene3D G3DSA:2.30.22.10 129 183 1.2E-22 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 PNUC_RS09195 18d4fdf64ef4c6204502dc290329ccc5 184 Hamap MF_01151 Protein GrpE [grpE]. 3 182 19.05 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PNUC_RS09195 18d4fdf64ef4c6204502dc290329ccc5 184 SUPERFAMILY SSF51064 130 182 4.32E-16 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 PNUC_RS09195 18d4fdf64ef4c6204502dc290329ccc5 184 ProSitePatterns PS01071 grpE protein signature. 138 180 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PNUC_RS09195 18d4fdf64ef4c6204502dc290329ccc5 184 Pfam PF01025 GrpE 23 181 5.5E-47 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PNUC_RS09195 18d4fdf64ef4c6204502dc290329ccc5 184 SUPERFAMILY SSF58014 32 124 3.66E-23 T 22-04-2016 PNUC_RS09195 18d4fdf64ef4c6204502dc290329ccc5 184 PANTHER PTHR21237 1 184 1.5E-46 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PNUC_RS09195 18d4fdf64ef4c6204502dc290329ccc5 184 PRINTS PR00773 GrpE protein signature 161 180 1.1E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PNUC_RS09195 18d4fdf64ef4c6204502dc290329ccc5 184 PRINTS PR00773 GrpE protein signature 54 70 1.1E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PNUC_RS09195 18d4fdf64ef4c6204502dc290329ccc5 184 PRINTS PR00773 GrpE protein signature 135 150 1.1E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PNUC_RS09195 18d4fdf64ef4c6204502dc290329ccc5 184 PRINTS PR00773 GrpE protein signature 82 97 1.1E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PNUC_RS09195 18d4fdf64ef4c6204502dc290329ccc5 184 Gene3D G3DSA:3.90.20.20 31 124 3.3E-28 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil PNUC_RS05485 61b04d9b8a970000fbf88821226c19f3 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 118 3.4E-38 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 PNUC_RS05485 61b04d9b8a970000fbf88821226c19f3 119 PANTHER PTHR11058:SF10 3 119 6.0E-63 T 22-04-2016 PNUC_RS05485 61b04d9b8a970000fbf88821226c19f3 119 PANTHER PTHR11058 3 119 6.0E-63 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 PNUC_RS05485 61b04d9b8a970000fbf88821226c19f3 119 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 119 20.362 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 PNUC_RS09445 eace5edc22cdcb4ef407910bc1ff8d27 343 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 324 1.3E-59 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PNUC_RS09445 eace5edc22cdcb4ef407910bc1ff8d27 343 Gene3D G3DSA:3.40.50.2000 168 343 1.4E-57 T 22-04-2016 PNUC_RS09445 eace5edc22cdcb4ef407910bc1ff8d27 343 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 4 343 6.6E-122 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 PNUC_RS09445 eace5edc22cdcb4ef407910bc1ff8d27 343 Gene3D G3DSA:3.40.50.2000 4 147 6.6E-46 T 22-04-2016 PNUC_RS09445 eace5edc22cdcb4ef407910bc1ff8d27 343 SUPERFAMILY SSF53756 4 342 7.74E-94 T 22-04-2016 PNUC_RS09445 eace5edc22cdcb4ef407910bc1ff8d27 343 PANTHER PTHR30160 4 343 8.6E-85 T 22-04-2016 PNUC_RS09445 eace5edc22cdcb4ef407910bc1ff8d27 343 PANTHER PTHR30160:SF7 4 343 8.6E-85 T 22-04-2016 PNUC_RS07345 0f8404e37bfb2ce6c68e1a727d6a37e4 177 Pfam PF11749 Protein of unknown function (DUF3305) 3 164 4.0E-52 T 22-04-2016 IPR021736 Protein of unknown function DUF3305 PNUC_RS01810 11eefe758407548ef58edbcb98144ab7 125 Pfam PF09722 Protein of unknown function (DUF2384) 76 122 1.4E-9 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 PNUC_RS07455 aaf8013f94c4d3fae0f7948d886a4d01 116 Pfam PF03658 RnfH family Ubiquitin 21 93 7.5E-13 T 22-04-2016 IPR005346 RnfH protein PNUC_RS07455 aaf8013f94c4d3fae0f7948d886a4d01 116 Hamap MF_00460 Protein RnfH [rnfH]. 6 101 14.609 T 22-04-2016 IPR005346 RnfH protein PNUC_RS07455 aaf8013f94c4d3fae0f7948d886a4d01 116 SUPERFAMILY SSF54285 6 85 1.96E-10 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PNUC_RS07455 aaf8013f94c4d3fae0f7948d886a4d01 116 Gene3D G3DSA:3.10.20.280 2 95 1.5E-19 T 22-04-2016 IPR005346 RnfH protein PNUC_RS10730 25f93db05c40519ad4dde86066fcfb63 231 SUPERFAMILY SSF56925 27 231 4.55E-13 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PNUC_RS10730 25f93db05c40519ad4dde86066fcfb63 231 Gene3D G3DSA:2.40.160.20 9 231 7.7E-12 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PNUC_RS10730 25f93db05c40519ad4dde86066fcfb63 231 Pfam PF13505 Outer membrane protein beta-barrel domain 9 231 4.7E-22 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel PNUC_RS02295 c56613f9a6ab7c882d33f8951c58b766 418 Gene3D G3DSA:3.90.1150.10 280 404 2.1E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PNUC_RS02295 c56613f9a6ab7c882d33f8951c58b766 418 Gene3D G3DSA:3.40.640.10 50 279 1.3E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PNUC_RS02295 c56613f9a6ab7c882d33f8951c58b766 418 PANTHER PTHR11751:SF303 9 405 2.3E-173 T 22-04-2016 PNUC_RS02295 c56613f9a6ab7c882d33f8951c58b766 418 SUPERFAMILY SSF53383 7 402 7.37E-96 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PNUC_RS02295 c56613f9a6ab7c882d33f8951c58b766 418 PANTHER PTHR11751 9 405 2.3E-173 T 22-04-2016 PNUC_RS02295 c56613f9a6ab7c882d33f8951c58b766 418 Pfam PF00155 Aminotransferase class I and II 36 394 1.7E-51 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PNUC_RS01325 66b31f3ce7b4c3e2024aac8ce2678925 352 SUPERFAMILY SSF53756 3 307 2.01E-5 T 22-04-2016 PNUC_RS09825 354171cbf94568b51938070563dfcb25 206 PANTHER PTHR38693:SF1 99 206 4.4E-12 T 22-04-2016 PNUC_RS09825 354171cbf94568b51938070563dfcb25 206 PANTHER PTHR38693 99 206 4.4E-12 T 22-04-2016 PNUC_RS01765 4d1c873cb5274d13d4ab3c517deb4254 690 Pfam PF01757 Acyltransferase family 19 365 7.4E-23 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 PNUC_RS01765 4d1c873cb5274d13d4ab3c517deb4254 690 PANTHER PTHR23028 8 407 8.7E-82 T 22-04-2016 PNUC_RS01765 4d1c873cb5274d13d4ab3c517deb4254 690 PANTHER PTHR23028:SF53 8 407 8.7E-82 T 22-04-2016 PNUC_RS09630 47cd40d3c8b27d665dc2699cf8105843 129 PANTHER PTHR39624 1 128 3.3E-31 T 22-04-2016 PNUC_RS09630 47cd40d3c8b27d665dc2699cf8105843 129 Gene3D G3DSA:3.30.300.20 3 128 5.1E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PNUC_RS09630 47cd40d3c8b27d665dc2699cf8105843 129 PANTHER PTHR39624:SF2 1 128 3.3E-31 T 22-04-2016 PNUC_RS09630 47cd40d3c8b27d665dc2699cf8105843 129 Pfam PF02566 OsmC-like protein 34 125 1.9E-19 T 22-04-2016 IPR003718 OsmC/Ohr family PNUC_RS09630 47cd40d3c8b27d665dc2699cf8105843 129 SUPERFAMILY SSF82784 6 127 5.37E-32 T 22-04-2016 IPR003718 OsmC/Ohr family PNUC_RS04665 8057acc0750a88285d87b169405467a2 647 PANTHER PTHR30557:SF1 199 646 0.0 T 22-04-2016 PNUC_RS04665 8057acc0750a88285d87b169405467a2 647 PANTHER PTHR30557:SF1 137 167 0.0 T 22-04-2016 PNUC_RS04665 8057acc0750a88285d87b169405467a2 647 PANTHER PTHR30557:SF1 28 103 0.0 T 22-04-2016 PNUC_RS04665 8057acc0750a88285d87b169405467a2 647 Pfam PF13667 ThiC-associated domain 29 105 4.5E-29 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PNUC_RS04665 8057acc0750a88285d87b169405467a2 647 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 144 602 56.051 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PNUC_RS04665 8057acc0750a88285d87b169405467a2 647 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 144 600 1.1E-212 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PNUC_RS04665 8057acc0750a88285d87b169405467a2 647 PANTHER PTHR30557 199 646 0.0 T 22-04-2016 PNUC_RS04665 8057acc0750a88285d87b169405467a2 647 PANTHER PTHR30557 137 167 0.0 T 22-04-2016 PNUC_RS04665 8057acc0750a88285d87b169405467a2 647 PANTHER PTHR30557 28 103 0.0 T 22-04-2016 PNUC_RS04665 8057acc0750a88285d87b169405467a2 647 Pfam PF01964 Radical SAM ThiC family 146 597 8.9E-197 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PNUC_RS02340 14cffc186222191165028811245f0eca 80 PANTHER PTHR34477:SF1 3 79 3.4E-28 T 22-04-2016 PNUC_RS02340 14cffc186222191165028811245f0eca 80 PANTHER PTHR34477 3 79 3.4E-28 T 22-04-2016 PNUC_RS02340 14cffc186222191165028811245f0eca 80 Pfam PF01541 GIY-YIG catalytic domain 3 72 8.2E-15 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily PNUC_RS02340 14cffc186222191165028811245f0eca 80 SUPERFAMILY SSF82771 3 73 2.62E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily PNUC_RS00560 4483045c9e87e62dcb1d09879b16246b 85 Gene3D G3DSA:3.30.750.24 25 82 2.4E-5 T 22-04-2016 IPR002645 STAS domain PNUC_RS00560 4483045c9e87e62dcb1d09879b16246b 85 Pfam PF13466 STAS domain 5 80 9.1E-13 T 22-04-2016 IPR002645 STAS domain PNUC_RS00560 4483045c9e87e62dcb1d09879b16246b 85 SUPERFAMILY SSF52091 15 83 8.83E-6 T 22-04-2016 IPR002645 STAS domain PNUC_RS05595 a9d731cbd1e9050d76eac817329f8f23 309 PANTHER PTHR36698:SF2 4 274 7.1E-14 T 22-04-2016 PNUC_RS05595 a9d731cbd1e9050d76eac817329f8f23 309 Pfam PF02470 MlaD protein 41 135 3.7E-13 T 22-04-2016 IPR003399 Mce/MlaD PNUC_RS05595 a9d731cbd1e9050d76eac817329f8f23 309 PANTHER PTHR36698 4 274 7.1E-14 T 22-04-2016 PNUC_RS04570 147e8759d066fbaed700153af0b8d57c 118 PANTHER PTHR35893 15 118 1.0E-23 T 22-04-2016 PNUC_RS04570 147e8759d066fbaed700153af0b8d57c 118 Pfam PF05957 Bacterial protein of unknown function (DUF883) 26 118 5.8E-29 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB PNUC_RS04570 147e8759d066fbaed700153af0b8d57c 118 PANTHER PTHR35893:SF3 15 118 1.0E-23 T 22-04-2016 PNUC_RS03205 c060adf07e46fcc8ba52bbd6e7000a36 129 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 8.0E-25 T 22-04-2016 PNUC_RS03205 c060adf07e46fcc8ba52bbd6e7000a36 129 SUPERFAMILY SSF81301 1 109 3.92E-34 T 22-04-2016 PNUC_RS03205 c060adf07e46fcc8ba52bbd6e7000a36 129 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 7.2E-33 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PNUC_RS03205 c060adf07e46fcc8ba52bbd6e7000a36 129 Gene3D G3DSA:3.30.460.10 3 106 3.0E-35 T 22-04-2016 PNUC_RS03205 c060adf07e46fcc8ba52bbd6e7000a36 129 PANTHER PTHR21043 6 105 6.0E-33 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PNUC_RS03205 c060adf07e46fcc8ba52bbd6e7000a36 129 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 22.66 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 PIRSF PIRSF001554 1 388 7.9E-150 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 40.946 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 Gene3D G3DSA:3.40.50.261 242 383 2.2E-63 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 PANTHER PTHR11815:SF1 1 387 2.5E-225 T 22-04-2016 PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 Pfam PF00549 CoA-ligase 262 382 2.4E-25 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 Gene3D G3DSA:3.30.470.20 96 239 4.2E-56 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 Pfam PF08442 ATP-grasp domain 2 202 6.1E-79 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.5E-157 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 Gene3D G3DSA:3.30.1490.20 22 95 2.3E-35 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 PANTHER PTHR11815 1 387 2.5E-225 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 SUPERFAMILY SSF56059 1 238 3.36E-81 T 22-04-2016 PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 SUPERFAMILY SSF52210 241 384 1.27E-52 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS09500 3eeb7e548b8a9772645ff8f1adffc5b9 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PNUC_RS09805 1f0666900090f464b2240ff7bd2a7ee1 152 Gene3D G3DSA:3.90.79.10 3 144 4.5E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS09805 1f0666900090f464b2240ff7bd2a7ee1 152 Pfam PF00293 NUDIX domain 5 141 1.7E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PNUC_RS09805 1f0666900090f464b2240ff7bd2a7ee1 152 PANTHER PTHR22769:SF28 2 142 5.7E-24 T 22-04-2016 PNUC_RS09805 1f0666900090f464b2240ff7bd2a7ee1 152 PANTHER PTHR22769 2 142 5.7E-24 T 22-04-2016 PNUC_RS09805 1f0666900090f464b2240ff7bd2a7ee1 152 PRINTS PR01404 DATP pyrophosphohydrolase signature 1 17 2.9E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 PNUC_RS09805 1f0666900090f464b2240ff7bd2a7ee1 152 PRINTS PR01404 DATP pyrophosphohydrolase signature 70 89 2.9E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 PNUC_RS09805 1f0666900090f464b2240ff7bd2a7ee1 152 PRINTS PR01404 DATP pyrophosphohydrolase signature 17 38 2.9E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 PNUC_RS09805 1f0666900090f464b2240ff7bd2a7ee1 152 PRINTS PR01404 DATP pyrophosphohydrolase signature 98 119 2.9E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 PNUC_RS09805 1f0666900090f464b2240ff7bd2a7ee1 152 SUPERFAMILY SSF55811 3 141 2.98E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PNUC_RS10130 18b11932fc89007abbfe492c9af2d733 432 SUPERFAMILY SSF56059 278 359 5.61E-5 T 22-04-2016 PNUC_RS10130 18b11932fc89007abbfe492c9af2d733 432 Pfam PF08886 Glutamate-cysteine ligase 17 422 2.0E-199 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA PNUC_RS10130 18b11932fc89007abbfe492c9af2d733 432 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 425 1.5E-197 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA PNUC_RS09160 55a258be75dc9b848799b6b618bd7bd9 251 Pfam PF00308 Bacterial dnaA protein 60 232 7.8E-12 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA PNUC_RS09160 55a258be75dc9b848799b6b618bd7bd9 251 SUPERFAMILY SSF52540 57 228 1.62E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS09160 55a258be75dc9b848799b6b618bd7bd9 251 PANTHER PTHR30050:SF5 7 249 2.6E-38 T 22-04-2016 PNUC_RS09160 55a258be75dc9b848799b6b618bd7bd9 251 Gene3D G3DSA:1.10.8.60 184 249 2.1E-26 T 22-04-2016 PNUC_RS09160 55a258be75dc9b848799b6b618bd7bd9 251 PANTHER PTHR30050 7 249 2.6E-38 T 22-04-2016 PNUC_RS09160 55a258be75dc9b848799b6b618bd7bd9 251 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 116 130 3.4E-5 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PNUC_RS09160 55a258be75dc9b848799b6b618bd7bd9 251 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 58 78 3.4E-5 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PNUC_RS09160 55a258be75dc9b848799b6b618bd7bd9 251 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 148 175 3.4E-5 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PNUC_RS09160 55a258be75dc9b848799b6b618bd7bd9 251 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 9 249 2.3E-61 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 PNUC_RS09160 55a258be75dc9b848799b6b618bd7bd9 251 Gene3D G3DSA:3.40.50.300 4 178 4.0E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PNUC_RS07920 1ec9ed4519a6e0fe439a033d31472353 256 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 131 151 1.3E-47 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07920 1ec9ed4519a6e0fe439a033d31472353 256 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 110 130 1.3E-47 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07920 1ec9ed4519a6e0fe439a033d31472353 256 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 214 238 1.3E-47 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07920 1ec9ed4519a6e0fe439a033d31472353 256 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 55 72 1.3E-47 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07920 1ec9ed4519a6e0fe439a033d31472353 256 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 72 92 1.3E-47 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07920 1ec9ed4519a6e0fe439a033d31472353 256 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 166 192 1.3E-47 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07920 1ec9ed4519a6e0fe439a033d31472353 256 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 55 238 1.0E-70 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PNUC_RS07920 1ec9ed4519a6e0fe439a033d31472353 256 PANTHER PTHR30071 32 234 5.4E-58 T 22-04-2016 PNUC_RS07920 1ec9ed4519a6e0fe439a033d31472353 256 Pfam PF01578 Cytochrome C assembly protein 27 194 1.1E-25 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PNUC_RS06315 3d289a3d6c8fddfd7cd1ae585437677b 419 SUPERFAMILY SSF53822 32 409 1.07E-84 T 22-04-2016 IPR028082 Periplasmic binding protein-like I PNUC_RS06315 3d289a3d6c8fddfd7cd1ae585437677b 419 PANTHER PTHR30483:SF8 1 419 2.1E-204 T 22-04-2016 PNUC_RS06315 3d289a3d6c8fddfd7cd1ae585437677b 419 Gene3D G3DSA:3.40.50.2300 148 347 1.1E-66 T 22-04-2016 PNUC_RS06315 3d289a3d6c8fddfd7cd1ae585437677b 419 PANTHER PTHR30483 1 419 2.1E-204 T 22-04-2016 PNUC_RS06315 3d289a3d6c8fddfd7cd1ae585437677b 419 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 33 405 4.5E-174 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA PNUC_RS06315 3d289a3d6c8fddfd7cd1ae585437677b 419 Pfam PF13433 Periplasmic binding protein domain 33 408 5.0E-168 T 22-04-2016 PNUC_RS09440 c11af77666ba3553b86fe104c1b65edb 62 Pfam PF10276 Zinc-finger domain 18 51 5.1E-10 T 22-04-2016 IPR019401 Zinc finger, CHCC-type PNUC_RS09440 c11af77666ba3553b86fe104c1b65edb 62 Gene3D G3DSA:2.60.260.40 4 61 5.5E-19 T 22-04-2016 IPR019401 Zinc finger, CHCC-type PNUC_RS04850 ba0b6e2af0045759f84e9cd836d18d7d 196 Gene3D G3DSA:3.40.109.10 4 194 1.3E-42 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PNUC_RS04850 ba0b6e2af0045759f84e9cd836d18d7d 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 46.655 T 22-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 PNUC_RS04850 ba0b6e2af0045759f84e9cd836d18d7d 196 PANTHER PTHR23026 1 192 1.2E-81 T 22-04-2016 PNUC_RS04850 ba0b6e2af0045759f84e9cd836d18d7d 196 Pfam PF00881 Nitroreductase family 18 174 1.7E-12 T 22-04-2016 IPR029479 Nitroreductase PNUC_RS04850 ba0b6e2af0045759f84e9cd836d18d7d 196 SUPERFAMILY SSF55469 10 195 1.83E-43 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PNUC_RS04850 ba0b6e2af0045759f84e9cd836d18d7d 196 PANTHER PTHR23026:SF110 1 192 1.2E-81 T 22-04-2016 PNUC_RS07105 4c105661503328ee5041d71c8bed5c2f 255 PANTHER PTHR30060 8 252 1.0E-102 T 22-04-2016 PNUC_RS07105 4c105661503328ee5041d71c8bed5c2f 255 Pfam PF03741 Integral membrane protein TerC family 19 217 1.6E-46 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 PNUC_RS07105 4c105661503328ee5041d71c8bed5c2f 255 PANTHER PTHR30060:SF1 8 252 1.0E-102 T 22-04-2016 PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 PANTHER PTHR11206:SF90 61 79 4.0E-68 T 22-04-2016 PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 PANTHER PTHR11206:SF90 227 448 4.0E-68 T 22-04-2016 PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 508 4.2E-135 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 Pfam PF03023 MviN-like protein 28 471 1.0E-126 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 PRINTS PR01806 Virulence factor MviN signature 132 156 6.2E-79 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 PRINTS PR01806 Virulence factor MviN signature 415 432 6.2E-79 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 PRINTS PR01806 Virulence factor MviN signature 156 177 6.2E-79 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 PRINTS PR01806 Virulence factor MviN signature 52 68 6.2E-79 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 PRINTS PR01806 Virulence factor MviN signature 265 291 6.2E-79 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 PRINTS PR01806 Virulence factor MviN signature 33 52 6.2E-79 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 PRINTS PR01806 Virulence factor MviN signature 363 382 6.2E-79 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 PIRSF PIRSF002869 1 517 1.3E-142 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 PANTHER PTHR11206 61 79 4.0E-68 T 22-04-2016 PNUC_RS09130 6bda520800d4c346278ddb4fd04f6406 517 PANTHER PTHR11206 227 448 4.0E-68 T 22-04-2016 PNUC_RS04215 7bd992cfac011f532cfb846027ef2cd7 105 SUPERFAMILY SSF46626 12 98 1.27E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS04215 7bd992cfac011f532cfb846027ef2cd7 105 Gene3D G3DSA:1.10.760.10 3 57 2.0E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PNUC_RS06100 d118e5b185c26af8d320e9f7cd85a269 115 Pfam PF03788 LrgA family 12 105 7.6E-19 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 PNUC_RS10145 84ba0f46623c3f45c9c4d95b125a6277 278 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 40 278 8.4E-57 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 PNUC_RS10145 84ba0f46623c3f45c9c4d95b125a6277 278 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 15 255 3.6E-53 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 PNUC_RS01985 e85c49a7e17e4627122b5a2fbd6e9608 207 PANTHER PTHR13604 28 155 1.1E-25 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS01985 e85c49a7e17e4627122b5a2fbd6e9608 207 Pfam PF02586 SOS response associated peptidase (SRAP) 1 194 1.1E-31 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS01985 e85c49a7e17e4627122b5a2fbd6e9608 207 Gene3D G3DSA:3.90.1680.10 1 193 1.2E-35 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS01985 e85c49a7e17e4627122b5a2fbd6e9608 207 SUPERFAMILY SSF143081 2 203 3.01E-53 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PNUC_RS02165 3f9ab42de96f5bfc071cbb1d0b35f87a 356 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 3 355 9.3E-116 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 PNUC_RS02165 3f9ab42de96f5bfc071cbb1d0b35f87a 356 PIRSF PIRSF015557 1 356 4.6E-101 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 PNUC_RS02165 3f9ab42de96f5bfc071cbb1d0b35f87a 356 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 3 355 7.6E-122 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 PNUC_RS05350 d049391270b77f7c37d47899c31b67d5 154 PANTHER PTHR10642 11 151 5.4E-57 T 22-04-2016 PNUC_RS05350 d049391270b77f7c37d47899c31b67d5 154 Hamap MF_00042 Ribonuclease H [rnhA]. 10 152 33.069 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 PNUC_RS05350 d049391270b77f7c37d47899c31b67d5 154 Pfam PF00075 RNase H 12 149 8.4E-50 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 PNUC_RS05350 d049391270b77f7c37d47899c31b67d5 154 Gene3D G3DSA:3.30.420.10 12 151 5.0E-61 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS05350 d049391270b77f7c37d47899c31b67d5 154 SUPERFAMILY SSF53098 11 150 6.07E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS09840 46fd65dd79542f5919b1149666d94085 128 PANTHER PTHR35303:SF1 2 115 1.6E-39 T 22-04-2016 PNUC_RS09840 46fd65dd79542f5919b1149666d94085 128 PANTHER PTHR35303 2 115 1.6E-39 T 22-04-2016 PNUC_RS09840 46fd65dd79542f5919b1149666d94085 128 Pfam PF06155 Protein of unknown function (DUF971) 7 90 1.5E-26 T 22-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 PNUC_RS03590 bcac9cd00ae70c1ad2463918d9f38145 132 Pfam PF01850 PIN domain 4 123 8.2E-18 T 22-04-2016 IPR002716 PIN domain PNUC_RS03590 bcac9cd00ae70c1ad2463918d9f38145 132 Gene3D G3DSA:3.40.50.1010 3 131 1.8E-39 T 22-04-2016 IPR029060 PIN domain-like PNUC_RS03590 bcac9cd00ae70c1ad2463918d9f38145 132 PANTHER PTHR33653 1 131 2.3E-45 T 22-04-2016 PNUC_RS03590 bcac9cd00ae70c1ad2463918d9f38145 132 SMART SM00670 2 121 1.6E-4 T 22-04-2016 IPR002716 PIN domain PNUC_RS03590 bcac9cd00ae70c1ad2463918d9f38145 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 11.344 T 22-04-2016 IPR022907 VapC family GO:0004540 PNUC_RS03590 bcac9cd00ae70c1ad2463918d9f38145 132 SUPERFAMILY SSF88723 1 131 3.92E-40 T 22-04-2016 IPR029060 PIN domain-like PNUC_RS03590 bcac9cd00ae70c1ad2463918d9f38145 132 PANTHER PTHR33653:SF2 1 131 2.3E-45 T 22-04-2016 PNUC_RS10370 ae6a00046178b891d706dcd96024d1bc 315 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 104 303 2.3E-31 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PNUC_RS10370 ae6a00046178b891d706dcd96024d1bc 315 PANTHER PTHR30606 12 303 3.1E-41 T 22-04-2016 PNUC_RS08385 9b387e3879b839d25c4734727de2d75b 115 PANTHER PTHR37827 6 115 2.5E-12 T 22-04-2016 PNUC_RS08385 9b387e3879b839d25c4734727de2d75b 115 PANTHER PTHR37827:SF1 6 115 2.5E-12 T 22-04-2016 PNUC_RS01890 ae381162edb8a63d6ea4d8408687b1c0 272 PANTHER PTHR30269 1 272 6.3E-35 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS01890 ae381162edb8a63d6ea4d8408687b1c0 272 Pfam PF01925 Sulfite exporter TauE/SafE 11 264 9.7E-40 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS09355 e851e0487a0fa08bad169694b5f5d4e3 277 PANTHER PTHR12224:SF0 2 131 1.3E-19 T 22-04-2016 PNUC_RS09355 e851e0487a0fa08bad169694b5f5d4e3 277 PANTHER PTHR12224 2 131 1.3E-19 T 22-04-2016 IPR006813 Glycosyl transferase, family 17 GO:0003830|GO:0006487|GO:0016020 KEGG: 00500+2.4.1.14|KEGG: 00510+2.4.1.144|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7426|UniPathway: UPA00378 PNUC_RS09355 e851e0487a0fa08bad169694b5f5d4e3 277 Pfam PF04724 Glycosyltransferase family 17 2 242 9.1E-24 T 22-04-2016 IPR006813 Glycosyl transferase, family 17 GO:0003830|GO:0006487|GO:0016020 KEGG: 00500+2.4.1.14|KEGG: 00510+2.4.1.144|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7426|UniPathway: UPA00378 PNUC_RS09175 04513b31c55faa7c3707aa61d360fc4c 175 Gene3D G3DSA:3.30.70.560 3 151 8.1E-47 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PNUC_RS09175 04513b31c55faa7c3707aa61d360fc4c 175 SUPERFAMILY SSF55083 1 146 1.44E-46 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PNUC_RS09175 04513b31c55faa7c3707aa61d360fc4c 175 PANTHER PTHR20941 1 141 8.8E-48 T 22-04-2016 PNUC_RS09175 04513b31c55faa7c3707aa61d360fc4c 175 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 132 2.0E-34 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PNUC_RS09175 04513b31c55faa7c3707aa61d360fc4c 175 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 132 3.2E-33 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PNUC_RS05145 67c3981fe207c31beb9b62fcdf7f4a9a 229 Pfam PF11769 Protein of unknown function (DUF3313) 16 202 4.0E-29 T 22-04-2016 IPR021747 Protein of unknown function DUF3313 PNUC_RS07475 18aa20cc0d59e4d5b520c848402882b6 325 PANTHER PTHR34595 1 320 3.4E-95 T 22-04-2016 PNUC_RS07475 18aa20cc0d59e4d5b520c848402882b6 325 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 319 3.7E-102 T 22-04-2016 IPR007296 Domain of unknown function DUF403 PNUC_RS01320 908b05325738b7534231e84b6839e0dc 239 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 4 176 1.6E-30 T 22-04-2016 IPR002654 Glycosyl transferase, family 25 PNUC_RS01320 908b05325738b7534231e84b6839e0dc 239 PANTHER PTHR10730:SF27 8 226 2.8E-13 T 22-04-2016 PNUC_RS01320 908b05325738b7534231e84b6839e0dc 239 PANTHER PTHR10730 8 226 2.8E-13 T 22-04-2016 PNUC_RS05140 cb8755c9f6a1b0e312518269a0e1293f 87 Gene3D G3DSA:1.10.238.10 29 80 8.8E-5 T 22-04-2016 IPR011992 EF-hand domain pair PNUC_RS05140 cb8755c9f6a1b0e312518269a0e1293f 87 SUPERFAMILY SSF47473 33 85 3.29E-7 T 22-04-2016 IPR011992 EF-hand domain pair PNUC_RS06675 0f4f2ca300e96621499099baff4fa002 431 Pfam PF13520 Amino acid permease 16 403 2.5E-28 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PNUC_RS06675 0f4f2ca300e96621499099baff4fa002 431 PANTHER PTHR11785 422 429 4.6E-43 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PNUC_RS06675 0f4f2ca300e96621499099baff4fa002 431 PANTHER PTHR11785 15 375 4.6E-43 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PNUC_RS06675 0f4f2ca300e96621499099baff4fa002 431 PIRSF PIRSF006060 6 425 1.2E-49 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PNUC_RS06005 3b60235d4852508d5a027fce6272e8e4 230 PANTHER PTHR30625:SF3 17 220 6.7E-36 T 22-04-2016 PNUC_RS06005 3b60235d4852508d5a027fce6272e8e4 230 PANTHER PTHR30625 17 220 6.7E-36 T 22-04-2016 PNUC_RS06005 3b60235d4852508d5a027fce6272e8e4 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 100 209 1.9E-34 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PNUC_RS03300 35cde4563ae4e1459f841db9d9c0d759 272 PANTHER PTHR30269 1 271 9.1E-55 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS03300 35cde4563ae4e1459f841db9d9c0d759 272 PANTHER PTHR30269:SF18 1 271 9.1E-55 T 22-04-2016 PNUC_RS03300 35cde4563ae4e1459f841db9d9c0d759 272 Pfam PF01925 Sulfite exporter TauE/SafE 10 262 5.8E-49 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS07340 b36a92afe2da49335231ba1c8deeff01 184 Pfam PF11748 Protein of unknown function (DUF3306) 4 105 6.2E-26 T 22-04-2016 IPR021735 Protein of unknown function DUF3306 PNUC_RS08190 7c51aca6b1fcb0cc30c187f8a34d47ae 538 PANTHER PTHR30462:SF0 4 268 1.2E-80 T 22-04-2016 PNUC_RS08190 7c51aca6b1fcb0cc30c187f8a34d47ae 538 Pfam PF02470 MlaD protein 168 234 7.4E-6 T 22-04-2016 IPR003399 Mce/MlaD PNUC_RS08190 7c51aca6b1fcb0cc30c187f8a34d47ae 538 Pfam PF02470 MlaD protein 319 424 1.2E-13 T 22-04-2016 IPR003399 Mce/MlaD PNUC_RS08190 7c51aca6b1fcb0cc30c187f8a34d47ae 538 Pfam PF02470 MlaD protein 52 139 1.0E-8 T 22-04-2016 IPR003399 Mce/MlaD PNUC_RS08190 7c51aca6b1fcb0cc30c187f8a34d47ae 538 PANTHER PTHR30462 4 268 1.2E-80 T 22-04-2016 PNUC_RS10450 33ca3e25e6ebd65ab203bd950e444a22 97 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 97 19.914 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PNUC_RS10450 33ca3e25e6ebd65ab203bd950e444a22 97 SUPERFAMILY SSF141000 3 95 9.55E-25 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PNUC_RS10450 33ca3e25e6ebd65ab203bd950e444a22 97 PANTHER PTHR15004:SF0 4 97 3.2E-24 T 22-04-2016 PNUC_RS10450 33ca3e25e6ebd65ab203bd950e444a22 97 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 17 92 1.7E-17 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PNUC_RS10450 33ca3e25e6ebd65ab203bd950e444a22 97 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 1 97 1.3E-27 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PNUC_RS10450 33ca3e25e6ebd65ab203bd950e444a22 97 PANTHER PTHR15004 4 97 3.2E-24 T 22-04-2016 PNUC_RS01375 0d276d6a8ab37028c89f1985658f1e2f 152 Pfam PF11026 Protein of unknown function (DUF2721) 15 143 9.6E-27 T 22-04-2016 IPR021279 Protein of unknown function DUF2721 PNUC_RS06565 aa8599d3e27bc5e94c74db21c174b2f5 95 ProSitePatterns PS01043 Transposases, IS30 family, signature. 32 48 - T 22-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 PNUC_RS06565 aa8599d3e27bc5e94c74db21c174b2f5 95 SUPERFAMILY SSF53098 4 88 1.82E-13 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS06565 aa8599d3e27bc5e94c74db21c174b2f5 95 Gene3D G3DSA:3.30.420.10 18 86 2.3E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PNUC_RS06565 aa8599d3e27bc5e94c74db21c174b2f5 95 PANTHER PTHR10948 4 95 1.6E-27 T 22-04-2016 PNUC_RS08470 63e10307b77f7f262e77217dbdb3945e 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 38 110 2.6E-5 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PNUC_RS08470 63e10307b77f7f262e77217dbdb3945e 193 SUPERFAMILY SSF53254 37 180 7.23E-13 T 22-04-2016 IPR029033 Histidine phosphatase superfamily PNUC_RS08470 63e10307b77f7f262e77217dbdb3945e 193 Gene3D G3DSA:3.40.50.1240 35 168 6.8E-16 T 22-04-2016 IPR029033 Histidine phosphatase superfamily PNUC_RS06935 cf602715d63252f28b0c60e917c7aab1 97 Pfam PF04193 PQ loop repeat 13 65 9.4E-11 T 22-04-2016 IPR006603 PQ-loop repeat PNUC_RS01030 624b35ae07451a417c729d3079c720fd 255 SUPERFAMILY SSF56529 50 254 2.09E-56 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS01030 624b35ae07451a417c729d3079c720fd 255 Pfam PF10370 Domain of unknown function (DUF2437) 4 47 6.9E-11 T 22-04-2016 IPR018833 Domain of unknown function DUF2437 PNUC_RS01030 624b35ae07451a417c729d3079c720fd 255 PANTHER PTHR11820 40 255 1.4E-64 T 22-04-2016 PNUC_RS01030 624b35ae07451a417c729d3079c720fd 255 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 57 254 1.4E-46 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS01030 624b35ae07451a417c729d3079c720fd 255 PANTHER PTHR11820:SF6 40 255 1.4E-64 T 22-04-2016 PNUC_RS01030 624b35ae07451a417c729d3079c720fd 255 Gene3D G3DSA:3.90.850.10 50 254 6.3E-63 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PNUC_RS07840 8086711556070307e6e46602d153c1a9 141 Pfam PF08897 Domain of unknown function (DUF1841) 6 139 2.3E-59 T 22-04-2016 IPR014993 Protein of unknown function DUF1841 PNUC_RS10605 fb5f8159765bc09cde9a258fd22090b9 216 SUPERFAMILY SSF69118 35 202 5.55E-20 T 22-04-2016 IPR029032 AhpD-like PNUC_RS10605 fb5f8159765bc09cde9a258fd22090b9 216 PANTHER PTHR34846 65 215 2.1E-39 T 22-04-2016 PNUC_RS10605 fb5f8159765bc09cde9a258fd22090b9 216 PANTHER PTHR34846:SF1 65 215 2.1E-39 T 22-04-2016 PNUC_RS10605 fb5f8159765bc09cde9a258fd22090b9 216 Gene3D G3DSA:1.20.1290.10 67 199 4.2E-19 T 22-04-2016 IPR029032 AhpD-like PNUC_RS01710 3fb9bd36c3983c8cec1a2aaca8336fac 133 Pfam PF04138 GtrA-like protein 13 132 1.1E-14 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 PNUC_RS07980 83344ac69bee2a59451aed3d6ba130f3 124 PANTHER PTHR37466 1 120 3.1E-39 T 22-04-2016 PNUC_RS07980 83344ac69bee2a59451aed3d6ba130f3 124 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 8 120 6.6E-50 T 22-04-2016 IPR018714 Protein of unknown function DUF2237 PNUC_RS06390 1fc553666c93950571df09d02636c0fc 145 Gene3D G3DSA:2.60.120.10 9 134 3.1E-28 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PNUC_RS06390 1fc553666c93950571df09d02636c0fc 145 SUPERFAMILY SSF51182 52 127 6.43E-12 T 22-04-2016 IPR011051 RmlC-like cupin domain PNUC_RS04425 ef56c15b7a7e4349fce5f7a8ffa2fedb 201 SUPERFAMILY SSF54534 2 153 6.09E-24 T 22-04-2016 PNUC_RS04425 ef56c15b7a7e4349fce5f7a8ffa2fedb 201 Gene3D G3DSA:3.10.50.40 135 152 9.9E-6 T 22-04-2016 PNUC_RS04425 ef56c15b7a7e4349fce5f7a8ffa2fedb 201 Gene3D G3DSA:3.10.50.40 3 68 9.9E-6 T 22-04-2016 PNUC_RS05820 65c5738dddbf4134699f18c7c3d36552 197 Pfam PF06439 Domain of Unknown Function (DUF1080) 31 195 3.4E-37 T 22-04-2016 IPR010496 Domain of unknown function DUF1080 PNUC_RS07740 ad7feea2ba3bcbf08727daef5b2d0601 264 PANTHER PTHR30269:SF2 3 262 1.6E-55 T 22-04-2016 PNUC_RS07740 ad7feea2ba3bcbf08727daef5b2d0601 264 PANTHER PTHR30269 3 262 1.6E-55 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS07740 ad7feea2ba3bcbf08727daef5b2d0601 264 Pfam PF01925 Sulfite exporter TauE/SafE 12 261 1.8E-39 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS05920 6b6fa2ba5330cfb3c326ea049a1cb78a 444 Pfam PF03237 Terminase-like family 26 428 2.0E-15 T 22-04-2016 IPR004921 Terminase, large subunit PNUC_RS06890 be4dc0dc886c057995830b1793a81668 118 Pfam PF07233 Protein of unknown function (DUF1425) 34 114 7.7E-18 T 22-04-2016 IPR010824 Protein of unknown function DUF1425 PNUC_RS03560 742073e3456edf4ac5e4e52b8e252bca 334 SUPERFAMILY SSF47413 13 77 9.19E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PNUC_RS03560 742073e3456edf4ac5e4e52b8e252bca 334 Gene3D G3DSA:1.10.260.40 17 100 3.4E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PNUC_RS03525 515cbfdebc9dc3e2bb4e0882551e6bd9 123 Pfam PF11162 Protein of unknown function (DUF2946) 11 120 3.4E-11 T 22-04-2016 IPR021333 Protein of unknown function DUF2946 PNUC_RS01515 779d7ffa8fe6b7b8b15d269eace1ff0d 349 Pfam PF12281 Nucleotidyltransferase 110 319 6.8E-57 T 22-04-2016 IPR022550 Nucleotidyltransferase 8 PNUC_RS08360 22c1b0cde249e25cf876c83a883f5721 184 Pfam PF16036 Chalcone isomerase-like 38 171 3.8E-15 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 PNUC_RS03350 5f629ce032be6eb02daf0a7ec701cb05 90 Pfam PF13488 Glycine zipper 31 75 5.6E-8 T 22-04-2016 PNUC_RS06245 73ee5474f7e59ac83d445ddc2c674b96 141 Pfam PF13924 Lipocalin-like domain 8 139 8.0E-40 T 22-04-2016 IPR024311 Lipocalin-like domain PNUC_RS05300 5618582a9477e54520a6340ff8378c5d 224 SUPERFAMILY SSF53335 3 222 4.18E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS05300 5618582a9477e54520a6340ff8378c5d 224 Pfam PF01728 FtsJ-like methyltransferase 28 219 1.6E-48 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 PNUC_RS05300 5618582a9477e54520a6340ff8378c5d 224 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 220 29.892 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 PNUC_RS05300 5618582a9477e54520a6340ff8378c5d 224 Gene3D G3DSA:3.40.50.150 3 222 1.6E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PNUC_RS05300 5618582a9477e54520a6340ff8378c5d 224 PANTHER PTHR10920:SF20 1 222 6.8E-88 T 22-04-2016 PNUC_RS05300 5618582a9477e54520a6340ff8378c5d 224 PIRSF PIRSF005461 2 224 6.1E-67 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 PNUC_RS05300 5618582a9477e54520a6340ff8378c5d 224 PANTHER PTHR10920 1 222 6.8E-88 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 PNUC_RS02475 c898c276e898709ad99000c0248442d3 226 Gene3D G3DSA:1.20.950.20 2 183 2.6E-8 T 22-04-2016 PNUC_RS02475 c898c276e898709ad99000c0248442d3 226 SUPERFAMILY SSF81342 3 183 1.12E-37 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PNUC_RS02475 c898c276e898709ad99000c0248442d3 226 Pfam PF01292 Prokaryotic cytochrome b561 8 178 2.6E-19 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PNUC_RS04575 49e83aefbca00dd583c340fd68e903da 122 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 9 120 2.9E-18 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PNUC_RS01365 5fd1a17dca161dff02a11ba74767e345 539 Pfam PF02321 Outer membrane efflux protein 97 285 1.2E-20 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PNUC_RS01365 5fd1a17dca161dff02a11ba74767e345 539 Pfam PF02321 Outer membrane efflux protein 334 521 6.1E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PNUC_RS01365 5fd1a17dca161dff02a11ba74767e345 539 PANTHER PTHR30026 318 539 1.3E-61 T 22-04-2016 PNUC_RS01365 5fd1a17dca161dff02a11ba74767e345 539 PANTHER PTHR30026 91 295 1.3E-61 T 22-04-2016 PNUC_RS01365 5fd1a17dca161dff02a11ba74767e345 539 SUPERFAMILY SSF56954 324 537 3.79E-73 T 22-04-2016 PNUC_RS01365 5fd1a17dca161dff02a11ba74767e345 539 SUPERFAMILY SSF56954 93 297 3.79E-73 T 22-04-2016 PNUC_RS01365 5fd1a17dca161dff02a11ba74767e345 539 PANTHER PTHR30026:SF3 318 539 1.3E-61 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PNUC_RS01365 5fd1a17dca161dff02a11ba74767e345 539 PANTHER PTHR30026:SF3 91 295 1.3E-61 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PNUC_RS01365 5fd1a17dca161dff02a11ba74767e345 539 Gene3D G3DSA:1.20.1600.10 89 530 3.4E-62 T 22-04-2016 PNUC_RS06035 37422f139072a220f3ab365678b4a933 240 Pfam PF14023 Protein of unknown function (DUF4239) 44 230 2.1E-16 T 22-04-2016 IPR025333 Protein of unknown function DUF4239 PNUC_RS07250 4be87c69b601d9fb9092ac922d2e916f 197 Pfam PF06181 Protein of unknown function (DUF989) 109 191 2.3E-10 T 22-04-2016 IPR010389 Domain of unknown function DUF989 PNUC_RS07250 4be87c69b601d9fb9092ac922d2e916f 197 PIRSF PIRSF032086 10 197 4.7E-55 T 22-04-2016 IPR016988 Uncharacterised conserved protein UCP032086 PNUC_RS04715 08ca1e60916615fe6dae2b70fcfc06e4 391 Pfam PF05762 VWA domain containing CoxE-like protein 185 273 3.1E-10 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like PNUC_RS09515 a19eff1d2a9304ac757217860ed3f0f1 177 Pfam PF11086 Protein of unknown function (DUF2878) 4 160 1.1E-44 T 22-04-2016 IPR021306 Protein of unknown function DUF2878 PNUC_RS06685 8ec980c5b80e5590d3e56cf74f135642 241 PANTHER PTHR34979 7 234 6.8E-25 T 22-04-2016 PNUC_RS06685 8ec980c5b80e5590d3e56cf74f135642 241 Pfam PF03591 AzlC protein 21 168 2.7E-31 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease PNUC_RS02760 214dd601c96e0868f5d2a1b6a84134c2 261 PANTHER PTHR30269 16 260 3.0E-16 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS02760 214dd601c96e0868f5d2a1b6a84134c2 261 Pfam PF01925 Sulfite exporter TauE/SafE 25 255 5.5E-26 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PNUC_RS01760 563f7c4b0394b8b49bbb10447e43cb76 510 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 51 217 7.2E-6 T 22-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 PNUC_RS10825 cdd63ebc2f9fbaa8a29e3b589ea1e10d 310 Pfam PF07120 Protein of unknown function (DUF1376) 2 87 1.4E-30 T 22-04-2016 IPR010781 Protein of unknown function DUF1376 PNUC_RS03285 5179410cde54eb16b59c732d3d3bcee8 172 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 31 158 1.4E-25 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PNUC_RS03285 5179410cde54eb16b59c732d3d3bcee8 172 PANTHER PTHR35011 6 158 8.3E-29 T 22-04-2016 PNUC_RS03285 5179410cde54eb16b59c732d3d3bcee8 172 PANTHER PTHR35011:SF2 6 158 8.3E-29 T 22-04-2016 PNUC_RS08690 ae700d21c24d8c914330946a17f7af5e 30 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 9.4E-11 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 PNUC_RS08690 ae700d21c24d8c914330946a17f7af5e 30 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 2.3E-10 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 PNUC_RS04135 5876c79d126421a4700e3e169dd41695 70 Pfam PF11127 Protein of unknown function (DUF2892) 1 61 1.2E-21 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 PNUC_RS01770 b44c0fd57c01ae22de1869cf70ede5dd 298 Pfam PF13704 Glycosyl transferase family 2 10 125 3.1E-9 T 22-04-2016 PNUC_RS05735 11e99290fd70033ab2e684c68769035f 373 SUPERFAMILY SSF53756 189 365 6.36E-7 T 22-04-2016 PNUC_RS07245 4f733a9cc3a99753bc13b98745892f42 187 Pfam PF06439 Domain of Unknown Function (DUF1080) 21 181 1.5E-19 T 22-04-2016 IPR010496 Domain of unknown function DUF1080 PNUC_RS01730 751c408e4674d548c322ed258cd20d45 140 Pfam PF02681 Divergent PAP2 family 6 131 1.2E-33 T 22-04-2016 IPR003832 Acid phosphatase/vanadium-dependent haloperoxidase-related PNUC_RS01730 751c408e4674d548c322ed258cd20d45 140 PANTHER PTHR31446 7 133 1.2E-29 T 22-04-2016 PNUC_RS02970 ba3a14b75b92f23f6b98acc901535a2a 468 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 58 455 9.9E-131 T 22-04-2016 IPR018721 Protein of unknown function DUF2252 PNUC_RS02970 ba3a14b75b92f23f6b98acc901535a2a 468 PANTHER PTHR39441 12 466 2.5E-83 T 22-04-2016 PNUC_RS06115 f21b5dfa42b8bfeb796e183c1059131f 529 PANTHER PTHR11686 1 529 9.8E-221 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS06115 f21b5dfa42b8bfeb796e183c1059131f 529 Pfam PF01019 Gamma-glutamyltranspeptidase 33 524 1.8E-149 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS06115 f21b5dfa42b8bfeb796e183c1059131f 529 PANTHER PTHR11686:SF8 1 529 9.8E-221 T 22-04-2016 PNUC_RS06115 f21b5dfa42b8bfeb796e183c1059131f 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 346 364 1.4E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS06115 f21b5dfa42b8bfeb796e183c1059131f 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 107 125 1.4E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS06115 f21b5dfa42b8bfeb796e183c1059131f 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 40 65 1.4E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS06115 f21b5dfa42b8bfeb796e183c1059131f 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 400 415 1.4E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS06115 f21b5dfa42b8bfeb796e183c1059131f 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 223 239 1.4E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS06115 f21b5dfa42b8bfeb796e183c1059131f 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 125 144 1.4E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS06115 f21b5dfa42b8bfeb796e183c1059131f 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 252 271 1.4E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS06115 f21b5dfa42b8bfeb796e183c1059131f 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 424 441 1.4E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PNUC_RS06115 f21b5dfa42b8bfeb796e183c1059131f 529 SUPERFAMILY SSF56235 14 529 7.33E-170 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PNUC_RS07385 1f977a983648a79c66e3351e65ce453a 347 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 26 339 4.7E-75 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PNUC_RS07385 1f977a983648a79c66e3351e65ce453a 347 PANTHER PTHR40277 9 122 3.8E-19 T 22-04-2016 PNUC_RS07385 1f977a983648a79c66e3351e65ce453a 347 PANTHER PTHR40277 147 344 3.8E-19 T 22-04-2016 PNUC_RS07915 5cd2ce8d5db8c80f7abd6f143d3b931f 62 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 9 51 1.5E-14 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PNUC_RS07915 5cd2ce8d5db8c80f7abd6f143d3b931f 62 Pfam PF04995 Heme exporter protein D (CcmD) 12 52 1.8E-13 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PNUC_RS06545 9fb3630a23ed16838850edaae88b52d8 573 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 14 238 3.0E-9 T 22-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 PNUC_RS10040 411ec01e494bd5fa7c0a8c6ff075f856 65 Pfam PF11174 Protein of unknown function (DUF2970) 8 63 9.9E-21 T 22-04-2016 IPR021344 Protein of unknown function DUF2970 PNUC_RS05565 de049aab0c815cf72c964c49523ca46d 209 Pfam PF11304 Protein of unknown function (DUF3106) 53 152 8.6E-31 T 22-04-2016 IPR021455 Protein of unknown function DUF3106 PNUC_RS02420 2a2cd5c7291878b79bc64a3cab394d36 133 Pfam PF09945 Predicted membrane protein (DUF2177) 5 127 1.9E-41 T 22-04-2016 IPR018687 Protein of unknown function DUF2177, membrane PNUC_RS03775 cb68dc15c081e1dd049eea9110f3a124 101 Pfam PF13591 MerR HTH family regulatory protein 21 97 5.5E-18 T 22-04-2016 PNUC_RS05245 04babf9a6bb7b1275b4c994c7c36f0bb 174 Pfam PF04982 HPP family 59 168 1.8E-17 T 22-04-2016 IPR007065 HPP PNUC_RS10245 336314138dde99fca206de9b81c767db 105 Pfam PF08895 Domain of unknown function (DUF1840) 1 103 1.1E-28 T 22-04-2016 IPR014991 Protein of unknown function DUF1840 PNUC_RS06840 bcf21fac8ec0b79c70af9a31a58f42f2 272 Gene3D G3DSA:1.25.40.10 35 97 5.6E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS06840 bcf21fac8ec0b79c70af9a31a58f42f2 272 SUPERFAMILY SSF48452 38 98 1.0E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PNUC_RS02965 3065351f18787b7c5cf4f882444983ee 116 Gene3D G3DSA:1.20.1250.20 28 107 1.0E-4 T 22-04-2016 PNUC_RS00710 10f8df3ba20e6230db6435b038f77e97 226 SUPERFAMILY SSF53448 36 224 7.03E-7 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS00710 10f8df3ba20e6230db6435b038f77e97 226 Gene3D G3DSA:3.90.550.10 33 225 6.1E-5 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PNUC_RS00710 10f8df3ba20e6230db6435b038f77e97 226 Pfam PF13712 Glycosyltransferase like family 41 194 2.1E-10 T 22-04-2016 PNUC_RS03720 b6ba23d9197aa764855a25b07e5ec9bb 116 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 8 109 6.1E-29 T 22-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV PNUC_RS03720 b6ba23d9197aa764855a25b07e5ec9bb 116 PANTHER PTHR37309 6 116 1.0E-26 T 22-04-2016 PNUC_RS03720 b6ba23d9197aa764855a25b07e5ec9bb 116 PANTHER PTHR37309:SF1 6 116 1.0E-26 T 22-04-2016 PNUC_RS07990 ce31c891375826549134eda78ab8f06d 182 Pfam PF09361 Phasin protein 10 106 1.7E-11 T 22-04-2016 IPR018968 Phasin PNUC_RS04545 49b34cc83e88b1378bcc77cee42bcc24 191 Pfam PF09361 Phasin protein 8 107 3.2E-13 T 22-04-2016 IPR018968 Phasin PNUC_RS10710 79b05c7c8a152b65880ada91a5ff98ac 94 SUPERFAMILY SSF160272 11 75 6.41E-9 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 PNUC_RS03505 b28979d9a37e155703cf738deee2daa0 157 Pfam PF08909 Domain of unknown function (DUF1854) 27 156 3.1E-47 T 22-04-2016 IPR015005 Domain of unknown function DUF1854 PNUC_RS10625 106e5627e136f2c6e154b864a4401ec2 139 SMART SM00754 26 139 1.7E-31 T 22-04-2016 IPR010895 CHRD PNUC_RS10625 106e5627e136f2c6e154b864a4401ec2 139 Pfam PF07452 CHRD domain 29 137 1.5E-25 T 22-04-2016 IPR010895 CHRD PNUC_RS02510 98b313e901628878efd6774edb98c23b 161 Pfam PF02417 Chromate transporter 3 147 1.7E-28 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 PNUC_RS02510 98b313e901628878efd6774edb98c23b 161 PANTHER PTHR33567 3 161 1.8E-25 T 22-04-2016 PNUC_RS02385 718eacf0f0b5b3d89cc104842f046622 55 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 3 45 1.7E-5 T 22-04-2016 IPR008621 Cbb3-type cytochrome oxidase component PNUC_RS04555 d0fe64ec606a53594fba0e18b48e1f50 59 Gene3D G3DSA:1.10.10.10 10 45 1.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PNUC_RS04270 adc9c204033faf24c9081a4519c45215 59 Pfam PF06945 Protein of unknown function (DUF1289) 1 42 1.8E-13 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 PNUC_RS05570 1dbc4fa41d81bc3b5358ab9106e6d008 178 Pfam PF06271 RDD family 12 164 4.2E-12 T 22-04-2016 IPR010432 RDD PNUC_RS10540 be1907bcab2a0f40258e4f435ede4ad1 77 Pfam PF11391 Protein of unknown function (DUF2798) 11 68 5.9E-17 T 22-04-2016 IPR021529 Protein of unknown function DUF2798 PNUC_RS06980 da561b41c9fd993b106eae8c6c152ad5 494 Pfam PF04966 Carbohydrate-selective porin, OprB family 120 493 1.0E-41 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PNUC_RS02350 4cffeaf1bcf2251b02f13fd54a32c459 251 Pfam PF10014 2OG-Fe dioxygenase 49 236 2.8E-66 T 22-04-2016 IPR018724 2OG-Fe dioxygenase PNUC_RS09455 3b5e4deab48adcf5e6bddbaefd52b99f 206 Pfam PF11161 Protein of unknown function (DUF2946) 1 202 3.9E-68 T 22-04-2016 IPR021332 Protein of unknown function DUF2944 PNUC_RS05815 98bbb9da8bfe86ecf5fdb41660216771 806 Pfam PF05359 Domain of Unknown Function (DUF748) 416 553 2.8E-29 T 22-04-2016 IPR008023 Protein of unknown function DUF748 PNUC_RS03035 162a83002916b14117005a962f6a01a8 222 Pfam PF07813 LTXXQ motif family protein 83 176 3.2E-9 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 PNUC_RS07975 00b48400f5c45ed6069e060bbbf3390a 145 Pfam PF10504 Protein of unknown function (DUF2452) 29 138 1.8E-9 T 22-04-2016 IPR019534 Protein of unknown function DUF2452 PNUC_RS10560 f99ea9446df5a9b4d977c7c7028916f4 256 Pfam PF06629 MltA-interacting protein MipA 39 255 1.5E-28 T 22-04-2016 IPR010583 MltA-interacting MipA PNUC_RS09120 e40cb3112e1e664ba06e5e2d7d579bbf 100 Pfam PF12112 Protein of unknown function (DUF3579) 3 92 1.2E-36 T 22-04-2016 IPR021969 Protein of unknown function DUF3579 PNUC_RS06595 a106dabc1a092166482cb9781df3e5bf 289 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 19 222 7.8E-19 T 22-04-2016 PNUC_RS05560 7f1e49b458890b940373d2cdc6bbef3f 155 Pfam PF12279 Protein of unknown function (DUF3619) 13 135 3.2E-40 T 22-04-2016 IPR022064 Protein of unknown function DUF3619 PNUC_RS04415 6b766bfa5696d5d1391a4a9824714245 381 Pfam PF06804 NlpB/DapX lipoprotein 46 364 1.7E-45 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein PNUC_RS01845 8e3540a9551d8d9d63e4f0b0043ffced 362 Pfam PF01757 Acyltransferase family 10 345 8.3E-22 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 PNUC_RS03040 be463dd6b791e231b85266f665873c1d 146 Pfam PF11304 Protein of unknown function (DUF3106) 37 139 2.4E-17 T 22-04-2016 IPR021455 Protein of unknown function DUF3106 PNUC_RS05670 662353ea67618942982383a0929e6273 406 Pfam PF01734 Patatin-like phospholipase 79 264 5.2E-13 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PNUC_RS05670 662353ea67618942982383a0929e6273 406 Gene3D G3DSA:3.40.1090.10 77 264 9.6E-13 T 22-04-2016 PNUC_RS05670 662353ea67618942982383a0929e6273 406 SUPERFAMILY SSF52151 77 382 4.01E-32 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PNUC_RS03730 12accd7dfca30a49e8a29cf2a71a6e2b 73 Gene3D G3DSA:2.30.30.320 16 61 2.2E-4 T 22-04-2016 IPR023387 DUF1653-like domain PNUC_RS10755 1ccecf2c8749a7e2605b80c7fb136b60 193 Pfam PF14334 Domain of unknown function (DUF4390) 25 181 1.9E-57 T 22-04-2016 IPR025500 Protein of unknown function DUF4390 PNUC_RS04510 3efe9edde54364b15e5fa2493552e007 117 Pfam PF13356 Domain of unknown function (DUF4102) 19 106 8.7E-10 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 PNUC_RS08590 29db3b970fb1cba9b031f20458e965f3 125 Pfam PF13664 Domain of unknown function (DUF4149) 7 95 6.2E-13 T 22-04-2016 IPR025423 Domain of unknown function DUF4149 PNUC_RS06335 65cc16e8269538d589f09b0cfd332d68 487 Pfam PF08811 Protein of unknown function (DUF1800) 53 473 4.0E-81 T 22-04-2016 IPR014917 Protein of unknown function DUF1800 PNUC_RS06655 489b4c2c287324bd19e2c24a97ae4d8d 61 Pfam PF11127 Protein of unknown function (DUF2892) 1 60 1.3E-20 T 22-04-2016 IPR021309 Protein of unknown function DUF2892