locus strain_id interpro function go others PGJ_RS00005 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001957|IPR003593|IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR024633|IPR027417 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|DnaA N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PF11638|PR00051|PS01008|PTHR30050|PTHR30050:SF2|SM00382|SM00760|SSF48295|SSF52540|TIGR00362 PGJ_RS00010 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001451|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like GO:0016740 G3DSA:2.160.10.10|PF00132|PF14602|PS00101|PTHR23416|PTHR23416:SF53|SSF51161 PGJ_RS00015 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 PGJ_RS00020 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003000|IPR026591|IPR027546|IPR029035 DHS-like NAD/FAD-binding domain|Sirtuin family|Sirtuin family, catalytic core small domain|Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 G3DSA:3.30.1600.10|G3DSA:3.40.50.1220|MF_01121|PF02146|PTHR11085|SSF52467 PGJ_RS00025 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR31302|PTHR31302:SF0|SSF56300 PGJ_RS00030 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132|TIGR00797 PGJ_RS00045 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001270|IPR001943|IPR003593|IPR003959|IPR004176|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase|UVR domain GO:0005515|GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02151|PF02861|PF07724|PF10431|PR00300|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923 PGJ_RS00050 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001466|IPR001764|IPR002772|IPR012338|IPR017853|IPR019800 Beta-lactamase-related|Beta-lactamase/transpeptidase-like|Glycoside hydrolase family 3 C-terminal domain|Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal|Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 G3DSA:3.20.20.300|G3DSA:3.40.50.1700|G3DSA:3.40.710.10|PF00144|PF00933|PR00133|PS00775|PTHR30480|PTHR30480:SF5|SSF51445|SSF56601 PGJ_RS00055 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF338|SSF53383 PGJ_RS00060 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005238 ComB-like GO:0000287|GO:0050532 G3DSA:3.90.1560.10|PF04029|PTHR37311|PTHR37311:SF1|SSF142823 PGJ_RS00065 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00676|PS00688|PTHR32071|PTHR32071:SF15|SM00382|SM00448|SSF46689|SSF52172|SSF52540 PGJ_RS00070 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003594|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|PTHR24423:SF450|SM00387|SSF55874 PGJ_RS00080 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF13463|PTHR33164|SM00347|SSF46785 PGJ_RS00085 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001269|IPR004652|IPR013785|IPR018517|IPR024036 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, TIM-barrel, NifR3|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine synthase, putative, C-terminal GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.10.1200.80|G3DSA:3.20.20.70|PF01207|PIRSF006621|PS01136|PTHR11082|PTHR11082:SF25|SSF51395|TIGR00737 PGJ_RS00090 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001902|IPR002645|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain|STAS domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.30.750.24|PF00916|PF01740|PTHR11814|PTHR11814:SF112|SSF52091|TIGR00815 PGJ_RS00095 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003781|IPR009718|IPR011991|IPR016040|IPR022876 CoA-binding|NAD(P)-binding domain|Redox-sensing transcriptional repressor Rex|Rex DNA-binding, C-terminal domain|Winged helix-turn-helix DNA-binding domain GO:0005737|GO:0045892|GO:0048037|GO:0051775 G3DSA:1.10.10.10|G3DSA:3.40.50.720|MF_01131|PF02629|PF06971|PTHR35786|PTHR35786:SF1|SM00881|SSF46785|SSF51735 PGJ_RS00100 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PTHR11820|SSF56529 PGJ_RS00105 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001769|IPR029030|IPR029031 Caspase-like domain|Gingipain|Gingipain, N-terminal GO:0006508|GO:0008234 G3DSA:3.40.50.10390|G3DSA:3.40.50.1460|PF01364|SSF52129 PGJ_RS00110 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic G3DSA:2.40.160.60|SSF56935 PGJ_RS00115 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003526|IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685|GO:0016114 G3DSA:3.30.1330.50|MF_00107|PF02542|PS01350|PTHR32125|SSF69765|TIGR00151 PGJ_RS00120 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001537|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.40.1280.10|PF00588|PTHR12029|PTHR12029:SF60|SSF75217 PGJ_RS00130 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002125|IPR006262|IPR016192|IPR016193 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase, homotetrameric|Cytidine deaminase-like GO:0003824|GO:0004126|GO:0008270|GO:0009972|GO:0016787 G3DSA:3.40.140.10|PF00383|PS00903|PTHR11644|SSF53927|TIGR01354 PGJ_RS00145 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006102|IPR008979|IPR013781|IPR013812|IPR017853 Galactose-binding domain-like|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich|Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 G3DSA:2.60.120.260|G3DSA:2.60.40.320|G3DSA:3.20.20.80|PF00703|PTHR10066|PTHR10066:SF12|SSF49303|SSF49785|SSF51445 PGJ_RS00150 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003798 DNA recombination RmuC PF02646|PTHR30563 PGJ_RS00155 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|PTHR10438|SSF52833|TIGR01068 PGJ_RS00160 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003141|IPR004013|IPR004805|IPR011708|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:1.10.150.280|G3DSA:3.20.20.140|PF02811|PF07733|PF14579|PTHR32294|PTHR32294:SF0|SM00481|SSF89550|TIGR00594 PGJ_RS00165 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001857|IPR008991|IPR018257 Ribosomal protein L19|Ribosomal protein L19, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00402|PF01245|PIRSF002191|PR00061|PS01015|PTHR15680|SSF50104|TIGR01024 PGJ_RS00170 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025668 Transposase DDE domain PF13701 PGJ_RS00180 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0003824|GO:0004372|GO:0006544|GO:0006563|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|PTHR11680|SSF53383 PGJ_RS00185 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011658|IPR013781|IPR015882|IPR015883|IPR017853|IPR025705|IPR026876|IPR029018 Beta-hexosaminidase|Beta-hexosaminidase, bacteial type, N-terminal|Chitobiase/beta-hexosaminidase domain 2-like|Fn3 associated repeat|Glycoside hydrolase family 20, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|PA14 domain GO:0004553|GO:0004563|GO:0005975 G3DSA:3.20.20.80|G3DSA:3.30.379.10|G3DSA:3.90.182.10|PF00728|PF02838|PF07691|PF13287|PR00738|PTHR22600|PTHR22600:SF21|SM00758|SSF51445|SSF55545 PGJ_RS00190 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001404|IPR003594|IPR019805|IPR020568|IPR020575 Heat shock protein Hsp90 family|Heat shock protein Hsp90, N-terminal|Heat shock protein Hsp90, conserved site|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold GO:0005524|GO:0006457|GO:0006950|GO:0051082 G3DSA:3.30.565.10|MF_00505|PF00183|PF02518|PIRSF002583|PR00775|PS00298|PTHR11528|SM00387|SSF54211|SSF55874 PGJ_RS00195 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 PF01148|PS01315|PTHR13773|PTHR13773:SF0 PGJ_RS00200 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|PTHR23076|PTHR23076:SF10|SM00382|SSF140990|SSF52540|TIGR01241 PGJ_RS00205 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain|Domain of unknown function DUF933|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|PTHR23305|SSF52540|SSF81271|TIGR00092 PGJ_RS00210 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR012337|IPR014736|IPR025399 Domain of unknown function DUF4372|Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609|PF14294|PTHR33258|PTHR33258:SF1|SSF53098 PGJ_RS00215 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS00220 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|SM00387|SSF47384|SSF55874 PGJ_RS00225 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001667|IPR003156|IPR004610 Bacterial RecJ exonuclease|DDH domain|DHHA1 domain GO:0003676|GO:0006281|GO:0006310|GO:0008409 PF01368|PF02272|PTHR30255|PTHR30255:SF2|SSF64182|TIGR00644 PGJ_RS00230 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007168 Phage shock protein, PspC, N-terminal PF04024 PGJ_RS00240 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002638|IPR006406|IPR007229 Nicotinate phosphoribosyltransferase|Nicotinate phosphoribosyltransferase family|Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0004516|GO:0009435|GO:0019357 G3DSA:3.20.140.10|MF_00570|PF04095|PIRSF000484|PTHR11098|PTHR11098:SF12|SSF51690|SSF54675|TIGR01514 PGJ_RS00245 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Probable nicotinate-nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|PTHR39321|SSF52374|TIGR00482 PGJ_RS00250 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011322|IPR018551 Domain of unknown function DUF2007|Nitrogen regulatory PII-like, alpha/beta PF09413|SSF54913 PGJ_RS00260 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003790|IPR017853 Glycoside hydrolase superfamily|Glycosyl hydrolase-like 10 PF02638|PTHR30032|PTHR30032:SF2|SSF51445 PGJ_RS00265 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003593|IPR003840|IPR010285|IPR011990|IPR019734|IPR027417|IPR027785 AAA+ ATPase domain|DNA helicase|DNA helicase Pif1-like|P-loop containing nucleoside triphosphate hydrolase|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|UvrD-like helicase C-terminal domain GO:0000723|GO:0003678|GO:0004386|GO:0005515|GO:0005524|GO:0006281 G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF05970|PF13181|PF13432|PF13538|PTHR23274|SM00028|SM00382|SSF48452|SSF52540 PGJ_RS00270 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|SSF56954 PGJ_RS00275 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF4|SSF82693|SSF82714|SSF82866|TIGR00914 PGJ_RS00280 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF5|SSF111369|TIGR01730 PGJ_RS00290 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000631|IPR004443|IPR029056|IPR030677 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Bifunctional NAD(P)H-hydrate repair enzyme Nnr|Ribokinase-like|YjeF N-terminal domain GO:0052855 G3DSA:3.40.1190.20|G3DSA:3.40.50.10260|MF_01965|MF_01966|PF01256|PF03853|PIRSF017184|PTHR12592|PTHR12592:SF0|SSF53613|SSF64153|TIGR00196|TIGR00197 PGJ_RS00295 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001451|IPR010137|IPR011004|IPR029098 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Trimeric LpxA-like|Udp N-acetylglucosamine O-acyltransferase, C-terminal GO:0008610|GO:0008780 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|PF00132|PF13720|PIRSF000456|PTHR23416|PTHR23416:SF8|SSF51161|TIGR01852 PGJ_RS00300 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004463|IPR010084|IPR011334|IPR013114|IPR015870|IPR020568|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain|Ribosomal protein S5 domain 2-type fold|UDP-3-O-acyl N-acetylglucosamine deacetylase|UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal|UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0005737|GO:0006633|GO:0008759|GO:0009245|GO:0016836 G3DSA:3.10.129.10|G3DSA:3.30.1700.10|G3DSA:3.30.230.20|MF_00406|PF03331|PF07977|PTHR30272|PTHR30272:SF1|SSF54211|SSF54637|TIGR01750 PGJ_RS00305 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001451|IPR007691|IPR011004|IPR020573 Hexapeptide repeat|Trimeric LpxA-like|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016410|GO:0016747 G3DSA:2.160.10.10|MF_00523|PF00132|PF04613|PTHR22572|PTHR22572:SF117|SSF51161|TIGR01853 PGJ_RS00310 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001754|IPR011060|IPR011995|IPR013785 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, type 2|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0006221|GO:0008152 G3DSA:3.20.20.70|MF_01215|PF00215|PTHR19278|PTHR19278:SF1|SM00934|SSF51366|TIGR02127 PGJ_RS00315 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000352|IPR004373|IPR005139|IPR014720 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00093|PF00472|PF03462|PS00745|PTHR11075|PTHR11075:SF9|SM00937|SSF75620|TIGR00019 PGJ_RS00320 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain G3DSA:3.30.1330.10|G3DSA:3.90.650.10|PF02769|PTHR10520|SSF55326|SSF56042 PGJ_RS00325 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002901|IPR018392 LysM domain|Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 G3DSA:3.10.350.10|PF01476|PF01832|SM00047|SM00257|SSF54106 PGJ_RS00330 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025591 RloB-like protein PF13707 PGJ_RS00335 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS00340 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS00345 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013784|IPR014766|IPR032812 Carbohydrate-binding-like fold|Carboxypeptidase, regulatory domain|SbsA, Ig-like domain GO:0030246 G3DSA:2.60.40.1120|PF13205|PF13620|SSF49452 PGJ_RS00350 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025112 Putative carbohydrate metabolism domain PF13201 PGJ_RS00355 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025665 Outer membrane protein beta-barrel domain PF13568 PGJ_RS00360 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004644|IPR005130|IPR005131|IPR029009 Allosteric substrate binding domain|Iron-sulphur-dependent L-serine dehydratase single chain form|Serine dehydratase beta chain|Serine dehydratase-like, alpha subunit GO:0003941|GO:0006094|GO:0051539 G3DSA:3.30.1330.90|PF03313|PF03315|PTHR30182|PTHR30182:SF1|SSF143548|TIGR00720 PGJ_RS00365 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002241|IPR013780|IPR013785|IPR017853 Aldolase-type TIM barrel|Glycoside hydrolase superfamily|Glycoside hydrolase, family 27|Glycosyl hydrolase, all-beta GO:0003824|GO:0004553|GO:0005975 G3DSA:2.60.40.1180|G3DSA:3.20.20.70|PF16499|PR00740|PTHR11452|SSF51445 PGJ_RS00370 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000629|IPR001650|IPR005580|IPR011545|IPR012677|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|DbpA, RNA-binding domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleotide-binding alpha-beta plait domain|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0003676|GO:0005524 G3DSA:3.30.70.330|G3DSA:3.40.50.300|PF00270|PF00271|PF03880|PS00039|PTHR24031|PTHR24031:SF261|SM00487|SM00490|SSF52540|SSF54928 PGJ_RS00375 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 G3DSA:3.40.50.10490|PF01380|PTHR38418|PTHR38418:SF1|SSF53697 PGJ_RS00380 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal GO:0003824|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PTHR11851|SSF63411 PGJ_RS00390 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002177|IPR008331|IPR009078|IPR012347|IPR023188 DNA-binding protein Dps|DNA-binding protein Dps, conserved site|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006879|GO:0006950|GO:0008199|GO:0016722|GO:0055114 G3DSA:1.20.1260.10|PF00210|PIRSF005900|PR01346|PS00818|PS00819|PTHR30295|PTHR30295:SF6|SSF47240 PGJ_RS00395 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic G3DSA:3.40.1710.10|PF12698|PTHR30294|PTHR30294:SF2 PGJ_RS00400 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic PF12698|PTHR30294|PTHR30294:SF12 PGJ_RS00405 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:2.40.50.100|PF13533|PF16576|PTHR30438|PTHR30438:SF1|SSF111369 PGJ_RS00410 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF6|SSF56954 PGJ_RS00420 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000432|IPR005748|IPR007695|IPR007696|IPR007860|IPR007861|IPR016151|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS, clamp|DNA mismatch repair protein MutS, connector domain|DNA mismatch repair protein MutS, core|DNA mismatch repair protein MutS, type 1|DNA mismatch repair protein MutS-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.30.420.110|G3DSA:3.40.1170.10|G3DSA:3.40.50.300|MF_00096|PF00488|PF01624|PF05188|PF05190|PF05192|PIRSF037677|PS00486|PTHR11361|PTHR11361:SF86|SM00533|SM00534|SSF48334|SSF52540|SSF53150|SSF55271|TIGR01070 PGJ_RS00425 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002876|IPR017856|IPR026563|IPR026564|IPR029072 Integrase, N-terminal zinc-binding domain-like|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 2|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.1270.10|G3DSA:3.30.70.980|MF_00693|PF01709|PTHR12532|PTHR12532:SF0|SSF75625|TIGR01033 PGJ_RS00430 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825 B3/B4 tRNA-binding domain|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding|Phenylalanine-tRNA ligase, class IIc, beta subunit|Phenylalanyl-tRNA synthetase, B3/B4|Putative DNA-binding domain|tRNA synthetase, B5-domain|tRNA-binding domain GO:0000049|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0008033 G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.56.20|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|PTHR10947|PTHR10947:SF0|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472 PGJ_RS00435 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS00440 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS00480 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000380|IPR003601|IPR003602|IPR005738|IPR006171|IPR013497|IPR013824|IPR013826|IPR023405 DNA topoisomerase III|DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 3|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|Toprim domain GO:0003677|GO:0003916|GO:0003917|GO:0006265 G3DSA:1.10.290.10|G3DSA:1.10.460.10|G3DSA:3.40.50.140|PF01131|PF01751|PR00417|PTHR11390|SM00436|SM00437|SM00493|SSF56712|TIGR01056 PGJ_RS00485 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012424 Conjugative transposon, TraJ, C-terminal PF07863 PGJ_RS00490 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000715|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016021 PF00953|PS01348|PTHR22926|PTHR22926:SF3 PGJ_RS00495 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028359 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0016616|GO:0016628|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|PTHR11374|PTHR11374:SF4|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 PGJ_RS00500 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF24|SSF53448 PGJ_RS00510 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 PGJ_RS00515 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic PTHR36932|PTHR36932:SF1|SSF56801 PGJ_RS00520 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR014541|IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase|Predicted amidinotransferase, FN0238 type G3DSA:3.75.10.10|PF02274|PIRSF028188|PTHR12737|PTHR12737:SF21|SSF55909 PGJ_RS00525 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SSF47729 PGJ_RS00530 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001451|IPR005881|IPR011004 Hexapeptide repeat|Serine O-acetyltransferase|Trimeric LpxA-like GO:0005737|GO:0006535|GO:0009001 G3DSA:2.160.10.10|PF00132|PIRSF000441|PTHR23416|PTHR23416:SF55|SSF51161 PGJ_RS00535 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008928|IPR012341 Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|SSF48208 PGJ_RS00540 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF24|SSF53448 PGJ_RS00545 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 PF03808|PTHR34136|PTHR34136:SF1|TIGR00696 PGJ_RS00550 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003331|IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like|UDP-N-acetylglucosamine 2-epimerase domain GO:0008761 G3DSA:3.40.50.2000|PF02350|PTHR18964|PTHR18964:SF2|SSF53756|TIGR00236 PGJ_RS00555 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025668 Transposase DDE domain PF13612 PGJ_RS00560 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000119|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|PTHR33175|SM00411|SSF47729 PGJ_RS00565 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 PGJ_RS00570 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000640|IPR001498|IPR020568|IPR023582 Impact family|Impact, N-terminal|Ribosomal protein S5 domain 2-type fold|Translation elongation factor EFG, V domain G3DSA:3.30.230.30|G3DSA:3.30.70.240|PF01205|PTHR16301|PTHR16301:SF0|SSF54211 PGJ_RS00575 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032574 Protein of unknown function DUF4924 PF16271 PGJ_RS00580 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002591|IPR017849|IPR017850|IPR024873 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Ectonucleotide pyrophosphatase/phosphodiesterase family|Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824|GO:0008152 G3DSA:3.40.720.10|PF01663|PTHR10151|SSF53649 PGJ_RS00585 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001015 Ferrochelatase GO:0004325|GO:0006783 G3DSA:3.40.50.1400|MF_00323|PF00762|PTHR11108|SSF53800|TIGR00109 PGJ_RS00590 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010440|IPR011009 Lipopolysaccharide kinase|Protein kinase-like domain GO:0005524|GO:0016020|GO:0016773 G3DSA:1.10.510.10|PF06293|SSF56112 PGJ_RS00595 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|PTHR12526:SF399|SSF53756 PGJ_RS00600 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001345|IPR005952|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase 1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0004619|GO:0006096|GO:0008152|GO:0016868 G3DSA:3.40.50.1240|MF_01039|PF00300|PS00175|PTHR11931|SM00855|SSF53254|TIGR01258 PGJ_RS00605 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic SSF53756 PGJ_RS00610 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PF14667 PGJ_RS00615 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000644|IPR006667|IPR006668|IPR006669 CBS domain|Magnesium transporter MgtE|Magnesium transporter, MgtE intracellular domain|SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|PTHR11911|PTHR11911:SF23|SM00116|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 PGJ_RS00620 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001737|IPR011530|IPR020596|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methylase transferase, conserved site|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PS01131|PTHR11727|SM00650|SSF53335|TIGR00755 PGJ_RS00625 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706 PGJ_RS00630 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001160|IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20C, Xaa-His dipeptidase GO:0006508|GO:0008152|GO:0016787 G3DSA:3.40.630.10|PF01546|PF07687|PIRSF016599|PR00934|PTHR11014|PTHR11014:SF54|SSF53187|TIGR01893 PGJ_RS00635 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001227|IPR004410|IPR014043|IPR016035|IPR016036|IPR020801|IPR024925 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl CoA-acyl carrier protein transacylase, FabD-type|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0004314|GO:0008152|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|PIRSF000446|PTHR10982|SM00827|SSF52151|SSF55048|TIGR00128 PGJ_RS00640 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000189|IPR008258|IPR018392|IPR023346 LysM domain|Lysozyme-like domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|G3DSA:3.10.350.10|PF01464|PF01476|PS00922|PTHR21666|PTHR21666:SF178|SM00257|SSF53955|SSF54106 PGJ_RS00650 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003115|IPR004437 ParB/RepB/Spo0J partition protein family|ParB/Sulfiredoxin GO:0003677 G3DSA:3.90.1530.10|PF02195|PTHR33375|PTHR33375:SF1|SM00470|SSF109709|SSF110849|TIGR00180 PGJ_RS00655 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PTHR13696|PTHR13696:SF52|SSF52540 PGJ_RS00660 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PTHR23088|PTHR23088:SF11|SSF56317 PGJ_RS00665 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 G3DSA:3.75.10.10|PF04371|PTHR31377|PTHR31377:SF0|SSF55909 PGJ_RS00670 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840|TIGR00810 PGJ_RS00680 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PF04390 PGJ_RS00685 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002078|IPR002197|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|PTHR32071:SF23|SM00382|SSF46689|SSF52540 PGJ_RS00695 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005839|IPR005840|IPR006638|IPR007197|IPR012340|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Nucleic acid-binding, OB-fold|Radical SAM|Radical SAM, alpha/beta horseshoe|Ribosomal protein S12 methylthiotransferase RimO GO:0003824|GO:0005737|GO:0009451|GO:0016740|GO:0018339|GO:0043412|GO:0051536|GO:0051539 G3DSA:2.40.50.140|G3DSA:3.80.30.20|MF_01865|PF00919|PF04055|PS01278|PTHR11918|PTHR11918:SF57|SM00729|SSF102114|TIGR00089|TIGR01125 PGJ_RS00700 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000897|IPR003593|IPR004390|IPR013822|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY GO:0005525|GO:0006614 G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02881|PS00300|PTHR11564|PTHR11564:SF16|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064 PGJ_RS00705 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005730|IPR009006|IPR022643|IPR022644|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Carboxynorspermidine decarboxylase|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|PLP-binding barrel GO:0003824 G3DSA:2.40.37.10|G3DSA:3.20.20.10|PF00278|PF02784|PIRSF038941|PTHR11482|PTHR11482:SF38|SSF50621|SSF51419|TIGR01047 PGJ_RS00710 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR018150|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Aspartate-tRNA ligase, bacterial/mitochondrial-type|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.1360.30|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|PTHR22594|PTHR22594:SF5|SSF50249|SSF55261|SSF55681|TIGR00459 PGJ_RS00715 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002125|IPR002734|IPR004794|IPR016192|IPR016193|IPR024072 APOBEC/CMP deaminase, zinc-binding|Bacterial bifunctional deaminase-reductase, C-terminal|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like|Dihydrofolate reductase-like domain|Riboflavin biosynthesis protein RibD GO:0003824|GO:0008270|GO:0008703|GO:0008835|GO:0009231|GO:0016787|GO:0055114 G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|PS00903|PTHR11079|PTHR11079:SF10|SSF53597|SSF53927|TIGR00326 PGJ_RS00720 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002052|IPR004556|IPR019874|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:1.10.8.10|G3DSA:3.40.50.150|PF13649|PS00092|PTHR18895|PTHR18895:SF64|SSF53335|TIGR00536|TIGR03534 PGJ_RS00725 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003783|IPR011991 Regulatory protein RecX|Winged helix-turn-helix DNA-binding domain GO:0006282 G3DSA:1.10.10.10|MF_01114|PF02631|PTHR33602 PGJ_RS00730 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR11907|PTHR11907:SF9|SSF53271 PGJ_RS00735 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000718|IPR008753|IPR018497|IPR024079 Metallopeptidase, catalytic domain|Peptidase M13|Peptidase M13, C-terminal domain|Peptidase M13, N-terminal domain GO:0004222|GO:0006508|GO:0008237 G3DSA:3.40.390.10|PF01431|PF05649|PR00786|PTHR11733|PTHR11733:SF65|SSF55486 PGJ_RS00740 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|SSF53448 PGJ_RS00745 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 PGJ_RS00750 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000023|IPR011183|IPR013981|IPR022953 ATP-dependent 6-phosphofructokinase|Phosphofructokinase domain|Pyrophosphate-dependent phosphofructokinase PfpB|Pyrophosphate-dependent phosphofructokinase, alpha-helical domain GO:0003872|GO:0005524|GO:0006002|GO:0006096|GO:0047334 G3DSA:1.10.10.480|G3DSA:3.40.50.450|MF_01980|PF00365|PIRSF005677|PR00476|PTHR13697|PTHR13697:SF2|SSF53784|TIGR02477 PGJ_RS00755 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR015018 Protein of unknown function DUF1905 G3DSA:2.40.30.100|PF08922|SSF141694 PGJ_RS00760 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002942|IPR025708 Heat shock protein 15|RNA-binding S4 domain GO:0003677|GO:0003723|GO:0003727|GO:0034605|GO:0043023 G3DSA:3.10.290.10|PF01479|PIRSF016821|SM00363|SSF55174 PGJ_RS00765 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001328|IPR018171 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01195|PS01196|PTHR17224|PTHR17224:SF1|SSF53178|TIGR00447 PGJ_RS00770 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001021|IPR011035|IPR020056|IPR020057|IPR029751 Ribosomal protein L25|Ribosomal protein L25, beta domain|Ribosomal protein L25, long-form|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain GO:0003735|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.170.120.20|G3DSA:2.40.240.10|MF_01334|PD012503|PF01386|PF14693|PTHR33284|SSF50715|TIGR00731 PGJ_RS00775 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001412|IPR002547|IPR004495|IPR009080|IPR012340|IPR014729|IPR014758|IPR015413|IPR023458|IPR029038 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Methionine-tRNA ligase, type 1|Methionyl-tRNA synthetase|Methionyl-tRNA synthetase, Zn-domain|Methionyl-tRNA synthetase, beta subunit, C-terminal|Methionyl/Leucyl tRNA synthetase|Nucleic acid-binding, OB-fold|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-binding domain GO:0000049|GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.20.28.20|G3DSA:2.40.50.140|G3DSA:3.40.50.620|MF_00098|PF01588|PF09334|PR01041|PS00178|PTHR11946|PTHR11946:SF72|SSF47323|SSF50249|SSF52374|SSF57770|TIGR00398|TIGR00399 PGJ_RS00785 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012337|IPR013520 Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF00929|SM00479|SSF53098 PGJ_RS00790 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF13463|SM00347|SSF46785 PGJ_RS00795 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001455|IPR001763|IPR004099|IPR016156|IPR023753|IPR027396|IPR032836 DsrE/DsrF/DrsH-like family|DsrEFH-like|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Rhodanese-like domain|TusA-like domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.110.40|G3DSA:3.30.390.30|G3DSA:3.40.1260.10|G3DSA:3.40.250.10|G3DSA:3.50.50.60|PF00581|PF01206|PF02852|PF07992|PF13686|PR00368|PR00411|PS01148|PTHR22912|PTHR22912:SF140|SM00450|SSF51905|SSF52821|SSF55424|SSF64307|SSF75169 PGJ_RS00805 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS00810 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS00820 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029140|IPR029141 Major fimbrial subunit protein, C-terminal|Major fimbrial subunit protein, N-terminal PF06321|PF15495 PGJ_RS00825 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR014941 Fimbrillin-A associated anchor protein Mfa1/Mfa2 PF08842 PGJ_RS00830 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029141 Major fimbrial subunit protein, N-terminal PF06321 PGJ_RS00835 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029141 Major fimbrial subunit protein, N-terminal PF06321 PGJ_RS00840 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF13519|PTHR10579|SM00327|SSF53300|SSF69304 PGJ_RS00855 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR008969|IPR012910|IPR014766|IPR023996|IPR023997 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent outer membrane protein SusC/RagA, conserved site|TonB-dependent outer membrane protein, SusC/RagA|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF07715|PF13715|PTHR11532|PTHR11532:SF57|SSF49464|SSF56935|TIGR04056|TIGR04057 PGJ_RS00860 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR012944 RagB/SusD domain|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF07980|PF14322|SSF48452 PGJ_RS00865 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|G3DSA:2.130.10.140|SSF110296 PGJ_RS00870 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 PGJ_RS00875 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|PTHR10291|SSF64005|TIGR00055 PGJ_RS00880 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010827|IPR023707 Outer membrane protein assembly factor BamA|Surface antigen variable number GO:0019867|GO:0071709 G3DSA:2.40.160.50|PF07244|PIRSF006076|PTHR12815|PTHR12815:SF11 PGJ_RS00885 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|PTHR35089|PTHR35089:SF1|SM00935|SSF111384 PGJ_RS00890 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|PTHR35089|SM00935|SSF111384 PGJ_RS00895 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003251|IPR004039|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Rubredoxin-type fold|Rubrerythrin GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1260.10|G3DSA:2.20.28.10|PF02915|PTHR33746|PTHR33746:SF1|SSF47240|SSF57802 PGJ_RS00900 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|PTHR11851|PTHR11851:SF144|SSF63411 PGJ_RS00905 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008523 Protein of unknown function DUF805 GO:0016021 PF05656|PTHR34980 PGJ_RS00910 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001130|IPR032466 Metal-dependent hydrolase|TatD family GO:0016788 G3DSA:3.20.20.140|PF01026|PTHR10060|SSF51556 PGJ_RS00915 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000100|IPR014721|IPR020539|IPR020568 Ribonuclease P|Ribonuclease P, conserved site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|MF_00227|PF00825|PS00648|SSF54211|TIGR00188 PGJ_RS00920 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 G3DSA:3.40.50.10090|PF02602|PTHR12390|SSF69618 PGJ_RS00925 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025367 Protein of unknown function DUF4271 PF14093 PGJ_RS00935 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000795|IPR004548|IPR005225|IPR009000|IPR009022|IPR027417|IPR031157|IPR032090 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Peptide chain release factor 3|Peptide chain release factor 3, C-terminal|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation protein, beta-barrel domain GO:0003924|GO:0005525|GO:0005737|GO:0006415|GO:0016149 G3DSA:2.40.30.10|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00072|PF00009|PF16658|PR00315|PS00301|PTHR23115|PTHR23115:SF69|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR00503 PGJ_RS00940 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000292|IPR023271|IPR024002 Aquaporin-like|Formate/nitrite transporter|Formate/nitrite transporter, conserved site GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF01226|PS01005|PS01006|PTHR30520|PTHR30520:SF0|TIGR00790 PGJ_RS00945 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002748|IPR003723 Cobalt-precorrin-5B C(1)-methyltransferase CbiD|Precorrin-6x reductase GO:0008168|GO:0009236|GO:0016994|GO:0055114 G3DSA:3.30.2110.10|MF_00787|PF01888|PF02571|PTHR35863|PTHR35863:SF1|SSF111342 PGJ_RS00950 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000878|IPR002750|IPR003043|IPR006362|IPR014776|IPR014777|IPR021744|IPR021745 CobE/GbiG C-terminal domain|Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase|Cobalamin biosynthesis central region|Cobalamin synthesis G, N-terminal|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site GO:0008152|GO:0008168|GO:0009236|GO:0046026|GO:0055114 G3DSA:3.30.420.180|G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PF01890|PF11760|PF11761|PS00840|PTHR21091|PTHR21091:SF17|SSF159664|SSF159672|SSF53790|TIGR01465 PGJ_RS00965 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000878|IPR006365|IPR012818|IPR014008|IPR014776|IPR014777|IPR029063 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase|Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase|Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit|S-adenosyl-L-methionine-dependent methyltransferase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0008276|GO:0009236 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.150|PF00590|PIRSF036428|PTHR14741|PTHR14741:SF34|SSF53335|SSF53790|TIGR02467|TIGR02469 PGJ_RS00970 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000878|IPR003722|IPR006363|IPR014422|IPR014776|IPR014777 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase|Cobalamin (vitamin B12) biosynthesis, bifunctional CbiH/CbiC|Precorrin-3B C17-methyltransferase domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0009236|GO:0016993 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.10230|PF00590|PF02570|PIRSF004874|PTHR32439|PTHR32439:SF1|SSF53790|SSF63965|TIGR01466 PGJ_RS00975 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 PGJ_RS00985 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025348 Protein of unknown function DUF4252 PF14060 PGJ_RS01000 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic G3DSA:2.20.110.10|SSF82185 PGJ_RS01005 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000119|IPR005902|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|PF00216|SSF47729|TIGR01201 PGJ_RS01010 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012337|IPR013520|IPR033390 3'-5' exoribonuclease Rv2179c-like domain|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF16473|PTHR30231|PTHR30231:SF10|SM00479|SSF53098 PGJ_RS01015 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|PTHR33508 PGJ_RS01020 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002931 Transglutaminase-like PF01841|PTHR35532|PTHR35532:SF3|SM00460|SSF54001 PGJ_RS01025 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003593|IPR004504|IPR014721|IPR020568|IPR027417 AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF13481|PF13541|PR01874|PTHR32472|PTHR32472:SF10|SM00382|SSF52540|SSF54211|TIGR00416 PGJ_RS01030 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase G3DSA:3.75.10.10|PF02274|PTHR12737|SSF55909 PGJ_RS01035 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008969|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain G3DSA:2.60.40.1120|SSF49464|SSF56935 PGJ_RS01040 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005901 GLPGLI family protein PF09697|TIGR01200 PGJ_RS01045 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012456 Protein of unknown function DUF1661 PF07877 PGJ_RS01050 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001585|IPR004731|IPR013785|IPR018225|IPR022999 Aldolase-type TIM barrel|Transaldolase type 3B, putative|Transaldolase type 3B/Fructose-6-phosphate aldolase|Transaldolase, active site|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0004801|GO:0005975 G3DSA:3.20.20.70|MF_00494|PF00923|PS00958|PS01054|PTHR10683|SSF51569|TIGR00875 PGJ_RS01055 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008302 Uncharacterised conserved protein UCP016719 PF07075|PIRSF016719|PTHR30480|PTHR30480:SF3 PGJ_RS01060 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000601|IPR000834|IPR008969|IPR014766|IPR022409|IPR026444 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|PKD domain|PKD/Chitinase domain|Peptidase M14, carboxypeptidase A|Secretion system C-terminal sorting domain GO:0004181|GO:0006508|GO:0008270 G3DSA:2.60.40.1120|G3DSA:2.60.40.670|G3DSA:3.40.630.10|PF00246|PF00801|PF13620|PR00765|PS00133|PTHR11532|PTHR11532:SF54|SM00089|SM00631|SSF49299|SSF49464|SSF53187|TIGR04183 PGJ_RS01075 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.90.226.10|PF03572|PF13180|PTHR32060|PTHR32060:SF9|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 PGJ_RS01080 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011050|IPR012334 Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|SSF51126 PGJ_RS01085 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002043|IPR005122|IPR018085 Uracil-DNA glycosylase|Uracil-DNA glycosylase, active site|Uracil-DNA glycosylase-like GO:0004844|GO:0006281|GO:0006284|GO:0016799 G3DSA:3.40.470.10|MF_00148|PF03167|PS00130|PTHR11264|SM00986|SM00987|SSF52141|TIGR00628 PGJ_RS01090 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006439|IPR011951|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR12725|PTHR12725:SF57|SSF56784|TIGR01549|TIGR02254 PGJ_RS01100 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000878|IPR008189|IPR014776|IPR014777|IPR018063 SAM-dependent methyltransferase RsmI, conserved site|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|PS01296|PTHR21091|PTHR21091:SF18|SSF53790|TIGR00096 PGJ_RS01115 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006015|IPR006016|IPR014729|IPR018551 Domain of unknown function DUF2007|Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PF09413|PR01438|PTHR31964|PTHR31964:SF45|SSF52402 PGJ_RS01130 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001950|IPR005872 Archaeal/bacterial translation initiation factor SUI1|Translation initiation factor SUI1 GO:0003743|GO:0006413 G3DSA:3.30.780.10|PF01253|PIRSF037511|SSF55159 PGJ_RS01135 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000891|IPR003379|IPR013785 Aldolase-type TIM barrel|Carboxylase, conserved domain|Pyruvate carboxyltransferase GO:0003824 G3DSA:3.20.20.70|PF00682|PF02436|PTHR18866|PTHR18866:SF33|SSF51569|SSF89000 PGJ_RS01145 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003728|IPR028989 Ribosome maturation factor RimP|Ribosome maturation factor RimP, N-terminal GO:0042274 G3DSA:3.30.300.70|MF_01077|PF02576|PTHR33867|PTHR33867:SF1|SSF75420 PGJ_RS01150 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009019|IPR010213|IPR012340|IPR013735|IPR015946|IPR025249|IPR030842 K homology domain, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination/antitermination protein NusA, bacterial GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF08529|PF13184|PTHR22648|PTHR22648:SF0|SSF50249|SSF54814|SSF69705|TIGR01953 PGJ_RS01155 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000178|IPR005225|IPR006847|IPR009000|IPR023115|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain GO:0003743|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF04760|PF11987|PS01176|PTHR23115|PTHR23115:SF184|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 PGJ_RS01160 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PF02674 PGJ_RS01165 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000825|IPR010231 SUF system FeS cluster assembly, SufB|SUF system FeS cluster assembly, SufBD GO:0016226 PF01458|PTHR30508|PTHR30508:SF1|SSF101960|TIGR01980 PGJ_RS01170 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR010230|IPR027417 AAA+ ATPase domain|ABC transporter-like|FeS cluster assembly SUF system, ATPase SufC|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF85|SM00382|SSF52540|TIGR01978 PGJ_RS01175 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000825|IPR011542 SUF system FeS cluster assembly, SufBD|SUF system FeS cluster assembly, SufD GO:0016226 PF01458|PTHR30508|PTHR30508:SF0|SSF101960|TIGR01981 PGJ_RS01180 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001412|IPR002305|IPR002307|IPR002942|IPR014729|IPR024088|IPR024107 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type|Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437 G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02006|PF00579|PR01040|PS00178|PTHR11766|PTHR11766:SF0|SSF52374|SSF55174|TIGR00234 PGJ_RS01185 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13641|PTHR22916|PTHR22916:SF9|SSF53448 PGJ_RS01190 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|PTHR11956|PTHR11956:SF6|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456 PGJ_RS01195 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004506|IPR014729|IPR023382 Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740|GO:0016783 G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|MF_00144|PF03054|PTHR11933|PTHR11933:SF5|SSF52402|TIGR00420 PGJ_RS01200 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004808|IPR005135|IPR020847|IPR020848 AP endonuclease 1|AP endonuclease 1, binding site|AP endonuclease 1, conserved site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00726|PS00727|PTHR22748|SSF56219|TIGR00195|TIGR00633 PGJ_RS01205 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30419|PTHR30419:SF4|SSF46785|SSF53850 PGJ_RS01210 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PIRSF002070|PTHR10302|SSF50249|TIGR00621 PGJ_RS01215 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000644|IPR002550|IPR005170|IPR016166|IPR016169|IPR019862 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Domain of unknown function DUF21|FAD-binding, type 2|Gliding motility-associated protein GldE|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|PTHR22777|SM01091|SSF54631|SSF56176|TIGR03520 PGJ_RS01220 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 G3DSA:3.90.470.20|PF01648|SSF56214 PGJ_RS01225 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PR00421|PS00194|PTHR10438|SSF52833 PGJ_RS01230 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PTHR41368|SSF55729 PGJ_RS01235 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003593|IPR006083|IPR018163|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase/uridine kinase|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0005524|GO:0008152|GO:0016301 G3DSA:3.30.980.10|G3DSA:3.40.50.300|PF00485|PTHR10285|PTHR10285:SF45|SM00382|SSF52540|SSF55186 PGJ_RS01240 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006218|IPR006269|IPR013785 3-deoxy-8-phosphooctulonate synthase|Aldolase-type TIM barrel|DAHP synthetase I/KDSA GO:0003824|GO:0005737|GO:0008152|GO:0008676|GO:0009058 G3DSA:3.20.20.70|PF00793|PTHR21057|PTHR21057:SF2|SSF51569|TIGR01362 PGJ_RS01245 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000362|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0006099|GO:0016829 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10415|PR00149|PS00163|PTHR11444|PTHR11444:SF25|SSF48557 PGJ_RS01250 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003695 Ppx/GppA phosphatase G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF02541|PTHR30005|SSF53067 PGJ_RS01255 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000326|IPR026841 Inositolphosphotransferase Aur1/Ipt1|Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF14378|SSF48317 PGJ_RS01260 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000600 ROK family G3DSA:3.30.420.40|PF00480|PS01125|PTHR18964|PTHR18964:SF123|SSF53067 PGJ_RS01265 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|PTHR22769|PTHR22769:SF37|SSF55811 PGJ_RS01275 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016097 Domain of unknown function DUF695 PF05117 PGJ_RS01280 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF5|SSF56349 PGJ_RS01285 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001874|IPR018509 Dehydroquinase, class II|Dehydroquinase, class II, conserved site GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|PS01029|PTHR21272|SSF52304 PGJ_RS01290 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002935|IPR029063 O-methyltransferase, family 3|S-adenosyl-L-methionine-dependent methyltransferase GO:0008171 G3DSA:3.40.50.150|PF01596|PTHR10509|PTHR10509:SF14|SSF53335 PGJ_RS01295 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002065|IPR012336|IPR013740|IPR018219 Putative thiol peroxidase Tpx|Redoxin|Thiol peroxidase conserved site|Thioredoxin-like fold GO:0008379|GO:0016209|GO:0016491|GO:0016684|GO:0055114 G3DSA:3.40.30.10|MF_00269|PF08534|PS01265|PTHR10681|PTHR10681:SF81|SSF52833 PGJ_RS01300 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002125|IPR016193 Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like GO:0003824|GO:0008270 G3DSA:3.40.140.10|PF00383|PTHR11079|PTHR11079:SF25|SSF53927 PGJ_RS01305 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR014464 Conserved virulence factor B PF13509|PIRSF012524|PTHR37296 PGJ_RS01310 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001478|IPR025411 Domain of unknown function DUF4136|PDZ domain GO:0005515 G3DSA:2.30.42.10|PF00595|PF13180|PF13590|SM00228|SSF50156 PGJ_RS01315 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008136 CinA, C-terminal G3DSA:3.90.950.20|PF02464|PTHR13939|SSF142433|TIGR00199 PGJ_RS01320 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000905|IPR017860|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|Peptidase M22, conserved site|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|PS01016|PTHR11735|PTHR11735:SF6|SSF53067|TIGR00329|TIGR03723 PGJ_RS01330 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|PTHR33398|SSF46992|TIGR00029 PGJ_RS01340 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003029|IPR004476|IPR011805|IPR012340|IPR013223|IPR022966|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease B, N-terminal OB domain|Ribonuclease II/R, conserved site|Ribonuclease II/ribonuclease R|Ribonuclease R|S1 domain GO:0003676|GO:0003723|GO:0004518|GO:0004540|GO:0016070 G3DSA:2.40.50.140|MF_01895|PF00575|PF00773|PF08206|PS01175|PTHR23355|PTHR23355:SF9|SM00316|SM00955|SSF50249|TIGR00358|TIGR02063 PGJ_RS01345 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004993 GH3 family PF03321|PTHR31901|PTHR31901:SF5 PGJ_RS01350 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 PGJ_RS01355 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008969|IPR012910|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.60.40.1120|PF13715|PF14905|PTHR30069|PTHR30069:SF12|SSF49464|SSF56935 PGJ_RS01360 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000659|IPR011576|IPR012349|IPR019576|IPR019740 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase|Pyridoxamine 5'-phosphate oxidase, conserved site|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain|Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0004733|GO:0008615|GO:0010181|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.30.110.10|MF_01629|PF01243|PF10590|PIRSF000190|PS01064|PTHR10851|PTHR10851:SF0|SSF50475|TIGR00558 PGJ_RS01365 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 PGJ_RS01370 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005887|IPR008928|IPR012939|IPR014718 Alpha-1,2-mannosidase, putative|Glycoside hydrolase-type carbohydrate-binding, subgroup|Glycosyl hydrolase family 92|Six-hairpin glycosidase-like GO:0003824|GO:0005975|GO:0030246 G3DSA:1.20.1050.60|G3DSA:1.20.1610.10|G3DSA:2.70.98.10|G3DSA:3.30.2080.10|PF07971|PTHR12143|PTHR12143:SF22|SSF48208|TIGR01180 PGJ_RS01375 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005887|IPR008928|IPR012939|IPR014718 Alpha-1,2-mannosidase, putative|Glycoside hydrolase-type carbohydrate-binding, subgroup|Glycosyl hydrolase family 92|Six-hairpin glycosidase-like GO:0003824|GO:0005975|GO:0030246 G3DSA:1.20.1050.60|G3DSA:1.20.1610.10|G3DSA:2.70.98.10|G3DSA:3.30.2080.10|PF07971|PTHR12143|PTHR12143:SF22|SSF48208|TIGR01180 PGJ_RS01380 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS01385 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS01390 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 G3DSA:3.30.70.100|PF00403|SSF55008 PGJ_RS01395 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001757|IPR006121|IPR008250|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|Heavy metal-associated domain, HMA|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00943|PS00154|PTHR24093|PTHR24093:SF50|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01525 PGJ_RS01400 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR017867|IPR023485 Phosphotyrosine protein phosphatase I superfamily|Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 G3DSA:3.40.50.270|PF01451|PR00719|PTHR11717|PTHR11717:SF7|SM00226|SSF52788 PGJ_RS01405 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PTHR11206|PTHR11206:SF94|TIGR00797 PGJ_RS01410 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000866|IPR012336|IPR025380 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Domain of unknown function DUF4369|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PF14289|PTHR13871|SSF52833 PGJ_RS01415 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002543|IPR011991|IPR018541|IPR025199|IPR027417 DNA translocase FtsK, 4TM region|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003677|GO:0005524 G3DSA:3.40.50.300|PF01580|PF09397|PF13491|PTHR22683|PTHR22683:SF41|SM00843|SSF46785|SSF52540 PGJ_RS01420 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004564|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein carrier protein LolA-like PF16584|SSF89392 PGJ_RS01430 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000705|IPR006203|IPR006204|IPR006206|IPR013750|IPR014721|IPR019539|IPR019741|IPR020568 GHMP kinase N-terminal domain|GHMP kinase, ATP-binding, conserved site|GHMP kinase, C-terminal domain|Galactokinase|Galactokinase galactose-binding domain|Galactokinase, conserved site|Mevalonate/galactokinase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004335|GO:0005524|GO:0005737|GO:0006012|GO:0008152|GO:0016301|GO:0016773|GO:0046835 G3DSA:3.30.230.10|G3DSA:3.30.70.890|PF00288|PF10509|PIRSF000530|PR00473|PR00959|PS00106|PS00627|PTHR10457|PTHR10457:SF6|SSF54211|SSF55060|TIGR00131 PGJ_RS01435 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008183|IPR011013|IPR014718|IPR015443|IPR018052 Aldose 1-/Glucose-6-phosphate 1-epimerase|Aldose 1-epimerase|Aldose 1-epimerase, conserved site|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0016853|GO:0019318|GO:0030246 G3DSA:2.70.98.10|PF01263|PIRSF005096|PS00545|PTHR10091|PTHR10091:SF0|SSF74650 PGJ_RS01450 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic G3DSA:2.40.160.60|SSF56935 PGJ_RS01465 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007329|IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain|FMN-binding GO:0010181|GO:0016020 PF04205|PF12801|PTHR30224|SM00900 PGJ_RS01470 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002205|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 G3DSA:3.30.1360.40|G3DSA:3.90.199.10|PF00521|PTHR10169|PTHR10169:SF48|SM00434|SSF56719 PGJ_RS01475 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016879 Uncharacterised conserved protein UCP028299 PF11777 PGJ_RS01480 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005151|IPR029045 ClpP/crotonase-like domain|Tail specific protease GO:0006508|GO:0008236 G3DSA:3.90.226.10|PF03572|PTHR11261|PTHR11261:SF2|SM00245|SSF52096 PGJ_RS01485 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011814|IPR029063 Malonyl-[acyl-carrier protein] O-methyltransferase BioC|S-adenosyl-L-methionine-dependent methyltransferase GO:0009102|GO:0010340 G3DSA:3.40.50.150|MF_00835|PF13489|PTHR10108|PTHR10108:SF806|SSF53335|TIGR02072 PGJ_RS01490 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007398|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF452 PF04301|SSF53474 PGJ_RS01495 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001736|IPR022924|IPR025202|IPR027379|IPR030874 Cardiolipin synthase|Cardiolipin synthase N-terminal|Cardiolipin synthase, Firmicutes-type|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824|GO:0008808|GO:0016780|GO:0032049 G3DSA:3.30.870.10|MF_01916|PF13091|PF13396|PTHR21248|PTHR21248:SF5|SM00155|SSF56024|TIGR04265 PGJ_RS01500 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002912|IPR003607|IPR004095|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|TGS|TGS-like GO:0008152|GO:0015969|GO:0016597 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|PTHR21262|PTHR21262:SF0|SM00954|SSF109604|SSF81271|SSF81301 PGJ_RS01505 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13174|PF13432|PTHR23083|SM00028|SSF48452 PGJ_RS01510 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|SSF56935 PGJ_RS01515 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000150|IPR003736|IPR006379|IPR006683|IPR023214|IPR029069 Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain GO:0016787 G3DSA:3.10.129.10|G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF03061|PF08282|PTHR10000|PTHR10000:SF16|SSF54637|SSF56784|TIGR00099|TIGR00369|TIGR01484 PGJ_RS01520 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000755|IPR009045 D-alanyl-D-alanine dipeptidase|Hedgehog signalling/DD-peptidase zinc-binding domain GO:0005618|GO:0006508|GO:0008237|GO:0016805 G3DSA:3.30.1380.10|MF_01924|PF01427|PIRSF026671|PTHR22935|PTHR22935:SF81|SSF55166 PGJ_RS01535 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000119|IPR005902|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|PF00216|SSF47729|TIGR01201 PGJ_RS01540 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026444 Secretion system C-terminal sorting domain SSF69304|TIGR04183 PGJ_RS01545 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004608|IPR006099|IPR006158|IPR014348|IPR016176 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-dependent enzyme, catalytic|Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain|Methylmalonyl-CoA mutase, alpha/beta chain, catalytic|Methylmalonyl-CoA mutase, beta chain GO:0003824|GO:0004494|GO:0008152|GO:0016866|GO:0019652|GO:0031419|GO:0046872 G3DSA:3.20.20.240|G3DSA:3.40.50.280|PF01642|PS00544|PTHR23408|PTHR23408:SF15|SSF51703|SSF52242|TIGR00642 PGJ_RS01550 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006098|IPR006099|IPR006158|IPR006159|IPR014348|IPR016176 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-dependent enzyme, catalytic|Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain|Methylmalonyl-CoA mutase, C-terminal|Methylmalonyl-CoA mutase, alpha chain, catalytic|Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0003824|GO:0004494|GO:0008152|GO:0016853|GO:0016866|GO:0031419|GO:0046872 G3DSA:3.20.20.240|G3DSA:3.40.50.280|PF01642|PF02310|PS00544|PTHR23408|PTHR23408:SF1|SSF51703|SSF52242|TIGR00640|TIGR00641 PGJ_RS01565 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF8|SSF88659|SSF88946|TIGR02937 PGJ_RS01575 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF86|SM00382|SSF52540 PGJ_RS01580 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30572 PGJ_RS01585 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30572 PGJ_RS01590 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR32347|PTHR32347:SF14|SSF111369|TIGR01730 PGJ_RS01595 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF4|SSF56954 PGJ_RS01640 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001272|IPR008210|IPR013035|IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site|Phosphoenolpyruvate carboxykinase, ATP-utilising|Phosphoenolpyruvate carboxykinase, C-terminal|Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0004612|GO:0005524|GO:0006094|GO:0017076 G3DSA:3.40.449.10|G3DSA:3.90.228.20|MF_00453|PF01293|PIRSF006294|PS00532|PTHR30031|PTHR30031:SF0|SSF53795|SSF68923|TIGR00224 PGJ_RS01645 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001576|IPR015824|IPR015901 Phosphoglycerate kinase|Phosphoglycerate kinase, C-terminal|Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 G3DSA:3.40.50.1260|G3DSA:3.40.50.1270|MF_00145|PF00162|PIRSF000724|PR00477|PTHR11406|SSF53748 PGJ_RS01655 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 PGJ_RS01660 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008928|IPR010401|IPR024742|IPR032790 Glycogen debranching enzyme|Glycogen debranching enzyme, C-terminal|Glycogen debranching enzyme, bacterial and archaeal type, N-terminal|Six-hairpin glycosidase-like GO:0003824|GO:0004134|GO:0004135|GO:0005980 PF06202|PF12439|PTHR10569|SSF48208 PGJ_RS01665 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 PGJ_RS01670 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004300|IPR011330|IPR027291 Glycoside hydrolase 38/57, N-terminal domain|Glycoside hydrolase family 57, N-terminal domain|Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 G3DSA:3.20.110.10|PF03065|SSF88713 PGJ_RS01680 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001310|IPR011146 HIT-like domain|Histidine triad (HIT) protein GO:0003824 G3DSA:3.30.428.10|PF01230|PR00332|PTHR23089|SSF54197 PGJ_RS01685 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001437|IPR006359|IPR018151|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|PTHR30437|SSF46557|SSF54534|TIGR01462 PGJ_RS01690 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|PTHR17490|PTHR17490:SF7|SSF55821|TIGR00057 PGJ_RS01695 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010994|IPR023097 RuvA domain 2-like|Tex RuvX-like domain G3DSA:1.10.150.310|PF12836|PTHR21180|PTHR21180:SF32|SSF47781 PGJ_RS01700 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF111|SM00382|SSF52540 PGJ_RS01705 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|PTHR10953|PTHR10953:SF145|SSF69572 PGJ_RS01710 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003770|IPR013087 Uncharacterised protein family UPF0755, YceG-like|Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 G3DSA:3.30.160.60|PF02618|PTHR30518|PTHR30518:SF2|TIGR00247 PGJ_RS01720 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002052|IPR006935|IPR011639|IPR014001|IPR027417|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction modification methylase Eco57I|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0003824|GO:0005524|GO:0006304|GO:0008168|GO:0016787|GO:0032259 G3DSA:3.40.50.150|G3DSA:3.40.50.300|PF04851|PF07669|PS00092|SM00487|SSF52540|SSF53335 PGJ_RS01725 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008257|IPR011697|IPR029062|IPR032466 Class I glutamine amidotransferase-like|Metal-dependent hydrolase|Peptidase C26|Renal dipeptidase family GO:0006508|GO:0006541|GO:0016787|GO:0016805 G3DSA:3.20.20.140|G3DSA:3.40.50.880|PF01244|PF07722|PTHR10443|SSF51556|SSF52317 PGJ_RS01730 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|PTHR10169|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 PGJ_RS01735 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004518|IPR011551 NTP pyrophosphohydrolase MazG|NTP pyrophosphohydrolase MazG, putative catalytic core G3DSA:1.10.287.1080|PF03819|PTHR30522|PTHR30522:SF0|SSF101386|TIGR00444 PGJ_RS01740 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003834|IPR012336|IPR022910|IPR028250 Cytochrome C biogenesis protein, transmembrane domain|Thiol:disulfide interchange protein DsbD, N-terminal domain|Thiol:disulphide interchange protein DsbD|Thioredoxin-like fold GO:0016020|GO:0017004|GO:0047134|GO:0055114 G3DSA:2.60.40.1250|G3DSA:3.40.30.10|PF02683|PF11412|PF13899|PTHR32234|PTHR32234:SF0|SSF52833 PGJ_RS01745 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002942|IPR006145|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PTHR11079|PTHR11079:SF73|SSF55120|SSF55174 PGJ_RS01755 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PF04977 PGJ_RS01760 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS01765 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS01775 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011138 Succinate dehydrogenase cytochrome b558 subunit G3DSA:1.20.950.10|SSF81343|TIGR02046 PGJ_RS01780 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003953|IPR011280|IPR015939|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PF02910|PR00368|PTHR11632|PTHR11632:SF53|SSF46977|SSF51905|SSF56425|TIGR01811 PGJ_RS01785 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001041|IPR006058|IPR009051|IPR012675|IPR017896|IPR025192 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Beta-grasp domain|Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536|GO:0051537 G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF12838|PF13085|PS00197|PTHR11921|PTHR11921:SF13|SSF46548|SSF54292 PGJ_RS01790 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR017515|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Methylmalonyl-CoA epimerase G3DSA:3.10.180.10|PF13669|PTHR21366|PTHR21366:SF0|SSF54593|TIGR03081 PGJ_RS01795 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000022|IPR029045 Carboxyl transferase|ClpP/crotonase-like domain G3DSA:3.90.226.10|PF01039|PTHR22855|PTHR22855:SF14|SSF52096 PGJ_RS01800 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001322|IPR005899 Lamin Tail Domain|Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 PF00932|PF04277|SSF74853 PGJ_RS01810 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000089|IPR001882|IPR011053 Biotin-binding site|Biotin/lipoyl attachment|Single hybrid motif G3DSA:2.40.50.100|PF00364|PS00188|PTHR18866|SSF51230 PGJ_RS01815 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 PF03977|PIRSF015658|PTHR35806|TIGR01109 PGJ_RS01820 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005821|IPR027359|IPR028325 Ion transport domain|Voltage-dependent channel, four helix bundle domain|Voltage-gated potassium channel GO:0005216|GO:0005249|GO:0006811|GO:0006813|GO:0008076|GO:0016020|GO:0055085 G3DSA:1.10.287.70|G3DSA:1.20.120.350|G3DSA:1.20.5.110|PF00520|PR00169|PTHR11537|PTHR11537:SF14|SSF81324 PGJ_RS01825 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000169|IPR004134 Cysteine peptidase, cysteine active site|Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 G3DSA:3.90.70.10|PF03051|PIRSF005700|PS00139|PTHR10363|PTHR10363:SF4|SSF54001 PGJ_RS01830 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011042 Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|SSF101898 PGJ_RS01835 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002637|IPR020922|IPR029001 Ham1-like protein|Inosine triphosphate pyrophosphatase-like|Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0016787|GO:0017111 G3DSA:3.90.950.10|MF_01405|PF01725|PTHR11067|PTHR11067:SF9|SSF52972|TIGR00042 PGJ_RS01840 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007351 Uncharacterised protein YjbR PF04237|PTHR35145|SSF142906 PGJ_RS01845 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004143|IPR004408 Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0004077|GO:0006464 G3DSA:3.30.930.10|PF03099|PTHR12835|SSF55681|TIGR00121 PGJ_RS01850 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 PGJ_RS01855 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025381 Domain of unknown function DUF4296 PF14129 PGJ_RS01860 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|PTHR33695|PTHR33695:SF1 PGJ_RS01865 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PF01258|PTHR33823|SSF109635|SSF57716 PGJ_RS01870 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002300|IPR002301|IPR009008|IPR009080|IPR013155|IPR014729|IPR023586 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class Ia|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 2|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02003|PF00133|PF08264|PR00984|PTHR11946|PTHR11946:SF87|SSF47323|SSF50677|SSF52374|TIGR00392 PGJ_RS01875 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01085|PTHR11749|SSF51366|TIGR01163 PGJ_RS01880 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004477 ComEC/Rec2-related protein PF03772|PTHR30619|PTHR30619:SF2|TIGR00360 PGJ_RS01885 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000623|IPR027417|IPR031322 P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase G3DSA:3.40.50.300|MF_00109|PF01202|PR01100|PTHR21087|PTHR21087:SF0|SSF52540 PGJ_RS01890 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003607|IPR006674|IPR006675|IPR011621|IPR011624 HD domain|HD/PDEase domain|HDIG domain|Metal-dependent phosphohydrolase, 7TM extracellular domain|Metal-dependent phosphohydrolase, 7TM intracellular domain G3DSA:1.10.3210.10|PF01966|PF07697|PF07698|PTHR36442|SM00471|SSF109604|TIGR00277 PGJ_RS01900 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000489|IPR006390|IPR011005 Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding domain GO:0004156|GO:0009396|GO:0042558|GO:0044237 G3DSA:3.20.20.20|PF00809|PTHR20941|PTHR20941:SF1|SSF51717|TIGR01496 PGJ_RS01905 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003390|IPR014046 DNA integrity scanning protein, DisA, N-terminal|Diadenylate cyclase-like G3DSA:3.40.1700.10|PF02457|PIRSF004793|PTHR34185|PTHR34185:SF1|SSF143597|TIGR00159 PGJ_RS01910 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SM00014|SSF48317 PGJ_RS01915 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001452|IPR003646|IPR011990|IPR019734 SH3 domain|SH3-like domain, bacterial-type|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:2.30.30.40|PF08239|PF13432|SM00028|SSF48452|SSF50044 PGJ_RS01920 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025738 Aerotolerance-related protein BatD PF13584 PGJ_RS01925 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13414|PF14559|PTHR23083|SM00028|SSF48452 PGJ_RS01930 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002035|IPR024163 Aerotolerance regulator, N-terminal|von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|PF07584|PTHR22550|PTHR22550:SF8|SM00327|SSF53300 PGJ_RS01935 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002035|IPR024163 Aerotolerance regulator, N-terminal|von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|PF07584|PTHR22550|PTHR22550:SF8|SM00327|SSF53300 PGJ_RS01945 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002035|IPR002881 Domain of unknown function DUF58|von Willebrand factor, type A PF01882|PTHR33608|PTHR33608:SF5|SSF53300 PGJ_RS01950 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011703|IPR016366|IPR027417 ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PTHR11603|PTHR11603:SF148|SSF52540 PGJ_RS01955 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 PF02445|PTHR30573|SSF142754|TIGR00550 PGJ_RS01960 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002638|IPR004393|IPR013785|IPR022412|IPR027277 Aldolase-type TIM barrel|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|PTHR32179|SSF51690|SSF54675|TIGR00078 PGJ_RS01965 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003953|IPR005288|IPR015939|IPR023753|IPR027477|IPR030664 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|L-aspartate oxidase|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain|Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit GO:0005737|GO:0008734|GO:0009435|GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PF02910|PIRSF000171|PR00368|PR00411|PTHR11632|PTHR11632:SF27|SSF46977|SSF51905|SSF56425|TIGR00551 PGJ_RS01975 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS01990 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025209 Domain of unknown function DUF4209 PF13910 PGJ_RS01995 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007421|IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain|Schlafen, AAA domain GO:0005524 PF04326|PF13749|PTHR30595|PTHR30595:SF6 PGJ_RS02005 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025534 Putative PD-(D/E)XK family member (DUF4420) PF14390 PGJ_RS02010 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018310 Putative endonuclease, Z1 domain PF10593 PGJ_RS02015 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003594 Histidine kinase-like ATPase, C-terminal domain G3DSA:3.30.565.10|PF13589|SSF55874 PGJ_RS02020 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029063|IPR031303 DNA methylase, C-5 cytosine-specific, conserved site|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.90.120.10|PF00145|PS00095|SSF53335 PGJ_RS02025 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PTHR24567|SM00100|SM00419|SSF46785|SSF51206 PGJ_RS02030 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF14 PGJ_RS02035 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001279|IPR001763 Metallo-beta-lactamase|Rhodanese-like domain G3DSA:3.40.250.10|G3DSA:3.60.15.10|PF00581|PF00753|PTHR11935|PTHR11935:SF9|SM00450|SM00849|SSF52821|SSF56281 PGJ_RS02040 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 PGJ_RS02050 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039 G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00022_B|PF00749|PR00987|PS00178|PTHR11451|PTHR11451:SF41|SSF48163|SSF52374|TIGR00464 PGJ_RS02055 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal PF04413|PTHR23417|PTHR23417:SF2|SSF53756 PGJ_RS02060 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000917|IPR012160|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Lipoteichoic acid synthase-like|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|PIRSF005091|PTHR10342|PTHR10342:SF236|SSF53649 PGJ_RS02065 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005835|IPR005907|IPR029044 Glucose-1-phosphate thymidylyltransferase, short form|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0008879|GO:0009058|GO:0016779|GO:0045226 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF105|SSF53448|TIGR01207 PGJ_RS02070 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000888|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 G3DSA:2.60.120.10|PD001462|PF00908|PTHR21047|SSF51182|TIGR01221 PGJ_RS02075 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005913|IPR016040|IPR029903 NAD(P)-binding domain|RmlD-like substrate binding domain|dTDP-4-dehydrorhamnose reductase family G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF04321|PTHR10491|PTHR10491:SF4|SSF51735|TIGR01214 PGJ_RS02080 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005888|IPR016040 NAD(P)-binding domain|dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF41|SSF51735|TIGR01181 PGJ_RS02085 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006222|IPR006223|IPR013977|IPR022903|IPR027266|IPR028896|IPR029043 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain|Glycine cleavage system T protein|Glycine cleavage system T protein, bacteria GO:0004047|GO:0005515|GO:0006546 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|MF_00259|PF01571|PF08669|PIRSF006487|PTHR13847|PTHR13847:SF5|SSF101790|SSF103025|TIGR00528 PGJ_RS02090 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018676 Protein of unknown function DUF2149 PF09919 PGJ_RS02095 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618 PGJ_RS02105 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003672 CobN/magnesium chelatase GO:0009058 PF02514|PTHR23304 PGJ_RS02110 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR30069|PTHR30069:SF2|SSF56935 PGJ_RS02115 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025921 HmuY protein PF14064 PGJ_RS02120 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000200|IPR025896|IPR026444 Peptidase C10, streptopain|Secretion system C-terminal sorting domain|Spi protease inhibitor GO:0006508|GO:0008234 PD004169|PF01640|PF13734|PR00797|SSF54001|TIGR04183 PGJ_RS02135 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001189|IPR019831|IPR019832|IPR019833 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:1.10.287.990|PF00081|PF02777|PIRSF000349|PR01703|PS00088|PTHR11404|PTHR11404:SF8|SSF46609|SSF54719 PGJ_RS02140 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005583 Peroxide stress protein YaaA MF_00652|PF03883|PTHR30283|PTHR30283:SF3 PGJ_RS02145 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR31793|SSF54637 PGJ_RS02150 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001539|IPR009000 Peptidase U32|Translation protein, beta-barrel domain GO:0006508|GO:0008233 G3DSA:2.40.30.10|PF01136|PS01276|PTHR30217|PTHR30217:SF6|SSF50447 PGJ_RS02155 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|PTHR20941|SSF55083|TIGR01498 PGJ_RS02160 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 G3DSA:2.40.10.240|G3DSA:3.40.1780.10|MF_00113|PF02547|PTHR30307|PTHR30307:SF0|SSF111337|TIGR00113 PGJ_RS02165 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002501|IPR014780|IPR020103|IPR032819 Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain|tRNA pseudouridine synthase II, TruB|tRNA pseudouridylate synthase B, C-terminal GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 MF_01080|PF01509|PF16198|PTHR13767|PTHR13767:SF9|SSF55120|TIGR00431 PGJ_RS02170 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673|PTHR30622|PTHR30622:SF3|TIGR00753 PGJ_RS02175 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021448 Protein of unknown function DUF3098 PF11297 PGJ_RS02180 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003838|IPR004513 ABC transporter permease protein domain|Cell division protein FtsX GO:0007049|GO:0016020|GO:0016021 PF02687|PIRSF003097 PGJ_RS02190 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001228|IPR029044 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0008299|GO:0050518 G3DSA:3.90.550.10|MF_00108|PF01128|PTHR32125|PTHR32125:SF4|SSF53448 PGJ_RS02195 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 G3DSA:1.10.287.1040|PD028235|PF02609|SSF116842|TIGR01280 PGJ_RS02200 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003594|IPR003661|IPR004358|IPR011990|IPR019734 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.25.40.10|G3DSA:3.30.565.10|PF02518|PF13424|PR00344|PTHR24423|SM00028|SM00387|SSF47384|SSF48452|SSF55874 PGJ_RS02205 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 PGJ_RS02210 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13424|SM00028|SSF48452 PGJ_RS02215 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|PTHR21058|SSF52121|TIGR00114 PGJ_RS02220 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000200|IPR025896|IPR026444 Peptidase C10, streptopain|Secretion system C-terminal sorting domain|Spi protease inhibitor GO:0006508|GO:0008234 PD004169|PF01640|PF13734|PR00797|SSF54001|TIGR04183 PGJ_RS02230 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 G3DSA:3.75.10.10|PF04371|PTHR31377|PTHR31377:SF0|SSF55909 PGJ_RS02235 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000667|IPR012338 Beta-lactamase/transpeptidase-like|Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 G3DSA:3.40.710.10|PF02113|PR00922|PTHR30023|PTHR30023:SF0|SSF56601|TIGR00666 PGJ_RS02240 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS02245 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS02250 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001270|IPR003593|IPR008921|IPR012763|IPR022754|IPR027417 AAA+ ATPase domain|ClpA/B family|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF12169|PF13177|PR00300|PTHR11669|PTHR11669:SF0|SM00382|SSF48019|SSF52540|TIGR02397 PGJ_RS02255 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004646|IPR004647|IPR011167|IPR020557 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain|Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain|Fumarate lyase, conserved site|Iron-dependent fumarate hydratase GO:0003824|GO:0004333|GO:0006091|GO:0016829|GO:0016836 G3DSA:3.20.130.10|PF05681|PF05683|PIRSF001394|PS00163|PTHR30389|PTHR30389:SF6|SSF117457|TIGR00722|TIGR00723 PGJ_RS02265 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|PTHR32332|PTHR32332:SF20|SSF51412 PGJ_RS02270 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR008969|IPR010917|IPR012910|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF07715|PF13715|PS01156|PTHR30069|SSF49464|SSF56935 PGJ_RS02285 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006037|IPR006512 Regulator of K+ conductance, C-terminal|YidE/YbjL duplication GO:0006813|GO:0008324 G3DSA:3.30.70.1450|PF02080|PF06826|PTHR30445|PTHR30445:SF1|SSF116726|TIGR01625 PGJ_RS02295 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002524|IPR027469 Cation efflux protein|Cation efflux protein transmembrane domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|PF01545|PTHR11562|PTHR11562:SF17|SSF160240|SSF161111|TIGR01297 PGJ_RS02300 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012349|IPR024747 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-related GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF12900|PTHR34071|SSF50475 PGJ_RS02305 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic PTHR30189 PGJ_RS02310 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002610|IPR022764 Peptidase S54, rhomboid|Peptidase S54, rhomboid domain GO:0004252|GO:0006508|GO:0016021 G3DSA:1.20.1540.10|PF01694|PTHR22936|SSF144091 PGJ_RS02315 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002610|IPR022764 Peptidase S54, rhomboid|Peptidase S54, rhomboid domain GO:0004252|GO:0006508|GO:0016021 G3DSA:1.20.1540.10|PF01694|PTHR22936|SSF144091 PGJ_RS02320 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|PF03372|SSF56219 PGJ_RS02325 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001597|IPR011166|IPR015421|IPR015422|IPR015424 Aromatic amino acid beta-eliminating lyase/threonine aldolase|Beta-eliminating lyase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0009072|GO:0016829|GO:0016830 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PIRSF001386|PTHR32325|SSF53383 PGJ_RS02330 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609 PGJ_RS02335 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002695|IPR011607|IPR016193|IPR024051 AICAR transformylase domain|AICARFT/IMPCHase bienzyme|Cytidine deaminase-like|Methylglyoxal synthase-like domain GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.140.20|G3DSA:3.40.50.1380|MF_00139|PF01808|PF02142|PIRSF000414|PTHR11692|PTHR11692:SF2|SM00798|SM00851|SSF52335|SSF53927 PGJ_RS02340 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF06723|PR01652|PTHR19375|PTHR19375:SF117|SSF53067|TIGR00904 PGJ_RS02345 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007221 Rod shape-determining protein MreC GO:0008360 PF04085|PTHR34138|PTHR34138:SF1 PGJ_RS02350 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TIGR03426 PGJ_RS02355 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001460|IPR005311|IPR012338|IPR017790 Beta-lactamase/transpeptidase-like|Penicillin-binding protein 2|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658|GO:0016020 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PTHR30627|PTHR30627:SF2|SSF56519|SSF56601|TIGR03423 PGJ_RS02360 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001182|IPR011923|IPR018365 Cell cycle protein FtsW/RodA|Cell cycle, FtsW / RodA / SpoVE, conserved site|Rod shape-determining protein RodA GO:0007049|GO:0008360|GO:0016021|GO:0051301 PF01098|PS00428|PTHR30474|PTHR30474:SF1 PGJ_RS02370 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000119|IPR005902|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|PF00216|SSF47729|TIGR01201 PGJ_RS02375 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021670 Protein of unknown function DUF3256 PF11644|SSF160925 PGJ_RS02385 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002205|IPR005743|IPR006691|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|PTHR10169|PTHR10169:SF48|SM00434|SSF101904|SSF56719|TIGR01063 PGJ_RS02390 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PTHR23083|SM00028|SSF48452 PGJ_RS02395 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025668 Transposase DDE domain PF13612 PGJ_RS02400 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PTHR30086|PTHR30086:SF6 PGJ_RS02405 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010870|IPR023614 Phosphate-selective porin O/P|Porin domain G3DSA:2.40.160.10|PF07396|SSF56935 PGJ_RS02410 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|SSF161098 PGJ_RS02415 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 PGJ_RS02420 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|SSF53850 PGJ_RS02425 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000445|IPR003265|IPR004036|IPR005760|IPR011257|IPR015797|IPR023170|IPR029119 A/G-specific adenine glycosylase MutY|DNA glycosylase|Endonuclease III-like, conserved site-2|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain|MutY, C-terminal|NUDIX hydrolase domain-like GO:0003677|GO:0003824|GO:0006281|GO:0006284|GO:0016787|GO:0019104 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|G3DSA:3.90.79.10|PF00633|PF00730|PF14815|PS01155|PTHR10359|PTHR10359:SF1|SM00478|SSF48150|SSF55811|TIGR01084 PGJ_RS02430 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026444|IPR032675 Leucine-rich repeat domain, L domain-like|Secretion system C-terminal sorting domain G3DSA:3.80.10.10|SSF52058|TIGR04183 PGJ_RS02435 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011659|IPR011990 Tetratricopeptide-like helical domain|WD40-like Beta Propeller GO:0005515 G3DSA:1.25.40.10|PF07676|PF13432|SSF48452 PGJ_RS02440 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000845|IPR018017 Nucleoside phosphorylase|Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PF01048|PTHR21234|PTHR21234:SF8|SSF53167 PGJ_RS02445 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002313|IPR004364|IPR004365|IPR012340|IPR018149|IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PR00982|PTHR22594|PTHR22594:SF4|SSF50249|SSF55681|TIGR00499 PGJ_RS02450 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF01210|PF07479|PIRSF000114|PR00077|PS00957|PTHR11728|PTHR11728:SF1|SSF48179|SSF51735 PGJ_RS02455 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001672|IPR018189 Phosphoglucose isomerase (PGI)|Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 G3DSA:3.40.50.10490|MF_00473|PF00342|PR00662|PS00174|PS00765|PTHR11469|SSF53697 PGJ_RS02460 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025632 Protein of unknown function DUF4290 PF14123 PGJ_RS02465 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001986|IPR005750|IPR013792 Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|MF_00111|PF00275|PTHR21090|PTHR21090:SF4|SSF55205|TIGR01072 PGJ_RS02470 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002676|IPR009000|IPR011033|IPR011961|IPR027275 16S rRNA processing protein RimM|PRC-barrel domain|PRC-barrel-like|RimM protein|Translation protein, beta-barrel domain GO:0005840|GO:0006364|GO:0043022 G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|PF05239|PTHR33692|SSF50346|SSF50447|TIGR02273 PGJ_RS02475 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003821|IPR013512|IPR013644|IPR016040|IPR026877 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|NAD(P)-binding domain GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|PTHR30525|SSF51735|SSF55347|SSF69055|TIGR00243 PGJ_RS02480 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000241|IPR002052|IPR004114|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Putative RNA methylase domain|S-adenosyl-L-methionine-dependent methyltransferase|THUMP domain GO:0003676|GO:0003723|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF01170|PF02926|PS00092|PS01261|PTHR14911|PTHR14911:SF13|SM00981|SSF53335 PGJ_RS02485 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001375|IPR002469|IPR029058 Alpha/Beta hydrolase fold|Dipeptidylpeptidase IV, N-terminal domain|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 G3DSA:2.140.10.30|G3DSA:3.40.50.1820|PF00326|PF00930|PTHR11731|PTHR11731:SF110|SSF53474|SSF82171 PGJ_RS02490 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000115|IPR011054|IPR013815|IPR013816|IPR016185|IPR020560|IPR020561|IPR020562 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, N-terminal|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|PTHR10520|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 PGJ_RS02500 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR032806 H repeat-associated protein, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF13808|PTHR30298 PGJ_RS02505 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|SSF55729 PGJ_RS02525 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PF01553|PTHR10434|PTHR10434:SF9|SM00563|SSF69593 PGJ_RS02530 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PTHR23088|PTHR23088:SF28|SSF56317 PGJ_RS02535 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000836|IPR004467|IPR023031|IPR029057 Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004588|GO:0006221|GO:0009116 G3DSA:3.40.50.2020|MF_01208|PF00156|PTHR19278|SSF53271|TIGR00336 PGJ_RS02540 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic SSF55961 PGJ_RS02550 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001206|IPR005218|IPR016064|IPR017438 Diacylglycerol kinase, catalytic domain|Diacylglycerol/lipid kinase|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0008152|GO:0016301 G3DSA:3.40.50.10330|PF00781|PTHR12358|SM00046|SSF111331|TIGR00147 PGJ_RS02555 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016856|IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF|NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0033739|GO:0046857|GO:0055114 G3DSA:3.30.1130.10|MF_00818|PF14489|PIRSF027377|PTHR34354|PTHR34354:SF1|SSF55620|TIGR03139 PGJ_RS02560 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 PGJ_RS02565 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|PTHR12526|SSF53756 PGJ_RS02570 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000544|IPR001279|IPR004143|IPR020605 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Metallo-beta-lactamase|Octanoyltransferase|Octanoyltransferase, conserved site GO:0005737|GO:0006464|GO:0009107|GO:0016415 G3DSA:3.60.15.10|G3DSA:3.90.1550.10|MF_00013|PD006086|PF03099|PF12706|PS01313|PTHR10993|SM00849|SSF55681|SSF56281|TIGR00214 PGJ_RS02575 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003170|IPR006094|IPR011601|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|PTHR21071|PTHR21071:SF6|SSF56176|SSF56194|TIGR00179 PGJ_RS02580 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 PGJ_RS02585 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PF02652|PTHR30003|PTHR30003:SF3|TIGR00795 PGJ_RS02590 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001126|IPR017961|IPR025188 DNA polymerase, Y-family, little finger domain|Domain of unknown function DUF4113|UmuC domain GO:0003684|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|PF00817|PF11799|PF13438|PTHR11076|PTHR11076:SF40|SSF100879|SSF56672 PGJ_RS02595 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006197|IPR015927|IPR019759|IPR028360 Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C GO:0003677|GO:0006355 G3DSA:2.10.109.10|PF00717|PR00726|PTHR33516|PTHR33516:SF1|SSF51306 PGJ_RS02600 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002810|IPR012340 NfeD-like, C-terminal domain|Nucleic acid-binding, OB-fold G3DSA:2.40.50.140|PF01957|SSF141322 PGJ_RS02605 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001107|IPR001972|IPR018080 Band 7 domain|Band 7/stomatin-like, conserved site|Stomatin family GO:0016020 PF01145|PS01270|PTHR10264|PTHR10264:SF27|SM00244|SSF117892 PGJ_RS02615 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012136|IPR029035 DHS-like NAD/FAD-binding domain|NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 G3DSA:3.40.50.1220|PF02233|PTHR10160|PTHR10160:SF24|SSF52467 PGJ_RS02620 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal PF12769|PTHR10160 PGJ_RS02625 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007698|IPR007886|IPR016040 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|NAD(P)-binding domain G3DSA:3.40.50.1770|PF01262|PF05222|PTHR10160|SM01002|SM01003|SSF51735|SSF52283 PGJ_RS02630 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001185|IPR019823 Large-conductance mechanosensitive channel|Large-conductance mechanosensitive channel, conserved site GO:0005216|GO:0006810|GO:0016021 MF_00115|PF01741|PR01264|PS01327|PTHR30266|PTHR30266:SF2|SSF81330|TIGR00220 PGJ_RS02635 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003781|IPR016040|IPR016102|IPR032875 CoA-binding|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF13380|PF13549|PF13607|PTHR33303|PTHR33303:SF3|SM00881|SSF51735|SSF52210|SSF56059 PGJ_RS02640 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF385|SSF53383 PGJ_RS02645 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011628 Cleaved adhesin PF07675 PGJ_RS02650 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025563 Protein of unknown function DUF4286 PF14114 PGJ_RS02655 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002176|IPR012337|IPR020563 Crossover junction endodeoxyribonuclease RuvC|Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site|Ribonuclease H-like domain GO:0003676|GO:0004520|GO:0006281|GO:0006310|GO:0008821 G3DSA:3.30.420.10|MF_00034|PF02075|PR00696|PS01321|PTHR30194|SSF53098|TIGR00228 PGJ_RS02660 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002716|IPR003714|IPR027417|IPR029060 P-loop containing nucleoside triphosphate hydrolase|PIN domain|PIN domain-like|PhoH-like protein GO:0005524 G3DSA:3.40.50.1010|G3DSA:3.40.50.300|PF02562|PF13638|PTHR30473|PTHR30473:SF2|SM00670|SSF52540 PGJ_RS02665 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000559|IPR020628|IPR027417 Formate-tetrahydrofolate ligase, FTHFS|Formate-tetrahydrofolate ligase, FTHFS, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0004329|GO:0005524|GO:0009396 G3DSA:3.10.410.10|G3DSA:3.30.1510.10|G3DSA:3.40.50.300|MF_01543|PF01268|PS00721|PS00722|PTHR10025|SSF52540 PGJ_RS02670 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS02675 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|PTHR30173|PTHR30173:SF24|SSF88659|SSF88946|TIGR02937 PGJ_RS02685 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic G3DSA:3.30.930.10 PGJ_RS02690 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001179|IPR023566 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type GO:0006457 G3DSA:3.10.50.40|PF00254|PTHR10516|PTHR10516:SF316|SSF54534 PGJ_RS02695 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000453|IPR020541 Chorismate synthase|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|PS00789|PTHR21085|SSF103263|TIGR00033 PGJ_RS02700 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR032806 H repeat-associated protein, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF13808|PTHR30298 PGJ_RS02710 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 PF03577|PTHR12994|PTHR12994:SF17 PGJ_RS02715 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR019079|IPR029052 Capsule synthesis protein, CapA|Metallo-dependent phosphatase-like G3DSA:3.60.21.30|PF09587|PTHR33393|PTHR33393:SF2|SM00854|SSF56300 PGJ_RS02720 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000979|IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like|Phosphodiesterase MJ0936/Vps29 G3DSA:3.60.21.10|PF12850|PTHR11124|SSF56300|TIGR00040 PGJ_RS02725 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR014729|IPR018317 Queuosine biosynthesis protein QueC|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|MF_01633|PF06508|PIRSF006293|PTHR11587|PTHR11587:SF3|SSF52402|TIGR00364 PGJ_RS02730 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021729|IPR025303 Domain of unknown function DUF3298|Domain of unknown function DUF4163 G3DSA:3.30.565.40|G3DSA:3.90.640.20|PF11738|PF13739 PGJ_RS02735 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|PIRSF003078|PTHR31760|PTHR31760:SF0|SSF53335|TIGR00138 PGJ_RS02740 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|SM00849|SSF56281 PGJ_RS02745 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003437|IPR015421|IPR015424|IPR020580|IPR020581 Glycine cleavage system P protein|Glycine cleavage system P-protein, N-terminal|Glycine dehydrogenase (decarboxylating)|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0004375|GO:0006544|GO:0006546|GO:0055114 G3DSA:3.40.640.10|PF02347|PTHR11773|PTHR11773:SF1|SSF53383|TIGR00461 PGJ_RS02750 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021428 Protein of unknown function DUF3078 PF11276 PGJ_RS02755 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003840|IPR027417|IPR027785 DNA helicase|P-loop containing nucleoside triphosphate hydrolase|UvrD-like helicase C-terminal domain GO:0004386|GO:0005524 G3DSA:3.40.50.300|PF13538|PF13604|PTHR23274|PTHR23274:SF1|SSF52540 PGJ_RS02765 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR024213 Protein of unknown function DUF3822 PF12864 PGJ_RS02770 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002052|IPR004398|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0031167|GO:0032259 G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|PTHR18895|PTHR18895:SF60|SSF53335 PGJ_RS02775 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PR00681|PTHR10724|PTHR10724:SF6|SM00316|SSF50249 PGJ_RS02780 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR027783 Bacterial Pleckstrin homology domain-related PF10882 PGJ_RS02785 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic PF12669 PGJ_RS02790 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003373|IPR005225|IPR006073|IPR007167|IPR008988|IPR011619|IPR011640|IPR011642|IPR027417 Ferrous iron transport protein B|Ferrous iron transport protein B, C-terminal|Ferrous iron transport protein B, N-terminal|Ferrous iron transporter FeoA domain|GTP binding domain|Nucleoside transporter/FeoB GTPase, Gate domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcriptional repressor, C-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021|GO:0046914 G3DSA:3.40.50.300|PF02421|PF04023|PF07664|PF07670|PR00326|PTHR11649|PTHR11649:SF37|SM00899|SSF50037|SSF52540|TIGR00231|TIGR00437 PGJ_RS02800 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001736|IPR025202 Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824 G3DSA:3.30.870.10|PF13091|PTHR21248|PTHR21248:SF3|SM00155|SSF56024 PGJ_RS02805 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001544|IPR005786 Aminotransferase class IV|Branched-chain amino acid aminotransferase II GO:0003824|GO:0004084|GO:0008152|GO:0009081 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PIRSF006468|PTHR11825|PTHR11825:SF2|SSF56752|TIGR01123 PGJ_RS02810 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001509|IPR016040|IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0009226|GO:0016491|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00956|PF01370|PTHR10366|PTHR10366:SF259|SSF51735 PGJ_RS02815 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006368|IPR016040 GDP-mannose 4,6-dehydratase|NAD(P)-binding domain GO:0008446|GO:0019673 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00955|PF16363|PTHR10366|PTHR10366:SF32|SSF51735|TIGR01472 PGJ_RS02820 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001519|IPR008331|IPR009078|IPR012347 Ferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PTHR11431|PTHR11431:SF4|SSF47240 PGJ_RS02825 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003737|IPR004547|IPR006148|IPR024078 Glucosamine-6-phosphate isomerase|Glucosamine/galactosamine-6-phosphate isomerase|N-acetylglucosaminyl phosphatidylinositol deacetylase-related|Putative deacetylase LmbE-like domain GO:0004342|GO:0005975|GO:0006044 G3DSA:3.40.50.10320|G3DSA:3.40.50.1360|PF01182|PF02585|PTHR11280|PTHR11280:SF7|SSF100950|SSF102588 PGJ_RS02830 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009003|IPR019500 Peptidase S1, PA clan|Peptidase S46 GO:0008239|GO:0070009 G3DSA:2.40.10.10|PF10459|PTHR38469|PTHR38469:SF1|SSF50494 PGJ_RS02835 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012042|IPR023577|IPR033469 CYTH domain|CYTH-like domain|Inorganic triphosphatase NeuTTM/CthTTM-like G3DSA:2.40.320.10|PF01928|PIRSF016487|PTHR40114|SM01118|SSF55154 PGJ_RS02840 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002625|IPR018598 Domain of unknown function DUF2027|Smr domain G3DSA:2.60.40.1600|PF01713|PF09640|SSF158949 PGJ_RS02845 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003115|IPR008323 ParB/Sulfiredoxin|Uncharacterised conserved protein UCP033563 PF06245|PIRSF033563|PTHR36454|PTHR36454:SF1|SSF110849 PGJ_RS02850 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006139|IPR006140|IPR016040|IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PTHR10996|PTHR10996:SF20|SSF51735|SSF52283 PGJ_RS02855 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR022278 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Phosphoserine aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004648|GO:0006564 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00160|PF00266|PIRSF000525|PS00595|PTHR21152|PTHR21152:SF1|SSF53383|TIGR01364 PGJ_RS02860 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028359 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0016616|GO:0016628|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|PTHR11374|PTHR11374:SF25|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 PGJ_RS02865 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005902|IPR010992 Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|SSF47729|TIGR01201 PGJ_RS02870 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|PTHR30053|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 PGJ_RS02875 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005814|IPR010164|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Ornithine aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|PTHR11986|PTHR11986:SF18|SSF53383|TIGR01885 PGJ_RS02880 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR014541|IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase|Predicted amidinotransferase, FN0238 type G3DSA:3.75.10.10|PF02274|PIRSF028188|PTHR12737|PTHR12737:SF21|SSF55909 PGJ_RS02885 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005931|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Delta-1-pyrroline-5-carboxylate dehydrogenase GO:0003842|GO:0006537|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PTHR11699|PTHR11699:SF18|SSF53720|TIGR01236 PGJ_RS02920 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025668 Transposase DDE domain PF13612 PGJ_RS02925 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR012337|IPR014736|IPR025399 Domain of unknown function DUF4372|Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609|PF14294|PTHR33258|PTHR33258:SF1|SSF53098 PGJ_RS02935 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005144|IPR012833 ATP-cone domain|Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 G3DSA:3.20.70.20|PF03477|PF13597|PTHR21075|SSF51998|TIGR02487 PGJ_RS02940 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007197|IPR012837|IPR013785 Aldolase-type TIM barrel|Radical SAM|Ribonucleoside-triphosphate reductase activating, anaerobic GO:0003824|GO:0005737|GO:0043365|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.20.20.70|PF04055|PF13353|PIRSF000368|PTHR30352|PTHR30352:SF2|SSF102114|TIGR02491 PGJ_RS02945 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PTHR33175|SM00411|SSF47729 PGJ_RS02950 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003029|IPR004659|IPR012340|IPR019307|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E/G|S1 domain GO:0003676|GO:0003723|GO:0004540|GO:0006396 G3DSA:2.40.50.140|PF00575|PF10150|PTHR30001|SM00316|SSF50249|TIGR00757 PGJ_RS02955 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000093|IPR006171|IPR015967|IPR023627|IPR023628 DNA recombination protein RecR|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|Recombination protein RecR, conserved site|Toprim domain GO:0003677|GO:0006281|GO:0006310 MF_00017|PF02132|PF13662|PS01300|PTHR30446|PTHR30446:SF0|SM00493|SSF111304|TIGR00615 PGJ_RS02960 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|SSF55729 PGJ_RS02965 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001357|IPR001679|IPR003583|IPR004149|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR018239|IPR033136 BRCT domain|Helix-hairpin-helix DNA-binding motif, class 1|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, active site|NAD-dependent DNA ligase, adenylation|NAD-dependent DNA ligase, conserved site|Nucleic acid-binding, OB-fold|RuvA domain 2-like|Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003677|GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:2.40.50.140|G3DSA:3.30.470.30|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03119|PF03120|PF12826|PF14520|PIRSF001604|PS01055|PS01056|PTHR23389|PTHR23389:SF9|SM00278|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091|TIGR00575 PGJ_RS02970 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30489 PGJ_RS02980 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|PTHR10434|SM00563|SSF69593 PGJ_RS02985 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR014825|IPR016024 Armadillo-type fold|DNA alkylation repair enzyme GO:0005488 G3DSA:1.25.40.290|PF08713|PTHR34070|PTHR34070:SF1|SSF48371 PGJ_RS02995 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016037|IPR030960|IPR030963 3-dehydroquinate synthase AroB|3-dehydroquinate synthase domain|3-dehydroquinate synthase family GO:0003856|GO:0005737|GO:0009073|GO:0016838 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF01761|PIRSF001455|PTHR21090|SSF56796|TIGR01357 PGJ_RS03000 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation protein, beta-barrel domain GO:0000166|GO:0003676|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0016876|GO:0043039 G3DSA:3.30.930.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|PTHR11777|PTHR11777:SF9|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 PGJ_RS03015 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007692|IPR007693|IPR007694|IPR016136|IPR027417 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|PTHR30153|SSF48024|SSF52540|TIGR00665 PGJ_RS03020 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR009000|IPR009022|IPR013842|IPR027417 Elongation factor 4|Elongation factor G, III-V domain|GTP-binding protein LepA, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|PTHR23115|PTHR23115:SF175|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01393 PGJ_RS03030 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PTHR30328|PTHR30328:SF8|SSF46689 PGJ_RS03035 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002347|IPR011284|IPR016040|IPR020904 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0004316|GO:0006633|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF328|SM00822|SSF51735|TIGR01830 PGJ_RS03040 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006145|IPR006224|IPR020103 Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PF00849|PS01129|PTHR11079|PTHR11079:SF83|SSF55120 PGJ_RS03045 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF458|SM00421|SSF46894 PGJ_RS03050 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012312 Haemerythrin-like G3DSA:1.20.120.520|PF01814 PGJ_RS03055 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF12|SSF51735 PGJ_RS03060 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006095|IPR006096|IPR006097|IPR014362|IPR016040 Glutamate dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal|Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain|NAD(P)-binding domain GO:0006520|GO:0016491|GO:0016639|GO:0055114 G3DSA:1.10.285.10|G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF00208|PF02812|PIRSF000185|PR00082|PS00074|PTHR11606|PTHR11606:SF4|SM00839|SSF51735|SSF53223 PGJ_RS03065 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR032806 H repeat-associated protein, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF13808|PTHR30298 PGJ_RS03070 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic SSF55486 PGJ_RS03080 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS03085 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002130|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PTHR11071|PTHR11071:SF78|SSF50891 PGJ_RS03090 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524|IPR032781 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PF16326|PS00211|PTHR19211|SM00382|SSF52540 PGJ_RS03095 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001638|IPR008258|IPR023346 Lysozyme-like domain|Solute-binding protein family 3/N-terminal domain of MltF|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|G3DSA:3.40.190.10|PF00497|PF01464|PTHR21666|SM00062|SSF53850|SSF53955 PGJ_RS03105 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|PTHR24322|PTHR24322:SF485|SSF51735 PGJ_RS03110 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006139|IPR006140|IPR016040|IPR020921|IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|Erythronate-4-phosphate dehydrogenase|NAD(P)-binding domain GO:0005737|GO:0008152|GO:0008615|GO:0016616|GO:0033711|GO:0051287|GO:0055114 G3DSA:3.40.50.720|MF_01825|PF00389|PF02826|PS00065|PTHR10996|PTHR10996:SF111|SSF51735|SSF52283 PGJ_RS03115 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021857 Protein of unknown function DUF3467 PF11950 PGJ_RS03120 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025635 Protein of unknown function DUF4293 PF14126 PGJ_RS03125 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006110|IPR012293 RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 G3DSA:3.90.940.10|PF01192|SM01409 PGJ_RS03130 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR017689 Outer membrane protein assembly factor BamD PF13525|TIGR03302 PGJ_RS03140 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002156|IPR009027|IPR011320|IPR012337|IPR017290 Ribonuclease H domain|Ribonuclease H, bacteria|Ribonuclease H-like domain|Ribonuclease H1, N-terminal|Ribosomal protein L9/RNase H1, N-terminal GO:0003676|GO:0004523 G3DSA:3.30.420.10|G3DSA:3.40.970.10|PF00075|PF01693|PIRSF037839|PTHR10642|SSF53098|SSF55658 PGJ_RS03145 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF14559|PTHR23083|SM00028|SSF48452 PGJ_RS03150 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|PTHR13061|SSF51161 PGJ_RS03155 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000587|IPR000994|IPR028980|IPR029149|IPR032416 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, C-terminal domain|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|PF16188|PF16189|PTHR10804|PTHR10804:SF87|SSF53092|SSF55920 PGJ_RS03160 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025393|IPR029044 Domain of unknown function DUF4301|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF14134|SSF53448 PGJ_RS03165 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 PGJ_RS03175 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 PGJ_RS03180 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|PF13155|SSF56731|SSF57783 PGJ_RS03185 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|PTHR34585|SSF46955 PGJ_RS03190 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|PTHR34585|SSF46955 PGJ_RS03195 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|PTHR30482:SF10 PGJ_RS03200 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF371 PGJ_RS03210 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000092|IPR008949 Isoprenoid synthase domain|Polyprenyl synthetase GO:0008299 G3DSA:1.10.600.10|PF00348|SSF48576 PGJ_RS03215 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PTHR30483|PTHR30483:SF6|SSF53822 PGJ_RS03220 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 PGJ_RS03225 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF525|SM00382|SSF52540 PGJ_RS03230 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR011010|IPR013762|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PF13102|PTHR30349|PTHR30349:SF20|SSF56349 PGJ_RS03235 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR011010|IPR013762|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PF13102|PTHR30349|PTHR30349:SF26|SSF56349 PGJ_RS03240 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic PTHR35810 PGJ_RS03250 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001466|IPR001586|IPR012338 Beta-lactamase, class-C active site|Beta-lactamase-related|Beta-lactamase/transpeptidase-like GO:0008800|GO:0017001|GO:0030288 G3DSA:3.40.710.10|PF00144|PS00336|PTHR22935|PTHR22935:SF64|SSF56601 PGJ_RS03255 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 PF06580|PTHR34220|PTHR34220:SF1 PGJ_RS03260 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003594|IPR010559 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 G3DSA:3.30.565.10|PF06580|PTHR34220|PTHR34220:SF1|SSF55874 PGJ_RS03265 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001789|IPR007492|IPR011006 CheY-like superfamily|LytTR DNA-binding domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677 G3DSA:2.40.50.40|G3DSA:3.40.50.2300|PF00072|PF04397|PTHR26402|SM00448|SM00850|SSF52172 PGJ_RS03275 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018534 Tetracycline regulation of excision, RteC PF09357 PGJ_RS03285 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 PGJ_RS03295 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025683 Protein beta PF14350 PGJ_RS03300 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010359 HTH domain, IrrE-type PF06114 PGJ_RS03310 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011010|IPR013762|IPR023109|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF13102|PTHR30349|PTHR30349:SF26|SSF56349 PGJ_RS03315 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR011010|IPR013762|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PF13102|PTHR30349|PTHR30349:SF26|SSF56349 PGJ_RS03320 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|PTHR19375|PTHR19375:SF173|SSF100920|SSF53067|TIGR02350 PGJ_RS03330 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR011010|IPR013762|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PF13102|PTHR30349|PTHR30349:SF22|SSF56349 PGJ_RS03340 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic PF12728 PGJ_RS03345 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007936 Virulence-associated E PF05272|PTHR34985 PGJ_RS03350 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|PF01807|PF13155|SSF57783 PGJ_RS03355 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008687 Bacterial mobilisation PF05713 PGJ_RS03360 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 PGJ_RS03370 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 PGJ_RS03375 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003497|IPR003812 BRO N-terminal domain|Fido domain G3DSA:1.10.3290.10|PF02498|PF02661|PTHR39560|PTHR39560:SF1|SM01040|SSF140931 PGJ_RS03380 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase PF13289|SSF52540 PGJ_RS03395 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001917|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008152|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00599|PTHR13693|PTHR13693:SF59|SSF53383 PGJ_RS03400 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006139|IPR006140|IPR016040|IPR029752|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00670|PS00671|PTHR10996|SSF51735|SSF52283 PGJ_RS03405 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007139 Protein of unknown function DUF349 PF03993 PGJ_RS03410 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032806 H repeat-associated protein, N-terminal PF13808 PGJ_RS03415 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025668 Transposase DDE domain PF13612 PGJ_RS03420 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|SSF52266 PGJ_RS03425 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001087|IPR013830 GDSL lipase/esterase|SGNH hydrolase-type esterase domain GO:0016788 G3DSA:3.40.50.1110|PF00657|SSF52266 PGJ_RS03430 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004299|IPR024194|IPR028362 Alginate O-acetyltransferase AlgI|Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB|Membrane bound O-acyl transferase, MBOAT GO:0042121 PF03062|PIRSF016636|PIRSF500217|PTHR13285|PTHR13285:SF24 PGJ_RS03435 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|PTHR30055:SF27|SSF46689 PGJ_RS03440 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004869 Membrane transport protein, MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|PTHR33406|SSF82866 PGJ_RS03445 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR033399 Putative outer membrane lipoprotein-sorting protein G3DSA:2.50.20.10|PF17131 PGJ_RS03450 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic SSF56935 PGJ_RS03455 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24222|PTHR24222:SF24|SM00382|SSF52540|SSF90123 PGJ_RS03460 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24222|PTHR24222:SF29|SM00382|SSF52540|SSF90123 PGJ_RS03465 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 PGJ_RS03480 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF13180|PTHR32060|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 PGJ_RS03485 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008490 Transposase InsH, N-terminal PF05598|PTHR33803|PTHR33803:SF1 PGJ_RS03490 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR032806 H repeat-associated protein, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF13808|PTHR30298 PGJ_RS03495 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 PGJ_RS03500 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000951|IPR001433|IPR012165|IPR017938|IPR019480 Cytochrome-c3 hydrogenase, gamma subunit|Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain|Oxidoreductase FAD/NAD(P)-binding|Phthalate dioxygenase reductase|Riboflavin synthase-like beta-barrel GO:0006221|GO:0016491|GO:0050660|GO:0051537|GO:0055114 G3DSA:2.10.240.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF10418|PIRSF006816|PR00409|PTHR19370|PTHR19370:SF68|SSF52343|SSF63380 PGJ_RS03505 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001295|IPR005720|IPR012135|IPR013785|IPR024920 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1|Dihydroorotate dehydrogenase, class 1/ 2|Dihydroorotate dehydrogenase, conserved site GO:0003824|GO:0004152|GO:0005737|GO:0006207|GO:0006221|GO:0006222|GO:0016627|GO:0055114 G3DSA:3.20.20.70|MF_00224|PF01180|PIRSF000164|PS00911|PS00912|PTHR11938|PTHR11938:SF5|SSF51395|TIGR01037 PGJ_RS03510 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004163|IPR004165|IPR012792 3-oxoacid CoA-transferase, subunit A|Coenzyme A transferase binding site|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.1080.10|PF01144|PS01273|PTHR13707|SM00882|SSF100950|TIGR02429 PGJ_RS03515 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 PGJ_RS03520 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008567|IPR013785 3-keto-5-aminohexanoate cleavage enzyme|Aldolase-type TIM barrel GO:0003824|GO:0016740|GO:0019475 G3DSA:3.20.20.70|PF05853|PTHR37418|PTHR37418:SF2 PGJ_RS03525 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011032|IPR013149|IPR016040 Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|SSF50129|SSF51735 PGJ_RS03530 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003739|IPR007197|IPR013785|IPR022459|IPR025895 Aldolase-type TIM barrel|Lysine-2,3-aminomutase|Lysine-2,3-aminomutase, C-terminal domain|Lysine-2,3-aminomutase/glutamate 2,3-aminomutase|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF12544|PF13353|PIRSF004911|PTHR30538|PTHR30538:SF1|SSF102114|TIGR00238|TIGR03820 PGJ_RS03540 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000432|IPR005747|IPR027417 DNA mismatch repair protein MutS, C-terminal|Endonuclease MutS2|P-loop containing nucleoside triphosphate hydrolase GO:0004519|GO:0005524|GO:0006298|GO:0016887|GO:0030983|GO:0045910 G3DSA:3.40.50.300|PF00488|PTHR11361|PTHR11361:SF14|SM00534|SSF52540 PGJ_RS03545 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR015130|IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic|D-Lysine 5,6-aminomutase alpha subunit GO:0003824|GO:0008152|GO:0031419 G3DSA:3.20.20.440|PF09043|SSF51703 PGJ_RS03550 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006158|IPR028991 Cobalamin (vitamin B12)-binding domain|D-lysine 5,6-aminomutase beta subunit KamE, N-terminal GO:0031419|GO:0046872|GO:0046983 G3DSA:3.30.30.60|G3DSA:3.40.50.280|PF02310|PF16554|SSF117778|SSF52242 PGJ_RS03555 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004165|IPR012791 3-oxoacid CoA-transferase, subunit B|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.810.20|PF01144|PTHR13707|SM00882|SSF100950|TIGR02428 PGJ_RS03560 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PIRSF016578|PS00072|PS00073|PTHR10909|PTHR10909:SF305|SSF47203|SSF56645 PGJ_RS03565 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000049|IPR012255|IPR014729|IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Electron transfer flavoprotein, beta-subunit, conserved site|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055 G3DSA:3.40.50.620|PF01012|PIRSF000090|PS01065|PTHR21294|PTHR21294:SF0|SM00893|SSF52402 PGJ_RS03570 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001308|IPR014729|IPR014730|IPR014731|IPR018206|IPR029035 DHS-like NAD/FAD-binding domain|Electron transfer flavoprotein alpha subunit/FixB|Electron transfer flavoprotein subunit alpha, conserved site|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|PIRSF000089|PS00696|PTHR10909|PTHR10909:SF294|SM00893|SSF52402|SSF52467 PGJ_RS03575 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|PTHR11941:SF54|SSF52096 PGJ_RS03580 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006108|IPR006176|IPR006180|IPR008927|IPR013328|IPR016040|IPR022694 3-hydroxyacyl-CoA dehydrogenase|3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114|GO:0070403 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PIRSF000105|PS00067|PTHR23309|SSF48179|SSF51735 PGJ_RS03585 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|PTHR21060|PTHR21060:SF11|SSF53067|TIGR00016 PGJ_RS03590 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002505|IPR004614|IPR012147 Phosphate acetyl/butaryl transferase|Phosphate acetyl/butyryltransferase|Phosphate acetyltransferase GO:0008152|GO:0016407|GO:0016746 G3DSA:3.40.50.10750|PF01515|PIRSF000428|PTHR23406|PTHR23406:SF3|SSF53659|TIGR00651 PGJ_RS03595 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021457 Protein of unknown function DUF3108 PF11306 PGJ_RS03600 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000866|IPR012336|IPR017937|IPR025380 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Domain of unknown function DUF4369|Thioredoxin, conserved site|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0045454|GO:0055114 G3DSA:3.40.30.10|PF00578|PF14289|PS00194|PTHR10681|SSF52833 PGJ_RS03610 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005911|IPR006638|IPR007197|IPR023404|IPR032432 Elongator protein 3/MiaB/NifB|Protein YhcC-like|Radical SAM|Radical SAM, C-terminal extension|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|PF16199|PTHR11135|PTHR11135:SF1|SM00729|SSF102114|TIGR01212 PGJ_RS03615 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13508|SSF55729 PGJ_RS03620 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF606|SM00448|SM00862|SSF46894|SSF52172 PGJ_RS03625 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001667|IPR003156 DDH domain|DHHA1 domain GO:0003676 G3DSA:3.90.1640.10|PF01368|PF02272|SSF64182 PGJ_RS03630 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032252 Protein of unknown function DUF4827 PF16109 PGJ_RS03635 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066|IPR024086 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucosamine mutase, archaeal type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF48|SSF53738|SSF55957|TIGR03990 PGJ_RS03640 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001566|IPR002792|IPR010280|IPR012340|IPR029063|IPR030390|IPR030391 (Uracil-5)-methyltransferase family|23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD|Nucleic acid-binding, OB-fold|RNA methyltransferase TrmA, active site|RNA methyltransferase TrmA, conserved site|S-adenosyl-L-methionine-dependent methyltransferase|TRAM domain GO:0003723|GO:0006396|GO:0008173 G3DSA:2.40.50.140|G3DSA:3.40.50.150|PF01938|PF05958|PS01230|PS01231|PTHR11061|PTHR11061:SF30|SSF50249|SSF53335|TIGR00479 PGJ_RS03645 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013830|IPR014982 GSCFA|SGNH hydrolase-type esterase domain PF08885|SSF52266 PGJ_RS03650 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000713|IPR000821|IPR001608|IPR004101|IPR009006|IPR011079|IPR013221|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase/group IV decarboxylase, C-terminal|Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|PLP-binding barrel GO:0003824|GO:0005524|GO:0006522|GO:0008784|GO:0009058|GO:0016874 G3DSA:2.40.37.10|G3DSA:3.20.20.10|G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_01201|PF00842|PF01168|PF01225|PF08245|PR00992|PTHR30511|PTHR30511:SF0|SM01005|SSF50621|SSF51419|SSF53244|SSF53623|SSF63418|TIGR00492 PGJ_RS03655 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 PGJ_RS03670 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001347|IPR005486|IPR005488 Glucokinase regulatory protein, conserved site|N-acetylmuramic acid 6-phosphate etherase MurQ|Sugar isomerase (SIS) GO:0005975|GO:0016835|GO:0030246|GO:0046348 G3DSA:3.40.50.10490|PF01380|PS01272|PTHR10088|SSF53697|TIGR00274 PGJ_RS03675 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002731 ATPase, BadF/BadG/BcrA/BcrD type PF01869|PTHR12862|SSF53067 PGJ_RS03680 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001734|IPR031155 Sodium/solute symporter|Urea active transporter GO:0005215|GO:0006810|GO:0015204|GO:0016020|GO:0016021|GO:0055085|GO:0071918 PF00474|PTHR11819|PTHR11819:SF94 PGJ_RS03685 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SSF47729 PGJ_RS03690 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003593|IPR008824|IPR008921|IPR021886|IPR027417|IPR032423 AAA ATPase, C-terminal domain|AAA+ ATPase domain|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0006260|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.3710.10|G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF05496|PF12002|PF16193|PTHR13779|PTHR13779:SF7|SM00382|SSF48019|SSF52540 PGJ_RS03695 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002052|IPR007848|IPR022882|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|S-adenosyl-L-methionine-dependent methyltransferase|tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0003676|GO:0008168|GO:0016430|GO:0032259 G3DSA:3.40.50.150|MF_01872|PF05175|PS00092|PTHR18895|PTHR18895:SF73|SSF53335 PGJ_RS03700 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000394|IPR007046|IPR007634 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00718|PTHR32248|PTHR32248:SF4|TIGR02395 PGJ_RS03705 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000713|IPR004101|IPR005863|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0009058|GO:0016874|GO:0047480|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_02019|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF3|SSF53244|SSF53623|SSF63418|TIGR01143 PGJ_RS03710 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003190|IPR009010 Aspartate decarboxylase|Aspartate decarboxylase-like domain GO:0004068|GO:0006523 G3DSA:2.40.40.20|MF_00446|PD009294|PF02261|PIRSF006246|PTHR21012|PTHR21012:SF0|SSF50692|TIGR00223 PGJ_RS03715 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|PTHR11564|PTHR11564:SF7|SM00382|SM00962|SM00963|SSF47446|SSF52540|TIGR00959 PGJ_RS03720 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000672|IPR016040|IPR020630|IPR020631|IPR020867 NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0004488|GO:0009396|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00766|PS00767|PTHR10025|SSF51735|SSF53223 PGJ_RS03725 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF153|TIGR00797 PGJ_RS03730 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 PGJ_RS03735 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001226|IPR008254|IPR029039 Flavodoxin, conserved site|Flavodoxin/nitric oxide synthase|Flavoprotein-like domain GO:0009055|GO:0010181 G3DSA:3.40.50.360|PF12682|PS00201|PTHR39201|PTHR39201:SF1|SSF52218 PGJ_RS03740 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002312|IPR004364|IPR004365|IPR004522|IPR012340|IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Asparagine-tRNA ligase|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004816|GO:0005524|GO:0005737|GO:0006418|GO:0006421 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00534|PF00152|PF01336|PR01042|PTHR22594|PTHR22594:SF6|SSF50249|SSF55681|TIGR00457 PGJ_RS03745 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PTHR21600|PTHR21600:SF2|SM00363|SSF55120|SSF55174|TIGR00093 PGJ_RS03750 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000362|IPR004769|IPR008948|IPR013539|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase|Adenylosuccinate lyase PurB, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0006188|GO:0009152 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF08328|PR00149|PS00163|PTHR11444|PTHR11444:SF17|SSF48557|TIGR00928 PGJ_RS03755 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016030|IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type|Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like G3DSA:1.20.1200.10|PD007457|PF01923|PTHR12213|PTHR12213:SF0|SSF89028|TIGR00636 PGJ_RS03765 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006042|IPR006043 Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860|PS01116|PTHR11119|PTHR11119:SF49|TIGR00801 PGJ_RS03770 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PTHR30154|PTHR30154:SF2|SM00344|SSF46785|SSF54909 PGJ_RS03775 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003753|IPR020579|IPR025824 Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain GO:0003676|GO:0006308|GO:0008855|GO:0009318 MF_00378|PF02601|PF13742|PTHR30008|PTHR30008:SF0|TIGR00237 PGJ_RS03780 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000788|IPR013344|IPR013509 Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal|Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0005524|GO:0006260|GO:0031419|GO:0055114 G3DSA:3.20.70.20|PF00317|PF02867|PR01183|PTHR11573|PTHR11573:SF3|SSF51998|TIGR02504 PGJ_RS03785 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13374|PF13424|PTHR19959|PTHR19959:SF162|SM00028|SSF48452 PGJ_RS03790 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase, tRNA-binding arm|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|tRNA-binding arm GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438 G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|PTHR11946|PTHR11946:SF5|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422 PGJ_RS03805 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000103|IPR005982|IPR008255|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|PTHR22912|PTHR22912:SF48|SSF51905|TIGR01292 PGJ_RS03810 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003362 Bacterial sugar transferase PF02397|PTHR30576 PGJ_RS03815 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001962|IPR014729|IPR029055 Asparagine synthase|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|SSF52402|SSF56235 PGJ_RS03820 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic PF13440 PGJ_RS03825 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF15|SSF53383 PGJ_RS03830 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012336|IPR025380 Domain of unknown function DUF4369|Thioredoxin-like fold G3DSA:3.40.30.10|PF14289|SSF52833 PGJ_RS03835 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF16|SSF53448 PGJ_RS03840 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 PGJ_RS03850 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic PF14897 PGJ_RS03855 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028357 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|PTHR11374|PTHR11374:SF18|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 PGJ_RS03860 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000352|IPR004374|IPR005139 Peptide chain release factor|Peptide chain release factor 2|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:3.30.160.200|PF00472|PF03462|PS00745|PTHR11075|PTHR11075:SF6|SM00937|SSF75620 PGJ_RS03865 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.40.50.980|PF00501|PS00455|PTHR24096|PTHR24096:SF193|SSF56801 PGJ_RS03875 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 PGJ_RS03885 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001670|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00060|PTHR11496|PTHR11496:SF65|SSF56796 PGJ_RS03895 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025350 Protein of unknown function DUF4254 PF14063 PGJ_RS03900 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF7|SSF53756 PGJ_RS03905 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002942 RNA-binding S4 domain GO:0003723 G3DSA:3.10.290.10|PF01479|SM00363|SSF55174 PGJ_RS03910 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025668 Transposase DDE domain PF13612 PGJ_RS03915 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 MF_00024|PF03186|PTHR34308|PTHR34308:SF1|TIGR00380 PGJ_RS03920 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004838|IPR004839|IPR005860|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|L-threonine-O-3-phosphate decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0009236|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF338|SSF53383|TIGR01140 PGJ_RS03925 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002586|IPR004459|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyric acid synthase CobQ|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_00028|PF01656|PF07685|PTHR21343|PTHR21343:SF1|SSF52317|SSF52540|TIGR00313 PGJ_RS03930 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016030|IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type|Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like G3DSA:1.20.1200.10|PD007457|PF01923|PTHR12213|SSF89028|TIGR00636 PGJ_RS03935 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002586|IPR004484|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyrinic acid a,c-diamide synthase CbiA|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236|GO:0042242 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_00027|PF01656|PF07685|PTHR21343|PTHR21343:SF6|SSF52317|SSF52540|TIGR00379 PGJ_RS03940 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029464 Type I restriction enzyme R protein, N-terminal domain PF13588 PGJ_RS03945 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011335|IPR011856|IPR025420|IPR027417 Domain of unknown function DUF4143|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease type II-like|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|G3DSA:3.40.50.300|PF13173|PF13635|PTHR33295|PTHR33295:SF7|SSF52540|SSF52980 PGJ_RS03970 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006383|IPR023190|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564|GO:0008152|GO:0016791 G3DSA:1.10.150.210|G3DSA:3.40.50.1000|PF12710|PTHR10000|PTHR10000:SF7|SSF56784|TIGR00338|TIGR01488 PGJ_RS03975 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004017 Cysteine-rich domain PF02754|PTHR30296|PTHR30296:SF0 PGJ_RS03980 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003741|IPR009051|IPR017896|IPR017900|IPR024185 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|5-formyltetrahydrofolate cyclo-ligase-like domain|Alpha-helical ferredoxin|LUD domain GO:0051536 G3DSA:1.10.1060.10|G3DSA:3.40.50.10420|PF02589|PF13183|PS00198|PTHR32479|PTHR32479:SF10|SSF100950|SSF46548 PGJ_RS03985 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003741|IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain|LUD domain G3DSA:3.40.50.10420|PF02589|PTHR32479|PTHR32479:SF11|SSF100950 PGJ_RS03990 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR12418|PTHR12418:SF16|SSF54637 PGJ_RS03995 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006664|IPR006665|IPR008969|IPR011042|IPR011659|IPR011990|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|OmpA-like domain|Outer membrane protein, bacterial|Six-bladed beta-propeller, TolB-like|Tetratricopeptide-like helical domain|WD40-like Beta Propeller GO:0005515|GO:0009279|GO:0016021 G3DSA:1.25.40.10|G3DSA:2.120.10.30|G3DSA:2.60.40.1120|G3DSA:3.30.1330.60|PF00691|PF07676|PF13620|PR01021|PTHR30128|SSF103088|SSF48452|SSF49464|SSF82171 PGJ_RS04000 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007197|IPR013785|IPR024924 7-carboxy-7-deazaguanine synthase-like|Aldolase-type TIM barrel|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|MF_00917|PF04055|PF13353|PIRSF000370|PTHR11228|PTHR11228:SF6|SSF102114 PGJ_RS04005 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein G3DSA:3.30.479.10|PF01242|PTHR12589|SSF55620 PGJ_RS04010 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000169|IPR001300 Cysteine peptidase, cysteine active site|Peptidase C2, calpain, catalytic domain GO:0004198|GO:0005622|GO:0006508 G3DSA:3.90.70.10|PF00648|PS00139|SM00230|SSF54001 PGJ_RS04015 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|PTHR24567:SF38|SM00419|SSF46785|SSF51206 PGJ_RS04020 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|PTHR30204|PTHR30204:SF15|SM00422|SSF46955 PGJ_RS04025 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007016 O-antigen ligase-related PF04932 PGJ_RS04035 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003399 Mce/MlaD PF02470|PTHR33371|PTHR33371:SF4 PGJ_RS04040 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF01520|PTHR30404|PTHR30404:SF0|SM00646|SSF53187 PGJ_RS04050 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR032806 H repeat-associated protein, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF13808|PTHR30298 PGJ_RS04055 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001367|IPR007167|IPR008988|IPR011991|IPR022689 Ferrous iron transporter FeoA domain|Iron dependent repressor|Iron dependent repressor, metal binding and dimerisation domain|Transcriptional repressor, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355|GO:0046914|GO:0046983 G3DSA:1.10.10.10|G3DSA:1.10.60.10|PF02742|PF04023|PTHR33238|PTHR33238:SF1|SM00529|SM00899|SSF47979|SSF50037 PGJ_RS04060 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003373|IPR006073|IPR011619|IPR011640|IPR011642|IPR027417 Ferrous iron transport protein B|Ferrous iron transport protein B, C-terminal|Ferrous iron transport protein B, N-terminal|GTP binding domain|Nucleoside transporter/FeoB GTPase, Gate domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525|GO:0015093|GO:0015684|GO:0016021 G3DSA:3.40.50.300|PF02421|PF07664|PF07670|PR00326|PTHR11649|PTHR11649:SF37|SSF52540|TIGR00437 PGJ_RS04065 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008631 Glycogen synthase GO:0004373|GO:0005978 G3DSA:3.40.50.2000|PF05693|PTHR10176|PTHR10176:SF3|SSF53756 PGJ_RS04070 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004481|IPR004837 Sodium/calcium exchanger membrane region|Sodium/potassium/calcium exchanger GO:0016021|GO:0055085 PF01699|PTHR10846|TIGR00367 PGJ_RS04075 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001669|IPR011991|IPR020900 Arginine repressor|Arginine repressor, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355|GO:0006525 G3DSA:1.10.10.10|MF_00173|PF01316|PR01467|PTHR34471|PTHR34471:SF1|SSF46785 PGJ_RS04080 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|PTHR30443|SSF53649 PGJ_RS04085 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000212|IPR013986|IPR014016|IPR014017|IPR027417 DExx box DNA helicase domain|DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|PTHR11070|PTHR11070:SF7|SSF52540 PGJ_RS04095 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004602|IPR013815|IPR017871|IPR027417 ABC transporter, conserved site|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|PS00211|PTHR32282|PTHR32282:SF2|SSF52540|TIGR00630 PGJ_RS04100 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026341 Gliding motility-associated, C-terminal domain PF13585|TIGR04131 PGJ_RS04105 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF567|SM00382|SSF52540 PGJ_RS04110 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PF02405|PTHR30188 PGJ_RS04115 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026444 Secretion system C-terminal sorting domain TIGR04183 PGJ_RS04120 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006665|IPR011990|IPR019734 OmpA-like domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.30.1330.60|PF13181|SM00028|SSF48452 PGJ_RS04125 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005801|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0009058 G3DSA:3.60.120.10|PF00425|PR00095|PTHR11236|SSF56322 PGJ_RS04130 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|SSF56752 PGJ_RS04140 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR008969|IPR012910|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF07715|PF13715|PTHR30069|PTHR30069:SF9|SSF49464|SSF56935 PGJ_RS04145 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032627 Protein of unknown function DUF4876 PF16215 PGJ_RS04155 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000121|IPR002192|IPR008279|IPR010121|IPR013815|IPR013816|IPR015813|IPR018274|IPR023151 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate, phosphate dikinase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005524|GO:0006090|GO:0016301|GO:0016310|GO:0016772|GO:0050242 G3DSA:1.10.189.10|G3DSA:1.20.80.30|G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PIRSF000853|PS00370|PS00742|PTHR22931|PTHR22931:SF9|SSF51621|SSF52009|SSF56059|TIGR01828 PGJ_RS04160 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003107|IPR011990|IPR019734|IPR029035 DHS-like NAD/FAD-binding domain|HAT (Half-A-TPR) repeat|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0006396 G3DSA:1.25.40.10|G3DSA:3.40.50.1220|PF13181|PF13289|PF13431|PTHR23083|SM00028|SM00386|SSF48452|SSF52467 PGJ_RS04165 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003702|IPR017821|IPR026888 Acetyl-CoA hydrolase/transferase|Acetyl-CoA hydrolase/transferase C-terminal domain|Succinate CoA transferase GO:0003824|GO:0006084|GO:0016740 G3DSA:3.40.1080.10|G3DSA:3.40.810.20|PF02550|PF13336|PTHR21432|PTHR21432:SF10|SSF100950|TIGR03458 PGJ_RS04170 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002792|IPR005839|IPR006463|IPR006638|IPR007197|IPR012340|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Nucleic acid-binding, OB-fold|Radical SAM|Radical SAM, alpha/beta horseshoe|TRAM domain|tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0003824|GO:0005737|GO:0006400|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:2.40.50.140|G3DSA:3.80.30.20|MF_01864|PF00919|PF01938|PF04055|PS01278|PTHR11918|PTHR11918:SF43|SM00729|SSF102114|TIGR00089|TIGR01574 PGJ_RS04175 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF530|SM00382|SSF52540 PGJ_RS04190 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000524|IPR011991 Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF00392|PTHR38445|PTHR38445:SF2|SM00345|SSF46785 PGJ_RS04195 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR008969|IPR012910|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF07715|PF13715|PF14905|SSF49464|SSF56935 PGJ_RS04200 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021255 Putative auto-transporter adhesin, head GIN domain PF10988|PTHR39200|PTHR39200:SF1 PGJ_RS04205 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001375|IPR011042|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Six-bladed beta-propeller, TolB-like GO:0006508|GO:0008236 G3DSA:2.120.10.30|G3DSA:3.40.50.1820|PF00326|PTHR11731|PTHR11731:SF140|SSF53474|SSF82171 PGJ_RS04210 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469 PGJ_RS04220 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012550|IPR027369 DinB/YfiT-like putative metal-dependent hydrolase|Protein of unknown function DUF1706 G3DSA:1.20.120.450|PF08020|PIRSF031551|PTHR40658|PTHR40658:SF1|SSF109854 PGJ_RS04225 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011989|IPR014825|IPR016024 Armadillo-like helical|Armadillo-type fold|DNA alkylation repair enzyme GO:0005488 G3DSA:1.25.10.10|PF08713|SSF48371 PGJ_RS04230 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012893|IPR012894|IPR017508 HipA, N-terminal subdomain 1|HipA, N-terminal subdomain 2|HipA-like, C-terminal PF07804|PF07805|PF13657|PTHR30124|PTHR30124:SF2 PGJ_RS04235 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|SSF47413 PGJ_RS04245 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032806 H repeat-associated protein, N-terminal PF13808 PGJ_RS04250 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002314|IPR002320|IPR004095|IPR004154|IPR012675|IPR012676|IPR012947|IPR018163 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Beta-grasp domain|TGS|TGS-like|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0016876|GO:0043039 G3DSA:3.10.20.30|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF02824|PF03129|PF07973|PR01047|PTHR11451|PTHR11451:SF5|SM00863|SSF52954|SSF55186|SSF55681|SSF81271|TIGR00418 PGJ_RS04255 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001288|IPR019814|IPR019815 Translation initiation factor 3|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|PTHR10938|SSF54364|SSF55200|TIGR00168 PGJ_RS04260 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001706|IPR018265|IPR021137 Ribosomal protein L35|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00514|PF01632|PR00064|PS00936|PTHR33343|SSF143034|TIGR00001 PGJ_RS04265 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|MF_00382|PD002389|PF00453|PR00062|PS00937|PTHR10986|PTHR10986:SF12|SSF74731|TIGR01032 PGJ_RS04270 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008490 Transposase InsH, N-terminal PF05598|PTHR35604 PGJ_RS04280 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025348 Protein of unknown function DUF4252 PF14060 PGJ_RS04290 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 PGJ_RS04300 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000184 Bacterial surface antigen (D15) GO:0019867 G3DSA:2.40.160.50|PF01103|PTHR12815|PTHR12815:SF13 PGJ_RS04305 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013708|IPR016040 NAD(P)-binding domain|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF08501|PTHR21089|SSF51735|SSF53223 PGJ_RS04310 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004033|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|UbiE/COQ5 methyltransferase GO:0008168 G3DSA:3.40.50.150|MF_01813|PF01209|PTHR10108|PTHR10108:SF24|SSF53335|TIGR01934 PGJ_RS04315 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013816|IPR018236|IPR028923 ATP-grasp fold, subdomain 2|SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0005524|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01057|PS01058|PTHR11609|PTHR11609:SF9|SSF56104 PGJ_RS04320 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003714|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0005524 G3DSA:3.40.50.300|PF02562|PTHR30473|PTHR30473:SF1|SSF52540 PGJ_RS04325 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005887|IPR008928|IPR012939|IPR014718 Alpha-1,2-mannosidase, putative|Glycoside hydrolase-type carbohydrate-binding, subgroup|Glycosyl hydrolase family 92|Six-hairpin glycosidase-like GO:0003824|GO:0005975|GO:0030246 G3DSA:1.20.1050.60|G3DSA:1.20.1610.10|G3DSA:2.70.98.10|G3DSA:3.30.2080.10|PF07971|PTHR12143|PTHR12143:SF22|SSF48208|TIGR01180 PGJ_RS04330 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 G3DSA:2.40.10.240|G3DSA:3.40.1780.10|MF_00113|PF02547|PTHR30307|PTHR30307:SF0|SSF111337 PGJ_RS04345 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003959|IPR027417 ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF13304|PF13476|SSF52540 PGJ_RS04355 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003817|IPR033175 Phosphatidylserine decarboxylase, archaeal-type|Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 MF_00664|PF02666|PTHR35809|TIGR00164 PGJ_RS04360 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000462|IPR004533 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--serine O-phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066|PS00379|PTHR15362|PTHR15362:SF2|TIGR00473 PGJ_RS04370 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002314|IPR004154|IPR004499|IPR016061|IPR017449 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Proline-tRNA ligase, class II, C-terminal|Proline-tRNA ligase, class IIa, archaeal-type|Prolyl-tRNA synthetase, class II GO:0000166|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.110.30|G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_01571|PF00587|PF03129|PF09180|PTHR11451|PTHR11451:SF6|SM00946|SSF52954|SSF55681|SSF64586|TIGR00408 PGJ_RS04380 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003358|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 G3DSA:3.40.50.150|MF_01057|PF02390|PTHR23417|PTHR23417:SF14|SSF53335 PGJ_RS04385 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002744|IPR019591|IPR027417 Domain of unknown function DUF59|Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|MF_02040|PF01883|PF10609|PTHR23264|PTHR23264:SF19|SSF117916|SSF52540 PGJ_RS04390 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR017039 Virulence factor BrkB PF03631|PTHR30213|PTHR30213:SF0|TIGR00765 PGJ_RS04395 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002606|IPR004821|IPR014729|IPR015864|IPR015865|IPR023465|IPR023468 Cytidyltransferase-like domain|FAD synthetase|Riboflavin kinase|Riboflavin kinase domain|Riboflavin kinase domain, bacterial/eukaryotic|Riboflavin kinase, bacterial|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0003919|GO:0008531|GO:0009058|GO:0009231 G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PIRSF004491|PTHR22749|PTHR22749:SF0|SM00904|SSF52374|SSF82114|TIGR00083|TIGR00125 PGJ_RS04400 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|PTHR21666:SF200|SSF51261 PGJ_RS04405 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025634 Protein of unknown function DUF4292 PF14125 PGJ_RS04410 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13174|PF13181|PF13431|PF14559|PTHR23083|SM00028|SSF48452 PGJ_RS04415 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008180|IPR008181|IPR029054 Deoxyuridine triphosphate nucleotidohydrolase|Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0004170|GO:0016787|GO:0046080 G3DSA:2.70.40.10|MF_00116|PF00692|PTHR11241|SSF51283|TIGR00576 PGJ_RS04420 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 MF_00159|PF04551|PTHR30454|SSF56014|TIGR00612 PGJ_RS04425 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000031|IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE|Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189|GO:0034023 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|PTHR23046|PTHR23046:SF2|SM01001|SSF52255|TIGR01162 PGJ_RS04430 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002930|IPR003016|IPR011053|IPR017453 2-oxo acid dehydrogenase, lipoyl-binding site|Glycine cleavage system H-protein|Glycine cleavage system H-protein, subgroup|Single hybrid motif GO:0005960|GO:0019464 G3DSA:2.40.50.100|MF_00272|PF01597|PS00189|PTHR11715|SSF51230|TIGR00527 PGJ_RS04435 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005790|IPR010372|IPR027417 DNA polymerase III delta, N-terminal|DNA polymerase III, delta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF06144|PTHR34388|SSF52540|TIGR01128 PGJ_RS04440 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000845|IPR010944|IPR018017 AMP nucleosidase, putative|Nucleoside phosphorylase|Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PF01048|PTHR21234|PTHR21234:SF11|SSF53167|TIGR01721 PGJ_RS04445 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029464 Type I restriction enzyme R protein, N-terminal domain PF13588 PGJ_RS04450 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR025302|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Domain of unknown function DUF4162|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF13732|PS00211|PTHR24220|PTHR24220:SF450|SM00382|SSF52540 PGJ_RS04455 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic G3DSA:3.40.190.10|PF12698|PTHR41312|SSF53850 PGJ_RS04460 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS04465 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001757|IPR004014|IPR006068|IPR006408|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IIB GO:0000166|GO:0005388|GO:0005524|GO:0016020|GO:0016021|GO:0046872|GO:0070588 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR00119|PR00120|PS00154|PTHR24093|PTHR24093:SF254|SM00831|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01517 PGJ_RS04470 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic PF16412 PGJ_RS04475 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006043|IPR026033|IPR029940 AzgA purine transporter|Purine permease PbuG-like|Xanthine/uracil/vitamin C permease GO:0005215|GO:0005345|GO:0006810|GO:0006863|GO:0016020|GO:0055085 PF00860|PIRSF005353|PTHR11119|PTHR11119:SF9 PGJ_RS04480 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004424|IPR006204|IPR013750|IPR014721|IPR020568 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PF08544|PIRSF010376|PTHR20861|PTHR20861:SF2|SSF54211|SSF55060|TIGR00154 PGJ_RS04485 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006638|IPR007197|IPR013704|IPR020612|IPR022946|IPR023404|IPR024560 Elongator protein 3/MiaB/NifB|Methylthiotransferase, conserved site|Radical SAM|Radical SAM, alpha/beta horseshoe|Uncharacterised protein family UPF0313|Uncharacterised protein family UPF0313, C-terminal|Uncharacterised protein family UPF0313, N-terminal GO:0003824|GO:0051536|GO:0051539 G3DSA:3.80.30.20|PF04055|PF08497|PF11842|PS01278|PTHR32331|SM00729|SSF102114|TIGR03904 PGJ_RS04490 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PTHR23115|PTHR23115:SF91|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231 PGJ_RS04495 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004622|IPR027417 DNA polymerase III, delta prime subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003887|GO:0006260|GO:0008408 G3DSA:3.40.50.300|PF13177|PTHR11669|PTHR11669:SF8|SSF52540|TIGR00678 PGJ_RS04500 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005902|IPR010992 Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|SSF47729|TIGR01201 PGJ_RS04510 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011335|IPR025420|IPR027417 Domain of unknown function DUF4143|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease type II-like G3DSA:3.40.50.300|PF13173|PF13635|PTHR33295|PTHR33295:SF5|SSF52540|SSF52980 PGJ_RS04515 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001789|IPR011006|IPR013973|IPR017850 Alkaline-phosphatase-like, core domain|CheY-like superfamily|PglZ domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003824|GO:0008152 G3DSA:3.40.50.2300|PF00072|PF08665|PTHR26402|SM00448|SSF52172|SSF53649 PGJ_RS04520 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003442|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.40.50.300|PF02367|PTHR33540|SSF52540|TIGR00150 PGJ_RS04525 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029087 Immunity protein 17 PF15562 PGJ_RS04530 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001267|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Thymidine kinase GO:0004797|GO:0005524 G3DSA:3.30.60.20|MF_00124|PF00265|PIRSF035805|PTHR11441|SSF52540|SSF57716 PGJ_RS04535 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005519|IPR006423|IPR023214 5-nucleotidase lipoprotein e(P4)|Acid phosphatase, class B-like|HAD-like domain GO:0009279 G3DSA:3.40.50.1000|PF03767|PIRSF019271|PTHR31284|PTHR31284:SF10|SSF56784|TIGR01533 PGJ_RS04540 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000238|IPR015946|IPR023799 K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain GO:0006364 G3DSA:3.30.300.20|PD007327|PF02033|PTHR33515|SSF89919|TIGR00082 PGJ_RS04545 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30489 PGJ_RS04550 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|SSF53448 PGJ_RS04555 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002195|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Dihydroorotase, conserved site|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810|GO:0016812 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PS00483|PTHR11647|PTHR11647:SF1|SSF51338|SSF51556 PGJ_RS04565 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 PF04138|PTHR38459 PGJ_RS04590 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000253|IPR008984 Forkhead-associated (FHA) domain|SMAD/FHA domain GO:0005515 G3DSA:2.60.200.20|PF00498|SSF49879 PGJ_RS04595 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005130|IPR021144 Serine dehydratase-like, alpha subunit|Uncharacterised protein family UPF0597 MF_01845|PF03313|PIRSF006054|PTHR30501|PTHR30501:SF2 PGJ_RS04600 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005122|IPR026353 Hypoxanthine-DNA glycosylase|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|SM00986|SM00987|SSF52141|TIGR04274 PGJ_RS04605 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007298 Copper resistance lipoprotein NlpE PF04170 PGJ_RS04610 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002724|IPR016104|IPR016105 Pyruvoyl-dependent arginine decarboxylase|Pyruvoyl-dependent histidine/arginine decarboxylase|Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain GO:0006520|GO:0006527|GO:0008792|GO:0016831 G3DSA:3.50.20.10|PD010449|PF01862|PIRSF005216|PTHR40438|PTHR40438:SF1|SSF56271 PGJ_RS04620 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS04630 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13175|SSF52540 PGJ_RS04635 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR027351|IPR027417 (+) RNA virus helicase core domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01443|SSF52540 PGJ_RS04640 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005887|IPR008928|IPR012939|IPR014718 Alpha-1,2-mannosidase, putative|Glycoside hydrolase-type carbohydrate-binding, subgroup|Glycosyl hydrolase family 92|Six-hairpin glycosidase-like GO:0003824|GO:0005975|GO:0030246 G3DSA:1.20.1050.60|G3DSA:1.20.1610.10|G3DSA:2.70.98.10|G3DSA:3.30.2080.10|PF07971|PTHR12143|PTHR12143:SF22|SSF48208|TIGR01180 PGJ_RS04645 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR027853 Protein of unknown function DUF4492 PF14899 PGJ_RS04650 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654|PTHR30365|PTHR30365:SF0 PGJ_RS04655 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322|PTHR30365|PTHR30365:SF6 PGJ_RS04660 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PTHR14226|PTHR14226:SF37|SSF52151 PGJ_RS04665 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006047|IPR013780|IPR013781|IPR015902|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PTHR10357|PTHR10357:SF126|SM00642|SSF51445 PGJ_RS04670 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004199|IPR006101|IPR006102|IPR006103|IPR006104|IPR008979|IPR011013|IPR013781|IPR013812|IPR014718|IPR017853|IPR023230|IPR023232|IPR032312 Beta galactosidase small chain/ domain 5|Beta-galactosidase, domain 4|Galactose mutarotase-like domain|Galactose-binding domain-like|Glycoside hydrolase family 2, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 2|Glycoside hydrolase, family 2, active site|Glycoside hydrolase, family 2, conserved site|Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich|Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain|Glycoside hydrolase-type carbohydrate-binding, subgroup|Glycosyl hydrolases family 2, sugar binding domain GO:0003824|GO:0004553|GO:0004565|GO:0005975|GO:0009341|GO:0030246 G3DSA:2.60.120.260|G3DSA:2.60.40.320|G3DSA:2.70.98.10|G3DSA:3.20.20.80|PF00703|PF02836|PF02837|PF02929|PF16353|PR00132|PS00608|PS00719|PTHR10066|PTHR10066:SF72|SM01038|SSF49303|SSF49785|SSF51445|SSF74650 PGJ_RS04680 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001405|IPR020891|IPR025657 RadC protein|RadC-like JAB domain|Uncharacterised protein family UPF0758, conserved site G3DSA:3.40.140.10|PF04002|PS01302|PTHR30471|PTHR30471:SF3|SSF102712|TIGR00608 PGJ_RS04685 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004137|IPR010048|IPR011254|IPR016099|IPR016100 Hydroxylamine reductase|Hydroxylamine reductase/Ni-containing CO dehydrogenase|Prismane, alpha-bundle|Prismane-like|Prismane-like, alpha/beta-sandwich GO:0003824|GO:0005737|GO:0016491|GO:0016661|GO:0051536|GO:0055114 G3DSA:1.20.1270.20|G3DSA:3.40.50.2030|MF_00069|PF03063|PIRSF000076|PTHR30109|PTHR30109:SF0|SSF56821|TIGR01703 PGJ_RS04690 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001952|IPR017849|IPR017850 Alkaline phosphatase|Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152|GO:0016791 G3DSA:3.40.720.10|PF00245|PR00113|PTHR11596|PTHR11596:SF51|SM00098|SSF53649 PGJ_RS04695 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000587|IPR000994|IPR028980|IPR029149 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|PTHR10804|PTHR10804:SF48|SSF53092|SSF55920 PGJ_RS04700 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000550|IPR010181 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK|CGCAxxGCC motif GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|PF09719|SSF55083 PGJ_RS04705 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002701|IPR006218|IPR013785|IPR020822 Aldolase-type TIM barrel|Chorismate mutase|Chorismate mutase, type II|DAHP synthetase I/KDSA GO:0003824|GO:0009058|GO:0046417 G3DSA:1.20.59.10|G3DSA:3.20.20.70|PF00793|PF01817|PTHR21057|PTHR21057:SF7|SM00830|SSF48600|SSF51569 PGJ_RS04710 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PF13439|SSF53756 PGJ_RS04720 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13480|SSF55729 PGJ_RS04725 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003593|IPR013765|IPR020584|IPR023400|IPR027417 AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094 G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|PTHR22942|PTHR22942:SF1|SM00382|SSF52540|SSF54752|TIGR02012 PGJ_RS04730 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|PTHR10681|PTHR10681:SF113|SSF52833 PGJ_RS04740 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027266|IPR027368|IPR027417 GTP binding domain|GTP-binding protein TrmE, N-terminal|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|MnmE, helical domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE|tRNA modification GTPase MnmE domain 2 GO:0003924|GO:0005515|GO:0005525|GO:0005622|GO:0006400 G3DSA:1.20.120.430|G3DSA:3.30.1360.120|G3DSA:3.40.50.300|MF_00379|PF01926|PF10396|PF12631|PR00326|PTHR11649|PTHR11649:SF56|SSF52540|TIGR00231|TIGR00450 PGJ_RS04745 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009061 Putative DNA-binding domain PF12728|SSF46955 PGJ_RS04750 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR011010|IPR013762|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PF13102|PTHR30349|PTHR30349:SF22|SSF56349 PGJ_RS04760 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009061|IPR010093 Putative DNA-binding domain|SinI-like, DNA-binding domain GO:0003677 PF12728|SSF46955|TIGR01764 PGJ_RS04765 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025048 Protein of unknown function DUF3987) PF13148 PGJ_RS04775 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008687 Bacterial mobilisation PF05713 PGJ_RS04780 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 PGJ_RS04795 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF14659|PTHR30349|PTHR30349:SF20|SSF56349 PGJ_RS04800 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF2|SSF116734 PGJ_RS04810 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF7|SSF116734 PGJ_RS04815 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002052|IPR003356|IPR004546|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|Restriction endonuclease, type I, HsdM|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0009007|GO:0009307|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|PTHR30408|PTHR30408:SF4|SSF53335|TIGR00497 PGJ_RS04820 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018306 Bacteriophage T5, Orf172 DNA-binding PF10544|SM00974 PGJ_RS04825 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004473|IPR006935|IPR007409|IPR014001|IPR022625|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, type I, HsdR|Restriction endonuclease, type I, HsdR, N-terminal|Type-1 restriction enzyme R protein, C-terminal GO:0003677|GO:0004519|GO:0005524|GO:0006304|GO:0009035|GO:0009307|GO:0016787 G3DSA:3.40.50.300|PF04313|PF04851|PF12008|PTHR30195|PTHR30195:SF16|SM00487|SSF52540|TIGR00348 PGJ_RS04830 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001387|IPR010982|IPR017507 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Transcription regulator, HipB-like GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413|TIGR03070 PGJ_RS04835 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SM00028|SSF48452 PGJ_RS04840 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001387|IPR010982|IPR017507 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Transcription regulator, HipB-like GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SSF47413|TIGR03070 PGJ_RS04845 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012893|IPR012894|IPR017508 HipA, N-terminal subdomain 1|HipA, N-terminal subdomain 2|HipA-like, C-terminal PF07804|PF07805|PF13657|PTHR37419|PTHR37419:SF2 PGJ_RS04850 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 PGJ_RS04855 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025506 Protein of unknown function DUF4393 PF14337 PGJ_RS04860 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000119|IPR005902|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|PF00216|SSF47729|TIGR01201 PGJ_RS04865 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS04875 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR011010|IPR013762|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PF13102|PTHR30349|PTHR30349:SF26|SSF56349 PGJ_RS04880 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR015082 Protein of unknown function DUF1896 G3DSA:1.10.8.330|G3DSA:1.10.8.340|PF08989|SSF140753 PGJ_RS04890 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS04895 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008490 Transposase InsH, N-terminal PF05598|PTHR35604 PGJ_RS04905 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000085|IPR003583|IPR010994|IPR011114|IPR012340|IPR013849 Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|DNA helicase, Holliday junction RuvA type, domain III, C-terminal|Helix-hairpin-helix DNA-binding motif, class 1|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003677|GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 G3DSA:1.10.150.20|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|PF14520|PTHR33796|SM00278|SSF46929|SSF47781|SSF50249|TIGR00084 PGJ_RS04910 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR023614|IPR025684|IPR026377 Cell surface SprA|Gliding motility protein SprA N-terminal domain|Porin domain G3DSA:2.40.160.10|PF14349|TIGR04189 PGJ_RS04915 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006027|IPR011605 NusB antitermination factor|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|PF01029|PTHR11078|SSF48013|TIGR01951 PGJ_RS04920 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000683|IPR010190|IPR016040|IPR032094 Diaminopimelate dehydrogenase, Ddh|Meso-diaminopimelate D-dehydrogenase, C-terminal|NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0009089|GO:0016491|GO:0047850 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF16654|PIRSF025648|PTHR31873|SSF51735|SSF55347|TIGR01921 PGJ_RS04925 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|PTHR30589|PTHR30589:SF0|TIGR00544 PGJ_RS04930 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001226|IPR001279|IPR008254|IPR016440|IPR029039 Flavodoxin, conserved site|Flavodoxin/nitric oxide synthase|Flavoprotein-like domain|Metallo-beta-lactamase|Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 G3DSA:3.40.50.360|G3DSA:3.60.15.10|PF00258|PF00753|PIRSF005243|PS00201|PTHR32145|PTHR32145:SF2|SM00849|SSF52218|SSF56281 PGJ_RS04935 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004547|IPR006148|IPR018321 Glucosamine-6-phosphate isomerase|Glucosamine-6-phosphate isomerase, conserved site|Glucosamine/galactosamine-6-phosphate isomerase GO:0004342|GO:0005975|GO:0006044 G3DSA:3.40.50.1360|MF_01241|PF01182|PS01161|PTHR11280|SSF100950|TIGR00502 PGJ_RS04940 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004099|IPR006258|IPR012999|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF125|SSF51905|SSF55424|TIGR01350 PGJ_RS04945 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002646|IPR006674|IPR006675|IPR032828 HD domain|HDIG domain|Poly A polymerase, head domain|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0003723|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|PF01743|PF01966|PF12627|PTHR13734|PTHR13734:SF5|SSF81301|SSF81891|TIGR00277 PGJ_RS04950 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002938|IPR023753|IPR028348 FAD dependent protein|FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PIRSF038984|PR00411|PTHR10617|PTHR10617:SF52|SSF51905 PGJ_RS04960 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001412|IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR015413|IPR025709 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Leucyl tRNA synthetase|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF09334|PF13603|PR00985|PS00178|PTHR11946|PTHR11946:SF7|SSF47323|SSF50677|SSF52374|TIGR00396 PGJ_RS04965 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006214 Bax inhibitor 1-related PF01027|PTHR23291|PTHR23291:SF42 PGJ_RS04970 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PTHR32282|PTHR32282:SF11|SSF53955|SSF56601 PGJ_RS04975 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009164|IPR029052 Fructose-1,6-bisphosphatase class 3|Metallo-dependent phosphatase-like GO:0006094|GO:0042132 G3DSA:3.60.21.10|MF_01854|PF06874|PIRSF000906|SSF56300 PGJ_RS04985 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR22573|PTHR22573:SF56|SSF53271 PGJ_RS04990 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000850|IPR027417 Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006139|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PR00094|PS00113|PTHR23359|SSF52540 PGJ_RS04995 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006073|IPR006074|IPR006169|IPR014100|IPR027417 GTP binding domain|GTP-binding protein Obg/CgtA|GTP1/OBG domain|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0003924|GO:0005525 G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PIRSF002401|PR00326|PS00905|PTHR11702|PTHR11702:SF3|SSF52540|SSF82051|TIGR02729 PGJ_RS05000 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005146|IPR020825 B3/B4 tRNA-binding domain|Phenylalanyl-tRNA synthetase, B3/B4 GO:0003723|GO:0004826 G3DSA:3.50.40.10|PF03483|PTHR39209|SM00873|SSF56037 PGJ_RS05005 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008969|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain G3DSA:2.60.40.1120|PF13715|PTHR11532|PTHR11532:SF58|SSF49464 PGJ_RS05010 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026444 Secretion system C-terminal sorting domain TIGR04183 PGJ_RS05015 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|PTHR33446|PTHR33446:SF2|SSF74653|TIGR01352 PGJ_RS05020 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|PTHR12001|PTHR12001:SF23|SSF48576 PGJ_RS05025 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001130|IPR015991|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family|Uncharacterised deoxyribonuclease TatD-type GO:0004536|GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01090|PS01091|PTHR10060|PTHR10060:SF21|SSF51556|TIGR00010 PGJ_RS05035 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625|PTHR30625:SF8 PGJ_RS05045 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472 PGJ_RS05050 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472 PGJ_RS05055 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000905|IPR022496 Gcp-like domain|tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 G3DSA:3.30.420.40|PF00814|PTHR11735|PTHR11735:SF11|SSF53067|TIGR03725 PGJ_RS05060 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012255|IPR014729|IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055 G3DSA:3.40.50.620|PF01012|PIRSF000090|PTHR21294|PTHR21294:SF0|SM00893|SSF52402 PGJ_RS05065 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001308|IPR014729|IPR014730|IPR014731|IPR018206|IPR029035 DHS-like NAD/FAD-binding domain|Electron transfer flavoprotein alpha subunit/FixB|Electron transfer flavoprotein subunit alpha, conserved site|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|PIRSF000089|PS00696|PTHR10909|PTHR10909:SF294|SM00893|SSF52402|SSF52467 PGJ_RS05070 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786|IPR020964 Acyl-CoA dehydrogenase, C-terminal|Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.120.470|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF12186|PS00073|PTHR10909|PTHR10909:SF186|SSF158494|SSF47203|SSF56645 PGJ_RS05085 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003961|IPR013783 Fibronectin type III|Immunoglobulin-like fold GO:0005515 G3DSA:2.60.40.10|SSF49265 PGJ_RS05090 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021365 Protein of unknown function DUF2891 PF11199 PGJ_RS05095 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002044|IPR003385|IPR013781|IPR013783|IPR013784|IPR017853 Carbohydrate binding module family 20|Carbohydrate-binding-like fold|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 77|Immunoglobulin-like fold GO:0004134|GO:0005975|GO:0030246|GO:2001070 G3DSA:2.60.40.10|G3DSA:3.20.20.80|PF00686|PF02446|PTHR32518|PTHR32518:SF3|SM01065|SSF49452|SSF51445 PGJ_RS05100 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0000175|GO:0003676|GO:0003723|GO:0004654|GO:0006396|GO:0006402 G3DSA:1.10.10.400|G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|PTHR11252|PTHR11252:SF0|SM00316|SM00322|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591 PGJ_RS05105 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005215|IPR008880|IPR008881|IPR027304 Trigger factor|Trigger factor, C-terminal|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.30.70.1050|PF05697|PTHR30560|SSF102735|SSF109998|TIGR00115 PGJ_RS05110 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS05115 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PTHR23083|SM00028|SSF48452 PGJ_RS05120 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001567|IPR024077|IPR024079|IPR024080 Metallopeptidase, catalytic domain|Neurolysin/Thimet oligopeptidase, N-terminal|Neurolysin/Thimet oligopeptidase, domain 2|Peptidase M3A/M3B GO:0004222|GO:0006508|GO:0008237 G3DSA:1.10.1370.10|G3DSA:1.20.1050.40|G3DSA:3.40.390.10|PF01432|PTHR11804|PTHR11804:SF47|SSF55486 PGJ_RS05130 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR019219 Protein of unknown function DUF2130 PF09903|PIRSF005850 PGJ_RS05145 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025668 Transposase DDE domain PF13612 PGJ_RS05150 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005902|IPR010992 Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|SSF47729|TIGR01201 PGJ_RS05155 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001406|IPR020094|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, N-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|PTHR11142|PTHR11142:SF0|SSF55120|TIGR00071 PGJ_RS05160 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000380|IPR003601|IPR003602|IPR005733|IPR006171|IPR013497|IPR013824|IPR013825|IPR023405|IPR023406|IPR025589|IPR028612 DNA topoisomerase I, bacterial-type|DNA topoisomerase I, type IA|DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|Topoisomerase C-terminal repeat|Toprim domain GO:0003677|GO:0003916|GO:0003917|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.40.50.140|MF_00952|PF01131|PF01751|PF13368|PR00417|PS00396|PTHR11390|PTHR11390:SF27|SM00436|SM00437|SM00493|SSF56712|TIGR01051 PGJ_RS05165 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001539|IPR020988 Peptidase U32|Peptidase U32, collagenase GO:0006508|GO:0008233 PF01136|PF12392|PS01276|PTHR30217|PTHR30217:SF10 PGJ_RS05170 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029057 Phosphoribosyltransferase-like G3DSA:3.40.50.2020|PF14681|PTHR10285|PTHR10285:SF46|SSF53271 PGJ_RS05175 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025665 Outer membrane protein beta-barrel domain PF13568 PGJ_RS05180 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF4|SSF53448 PGJ_RS05190 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 PGJ_RS05195 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000014|IPR003594|IPR004358 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF02518|PF13188|PR00344|PTHR24423|SM00387|SSF55785|SSF55874 PGJ_RS05200 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR10374|PTHR10374:SF8|SSF54593 PGJ_RS05205 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001537|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PTHR12029|SSF55315|SSF75217 PGJ_RS05210 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|PTHR21666|SSF54001 PGJ_RS05215 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001279|IPR013471 Metallo-beta-lactamase|Ribonuclease Z/BN GO:0016891|GO:0042779 G3DSA:3.60.15.10|MF_01818|PF00753|PF12706|PTHR12553|SSF56281|TIGR02651 PGJ_RS05220 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016192|IPR016193|IPR028883 APOBEC/CMP deaminase, zinc-binding|Cytidine deaminase-like|tRNA-specific adenosine deaminase GO:0002100|GO:0003824|GO:0008251|GO:0008270|GO:0016787 G3DSA:3.40.140.10|MF_00972|PF14437|PS00903|PTHR11079|PTHR11079:SF72|SSF53927 PGJ_RS05230 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001352|IPR012337|IPR022898|IPR024567 Ribonuclease H-like domain|Ribonuclease HII|Ribonuclease HII/HIII|Ribonuclease HII/HIII domain GO:0003676|GO:0003723|GO:0004523 G3DSA:3.30.420.10|MF_00052_B|PF01351|PTHR10954|SSF53098 PGJ_RS05235 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000192|IPR010970|IPR015421|IPR015422|IPR015424|IPR016454 Aminotransferase class V domain|Cysteine desulfurase|Cysteine desulfurase, SufS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006534|GO:0030170|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|PTHR11601|PTHR11601:SF17|SSF53383|TIGR01979 PGJ_RS05240 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR23026|PTHR23026:SF90|SSF55469 PGJ_RS05245 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001783|IPR017938|IPR023366|IPR026017 ATP synthase subunit alpha-like domain|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.20|PF00677|PIRSF000498|PTHR21098|SSF63380|TIGR00187 PGJ_RS05255 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005543 PASTA domain PF03793|SM00740|SSF54184 PGJ_RS05260 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PF01479|PS01129|PTHR11079|PTHR11079:SF73|SM00363|SSF55120|SSF55174|TIGR00005 PGJ_RS05265 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PIRSF039102|PS00843|PS00844|PTHR23132|SSF52440|SSF56059 PGJ_RS05270 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PF01553|PTHR30068|PTHR30068:SF3|SSF69593 PGJ_RS05275 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013229 PEGA PF08308 PGJ_RS05280 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PR00413|PTHR12725|PTHR12725:SF63|SSF56784|TIGR01509 PGJ_RS05285 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001375|IPR011659|IPR015943|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0006508|GO:0008236 G3DSA:2.130.10.10|G3DSA:3.40.50.1820|PF00326|PF07676|PTHR11731|PTHR11731:SF150|SSF53474|SSF82171 PGJ_RS05290 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|PTHR21666|SSF54001 PGJ_RS05295 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF545|SM00448|SM00862|SSF52172 PGJ_RS05300 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|G3DSA:3.30.460.20|PF01544|PTHR21535|PTHR21535:SF40|SSF143865|SSF144083 PGJ_RS05305 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005627|IPR023648 Copper homeostasis CutC domain|Copper homeostasis protein CutC GO:0005507|GO:0055070 G3DSA:3.20.20.380|MF_00795|PF03932|PTHR12598|PTHR12598:SF0|SSF110395 PGJ_RS05315 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025567 Domain of unknown function DUF4332 PF14229 PGJ_RS05320 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0008152 G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|PTHR11922|PTHR11922:SF7|SSF52317|TIGR00566 PGJ_RS05325 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000014|IPR013656 PAS domain|PAS fold-4 G3DSA:3.30.450.20|PF08448|SSF55785 PGJ_RS05330 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000209|IPR015500|IPR022398|IPR023828|IPR026444 Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain|Secretion system C-terminal sorting domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|PR00723|PS00137|PS00138|PTHR10795|PTHR10795:SF419|SSF52743|TIGR04183 PGJ_RS05335 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000774|IPR001179|IPR023566 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 G3DSA:1.10.287.460|G3DSA:3.10.50.40|PF00254|PF01346|PTHR10516|PTHR10516:SF320|SSF54534 PGJ_RS05340 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000774|IPR001179|IPR023566 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 G3DSA:1.10.287.460|G3DSA:3.10.50.40|PF00254|PF01346|PTHR10516|PTHR10516:SF320|SSF54534 PGJ_RS05345 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000774|IPR001179|IPR023566 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 G3DSA:1.10.287.460|G3DSA:3.10.50.40|PF00254|PF01346|PTHR10516|PTHR10516:SF320|SSF54534 PGJ_RS05350 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR008969|IPR012910|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF07715|PF13715|PTHR30069|PTHR30069:SF2|SSF49464|SSF56935 PGJ_RS05355 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005184 Domain of unknown function DUF306, Meta/HslJ PF03724 PGJ_RS05360 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001920|IPR004391|IPR015942|IPR018187|IPR033134 Asp/Glu racemase|Asp/Glu racemase, active site 1|Asp/Glu racemase, active site 2|Asp/Glu/hydantoin racemase|Glutamate racemase GO:0006807|GO:0008152|GO:0008881|GO:0009252|GO:0016855|GO:0036361 G3DSA:3.40.50.1860|MF_00258|PF01177|PS00923|PS00924|PTHR21198|PTHR21198:SF2|SSF53681|TIGR00067 PGJ_RS05365 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013078|IPR017578|IPR029033 Alpha-ribazole phosphatase, CobC|Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 GO:0009236|GO:0043755 G3DSA:3.40.50.1240|PF00300|PTHR23029|PTHR23029:SF1|SM00855|SSF53254|TIGR03162 PGJ_RS05370 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 MF_00719|PF02654|PTHR34148|PTHR34148:SF1 PGJ_RS05375 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003200|IPR017846|IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009163|GO:0009236 G3DSA:1.10.1610.10|G3DSA:3.40.50.10210|MF_00230|PF02277|PTHR21712|PTHR21712:SF4|SSF52733|TIGR03160 PGJ_RS05380 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003203|IPR027417 Cobinamide kinase/cobinamide phosphate guanyltransferase|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0009236|GO:0043752|GO:0051188 G3DSA:3.40.50.300|PF02283|PIRSF006135|PTHR34848|SSF52540 PGJ_RS05390 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS05395 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS05400 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000811|IPR011834|IPR024517 Alpha-glucan phosphorylase|Glycogen phosphorylase, domain of unknown function DUF3417|Glycosyl transferase, family 35 GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PF11897|PIRSF000460|PTHR11468|PTHR11468:SF9|SSF53756|TIGR02094 PGJ_RS05405 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012336|IPR033395 Domain of unknown function DUF5106|Thioredoxin-like fold G3DSA:3.40.30.10|PF13905|PF17127|SSF52833 PGJ_RS05410 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006664|IPR006665|IPR006690 OmpA-like domain|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PS01068|PTHR30128|PTHR30128:SF17|SSF103088 PGJ_RS05415 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006665|IPR006690 OmpA-like domain|Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PS01068|PTHR30128|PTHR30128:SF17|SSF103088 PGJ_RS05420 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004925|IPR009075|IPR009100|IPR024674|IPR024719 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|HpaB/PvcC/4-BUDH|HpaB/PvcC/4-BUDH C-terminal|HpaB/PvcC/4-BUDH N-terminal GO:0008152|GO:0016627|GO:0055114 G3DSA:1.10.3140.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF03241|PF11794|PIRSF000331|PTHR36117|PTHR36117:SF2|SSF47203|SSF56645 PGJ_RS05425 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001075|IPR012336 NIF system FeS cluster assembly, NifU, C-terminal|Thioredoxin-like fold GO:0005506|GO:0016226|GO:0051536 G3DSA:3.40.30.10|PD002830|PF01106|SSF117916 PGJ_RS05430 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003702|IPR026888 Acetyl-CoA hydrolase/transferase|Acetyl-CoA hydrolase/transferase C-terminal domain GO:0003824|GO:0006084 G3DSA:3.40.1080.10|G3DSA:3.40.810.20|PF02550|PF13336|PTHR21432|PTHR21432:SF18|SSF100950 PGJ_RS05435 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001670|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00060|PTHR11496|PTHR11496:SF68|SSF56796 PGJ_RS05440 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PTHR11699|PTHR11699:SF168|SSF53720 PGJ_RS05445 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000014|IPR012312|IPR015077 Domain of unknown function DUF1858|Haemerythrin-like|PAS domain G3DSA:1.10.3910.10|G3DSA:1.20.120.520|G3DSA:3.30.450.20|PF01814|PF08984|PF13596|PTHR24423|PTHR24423:SF558|SSF55785 PGJ_RS05450 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF342|SM00382|SSF52540 PGJ_RS05455 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30489|PTHR30489:SF5 PGJ_RS05460 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30572|PTHR30572:SF4 PGJ_RS05465 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30572|PTHR30572:SF4 PGJ_RS05475 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13437|PTHR32347|PTHR32347:SF14|SSF111369|TIGR01730 PGJ_RS05480 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30026|SSF56954 PGJ_RS05485 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF2|SSF52499 PGJ_RS05490 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005097|IPR016040|IPR032095 NAD(P)-binding domain|Saccharopine dehydrogenase, C-terminal|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF03435|PF16653|PTHR12286|PTHR12286:SF6|SSF51735 PGJ_RS05495 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24319|PTHR24319:SF32|SSF51735 PGJ_RS05500 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002880|IPR011766|IPR017721|IPR029061 Indolepyruvate ferredoxin oxidoreductase, alpha subunit|Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0016491|GO:0030976|GO:0043805|GO:0055114 G3DSA:3.40.50.970|PF01855|PF02775|PIRSF006439|PTHR18968|PTHR18968:SF91|SSF52518 PGJ_RS05505 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002869|IPR019752 Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016491|GO:0016903|GO:0055114 G3DSA:3.40.920.10|PF01558|PTHR32154|PTHR32154:SF22|SSF53323 PGJ_RS05510 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF73|SM00382|SSF52540 PGJ_RS05515 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, permease protein GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|PTHR30472|PTHR30472:SF32|SSF81345 PGJ_RS05520 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|PTHR30535|PTHR30535:SF11|SSF53807 PGJ_RS05525 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 G3DSA:3.40.50.1400|PF06180|PIRSF033579|SSF53800 PGJ_RS05530 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR008969|IPR012910|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF07715|PF13715|PTHR30069|PTHR30069:SF2|SSF49464|SSF56935 PGJ_RS05535 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR011010|IPR013762|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PF13102|PTHR30349|PTHR30349:SF26|SSF56349 PGJ_RS05540 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PTHR35810 PGJ_RS05545 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|PTHR34585|PTHR34585:SF11|SSF46955 PGJ_RS05550 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PTHR34585|PTHR34585:SF10|SSF46955 PGJ_RS05555 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057|IPR009061 Homeodomain-like|Putative DNA-binding domain GO:0003677 G3DSA:1.10.10.60|PF12728|PTHR34585|PTHR34585:SF13|SSF46955 PGJ_RS05560 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|PTHR34585|PTHR34585:SF7|SSF46955 PGJ_RS05565 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001650|IPR003356|IPR027417|IPR029063 DNA methylase, adenine-specific|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0006306|GO:0008170 G3DSA:3.40.50.150|G3DSA:3.40.50.300|PF00271|PF02384|PR00507|SSF52540|SSF53335 PGJ_RS05570 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR015082 Protein of unknown function DUF1896 G3DSA:1.10.8.330|G3DSA:1.10.8.340|PF08989|SSF140753 PGJ_RS05575 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000380|IPR003601|IPR003602|IPR006171|IPR013497|IPR013824|IPR013826|IPR023405|IPR025589 DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 3|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|Topoisomerase C-terminal repeat|Toprim domain GO:0003677|GO:0003916|GO:0003917|GO:0006265 G3DSA:1.10.290.10|G3DSA:1.10.460.10|G3DSA:3.40.50.140|PF01131|PF01751|PF13342|PR00417|PTHR11390|PTHR11390:SF21|SM00436|SM00437|SM00493|SSF56712 PGJ_RS05580 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025222|IPR025343 Protein of unknown function DUF3945|Protein of unknown function DUF4099 PF13101|PF13351 PGJ_RS05585 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|SSF46689 PGJ_RS05590 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013747|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF08541|PTHR34069|PTHR34069:SF2|SSF53901 PGJ_RS05595 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007197|IPR013785 Aldolase-type TIM barrel|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13353|PTHR11228|PTHR11228:SF5|SSF102114 PGJ_RS05600 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008969|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain G3DSA:2.60.40.1120|PF14905|SSF49464|SSF56935 PGJ_RS05605 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR005074|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0006810|GO:0008233|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PF03412|PS00211|PTHR24221|PTHR24221:SF138|SM00382|SSF52540|SSF90123 PGJ_RS05615 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018534 Tetracycline regulation of excision, RteC PF09357 PGJ_RS05625 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025988|IPR027417|IPR032689 P-loop containing nucleoside triphosphate hydrolase|TraD/TraG, TraM recognition site|YWFCY domain G3DSA:3.40.50.300|PF12696|PF14293|SSF52540 PGJ_RS05630 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 PGJ_RS05640 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PTHR13696|PTHR13696:SF52|SSF52540 PGJ_RS05645 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 PGJ_RS05650 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 PGJ_RS05660 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PTHR13696|SSF52540 PGJ_RS05670 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025408 Protein of unknown function DUF4134 PF13572 PGJ_RS05675 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025407 Protein of unknown function DUF4133 PF13571 PGJ_RS05680 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR022509|IPR024451|IPR027417 Conjugation system ATPase, TraG|Domain of unknown function DUF3875|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF12991|PTHR38467|SSF52540|TIGR03783 PGJ_RS05685 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025415 Protein of unknown function DUF4141 PF13605 PGJ_RS05690 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012424|IPR022393 Conjugative transposon, TraJ|Conjugative transposon, TraJ, C-terminal PF07863|TIGR03782 PGJ_RS05695 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007430|IPR022276 Bacterial virulence protein VirB8|Conjugative transposon, TraK GO:0016020 PF04335|TIGR03781 PGJ_RS05700 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025050 Protein of unknown function DUF3989 PF13150 PGJ_RS05705 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR022187 Conjugative transposon, TraM PF12508|TIGR03779 PGJ_RS05710 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR022298 Conjugative transposon, TraN PF13595|TIGR03780 PGJ_RS05715 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018899 Conjugative transposon, TraO PF10626 PGJ_RS05720 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|PF01807|PF13155|SSF56731|SSF57783 PGJ_RS05725 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR024355 Protein of unknown function DUF3872 PF12988 PGJ_RS05730 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR023346|IPR023347 Lysozyme domain|Lysozyme-like domain GO:0003796 G3DSA:1.10.530.40|SSF53955 PGJ_RS05745 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025586 PcfJ-like protein PF14284 PGJ_RS05750 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009899 Antirestriction PF07275 PGJ_RS05755 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025624 PcfK-like protein PF14058 PGJ_RS05780 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.90.1200.10|PF01636|SSF56112 PGJ_RS05785 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004199|IPR006101|IPR006102|IPR006103|IPR006104|IPR008979|IPR011013|IPR013781|IPR013812|IPR014718|IPR017853|IPR032312 Beta galactosidase small chain/ domain 5|Beta-galactosidase, domain 4|Galactose mutarotase-like domain|Galactose-binding domain-like|Glycoside hydrolase family 2, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 2|Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich|Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain|Glycoside hydrolase-type carbohydrate-binding, subgroup|Glycosyl hydrolases family 2, sugar binding domain GO:0003824|GO:0004553|GO:0004565|GO:0005975|GO:0009341|GO:0030246 G3DSA:2.60.120.260|G3DSA:2.60.40.320|G3DSA:2.70.98.10|G3DSA:3.20.20.80|PF00703|PF02836|PF02837|PF02929|PF16353|PR00132|PTHR10066|PTHR10066:SF72|SM01038|SSF49303|SSF49785|SSF51445|SSF74650 PGJ_RS05790 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PTHR22604|PTHR22604:SF2|SSF51735|SSF55347 PGJ_RS05800 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR23026|PTHR23026:SF117|SSF55469 PGJ_RS05805 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008927|IPR016040|IPR018931|IPR028939 6-phosphogluconate dehydrogenase C-terminal domain-like|Domain of unknown function DUF2520|NAD(P)-binding domain|Pyrroline-5-carboxylate reductase, catalytic, N-terminal GO:0055114 G3DSA:1.10.1040.20|G3DSA:3.40.50.720|PF03807|PF10728|PTHR40459|PTHR40459:SF1|SSF48179|SSF51735 PGJ_RS05810 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010023|IPR023214 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase|HAD-like domain GO:0019143 G3DSA:3.40.50.1000|PF08282|PIRSF006118|PTHR21485|PTHR21485:SF3|SSF56784|TIGR01670 PGJ_RS05815 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0005737 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|PTHR11746|PTHR11746:SF80|SSF52972|TIGR00172 PGJ_RS05820 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000271|IPR020939 Ribosomal protein L34|Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00391|PD003101|PF00468|PS00784|PTHR14503|TIGR01030 PGJ_RS05825 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026444 Secretion system C-terminal sorting domain TIGR04183 PGJ_RS05830 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006383|IPR023190|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564|GO:0008152|GO:0016791 G3DSA:1.10.150.210|G3DSA:3.30.70.260|G3DSA:3.40.50.1000|PF12710|PF13740|PTHR10000|PTHR10000:SF7|SSF55021|SSF56784|TIGR00338|TIGR01488 PGJ_RS05835 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011008|IPR013097 Dimeric alpha-beta barrel|Stress responsive alpha-beta barrel G3DSA:3.30.70.900|PF07876|PTHR37832|PTHR37832:SF1|SM00886|SSF54909 PGJ_RS05845 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006674|IPR006675 HD domain|HDIG domain G3DSA:1.10.3210.10|PF01966|SSF109604|TIGR00277 PGJ_RS05850 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021694 Protein of unknown function DUF3276 PF11680 PGJ_RS05855 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021458 Protein of unknown function DUF3109 PF11307 PGJ_RS05860 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|PTHR30535|PTHR30535:SF11|SSF53807 PGJ_RS05865 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, permease protein GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|PTHR30472|PTHR30472:SF32|SSF81345 PGJ_RS05870 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF73|SM00382|SSF52540 PGJ_RS05875 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002808 Adenosylcobinamide amidohydrolase, CbiZ PF01955|PTHR35336|PTHR35336:SF2 PGJ_RS05880 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR010949|IPR011276|IPR012910 TonB-dependent haem/haemoglobin receptor|TonB-dependent haemoglobin/transferrin/lactoferrin receptor|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0005215|GO:0006810|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|SSF56935|TIGR01785|TIGR01786 PGJ_RS05885 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS05890 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS05900 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002142|IPR004634|IPR004635|IPR029045 ClpP/crotonase-like domain|Peptidase S49|Peptidase S49, SppA|Peptidase S49, protease IV GO:0006465|GO:0006508|GO:0008233|GO:0016021 G3DSA:3.90.226.10|PF01343|PIRSF001217|PTHR33209|PTHR33209:SF1|SSF52096|TIGR00705|TIGR00706 PGJ_RS05905 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003758|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 MF_00409|PF02606|PTHR30160|PTHR30160:SF13|SSF52540|TIGR00682 PGJ_RS05910 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006283|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Thiamine-monophosphate kinase GO:0009030|GO:0009228 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_02128|PF00586|PF02769|PIRSF005303|PTHR30270|PTHR30270:SF0|SSF55326|SSF56042|TIGR01379 PGJ_RS05915 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132|TIGR00797 PGJ_RS05920 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004498|IPR029063 Ribosomal protein L11 methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0006479|GO:0008276 G3DSA:3.40.50.150|MF_00735|PF06325|PTHR18895|PTHR18895:SF3|SSF53335 PGJ_RS05925 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002818|IPR006287|IPR029062 Class I glutamine amidotransferase-like|DJ-1|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF4|SSF52317|TIGR01383 PGJ_RS05930 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|SSF74653|TIGR01352 PGJ_RS05935 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558 PGJ_RS05940 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625 PGJ_RS05945 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004569|IPR013785 Aldolase-type TIM barrel|Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0003824|GO:0005737|GO:0008615|GO:0033856 G3DSA:3.20.20.70|MF_00279|PF03740|PTHR30456|PTHR30456:SF0|SSF63892|TIGR00559 PGJ_RS05950 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, all-beta|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0006741|GO:0008152|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|PTHR20275|SSF111331 PGJ_RS05955 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030921 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|LPS export ABC transporter, ATP-binding protein LptB|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0043190|GO:0055085 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF497|SM00382|SSF52540|TIGR04406 PGJ_RS05960 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000504|IPR012677 Nucleotide-binding alpha-beta plait domain|RNA recognition motif domain GO:0000166|GO:0003676 G3DSA:3.30.70.330|PF00076|PTHR24012|SM00360|SSF54928 PGJ_RS05965 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026444 Secretion system C-terminal sorting domain TIGR04183 PGJ_RS05970 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001474|IPR018234|IPR020602 GTP cyclohydrolase I|GTP cyclohydrolase I domain|GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 G3DSA:1.10.286.10|G3DSA:3.30.1130.10|MF_00223|PF01227|PS00859|PS00860|PTHR11109|SSF55620|TIGR00063 PGJ_RS05975 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 PGJ_RS05980 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000652|IPR013785|IPR020861|IPR022896 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096|GO:0008152 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|PTHR21139|SSF51351|TIGR00419 PGJ_RS05985 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032808 DoxX family PF07681 PGJ_RS05990 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011630 Clostridium phage phiCTP1, Gp74 PF07659 PGJ_RS05995 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027065|IPR027417|IPR027543 AAA+ ATPase domain|ATP-dependent protease La (LON), substrate-binding domain|ATPase, AAA-type, core|Lon protease|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163|GO:0043565 G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|PTHR10046|PTHR10046:SF24|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 PGJ_RS06000 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000103|IPR008255|IPR012081|IPR012336|IPR023753 Alkyl hydroperoxide reductase subunit F|FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin-like fold GO:0000302|GO:0008785|GO:0016491|GO:0016651|GO:0050660|GO:0051287|GO:0055114 G3DSA:3.40.30.10|G3DSA:3.50.50.60|PF07992|PF13192|PIRSF000238|PR00368|PR00469|PS00573|PTHR22912|PTHR22912:SF107|SSF51905|SSF52833|TIGR03140 PGJ_RS06005 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000866|IPR012336|IPR017559|IPR019479|IPR024706 Alkyl hydroperoxide reductase subunit C|Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like fold GO:0006979|GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|PTHR10681|PTHR10681:SF121|SSF52833|TIGR03137 PGJ_RS06010 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|SSF52833 PGJ_RS06015 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006298|IPR009000|IPR009022|IPR027417|IPR031157 Elongation factor G, III-V domain|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF14|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394 PGJ_RS06040 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|SSF52833 PGJ_RS06045 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|PF03372|SSF56219 PGJ_RS06050 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 MF_00191|PF02401|PTHR30426|TIGR00216 PGJ_RS06055 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003136|IPR011994|IPR027417 Cytidylate kinase|Cytidylate kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0004127|GO:0005524|GO:0006139 G3DSA:3.40.50.300|MF_00238|PF02224|PTHR21299|SSF52540|TIGR00017 PGJ_RS06065 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000422|IPR000926|IPR016299|IPR017945|IPR032677 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain|GTP cyclohydrolase II|GTP cyclohydrolase II, RibA|Riboflavin biosynthesis protein RibBA GO:0003935|GO:0008686|GO:0009231 G3DSA:3.90.870.10|MF_00179|MF_01283|PF00925|PF00926|PIRSF001259|PTHR21327|PTHR21327:SF6|SSF142695|SSF55821|TIGR00505|TIGR00506 PGJ_RS06070 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005495 Permease LptG/LptF-related GO:0016021 PF03739|PTHR33529|PTHR33529:SF2 PGJ_RS06075 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000244|IPR009027|IPR020069|IPR020070|IPR020594 Ribosomal protein L9|Ribosomal protein L9, C-terminal|Ribosomal protein L9, N-terminal|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|PTHR21368|SSF55653|SSF55658|TIGR00158 PGJ_RS06080 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001648|IPR018275 Ribosomal protein S18|Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|PS00057|PTHR13479|SSF46911|TIGR00165 PGJ_RS06085 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000529|IPR014717|IPR020814 Ribosomal protein S6|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|PTHR21011|SSF54995|TIGR00166 PGJ_RS06090 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR009042|IPR011991|IPR013324|IPR013325|IPR014284|IPR016263 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|RNA polymerase sporulation-specific sigma factor|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006351|GO:0006352|GO:0006355|GO:0016987|GO:0030435 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF00140|PF04539|PF04542|PF04545|PIRSF000770|PR00046|PTHR30603|PTHR30603:SF0|SSF88659|SSF88946|TIGR02937 PGJ_RS06095 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001478|IPR001940|IPR009003|IPR011782|IPR025926 PDZ domain|PDZ-like domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF12812|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF79|SM00228|SSF50156|SSF50494|TIGR02037 PGJ_RS06100 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002150|IPR027493 Ribosomal protein L31|Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00502|PF01197|PR01249|PS01143|PTHR33280|PTHR33280:SF2|SSF143800|TIGR00105 PGJ_RS06105 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, N-terminal|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|PR00096|PTHR11922|PTHR11922:SF2|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 PGJ_RS06110 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|PTHR20881|SSF51621|TIGR00222 PGJ_RS06115 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005115 Uncharacterised domain UPF0126 PF03458|PTHR30506|PTHR30506:SF3 PGJ_RS06120 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003789|IPR019004|IPR023168 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Uncharacterised domain YOR215C, mitochondrial GO:0016884 G3DSA:1.10.10.410|G3DSA:1.10.1510.10|PF09424|PTHR28055|PTHR28055:SF1|SSF89095 PGJ_RS06125 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000158|IPR003008|IPR008280|IPR018316|IPR020805|IPR024757 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Cell division protein FtsZ, conserved site|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain GO:0003924|GO:0005525|GO:0005737 G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PS01135|PTHR30314|PTHR30314:SF3|SM00864|SM00865|SSF52490|SSF55307|TIGR00065 PGJ_RS06130 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003494|IPR020823 Cell division protein FtsA|SHS2 domain inserted in FtsA GO:0005515|GO:0007049 G3DSA:3.30.420.40|MF_02033|PF14450|PIRSF003101|PTHR32432|PTHR32432:SF4|SM00842|SSF53067 PGJ_RS06140 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000713|IPR004101|IPR005758|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramate--L-alanine ligase GO:0005524|GO:0008763|GO:0009058|GO:0009252|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00046|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF5|SSF51984|SSF53244|SSF53623|TIGR01082 PGJ_RS06145 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0009252|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|PTHR21015|PTHR21015:SF22|SSF53756|TIGR01133 PGJ_RS06150 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PF01098|PTHR30474|PTHR30474:SF2 PGJ_RS06155 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004101|IPR005762|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0016874|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|PTHR23135|PTHR23135:SF2|SSF51984|SSF53244|SSF53623|TIGR01087 PGJ_RS06160 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000715|IPR003524|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016020|GO:0016021 MF_00038|PF00953|PF10555|PS01347|PS01348|PTHR22926|PTHR22926:SF5|TIGR00445 PGJ_RS06165 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000713|IPR004101|IPR005761|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0016874|GO:0016881|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF4|SSF53244|SSF53623|SSF63418|TIGR01085 PGJ_RS06170 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001460|IPR005311|IPR005543|IPR012338 Beta-lactamase/transpeptidase-like|PASTA domain|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PF03793|PTHR30627|PTHR30627:SF1|SM00740|SSF54184|SSF56519|SSF56601 PGJ_RS06180 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|PTHR11265|PTHR11265:SF0|SSF53335|SSF81799|TIGR00006 PGJ_RS06190 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000534|IPR005986|IPR012080|IPR012280|IPR016040 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, beta-type|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0004073|GO:0005737|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|PTHR10174|PTHR10174:SF2|SM00859|SSF51735|SSF55347|TIGR01296 PGJ_RS06195 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001322 Lamin Tail Domain PF00932 PGJ_RS06200 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|PTHR30053|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 PGJ_RS06205 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005902|IPR010992 Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|SSF47729|TIGR01201 PGJ_RS06210 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006037|IPR006512 Regulator of K+ conductance, C-terminal|YidE/YbjL duplication GO:0006813|GO:0008324 G3DSA:3.30.70.1450|PF02080|PF06826|PTHR30445|PTHR30445:SF1|SSF116726|TIGR01625 PGJ_RS06215 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PTHR11014|PTHR11014:SF72|SSF53187 PGJ_RS06220 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006680|IPR011059|IPR023512|IPR032466 Amidohydrolase-related|Deaminase MtaD/DadD|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810|GO:0019239 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01281|PF01979|PTHR11271|PTHR11271:SF7|SSF51338|SSF51556 PGJ_RS06225 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000845|IPR001369|IPR011268|IPR011270|IPR018099 Nucleoside phosphorylase domain|PNP/MTAP phosphorylase|Purine nucleoside phosphorylase|Purine nucleoside phosphorylase I, inosine/guanosine-specific|Purine phosphorylase, family 2, conserved site GO:0003824|GO:0004731|GO:0006139|GO:0009116|GO:0016763 G3DSA:3.40.50.1580|PF01048|PIRSF000477|PS01240|PTHR11904|PTHR11904:SF9|SSF53167|TIGR01697|TIGR01700 PGJ_RS06235 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SSF56281 PGJ_RS06245 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005902|IPR010992 Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|SSF47729|TIGR01201 PGJ_RS06250 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009003|IPR018114|IPR026444 Peptidase S1, PA clan|Secretion system C-terminal sorting domain|Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 G3DSA:2.40.10.10|PS00134|SSF50494|TIGR04183 PGJ_RS06255 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002869|IPR002880|IPR009014|IPR011766|IPR011895|IPR017900|IPR019456|IPR019752|IPR029061|IPR033412 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate-flavodoxin oxidoreductase|Pyruvate-flavodoxin oxidoreductase, EKR domain|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0005506|GO:0008152|GO:0016491|GO:0016903|GO:0022900|GO:0030976|GO:0055114 G3DSA:3.30.70.20|G3DSA:3.40.50.920|G3DSA:3.40.50.970|G3DSA:3.40.920.10|G3DSA:4.10.780.10|PF01558|PF01855|PF02775|PF10371|PF13484|PF17147|PIRSF000159|PS00198|PTHR32154|PTHR32154:SF0|SM00890|SSF52518|SSF52922|SSF53323|SSF54862|TIGR02176 PGJ_RS06260 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011991|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.40.50.300|PF13173|PTHR33295|PTHR33295:SF1|SSF46785|SSF52540 PGJ_RS06265 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|PTHR34585|SSF46955 PGJ_RS06270 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|SSF47729 PGJ_RS06275 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000640 Translation elongation factor EFG, V domain G3DSA:3.30.70.240 PGJ_RS06285 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF26|SSF56349 PGJ_RS06290 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011322 Nitrogen regulatory PII-like, alpha/beta SSF54913 PGJ_RS06295 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866 PGJ_RS06300 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|SSF111369|TIGR01730 PGJ_RS06305 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30026|SSF56954 PGJ_RS06310 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001160|IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20C, Xaa-His dipeptidase GO:0006508|GO:0008152|GO:0016787 G3DSA:3.40.630.10|PF01546|PF07687|PIRSF016599|PR00934|PTHR11014|PTHR11014:SF54|SSF53187|SSF55031|TIGR01893 PGJ_RS06320 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|SM00935|SSF111384 PGJ_RS06325 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR008969|IPR012910|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.60.40.1120|PF00593|PF07715|PF13715|PTHR30069|SSF49464|SSF56935 PGJ_RS06355 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007391 Vancomycin resistance VanW PF04294|PTHR35788|PTHR35788:SF2 PGJ_RS06360 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003010|IPR003694|IPR014445|IPR014729|IPR022310 Carbon-nitrogen hydrolase|Glutamine-dependent NAD(+) synthetase|NAD(+) synthetase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0006807|GO:0009435|GO:0016810 G3DSA:3.40.50.620|G3DSA:3.60.110.10|PF00795|PF02540|PIRSF006630|PTHR23090|PTHR23090:SF9|SSF52402|SSF56317|TIGR00552 PGJ_RS06365 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Methylglyoxal synthase-like domain|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|PF02142|PF02786|PF02787|PR00098|PS00866|PS00867|PTHR11405|PTHR11405:SF5|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 PGJ_RS06370 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002474|IPR006274|IPR017926|IPR029062 Carbamoyl-phosphate synthase, small subunit|Carbamoyl-phosphate synthase, small subunit N-terminal domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00097|PR00099|PTHR11405|SM01097|SSF52021|SSF52317|TIGR01368 PGJ_RS06375 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029055|IPR029057 Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase-like G3DSA:3.40.50.2020|G3DSA:3.60.20.10|PTHR11907|PTHR11907:SF0|SSF53271|SSF56235 PGJ_RS06380 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001708|IPR019998|IPR028053|IPR028055 Membrane insertase OXA1/ALB3/YidC|Membrane insertase YidC|Membrane insertase YidC, N-terminal|Membrane insertase YidC/Oxa1, C-terminal GO:0016021|GO:0051205 MF_01810|PF02096|PF14849|PR00701|PTHR12428|PTHR12428:SF14|TIGR03592|TIGR03593 PGJ_RS06385 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|PTHR11550|SSF52317|SSF52540|TIGR00337 PGJ_RS06390 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000644|IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|CBS domain|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00478|PF00571|PIRSF000130|PS00487|PTHR11911|PTHR11911:SF85|SM01240|SSF51412|SSF54631 PGJ_RS06395 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|PTHR11088|SSF52540|TIGR00174 PGJ_RS06400 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|PTHR10772|SM00883|SSF50129 PGJ_RS06405 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|PTHR11353|SSF48592|SSF52029|SSF54849|TIGR02348 PGJ_RS06415 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003675 CAAX amino terminal protease GO:0016020 PF02517|PTHR10794|PTHR10794:SF37 PGJ_RS06420 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase PF12705|SSF52540 PGJ_RS06425 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025178 Domain of unknown function DUF4105 PF13387 PGJ_RS06430 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002591|IPR017849|IPR017850|IPR026263 Alkaline phosphatase, prokaryotic|Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824|GO:0008152 G3DSA:3.40.720.10|PF01663|PIRSF031924|SSF53649 PGJ_RS06435 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR020937|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|PTHR30612|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963 PGJ_RS06440 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005229|IPR013527|IPR013551 Conserved hypothetical protein CHP00255|Domain of unknown function DUF1732|YicC-like, N-terminal PF03755|PF08340|PTHR30636|TIGR00255 PGJ_RS06445 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008145|IPR017665|IPR020590|IPR027417 Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0004385|GO:0006163 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00625|PS00856|PTHR23117|SM00072|SSF52540|TIGR03263 PGJ_RS06450 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011415|IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain|Predicted bifunctional spore maturation protein, fused SpmA/SpmB PF07670|PIRSF036542|PTHR35793|PTHR35793:SF2 PGJ_RS06455 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002036|IPR023091 Endoribonuclease YbeY|Metalloprotease catalytic domain, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|MF_00009|PF02130|SSF55486|TIGR00043 PGJ_RS06460 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PF01040|PTHR11048|PTHR11048:SF5 PGJ_RS06465 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006383|IPR006385|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial GO:0008152|GO:0016791 G3DSA:3.40.50.1000|PF12710|PTHR10000|PTHR10000:SF10|SSF56784|TIGR01488|TIGR01490 PGJ_RS06475 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001769|IPR005536|IPR012600|IPR013783|IPR014756|IPR026444|IPR029030|IPR029031 Caspase-like domain|Gingipain|Gingipain propeptide|Gingipain, N-terminal|Immunoglobulin E-set|Immunoglobulin-like fold|Peptidase C25, Ig-like domain|Secretion system C-terminal sorting domain GO:0004197|GO:0006508|GO:0008233|GO:0008234 G3DSA:2.60.40.10|G3DSA:3.40.50.10390|G3DSA:3.40.50.1460|PF01364|PF03785|PF08126|SSF52129|SSF81296|TIGR04183 PGJ_RS06480 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003698|IPR006638|IPR007197|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Lipoyl synthase|Radical SAM GO:0003824|GO:0009107|GO:0016992|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_00206|PF04055|PIRSF005963|PTHR10949|SM00729|SSF102114|TIGR00510 PGJ_RS06485 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001375|IPR002469|IPR029058 Alpha/Beta hydrolase fold|Dipeptidylpeptidase IV, N-terminal domain|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 G3DSA:2.140.10.30|G3DSA:3.40.50.1820|PF00326|PF00930|PTHR11731|PTHR11731:SF110|SSF53474|SSF82171 PGJ_RS06490 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|PTHR30308|PTHR30308:SF2|SSF74982|TIGR00086 PGJ_RS06495 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005495 Permease LptG/LptF-related GO:0016021 PF03739|PTHR33529|PTHR33529:SF1 PGJ_RS06500 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002616|IPR004803 Queuine tRNA-ribosyltransferase|tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008033|GO:0008479|GO:0008616 G3DSA:3.20.20.105|MF_00168|PF01702|PTHR21148|PTHR21148:SF26|SSF51713|TIGR00430|TIGR00449 PGJ_RS06505 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR011010|IPR013762|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PF13102|PTHR30349|PTHR30349:SF26|SSF56349 PGJ_RS06510 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR011010|IPR013762|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PF13102|PTHR30349|PTHR30349:SF26|SSF56349 PGJ_RS06520 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005901 GLPGLI family protein PF09697|TIGR01200 PGJ_RS06525 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008969|IPR012910|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.60.40.1120|PF13620|PTHR11532|PTHR11532:SF57|SSF49464|SSF56935 PGJ_RS06530 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|PTHR34585|SSF46955 PGJ_RS06535 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|PTHR34585|SSF46955 PGJ_RS06545 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007936 Virulence-associated E PF05272|PTHR34985 PGJ_RS06550 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|PF13155|SSF57783 PGJ_RS06555 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001668 Plasmid recombination enzyme GO:0003677|GO:0005727|GO:0006310 PF01076 PGJ_RS06560 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012424 Conjugative transposon, TraJ, C-terminal PF07863 PGJ_RS06565 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003815|IPR011249 Metalloenzyme, LuxS/M16 peptidase-like|S-ribosylhomocysteinase (LuxS) GO:0003824|GO:0005506|GO:0009372|GO:0043768|GO:0046872 G3DSA:3.30.1360.80|MF_00091|PD013172|PF02664|PIRSF006160|PR01487|PTHR35799|SSF63411 PGJ_RS06570 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000845|IPR010049|IPR018017 MTA/SAH nucleosidase|Nucleoside phosphorylase|Nucleoside phosphorylase domain GO:0003824|GO:0008782|GO:0008930|GO:0009116|GO:0009164|GO:0019509 G3DSA:3.40.50.1580|PF01048|PTHR21234|SSF53167|TIGR01704 PGJ_RS06575 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026444 Secretion system C-terminal sorting domain TIGR04183 PGJ_RS06580 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009003|IPR019500 Peptidase S1, PA clan|Peptidase S46 GO:0008239|GO:0070009 G3DSA:2.40.10.10|PF10459|PTHR38469|PTHR38469:SF1|SSF50494 PGJ_RS06585 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005240 Protein of unknown function DUF389 PF04087|PTHR20992|PTHR20992:SF9 PGJ_RS06590 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002797 Polysaccharide biosynthesis protein GO:0016020 PF01943 PGJ_RS06595 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003593|IPR004605|IPR008823|IPR008824|IPR011991|IPR027417 AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|PTHR13779|PTHR13779:SF25|SM00382|SSF46785|SSF52540|TIGR00635 PGJ_RS06600 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001497|IPR008332|IPR011991|IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|PF01035|PS00374|PTHR10815|PTHR10815:SF5|SSF46767|SSF53155|TIGR00589 PGJ_RS06605 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003849 Preprotein translocase YajC PF02699|PR01853|PTHR33909|PTHR33909:SF1|SM01323|TIGR00739 PGJ_RS06610 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012505 YbbR-like PF07949 PGJ_RS06615 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001977|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004140|GO:0005524|GO:0015937 G3DSA:3.40.50.300|MF_00376|PF01121|PTHR10695|SSF52540|TIGR00152 PGJ_RS06625 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004839|IPR011282|IPR015421|IPR015422|IPR015424 2-amino-3-ketobutyrate coenzyme A ligase|Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006567|GO:0008890|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00985|PF00155|PTHR13693|PTHR13693:SF60|SSF53383|TIGR01822 PGJ_RS06630 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000878|IPR012382|IPR014777 Precorrin-2 C(20)-methyltransferase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168|GO:0008757|GO:0009236|GO:0030788 G3DSA:3.40.1010.10|PF00590|PIRSF036427|PTHR21091|PTHR21091:SF118|SSF53790 PGJ_RS06640 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003721|IPR014729 Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0004592|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|PTHR21299|PTHR21299:SF1|SSF52374|TIGR00018 PGJ_RS06645 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003790|IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycosyl hydrolase-like 10 GO:0005975 G3DSA:3.20.20.80|PF02638|PTHR30032|PTHR30032:SF2|SSF51445 PGJ_RS06650 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004559|IPR006638|IPR007197|IPR010723|IPR023404 Coproporphyrinogen III oxidase, oxygen-independent related|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|PF06969|PTHR13932|PTHR13932:SF5|SM00729|SSF102114|TIGR00539 PGJ_RS06655 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001597|IPR015421|IPR015422|IPR015424 Aromatic amino acid beta-eliminating lyase/threonine aldolase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016829 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PTHR10289|PTHR10289:SF8|SSF53383 PGJ_RS06660 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025668 Transposase DDE domain PF13612 PGJ_RS06665 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025342 Protein of unknown function DUF4248 PF14053 PGJ_RS06670 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004453|IPR009051|IPR013542|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Domain of unknown function DUF1730|Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491|GO:0051536 G3DSA:3.30.70.20|PF08331|PF13484|PS00198|PTHR30002|PTHR30002:SF4|SSF46548|TIGR00276 PGJ_RS06685 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001250|IPR011051|IPR014628|IPR014710 Mannose-6-phosphate isomerase, Firmicutes type, short form|Mannose-6-phosphate isomerase, type I|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0004476|GO:0005975|GO:0008270 G3DSA:2.60.120.10|PF01238|PIRSF036894|PTHR18964|PTHR18964:SF114|SSF51182 PGJ_RS06690 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021729|IPR025303 Domain of unknown function DUF3298|Domain of unknown function DUF4163 G3DSA:3.30.565.40|G3DSA:3.90.640.20|PF11738 PGJ_RS06695 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|PTHR33202|SSF46785 PGJ_RS06700 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:1.10.300.10|G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|PTHR11846|SM00788|SSF52540|TIGR00184 PGJ_RS06705 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001645|IPR004101|IPR013221|IPR018109 Folylpolyglutamate synthetase|Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF08245|PIRSF001563|PS01012|PTHR11136|PTHR11136:SF0|SSF53244|SSF53623|TIGR01499 PGJ_RS06710 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23512|SSF103473 PGJ_RS06715 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR031709 Putative phage abortive infection protein PF16872 PGJ_RS06725 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025105 Domain of unknown function DUF4010 PF13194|PTHR39084 PGJ_RS06730 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR027304 Trigger factor/SurA domain G3DSA:3.10.50.40|PF13616|PF13623|SSF109998|SSF54534 PGJ_RS06735 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000644|IPR002550|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Domain of unknown function DUF21|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|PTHR22777|SM01091|SSF54631|SSF56176 PGJ_RS06740 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010664|IPR026265 Lipopolysaccharide assembly, LptC-related|Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PF06835|TIGR04409 PGJ_RS06745 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|SM00028|SSF48452 PGJ_RS06750 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic G3DSA:2.40.160.60|SSF56935 PGJ_RS06755 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004619 Type III pantothenate kinase GO:0004594 G3DSA:3.30.420.40|MF_01274|PF03309|PTHR34265|SSF53067|TIGR00671 PGJ_RS06760 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|PTHR10953|SSF69572 PGJ_RS06765 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001261|IPR002933|IPR010161|IPR011650 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006508|GO:0006518|GO:0008152|GO:0008237|GO:0008270|GO:0016787|GO:0045148 G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_00550|PF01546|PF07687|PIRSF037215|PS00758|PS00759|PTHR11014|PTHR11014:SF3|SSF53187|SSF55031|TIGR01882 PGJ_RS06770 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004813|IPR004814 Oligopeptide transporter OPT|Oligopeptide transporter, OPT superfamily GO:0055085 PF03169|PTHR31645|PTHR31645:SF0|TIGR00733 PGJ_RS06780 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR008969|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF13715|SSF49464|SSF56935 PGJ_RS06785 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005901 GLPGLI family protein PF09697|TIGR01200 PGJ_RS06790 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531|PTHR33619 PGJ_RS06795 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003856|IPR005702|IPR025669|IPR027417|IPR032807 AAA domain|Exopolysaccharide synthesis protein|Lipopolysaccharide biosynthesis|P-loop containing nucleoside triphosphate hydrolase|Tyrosine kinase, G-rich domain GO:0009103|GO:0016020|GO:0045226 G3DSA:3.40.50.300|PF02706|PF13614|PF13807|PTHR32309|PTHR32309:SF13|SSF52540|TIGR01007 PGJ_RS06800 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016195|IPR016667 Capsular polysaccharide synthesis, CpsB/CapC|Polymerase/histidinol phosphatase-like GO:0003824|GO:0004725|GO:0030145 PIRSF016557|PTHR39181|PTHR39181:SF1|SSF89550 PGJ_RS06805 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR015797 NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10 PGJ_RS06810 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000878|IPR008189|IPR014776 Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|PF00590|PIRSF005917|PTHR21091|PTHR21091:SF118|SSF53790 PGJ_RS06815 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001678|IPR023267|IPR027391|IPR029063|IPR031341 RNA (C5-cytosine) methyltransferase|Ribosomal RNA small subunit methyltransferase F, N-terminal|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type|rRNA small subunit methyltransferase F, RNA-binding PUA-like domain GO:0008168 G3DSA:3.40.50.150|PF01189|PF13636|PF17125|PR02008|PTHR22807|PTHR22807:SF36|SSF53335 PGJ_RS06820 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PTHR18968|PTHR18968:SF89|SSF52518 PGJ_RS06825 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002869|IPR002880|IPR009014|IPR019752|IPR022367|IPR029061 2-oxoacid:acceptor oxidoreductase, alpha subunit|Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0016903|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|G3DSA:3.40.920.10|PF01558|PF01855|PTHR32154|PTHR32154:SF14|SSF52518|SSF52922|SSF53323|TIGR03710 PGJ_RS06835 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS06840 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS06845 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 G3DSA:3.40.1050.10|PF00484|PTHR11002|PTHR11002:SF22|SM00947|SSF53056 PGJ_RS06850 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011044|IPR015943 Quinoprotein amine dehydrogenase, beta chain-like|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF50969 PGJ_RS06855 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011044|IPR015943 Quinoprotein amine dehydrogenase, beta chain-like|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF15869|SSF50969 PGJ_RS06860 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011044|IPR015943 Quinoprotein amine dehydrogenase, beta chain-like|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF50969 PGJ_RS06865 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|SSF111369|TIGR01730 PGJ_RS06870 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866 PGJ_RS06875 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF7|SSF56954 PGJ_RS06880 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866 PGJ_RS06885 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000801|IPR029058 Alpha/Beta hydrolase fold|Putative esterase G3DSA:3.40.50.1820|PF00756|PTHR10907|PTHR10907:SF33|SSF53474 PGJ_RS06890 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family G3DSA:2.30.30.330|PF05708|SSF54001 PGJ_RS06905 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026444|IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like|Secretion system C-terminal sorting domain G3DSA:3.80.10.10|PF13306|PTHR11017|SSF52058|TIGR04183 PGJ_RS06910 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021255 Putative auto-transporter adhesin, head GIN domain PF10988|PTHR39200|PTHR39200:SF1 PGJ_RS06915 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021255 Putative auto-transporter adhesin, head GIN domain PF10988|PTHR39200|PTHR39200:SF1 PGJ_RS06920 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001907|IPR023562|IPR029045|IPR033135 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, histidine active site|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00382|PTHR10381|PTHR10381:SF22|SSF52096 PGJ_RS06925 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003593|IPR003959|IPR004487|IPR010603|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type GO:0005524|GO:0006457|GO:0008270|GO:0046983|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|PTHR11262|PTHR11262:SF4|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382 PGJ_RS06930 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001650|IPR002121|IPR004589|IPR006293|IPR010997|IPR011545|IPR011991|IPR014001|IPR018982|IPR027417|IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain|DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|DNA helicase, ATP-dependent, RecQ type, bacterial|HRDC domain|HRDC-like|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RQC domain|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003676|GO:0003824|GO:0004003|GO:0005524|GO:0005622|GO:0006260|GO:0006281|GO:0006310|GO:0008026|GO:0009432|GO:0043140|GO:0044237 G3DSA:1.10.10.10|G3DSA:1.10.150.80|G3DSA:3.40.50.300|PF00270|PF00271|PF00570|PF09382|PF16124|PTHR13710|PTHR13710:SF81|SM00341|SM00487|SM00490|SM00956|SSF46785|SSF47819|SSF52540|TIGR00614|TIGR01389 PGJ_RS06935 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000297|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Trigger factor/SurA domain GO:0016853 G3DSA:3.10.50.40|PF00639|PTHR10657|PTHR10657:SF11|SSF109998|SSF54534 PGJ_RS06940 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005653 Organic solvent tolerance-like, N-terminal G3DSA:2.60.450.10|PF13100 PGJ_RS06950 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002099|IPR003594|IPR013507|IPR014721|IPR014762|IPR014790|IPR020568|IPR020667 DNA mismatch repair protein family|DNA mismatch repair protein, C-terminal|DNA mismatch repair protein, MutL|DNA mismatch repair, conserved site|Histidine kinase-like ATPase, C-terminal domain|MutL, C-terminal, dimerisation|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0006298|GO:0030983 G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00149|PF01119|PF08676|PF13589|PS00058|PTHR10073|SM00853|SM01340|SSF118116|SSF54211|SSF55874|TIGR00585 PGJ_RS06955 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011628|IPR026444 Cleaved adhesin|Secretion system C-terminal sorting domain PF07675|TIGR04183 PGJ_RS06980 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007838 Cell division protein ZapA-like PF05164|SSF102829 PGJ_RS06985 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003607|IPR004087|IPR004088|IPR006674|IPR006675|IPR017705|IPR022711 HD domain|HD/PDEase domain|HDIG domain|K Homology domain|K Homology domain, type 1|Ribonuclease Y|Ribonuclease Y, N-terminal GO:0003676|GO:0003723|GO:0006402|GO:0016020 G3DSA:1.10.3210.10|G3DSA:3.30.1370.10|MF_00335|PF00013|PF01966|PF12072|PTHR12826|SM00322|SM00471|SSF109604|SSF54791|TIGR00277|TIGR03319 PGJ_RS06990 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007557 PSP1, C-terminal PF04468|PTHR21600|PTHR21600:SF3 PGJ_RS06995 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR020018 Gliding motility-associated lipoprotein, GldH PF14109|TIGR03511 PGJ_RS07000 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001238|IPR018078|IPR027417 DNA-binding, RecF|DNA-binding, RecF, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003697|GO:0005524|GO:0006281 G3DSA:3.40.50.300|MF_00365|PF13175|PS00617|PS00618|PTHR32182|PTHR32182:SF0|SSF52540|TIGR00611 PGJ_RS07005 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007922 Protein of unknown function DUF721/UPF0232 PF05258 PGJ_RS07010 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|SM00100|SM00419|SSF46785|SSF51206 PGJ_RS07015 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.40.20|G3DSA:2.40.50.100|MF_01322|PF00623|PF04983|PF04997|PF04998|PF05000|PTHR19376|PTHR19376:SF32|SM00663|SSF64484|TIGR02386 PGJ_RS07020 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR015712|IPR019462 DNA-directed RNA polymerase, beta subunit|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2|DNA-directed RNA polymerase, subunit 2, domain 6|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351|GO:0032549 G3DSA:2.30.150.10|G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|PTHR20856|PTHR20856:SF20|SSF64484|TIGR02013 PGJ_RS07025 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000206|IPR008932|IPR013823|IPR014719 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|SSF48300|SSF54736|TIGR00855 PGJ_RS07030 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 PF00466|PTHR11560|SSF160369 PGJ_RS07035 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002143|IPR005878|IPR016094|IPR016095|IPR023673|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, 2-layer alpha/beta-sandwich|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|PTHR23105|PTHR23105:SF5|SSF56808|TIGR01169 PGJ_RS07040 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000911|IPR006519|IPR020783|IPR020784|IPR020785 Ribosomal protein L11, C-terminal|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11, conserved site|Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|PS00359|PTHR11661|PTHR11661:SF7|SM00649|SSF46906|SSF54747|TIGR01632 PGJ_RS07045 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001062|IPR005824|IPR006645|IPR008991|IPR014722 KOW|NusG, N-terminal|Ribosomal protein L2 domain 2|Transcription antitermination protein, NusG|Translation protein SH3-like domain GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF00467|PF02357|PR00338|PTHR30265|SM00738|SM00739|SSF50104|SSF82679|TIGR00922 PGJ_RS07050 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001901|IPR005807|IPR022943 Preprotein translocase subunit SecE|Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|TIGR00964 PGJ_RS07060 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF112|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 PGJ_RS07075 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR003489|IPR004107|IPR011010|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Ribosomal protein S30Ae/sigma 54 modulation protein|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0015074|GO:0044238 G3DSA:1.10.150.130|G3DSA:1.10.443.10|G3DSA:3.30.160.100|MF_01808|PF00589|PF02482|PF02899|PTHR30349|PTHR30349:SF5|SSF56349|SSF69754|TIGR00741 PGJ_RS07080 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001911|IPR018278 Ribosomal protein S21|Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00358|PD005521|PF01165|PR00976|PS01181|PTHR21109|TIGR00030 PGJ_RS07085 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000432|IPR002625|IPR005747|IPR007696|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, core|Endonuclease MutS2|P-loop containing nucleoside triphosphate hydrolase|Smr domain GO:0004519|GO:0005524|GO:0006298|GO:0016887|GO:0030983|GO:0045910 G3DSA:3.40.50.300|MF_00092|PF00488|PF01713|PIRSF005814|PTHR11361|PTHR11361:SF14|SM00463|SM00533|SM00534|SSF160443|SSF48334|SSF52540 PGJ_RS07090 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001478|IPR004387|IPR008915 PDZ domain|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0005515|GO:0006508|GO:0016021 G3DSA:2.30.42.10|PF02163|PF13180|PTHR22939|PTHR22939:SF78|SM00228|SSF50156|TIGR00054 PGJ_RS07095 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006037|IPR006153|IPR030151 Cation/H+ exchanger|K(+)/H(+) antiporter NhaP|Regulator of K+ conductance, C-terminal GO:0005451|GO:0006812|GO:0006813|GO:0008324|GO:0015299|GO:0016021|GO:0055085 PF00999|PTHR32507|PTHR32507:SF7|SSF116726 PGJ_RS07100 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432|GO:0016787 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|PTHR24029|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 PGJ_RS07105 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001816|IPR009060|IPR014039|IPR018101 Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.286.20|G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01126|PS01127|PTHR11741|SSF46934|SSF54713|TIGR00116 PGJ_RS07110 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:1.10.287.610|G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|PS00963|PTHR12534|SSF52313|TIGR01011 PGJ_RS07115 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|PTHR21569|SSF54211 PGJ_RS07120 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005822|IPR005823|IPR023563|IPR023564 Ribosomal protein L13|Ribosomal protein L13 domain|Ribosomal protein L13, bacterial-type|Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|PS00783|PTHR11545|SSF52161|TIGR01066 PGJ_RS07130 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001980|IPR004821|IPR014729 Coenzyme A biosynthesis protein|Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PF01467|PR01020|PTHR21342|PTHR21342:SF1|SSF52374|TIGR00125|TIGR01510 PGJ_RS07135 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001241|IPR002288|IPR003594|IPR006171|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|PF00204|PF00986|PF01751|PF02518|PR00418|PS00177|PTHR10169|PTHR10169:SF28|SM00387|SM00433|SSF54211|SSF55874|SSF56719 PGJ_RS07140 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032025 Protein of unknown function DUF5063 PF16702 PGJ_RS07145 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002562|IPR012337 3'-5' exonuclease domain|Ribonuclease H-like domain GO:0003676|GO:0006139|GO:0008408 G3DSA:3.30.420.10|PF01612|PTHR13620|SM00474|SSF53098 PGJ_RS07150 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002478|IPR015947|IPR019614|IPR029063 PUA domain|PUA-like domain|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosylmethionine-dependent methyltransferase GO:0003723|GO:0008168 G3DSA:2.30.130.10|G3DSA:3.30.750.80|G3DSA:3.40.50.150|PF10672|PTHR11061|PTHR11061:SF12|SM00359|SSF53335|SSF88697 PGJ_RS07155 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|PTHR21666|PTHR21666:SF181|SM00062|SSF53850 PGJ_RS07160 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025631 Putative porin-10 PF14121 PGJ_RS07165 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007621 TPM domain PF04536|PTHR30373|PTHR30373:SF2 PGJ_RS07170 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007156|IPR023353 LemA|LemA-like domain G3DSA:1.20.1440.20|PF04011|PTHR34478|PTHR34478:SF2|SSF140478 PGJ_RS07175 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|PTHR30466|PTHR30466:SF6|SM00903|SSF50475 PGJ_RS07180 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002801|IPR020542|IPR020545 Aspartate carbamoyltransferase regulatory subunit, C-terminal|Aspartate carbamoyltransferase regulatory subunit, N-terminal|Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 G3DSA:2.30.30.20|G3DSA:3.30.70.140|MF_00002|PD006194|PF01948|PF02748|PTHR35805|PTHR35805:SF1|SSF54893|SSF57825|TIGR00240 PGJ_RS07185 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002082|IPR006130|IPR006131|IPR006132 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|PTHR11405|PTHR11405:SF16|SSF53671|TIGR00670 PGJ_RS07190 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007497|IPR016907 Protein of unknown function DUF541|Uncharacterised conserved protein UCP029033, periplasmic protein PF04402|PIRSF029033|PTHR34387|PTHR34387:SF1 PGJ_RS07195 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic SSF56935 PGJ_RS07200 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011040|IPR026856 Sialidase family|Sialidases GO:0004308 G3DSA:2.120.10.10|PF13088|PTHR10628|PTHR10628:SF5|SSF50939 PGJ_RS07205 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032675 Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PTHR24365|SSF52058 PGJ_RS07210 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|SSF56784|TIGR01509 PGJ_RS07215 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001650|IPR004609|IPR011545|IPR012340|IPR014001|IPR027417|IPR033454 ATP-dependent DNA helicase RecG|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|RecG, wedge domain GO:0003676|GO:0004003|GO:0005524|GO:0006281|GO:0006310 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00270|PF00271|PF17191|PTHR24031|PTHR24031:SF249|SM00487|SM00490|SSF50249|SSF52540|TIGR00643 PGJ_RS07220 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001509|IPR005886|IPR008089|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Nucleotide sugar epimerase|UDP-glucose 4-epimerase GalE GO:0003824|GO:0003978|GO:0005975|GO:0006012|GO:0016857|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PR01713|PTHR10366|PTHR10366:SF39|SSF51735|TIGR01179 PGJ_RS07225 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006073|IPR019987|IPR027417 GTP binding domain|GTP-binding protein, ribosome biogenesis, YsxC|P-loop containing nucleoside triphosphate hydrolase GO:0000917|GO:0005525 G3DSA:3.40.50.300|MF_00321|PF01926|PTHR11649|SSF52540|TIGR03598 PGJ_RS07235 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004843|IPR008963|IPR015914|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Purple acid phosphatase, N-terminal|Purple acid phosphatase-like, N-terminal GO:0003993|GO:0016787|GO:0046872 G3DSA:2.60.40.380|G3DSA:3.60.21.10|PF00149|PF16656|PTHR22953|PTHR22953:SF0|SSF49363|SSF56300 PGJ_RS07240 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000277|IPR006237|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|L-methionine gamma-lyase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0018826|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|PTHR11808:SF14|SSF53383|TIGR01328 PGJ_RS07255 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012912|IPR024047 Plasmid pRiA4b, Orf3|Protein MM3350-like domain G3DSA:3.10.290.30|PF07929|SSF159941 PGJ_RS07260 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|PTHR11088|SSF52540|TIGR00174 PGJ_RS07265 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic PF13231|PTHR33908 PGJ_RS07270 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF86|SSF53448 PGJ_RS07275 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|PTHR22911:SF37|SSF103481 PGJ_RS07280 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000194|IPR003593|IPR004665|IPR011112|IPR011113|IPR011129|IPR012340|IPR017956|IPR027417 AAA+ ATPase domain|AT hook, DNA-binding motif|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock protein|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, N-terminal|Rho termination factor, RNA-binding|Transcription termination factor Rho GO:0003676|GO:0003677|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF02178|PF07497|PF07498|PTHR15184|PTHR15184:SF34|SM00357|SM00382|SM00384|SM00959|SSF50249|SSF52540|SSF68912|TIGR00767 PGJ_RS07285 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000119|IPR005902|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|PF00216|SSF47729|TIGR01201 PGJ_RS07295 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004227|IPR012886|IPR013802|IPR022384 Formiminotransferase catalytic domain|Formiminotransferase subdomain|Formiminotransferase, C-terminal subdomain|Formiminotransferase, N-terminal subdomain GO:0005542|GO:0008152|GO:0016740 G3DSA:3.30.70.670|G3DSA:3.30.990.10|PF02971|PF07837|PTHR12234|PTHR12234:SF0|SM01221|SM01222|SSF55116|TIGR02024 PGJ_RS07300 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005920|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Imidazolonepropionase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0005737|GO:0016787|GO:0016810|GO:0016812|GO:0019556 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_00372|PF01979|PTHR22642|PTHR22642:SF1|SSF51338|SSF51556|TIGR01224 PGJ_RS07305 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR020846 Major facilitator superfamily domain SSF103473 PGJ_RS07310 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010870 Phosphate-selective porin O/P PF07396 PGJ_RS07315 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 PF04961|PTHR12234|SSF101262 PGJ_RS07320 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001106|IPR005921|IPR008948|IPR022313|IPR024083 Aromatic amino acid lyase|Fumarase/histidase, N-terminal|Histidine ammonia-lyase|L-Aspartase-like|Phenylalanine/histidine ammonia-lyases, active site GO:0003824|GO:0004397|GO:0005737|GO:0006548|GO:0016841 G3DSA:1.10.275.10|G3DSA:1.20.200.10|PF00221|PS00488|PTHR10362|PTHR10362:SF7|SSF48557|TIGR01225 PGJ_RS07325 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|PTHR37694|SSF51182 PGJ_RS07330 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PTHR11958|PTHR11958:SF53|SSF118215 PGJ_RS07335 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005129|IPR027417 P-loop containing nucleoside triphosphate hydrolase|SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 G3DSA:1.20.5.170|G3DSA:3.40.50.300|PF03308|PTHR23408|PTHR23408:SF17|SSF52540|TIGR00750 PGJ_RS07340 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008962|IPR011467 PapD-like|Protein of unknown function DUF1573 G3DSA:2.60.40.360|PF07610|PTHR37833|PTHR37833:SF1 PGJ_RS07345 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008962|IPR011467 PapD-like|Protein of unknown function DUF1573 G3DSA:2.60.40.360|PF07610|PTHR37833|PTHR37833:SF1 PGJ_RS07350 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR014825|IPR016024 Armadillo-type fold|DNA alkylation repair enzyme GO:0005488 PF03571|PF08713|PTHR23422|PTHR23422:SF12|SSF48371 PGJ_RS07355 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal|tRNA-binding arm GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|PF00587|PF02403|PIRSF001529|PR00981|PTHR11778|SSF46589|SSF55681|TIGR00414 PGJ_RS07360 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001684|IPR018261 Ribosomal protein L27|Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|PS00831|PTHR15893|SSF110324|TIGR00062 PGJ_RS07365 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001787|IPR028909 Ribosomal protein L21|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|PTHR21349|SSF141091|TIGR00061 PGJ_RS07375 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025250 Protein of unknown function DUF4199 PF13858 PGJ_RS07380 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF100|SSF53448 PGJ_RS07385 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR23026|SSF55469 PGJ_RS07390 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003374|IPR024932 ApbE-like domain|Flavin transferase ApbE GO:0017013 PF02424|PIRSF006268|PTHR30040|PTHR30040:SF3|SSF143631 PGJ_RS07395 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003667|IPR011293 Electron transport complex, subunit RnfA/RsxA|Rnf-Nqr subunit, membrane protein GO:0016020|GO:0022900 MF_00459|PF02508|PIRSF006102|PTHR30335|PTHR30335:SF0|TIGR01943 PGJ_RS07400 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003667|IPR010968 Electron transport complex, RsxE|Rnf-Nqr subunit, membrane protein GO:0016020|GO:0022900 MF_00478|PF02508|PIRSF006102|PTHR30586|TIGR01948 PGJ_RS07405 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007329|IPR010209 Electron transport complex, subunit RnfG/RsxG|FMN-binding GO:0005886|GO:0009055|GO:0010181|GO:0016020|GO:0022900 MF_00479|PF04205|PIRSF006091|PTHR36118|PTHR36118:SF1|SM00900|TIGR01947 PGJ_RS07410 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004338|IPR011303 Electron transport complex, subunit RnfD/RsxD|NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020|GO:0016021|GO:0022900 MF_00462|PF03116|PTHR30578|PTHR30578:SF0|TIGR01946 PGJ_RS07415 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009051|IPR010208|IPR011538|IPR017896|IPR017900|IPR019554|IPR026902 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Electron transport complex, subunit RnfC/RsxC|NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|RnfC Barrel sandwich hybrid domain|Soluble ligand binding domain GO:0009055|GO:0016020|GO:0051536|GO:0051539 G3DSA:1.10.1060.10|MF_00461|PF01512|PF10531|PF13237|PF13375|PS00198|PTHR11780|PTHR11780:SF1|SSF142019|SSF46548|TIGR01945 PGJ_RS07420 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007202|IPR017896|IPR017900 4Fe-4S domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain GO:0051536 G3DSA:3.30.70.20|PF00037|PF04060|PF12838|PS00198|SSF54862 PGJ_RS07425 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007359 Positive regulator of sigma(E), RseC/MucC PF04246 PGJ_RS07430 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13432|PF14559|PTHR23083|SM00028|SSF48452 PGJ_RS07440 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010073|IPR010918|IPR016188|IPR029062 AIR synthase-related protein, C-terminal domain|Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase|PurM-like, N-terminal domain GO:0004642|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.40.50.880|MF_00419|PF02769|PF13507|PTHR10099|PTHR10099:SF1|SM01211|SSF109736|SSF52317|SSF55326|SSF56042|SSF82697|TIGR01735 PGJ_RS07445 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003488 DNA recombination-mediator protein A GO:0009294 G3DSA:3.40.50.450|PF02481|PTHR32039|PTHR32039:SF8|SSF102405|TIGR00732 PGJ_RS07450 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 PGJ_RS07455 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008565|IPR018247|IPR018537|IPR023346 EF-Hand 1, calcium-binding site|Lysozyme-like domain|Peptidoglycan binding domain|Protein of unknown function DUF847 G3DSA:1.20.141.10|PF05838|PF09374|PS00018|SSF53955 PGJ_RS07460 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003370 Chromate transporter GO:0015109|GO:0015703 PF02417|PTHR33567 PGJ_RS07465 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003370 Chromate transporter GO:0015109|GO:0015703 PF02417|PTHR33567|PTHR33567:SF2 PGJ_RS07470 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR019847 Gliding motility associated protein GldN TIGR03523 PGJ_RS07475 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR019859|IPR022719|IPR022720 Gliding motility-associated protein GldM|Gliding motility-associated protein GldM, C-terminal|Gliding motility-associated protein GldM, N-terminal PF12080|PF12081|TIGR03517 PGJ_RS07480 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR019852 Gliding motility-associated protein, GldL TIGR03513 PGJ_RS07485 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|PTHR23150:SF19|SSF56436 PGJ_RS07490 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR019861 Type IX secretion system membrane protein, PorP/SprF family PF11751|TIGR03519 PGJ_RS07495 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021527 Protein of unknown function DUF2795 PF11387 PGJ_RS07500 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF7|SSF56954 PGJ_RS07505 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic G3DSA:2.40.50.100|PF13437|PTHR32347|PTHR32347:SF16 PGJ_RS07510 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF342|SM00382|SSF52540 PGJ_RS07515 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30572|PTHR30572:SF6 PGJ_RS07520 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30572 PGJ_RS07525 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002505|IPR012188|IPR012301|IPR012302|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic enzyme, phosphate acetyl/butaryl transferase|NAD(P)-binding domain|Phosphate acetyl/butaryl transferase GO:0004471|GO:0004473|GO:0005829|GO:0006108|GO:0008152|GO:0016616|GO:0016746|GO:0030145|GO:0046872|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.10750|G3DSA:3.40.50.720|PF00390|PF01515|PF03949|PIRSF036684|PTHR23406|PTHR23406:SF23|SM00919|SM01274|SSF51735|SSF53223|SSF53659 PGJ_RS07535 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003500|IPR004785 Ribose 5-phosphate isomerase B|Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0004751|GO:0005975|GO:0006098|GO:0016853 G3DSA:3.40.1400.10|PF02502|PIRSF005384|PTHR30345|SSF89623|TIGR00689|TIGR01120 PGJ_RS07540 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005474|IPR005475|IPR009014|IPR020826|IPR029061|IPR033247 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase family|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PS00802|PTHR11624|PTHR11624:SF1|SM00861|SSF52518|SSF52922 PGJ_RS07545 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000421|IPR000933|IPR008979|IPR013781|IPR017853 Coagulation factor 5/8 C-terminal domain|Galactose-binding domain-like|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 29 GO:0004560|GO:0005975 G3DSA:2.60.120.260|G3DSA:3.20.20.80|PF00754|PF01120|PTHR10030|PTHR10030:SF28|SM00812|SSF49785|SSF51445 PGJ_RS07550 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000192|IPR010969|IPR015421|IPR015422|IPR015424 Aminotransferase class V domain|Cysteine desulfurase-related, unknown function|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PTHR11601|PTHR11601:SF43|SSF53383|TIGR01977 PGJ_RS07555 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021778 Protein of unknown function DUF3343 PF11823 PGJ_RS07560 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004536|IPR010918|IPR016188|IPR023061 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Selenophosphate synthetase|Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00625|PF00586|PF02769|PIRSF036407|PTHR10256|SSF55326|SSF56042|TIGR00476 PGJ_RS07565 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001375|IPR015943|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0006508|GO:0008236 G3DSA:2.130.10.10|G3DSA:3.40.50.1820|PF00326|PTHR11731|PTHR11731:SF75|SSF53474|SSF82171 PGJ_RS07570 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000741|IPR013785|IPR023014 Aldolase-type TIM barrel|Fructose-bisphosphate aldolase class I, Gram positive bacteria-type|Fructose-bisphosphate aldolase, class-I GO:0003824|GO:0004332|GO:0006096 G3DSA:3.20.20.70|MF_00729|PF00274|PTHR11627|PTHR11627:SF20|SSF51569 PGJ_RS07580 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|PTHR23321|SM01387|SSF47060|TIGR00952 PGJ_RS07585 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|PTHR30477|PTHR30477:SF1|SSF53807 PGJ_RS07590 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 PGJ_RS07595 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 PGJ_RS07600 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005665|IPR005791|IPR022645|IPR022646|IPR022813 Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01463_B|MF_01464_B|PF02355|PF07549|PR01755|PTHR30081|PTHR30081:SF8|SSF82866|TIGR00916|TIGR00966|TIGR01129 PGJ_RS07605 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000999|IPR011907|IPR014720 Double-stranded RNA-binding domain|Ribonuclease III|Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396|GO:0016075 G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF14622|PS00517|PTHR11207|SM00358|SM00535|SSF54768|SSF69065|TIGR02191 PGJ_RS07610 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|PTHR11712|SM00825|SSF53901|TIGR03150 PGJ_RS07615 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003231|IPR009081 Acyl carrier protein (ACP)|Phosphopantetheine binding ACP domain GO:0006633 G3DSA:1.10.1200.10|MF_01217|PD000887|PF00550|PTHR20863|SSF47336|TIGR00517 PGJ_RS07620 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002376|IPR004607 Formyl transferase, N-terminal|Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189|GO:0009058|GO:0016742 G3DSA:3.40.50.170|MF_01930|PF00551|PTHR10520|PTHR10520:SF9|SSF53328 PGJ_RS07625 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 PGJ_RS07630 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000523|IPR001208|IPR003593|IPR004482|IPR014721|IPR020568|IPR025158|IPR027417 AAA+ ATPase domain|MCM domain|Magnesium chelatase ChlI domain|Mg chelatase-related protein|Mg chelatase-related protein, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003677|GO:0005524|GO:0006260 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF01078|PF13335|PF13541|PR01657|PTHR32039|PTHR32039:SF7|SM00382|SSF52540|SSF54211|TIGR00368 PGJ_RS07635 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS07640 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS07650 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002319|IPR004188|IPR004529|IPR010978|IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit|tRNA-binding arm GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|PTHR11538|SSF46589|SSF55681|TIGR00468 PGJ_RS07655 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000445|IPR003265|IPR003651|IPR004035|IPR004036|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, conserved site-2|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PIRSF001435|PS00764|PS01155|PTHR10359|SM00478|SM00525|SSF48150|TIGR01083 PGJ_RS07660 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SM00014|SSF48317 PGJ_RS07665 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417 CarD-like/TRCF domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transcription-repair coupling factor|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|MF_00969|PF00270|PF00271|PF02559|PF03461|PTHR14025|PTHR14025:SF21|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540|TIGR00580 PGJ_RS07670 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|PTHR21237|SSF51064|SSF58014 PGJ_RS07675 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253 Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|PTHR24078|PTHR24078:SF190|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349 PGJ_RS07680 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002744 Domain of unknown function DUF59 PF01883|PTHR13696|PTHR13696:SF62|SSF117916 PGJ_RS07685 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR34990|SSF56300 PGJ_RS07690 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002589 Macro domain G3DSA:3.40.220.10|PF01661|PTHR11106|SM00506|SSF52949 PGJ_RS07695 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001917|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008152|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00599|PTHR13693|SSF53383 PGJ_RS07700 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000764|IPR006083|IPR026008|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase/uridine kinase|Uridine kinase|Uridine kinase-like GO:0004849|GO:0005524|GO:0008152|GO:0016301|GO:0016773 G3DSA:3.40.50.300|MF_00551|PF00485|PR00988|PTHR10285|SSF52540|TIGR00235 PGJ_RS07705 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018584 Glycosyltransferase family 87 GO:0016758 PF09594 PGJ_RS07710 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF95|SSF53448 PGJ_RS07715 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002509|IPR011330|IPR022560 Domain of unknown function DUF3473|Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PF11959|SSF88713 PGJ_RS07730 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021428 Protein of unknown function DUF3078 PF11276 PGJ_RS07735 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025668 Transposase DDE domain PF13612 PGJ_RS07740 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012424 Conjugative transposon, TraJ, C-terminal PF07863 PGJ_RS07745 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS07750 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000169|IPR004134 Cysteine peptidase, cysteine active site|Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 G3DSA:3.90.70.10|PF03051|PIRSF005700|PS00139|SSF54001 PGJ_RS07755 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001567|IPR024077|IPR024079|IPR024080 Metallopeptidase, catalytic domain|Neurolysin/Thimet oligopeptidase, N-terminal|Neurolysin/Thimet oligopeptidase, domain 2|Peptidase M3A/M3B GO:0004222|GO:0006508|GO:0008237 G3DSA:1.10.1370.10|G3DSA:1.20.1050.40|G3DSA:3.40.390.10|PF01432|PTHR11804|PTHR11804:SF8|SSF55486 PGJ_RS07760 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025079 Domain of unknown function DUF3943 PF13084 PGJ_RS07765 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025896 Spi protease inhibitor PF13734 PGJ_RS07770 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999|PTHR32468|PTHR32468:SF0 PGJ_RS07775 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004193|IPR006047|IPR006048|IPR006407|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 1,4-alpha-glucan-branching enzyme, GlgB|Alpha-amylase/branching enzyme, C-terminal all beta|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0003844|GO:0004553|GO:0005975|GO:0005978|GO:0043169 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF02806|PF02922|PIRSF000463|PTHR10357|PTHR10357:SF110|SM00642|SSF51011|SSF51445|SSF81296 PGJ_RS07780 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001098|IPR002298|IPR002421|IPR002562|IPR008918|IPR012337|IPR018320|IPR019760|IPR020045|IPR020046|IPR029060 3'-5' exonuclease domain|5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA-directed DNA polymerase, family A, conserved site|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN domain-like|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006139|GO:0006260|GO:0006261|GO:0008408 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF01612|PF02739|PR00868|PS00447|PTHR10133|PTHR10133:SF27|SM00279|SM00474|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593 PGJ_RS07790 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR009057|IPR011006|IPR011990|IPR018060|IPR018062|IPR019734 CheY-like superfamily|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Histidine kinase-like ATPase, C-terminal domain|Homeodomain-like|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0000155|GO:0000160|GO:0003677|GO:0003700|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.287.130|G3DSA:1.25.40.10|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF12833|PF13424|PR00344|PS00041|PTHR24423|SM00028|SM00342|SM00387|SM00388|SM00448|SSF46689|SSF47384|SSF48452|SSF52172|SSF55874 PGJ_RS07795 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026444 Secretion system C-terminal sorting domain TIGR04183 PGJ_RS07810 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR024492 Protein of unknown function DUF2764 PD181473|PF10962 PGJ_RS07815 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000194|IPR000793|IPR004100|IPR020003|IPR022878|IPR027417|IPR031686 ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPsynthase alpha/beta subunit, N-terminal extension|P-loop containing nucleoside triphosphate hydrolase|V-type ATP synthase catalytic alpha chain GO:0005524|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0046034 G3DSA:3.40.50.300|MF_00309|PF00006|PF02874|PF16886|PS00152|PTHR15184|PTHR15184:SF7|SSF47917|SSF52540 PGJ_RS07820 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000194|IPR004100|IPR027417 ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015992|GO:0046034 G3DSA:3.40.50.300|PF00006|PF02874|PTHR15184|PTHR15184:SF11|SSF52540 PGJ_RS07825 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002699 ATPase, V1 complex, subunit D GO:0042626 PF01813 PGJ_RS07830 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 PF01496|PTHR11629 PGJ_RS07835 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 G3DSA:1.20.120.610|PF00137|SSF81333 PGJ_RS07840 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0008152|GO:0015969|GO:0016597 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|PTHR21262|PTHR21262:SF0|SM00471|SM00954|SSF109604|SSF81271|SSF81301|TIGR00691 PGJ_RS07845 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002869|IPR011894|IPR019752 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016491|GO:0016625|GO:0016903|GO:0055114 G3DSA:3.40.920.10|PF01558|PTHR32154|PTHR32154:SF15|SSF53323|TIGR02175 PGJ_RS07850 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PTHR18968|PTHR18968:SF117|SSF52518 PGJ_RS07860 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002880|IPR009014|IPR029061|IPR033412 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF01855|PF17147|PTHR32154|PTHR32154:SF19|SSF52518|SSF52922 PGJ_RS07865 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12838|PS00198|PTHR24960|PTHR24960:SF50|SSF54862 PGJ_RS07870 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002694|IPR006171|IPR006295|IPR013264|IPR030846 DNA primase DnaG, bacteria|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|Toprim domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF13155|PIRSF002811|PTHR30313|SM00400|SM00493|SSF56731|SSF57783|TIGR01391 PGJ_RS07875 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003329|IPR004528|IPR029044 3-deoxy-D-manno-octulosonate cytidylyltransferase|Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0005737|GO:0008690 G3DSA:3.90.550.10|MF_00057|PF02348|PTHR21485|PTHR21485:SF4|SSF53448|TIGR00466 PGJ_RS07880 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003680|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain G3DSA:3.40.50.360|PF02525|PTHR10204|PTHR10204:SF42|SSF52218 PGJ_RS07885 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PF01578|PTHR30071 PGJ_RS07890 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007816 ResB-like domain PF05140 PGJ_RS07900 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003321|IPR011031|IPR017570|IPR023155 Cytochrome c-552/4|Cytochrome c552|Formate-dependent cytochrome c nitrite reductase, c552 subunit|Multihaem cytochrome GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 G3DSA:1.10.710.10|G3DSA:1.20.140.10|MF_01182|PF02335|PIRSF000243|PTHR30633|SSF48695 PGJ_RS07905 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005126|IPR011031|IPR017571 Cytochrome c nitrite reductase, small subunit|Multihaem cytochrome|NapC/NirT cytochrome c, N-terminal GO:0016021|GO:0022900 G3DSA:1.10.3820.10|PF03264|PTHR30333|SSF48695|TIGR03153 PGJ_RS07915 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005546|IPR025665 Autotransporter beta-domain|Outer membrane protein beta-barrel domain PF13568|SSF103515 PGJ_RS07920 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR029065 Enolase|Enolase C-terminal domain-like|Enolase N-terminal domain-like|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|PTHR11902|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 PGJ_RS07925 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR010652 Protein of unknown function DUF1232 PF06803 PGJ_RS07930 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 PGJ_RS07940 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|PTHR24096|PTHR24096:SF193|SSF56801 PGJ_RS07945 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001650|IPR004589|IPR011545|IPR011991|IPR014001|IPR027417|IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain|DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0005524|GO:0006310|GO:0008026 G3DSA:1.10.10.10|G3DSA:3.40.50.300|PF00270|PF00271|PF16124|PTHR13710|PTHR13710:SF81|SM00487|SM00490|SSF52540|TIGR00614 PGJ_RS07950 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS07955 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS07960 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013534 Starch synthase, catalytic domain PF08323|PTHR12526|PTHR12526:SF17|SSF53756 PGJ_RS07965 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025366 Protein of unknown function DUF4270 PF14092 PGJ_RS07970 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004740|IPR020846 Major facilitator superfamily domain|Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 G3DSA:1.20.1250.20|PF03825|PTHR23522|PTHR23522:SF4|SSF103473|TIGR00889 PGJ_RS07975 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003961|IPR011628|IPR018832 Cleaved adhesin|Fibronectin type III|Peptidase C25, gingipain, C-terminal GO:0005515 PF07675|PF10365|SM00060 PGJ_RS07980 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016181|IPR016732|IPR024320 Acyl-CoA N-acyltransferase|Phosphatidylglycerol lysyltransferase, C-terminal|Uncharacterised conserved protein UCP018688 G3DSA:3.40.630.30|PF09924|PIRSF018688|PTHR41373|SSF55729 PGJ_RS07985 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13527|SSF55729 PGJ_RS07990 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001769|IPR005536|IPR011628|IPR012600|IPR013783|IPR018832|IPR029030|IPR029031 Caspase-like domain|Cleaved adhesin|Gingipain|Gingipain propeptide|Gingipain, N-terminal|Immunoglobulin-like fold|Peptidase C25, Ig-like domain|Peptidase C25, gingipain, C-terminal GO:0004197|GO:0006508|GO:0008233|GO:0008234 G3DSA:2.60.40.10|G3DSA:3.40.50.10390|G3DSA:3.40.50.1460|PF01364|PF03785|PF07675|PF08126|PF10365|SSF52129 PGJ_RS07995 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS08000 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025668 Transposase DDE domain PF13612 PGJ_RS08005 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006056|IPR006175|IPR013813|IPR019897 Endoribonuclease L-PSP/chorismate mutase-like|RidA family|RidA, conserved site|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PS01094|PTHR11803|SSF55298|TIGR00004 PGJ_RS08010 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001537|IPR004441|IPR013123|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|RNA methyltransferase TrmH family|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PF08032|PTHR12029|SM00967|SSF55315|SSF75217|TIGR00186 PGJ_RS08015 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003395|IPR004604|IPR027417 DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0005524|GO:0006281|GO:0006310 G3DSA:3.40.50.300|PF02463|PIRSF003128|PTHR11059|SSF52540|TIGR00634 PGJ_RS08020 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032274 Protein of unknown function DUF4835 PF16119 PGJ_RS08025 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003382|IPR005252|IPR007085 Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavoprotein GO:0003824|GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|PTHR14359|PTHR14359:SF20|SSF102645|SSF52507|TIGR00521 PGJ_RS08030 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012337|IPR013520 Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF00929|PTHR30231|PTHR30231:SF9|SM00479|SSF53098 PGJ_RS08035 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001001|IPR022634|IPR022635|IPR022637 DNA polymerase III, beta chain|DNA polymerase III, beta chain, C-terminal|DNA polymerase III, beta chain, N-terminal|DNA polymerase III, beta chain, central GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|PF00712|PF02767|PF02768|PIRSF000804|PTHR30478|SM00480|SSF55979|TIGR00663 PGJ_RS08040 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002698|IPR024185 5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain G3DSA:3.40.50.10420|PF01812|PIRSF006806|PTHR23407|PTHR23407:SF1|SSF100950|TIGR02727 PGJ_RS08045 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.90.226.10|PF03572|PF13180|PTHR32060|PTHR32060:SF9|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 PGJ_RS08050 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002125|IPR015517|IPR016192|IPR016193|IPR016473 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like|Deoxycytidylate deaminase|Deoxycytidylate deaminase-related GO:0003824|GO:0004132|GO:0006220|GO:0008270|GO:0016787 G3DSA:3.40.140.10|PF00383|PIRSF006019|PS00903|PTHR11086|SSF53927 PGJ_RS08055 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018594 Domain of unknown function DUF2023 G3DSA:3.30.2190.10|PF09633|SSF160448 PGJ_RS08060 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001094|IPR001226|IPR008254|IPR010086|IPR029039 Flavodoxin, conserved site|Flavodoxin, long chain|Flavodoxin-like|Flavodoxin/nitric oxide synthase|Flavoprotein-like domain GO:0009055|GO:0010181|GO:0055114 G3DSA:3.40.50.360|PF00258|PIRSF038996|PR00369|PS00201|PTHR19384|PTHR19384:SF73|SSF52218|TIGR01752 PGJ_RS08065 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004381|IPR018193 Glycerate kinase|Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 G3DSA:3.90.1510.10|PF02595|PIRSF006078|PTHR21599|PTHR21599:SF0|SSF110738|TIGR00045 PGJ_RS08070 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025420|IPR027417 Domain of unknown function DUF4143|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13173|PF13635|PTHR33295|SSF52540 PGJ_RS08080 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000157|IPR001611|IPR003591|IPR013684|IPR025875|IPR027417|IPR032675 Leucine rich repeat 4|Leucine-rich repeat|Leucine-rich repeat domain, L domain-like|Leucine-rich repeat, typical subtype|Mitochondrial Rho-like|P-loop containing nucleoside triphosphate hydrolase|Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0005525|GO:0007165|GO:0007264 G3DSA:3.40.50.10140|G3DSA:3.40.50.300|G3DSA:3.80.10.10|PF08477|PF12799|PF13676|PF13855|PTHR24365|SM00255|SM00365|SM00369|SSF52058|SSF52200|SSF52540 PGJ_RS08090 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 PF04140 PGJ_RS08095 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|SSF53335 PGJ_RS08100 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR023636|IPR023637 Urocanase|Urocanase conserved site GO:0016153 G3DSA:3.40.1770.10|G3DSA:3.40.50.10730|MF_00577|PF01175|PIRSF001423|PS01233|PTHR12216|PTHR12216:SF3|SSF111326|TIGR01228 PGJ_RS08105 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003509|IPR011335|IPR011856 Restriction endonuclease type II-like|Uncharacterised protein family UPF0102|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|MF_00048|PF02021|PTHR34039|PTHR34039:SF1|SSF52980 PGJ_RS08110 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13444|PTHR37323|PTHR37323:SF1|SSF55729 PGJ_RS08115 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PF01553|PTHR37323|PTHR37323:SF1|SM00563|SSF69593 PGJ_RS08120 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004670|IPR023171 Na+/H+ antiporter NhaA|Na/H antiporter domain GO:0006814|GO:0006885|GO:0016021 G3DSA:1.20.1530.10|MF_01844|PF06965|PTHR30341|PTHR30341:SF0|TIGR00773 PGJ_RS08125 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009080|IPR014729|IPR015273|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423 G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|PTHR10890|SM00840|SSF47323|SSF52374|TIGR00435 PGJ_RS08130 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PTHR11584|PTHR11584:SF382|SSF52151 PGJ_RS08135 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PF13632|PTHR22916|PTHR22916:SF30|SSF53448 PGJ_RS08140 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029140 Major fimbrial subunit protein, C-terminal PF15495 PGJ_RS08145 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS08150 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000933|IPR013781|IPR016286|IPR017853 Alpha-L-fucosidase, metazoa-type|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 29 GO:0004560|GO:0005975|GO:0006004 G3DSA:3.20.20.80|PF01120|PR00741|PTHR10030|PTHR10030:SF25|SM00812|SSF51445 PGJ_RS08155 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003414|IPR024953|IPR025198|IPR025200 Polyphosphate kinase|Polyphosphate kinase C-terminal domain|Polyphosphate kinase N-terminal domain|Polyphosphate kinase middle domain GO:0006799|GO:0008976|GO:0009358 G3DSA:3.30.1840.10|G3DSA:3.30.870.10|PF02503|PF13089|PF13090|PIRSF015589|PTHR30218|PTHR30218:SF0|SSF140356|SSF143724|SSF56024|TIGR03705 PGJ_RS08160 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005225|IPR006073|IPR016496|IPR025121|IPR027417|IPR032305 GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PIRSF006809|PR00326|PTHR10229|PTHR10229:SF0|SSF52540|TIGR00231|TIGR03156 PGJ_RS08165 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001763|IPR017582|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Rhodanese-like domain|tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 G3DSA:3.40.250.10|G3DSA:3.40.50.300|PF00581|PTHR30401|PTHR30401:SF0|SM00450|SSF52540|SSF52821|TIGR03167 PGJ_RS08170 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001455|IPR003787|IPR019870|IPR027396 DsrEFH-like|Selenium metabolism protein YedF|Sulphur relay, DsrE/F-like protein|TusA-like domain G3DSA:3.30.110.40|G3DSA:3.40.1260.10|PF01206|PF02635|PS01148|PTHR33279|PTHR33279:SF3|SSF64307|SSF75169|TIGR03527 PGJ_RS08200 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 PGJ_RS08205 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR022385 Rhs repeat-associated core GO:0097264 PTHR11219|TIGR03696 PGJ_RS08215 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|PTHR11964|SSF55973|TIGR01034 PGJ_RS08220 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006282|IPR007371|IPR007373 Thiamin pyrophosphokinase|Thiamin pyrophosphokinase, catalytic domain|Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0004788|GO:0005524|GO:0006772|GO:0009229|GO:0030975 G3DSA:3.40.50.10240|PF04263|SM00983|SSF63999|TIGR01378 PGJ_RS08225 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PF04973|PTHR36122|PTHR36122:SF1|TIGR01528 PGJ_RS08230 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF38|SSF56935 PGJ_RS08235 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004881|IPR010914|IPR012340|IPR027417|IPR031944 Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Ribosome biogenesis GTPase RsgA, N-terminal|Ribosome biogenesis GTPase RsgA, putative|RsgA type GTPase domain GO:0003924|GO:0005525 G3DSA:1.10.40.50|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01820|PF03193|PF16745|PTHR32120|PTHR32120:SF2|SSF50249|SSF52540|TIGR00157 PGJ_RS08240 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002661|IPR023584 Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|MF_00040|PF01765|PTHR20982|SSF55194|TIGR00496 PGJ_RS08245 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001048|IPR011817|IPR015963 Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|PTHR21499|PTHR21499:SF23|SSF53633|TIGR02075 PGJ_RS08250 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011004|IPR032533 Protein of unknown function DUF4954|Trimeric LpxA-like G3DSA:2.160.10.10|PF16314|SSF51161 PGJ_RS08255 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|MF_01368|PF01196|PS01167|PTHR14413|PTHR14413:SF5|SSF64263|TIGR00059 PGJ_RS08260 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009025|IPR011260|IPR011262|IPR011263|IPR011773 DNA-directed RNA polymerase, RBP11-like dimerisation domain|DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:2.170.120.12|MF_00059|PD001179|PF01000|PF01193|PF03118|PTHR32108|PTHR32108:SF0|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 PGJ_RS08265 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001912|IPR002942|IPR005709|IPR018079|IPR022801 RNA-binding S4 domain|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|PTHR11831|PTHR11831:SF4|SM00363|SM01390|SSF55174|TIGR01017 PGJ_RS08270 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001971|IPR018102|IPR019981 Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|PTHR11759|SSF53137|TIGR03632 PGJ_RS08275 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001892|IPR010979|IPR018269|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13, conserved site|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PS00646|PTHR10871|SSF46946|TIGR03631 PGJ_RS08280 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004368|IPR006196|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|PTHR33370|SM00316|SSF50249|TIGR00008 PGJ_RS08285 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000994|IPR001714|IPR002467 Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|PTHR10804|PTHR10804:SF41|SSF55920|TIGR00500 PGJ_RS08290 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY subunit domain|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00755|PS00756|PTHR10906|PTHR10906:SF2|SSF103491|TIGR00967 PGJ_RS08295 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001196|IPR005749|IPR021131|IPR030878 Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L15, conserved site|Ribosomal protein L18e/L15P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|PS00475|PTHR12934|SSF52080|TIGR01071 PGJ_RS08300 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005996|IPR016082|IPR018038 Ribosomal protein L30, bacterial-type|Ribosomal protein L30, conserved site|Ribosomal protein L30, ferredoxin-like fold domain GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.1390.20|MF_01371_B|PF00327|PIRSF002211|PS00634|PTHR15892|PTHR15892:SF2|SSF55129|TIGR01308 PGJ_RS08305 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000851|IPR005324|IPR005712|IPR013810|IPR014720|IPR014721|IPR018192|IPR020568 Double-stranded RNA-binding domain|Ribosomal protein S5|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|PTHR13718|SSF54211|SSF54768|TIGR01021 PGJ_RS08310 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|PTHR12899|SSF53137|TIGR00060 PGJ_RS08315 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000702|IPR002358|IPR019906|IPR020040 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, bacterial-type|Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|MF_01365_B|PF00347|PIRSF002162|PR00059|PS00525|PTHR11655|PTHR11655:SF14|SSF56053|TIGR03654 PGJ_RS08320 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PS00053|PTHR11758|SSF56047 PGJ_RS08325 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001209|IPR018271|IPR023036 Ribosomal protein S14|Ribosomal protein S14, bacterial/plastid|Ribosomal protein S14, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_00537|PF00253|PS00527|PTHR19836|SSF57716 PGJ_RS08330 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002132|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PTHR11994|SSF55282 PGJ_RS08335 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003256|IPR005824|IPR005825|IPR008991|IPR014722 KOW|Ribosomal protein L2 domain 2|Ribosomal protein L24|Ribosomal protein L24/L26, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF00467|PF17136|PS01108|PTHR12903|SM00739|SSF50104|TIGR01079 PGJ_RS08340 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000218|IPR005745|IPR019972 Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|PTHR11761|SM01374|SSF50193|TIGR01067 PGJ_RS08345 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000266|IPR012340|IPR019979|IPR019984 Nucleic acid-binding, OB-fold|Ribosomal protein S17, bacterial-type|Ribosomal protein S17, conserved site|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PS00056|PTHR10744|SSF50249|TIGR03635 PGJ_RS08350 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|SSF46561|TIGR00012 PGJ_RS08355 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000114|IPR016180|IPR020798 Ribosomal protein L10e/L16|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00701|PTHR12220|SSF54686|TIGR01164 PGJ_RS08360 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280 K Homology domain|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|PTHR11760|PTHR11760:SF19|SM00322|SSF54814|SSF54821|TIGR01009 PGJ_RS08365 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001063|IPR005727 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|MF_01331_B|PF00237|PTHR13501|SSF54843|TIGR01044 PGJ_RS08370 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|PTHR11880|SSF54570|TIGR01050 PGJ_RS08375 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2 domain 2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 3|Translation protein SH3-like domain GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|PTHR13691|PTHR13691:SF5|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 PGJ_RS08380 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001014|IPR012677|IPR012678|IPR013025 Nucleotide-binding alpha-beta plait domain|Ribosomal protein L23/L15e core domain|Ribosomal protein L23/L25, conserved site|Ribosomal protein L25/L23 GO:0000166|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|PS00050|PTHR11620|SSF54189 PGJ_RS08385 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|MF_01328_B|PF00573|PTHR10746|SSF52166|TIGR03953 PGJ_RS08390 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000597|IPR009000|IPR019926|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation protein, beta-barrel domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.30.10|G3DSA:4.10.960.10|MF_01325_B|PF00297|PS00474|PTHR11229|SSF50447|TIGR03625 PGJ_RS08395 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001848|IPR018268|IPR027486 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|PTHR11700|SM01403|SSF54999|TIGR01049 PGJ_RS08400 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417|IPR031157 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|PTHR23115|PTHR23115:SF66|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 PGJ_RS08405 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000235|IPR005717|IPR023798 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PTHR11205|SSF47973|TIGR01029 PGJ_RS08410 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacteria|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|PTHR11652|SSF50249|TIGR00981 PGJ_RS08415 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS08420 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS08430 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001986|IPR006264|IPR013792|IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0016765 G3DSA:3.65.10.10|PF00275|PIRSF000505|PS00885|PTHR21090|PTHR21090:SF5|SSF55205 PGJ_RS08440 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001626|IPR029022 ABC transporter, BtuC-like|ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 PF00950|PTHR30477|PTHR30477:SF0|SSF81345 PGJ_RS08445 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|SM00028|SSF48452 PGJ_RS08450 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR12277|SSF53474 PGJ_RS08455 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001236|IPR001557|IPR010945|IPR015955|IPR016040|IPR022383 L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|Malate dehydrogenase, type 2|NAD(P)-binding domain GO:0003824|GO:0005975|GO:0006108|GO:0016491|GO:0016615|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|PF00056|PF02866|PIRSF000102|PTHR23382|PTHR23382:SF0|SSF51735|SSF56327 PGJ_RS08460 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS08465 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS08475 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716|PTHR21716:SF7 PGJ_RS08480 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000924|IPR004514|IPR011035|IPR014729|IPR020056|IPR020058|IPR020059|IPR020061|IPR022861 Glutamine-tRNA ligase, bacterial|Glutamine-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004819|GO:0005524|GO:0005737|GO:0006412|GO:0006418|GO:0006425|GO:0016876|GO:0043039 G3DSA:1.10.1160.10|G3DSA:2.40.240.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00126|PF00749|PF03950|PR00987|PTHR11451|PTHR11451:SF29|SSF50715|SSF52374|TIGR00440 PGJ_RS08485 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032816|IPR032818 DedA family|SNARE associated Golgi protein PF09335|PTHR30353|PTHR30353:SF13 PGJ_RS08490 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003740|IPR019264 Domain of unknown function DUF2179|Uncharacterised membrane protein YitT PF02588|PF10035|PIRSF006483|PTHR33545|PTHR33545:SF5 PGJ_RS08495 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|SSF51735 PGJ_RS08500 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025668 Transposase DDE domain PF13612 PGJ_RS08505 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003702|IPR026888 Acetyl-CoA hydrolase/transferase|Acetyl-CoA hydrolase/transferase C-terminal domain GO:0003824|GO:0006084 G3DSA:3.40.1080.10|G3DSA:3.40.810.20|PF02550|PF13336|PTHR21432|PTHR21432:SF18|SSF100950 PGJ_RS08515 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001705|IPR011332 Ribosomal protein L33|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00294|PF00471|PTHR15238|PTHR15238:SF3|SSF57829|TIGR01023 PGJ_RS08520 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001383|IPR026569 Ribosomal protein L28|Ribosomal protein L28/L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00830|PTHR13528|SSF143800|TIGR00009 PGJ_RS08525 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 PF01384|PTHR11101|PTHR11101:SF16 PGJ_RS08530 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005902|IPR010992 Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|SSF47729|TIGR01201 PGJ_RS08535 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003812 Fido domain G3DSA:1.10.3290.10|PF02661|PTHR13504|PTHR13504:SF29|SSF140931 PGJ_RS08540 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|PTHR17490|SSF55821|TIGR00057 PGJ_RS08545 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003362|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PF02397|PTHR30576|TIGR03025 PGJ_RS08550 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000644|IPR001807|IPR014743 CBS domain|Chloride channel, core|Chloride channel, voltage gated GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|G3DSA:3.10.580.10|PF00571|PF00654|PR00762|PTHR11689|PTHR11689:SF14|SSF54631|SSF81340 PGJ_RS08555 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006685|IPR010920|IPR011014|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PTHR30221|PTHR30221:SF7|SSF50182|SSF82689|SSF82861 PGJ_RS08560 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13432|PTHR23083|SM00028|SSF48452 PGJ_RS08565 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026444 Secretion system C-terminal sorting domain TIGR04183 PGJ_RS08610 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20 PGJ_RS08615 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|SSF56925 PGJ_RS08630 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002218|IPR004416|IPR020595|IPR023753|IPR026904 FAD/NAD(P)-binding domain|GidA associated domain 3|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0002098|GO:0008033|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PS01280|PS01281|PTHR11806|PTHR11806:SF0|SM01228|SSF51905|TIGR00136 PGJ_RS08635 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000305|IPR001162|IPR001943|IPR004791|IPR010994|IPR027299 GIY-YIG domain|GIY-YIG nuclease superfamily|RuvA domain 2-like|UVR domain|UvrABC system, subunit C|UvrC family homology region GO:0005515|GO:0005737|GO:0006281|GO:0009380|GO:0009381 G3DSA:1.10.150.20|G3DSA:3.40.1440.10|G3DSA:4.10.860.10|MF_00203|PF01541|PF08459|PF14520|PTHR30562|PTHR30562:SF1|SM00465|SSF46600|SSF47781|SSF82771|TIGR00194 PGJ_RS08640 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003732|IPR023509 D-Tyr tRNAtyr deacylase-like domain|D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 G3DSA:3.50.80.10|MF_00518|PF02580|PTHR10472|SSF69500|TIGR00256 PGJ_RS08645 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004518|IPR012359 NTP pyrophosphohydrolase MazG, putative catalytic core|NTP pyrophosphohydrolase MazG-related, YpjD G3DSA:1.10.287.1080|PF03819|PIRSF029904|PTHR14552|PTHR14552:SF13|SSF101386 PGJ_RS08650 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002915|IPR011343|IPR013785 Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase|Deoxyribose-phosphate aldolase GO:0003824|GO:0004139|GO:0005737|GO:0009264|GO:0016829 G3DSA:3.20.20.70|PF01791|PIRSF001357|PTHR10889|SM01133|SSF51569|TIGR00126 PGJ_RS08655 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|PTHR12001|SSF48576 PGJ_RS08660 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR014985 WbqC-like protein family PF08889 PGJ_RS08665 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000223|IPR015927|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 G3DSA:2.10.109.10|PF00717|PR00727|PTHR12383|PTHR12383:SF14|SSF51306|TIGR02227 PGJ_RS08670 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000223|IPR015927|IPR019533|IPR019758|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|PF00717|PF10502|PR00727|PS00761|PTHR12383|PTHR12383:SF14|SSF51306|TIGR02227 PGJ_RS08675 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000846|IPR016040|IPR022663|IPR023940 Dihydrodipicolinate reductase|Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|NAD(P)-binding domain GO:0008839|GO:0009089|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01113|PF05173|PIRSF000161|PTHR20836|SSF51735|SSF55347|TIGR00036 PGJ_RS08680 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003607|IPR006261|IPR006674|IPR023293|IPR026875|IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase|Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain|Deoxyguanosinetriphosphate triphosphohydrolase, central domain|HD domain|HD/PDEase domain|Phosphohydrolase-associated domain GO:0000287|GO:0008832|GO:0046039 G3DSA:1.10.3210.10|G3DSA:1.10.3410.10|G3DSA:1.10.3550.10|PF01966|PF13286|PTHR11373|PTHR11373:SF29|SM00471|SSF109604|TIGR01353 PGJ_RS08685 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PF03601|PTHR30106|PTHR30106:SF1 PGJ_RS08695 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR008969|IPR012910|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF07715|PF13715|PTHR30069|PTHR30069:SF2|SSF49464|SSF56935 PGJ_RS08700 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003717|IPR012340|IPR022572 DNA replication/recombination mediator RecO, N-terminal|Nucleic acid-binding, OB-fold|Recombination protein O, RecO GO:0006281|GO:0006310 G3DSA:2.40.50.140|MF_00201|PF02565|PF11967|PTHR33991|SSF50249|SSF57863 PGJ_RS08705 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site GO:0000287|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF54|SSF53738|SSF55957 PGJ_RS08710 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000917|IPR012160|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Lipoteichoic acid synthase-like|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|PIRSF005091|PTHR10342|PTHR10342:SF236|SSF53649 PGJ_RS08715 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic PTHR38454|PTHR38454:SF1 PGJ_RS08720 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002376|IPR005793|IPR005794|IPR011034 Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|Methionyl-tRNA formyltransferase GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|PTHR11138|SSF50486|SSF53328|TIGR00460 PGJ_RS08725 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 PGJ_RS08730 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009061 Putative DNA-binding domain SSF46955 PGJ_RS08735 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.1360.10|G3DSA:3.40.50.300|PF13155|PF13481|SSF52540|SSF56731 PGJ_RS08740 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009061 Putative DNA-binding domain PF12728|SSF46955 PGJ_RS08750 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PF08843 PGJ_RS08755 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01549 PGJ_RS08770 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001917|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008152|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00599|PTHR13693|SSF53383 PGJ_RS08775 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057|IPR015893 Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|SSF46689 PGJ_RS08780 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000330|IPR001650|IPR003356|IPR007695|IPR016151|IPR021341|IPR027417|IPR029063 DNA methylase, adenine-specific|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS-like, N-terminal|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF2958|S-adenosyl-L-methionine-dependent methyltransferase|SNF2-related, N-terminal domain GO:0003677|GO:0005524|GO:0006298|GO:0006306|GO:0008170|GO:0030983 G3DSA:3.40.1170.10|G3DSA:3.40.50.150|G3DSA:3.40.50.300|PF00176|PF00271|PF01624|PF02384|PF11171|PR00507|SSF52540|SSF53335|SSF55271 PGJ_RS08785 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000380|IPR003601|IPR003602|IPR006171|IPR013497|IPR013824|IPR013825|IPR023405|IPR025589 DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|Topoisomerase C-terminal repeat|Toprim domain GO:0003677|GO:0003916|GO:0003917|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.40.50.140|PF01131|PF01751|PF13342|PR00417|PTHR11390|PTHR11390:SF21|SM00436|SM00437|SM00493|SSF56712 PGJ_RS08790 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025222|IPR025343 Protein of unknown function DUF3945|Protein of unknown function DUF4099 PF13101|PF13351 PGJ_RS08795 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|SSF52833 PGJ_RS08800 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|PTHR11017|SSF52058 PGJ_RS08805 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005901 GLPGLI family protein PF09697|TIGR01200 PGJ_RS08810 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008969|IPR012910|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.60.40.1120|PF13715|SSF49464|SSF56935 PGJ_RS08815 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR005074|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0006810|GO:0008233|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PF03412|PS00211|PTHR24221|PTHR24221:SF138|SM00382|SSF52540|SSF90123 PGJ_RS08825 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025988|IPR027417|IPR032689 P-loop containing nucleoside triphosphate hydrolase|TraD/TraG, TraM recognition site|YWFCY domain G3DSA:3.40.50.300|PF12696|PF14293|SSF52540 PGJ_RS08835 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic SSF56935 PGJ_RS08840 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005901 GLPGLI family protein TIGR01200 PGJ_RS08850 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025988|IPR027417|IPR032689 P-loop containing nucleoside triphosphate hydrolase|TraD/TraG, TraM recognition site|YWFCY domain G3DSA:3.40.50.300|PF12696|PF14293|SSF52540 PGJ_RS08855 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 PGJ_RS08870 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PTHR13696|SSF52540 PGJ_RS08875 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 PGJ_RS08885 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025408 Protein of unknown function DUF4134 PF13572 PGJ_RS08890 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025407 Protein of unknown function DUF4133 PF13571 PGJ_RS08895 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR022509|IPR024451|IPR027417 Conjugation system ATPase, TraG|Domain of unknown function DUF3875|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF12991|PTHR38467|SSF52540|TIGR03783 PGJ_RS08900 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025415 Protein of unknown function DUF4141 PF13605 PGJ_RS08905 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012424|IPR022393 Conjugative transposon, TraJ|Conjugative transposon, TraJ, C-terminal PF07863|TIGR03782 PGJ_RS08910 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR022276 Conjugative transposon, TraK TIGR03781 PGJ_RS08920 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR022187 Conjugative transposon, TraM PF12508|TIGR03779 PGJ_RS08925 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR022298 Conjugative transposon, TraN PF13595|TIGR03780 PGJ_RS08930 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018899 Conjugative transposon, TraO PF10626 PGJ_RS08935 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR024355 Protein of unknown function DUF3872 PF12988 PGJ_RS08940 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011664 Abortive infection system protein AbiD/AbiF-like PF07751 PGJ_RS08945 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005182 Domain of unknown function DUF304 PF03703|PTHR37938|PTHR37938:SF1 PGJ_RS08955 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF779|SSF53335 PGJ_RS08960 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007318 Phospholipid methyltransferase PF04191 PGJ_RS08980 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025586 PcfJ-like protein G3DSA:2.20.25.10|PF14284 PGJ_RS08985 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025624 PcfK-like protein PF14058 PGJ_RS09020 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR015082 Protein of unknown function DUF1896 G3DSA:1.10.8.330|G3DSA:1.10.8.340|PF08989|SSF140753 PGJ_RS09025 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018873 KilA-N, DNA-binding domain PF10543 PGJ_RS09030 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002104|IPR011010|IPR013762|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PF13102|PTHR30349|PTHR30349:SF26|SSF56349 PGJ_RS09040 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001769|IPR005536|IPR011628|IPR012600|IPR013783|IPR014756|IPR018832|IPR029030|IPR029031 Caspase-like domain|Cleaved adhesin|Gingipain|Gingipain propeptide|Gingipain, N-terminal|Immunoglobulin E-set|Immunoglobulin-like fold|Peptidase C25, Ig-like domain|Peptidase C25, gingipain, C-terminal GO:0004197|GO:0006508|GO:0008233|GO:0008234 G3DSA:2.60.40.10|G3DSA:3.40.50.10390|G3DSA:3.40.50.1460|PF01364|PF03785|PF07675|PF08126|PF10365|SSF52129|SSF81296 PGJ_RS09045 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PTHR23029|SM00855|SSF53254 PGJ_RS09055 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004369|IPR007214 Prolyl-tRNA editing protein, YbaK/EbsC|YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 G3DSA:3.90.960.10|PF04073|PIRSF006181|PTHR30411|PTHR30411:SF0|SSF55826|TIGR00011 PGJ_RS09060 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR024079|IPR032534|IPR033413|IPR033428 Domain of unknown function DUF5117|Domain of unknown function DUF5118|Domian of unknown function DUF4953|Metallopeptidase, catalytic domain GO:0008237 G3DSA:3.40.390.10|PF16313|PF17148|PF17162|PTHR38478|SSF55486 PGJ_RS09065 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025636 Protein of unknown function DUF4294 PF14127 PGJ_RS09070 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 PGJ_RS09075 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005259|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 G3DSA:3.40.50.300|MF_00983|PTHR30580|SSF52540|TIGR00595 PGJ_RS09080 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006004|IPR009051|IPR023753|IPR028261 Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|Glutamate synthase (NADPH), homotetrameric GO:0016491|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.50.50.60|PF07992|PF14691|PR00419|PTHR11938|PTHR11938:SF90|SSF46548|SSF51971|TIGR01316 PGJ_RS09085 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008333|IPR012165|IPR017938|IPR019480 Cytochrome-c3 hydrogenase, gamma subunit|Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0006221|GO:0016491|GO:0050660|GO:0051537|GO:0055114 G3DSA:2.10.240.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00970|PF10418|PIRSF006816|PTHR11938|PTHR11938:SF47|SSF52343|SSF63380 PGJ_RS09090 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002649|IPR016009|IPR023148|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, C-terminal|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PIRSF000386|PTHR32125|PTHR32125:SF1|SSF75217|TIGR00088 PGJ_RS09095 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005821|IPR028325 Ion transport domain|Voltage-gated potassium channel GO:0005216|GO:0005249|GO:0006811|GO:0006813|GO:0008076|GO:0016020|GO:0055085 G3DSA:1.10.287.70|PF00520|PR00169|PTHR11537|PTHR11537:SF137|SSF81324 PGJ_RS09105 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002502|IPR006619|IPR015510 N-acetylmuramoyl-L-alanine amidase domain|Peptidoglycan recognition protein|Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 G3DSA:3.40.80.10|PF01510|PTHR11022|SM00701|SSF55846 PGJ_RS09110 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005902|IPR010992 Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|SSF47729|TIGR01201 PGJ_RS09115 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000758|IPR027385 Outer membrane protein beta-barrel|Virulence-related outer membrane protein GO:0009279 PF13505|PS00695 PGJ_RS09120 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS09125 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS09130 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|SSF52833 PGJ_RS09135 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002678|IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria|GTP cyclohydrolase 1 type 2/Nif3 G3DSA:3.30.70.830|G3DSA:3.40.1390.30|PF01784|PIRSF037489|PTHR13799|SSF102705|TIGR00486 PGJ_RS09140 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003743 C4-type zinc ribbon domain PF02591|PTHR39082 PGJ_RS09145 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011063|IPR012094|IPR012795|IPR012796|IPR014729|IPR020825 Lysidine-tRNA(Ile) synthetase, C-terminal|Phenylalanyl-tRNA synthetase, B3/B4|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:3.40.50.620|MF_01161|PF01171|PF11734|PTHR11807|PTHR11807:SF2|SM00977|SSF52402|SSF56037|TIGR02432|TIGR02433 PGJ_RS09150 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003840|IPR010285|IPR011991|IPR027417|IPR029491 DNA helicase|DNA helicase Pif1-like|Helicase Helix-turn-helix domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0000723|GO:0003678|GO:0004386|GO:0005524|GO:0006281 G3DSA:1.10.10.10|G3DSA:3.40.50.300|PF05970|PF14493|PTHR23274|SSF52540 PGJ_RS09165 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR024623 Uncharacterised protein family YtxH PF12732 PGJ_RS09170 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002220|IPR005263|IPR013785|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00666|PTHR12128|PTHR12128:SF34|SM01130|SSF51569|TIGR00674 PGJ_RS09175 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004472|IPR027417 Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0004141|GO:0005524|GO:0009102 G3DSA:3.40.50.300|MF_00336|PF13500|PIRSF006755|PTHR21343|PTHR21343:SF0|SSF52540|TIGR00347 PGJ_RS09180 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006664|IPR006665|IPR006690 OmpA-like domain|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PF13488|PR01021|PS01068|PTHR30128|SSF103088 PGJ_RS09185 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005720|IPR012135|IPR013785 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1/ 2 GO:0003824|GO:0004152|GO:0005737|GO:0006222|GO:0016627|GO:0055114 G3DSA:3.20.20.70|PF01180|PIRSF000164|PTHR11938|PTHR11938:SF103|SSF51395 PGJ_RS09190 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609 PGJ_RS09205 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS09210 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS09215 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS09220 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000398|IPR020940|IPR023451 Thymidylate synthase|Thymidylate synthase, active site|Thymidylate synthase/dCMP hydroxymethylase domain GO:0004799|GO:0006231 G3DSA:3.30.572.10|MF_00008|PF00303|PR00108|PS00091|PTHR11548|SSF55831|TIGR03284 PGJ_RS09225 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001796|IPR012259|IPR024072 Dihydrofolate reductase|Dihydrofolate reductase domain|Dihydrofolate reductase-like domain GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 G3DSA:3.40.430.10|PF00186|PIRSF000194|PR00070|PTHR22778|PTHR22778:SF16|SSF53597 PGJ_RS09230 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004154|IPR004516|IPR015807 Anticodon-binding|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0004821|GO:0005524|GO:0005737|GO:0006427 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF03129|PF13393|PIRSF001549|PTHR11476|PTHR11476:SF1|SSF52954|SSF55681|TIGR00442 PGJ_RS09240 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004383|IPR007197|IPR013785|IPR027492 Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475 G3DSA:3.20.20.70|MF_01849|PF04055|PF13394|PIRSF006004|PTHR30544|PTHR30544:SF5|SSF102114|TIGR00048 PGJ_RS09245 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032286 Protein of unknown function DUF4837 PF16125 PGJ_RS09250 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005255|IPR024084 4-hydroxythreonine-4-phosphate dehydrogenase PdxA|Isopropylmalate dehydrogenase-like domain GO:0008615|GO:0016616|GO:0050570|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_00536|PF04166|PTHR30004|PTHR30004:SF6|SSF53659|TIGR00557 PGJ_RS09255 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004821|IPR014729 Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058 G3DSA:3.40.50.620|PF01467|PTHR10739|SSF52374|TIGR00125 PGJ_RS09260 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|PTHR24322|PTHR24322:SF513|SSF51735 PGJ_RS09265 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066 PGJ_RS09270 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic PTHR37323|PTHR37323:SF1|SSF69593 PGJ_RS09275 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000212|IPR014016|IPR014017|IPR027417 DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF00580|PF13361|PTHR11070|PTHR11070:SF24|SSF52540 PGJ_RS09315 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011579|IPR027417 ATPase domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01637|PTHR34301|PTHR34301:SF2|SSF52540 PGJ_RS09325 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005814|IPR005815|IPR015421|IPR015422|IPR015424 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004015|GO:0008483|GO:0009102|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00834|PF00202|PS00600|PTHR11986|PTHR11986:SF8|SSF53383|TIGR00508 PGJ_RS09330 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0004076|GO:0009102|GO:0051536 G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|PTHR22976|PTHR22976:SF1|SM00729|SM00876|SSF102114|TIGR00433 PGJ_RS09335 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000109|IPR018456|IPR020846 Major facilitator superfamily domain|PTR2 family proton/oligopeptide symporter, conserved site|Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0006857|GO:0016020 G3DSA:1.20.1250.20|PF00854|PS01023|PTHR11654|PTHR11654:SF119|SSF103473 PGJ_RS09340 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR032265 Protein of unknown function DUF4831 PF16115 PGJ_RS09345 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001412|IPR002305|IPR002306|IPR014729|IPR024109 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase|Tryptophan-tRNA ligase, bacterial-type GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|MF_00140_B|PF00579|PR01039|PS00178|PTHR10055|PTHR10055:SF10|SSF52374|TIGR00233 PGJ_RS09350 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021474 Protein of unknown function DUF3127 PF11325 PGJ_RS09355 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003742|IPR029026|IPR029028 Alpha/beta knot methyltransferases|SPOUT methyltransferase, predicted|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0005737|GO:0006364|GO:0008168 G3DSA:3.40.1280.10|MF_00658|PF02590|PIRSF004505|PTHR33603|PTHR33603:SF1|SSF75217 PGJ_RS09360 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002569|IPR002579|IPR011057|IPR028427 Mss4-like|Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MrsB|Peptide methionine sulphoxide reductase MsrA GO:0006979|GO:0008113|GO:0016671|GO:0030091|GO:0033743|GO:0055114 G3DSA:2.170.150.20|G3DSA:3.30.1060.10|MF_01400|MF_01401|PF01625|PF01641|PTHR10173|PTHR10173:SF31|SSF51316|SSF55068|TIGR00357|TIGR00401 PGJ_RS09370 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002524|IPR027469|IPR027470 Cation efflux protein|Cation efflux protein transmembrane domain|Cation efflux protein, cytoplasmic domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|PF01545|PF16916|PTHR11562|PTHR11562:SF18|SSF160240|SSF161111|TIGR01297 PGJ_RS09375 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006156|IPR006157 Dihydroneopterin aldolase|Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 G3DSA:3.30.1130.10|PF02152|PTHR20941|SM00905|SSF55620|TIGR00525|TIGR00526 PGJ_RS09380 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR031345 Protein of unknown function DUF5103 PF17116 PGJ_RS09385 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007452 Translocation and assembly module TamB PF04357 PGJ_RS09390 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000184 Bacterial surface antigen (D15) GO:0019867 G3DSA:2.40.160.50|PF01103|PTHR12815|PTHR12815:SF13 PGJ_RS09395 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007452|IPR007844 AsmA|Translocation and assembly module TamB PF04357|PF05170 PGJ_RS09400 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000842|IPR005946|IPR029057|IPR029099 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|MF_00583_B|PF13793|PF14572|PS00114|PTHR10210|PTHR10210:SF41|SM01400|SSF53271|TIGR01251 PGJ_RS09405 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|PTHR24031|SM00487|SM00490|SSF52540 PGJ_RS09415 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR026444 Secretion system C-terminal sorting domain G3DSA:2.130.10.140|SSF110296|TIGR04183 PGJ_RS09420 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011040|IPR026444 Secretion system C-terminal sorting domain|Sialidases G3DSA:2.120.10.10|TIGR04183 PGJ_RS09440 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025665 Outer membrane protein beta-barrel domain PF13568 PGJ_RS09445 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007197|IPR010722|IPR012726|IPR013785 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Radical SAM|Thiazole biosynthesis ThiH GO:0003824|GO:0005506|GO:0009228|GO:0051536|GO:0051539 G3DSA:3.20.20.70|PF04055|PF06968|PTHR22976|PTHR22976:SF17|SM00876|SSF102114|TIGR02351 PGJ_RS09450 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008867|IPR013785 Aldolase-type TIM barrel|Thiazole biosynthesis GO:0003824|GO:0009228 G3DSA:3.20.20.70|MF_00443|PF05690|PTHR34266|SSF110399 PGJ_RS09455 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003733|IPR013749|IPR013785|IPR022998|IPR029056 Aldolase-type TIM barrel|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|G3DSA:3.40.1190.20|MF_00097|PF02581|PF08543|PTHR20857|PTHR20857:SF15|SSF51391|SSF53613|TIGR00693 PGJ_RS09460 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002817|IPR025747 Phosphomethylpyrimidine synthase|ThiC-associated domain GO:0009228|GO:0051536 MF_00089|PF01964|PF13667|PTHR30557|PTHR30557:SF1|TIGR00190 PGJ_RS09465 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003749|IPR010035|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiS, thiamine-biosynthesis|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|PTHR34472|PTHR34472:SF1|SSF54285|TIGR01683 PGJ_RS09470 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS09475 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS09495 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000307|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|PTHR12919|SSF54565|TIGR00002 PGJ_RS09500 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR032806 H repeat-associated protein, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF13808|PTHR30298 PGJ_RS09505 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000683|IPR004104|IPR016040 NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF01408|PF02894|PTHR22604|SSF51735 PGJ_RS09510 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|PTHR13754|PTHR13754:SF15|SM00849|SSF56281 PGJ_RS09515 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006033|IPR006034|IPR020827|IPR027473|IPR027474|IPR027475 Asparaginase/glutaminase|Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|L-asparaginase, C-terminal domain|L-asparaginase, N-terminal|L-asparaginase, type I GO:0004067|GO:0006520 G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PIRSF500176|PR00139|PS00144|PS00917|PTHR11707|PTHR11707:SF28|SM00870|SSF53774|TIGR00519 PGJ_RS09530 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006424|IPR016040|IPR020828|IPR020829|IPR020830|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|PTHR10836|SM00846|SSF51735|SSF55347|TIGR01534 PGJ_RS09535 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003313|IPR009057|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|PR00032|PTHR11019|PTHR11019:SF80|SM00342|SSF46689|SSF51215 PGJ_RS09540 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Uncharacterised protein family UPF0001 G3DSA:3.20.20.10|PF01168|PIRSF004848|PS01211|PTHR10146|SSF51419|TIGR00044 PGJ_RS09545 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR027848 Protein of unknown function DUF4494 PF14902 PGJ_RS09550 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|PTHR32552:SF23|SSF53098 PGJ_RS09555 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 PGJ_RS09560 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005546|IPR021958 Autotransporter beta-domain|Protein of unknown function DUF3575 PF12099|SSF103515 PGJ_RS09565 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006665|IPR011990|IPR024480 Domain of unknown function DUF3868|OmpA-like domain|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.30.1330.60|PF00691|PF12984|SSF103088|SSF48452 PGJ_RS09570 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008110|IPR029141 Major fimbrial subunit protein, N-terminal|Porphyromonas gingivalis fimbrillin protein GO:0005198|GO:0007155|GO:0009289|GO:0009405 PD008717|PF06321|PR01737 PGJ_RS09575 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR014941 Fimbrillin-A associated anchor protein Mfa1/Mfa2 PF08842 PGJ_RS09580 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029141 Major fimbrial subunit protein, N-terminal PF06321 PGJ_RS09600 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003772 Protein of unknown function DUF177 PF02620 PGJ_RS09605 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|PTHR34069|PTHR34069:SF2|SSF53901|TIGR00747 PGJ_RS09610 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417 GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0003723|GO:0005525|GO:0005622 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|PTHR11649|PTHR11649:SF3|SSF52540|SSF54814|TIGR00231|TIGR00436 PGJ_RS09615 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005225|IPR006073|IPR015946|IPR016484|IPR027417|IPR032859 GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PF14714|PIRSF006485|PR00326|PTHR11649|PTHR11649:SF5|SSF52540|TIGR00231|TIGR03594 PGJ_RS09620 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021280 Protein of unknown function DUF2723 PF11028|PTHR16214|PTHR16214:SF2 PGJ_RS09625 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PTHR10587|SSF88713 PGJ_RS09630 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025668 Transposase DDE domain PF13612 PGJ_RS09635 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008471|IPR029063 MnmC-like methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0016645|GO:0055114 G3DSA:3.40.50.150|PF05430|PTHR39963 PGJ_RS09640 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000836|IPR010079|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like|Xanthine phosphoribosyltransferase GO:0009116|GO:0016763|GO:0043101|GO:0046110 G3DSA:3.40.50.2020|MF_01184|PF00156|PTHR11776|PTHR11776:SF1|SSF53271|TIGR01744 PGJ_RS09645 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006042|IPR006043|IPR017588 Uric acid permease UacT-like|Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085 PF00860|PS01116|PTHR11119|PTHR11119:SF44|TIGR00801|TIGR03173 PGJ_RS09650 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR025665 Outer membrane protein beta-barrel domain PF13568 PGJ_RS09655 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR018392|IPR028082 LysM domain|Periplasmic binding protein-like I G3DSA:3.10.350.10|G3DSA:3.40.50.2300|PF01476|PTHR21666|PTHR21666:SF219|SM00257|SSF53822|SSF54106 PGJ_RS09665 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PD004169|PF01640|PR00797|SSF54001 PGJ_RS09680 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002816 Pheromone shutdown, TraB PF01963 PGJ_RS09685 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006700|IPR015947|IPR029026|IPR029028 Alpha/beta knot methyltransferases|PUA-like domain|Ribosomal RNA small subunit methyltransferase E|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0006364|GO:0008168 G3DSA:3.40.1280.10|PF04452|PIRSF015601|PTHR30027|PTHR30027:SF3|SSF75217|SSF88697|TIGR00046 PGJ_RS09690 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007484 Peptidase M28 G3DSA:3.40.630.10|PF04389|PTHR12147|PTHR12147:SF16|SSF53187 PGJ_RS09695 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003808 Fe-S metabolism associated domain, SufE-like G3DSA:3.90.1010.10|PF02657|PTHR12735|PTHR12735:SF11|SSF82649 PGJ_RS09700 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002937|IPR004572|IPR023753|IPR027418 Amine oxidase|FAD/NAD(P)-binding domain|Protoporphyrinogen oxidase|Protoporphyrinogen oxidase, C-terminal domain GO:0004729|GO:0006779|GO:0016491|GO:0055114 G3DSA:1.10.3110.10|G3DSA:3.50.50.60|G3DSA:3.90.660.20|PF01593|PTHR10742|PTHR10742:SF294|SSF51905|SSF54373|TIGR00562 PGJ_RS09705 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PTHR11019|SM00342|SSF46689 PGJ_RS09710 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 PF02684|PTHR30372|PTHR30372:SF0|SSF53756|TIGR00215 PGJ_RS09715 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002828|IPR030048 Survival protein SurE|Survival protein SurE-like phosphatase/nucleotidase GO:0008252|GO:0016787 G3DSA:3.40.1210.10|MF_00060|PF01975|PTHR30457|SSF64167|TIGR00087 PGJ_RS09720 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001179|IPR023566 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type GO:0006457 G3DSA:3.10.50.40|PF00254|PTHR10516|PTHR10516:SF145|SSF54534 PGJ_RS09725 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002314|IPR002315|IPR004154|IPR022961|IPR027031 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Glycine-tRNA ligase, bacterial|Glycyl-tRNA synthetase|Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 GO:0000166|GO:0004812|GO:0004820|GO:0005524|GO:0005737|GO:0006418|GO:0006426 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00253_B|PF00587|PF03129|PR01043|PTHR10745|SSF52954|SSF55681|TIGR00389 PGJ_RS09735 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006665|IPR011990|IPR024480 Domain of unknown function DUF3868|OmpA-like domain|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.30.1330.60|PF00691|PF12984|SSF103088|SSF48452 PGJ_RS09740 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005546|IPR021958 Autotransporter beta-domain|Protein of unknown function DUF3575 G3DSA:2.40.128.130|PF12099|SSF103515 PGJ_RS09745 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS09755 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR020846 Major facilitator superfamily domain G3DSA:1.20.1250.20|PTHR23514|PTHR23514:SF10|SSF103473 PGJ_RS09760 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006139|IPR006140|IPR016040|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00670|PS00671|PTHR10996|SSF51735|SSF52283 PGJ_RS09770 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR012336|IPR013812|IPR021615 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain|Outer membrane protein Omp28|Thioredoxin-like fold GO:0004553|GO:0005975 G3DSA:2.60.40.320|G3DSA:3.40.30.10|PF11551 PGJ_RS09780 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PTHR10681|PTHR10681:SF107|SSF52833 PGJ_RS09790 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001041|IPR001433|IPR008333|IPR010205|IPR012675|IPR017938 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Na(+)-translocating NADH-quinone reductase subunit F|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0006814|GO:0009055|GO:0016021|GO:0016491|GO:0016655|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|MF_00430|PF00111|PF00175|PF00970|PIRSF000044|PTHR19370|PTHR19370:SF32|SSF52343|SSF54292|SSF63380|TIGR01941 PGJ_RS09795 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003667|IPR010967 Na(+)-translocating NADH-quinone reductase subunit E|Rnf-Nqr subunit, membrane protein GO:0009276|GO:0016020|GO:0016021|GO:0016655|GO:0022904|GO:0055114 MF_00429|PF02508|PIRSF006102|PTHR30335|PTHR30335:SF1|TIGR01940 PGJ_RS09800 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003667|IPR011292 Na(+)-translocating NADH-quinone reductase subunit D|Rnf-Nqr subunit, membrane protein GO:0016020|GO:0016655|GO:0055114 MF_00428|PF02508|PIRSF006102|PTHR30586|PTHR30586:SF1|TIGR01939 PGJ_RS09805 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007329|IPR010204 FMN-binding|Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016020|GO:0016021|GO:0016655|GO:0055114 MF_00427|PF04205|PIRSF009437|PTHR37838|PTHR37838:SF1|SM00900|TIGR01938 PGJ_RS09810 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004338|IPR010966 NADH-quinone reductase NQR2/RnfD|Na(+)-translocating NADH-quinone reductase subunit B GO:0006810|GO:0009276|GO:0010181|GO:0016020|GO:0016021|GO:0016655|GO:0022904|GO:0055114 MF_00426|PF03116|PIRSF016055|PTHR30578|PTHR30578:SF1|TIGR01937 PGJ_RS09815 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR008703|IPR022615 Na(+)-translocating NADH-quinone reductase subunit A|Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0006814|GO:0016655|GO:0055114 G3DSA:2.40.50.100|MF_00425|PF05896|PF11973|PTHR37839|PTHR37839:SF1|TIGR01936 PGJ_RS09820 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR006260|IPR008756 Peptidase M56|TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|PF05569|PTHR33446|PTHR33446:SF2|SSF74653|TIGR01352 PGJ_RS09825 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005650|IPR011991 BlaI transcriptional regulatory family|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0045892 G3DSA:1.10.10.10|PF03965|PIRSF019455|PTHR34134|PTHR34134:SF1|SSF46785 PGJ_RS09830 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000537|IPR004657|IPR026046 1,4-dihydroxy-2-naphthoate octaprenyltransferase|UbiA prenyltransferase domain containing protein 1|UbiA prenyltransferase family GO:0004659|GO:0009234|GO:0016021|GO:0046428 MF_01937|PF01040|PIRSF005355|PTHR13929|PTHR13929:SF0|TIGR00751 PGJ_RS09835 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR022653|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PR01179|PR01181|PS00878|PTHR11482|PTHR11482:SF5|SSF50621|SSF51419|TIGR01048 PGJ_RS09840 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001048|IPR001341|IPR005260|IPR018042 Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase GO:0004072|GO:0008652|GO:0009089 G3DSA:3.40.1160.10|PF00696|PIRSF000726|PS00324|PTHR21499|PTHR21499:SF3|SSF53633|SSF55021|TIGR00657 PGJ_RS09845 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF470|SM00382|SSF52540 PGJ_RS09850 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011055|IPR016047|IPR018392 Duplicated hybrid motif|LysM domain|Peptidase M23 G3DSA:2.70.70.10|G3DSA:3.10.350.10|PF01476|PF01551|PTHR21666|SM00257|SSF51261|SSF54106 PGJ_RS09855 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598|PTHR35604 PGJ_RS09860 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002559|IPR012337|IPR014736|IPR025399 Domain of unknown function DUF4372|Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609|PF14294|PTHR33258|PTHR33258:SF1|SSF53098 PGJ_RS09870 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR22726|PTHR22726:SF1 PGJ_RS09875 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10 PGJ_RS09880 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PTHR19211|PTHR19211:SF60|SM00382|SSF52540 PGJ_RS09885 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13371|PF13432|PTHR23083|SM00028|SSF48452 PGJ_RS09890 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|PTHR10458|SSF56420|TIGR00079 PGJ_RS09895 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005227|IPR006641|IPR012337 Putative pre-16S rRNA nuclease|Ribonuclease H-like domain|YqgF/RNase H-like domain GO:0003676|GO:0006139|GO:0006364 G3DSA:3.30.420.140|MF_00651|PF03652|PTHR33317|SM00732|SSF53098|TIGR00250 PGJ_RS09900 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR001599|IPR002890|IPR008930 Alpha-2-macroglobulin|Alpha-2-macroglobulin, N-terminal|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0004866 G3DSA:1.50.10.20|PF00207|PF01835|PTHR11412|PTHR11412:SF80|SM01360|SSF48239 PGJ_RS09905 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003710|IPR008927|IPR013328|IPR013332|IPR013752|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Ketopantoate reductase ApbA/PanE|Ketopantoate reductase, C-terminal domain|Ketopantoate reductase, N-terminal domain|NAD(P)-binding domain GO:0005737|GO:0008677|GO:0015940|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF02558|PF08546|PTHR21708|PTHR21708:SF26|SSF48179|SSF51735|TIGR00745 PGJ_RS09910 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003439|IPR003593|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PTHR19211|PTHR19211:SF38|SM00382|SSF52540 PGJ_RS09915 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR002225|IPR016040 3-beta hydroxysteroid dehydrogenase/isomerase|NAD(P)-binding domain GO:0003854|GO:0006694|GO:0016616|GO:0055114 G3DSA:3.40.50.720|PF01073|PTHR10366|SSF51735 PGJ_RS09920 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226 PGJ_RS09925 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226|PTHR33884 PGJ_RS09930 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004602|IPR013815|IPR017871|IPR027417 ABC transporter, conserved site|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|PS00211|PTHR32282|PTHR32282:SF2|SSF52540|TIGR00630 PGJ_RS09955 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR007419 BFD-like [2Fe-2S]-binding domain PF04324 PGJ_RS09960 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR021272 Protein of unknown function DUF2851 PF11013 PGJ_RS09965 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR12526|PTHR12526:SF387|SSF159283|SSF53448 PGJ_RS09970 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011050 Pectin lyase fold/virulence factor SSF51126 PGJ_RS09975 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005475|IPR005477|IPR009014|IPR020826|IPR029061|IPR033247|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase family|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00802|PTHR11624|PTHR11624:SF20|SM00861|SSF52518|SSF52922|TIGR00204 PGJ_RS09980 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003148|IPR006036|IPR006037|IPR016040 NAD(P)-binding domain|Potassium uptake protein TrkA|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, N-terminal GO:0005886|GO:0006813|GO:0008324|GO:0015079 G3DSA:3.30.70.1450|G3DSA:3.40.50.720|PF02080|PF02254|PR00335|PTHR16254|SSF116726|SSF51735 PGJ_RS09985 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR003445|IPR004772 Cation transporter|TrkH potassium transport family GO:0006812|GO:0008324|GO:0016021|GO:0022820|GO:0055085|GO:0071805 PF02386|PIRSF006247|PTHR32024|PTHR32024:SF2 PGJ_RS09995 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR005839|IPR006467|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|MiaB-like tRNA modifying enzyme|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|PF00919|PF04055|PS01278|PTHR11918|PTHR11918:SF45|SM00729|SSF102114|TIGR00089|TIGR01579 PGJ_RS10000 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PF03279|PTHR30606|PTHR30606:SF2 PGJ_RS10005 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13641|PTHR22916|PTHR22916:SF26|SSF53448 PGJ_RS10015 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR011991|IPR027395 Winged helix DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13601|PTHR37318|SSF46785 PGJ_RS10020 /var/genomes/g2d_mirror/Porphyromonas_gingivalis_AJW4/ASM127461v1_genomic IPR000531|IPR008969|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF13715|SSF49464|SSF56935