locus-tag class description PGJ_RS00005 PF11638 DnaA N-terminal domain PGJ_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix PGJ_RS00005 PF00308 Bacterial dnaA protein PGJ_RS00010 PF00132 Bacterial transferase hexapeptide (six repeats) PGJ_RS00020 PF02146 Sir2 family PGJ_RS00025 PF00149 Calcineurin-like phosphoesterase PGJ_RS00045 PF17871 AAA lid domain PGJ_RS00045 PF10431 C-terminal, D2-small domain, of ClpB protein PGJ_RS00045 PF02861 Clp amino terminal domain, pathogenicity island component PGJ_RS00045 PF07724 AAA domain (Cdc48 subfamily) PGJ_RS00045 PF00004 ATPase family associated with various cellular activities (AAA) PGJ_RS00050 PF01915 Glycosyl hydrolase family 3 C-terminal domain PGJ_RS00050 PF00933 Glycosyl hydrolase family 3 N terminal domain PGJ_RS00055 PF00155 Aminotransferase class I and II PGJ_RS00060 PF04029 2-phosphosulpholactate phosphatase PGJ_RS00065 PF02954 Bacterial regulatory protein, Fis family PGJ_RS00065 PF00158 Sigma-54 interaction domain PGJ_RS00065 PF00072 Response regulator receiver domain PGJ_RS00070 PF13493 Domain of unknown function (DUF4118) PGJ_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGJ_RS00070 PF13426 PAS domain PGJ_RS00070 PF08447 PAS fold PGJ_RS00070 PF00512 His Kinase A (phospho-acceptor) domain PGJ_RS00070 PF00989 PAS fold PGJ_RS00085 PF01207 Dihydrouridine synthase (Dus) PGJ_RS00090 PF01740 STAS domain PGJ_RS00090 PF00916 Sulfate permease family PGJ_RS00095 PF06971 Putative DNA-binding protein N-terminus PGJ_RS00095 PF02629 CoA binding domain PGJ_RS00100 PF01557 Fumarylacetoacetate (FAA) hydrolase family PGJ_RS00115 PF02542 YgbB family PGJ_RS00120 PF08032 RNA 2'-O ribose methyltransferase substrate binding PGJ_RS00120 PF00588 SpoU rRNA Methylase family PGJ_RS00130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PGJ_RS00150 PF02646 RmuC family PGJ_RS00155 PF00085 Thioredoxin PGJ_RS00160 PF02811 PHP domain PGJ_RS00160 PF01336 OB-fold nucleic acid binding domain PGJ_RS00160 PF14579 Helix-hairpin-helix motif PGJ_RS00160 PF07733 Bacterial DNA polymerase III alpha NTPase domain PGJ_RS00160 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PGJ_RS00165 PF01245 Ribosomal protein L19 PGJ_RS00180 PF00464 Serine hydroxymethyltransferase PGJ_RS00185 PF00728 Glycosyl hydrolase family 20, catalytic domain PGJ_RS00185 PF02838 Glycosyl hydrolase family 20, domain 2 PGJ_RS00185 PF07691 PA14 domain PGJ_RS00190 PF00183 Hsp90 protein PGJ_RS00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGJ_RS00200 PF00004 ATPase family associated with various cellular activities (AAA) PGJ_RS00200 PF01434 Peptidase family M41 PGJ_RS00200 PF17862 AAA+ lid domain PGJ_RS00205 PF01926 50S ribosome-binding GTPase PGJ_RS00205 PF06071 Protein of unknown function (DUF933) PGJ_RS00210 PF01609 Transposase DDE domain PGJ_RS00220 PF00512 His Kinase A (phospho-acceptor) domain PGJ_RS00220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGJ_RS00220 PF00989 PAS fold PGJ_RS00225 PF10141 Single-strand DNA-specific exonuclease, C terminal domain PGJ_RS00225 PF17768 RecJ OB domain PGJ_RS00225 PF02272 DHHA1 domain PGJ_RS00225 PF01368 DHH family PGJ_RS00240 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PGJ_RS00240 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PGJ_RS00245 PF01467 Cytidylyltransferase-like PGJ_RS00260 PF02638 Glycosyl hydrolase-like 10 PGJ_RS00265 PF05970 PIF1-like helicase PGJ_RS00275 PF00873 AcrB/AcrD/AcrF family PGJ_RS00290 PF01256 Carbohydrate kinase PGJ_RS00290 PF03853 YjeF-related protein N-terminus PGJ_RS00295 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PGJ_RS00295 PF00132 Bacterial transferase hexapeptide (six repeats) PGJ_RS00300 PF07977 FabA-like domain PGJ_RS00300 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PGJ_RS00305 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PGJ_RS00305 PF00132 Bacterial transferase hexapeptide (six repeats) PGJ_RS00310 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PGJ_RS00315 PF00472 RF-1 domain PGJ_RS00315 PF03462 PCRF domain PGJ_RS00320 PF00586 AIR synthase related protein, N-terminal domain PGJ_RS00320 PF02769 AIR synthase related protein, C-terminal domain PGJ_RS00325 PF01476 LysM domain PGJ_RS00325 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PGJ_RS00340 PF13276 HTH-like domain PGJ_RS00340 PF00665 Integrase core domain PGJ_RS00340 PF13333 Integrase core domain PGJ_RS00360 PF03313 Serine dehydratase alpha chain PGJ_RS00360 PF03315 Serine dehydratase beta chain PGJ_RS00370 PF00270 DEAD/DEAH box helicase PGJ_RS00370 PF00271 Helicase conserved C-terminal domain PGJ_RS00375 PF00571 CBS domain PGJ_RS00375 PF01380 SIS domain PGJ_RS00390 PF00210 Ferritin-like domain PGJ_RS00420 PF01624 MutS domain I PGJ_RS00420 PF05188 MutS domain II PGJ_RS00420 PF05192 MutS domain III PGJ_RS00420 PF05190 MutS family domain IV PGJ_RS00420 PF00488 MutS domain V PGJ_RS00425 PF01709 Transcriptional regulator PGJ_RS00430 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PGJ_RS00430 PF03147 Ferredoxin-fold anticodon binding domain PGJ_RS00430 PF03484 tRNA synthetase B5 domain PGJ_RS00430 PF03483 B3/4 domain PGJ_RS00430 PF01588 Putative tRNA binding domain PGJ_RS00435 PF13333 Integrase core domain PGJ_RS00435 PF13276 HTH-like domain PGJ_RS00435 PF00665 Integrase core domain PGJ_RS00480 PF01131 DNA topoisomerase PGJ_RS00480 PF01751 Toprim domain PGJ_RS00490 PF00953 Glycosyl transferase family 4 PGJ_RS00495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PGJ_RS00495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PGJ_RS00495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PGJ_RS00500 PF00535 Glycosyl transferase family 2 PGJ_RS00510 PF00534 Glycosyl transferases group 1 PGJ_RS00510 PF13439 Glycosyltransferase Family 4 PGJ_RS00530 PF00132 Bacterial transferase hexapeptide (six repeats) PGJ_RS00530 PF06426 Serine acetyltransferase, N-terminal PGJ_RS00540 PF00535 Glycosyl transferase family 2 PGJ_RS00545 PF03808 Glycosyl transferase WecB/TagA/CpsF family PGJ_RS00550 PF02350 UDP-N-acetylglucosamine 2-epimerase PGJ_RS00560 PF00216 Bacterial DNA-binding protein PGJ_RS00570 PF09186 Domain of unknown function (DUF1949) PGJ_RS00570 PF01205 Uncharacterized protein family UPF0029 PGJ_RS00585 PF00762 Ferrochelatase PGJ_RS00595 PF00534 Glycosyl transferases group 1 PGJ_RS00600 PF00300 Histidine phosphatase superfamily (branch 1) PGJ_RS00615 PF03448 MgtE intracellular N domain PGJ_RS00615 PF00571 CBS domain PGJ_RS00615 PF01769 Divalent cation transporter PGJ_RS00620 PF00398 Ribosomal RNA adenine dimethylase PGJ_RS00630 PF07687 Peptidase dimerisation domain PGJ_RS00630 PF01546 Peptidase family M20/M25/M40 PGJ_RS00635 PF00698 Acyl transferase domain PGJ_RS00640 PF05257 CHAP domain PGJ_RS00640 PF01476 LysM domain PGJ_RS00650 PF02195 ParB-like nuclease domain PGJ_RS00650 PF17762 HTH domain found in ParB protein PGJ_RS00655 PF13614 AAA domain PGJ_RS00665 PF04371 Porphyromonas-type peptidyl-arginine deiminase PGJ_RS00685 PF00158 Sigma-54 interaction domain PGJ_RS00685 PF02954 Bacterial regulatory protein, Fis family PGJ_RS00685 PF00072 Response regulator receiver domain PGJ_RS00695 PF04055 Radical SAM superfamily PGJ_RS00695 PF18693 TRAM domain PGJ_RS00695 PF00919 Uncharacterized protein family UPF0004 PGJ_RS00700 PF00448 SRP54-type protein, GTPase domain PGJ_RS00700 PF02881 SRP54-type protein, helical bundle domain PGJ_RS00705 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PGJ_RS00710 PF01336 OB-fold nucleic acid binding domain PGJ_RS00710 PF02938 GAD domain PGJ_RS00710 PF00152 tRNA synthetases class II (D, K and N) PGJ_RS00715 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PGJ_RS00715 PF01872 RibD C-terminal domain PGJ_RS00720 PF17827 PrmC N-terminal domain PGJ_RS00720 PF05175 Methyltransferase small domain PGJ_RS00725 PF02631 RecX family PGJ_RS00730 PF00156 Phosphoribosyl transferase domain PGJ_RS00735 PF01431 Peptidase family M13 PGJ_RS00735 PF05649 Peptidase family M13 PGJ_RS00745 PF04542 Sigma-70 region 2 PGJ_RS00745 PF08281 Sigma-70, region 4 PGJ_RS00750 PF00365 Phosphofructokinase PGJ_RS00760 PF01479 S4 domain PGJ_RS00765 PF01195 Peptidyl-tRNA hydrolase PGJ_RS00770 PF01386 Ribosomal L25p family PGJ_RS00770 PF14693 Ribosomal protein TL5, C-terminal domain PGJ_RS00775 PF09334 tRNA synthetases class I (M) PGJ_RS00775 PF01588 Putative tRNA binding domain PGJ_RS00795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PGJ_RS00795 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGJ_RS00805 PF13333 Integrase core domain PGJ_RS00805 PF13276 HTH-like domain PGJ_RS00805 PF00665 Integrase core domain PGJ_RS00820 PF15495 Major fimbrial subunit protein type IV, Fimbrillin, C-terminal PGJ_RS00825 PF08842 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 PGJ_RS00830 PF08842 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 PGJ_RS00835 PF06321 Major fimbrial subunit protein (FimA) PGJ_RS00840 PF13519 von Willebrand factor type A domain PGJ_RS00845 PF13519 von Willebrand factor type A domain PGJ_RS00855 PF07715 TonB-dependent Receptor Plug Domain PGJ_RS00855 PF00593 TonB dependent receptor PGJ_RS00875 PF01255 Putative undecaprenyl diphosphate synthase PGJ_RS00880 PF07244 Surface antigen variable number repeat PGJ_RS00880 PF01103 Surface antigen PGJ_RS00885 PF03938 Outer membrane protein (OmpH-like) PGJ_RS00895 PF02915 Rubrerythrin PGJ_RS00900 PF00675 Insulinase (Peptidase family M16) PGJ_RS00900 PF05193 Peptidase M16 inactive domain PGJ_RS00905 PF05656 Protein of unknown function (DUF805) PGJ_RS00910 PF01026 TatD related DNase PGJ_RS00915 PF00825 Ribonuclease P PGJ_RS00935 PF00009 Elongation factor Tu GTP binding domain PGJ_RS00935 PF16658 Class II release factor RF3, C-terminal domain PGJ_RS00935 PF03144 Elongation factor Tu domain 2 PGJ_RS00940 PF01226 Formate/nitrite transporter PGJ_RS00945 PF01888 CbiD PGJ_RS00950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PGJ_RS00965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PGJ_RS00970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PGJ_RS00970 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PGJ_RS01015 PF01914 MarC family integral membrane protein PGJ_RS01025 PF18073 Rubredoxin metal binding domain PGJ_RS01050 PF00923 Transaldolase/Fructose-6-phosphate aldolase PGJ_RS01055 PF07075 Protein of unknown function (DUF1343) PGJ_RS01060 PF01752 Collagenase PGJ_RS01060 PF08453 Peptidase family M9 N-terminal PGJ_RS01060 PF18496 Collagenase G catalytic helper subdomain PGJ_RS01075 PF13180 PDZ domain PGJ_RS01075 PF01471 Putative peptidoglycan binding domain PGJ_RS01075 PF03572 Peptidase family S41 PGJ_RS01085 PF03167 Uracil DNA glycosylase superfamily PGJ_RS01090 PF13419 Haloacid dehalogenase-like hydrolase PGJ_RS01100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PGJ_RS01135 PF02436 Conserved carboxylase domain PGJ_RS01135 PF00682 HMGL-like PGJ_RS01145 PF02576 RimP N-terminal domain PGJ_RS01150 PF00575 S1 RNA binding domain PGJ_RS01150 PF08529 NusA N-terminal domain PGJ_RS01150 PF13184 NusA-like KH domain PGJ_RS01155 PF04760 Translation initiation factor IF-2, N-terminal region PGJ_RS01155 PF11987 Translation-initiation factor 2 PGJ_RS01155 PF00009 Elongation factor Tu GTP binding domain PGJ_RS01165 PF01458 Uncharacterized protein family (UPF0051) PGJ_RS01170 PF00005 ABC transporter PGJ_RS01175 PF01458 Uncharacterized protein family (UPF0051) PGJ_RS01180 PF00579 tRNA synthetases class I (W and Y) PGJ_RS01190 PF00750 tRNA synthetases class I (R) PGJ_RS01190 PF05746 DALR anticodon binding domain PGJ_RS01190 PF03485 Arginyl tRNA synthetase N terminal domain PGJ_RS01200 PF03372 Endonuclease/Exonuclease/phosphatase family PGJ_RS01205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PGJ_RS01205 PF03466 LysR substrate binding domain PGJ_RS01210 PF00436 Single-strand binding protein family PGJ_RS01215 PF03471 Transporter associated domain PGJ_RS01215 PF01595 Cyclin M transmembrane N-terminal domain PGJ_RS01215 PF00571 CBS domain PGJ_RS01225 PF00085 Thioredoxin PGJ_RS01235 PF00485 Phosphoribulokinase / Uridine kinase family PGJ_RS01240 PF00793 DAHP synthetase I family PGJ_RS01245 PF10415 Fumarase C C-terminus PGJ_RS01245 PF00206 Lyase PGJ_RS01250 PF02541 Ppx/GppA phosphatase family PGJ_RS01260 PF00480 ROK family PGJ_RS01265 PF09297 NADH pyrophosphatase zinc ribbon domain PGJ_RS01265 PF00293 NUDIX domain PGJ_RS01280 PF02899 Phage integrase, N-terminal SAM-like domain PGJ_RS01280 PF00589 Phage integrase family PGJ_RS01285 PF01220 Dehydroquinase class II PGJ_RS01290 PF01596 O-methyltransferase PGJ_RS01295 PF08534 Redoxin PGJ_RS01300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PGJ_RS01315 PF00994 Probable molybdopterin binding domain PGJ_RS01315 PF18146 Damage-inducible protein CinA KH domain PGJ_RS01315 PF02464 Competence-damaged protein PGJ_RS01320 PF00814 Glycoprotease family PGJ_RS01330 PF01649 Ribosomal protein S20 PGJ_RS01340 PF17876 Cold shock domain PGJ_RS01340 PF08206 Ribonuclease B OB domain PGJ_RS01340 PF00575 S1 RNA binding domain PGJ_RS01340 PF00773 RNB domain PGJ_RS01350 PF00005 ABC transporter PGJ_RS01350 PF00664 ABC transporter transmembrane region PGJ_RS01360 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PGJ_RS01360 PF01243 Pyridoxamine 5'-phosphate oxidase PGJ_RS01380 PF00665 Integrase core domain PGJ_RS01380 PF13333 Integrase core domain PGJ_RS01380 PF13276 HTH-like domain PGJ_RS01390 PF00403 Heavy-metal-associated domain PGJ_RS01395 PF00403 Heavy-metal-associated domain PGJ_RS01400 PF01451 Low molecular weight phosphotyrosine protein phosphatase PGJ_RS01405 PF01554 MatE PGJ_RS01410 PF00578 AhpC/TSA family PGJ_RS01415 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PGJ_RS01415 PF17854 FtsK alpha domain PGJ_RS01415 PF09397 Ftsk gamma domain PGJ_RS01415 PF01580 FtsK/SpoIIIE family PGJ_RS01430 PF08544 GHMP kinases C terminal PGJ_RS01430 PF00288 GHMP kinases N terminal domain PGJ_RS01430 PF10509 Galactokinase galactose-binding signature PGJ_RS01435 PF01263 Aldose 1-epimerase PGJ_RS01470 PF00521 DNA gyrase/topoisomerase IV, subunit A PGJ_RS01490 PF04301 Protein of unknown function (DUF452) PGJ_RS01495 PF13396 Phospholipase_D-nuclease N-terminal PGJ_RS01495 PF13091 PLD-like domain PGJ_RS01500 PF04607 Region found in RelA / SpoT proteins PGJ_RS01500 PF13291 ACT domain PGJ_RS01500 PF02824 TGS domain PGJ_RS01515 PF03061 Thioesterase superfamily PGJ_RS01520 PF01427 D-ala-D-ala dipeptidase PGJ_RS01545 PF01642 Methylmalonyl-CoA mutase PGJ_RS01550 PF02310 B12 binding domain PGJ_RS01550 PF01642 Methylmalonyl-CoA mutase PGJ_RS01565 PF08281 Sigma-70, region 4 PGJ_RS01565 PF04542 Sigma-70 region 2 PGJ_RS01575 PF00005 ABC transporter PGJ_RS01580 PF12704 MacB-like periplasmic core domain PGJ_RS01580 PF02687 FtsX-like permease family PGJ_RS01580 PF00005 ABC transporter PGJ_RS01585 PF12704 MacB-like periplasmic core domain PGJ_RS01585 PF02687 FtsX-like permease family PGJ_RS01585 PF00005 ABC transporter PGJ_RS01595 PF02321 Outer membrane efflux protein PGJ_RS01640 PF01293 Phosphoenolpyruvate carboxykinase PGJ_RS01645 PF00162 Phosphoglycerate kinase PGJ_RS01655 PF00005 ABC transporter PGJ_RS01665 PF00534 Glycosyl transferases group 1 PGJ_RS01665 PF13579 Glycosyl transferase 4-like domain PGJ_RS01680 PF01230 HIT domain PGJ_RS01685 PF01272 Transcription elongation factor, GreA/GreB, C-term PGJ_RS01685 PF03449 Transcription elongation factor, N-terminal PGJ_RS01690 PF01300 Telomere recombination PGJ_RS01700 PF00005 ABC transporter PGJ_RS01705 PF00899 ThiF family PGJ_RS01710 PF02618 YceG-like family PGJ_RS01725 PF07722 Peptidase C26 PGJ_RS01730 PF00204 DNA gyrase B PGJ_RS01730 PF00986 DNA gyrase B subunit, carboxyl terminus PGJ_RS01730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGJ_RS01730 PF01751 Toprim domain PGJ_RS01735 PF03819 MazG nucleotide pyrophosphohydrolase domain PGJ_RS01735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PGJ_RS01745 PF01479 S4 domain PGJ_RS01745 PF00849 RNA pseudouridylate synthase PGJ_RS01765 PF00665 Integrase core domain PGJ_RS01765 PF13333 Integrase core domain PGJ_RS01765 PF13276 HTH-like domain PGJ_RS01780 PF00890 FAD binding domain PGJ_RS01780 PF02910 Fumarate reductase flavoprotein C-term PGJ_RS01795 PF01039 Carboxyl transferase domain PGJ_RS01810 PF00364 Biotin-requiring enzyme PGJ_RS01815 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit PGJ_RS01820 PF07885 Ion channel PGJ_RS01825 PF03051 Peptidase C1-like family PGJ_RS01835 PF01725 Ham1 family PGJ_RS01845 PF08279 HTH domain PGJ_RS01845 PF02237 Biotin protein ligase C terminal domain PGJ_RS01845 PF03099 Biotin/lipoate A/B protein ligase family PGJ_RS01860 PF01252 Signal peptidase (SPase) II PGJ_RS01865 PF01258 Prokaryotic dksA/traR C4-type zinc finger PGJ_RS01870 PF00133 tRNA synthetases class I (I, L, M and V) PGJ_RS01870 PF08264 Anticodon-binding domain of tRNA PGJ_RS01875 PF00834 Ribulose-phosphate 3 epimerase family PGJ_RS01885 PF01202 Shikimate kinase PGJ_RS01890 PF07698 7TM receptor with intracellular HD hydrolase PGJ_RS01890 PF01966 HD domain PGJ_RS01890 PF07697 7TM-HD extracellular PGJ_RS01900 PF00809 Pterin binding enzyme PGJ_RS01905 PF02457 DisA bacterial checkpoint controller nucleotide-binding PGJ_RS01910 PF01569 PAP2 superfamily PGJ_RS01935 PF00092 von Willebrand factor type A domain PGJ_RS01945 PF01882 Protein of unknown function DUF58 PGJ_RS01950 PF07726 ATPase family associated with various cellular activities (AAA) PGJ_RS01950 PF17863 AAA lid domain PGJ_RS01955 PF02445 Quinolinate synthetase A protein PGJ_RS01960 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PGJ_RS01960 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PGJ_RS01965 PF00890 FAD binding domain PGJ_RS01965 PF02910 Fumarate reductase flavoprotein C-term PGJ_RS01975 PF00665 Integrase core domain PGJ_RS01975 PF13333 Integrase core domain PGJ_RS01975 PF13276 HTH-like domain PGJ_RS01995 PF13749 Putative ATP-dependent DNA helicase recG C-terminal PGJ_RS01995 PF00270 DEAD/DEAH box helicase PGJ_RS01995 PF17191 RecG wedge domain PGJ_RS02025 PF13545 Crp-like helix-turn-helix domain PGJ_RS02025 PF00027 Cyclic nucleotide-binding domain PGJ_RS02030 PF01925 Sulfite exporter TauE/SafE PGJ_RS02035 PF16123 Hydroxyacylglutathione hydrolase C-terminus PGJ_RS02035 PF00753 Metallo-beta-lactamase superfamily PGJ_RS02050 PF00749 tRNA synthetases class I (E and Q), catalytic domain PGJ_RS02065 PF00483 Nucleotidyl transferase PGJ_RS02070 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PGJ_RS02075 PF04321 RmlD substrate binding domain PGJ_RS02080 PF16363 GDP-mannose 4,6 dehydratase PGJ_RS02085 PF08669 Glycine cleavage T-protein C-terminal barrel domain PGJ_RS02085 PF01571 Aminomethyltransferase folate-binding domain PGJ_RS02105 PF11965 Domain of unknown function (DUF3479) PGJ_RS02105 PF02514 CobN/Magnesium Chelatase PGJ_RS02110 PF00593 TonB dependent receptor PGJ_RS02110 PF07715 TonB-dependent Receptor Plug Domain PGJ_RS02120 PF13734 Spi protease inhibitor PGJ_RS02120 PF01640 Peptidase C10 family PGJ_RS02135 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PGJ_RS02135 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PGJ_RS02140 PF03883 Peroxide stress protein YaaA PGJ_RS02150 PF01136 Peptidase family U32 PGJ_RS02155 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PGJ_RS02160 PF02547 Queuosine biosynthesis protein PGJ_RS02165 PF01509 TruB family pseudouridylate synthase (N terminal domain) PGJ_RS02165 PF16198 tRNA pseudouridylate synthase B C-terminal domain PGJ_RS02170 PF02673 Bacitracin resistance protein BacA PGJ_RS02190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PGJ_RS02200 PF00672 HAMP domain PGJ_RS02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGJ_RS02200 PF00512 His Kinase A (phospho-acceptor) domain PGJ_RS02200 PF01627 Hpt domain PGJ_RS02200 PF00072 Response regulator receiver domain PGJ_RS02200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PGJ_RS02205 PF00072 Response regulator receiver domain PGJ_RS02205 PF00196 Bacterial regulatory proteins, luxR family PGJ_RS02215 PF00885 6,7-dimethyl-8-ribityllumazine synthase PGJ_RS02220 PF01640 Peptidase C10 family PGJ_RS02220 PF13734 Spi protease inhibitor PGJ_RS02230 PF04371 Porphyromonas-type peptidyl-arginine deiminase PGJ_RS02235 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PGJ_RS02240 PF13276 HTH-like domain PGJ_RS02240 PF00665 Integrase core domain PGJ_RS02240 PF13333 Integrase core domain PGJ_RS02250 PF12169 DNA polymerase III subunits gamma and tau domain III PGJ_RS02255 PF05681 Fumarate hydratase (Fumerase) PGJ_RS02255 PF05683 Fumarase C-terminus PGJ_RS02265 PF03060 Nitronate monooxygenase PGJ_RS02285 PF02080 TrkA-C domain PGJ_RS02285 PF06826 Predicted Permease Membrane Region PGJ_RS02295 PF01545 Cation efflux family PGJ_RS02325 PF01212 Beta-eliminating lyase PGJ_RS02330 PF01609 Transposase DDE domain PGJ_RS02335 PF02142 MGS-like domain PGJ_RS02335 PF01808 AICARFT/IMPCHase bienzyme PGJ_RS02355 PF03717 Penicillin-binding Protein dimerisation domain PGJ_RS02355 PF00905 Penicillin binding protein transpeptidase domain PGJ_RS02360 PF01098 Cell cycle protein PGJ_RS02385 PF03989 DNA gyrase C-terminal domain, beta-propeller PGJ_RS02385 PF00521 DNA gyrase/topoisomerase IV, subunit A PGJ_RS02415 PF00005 ABC transporter PGJ_RS02425 PF00730 HhH-GPD superfamily base excision DNA repair protein PGJ_RS02425 PF14815 NUDIX domain PGJ_RS02440 PF01048 Phosphorylase superfamily PGJ_RS02445 PF00152 tRNA synthetases class II (D, K and N) PGJ_RS02445 PF01336 OB-fold nucleic acid binding domain PGJ_RS02450 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PGJ_RS02450 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PGJ_RS02455 PF00342 Phosphoglucose isomerase PGJ_RS02465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PGJ_RS02470 PF01782 RimM N-terminal domain PGJ_RS02475 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PGJ_RS02475 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PGJ_RS02475 PF13288 DXP reductoisomerase C-terminal domain PGJ_RS02480 PF01170 Putative RNA methylase family UPF0020 PGJ_RS02480 PF02926 THUMP domain PGJ_RS02485 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region PGJ_RS02485 PF00326 Prolyl oligopeptidase family PGJ_RS02490 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PGJ_RS02490 PF02843 Phosphoribosylglycinamide synthetase, C domain PGJ_RS02490 PF02844 Phosphoribosylglycinamide synthetase, N domain PGJ_RS02500 PF13808 DDE_Tnp_1-associated PGJ_RS02500 PF01609 Transposase DDE domain PGJ_RS02505 PF13302 Acetyltransferase (GNAT) domain PGJ_RS02530 PF00795 Carbon-nitrogen hydrolase PGJ_RS02535 PF00156 Phosphoribosyl transferase domain PGJ_RS02550 PF00781 Diacylglycerol kinase catalytic domain PGJ_RS02555 PF14489 QueF-like protein PGJ_RS02560 PF00534 Glycosyl transferases group 1 PGJ_RS02560 PF13439 Glycosyltransferase Family 4 PGJ_RS02570 PF03099 Biotin/lipoate A/B protein ligase family PGJ_RS02570 PF12706 Beta-lactamase superfamily domain PGJ_RS02575 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PGJ_RS02575 PF01565 FAD binding domain PGJ_RS02585 PF02652 L-lactate permease PGJ_RS02590 PF00817 impB/mucB/samB family PGJ_RS02590 PF13438 Domain of unknown function (DUF4113) PGJ_RS02590 PF11798 IMS family HHH motif PGJ_RS02590 PF11799 impB/mucB/samB family C-terminal domain PGJ_RS02595 PF00717 Peptidase S24-like PGJ_RS02605 PF01145 SPFH domain / Band 7 family PGJ_RS02615 PF02233 NAD(P) transhydrogenase beta subunit PGJ_RS02620 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PGJ_RS02620 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PGJ_RS02620 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PGJ_RS02625 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PGJ_RS02625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PGJ_RS02630 PF01741 Large-conductance mechanosensitive channel, MscL PGJ_RS02635 PF13607 Succinyl-CoA ligase like flavodoxin domain PGJ_RS02635 PF13380 CoA binding domain PGJ_RS02640 PF00155 Aminotransferase class I and II PGJ_RS02645 PF10365 Domain of unknown function (DUF2436) PGJ_RS02645 PF08126 Propeptide_C25 PGJ_RS02645 PF07675 Cleaved Adhesin Domain PGJ_RS02645 PF07675 Cleaved Adhesin Domain PGJ_RS02645 PF10365 Domain of unknown function (DUF2436) PGJ_RS02645 PF01364 Peptidase family C25 PGJ_RS02645 PF03785 Peptidase family C25, C terminal ig-like domain PGJ_RS02645 PF08126 Propeptide_C25 PGJ_RS02645 PF03785 Peptidase family C25, C terminal ig-like domain PGJ_RS02645 PF01364 Peptidase family C25 PGJ_RS02655 PF02075 Crossover junction endodeoxyribonuclease RuvC PGJ_RS02660 PF02562 PhoH-like protein PGJ_RS02660 PF13638 PIN domain PGJ_RS02665 PF01268 Formate--tetrahydrofolate ligase PGJ_RS02675 PF08281 Sigma-70, region 4 PGJ_RS02675 PF04542 Sigma-70 region 2 PGJ_RS02690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PGJ_RS02695 PF01264 Chorismate synthase PGJ_RS02700 PF13808 DDE_Tnp_1-associated PGJ_RS02700 PF01609 Transposase DDE domain PGJ_RS02710 PF03577 Peptidase family C69 PGJ_RS02725 PF06508 Queuosine biosynthesis protein QueC PGJ_RS02735 PF02527 rRNA small subunit methyltransferase G PGJ_RS02740 PF00753 Metallo-beta-lactamase superfamily PGJ_RS02745 PF02347 Glycine cleavage system P-protein PGJ_RS02775 PF00575 S1 RNA binding domain PGJ_RS02790 PF07664 Ferrous iron transport protein B C terminus PGJ_RS02790 PF17910 FeoB cytosolic helical domain PGJ_RS02790 PF02421 Ferrous iron transport protein B PGJ_RS02790 PF07670 Nucleoside recognition PGJ_RS02790 PF04023 FeoA domain PGJ_RS02805 PF01063 Amino-transferase class IV PGJ_RS02810 PF01370 NAD dependent epimerase/dehydratase family PGJ_RS02815 PF16363 GDP-mannose 4,6 dehydratase PGJ_RS02820 PF00210 Ferritin-like domain PGJ_RS02825 PF02585 GlcNAc-PI de-N-acetylase PGJ_RS02825 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PGJ_RS02830 PF10459 Peptidase S46 PGJ_RS02840 PF00488 MutS domain V PGJ_RS02840 PF01713 Smr domain PGJ_RS02850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PGJ_RS02850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PGJ_RS02850 PF01842 ACT domain PGJ_RS02855 PF00266 Aminotransferase class-V PGJ_RS02860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PGJ_RS02860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PGJ_RS02860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PGJ_RS02870 PF08207 Elongation factor P (EF-P) KOW-like domain PGJ_RS02870 PF09285 Elongation factor P, C-terminal PGJ_RS02870 PF01132 Elongation factor P (EF-P) OB domain PGJ_RS02875 PF00202 Aminotransferase class-III PGJ_RS02885 PF00171 Aldehyde dehydrogenase family PGJ_RS02925 PF01609 Transposase DDE domain PGJ_RS02935 PF03477 ATP cone domain PGJ_RS02935 PF13597 Anaerobic ribonucleoside-triphosphate reductase PGJ_RS02945 PF00216 Bacterial DNA-binding protein PGJ_RS02950 PF00575 S1 RNA binding domain PGJ_RS02950 PF10150 Ribonuclease E/G family PGJ_RS02955 PF02132 RecR protein PGJ_RS02955 PF13662 Toprim domain PGJ_RS02965 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PGJ_RS02965 PF00533 BRCA1 C Terminus (BRCT) domain PGJ_RS02965 PF03120 NAD-dependent DNA ligase OB-fold domain PGJ_RS02965 PF12826 Helix-hairpin-helix motif PGJ_RS02965 PF01653 NAD-dependent DNA ligase adenylation domain PGJ_RS02970 PF02687 FtsX-like permease family PGJ_RS02970 PF12704 MacB-like periplasmic core domain PGJ_RS02980 PF01553 Acyltransferase PGJ_RS02995 PF01761 3-dehydroquinate synthase PGJ_RS03000 PF01411 tRNA synthetases class II (A) PGJ_RS03000 PF02272 DHHA1 domain PGJ_RS03000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PGJ_RS03015 PF00772 DnaB-like helicase N terminal domain PGJ_RS03015 PF03796 DnaB-like helicase C terminal domain PGJ_RS03020 PF03144 Elongation factor Tu domain 2 PGJ_RS03020 PF06421 GTP-binding protein LepA C-terminus PGJ_RS03020 PF00009 Elongation factor Tu GTP binding domain PGJ_RS03020 PF00679 Elongation factor G C-terminus PGJ_RS03030 PF00440 Bacterial regulatory proteins, tetR family PGJ_RS03030 PF08361 MAATS-type transcriptional repressor, C-terminal region PGJ_RS03040 PF00849 RNA pseudouridylate synthase PGJ_RS03040 PF01479 S4 domain PGJ_RS03045 PF00196 Bacterial regulatory proteins, luxR family PGJ_RS03045 PF00072 Response regulator receiver domain PGJ_RS03055 PF01370 NAD dependent epimerase/dehydratase family PGJ_RS03060 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PGJ_RS03060 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PGJ_RS03065 PF01609 Transposase DDE domain PGJ_RS03065 PF13808 DDE_Tnp_1-associated PGJ_RS03085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PGJ_RS03090 PF16326 ABC transporter C-terminal domain PGJ_RS03090 PF00005 ABC transporter PGJ_RS03090 PF12848 ABC transporter PGJ_RS03095 PF01464 Transglycosylase SLT domain PGJ_RS03095 PF00497 Bacterial extracellular solute-binding proteins, family 3 PGJ_RS03105 PF00106 short chain dehydrogenase PGJ_RS03110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PGJ_RS03110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PGJ_RS03140 PF01693 Caulimovirus viroplasmin PGJ_RS03150 PF00132 Bacterial transferase hexapeptide (six repeats) PGJ_RS03155 PF00557 Metallopeptidase family M24 PGJ_RS03155 PF01321 Creatinase/Prolidase N-terminal domain PGJ_RS03195 PF02653 Branched-chain amino acid transport system / permease component PGJ_RS03200 PF02653 Branched-chain amino acid transport system / permease component PGJ_RS03220 PF00005 ABC transporter PGJ_RS03225 PF00005 ABC transporter PGJ_RS03230 PF00589 Phage integrase family PGJ_RS03230 PF02899 Phage integrase, N-terminal SAM-like domain PGJ_RS03235 PF00589 Phage integrase family PGJ_RS03235 PF02899 Phage integrase, N-terminal SAM-like domain PGJ_RS03250 PF00144 Beta-lactamase PGJ_RS03260 PF00672 HAMP domain PGJ_RS03260 PF02743 Cache domain PGJ_RS03260 PF06580 Histidine kinase PGJ_RS03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGJ_RS03265 PF00072 Response regulator receiver domain PGJ_RS03265 PF04397 LytTr DNA-binding domain PGJ_RS03300 PF06114 IrrE N-terminal-like domain PGJ_RS03315 PF02899 Phage integrase, N-terminal SAM-like domain PGJ_RS03315 PF00589 Phage integrase family PGJ_RS03320 PF00012 Hsp70 protein PGJ_RS03330 PF00589 Phage integrase family PGJ_RS03330 PF02899 Phage integrase, N-terminal SAM-like domain PGJ_RS03375 PF02661 Fic/DOC family PGJ_RS03395 PF00155 Aminotransferase class I and II PGJ_RS03400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PGJ_RS03400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PGJ_RS03430 PF03062 MBOAT, membrane-bound O-acyltransferase family PGJ_RS03455 PF08021 Siderophore-interacting FAD-binding domain PGJ_RS03455 PF04954 Siderophore-interacting protein PGJ_RS03455 PF00664 ABC transporter transmembrane region PGJ_RS03455 PF00005 ABC transporter PGJ_RS03460 PF00664 ABC transporter transmembrane region PGJ_RS03460 PF00005 ABC transporter PGJ_RS03480 PF13180 PDZ domain PGJ_RS03480 PF03572 Peptidase family S41 PGJ_RS03490 PF01609 Transposase DDE domain PGJ_RS03490 PF13808 DDE_Tnp_1-associated PGJ_RS03500 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B PGJ_RS03505 PF01180 Dihydroorotate dehydrogenase PGJ_RS03510 PF01144 Coenzyme A transferase PGJ_RS03515 PF03061 Thioesterase superfamily PGJ_RS03520 PF05853 beta-keto acid cleavage enzyme PGJ_RS03530 PF12544 Lysine-2,3-aminomutase PGJ_RS03530 PF04055 Radical SAM superfamily PGJ_RS03540 PF00488 MutS domain V PGJ_RS03540 PF05188 MutS domain II PGJ_RS03540 PF01624 MutS domain I PGJ_RS03540 PF05190 MutS family domain IV PGJ_RS03540 PF05192 MutS domain III PGJ_RS03545 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit PGJ_RS03550 PF02310 B12 binding domain PGJ_RS03550 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase PGJ_RS03555 PF01144 Coenzyme A transferase PGJ_RS03560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PGJ_RS03560 PF02770 Acyl-CoA dehydrogenase, middle domain PGJ_RS03560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PGJ_RS03565 PF01012 Electron transfer flavoprotein domain PGJ_RS03570 PF00766 Electron transfer flavoprotein FAD-binding domain PGJ_RS03570 PF01012 Electron transfer flavoprotein domain PGJ_RS03575 PF00378 Enoyl-CoA hydratase/isomerase PGJ_RS03580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PGJ_RS03580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PGJ_RS03585 PF00871 Acetokinase family PGJ_RS03590 PF01515 Phosphate acetyl/butaryl transferase PGJ_RS03600 PF00578 AhpC/TSA family PGJ_RS03610 PF16199 Radical_SAM C-terminal domain PGJ_RS03610 PF04055 Radical SAM superfamily PGJ_RS03620 PF00486 Transcriptional regulatory protein, C terminal PGJ_RS03620 PF00072 Response regulator receiver domain PGJ_RS03635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGJ_RS03635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGJ_RS03635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGJ_RS03635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGJ_RS03640 PF05958 tRNA (Uracil-5-)-methyltransferase PGJ_RS03640 PF01938 TRAM domain PGJ_RS03650 PF01168 Alanine racemase, N-terminal domain PGJ_RS03650 PF00842 Alanine racemase, C-terminal domain PGJ_RS03670 PF01380 SIS domain PGJ_RS03680 PF00474 Sodium:solute symporter family PGJ_RS03690 PF12002 MgsA AAA+ ATPase C terminal PGJ_RS03690 PF16193 AAA C-terminal domain PGJ_RS03690 PF00004 ATPase family associated with various cellular activities (AAA) PGJ_RS03695 PF05175 Methyltransferase small domain PGJ_RS03700 PF04963 Sigma-54 factor, core binding domain PGJ_RS03700 PF00309 Sigma-54 factor, Activator interacting domain (AID) PGJ_RS03700 PF04552 Sigma-54, DNA binding domain PGJ_RS03705 PF08245 Mur ligase middle domain PGJ_RS03705 PF01225 Mur ligase family, catalytic domain PGJ_RS03705 PF02875 Mur ligase family, glutamate ligase domain PGJ_RS03710 PF02261 Aspartate decarboxylase PGJ_RS03715 PF02881 SRP54-type protein, helical bundle domain PGJ_RS03715 PF00448 SRP54-type protein, GTPase domain PGJ_RS03715 PF02978 Signal peptide binding domain PGJ_RS03720 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PGJ_RS03720 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PGJ_RS03725 PF01554 MatE PGJ_RS03730 PF17871 AAA lid domain PGJ_RS03730 PF10431 C-terminal, D2-small domain, of ClpB protein PGJ_RS03730 PF07724 AAA domain (Cdc48 subfamily) PGJ_RS03730 PF00004 ATPase family associated with various cellular activities (AAA) PGJ_RS03730 PF02861 Clp amino terminal domain, pathogenicity island component PGJ_RS03740 PF00152 tRNA synthetases class II (D, K and N) PGJ_RS03740 PF01336 OB-fold nucleic acid binding domain PGJ_RS03745 PF00849 RNA pseudouridylate synthase PGJ_RS03745 PF01479 S4 domain PGJ_RS03750 PF00206 Lyase PGJ_RS03750 PF08328 Adenylosuccinate lyase C-terminal PGJ_RS03755 PF01923 Cobalamin adenosyltransferase PGJ_RS03765 PF00860 Permease family PGJ_RS03770 PF01037 Lrp/AsnC ligand binding domain PGJ_RS03770 PF13404 AsnC-type helix-turn-helix domain PGJ_RS03775 PF13742 OB-fold nucleic acid binding domain PGJ_RS03775 PF02601 Exonuclease VII, large subunit PGJ_RS03780 PF00317 Ribonucleotide reductase, all-alpha domain PGJ_RS03780 PF02867 Ribonucleotide reductase, barrel domain PGJ_RS03780 PF03477 ATP cone domain PGJ_RS03790 PF08264 Anticodon-binding domain of tRNA PGJ_RS03790 PF10458 Valyl tRNA synthetase tRNA binding arm PGJ_RS03790 PF00133 tRNA synthetases class I (I, L, M and V) PGJ_RS03805 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGJ_RS03810 PF02397 Bacterial sugar transferase PGJ_RS03825 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PGJ_RS03840 PF13439 Glycosyltransferase Family 4 PGJ_RS03840 PF00534 Glycosyl transferases group 1 PGJ_RS03855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PGJ_RS03855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PGJ_RS03855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PGJ_RS03860 PF03462 PCRF domain PGJ_RS03860 PF00472 RF-1 domain PGJ_RS03865 PF00501 AMP-binding enzyme PGJ_RS03875 PF00534 Glycosyl transferases group 1 PGJ_RS03885 PF00465 Iron-containing alcohol dehydrogenase PGJ_RS03905 PF00849 RNA pseudouridylate synthase PGJ_RS03905 PF01479 S4 domain PGJ_RS03915 PF03186 CobD/Cbib protein PGJ_RS03920 PF00155 Aminotransferase class I and II PGJ_RS03925 PF07685 CobB/CobQ-like glutamine amidotransferase domain PGJ_RS03925 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PGJ_RS03930 PF01923 Cobalamin adenosyltransferase PGJ_RS03935 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PGJ_RS03935 PF07685 CobB/CobQ-like glutamine amidotransferase domain PGJ_RS03975 PF02754 Cysteine-rich domain PGJ_RS03980 PF02589 LUD domain PGJ_RS03980 PF11870 Domain of unknown function (DUF3390) PGJ_RS03980 PF13183 4Fe-4S dicluster domain PGJ_RS03985 PF02589 LUD domain PGJ_RS03995 PF01389 OmpA-like transmembrane domain PGJ_RS03995 PF00691 OmpA family PGJ_RS04000 PF04055 Radical SAM superfamily PGJ_RS04005 PF01242 6-pyruvoyl tetrahydropterin synthase PGJ_RS04010 PF00648 Calpain family cysteine protease PGJ_RS04015 PF13545 Crp-like helix-turn-helix domain PGJ_RS04015 PF00027 Cyclic nucleotide-binding domain PGJ_RS04020 PF13411 MerR HTH family regulatory protein PGJ_RS04040 PF01520 N-acetylmuramoyl-L-alanine amidase PGJ_RS04050 PF13808 DDE_Tnp_1-associated PGJ_RS04050 PF01609 Transposase DDE domain PGJ_RS04060 PF02421 Ferrous iron transport protein B PGJ_RS04060 PF07670 Nucleoside recognition PGJ_RS04060 PF07664 Ferrous iron transport protein B C terminus PGJ_RS04060 PF17910 FeoB cytosolic helical domain PGJ_RS04070 PF01699 Sodium/calcium exchanger protein PGJ_RS04075 PF01316 Arginine repressor, DNA binding domain PGJ_RS04075 PF02863 Arginine repressor, C-terminal domain PGJ_RS04080 PF00884 Sulfatase PGJ_RS04085 PF13361 UvrD-like helicase C-terminal domain PGJ_RS04085 PF00580 UvrD/REP helicase N-terminal domain PGJ_RS04095 PF17760 UvrA interaction domain PGJ_RS04095 PF00005 ABC transporter PGJ_RS04095 PF17755 UvrA DNA-binding domain PGJ_RS04105 PF00005 ABC transporter PGJ_RS04110 PF02405 Permease MlaE PGJ_RS04125 PF00425 chorismate binding enzyme PGJ_RS04130 PF01063 Amino-transferase class IV PGJ_RS04155 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PGJ_RS04155 PF02896 PEP-utilising enzyme, TIM barrel domain PGJ_RS04155 PF00391 PEP-utilising enzyme, mobile domain PGJ_RS04165 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PGJ_RS04165 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PGJ_RS04170 PF04055 Radical SAM superfamily PGJ_RS04170 PF01938 TRAM domain PGJ_RS04170 PF00919 Uncharacterized protein family UPF0004 PGJ_RS04175 PF00005 ABC transporter PGJ_RS04190 PF00392 Bacterial regulatory proteins, gntR family PGJ_RS04205 PF00326 Prolyl oligopeptidase family PGJ_RS04250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PGJ_RS04250 PF03129 Anticodon binding domain PGJ_RS04250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PGJ_RS04250 PF02824 TGS domain PGJ_RS04255 PF00707 Translation initiation factor IF-3, C-terminal domain PGJ_RS04255 PF05198 Translation initiation factor IF-3, N-terminal domain PGJ_RS04260 PF01632 Ribosomal protein L35 PGJ_RS04265 PF00453 Ribosomal protein L20 PGJ_RS04300 PF17243 POTRA domain TamA domain 1 PGJ_RS04300 PF07244 Surface antigen variable number repeat PGJ_RS04300 PF01103 Surface antigen PGJ_RS04305 PF08501 Shikimate dehydrogenase substrate binding domain PGJ_RS04305 PF01488 Shikimate / quinate 5-dehydrogenase PGJ_RS04305 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PGJ_RS04310 PF01209 ubiE/COQ5 methyltransferase family PGJ_RS04315 PF01259 SAICAR synthetase PGJ_RS04320 PF02562 PhoH-like protein PGJ_RS04330 PF02547 Queuosine biosynthesis protein PGJ_RS04355 PF02666 Phosphatidylserine decarboxylase PGJ_RS04360 PF01066 CDP-alcohol phosphatidyltransferase PGJ_RS04370 PF03129 Anticodon binding domain PGJ_RS04370 PF09180 Prolyl-tRNA synthetase, C-terminal PGJ_RS04370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PGJ_RS04380 PF02390 Putative methyltransferase PGJ_RS04385 PF10609 NUBPL iron-transfer P-loop NTPase PGJ_RS04385 PF01883 Iron-sulfur cluster assembly protein PGJ_RS04390 PF03631 Virulence factor BrkB PGJ_RS04395 PF06574 FAD synthetase PGJ_RS04395 PF01687 Riboflavin kinase PGJ_RS04415 PF00692 dUTPase PGJ_RS04420 PF04551 GcpE protein PGJ_RS04425 PF00731 AIR carboxylase PGJ_RS04430 PF01597 Glycine cleavage H-protein PGJ_RS04450 PF00005 ABC transporter PGJ_RS04450 PF13732 Domain of unknown function (DUF4162) PGJ_RS04465 PF00689 Cation transporting ATPase, C-terminus PGJ_RS04465 PF00690 Cation transporter/ATPase, N-terminus PGJ_RS04475 PF00860 Permease family PGJ_RS04480 PF00288 GHMP kinases N terminal domain PGJ_RS04480 PF08544 GHMP kinases C terminal PGJ_RS04485 PF11842 Domain of unknown function (DUF3362) PGJ_RS04485 PF04055 Radical SAM superfamily PGJ_RS04485 PF08497 Radical SAM N-terminal PGJ_RS04490 PF00009 Elongation factor Tu GTP binding domain PGJ_RS04490 PF03764 Elongation factor G, domain IV PGJ_RS04490 PF14492 Elongation Factor G, domain II PGJ_RS04490 PF00679 Elongation factor G C-terminus PGJ_RS04515 PF00158 Sigma-54 interaction domain PGJ_RS04515 PF00072 Response regulator receiver domain PGJ_RS04515 PF02954 Bacterial regulatory protein, Fis family PGJ_RS04520 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PGJ_RS04530 PF00265 Thymidine kinase PGJ_RS04535 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) PGJ_RS04540 PF02033 Ribosome-binding factor A PGJ_RS04545 PF12704 MacB-like periplasmic core domain PGJ_RS04545 PF02687 FtsX-like permease family PGJ_RS04550 PF00535 Glycosyl transferase family 2 PGJ_RS04555 PF01979 Amidohydrolase family PGJ_RS04565 PF04138 GtrA-like protein PGJ_RS04595 PF03313 Serine dehydratase alpha chain PGJ_RS04630 PF02463 RecF/RecN/SMC N terminal domain PGJ_RS04640 PF07971 Glycosyl hydrolase family 92 PGJ_RS04640 PF17678 Glycosyl hydrolase family 92 N-terminal domain PGJ_RS04650 PF01654 Cytochrome bd terminal oxidase subunit I PGJ_RS04655 PF02322 Cytochrome bd terminal oxidase subunit II PGJ_RS04660 PF01734 Patatin-like phospholipase PGJ_RS04665 PF00128 Alpha amylase, catalytic domain PGJ_RS04665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PGJ_RS04665 PF02806 Alpha amylase, C-terminal all-beta domain PGJ_RS04670 PF02837 Glycosyl hydrolases family 2, sugar binding domain PGJ_RS04670 PF02836 Glycosyl hydrolases family 2, TIM barrel domain PGJ_RS04670 PF00703 Glycosyl hydrolases family 2 PGJ_RS04670 PF02929 Beta galactosidase small chain PGJ_RS04670 PF16353 Domain of unknown function(DUF4981) PGJ_RS04680 PF04002 RadC-like JAB domain PGJ_RS04685 PF03063 Prismane/CO dehydrogenase family PGJ_RS04690 PF00245 Alkaline phosphatase PGJ_RS04695 PF01321 Creatinase/Prolidase N-terminal domain PGJ_RS04695 PF00557 Metallopeptidase family M24 PGJ_RS04705 PF00793 DAHP synthetase I family PGJ_RS04725 PF00154 recA bacterial DNA recombination protein PGJ_RS04730 PF00578 AhpC/TSA family PGJ_RS04740 PF01926 50S ribosome-binding GTPase PGJ_RS04740 PF12631 MnmE helical domain PGJ_RS04740 PF10396 GTP-binding protein TrmE N-terminus PGJ_RS04750 PF00589 Phage integrase family PGJ_RS04750 PF02899 Phage integrase, N-terminal SAM-like domain PGJ_RS04760 PF12728 Helix-turn-helix domain PGJ_RS04760 PF12727 PBP superfamily domain PGJ_RS04795 PF02899 Phage integrase, N-terminal SAM-like domain PGJ_RS04795 PF00589 Phage integrase family PGJ_RS04810 PF01420 Type I restriction modification DNA specificity domain PGJ_RS04815 PF02384 N-6 DNA Methylase PGJ_RS04815 PF12161 HsdM N-terminal domain PGJ_RS04825 PF18766 SWI2/SNF2 ATPase PGJ_RS04825 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PGJ_RS04825 PF12008 Type I restriction and modification enzyme - subunit R C terminal PGJ_RS04830 PF01381 Helix-turn-helix PGJ_RS04875 PF02899 Phage integrase, N-terminal SAM-like domain PGJ_RS04875 PF00589 Phage integrase family PGJ_RS04905 PF01330 RuvA N terminal domain PGJ_RS04905 PF07499 RuvA, C-terminal domain PGJ_RS04915 PF01029 NusB family PGJ_RS04920 PF01118 Semialdehyde dehydrogenase, NAD binding domain PGJ_RS04920 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain PGJ_RS04925 PF01790 Prolipoprotein diacylglyceryl transferase PGJ_RS04930 PF00753 Metallo-beta-lactamase superfamily PGJ_RS04930 PF00258 Flavodoxin PGJ_RS04935 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PGJ_RS04940 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGJ_RS04940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PGJ_RS04945 PF01743 Poly A polymerase head domain PGJ_RS04945 PF02272 DHHA1 domain PGJ_RS04945 PF01368 DHH family PGJ_RS04945 PF00571 CBS domain PGJ_RS04960 PF08264 Anticodon-binding domain of tRNA PGJ_RS04960 PF09334 tRNA synthetases class I (M) PGJ_RS04960 PF13603 Leucyl-tRNA synthetase, Domain 2 PGJ_RS04965 PF01027 Inhibitor of apoptosis-promoting Bax1 PGJ_RS04970 PF00905 Penicillin binding protein transpeptidase domain PGJ_RS04970 PF17092 Penicillin-binding protein OB-like domain PGJ_RS04970 PF00912 Transglycosylase PGJ_RS04975 PF06874 Firmicute fructose-1,6-bisphosphatase PGJ_RS04985 PF00156 Phosphoribosyl transferase domain PGJ_RS04995 PF01926 50S ribosome-binding GTPase PGJ_RS04995 PF01018 GTP1/OBG PGJ_RS05020 PF00348 Polyprenyl synthetase PGJ_RS05025 PF01026 TatD related DNase PGJ_RS05035 PF01618 MotA/TolQ/ExbB proton channel family PGJ_RS05055 PF00814 Glycoprotease family PGJ_RS05060 PF01012 Electron transfer flavoprotein domain PGJ_RS05065 PF01012 Electron transfer flavoprotein domain PGJ_RS05065 PF00766 Electron transfer flavoprotein FAD-binding domain PGJ_RS05070 PF02770 Acyl-CoA dehydrogenase, middle domain PGJ_RS05070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PGJ_RS05070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PGJ_RS05095 PF02446 4-alpha-glucanotransferase PGJ_RS05100 PF03725 3' exoribonuclease family, domain 2 PGJ_RS05100 PF00013 KH domain PGJ_RS05100 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PGJ_RS05100 PF01138 3' exoribonuclease family, domain 1 PGJ_RS05100 PF00575 S1 RNA binding domain PGJ_RS05105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PGJ_RS05105 PF05698 Bacterial trigger factor protein (TF) C-terminus PGJ_RS05105 PF05697 Bacterial trigger factor protein (TF) PGJ_RS05120 PF01432 Peptidase family M3 PGJ_RS05155 PF01416 tRNA pseudouridine synthase PGJ_RS05160 PF13368 Topoisomerase C-terminal repeat PGJ_RS05160 PF01751 Toprim domain PGJ_RS05160 PF01131 DNA topoisomerase PGJ_RS05165 PF12392 Collagenase PGJ_RS05165 PF01136 Peptidase family U32 PGJ_RS05180 PF00535 Glycosyl transferase family 2 PGJ_RS05190 PF02954 Bacterial regulatory protein, Fis family PGJ_RS05190 PF00072 Response regulator receiver domain PGJ_RS05190 PF00158 Sigma-54 interaction domain PGJ_RS05195 PF00989 PAS fold PGJ_RS05195 PF00512 His Kinase A (phospho-acceptor) domain PGJ_RS05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGJ_RS05205 PF08032 RNA 2'-O ribose methyltransferase substrate binding PGJ_RS05205 PF00588 SpoU rRNA Methylase family PGJ_RS05215 PF00753 Metallo-beta-lactamase superfamily PGJ_RS05215 PF12706 Beta-lactamase superfamily domain PGJ_RS05220 PF14437 MafB19-like deaminase PGJ_RS05230 PF01351 Ribonuclease HII PGJ_RS05235 PF00266 Aminotransferase class-V PGJ_RS05245 PF00677 Lumazine binding domain PGJ_RS05260 PF00849 RNA pseudouridylate synthase PGJ_RS05260 PF01479 S4 domain PGJ_RS05265 PF01820 D-ala D-ala ligase N-terminus PGJ_RS05265 PF07478 D-ala D-ala ligase C-terminus PGJ_RS05280 PF13419 Haloacid dehalogenase-like hydrolase PGJ_RS05285 PF07676 WD40-like Beta Propeller Repeat PGJ_RS05285 PF00326 Prolyl oligopeptidase family PGJ_RS05285 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region PGJ_RS05290 PF00877 NlpC/P60 family PGJ_RS05295 PF00072 Response regulator receiver domain PGJ_RS05295 PF00486 Transcriptional regulatory protein, C terminal PGJ_RS05305 PF03932 CutC family PGJ_RS05320 PF00117 Glutamine amidotransferase class-I PGJ_RS05330 PF00082 Subtilase family PGJ_RS05335 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PGJ_RS05335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PGJ_RS05340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PGJ_RS05340 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PGJ_RS05350 PF07715 TonB-dependent Receptor Plug Domain PGJ_RS05350 PF00593 TonB dependent receptor PGJ_RS05360 PF01177 Asp/Glu/Hydantoin racemase PGJ_RS05370 PF02654 Cobalamin-5-phosphate synthase PGJ_RS05375 PF02277 Phosphoribosyltransferase PGJ_RS05380 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PGJ_RS05390 PF13333 Integrase core domain PGJ_RS05390 PF00665 Integrase core domain PGJ_RS05390 PF13276 HTH-like domain PGJ_RS05400 PF00343 Carbohydrate phosphorylase PGJ_RS05400 PF11897 Protein of unknown function (DUF3417) PGJ_RS05410 PF00691 OmpA family PGJ_RS05415 PF00691 OmpA family PGJ_RS05420 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal PGJ_RS05420 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal PGJ_RS05430 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PGJ_RS05430 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PGJ_RS05435 PF00465 Iron-containing alcohol dehydrogenase PGJ_RS05440 PF00171 Aldehyde dehydrogenase family PGJ_RS05450 PF00005 ABC transporter PGJ_RS05490 PF03435 Saccharopine dehydrogenase NADP binding domain PGJ_RS05490 PF16653 Saccharopine dehydrogenase C-terminal domain PGJ_RS05495 PF00106 short chain dehydrogenase PGJ_RS05510 PF00005 ABC transporter PGJ_RS05515 PF01032 FecCD transport family PGJ_RS05525 PF06180 Cobalt chelatase (CbiK) PGJ_RS05530 PF07715 TonB-dependent Receptor Plug Domain PGJ_RS05530 PF00593 TonB dependent receptor PGJ_RS05535 PF00589 Phage integrase family PGJ_RS05535 PF14659 Phage integrase, N-terminal SAM-like domain PGJ_RS05575 PF01131 DNA topoisomerase PGJ_RS05575 PF01751 Toprim domain PGJ_RS05585 PF17932 Tetracyclin repressor-like, C-terminal domain PGJ_RS05585 PF00440 Bacterial regulatory proteins, tetR family PGJ_RS05590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PGJ_RS05590 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PGJ_RS05605 PF00664 ABC transporter transmembrane region PGJ_RS05605 PF03412 Peptidase C39 family PGJ_RS05605 PF00005 ABC transporter PGJ_RS05720 PF08275 DNA primase catalytic core, N-terminal domain PGJ_RS05720 PF01807 CHC2 zinc finger PGJ_RS05780 PF01636 Phosphotransferase enzyme family PGJ_RS05785 PF02836 Glycosyl hydrolases family 2, TIM barrel domain PGJ_RS05785 PF02837 Glycosyl hydrolases family 2, sugar binding domain PGJ_RS05785 PF02929 Beta galactosidase small chain PGJ_RS05785 PF16353 Domain of unknown function(DUF4981) PGJ_RS05785 PF00703 Glycosyl hydrolases family 2 PGJ_RS05790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PGJ_RS05815 PF02545 Maf-like protein PGJ_RS05820 PF00468 Ribosomal protein L34 PGJ_RS05865 PF01032 FecCD transport family PGJ_RS05870 PF00005 ABC transporter PGJ_RS05880 PF00593 TonB dependent receptor PGJ_RS05880 PF07715 TonB-dependent Receptor Plug Domain PGJ_RS05890 PF00665 Integrase core domain PGJ_RS05890 PF13276 HTH-like domain PGJ_RS05890 PF13333 Integrase core domain PGJ_RS05900 PF01343 Peptidase family S49 PGJ_RS05905 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PGJ_RS05910 PF02769 AIR synthase related protein, C-terminal domain PGJ_RS05910 PF00586 AIR synthase related protein, N-terminal domain PGJ_RS05915 PF01554 MatE PGJ_RS05925 PF01965 DJ-1/PfpI family PGJ_RS05940 PF01618 MotA/TolQ/ExbB proton channel family PGJ_RS05945 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PGJ_RS05950 PF01513 ATP-NAD kinase PGJ_RS05955 PF00005 ABC transporter PGJ_RS05960 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PGJ_RS05970 PF01227 GTP cyclohydrolase I PGJ_RS05980 PF00121 Triosephosphate isomerase PGJ_RS05995 PF05362 Lon protease (S16) C-terminal proteolytic domain PGJ_RS05995 PF00004 ATPase family associated with various cellular activities (AAA) PGJ_RS05995 PF02190 ATP-dependent protease La (LON) substrate-binding domain PGJ_RS06000 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGJ_RS06000 PF13192 Thioredoxin domain PGJ_RS06005 PF10417 C-terminal domain of 1-Cys peroxiredoxin PGJ_RS06005 PF00578 AhpC/TSA family PGJ_RS06015 PF00679 Elongation factor G C-terminus PGJ_RS06015 PF03144 Elongation factor Tu domain 2 PGJ_RS06015 PF00009 Elongation factor Tu GTP binding domain PGJ_RS06015 PF14492 Elongation Factor G, domain II PGJ_RS06050 PF02401 LytB protein PGJ_RS06055 PF02224 Cytidylate kinase PGJ_RS06065 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PGJ_RS06065 PF00925 GTP cyclohydrolase II PGJ_RS06075 PF01281 Ribosomal protein L9, N-terminal domain PGJ_RS06075 PF03948 Ribosomal protein L9, C-terminal domain PGJ_RS06080 PF01084 Ribosomal protein S18 PGJ_RS06085 PF01250 Ribosomal protein S6 PGJ_RS06090 PF03979 Sigma-70 factor, region 1.1 PGJ_RS06090 PF04545 Sigma-70, region 4 PGJ_RS06090 PF04542 Sigma-70 region 2 PGJ_RS06090 PF00140 Sigma-70 factor, region 1.2 PGJ_RS06090 PF04539 Sigma-70 region 3 PGJ_RS06095 PF00595 PDZ domain PGJ_RS06100 PF01197 Ribosomal protein L31 PGJ_RS06105 PF02540 NAD synthase PGJ_RS06105 PF00958 GMP synthase C terminal domain PGJ_RS06105 PF00117 Glutamine amidotransferase class-I PGJ_RS06110 PF02548 Ketopantoate hydroxymethyltransferase PGJ_RS06115 PF03458 UPF0126 domain PGJ_RS06125 PF00091 Tubulin/FtsZ family, GTPase domain PGJ_RS06125 PF12327 FtsZ family, C-terminal domain PGJ_RS06140 PF01225 Mur ligase family, catalytic domain PGJ_RS06140 PF02875 Mur ligase family, glutamate ligase domain PGJ_RS06140 PF08245 Mur ligase middle domain PGJ_RS06145 PF03033 Glycosyltransferase family 28 N-terminal domain PGJ_RS06145 PF04101 Glycosyltransferase family 28 C-terminal domain PGJ_RS06150 PF01098 Cell cycle protein PGJ_RS06155 PF02875 Mur ligase family, glutamate ligase domain PGJ_RS06155 PF08245 Mur ligase middle domain PGJ_RS06160 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PGJ_RS06160 PF00953 Glycosyl transferase family 4 PGJ_RS06165 PF08245 Mur ligase middle domain PGJ_RS06165 PF02875 Mur ligase family, glutamate ligase domain PGJ_RS06165 PF01225 Mur ligase family, catalytic domain PGJ_RS06170 PF03793 PASTA domain PGJ_RS06170 PF00905 Penicillin binding protein transpeptidase domain PGJ_RS06170 PF03717 Penicillin-binding Protein dimerisation domain PGJ_RS06180 PF01795 MraW methylase family PGJ_RS06190 PF01118 Semialdehyde dehydrogenase, NAD binding domain PGJ_RS06190 PF02774 Semialdehyde dehydrogenase, dimerisation domain PGJ_RS06200 PF01132 Elongation factor P (EF-P) OB domain PGJ_RS06200 PF08207 Elongation factor P (EF-P) KOW-like domain PGJ_RS06200 PF09285 Elongation factor P, C-terminal PGJ_RS06210 PF02080 TrkA-C domain PGJ_RS06210 PF06826 Predicted Permease Membrane Region PGJ_RS06215 PF01546 Peptidase family M20/M25/M40 PGJ_RS06215 PF07687 Peptidase dimerisation domain PGJ_RS06220 PF01979 Amidohydrolase family PGJ_RS06225 PF01048 Phosphorylase superfamily PGJ_RS06255 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PGJ_RS06255 PF12838 4Fe-4S dicluster domain PGJ_RS06255 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PGJ_RS06255 PF10371 Domain of unknown function PGJ_RS06255 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PGJ_RS06255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PGJ_RS06285 PF02899 Phage integrase, N-terminal SAM-like domain PGJ_RS06285 PF00589 Phage integrase family PGJ_RS06295 PF00873 AcrB/AcrD/AcrF family PGJ_RS06305 PF02321 Outer membrane efflux protein PGJ_RS06305 PF08139 Prokaryotic membrane lipoprotein lipid attachment site PGJ_RS06310 PF01546 Peptidase family M20/M25/M40 PGJ_RS06310 PF07687 Peptidase dimerisation domain PGJ_RS06355 PF04294 VanW like protein PGJ_RS06360 PF02540 NAD synthase PGJ_RS06365 PF02142 MGS-like domain PGJ_RS06365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PGJ_RS06365 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PGJ_RS06370 PF00117 Glutamine amidotransferase class-I PGJ_RS06370 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PGJ_RS06375 PF00156 Phosphoribosyl transferase domain PGJ_RS06380 PF14849 YidC periplasmic domain PGJ_RS06380 PF02096 60Kd inner membrane protein PGJ_RS06385 PF06418 CTP synthase N-terminus PGJ_RS06385 PF00117 Glutamine amidotransferase class-I PGJ_RS06390 PF00571 CBS domain PGJ_RS06390 PF00478 IMP dehydrogenase / GMP reductase domain PGJ_RS06400 PF00166 Chaperonin 10 Kd subunit PGJ_RS06405 PF00118 TCP-1/cpn60 chaperonin family PGJ_RS06420 PF12705 PD-(D/E)XK nuclease superfamily PGJ_RS06430 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase PGJ_RS06435 PF01043 SecA preprotein cross-linking domain PGJ_RS06435 PF07516 SecA Wing and Scaffold domain PGJ_RS06435 PF02810 SEC-C motif PGJ_RS06435 PF07517 SecA DEAD-like domain PGJ_RS06445 PF00625 Guanylate kinase PGJ_RS06450 PF07670 Nucleoside recognition PGJ_RS06455 PF02130 Uncharacterized protein family UPF0054 PGJ_RS06460 PF01040 UbiA prenyltransferase family PGJ_RS06475 PF01364 Peptidase family C25 PGJ_RS06475 PF03785 Peptidase family C25, C terminal ig-like domain PGJ_RS06475 PF18630 Peptidase M60 C-terminal domain PGJ_RS06475 PF08126 Propeptide_C25 PGJ_RS06480 PF04055 Radical SAM superfamily PGJ_RS06485 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region PGJ_RS06485 PF00326 Prolyl oligopeptidase family PGJ_RS06490 PF01668 SmpB protein PGJ_RS06500 PF01702 Queuine tRNA-ribosyltransferase PGJ_RS06505 PF14659 Phage integrase, N-terminal SAM-like domain PGJ_RS06505 PF00589 Phage integrase family PGJ_RS06510 PF02899 Phage integrase, N-terminal SAM-like domain PGJ_RS06510 PF00589 Phage integrase family PGJ_RS06555 PF01076 Plasmid recombination enzyme PGJ_RS06565 PF02664 S-Ribosylhomocysteinase (LuxS) PGJ_RS06570 PF01048 Phosphorylase superfamily PGJ_RS06580 PF10459 Peptidase S46 PGJ_RS06595 PF05496 Holliday junction DNA helicase RuvB P-loop domain PGJ_RS06595 PF17864 RuvB AAA lid domain PGJ_RS06595 PF05491 RuvB C-terminal winged helix domain PGJ_RS06600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PGJ_RS06600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PGJ_RS06605 PF02699 Preprotein translocase subunit PGJ_RS06610 PF07949 YbbR-like protein PGJ_RS06615 PF01121 Dephospho-CoA kinase PGJ_RS06625 PF00155 Aminotransferase class I and II PGJ_RS06630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PGJ_RS06640 PF02569 Pantoate-beta-alanine ligase PGJ_RS06650 PF04055 Radical SAM superfamily PGJ_RS06650 PF06969 HemN C-terminal domain PGJ_RS06670 PF08331 Domain of unknown function (DUF1730) PGJ_RS06685 PF01238 Phosphomannose isomerase type I PGJ_RS06695 PF01475 Ferric uptake regulator family PGJ_RS06700 PF00709 Adenylosuccinate synthetase PGJ_RS06705 PF02875 Mur ligase family, glutamate ligase domain PGJ_RS06705 PF08245 Mur ligase middle domain PGJ_RS06735 PF00571 CBS domain PGJ_RS06735 PF01595 Cyclin M transmembrane N-terminal domain PGJ_RS06735 PF03471 Transporter associated domain PGJ_RS06755 PF03309 Type III pantothenate kinase PGJ_RS06760 PF00899 ThiF family PGJ_RS06765 PF01546 Peptidase family M20/M25/M40 PGJ_RS06765 PF07687 Peptidase dimerisation domain PGJ_RS06795 PF13807 G-rich domain on putative tyrosine kinase PGJ_RS06795 PF02706 Chain length determinant protein PGJ_RS06795 PF13614 AAA domain PGJ_RS06810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PGJ_RS06815 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF PGJ_RS06815 PF01189 16S rRNA methyltransferase RsmB/F PGJ_RS06815 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF PGJ_RS06820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PGJ_RS06825 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PGJ_RS06825 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PGJ_RS06825 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PGJ_RS06840 PF13276 HTH-like domain PGJ_RS06840 PF00665 Integrase core domain PGJ_RS06840 PF13333 Integrase core domain PGJ_RS06845 PF00484 Carbonic anhydrase PGJ_RS06870 PF00873 AcrB/AcrD/AcrF family PGJ_RS06885 PF00756 Putative esterase PGJ_RS06885 PF01476 LysM domain PGJ_RS06920 PF00574 Clp protease PGJ_RS06925 PF10431 C-terminal, D2-small domain, of ClpB protein PGJ_RS06925 PF06689 ClpX C4-type zinc finger PGJ_RS06925 PF07724 AAA domain (Cdc48 subfamily) PGJ_RS06930 PF16124 RecQ zinc-binding PGJ_RS06930 PF09382 RQC domain PGJ_RS06930 PF00570 HRDC domain PGJ_RS06930 PF00270 DEAD/DEAH box helicase PGJ_RS06930 PF00271 Helicase conserved C-terminal domain PGJ_RS06935 PF00639 PPIC-type PPIASE domain PGJ_RS06935 PF09312 SurA N-terminal domain PGJ_RS06950 PF01119 DNA mismatch repair protein, C-terminal domain PGJ_RS06950 PF08676 MutL C terminal dimerisation domain PGJ_RS06955 PF07675 Cleaved Adhesin Domain PGJ_RS06955 PF10365 Domain of unknown function (DUF2436) PGJ_RS06985 PF00013 KH domain PGJ_RS06985 PF01966 HD domain PGJ_RS06985 PF12072 Domain of unknown function (DUF3552) PGJ_RS06990 PF04468 PSP1 C-terminal conserved region PGJ_RS07000 PF13175 AAA ATPase domain PGJ_RS07010 PF00027 Cyclic nucleotide-binding domain PGJ_RS07010 PF13545 Crp-like helix-turn-helix domain PGJ_RS07015 PF05000 RNA polymerase Rpb1, domain 4 PGJ_RS07015 PF04998 RNA polymerase Rpb1, domain 5 PGJ_RS07015 PF04997 RNA polymerase Rpb1, domain 1 PGJ_RS07015 PF00623 RNA polymerase Rpb1, domain 2 PGJ_RS07015 PF04983 RNA polymerase Rpb1, domain 3 PGJ_RS07020 PF00562 RNA polymerase Rpb2, domain 6 PGJ_RS07020 PF10385 RNA polymerase beta subunit external 1 domain PGJ_RS07020 PF04563 RNA polymerase beta subunit PGJ_RS07020 PF04565 RNA polymerase Rpb2, domain 3 PGJ_RS07020 PF04560 RNA polymerase Rpb2, domain 7 PGJ_RS07020 PF04561 RNA polymerase Rpb2, domain 2 PGJ_RS07025 PF16320 Ribosomal protein L7/L12 dimerisation domain PGJ_RS07025 PF00542 Ribosomal protein L7/L12 C-terminal domain PGJ_RS07030 PF00466 Ribosomal protein L10 PGJ_RS07035 PF00687 Ribosomal protein L1p/L10e family PGJ_RS07040 PF03946 Ribosomal protein L11, N-terminal domain PGJ_RS07040 PF00298 Ribosomal protein L11, RNA binding domain PGJ_RS07045 PF00467 KOW motif PGJ_RS07045 PF02357 Transcription termination factor nusG PGJ_RS07060 PF03143 Elongation factor Tu C-terminal domain PGJ_RS07060 PF03144 Elongation factor Tu domain 2 PGJ_RS07060 PF00009 Elongation factor Tu GTP binding domain PGJ_RS07075 PF00589 Phage integrase family PGJ_RS07075 PF02899 Phage integrase, N-terminal SAM-like domain PGJ_RS07080 PF01165 Ribosomal protein S21 PGJ_RS07085 PF00488 MutS domain V PGJ_RS07085 PF01713 Smr domain PGJ_RS07090 PF02163 Peptidase family M50 PGJ_RS07090 PF17820 PDZ domain PGJ_RS07095 PF00999 Sodium/hydrogen exchanger family PGJ_RS07095 PF02080 TrkA-C domain PGJ_RS07095 PF03471 Transporter associated domain PGJ_RS07100 PF04851 Type III restriction enzyme, res subunit PGJ_RS07100 PF17757 UvrB interaction domain PGJ_RS07100 PF12344 Ultra-violet resistance protein B PGJ_RS07100 PF00271 Helicase conserved C-terminal domain PGJ_RS07100 PF02151 UvrB/uvrC motif PGJ_RS07105 PF00889 Elongation factor TS PGJ_RS07110 PF00318 Ribosomal protein S2 PGJ_RS07115 PF00380 Ribosomal protein S9/S16 PGJ_RS07120 PF00572 Ribosomal protein L13 PGJ_RS07130 PF01467 Cytidylyltransferase-like PGJ_RS07135 PF00204 DNA gyrase B PGJ_RS07135 PF00986 DNA gyrase B subunit, carboxyl terminus PGJ_RS07135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGJ_RS07135 PF01751 Toprim domain PGJ_RS07150 PF10672 S-adenosylmethionine-dependent methyltransferase PGJ_RS07150 PF17785 PUA-like domain PGJ_RS07170 PF04011 LemA family PGJ_RS07175 PF01613 Flavin reductase like domain PGJ_RS07180 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain PGJ_RS07180 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain PGJ_RS07185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PGJ_RS07185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PGJ_RS07200 PF02973 Sialidase, N-terminal domain PGJ_RS07200 PF00754 F5/8 type C domain PGJ_RS07200 PF13088 BNR repeat-like domain PGJ_RS07215 PF17191 RecG wedge domain PGJ_RS07215 PF00271 Helicase conserved C-terminal domain PGJ_RS07215 PF00270 DEAD/DEAH box helicase PGJ_RS07220 PF16363 GDP-mannose 4,6 dehydratase PGJ_RS07225 PF01926 50S ribosome-binding GTPase PGJ_RS07240 PF01053 Cys/Met metabolism PLP-dependent enzyme PGJ_RS07265 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase PGJ_RS07270 PF00535 Glycosyl transferase family 2 PGJ_RS07280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PGJ_RS07280 PF07497 Rho termination factor, RNA-binding domain PGJ_RS07295 PF07837 Formiminotransferase domain, N-terminal subdomain PGJ_RS07295 PF02971 Formiminotransferase domain PGJ_RS07300 PF01979 Amidohydrolase family PGJ_RS07315 PF04961 Formiminotransferase-cyclodeaminase PGJ_RS07320 PF00221 Aromatic amino acid lyase PGJ_RS07355 PF02403 Seryl-tRNA synthetase N-terminal domain PGJ_RS07355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PGJ_RS07360 PF01016 Ribosomal L27 protein PGJ_RS07365 PF00829 Ribosomal prokaryotic L21 protein PGJ_RS07380 PF00535 Glycosyl transferase family 2 PGJ_RS07385 PF00881 Nitroreductase family PGJ_RS07390 PF02424 ApbE family PGJ_RS07395 PF02508 Rnf-Nqr subunit, membrane protein PGJ_RS07400 PF02508 Rnf-Nqr subunit, membrane protein PGJ_RS07405 PF04205 FMN-binding domain PGJ_RS07410 PF03116 NQR2, RnfD, RnfE family PGJ_RS07415 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PGJ_RS07415 PF13237 4Fe-4S dicluster domain PGJ_RS07415 PF13375 RnfC Barrel sandwich hybrid domain PGJ_RS07415 PF10531 SLBB domain PGJ_RS07420 PF13187 4Fe-4S dicluster domain PGJ_RS07420 PF04060 Putative Fe-S cluster PGJ_RS07440 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PGJ_RS07440 PF02769 AIR synthase related protein, C-terminal domain PGJ_RS07440 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PGJ_RS07445 PF17782 DprA winged helix domain PGJ_RS07445 PF02481 DNA recombination-mediator protein A PGJ_RS07465 PF02417 Chromate transporter PGJ_RS07485 PF03781 Sulfatase-modifying factor enzyme 1 PGJ_RS07505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PGJ_RS07510 PF00005 ABC transporter PGJ_RS07515 PF02687 FtsX-like permease family PGJ_RS07515 PF12704 MacB-like periplasmic core domain PGJ_RS07525 PF03949 Malic enzyme, NAD binding domain PGJ_RS07525 PF00390 Malic enzyme, N-terminal domain PGJ_RS07525 PF01515 Phosphate acetyl/butaryl transferase PGJ_RS07535 PF02502 Ribose/Galactose Isomerase PGJ_RS07540 PF00456 Transketolase, thiamine diphosphate binding domain PGJ_RS07540 PF02780 Transketolase, C-terminal domain PGJ_RS07540 PF02779 Transketolase, pyrimidine binding domain PGJ_RS07560 PF00586 AIR synthase related protein, N-terminal domain PGJ_RS07560 PF02769 AIR synthase related protein, C-terminal domain PGJ_RS07565 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region PGJ_RS07565 PF00326 Prolyl oligopeptidase family PGJ_RS07570 PF00274 Fructose-bisphosphate aldolase class-I PGJ_RS07580 PF00312 Ribosomal protein S15 PGJ_RS07590 PF00005 ABC transporter PGJ_RS07600 PF07549 SecD/SecF GG Motif PGJ_RS07600 PF02355 Protein export membrane protein PGJ_RS07605 PF00035 Double-stranded RNA binding motif PGJ_RS07605 PF14622 Ribonuclease-III-like PGJ_RS07610 PF00109 Beta-ketoacyl synthase, N-terminal domain PGJ_RS07610 PF02801 Beta-ketoacyl synthase, C-terminal domain PGJ_RS07615 PF00550 Phosphopantetheine attachment site PGJ_RS07620 PF00551 Formyl transferase PGJ_RS07620 PF02911 Formyl transferase, C-terminal domain PGJ_RS07630 PF01078 Magnesium chelatase, subunit ChlI PGJ_RS07630 PF13335 Magnesium chelatase, subunit ChlI C-terminal PGJ_RS07635 PF13333 Integrase core domain PGJ_RS07635 PF00665 Integrase core domain PGJ_RS07635 PF13276 HTH-like domain PGJ_RS07650 PF01409 tRNA synthetases class II core domain (F) PGJ_RS07650 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PGJ_RS07655 PF00730 HhH-GPD superfamily base excision DNA repair protein PGJ_RS07655 PF00633 Helix-hairpin-helix motif PGJ_RS07655 PF10576 Iron-sulfur binding domain of endonuclease III PGJ_RS07660 PF01569 PAP2 superfamily PGJ_RS07665 PF02559 CarD-like/TRCF domain PGJ_RS07665 PF00271 Helicase conserved C-terminal domain PGJ_RS07665 PF03461 TRCF domain PGJ_RS07665 PF17757 UvrB interaction domain PGJ_RS07665 PF00270 DEAD/DEAH box helicase PGJ_RS07670 PF01025 GrpE PGJ_RS07675 PF01556 DnaJ C terminal domain PGJ_RS07675 PF00684 DnaJ central domain PGJ_RS07675 PF00226 DnaJ domain PGJ_RS07680 PF01883 Iron-sulfur cluster assembly protein PGJ_RS07685 PF12850 Calcineurin-like phosphoesterase superfamily domain PGJ_RS07690 PF01661 Macro domain PGJ_RS07695 PF00155 Aminotransferase class I and II PGJ_RS07700 PF00485 Phosphoribulokinase / Uridine kinase family PGJ_RS07755 PF01432 Peptidase family M3 PGJ_RS07770 PF00999 Sodium/hydrogen exchanger family PGJ_RS07775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PGJ_RS07775 PF02806 Alpha amylase, C-terminal all-beta domain PGJ_RS07775 PF00128 Alpha amylase, catalytic domain PGJ_RS07780 PF01612 3'-5' exonuclease PGJ_RS07780 PF01367 5'-3' exonuclease, C-terminal SAM fold PGJ_RS07780 PF00476 DNA polymerase family A PGJ_RS07780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PGJ_RS07790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGJ_RS07790 PF00512 His Kinase A (phospho-acceptor) domain PGJ_RS07790 PF13426 PAS domain PGJ_RS07790 PF08448 PAS fold PGJ_RS07790 PF00072 Response regulator receiver domain PGJ_RS07815 PF02874 ATP synthase alpha/beta family, beta-barrel domain PGJ_RS07815 PF16886 ATPsynthase alpha/beta subunit N-term extension PGJ_RS07815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PGJ_RS07820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PGJ_RS07820 PF02874 ATP synthase alpha/beta family, beta-barrel domain PGJ_RS07830 PF01496 V-type ATPase 116kDa subunit family PGJ_RS07840 PF13291 ACT domain PGJ_RS07840 PF02824 TGS domain PGJ_RS07840 PF04607 Region found in RelA / SpoT proteins PGJ_RS07870 PF10410 DnaB-helicase binding domain of primase PGJ_RS07870 PF08275 DNA primase catalytic core, N-terminal domain PGJ_RS07870 PF01807 CHC2 zinc finger PGJ_RS07875 PF02348 Cytidylyltransferase PGJ_RS07880 PF02525 Flavodoxin-like fold PGJ_RS07885 PF01578 Cytochrome C assembly protein PGJ_RS07900 PF02335 Cytochrome c552 PGJ_RS07905 PF03264 NapC/NirT cytochrome c family, N-terminal region PGJ_RS07920 PF00113 Enolase, C-terminal TIM barrel domain PGJ_RS07920 PF03952 Enolase, N-terminal domain PGJ_RS07930 PF08281 Sigma-70, region 4 PGJ_RS07930 PF04542 Sigma-70 region 2 PGJ_RS07940 PF00501 AMP-binding enzyme PGJ_RS07945 PF00271 Helicase conserved C-terminal domain PGJ_RS07945 PF00270 DEAD/DEAH box helicase PGJ_RS07950 PF13333 Integrase core domain PGJ_RS07950 PF00665 Integrase core domain PGJ_RS07950 PF13276 HTH-like domain PGJ_RS07960 PF00534 Glycosyl transferases group 1 PGJ_RS07960 PF08323 Starch synthase catalytic domain PGJ_RS07970 PF03825 Nucleoside H+ symporter PGJ_RS07975 PF10365 Domain of unknown function (DUF2436) PGJ_RS07975 PF07675 Cleaved Adhesin Domain PGJ_RS07990 PF08126 Propeptide_C25 PGJ_RS07990 PF03785 Peptidase family C25, C terminal ig-like domain PGJ_RS07990 PF01364 Peptidase family C25 PGJ_RS07990 PF10365 Domain of unknown function (DUF2436) PGJ_RS07990 PF07675 Cleaved Adhesin Domain PGJ_RS08005 PF01042 Endoribonuclease L-PSP PGJ_RS08010 PF08032 RNA 2'-O ribose methyltransferase substrate binding PGJ_RS08010 PF00588 SpoU rRNA Methylase family PGJ_RS08015 PF02463 RecF/RecN/SMC N terminal domain PGJ_RS08025 PF04127 DNA / pantothenate metabolism flavoprotein PGJ_RS08025 PF02441 Flavoprotein PGJ_RS08030 PF00929 Exonuclease PGJ_RS08035 PF02768 DNA polymerase III beta subunit, C-terminal domain PGJ_RS08035 PF02767 DNA polymerase III beta subunit, central domain PGJ_RS08035 PF00712 DNA polymerase III beta subunit, N-terminal domain PGJ_RS08040 PF01812 5-formyltetrahydrofolate cyclo-ligase family PGJ_RS08045 PF03572 Peptidase family S41 PGJ_RS08045 PF13180 PDZ domain PGJ_RS08045 PF01471 Putative peptidoglycan binding domain PGJ_RS08060 PF00258 Flavodoxin PGJ_RS08065 PF02595 Glycerate kinase family PGJ_RS08090 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PGJ_RS08095 PF01209 ubiE/COQ5 methyltransferase family PGJ_RS08100 PF01175 Urocanase Rossmann-like domain PGJ_RS08100 PF17392 Urocanase C-terminal domain PGJ_RS08100 PF17391 Urocanase N-terminal domain PGJ_RS08105 PF02021 Uncharacterised protein family UPF0102 PGJ_RS08120 PF06965 Na+/H+ antiporter 1 PGJ_RS08125 PF09190 DALR domain PGJ_RS08125 PF01406 tRNA synthetases class I (C) catalytic domain PGJ_RS08130 PF01734 Patatin-like phospholipase PGJ_RS08135 PF00535 Glycosyl transferase family 2 PGJ_RS08155 PF17941 Polyphosphate kinase C-terminal domain 1 PGJ_RS08155 PF13090 Polyphosphate kinase C-terminal domain 2 PGJ_RS08155 PF13089 Polyphosphate kinase N-terminal domain PGJ_RS08155 PF02503 Polyphosphate kinase middle domain PGJ_RS08160 PF16360 GTP-binding GTPase Middle Region PGJ_RS08160 PF01926 50S ribosome-binding GTPase PGJ_RS08160 PF13167 GTP-binding GTPase N-terminal PGJ_RS08215 PF00438 S-adenosylmethionine synthetase, N-terminal domain PGJ_RS08215 PF02773 S-adenosylmethionine synthetase, C-terminal domain PGJ_RS08215 PF02772 S-adenosylmethionine synthetase, central domain PGJ_RS08235 PF03193 RsgA GTPase PGJ_RS08235 PF16745 RsgA N-terminal domain PGJ_RS08240 PF01765 Ribosome recycling factor PGJ_RS08245 PF00696 Amino acid kinase family PGJ_RS08255 PF01196 Ribosomal protein L17 PGJ_RS08260 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PGJ_RS08260 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PGJ_RS08260 PF01000 RNA polymerase Rpb3/RpoA insert domain PGJ_RS08265 PF00163 Ribosomal protein S4/S9 N-terminal domain PGJ_RS08265 PF01479 S4 domain PGJ_RS08270 PF00411 Ribosomal protein S11 PGJ_RS08275 PF00416 Ribosomal protein S13/S18 PGJ_RS08280 PF01176 Translation initiation factor 1A / IF-1 PGJ_RS08285 PF00557 Metallopeptidase family M24 PGJ_RS08290 PF00344 SecY translocase PGJ_RS08295 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PGJ_RS08300 PF00327 Ribosomal protein L30p/L7e PGJ_RS08305 PF00333 Ribosomal protein S5, N-terminal domain PGJ_RS08305 PF03719 Ribosomal protein S5, C-terminal domain PGJ_RS08310 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PGJ_RS08315 PF00347 Ribosomal protein L6 PGJ_RS08320 PF00410 Ribosomal protein S8 PGJ_RS08325 PF00253 Ribosomal protein S14p/S29e PGJ_RS08330 PF00673 ribosomal L5P family C-terminus PGJ_RS08330 PF00281 Ribosomal protein L5 PGJ_RS08335 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PGJ_RS08335 PF00467 KOW motif PGJ_RS08340 PF00238 Ribosomal protein L14p/L23e PGJ_RS08345 PF00366 Ribosomal protein S17 PGJ_RS08350 PF00831 Ribosomal L29 protein PGJ_RS08355 PF00252 Ribosomal protein L16p/L10e PGJ_RS08360 PF07650 KH domain PGJ_RS08360 PF00189 Ribosomal protein S3, C-terminal domain PGJ_RS08365 PF00237 Ribosomal protein L22p/L17e PGJ_RS08370 PF00203 Ribosomal protein S19 PGJ_RS08375 PF00181 Ribosomal Proteins L2, RNA binding domain PGJ_RS08375 PF03947 Ribosomal Proteins L2, C-terminal domain PGJ_RS08380 PF00276 Ribosomal protein L23 PGJ_RS08385 PF00573 Ribosomal protein L4/L1 family PGJ_RS08390 PF00297 Ribosomal protein L3 PGJ_RS08395 PF00338 Ribosomal protein S10p/S20e PGJ_RS08400 PF03144 Elongation factor Tu domain 2 PGJ_RS08400 PF14492 Elongation Factor G, domain II PGJ_RS08400 PF00679 Elongation factor G C-terminus PGJ_RS08400 PF00009 Elongation factor Tu GTP binding domain PGJ_RS08400 PF03764 Elongation factor G, domain IV PGJ_RS08405 PF00177 Ribosomal protein S7p/S5e PGJ_RS08410 PF00164 Ribosomal protein S12/S23 PGJ_RS08420 PF13276 HTH-like domain PGJ_RS08420 PF00665 Integrase core domain PGJ_RS08420 PF13333 Integrase core domain PGJ_RS08430 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PGJ_RS08440 PF00950 ABC 3 transport family PGJ_RS08455 PF00056 lactate/malate dehydrogenase, NAD binding domain PGJ_RS08455 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PGJ_RS08460 PF13276 HTH-like domain PGJ_RS08460 PF00665 Integrase core domain PGJ_RS08460 PF13333 Integrase core domain PGJ_RS08475 PF01594 AI-2E family transporter PGJ_RS08480 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PGJ_RS08480 PF00749 tRNA synthetases class I (E and Q), catalytic domain PGJ_RS08495 PF01370 NAD dependent epimerase/dehydratase family PGJ_RS08505 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PGJ_RS08505 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PGJ_RS08515 PF00471 Ribosomal protein L33 PGJ_RS08520 PF00830 Ribosomal L28 family PGJ_RS08535 PF02661 Fic/DOC family PGJ_RS08540 PF01300 Telomere recombination PGJ_RS08545 PF02397 Bacterial sugar transferase PGJ_RS08550 PF00654 Voltage gated chloride channel PGJ_RS08555 PF05552 Conserved TM helix PGJ_RS08555 PF00924 Mechanosensitive ion channel PGJ_RS08630 PF01134 Glucose inhibited division protein A PGJ_RS08630 PF13932 GidA associated domain PGJ_RS08635 PF01541 GIY-YIG catalytic domain PGJ_RS08635 PF08459 UvrC Helix-hairpin-helix N-terminal PGJ_RS08640 PF02580 D-Tyr-tRNA(Tyr) deacylase PGJ_RS08650 PF01791 DeoC/LacD family aldolase PGJ_RS08655 PF00348 Polyprenyl synthetase PGJ_RS08670 PF10502 Signal peptidase, peptidase S26 PGJ_RS08675 PF01113 Dihydrodipicolinate reductase, N-terminus PGJ_RS08675 PF05173 Dihydrodipicolinate reductase, C-terminus PGJ_RS08680 PF13286 Phosphohydrolase-associated domain PGJ_RS08680 PF01966 HD domain PGJ_RS08685 PF03601 Conserved hypothetical protein 698 PGJ_RS08695 PF07715 TonB-dependent Receptor Plug Domain PGJ_RS08695 PF00593 TonB dependent receptor PGJ_RS08700 PF11967 Recombination protein O N terminal PGJ_RS08700 PF02565 Recombination protein O C terminal PGJ_RS08705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGJ_RS08705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGJ_RS08705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGJ_RS08705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGJ_RS08710 PF00884 Sulfatase PGJ_RS08720 PF02911 Formyl transferase, C-terminal domain PGJ_RS08720 PF00551 Formyl transferase PGJ_RS08770 PF00155 Aminotransferase class I and II PGJ_RS08780 PF05192 MutS domain III PGJ_RS08780 PF05188 MutS domain II PGJ_RS08780 PF05190 MutS family domain IV PGJ_RS08780 PF01624 MutS domain I PGJ_RS08780 PF00488 MutS domain V PGJ_RS08785 PF01751 Toprim domain PGJ_RS08785 PF01131 DNA topoisomerase PGJ_RS08815 PF00664 ABC transporter transmembrane region PGJ_RS08815 PF03412 Peptidase C39 family PGJ_RS08815 PF00005 ABC transporter PGJ_RS09030 PF00589 Phage integrase family PGJ_RS09030 PF02899 Phage integrase, N-terminal SAM-like domain PGJ_RS09040 PF08126 Propeptide_C25 PGJ_RS09040 PF03785 Peptidase family C25, C terminal ig-like domain PGJ_RS09040 PF07675 Cleaved Adhesin Domain PGJ_RS09040 PF10365 Domain of unknown function (DUF2436) PGJ_RS09040 PF01364 Peptidase family C25 PGJ_RS09045 PF00300 Histidine phosphatase superfamily (branch 1) PGJ_RS09055 PF04073 Aminoacyl-tRNA editing domain PGJ_RS09075 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PGJ_RS09075 PF18074 Primosomal protein N C-terminal domain PGJ_RS09075 PF17764 3′ DNA-binding domain (3′BD) PGJ_RS09075 PF00270 DEAD/DEAH box helicase PGJ_RS09075 PF00271 Helicase conserved C-terminal domain PGJ_RS09080 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGJ_RS09080 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PGJ_RS09085 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B PGJ_RS09085 PF00175 Oxidoreductase NAD-binding domain PGJ_RS09085 PF00970 Oxidoreductase FAD-binding domain PGJ_RS09090 PF01746 tRNA (Guanine-1)-methyltransferase PGJ_RS09095 PF00520 Ion transport protein PGJ_RS09095 PF00027 Cyclic nucleotide-binding domain PGJ_RS09105 PF01510 N-acetylmuramoyl-L-alanine amidase PGJ_RS09125 PF13333 Integrase core domain PGJ_RS09125 PF13276 HTH-like domain PGJ_RS09125 PF00665 Integrase core domain PGJ_RS09130 PF08534 Redoxin PGJ_RS09135 PF01784 NIF3 (NGG1p interacting factor 3) PGJ_RS09145 PF01171 PP-loop family PGJ_RS09145 PF11734 TilS substrate C-terminal domain PGJ_RS09150 PF14493 Helix-turn-helix domain PGJ_RS09150 PF05970 PIF1-like helicase PGJ_RS09170 PF00701 Dihydrodipicolinate synthetase family PGJ_RS09185 PF01180 Dihydroorotate dehydrogenase PGJ_RS09205 PF13333 Integrase core domain PGJ_RS09205 PF00665 Integrase core domain PGJ_RS09205 PF13276 HTH-like domain PGJ_RS09220 PF00303 Thymidylate synthase PGJ_RS09225 PF00186 Dihydrofolate reductase PGJ_RS09230 PF13393 Histidyl-tRNA synthetase PGJ_RS09230 PF03129 Anticodon binding domain PGJ_RS09240 PF04055 Radical SAM superfamily PGJ_RS09250 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PGJ_RS09255 PF01467 Cytidylyltransferase-like PGJ_RS09275 PF12705 PD-(D/E)XK nuclease superfamily PGJ_RS09275 PF13361 UvrD-like helicase C-terminal domain PGJ_RS09275 PF00580 UvrD/REP helicase N-terminal domain PGJ_RS09310 PF04371 Porphyromonas-type peptidyl-arginine deiminase PGJ_RS09325 PF00202 Aminotransferase class-III PGJ_RS09330 PF06968 Biotin and Thiamin Synthesis associated domain PGJ_RS09330 PF04055 Radical SAM superfamily PGJ_RS09335 PF00854 POT family PGJ_RS09345 PF00579 tRNA synthetases class I (W and Y) PGJ_RS09355 PF02590 Predicted SPOUT methyltransferase PGJ_RS09360 PF01641 SelR domain PGJ_RS09360 PF01625 Peptide methionine sulfoxide reductase PGJ_RS09360 PF08534 Redoxin PGJ_RS09370 PF01545 Cation efflux family PGJ_RS09370 PF16916 Dimerisation domain of Zinc Transporter PGJ_RS09375 PF02152 Dihydroneopterin aldolase PGJ_RS09400 PF14572 Phosphoribosyl synthetase-associated domain PGJ_RS09400 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PGJ_RS09405 PF00271 Helicase conserved C-terminal domain PGJ_RS09405 PF00270 DEAD/DEAH box helicase PGJ_RS09445 PF04055 Radical SAM superfamily PGJ_RS09445 PF06968 Biotin and Thiamin Synthesis associated domain PGJ_RS09450 PF05690 Thiazole biosynthesis protein ThiG PGJ_RS09455 PF02581 Thiamine monophosphate synthase PGJ_RS09460 PF13667 ThiC-associated domain PGJ_RS09460 PF01964 Radical SAM ThiC family PGJ_RS09470 PF13276 HTH-like domain PGJ_RS09470 PF00665 Integrase core domain PGJ_RS09470 PF13333 Integrase core domain PGJ_RS09495 PF00886 Ribosomal protein S16 PGJ_RS09500 PF01609 Transposase DDE domain PGJ_RS09500 PF13808 DDE_Tnp_1-associated PGJ_RS09505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PGJ_RS09505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PGJ_RS09510 PF00753 Metallo-beta-lactamase superfamily PGJ_RS09515 PF00710 Asparaginase, N-terminal PGJ_RS09515 PF17763 Glutaminase/Asparaginase C-terminal domain PGJ_RS09530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PGJ_RS09530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PGJ_RS09540 PF01168 Alanine racemase, N-terminal domain PGJ_RS09550 PF13276 HTH-like domain PGJ_RS09550 PF00665 Integrase core domain PGJ_RS09550 PF13333 Integrase core domain PGJ_RS09570 PF06321 Major fimbrial subunit protein (FimA) PGJ_RS09575 PF08842 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 PGJ_RS09580 PF06321 Major fimbrial subunit protein (FimA) PGJ_RS09605 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PGJ_RS09605 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PGJ_RS09610 PF01926 50S ribosome-binding GTPase PGJ_RS09610 PF07650 KH domain PGJ_RS09615 PF01926 50S ribosome-binding GTPase PGJ_RS09615 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PGJ_RS09625 PF01522 Polysaccharide deacetylase PGJ_RS09635 PF01266 FAD dependent oxidoreductase PGJ_RS09635 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS09645 PF00860 Permease family PGJ_RS09695 PF02657 Fe-S metabolism associated domain PGJ_RS09700 PF01593 Flavin containing amine oxidoreductase PGJ_RS09710 PF02684 Lipid-A-disaccharide synthetase PGJ_RS09715 PF01975 Survival protein SurE PGJ_RS09725 PF03129 Anticodon binding domain PGJ_RS09760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PGJ_RS09760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PGJ_RS09790 PF00970 Oxidoreductase FAD-binding domain PGJ_RS09790 PF00111 2Fe-2S iron-sulfur cluster binding domain PGJ_RS09790 PF00175 Oxidoreductase NAD-binding domain PGJ_RS09795 PF02508 Rnf-Nqr subunit, membrane protein PGJ_RS09800 PF02508 Rnf-Nqr subunit, membrane protein PGJ_RS09805 PF04205 FMN-binding domain PGJ_RS09810 PF03116 NQR2, RnfD, RnfE family PGJ_RS09815 PF11973 NQRA C-terminal domain PGJ_RS09815 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PGJ_RS09830 PF01040 UbiA prenyltransferase family PGJ_RS09835 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PGJ_RS09835 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PGJ_RS09840 PF00696 Amino acid kinase family PGJ_RS09840 PF01842 ACT domain PGJ_RS09845 PF00005 ABC transporter PGJ_RS09850 PF01476 LysM domain PGJ_RS09850 PF08525 Opacity-associated protein A N-terminal motif PGJ_RS09850 PF01551 Peptidase family M23 PGJ_RS09860 PF01609 Transposase DDE domain PGJ_RS09875 PF08126 Propeptide_C25 PGJ_RS09875 PF18630 Peptidase M60 C-terminal domain PGJ_RS09875 PF03785 Peptidase family C25, C terminal ig-like domain PGJ_RS09875 PF01364 Peptidase family C25 PGJ_RS09880 PF12848 ABC transporter PGJ_RS09880 PF00005 ABC transporter PGJ_RS09880 PF16326 ABC transporter C-terminal domain PGJ_RS09890 PF01327 Polypeptide deformylase PGJ_RS09895 PF03652 Holliday junction resolvase PGJ_RS09900 PF00207 Alpha-2-macroglobulin family PGJ_RS09900 PF01835 MG2 domain PGJ_RS09900 PF07703 Alpha-2-macroglobulin bait region domain PGJ_RS09905 PF08546 Ketopantoate reductase PanE/ApbA C terminal PGJ_RS09905 PF02558 Ketopantoate reductase PanE/ApbA PGJ_RS09910 PF00005 ABC transporter PGJ_RS09910 PF12848 ABC transporter PGJ_RS09930 PF17755 UvrA DNA-binding domain PGJ_RS09930 PF17760 UvrA interaction domain PGJ_RS09955 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGJ_RS09955 PF04324 BFD-like [2Fe-2S] binding domain PGJ_RS09965 PF00483 Nucleotidyl transferase PGJ_RS09965 PF01050 Mannose-6-phosphate isomerase PGJ_RS09975 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PGJ_RS09975 PF02780 Transketolase, C-terminal domain PGJ_RS09975 PF02779 Transketolase, pyrimidine binding domain PGJ_RS09980 PF02080 TrkA-C domain PGJ_RS09980 PF02254 TrkA-N domain PGJ_RS09985 PF02386 Cation transport protein PGJ_RS09995 PF00919 Uncharacterized protein family UPF0004 PGJ_RS09995 PF04055 Radical SAM superfamily