PGJ_RS06245 76513d30d1b3a37cac200c61f3f3882b 172 SUPERFAMILY SSF47729 31 116 3.09E-11 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS06245 76513d30d1b3a37cac200c61f3f3882b 172 Gene3D G3DSA:4.10.520.10 33 115 1.2E-6 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS06245 76513d30d1b3a37cac200c61f3f3882b 172 TIGRFAM TIGR01201 HU_rel: putative DNA-binding protein 1 172 2.1E-62 T 22-04-2016 IPR005902 Putative DNA-binding protein, HU-related PGJ_RS04345 209cb4a32d3ad236f27f23c69bbdd6c4 374 Gene3D G3DSA:3.40.50.300 4 319 5.7E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04345 209cb4a32d3ad236f27f23c69bbdd6c4 374 SUPERFAMILY SSF52540 259 324 1.12E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04345 209cb4a32d3ad236f27f23c69bbdd6c4 374 SUPERFAMILY SSF52540 4 223 1.12E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04345 209cb4a32d3ad236f27f23c69bbdd6c4 374 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 262 311 3.7E-8 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PGJ_RS04345 209cb4a32d3ad236f27f23c69bbdd6c4 374 Pfam PF13476 AAA domain 5 217 4.0E-8 T 22-04-2016 PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 PANTHER PTHR30069:SF2 402 650 5.8E-75 T 22-04-2016 PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 PANTHER PTHR30069:SF2 32 363 5.8E-75 T 22-04-2016 PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 SUPERFAMILY SSF56935 779 848 5.86E-88 T 22-04-2016 PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 SUPERFAMILY SSF56935 702 748 5.86E-88 T 22-04-2016 PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 SUPERFAMILY SSF56935 110 672 5.86E-88 T 22-04-2016 PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 PANTHER PTHR30069 402 650 5.8E-75 T 22-04-2016 PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 PANTHER PTHR30069 32 363 5.8E-75 T 22-04-2016 PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 Pfam PF00593 TonB dependent receptor 528 846 1.2E-22 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 SUPERFAMILY SSF49464 33 120 5.76E-17 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 Gene3D G3DSA:2.60.40.1120 35 109 5.4E-17 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 Gene3D G3DSA:2.170.130.10 110 240 2.7E-32 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 Pfam PF13715 CarboxypepD_reg-like domain 36 122 7.1E-25 T 22-04-2016 PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 237 5.6E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS05350 ee878af8aa2574a9bdf108dfd066b294 848 Gene3D G3DSA:2.40.170.20 241 848 1.2E-70 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS00860 135b1840620691c1dbc71824f4fceb78 505 Pfam PF14322 Starch-binding associating with outer membrane 59 248 2.9E-9 T 22-04-2016 PGJ_RS00860 135b1840620691c1dbc71824f4fceb78 505 Gene3D G3DSA:1.25.40.10 354 440 6.7E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS00860 135b1840620691c1dbc71824f4fceb78 505 Gene3D G3DSA:1.25.40.10 234 320 6.7E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS00860 135b1840620691c1dbc71824f4fceb78 505 SUPERFAMILY SSF48452 19 504 2.98E-68 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS00860 135b1840620691c1dbc71824f4fceb78 505 Pfam PF07980 SusD family 338 456 2.6E-17 T 22-04-2016 IPR012944 RagB/SusD domain PGJ_RS05255 eef3c92b8f4dcb9e0d6f17f4a565e532 218 SMART SM00740 40 107 6.4E-5 T 22-04-2016 IPR005543 PASTA domain PGJ_RS05255 eef3c92b8f4dcb9e0d6f17f4a565e532 218 SMART SM00740 109 180 10.0 T 22-04-2016 IPR005543 PASTA domain PGJ_RS05255 eef3c92b8f4dcb9e0d6f17f4a565e532 218 Pfam PF03793 PASTA domain 45 105 2.5E-9 T 22-04-2016 IPR005543 PASTA domain PGJ_RS05255 eef3c92b8f4dcb9e0d6f17f4a565e532 218 Pfam PF03793 PASTA domain 114 174 1.2E-4 T 22-04-2016 IPR005543 PASTA domain PGJ_RS05255 eef3c92b8f4dcb9e0d6f17f4a565e532 218 SUPERFAMILY SSF54184 44 105 4.58E-6 T 22-04-2016 PGJ_RS09175 84205453f3c8ca5e10a3ceeb43c90f96 217 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 10 180 2.4E-48 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 PGJ_RS09175 84205453f3c8ca5e10a3ceeb43c90f96 217 Gene3D G3DSA:3.40.50.300 7 201 6.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09175 84205453f3c8ca5e10a3ceeb43c90f96 217 PIRSF PIRSF006755 6 215 2.0E-54 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 PGJ_RS09175 84205453f3c8ca5e10a3ceeb43c90f96 217 SUPERFAMILY SSF52540 8 199 8.86E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09175 84205453f3c8ca5e10a3ceeb43c90f96 217 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 6 216 25.14 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 PGJ_RS09175 84205453f3c8ca5e10a3ceeb43c90f96 217 PANTHER PTHR21343:SF0 3 198 7.3E-54 T 22-04-2016 PGJ_RS09175 84205453f3c8ca5e10a3ceeb43c90f96 217 Pfam PF13500 AAA domain 8 197 2.7E-32 T 22-04-2016 PGJ_RS09175 84205453f3c8ca5e10a3ceeb43c90f96 217 PANTHER PTHR21343 3 198 7.3E-54 T 22-04-2016 PGJ_RS05980 6a163ee352be963472aee9087d87038e 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.9E-59 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PGJ_RS05980 6a163ee352be963472aee9087d87038e 251 Gene3D G3DSA:3.20.20.70 1 250 6.8E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS05980 6a163ee352be963472aee9087d87038e 251 Pfam PF00121 Triosephosphate isomerase 5 248 1.5E-93 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PGJ_RS05980 6a163ee352be963472aee9087d87038e 251 PANTHER PTHR21139 1 250 1.7E-121 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PGJ_RS05980 6a163ee352be963472aee9087d87038e 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PGJ_RS05980 6a163ee352be963472aee9087d87038e 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 251 39.219 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PGJ_RS05980 6a163ee352be963472aee9087d87038e 251 SUPERFAMILY SSF51351 1 250 1.7E-88 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PGJ_RS08345 9e103656c4e171151dc3ba653862cf8e 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 82 25.739 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08345 9e103656c4e171151dc3ba653862cf8e 84 SUPERFAMILY SSF50249 6 83 4.03E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS08345 9e103656c4e171151dc3ba653862cf8e 84 Gene3D G3DSA:2.40.50.140 6 83 5.6E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS08345 9e103656c4e171151dc3ba653862cf8e 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08345 9e103656c4e171151dc3ba653862cf8e 84 PANTHER PTHR10744 6 83 1.8E-39 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08345 9e103656c4e171151dc3ba653862cf8e 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.3E-36 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08345 9e103656c4e171151dc3ba653862cf8e 84 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 2.8E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08345 9e103656c4e171151dc3ba653862cf8e 84 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 2.8E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08345 9e103656c4e171151dc3ba653862cf8e 84 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 2.8E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08345 9e103656c4e171151dc3ba653862cf8e 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 11 74 4.0E-32 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08345 9e103656c4e171151dc3ba653862cf8e 84 Pfam PF00366 Ribosomal protein S17 11 78 1.5E-33 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08310 e8f5cce873a7bab28d3f55731159b29a 114 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 114 26.974 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08310 e8f5cce873a7bab28d3f55731159b29a 114 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 114 5.8E-42 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08310 e8f5cce873a7bab28d3f55731159b29a 114 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 114 5.5E-38 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08310 e8f5cce873a7bab28d3f55731159b29a 114 PANTHER PTHR12899 1 114 5.3E-36 T 22-04-2016 PGJ_RS08310 e8f5cce873a7bab28d3f55731159b29a 114 SUPERFAMILY SSF53137 4 112 3.05E-46 T 22-04-2016 PGJ_RS08310 e8f5cce873a7bab28d3f55731159b29a 114 Gene3D G3DSA:3.30.420.100 21 114 3.7E-36 T 22-04-2016 PGJ_RS02935 1188e38839d80499659839562869693d 798 PANTHER PTHR21075 527 797 8.5E-210 T 22-04-2016 PGJ_RS02935 1188e38839d80499659839562869693d 798 PANTHER PTHR21075 419 504 8.5E-210 T 22-04-2016 PGJ_RS02935 1188e38839d80499659839562869693d 798 PANTHER PTHR21075 306 398 8.5E-210 T 22-04-2016 PGJ_RS02935 1188e38839d80499659839562869693d 798 PANTHER PTHR21075 1 254 8.5E-210 T 22-04-2016 PGJ_RS02935 1188e38839d80499659839562869693d 798 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 419 797 2.0E-134 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PGJ_RS02935 1188e38839d80499659839562869693d 798 Gene3D G3DSA:3.20.70.20 126 251 5.8E-171 T 22-04-2016 PGJ_RS02935 1188e38839d80499659839562869693d 798 Gene3D G3DSA:3.20.70.20 303 777 5.8E-171 T 22-04-2016 PGJ_RS02935 1188e38839d80499659839562869693d 798 Pfam PF03477 ATP cone domain 7 93 1.2E-19 T 22-04-2016 IPR005144 ATP-cone domain PGJ_RS02935 1188e38839d80499659839562869693d 798 SUPERFAMILY SSF51998 121 260 2.11E-139 T 22-04-2016 PGJ_RS02935 1188e38839d80499659839562869693d 798 SUPERFAMILY SSF51998 313 776 2.11E-139 T 22-04-2016 PGJ_RS02935 1188e38839d80499659839562869693d 798 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 121 797 3.3E-207 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PGJ_RS04555 71f8b77a270813f80adc7b894d9320d4 449 PANTHER PTHR11647:SF1 1 435 3.5E-127 T 22-04-2016 PGJ_RS04555 71f8b77a270813f80adc7b894d9320d4 449 SUPERFAMILY SSF51556 58 376 3.03E-87 T 22-04-2016 IPR032466 Metal-dependent hydrolase PGJ_RS04555 71f8b77a270813f80adc7b894d9320d4 449 Pfam PF01979 Amidohydrolase family 55 426 2.7E-22 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PGJ_RS04555 71f8b77a270813f80adc7b894d9320d4 449 Gene3D G3DSA:2.30.40.10 2 73 1.9E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PGJ_RS04555 71f8b77a270813f80adc7b894d9320d4 449 Gene3D G3DSA:3.20.20.140 74 415 1.6E-100 T 22-04-2016 PGJ_RS04555 71f8b77a270813f80adc7b894d9320d4 449 ProSitePatterns PS00483 Dihydroorotase signature 2. 311 322 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS04555 71f8b77a270813f80adc7b894d9320d4 449 PANTHER PTHR11647 1 435 3.5E-127 T 22-04-2016 PGJ_RS04555 71f8b77a270813f80adc7b894d9320d4 449 SUPERFAMILY SSF51338 1 57 4.32E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PGJ_RS04555 71f8b77a270813f80adc7b894d9320d4 449 SUPERFAMILY SSF51338 375 436 4.32E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 Pfam PF17191 RecG wedge domain 8 157 4.5E-20 T 22-04-2016 IPR033454 RecG, wedge domain PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 SUPERFAMILY SSF50249 4 177 1.2E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 Gene3D G3DSA:2.40.50.140 45 141 2.5E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 660 6.5E-215 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 Pfam PF00271 Helicase conserved C-terminal domain 475 585 2.0E-16 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 Pfam PF00270 DEAD/DEAH box helicase 272 431 4.1E-20 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 PANTHER PTHR24031 267 281 1.0E-113 T 22-04-2016 PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 PANTHER PTHR24031 298 598 1.0E-113 T 22-04-2016 PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 PANTHER PTHR24031 622 687 1.0E-113 T 22-04-2016 PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 SMART SM00487 264 456 4.0E-36 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 SUPERFAMILY SSF52540 387 597 7.79E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 SUPERFAMILY SSF52540 183 450 4.58E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 Gene3D G3DSA:3.40.50.300 451 633 4.8E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 PANTHER PTHR24031:SF249 267 281 1.0E-113 T 22-04-2016 PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 PANTHER PTHR24031:SF249 298 598 1.0E-113 T 22-04-2016 PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 PANTHER PTHR24031:SF249 622 687 1.0E-113 T 22-04-2016 PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 SMART SM00490 501 585 1.1E-18 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS07215 2474895dd453df8ee8ae60764770f1d4 698 Gene3D G3DSA:3.40.50.300 260 450 2.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03885 58e219f2384ebb8007c9976d69bbdd70 382 PANTHER PTHR11496:SF65 1 380 3.1E-175 T 22-04-2016 PGJ_RS03885 58e219f2384ebb8007c9976d69bbdd70 382 PANTHER PTHR11496 1 380 3.1E-175 T 22-04-2016 PGJ_RS03885 58e219f2384ebb8007c9976d69bbdd70 382 Gene3D G3DSA:1.20.1090.10 180 381 3.6E-46 T 22-04-2016 PGJ_RS03885 58e219f2384ebb8007c9976d69bbdd70 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 354 2.4E-80 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PGJ_RS03885 58e219f2384ebb8007c9976d69bbdd70 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PGJ_RS03885 58e219f2384ebb8007c9976d69bbdd70 382 SUPERFAMILY SSF56796 1 379 2.62E-97 T 22-04-2016 PGJ_RS03885 58e219f2384ebb8007c9976d69bbdd70 382 Gene3D G3DSA:3.40.50.1970 1 179 1.6E-50 T 22-04-2016 PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 SUPERFAMILY SSF52540 21 219 6.16E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 SUPERFAMILY SSF52540 449 583 6.16E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 Gene3D G3DSA:1.10.8.280 302 418 5.3E-23 T 22-04-2016 PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 18 935 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 Gene3D G3DSA:1.20.1580.10 705 831 3.6E-52 T 22-04-2016 PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 PANTHER PTHR32282 14 953 0.0 T 22-04-2016 PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 Gene3D G3DSA:3.40.50.300 492 603 1.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 Gene3D G3DSA:3.40.50.300 832 952 2.6E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 Gene3D G3DSA:3.40.50.300 630 680 2.6E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 Gene3D G3DSA:3.40.50.300 16 65 1.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 ProSitePatterns PS00211 ABC transporters family signature. 841 855 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 Gene3D G3DSA:3.30.1490.20 215 256 6.0E-10 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 Gene3D G3DSA:3.30.1490.20 146 168 6.0E-10 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 PANTHER PTHR32282:SF2 14 953 0.0 T 22-04-2016 PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 SUPERFAMILY SSF52540 630 923 8.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 Gene3D G3DSA:1.20.1580.10 264 297 1.2E-48 T 22-04-2016 PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 Gene3D G3DSA:1.20.1580.10 106 144 1.2E-48 T 22-04-2016 PGJ_RS04095 20e5415ebe72da73117dc2ce90640f23 967 Gene3D G3DSA:1.20.1580.10 419 491 1.2E-48 T 22-04-2016 PGJ_RS04415 a58e08c24f613588ff3d9c9f56cc127c 144 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 143 2.3E-53 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 PGJ_RS04415 a58e08c24f613588ff3d9c9f56cc127c 144 PANTHER PTHR11241 1 143 6.8E-53 T 22-04-2016 PGJ_RS04415 a58e08c24f613588ff3d9c9f56cc127c 144 Gene3D G3DSA:2.70.40.10 8 143 4.9E-55 T 22-04-2016 IPR029054 dUTPase-like PGJ_RS04415 a58e08c24f613588ff3d9c9f56cc127c 144 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 1 143 33.778 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 PGJ_RS04415 a58e08c24f613588ff3d9c9f56cc127c 144 Pfam PF00692 dUTPase 12 142 3.4E-32 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 PGJ_RS04415 a58e08c24f613588ff3d9c9f56cc127c 144 SUPERFAMILY SSF51283 5 143 1.3E-52 T 22-04-2016 IPR029054 dUTPase-like PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 PANTHER PTHR24319 4 239 8.0E-65 T 22-04-2016 PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 7.5E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.5E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 7.5E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 Pfam PF00106 short chain dehydrogenase 4 191 5.5E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 PANTHER PTHR24319:SF32 4 239 8.0E-65 T 22-04-2016 PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 Gene3D G3DSA:3.40.50.720 2 229 6.0E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PGJ_RS05495 46fcdc03ca1884f2ff124007a9f3cbff 253 SUPERFAMILY SSF51735 2 228 1.37E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS04605 97a739b35a716ac20a131c67b9f41eeb 150 Pfam PF04170 NlpE N-terminal domain 55 114 3.4E-9 T 22-04-2016 IPR007298 Copper resistance lipoprotein NlpE PGJ_RS08905 6fade34198fdaac9d830e47b1c9d969e 375 Pfam PF07863 Homologues of TraJ from Bacteroides conjugative transposon 272 337 9.0E-23 T 22-04-2016 IPR012424 Conjugative transposon, TraJ, C-terminal PGJ_RS08905 6fade34198fdaac9d830e47b1c9d969e 375 TIGRFAM TIGR03782 Bac_Flav_CT_J: Bacteroides conjugative transposon TraJ protein 2 333 1.8E-161 T 22-04-2016 IPR022393 Conjugative transposon, TraJ PGJ_RS03500 ef5273aa885e69e8bdc22329fb0159a1 265 PIRSF PIRSF006816 1 265 2.2E-64 T 22-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 PGJ_RS03500 ef5273aa885e69e8bdc22329fb0159a1 265 PANTHER PTHR19370 5 249 7.1E-53 T 22-04-2016 PGJ_RS03500 ef5273aa885e69e8bdc22329fb0159a1 265 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 223 259 2.4E-13 T 22-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 PGJ_RS03500 ef5273aa885e69e8bdc22329fb0159a1 265 SUPERFAMILY SSF63380 3 104 7.7E-20 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PGJ_RS03500 ef5273aa885e69e8bdc22329fb0159a1 265 SUPERFAMILY SSF52343 112 259 2.23E-30 T 22-04-2016 PGJ_RS03500 ef5273aa885e69e8bdc22329fb0159a1 265 Gene3D G3DSA:3.40.50.80 114 221 8.0E-33 T 22-04-2016 PGJ_RS03500 ef5273aa885e69e8bdc22329fb0159a1 265 Gene3D G3DSA:2.10.240.10 223 261 9.3E-16 T 22-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 PGJ_RS03500 ef5273aa885e69e8bdc22329fb0159a1 265 Gene3D G3DSA:2.40.30.10 2 102 6.3E-25 T 22-04-2016 PGJ_RS03500 ef5273aa885e69e8bdc22329fb0159a1 265 PRINTS PR00409 Phthalate dioxygenase reductase family signature 194 202 7.6E-6 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PGJ_RS03500 ef5273aa885e69e8bdc22329fb0159a1 265 PRINTS PR00409 Phthalate dioxygenase reductase family signature 117 136 7.6E-6 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PGJ_RS03500 ef5273aa885e69e8bdc22329fb0159a1 265 Pfam PF00175 Oxidoreductase NAD-binding domain 118 208 9.3E-6 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PGJ_RS03500 ef5273aa885e69e8bdc22329fb0159a1 265 PANTHER PTHR19370:SF68 5 249 7.1E-53 T 22-04-2016 PGJ_RS07640 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS07640 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS05395 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS05395 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS00810 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS00810 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS08465 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS08465 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS05885 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS05885 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS07955 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS07955 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09475 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09475 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09555 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09555 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS01385 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS01385 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS08415 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS08415 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS00335 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS00335 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09120 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09120 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS02245 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS02245 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS06835 0bab9cc37027a1d54159f4f87ae9ceb0 126 SUPERFAMILY SSF46689 3 107 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS06835 0bab9cc37027a1d54159f4f87ae9ceb0 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS00085 908dc04bbdc457634b10f7b765bca104 333 Pfam PF01207 Dihydrouridine synthase (Dus) 15 317 5.2E-89 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PGJ_RS00085 908dc04bbdc457634b10f7b765bca104 333 PIRSF PIRSF006621 1 332 1.0E-100 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PGJ_RS00085 908dc04bbdc457634b10f7b765bca104 333 PANTHER PTHR11082 11 332 3.2E-121 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PGJ_RS00085 908dc04bbdc457634b10f7b765bca104 333 PANTHER PTHR11082:SF25 11 332 3.2E-121 T 22-04-2016 PGJ_RS00085 908dc04bbdc457634b10f7b765bca104 333 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 324 3.0E-94 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 PGJ_RS00085 908dc04bbdc457634b10f7b765bca104 333 Gene3D G3DSA:3.20.20.70 12 248 2.0E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS00085 908dc04bbdc457634b10f7b765bca104 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PGJ_RS00085 908dc04bbdc457634b10f7b765bca104 333 SUPERFAMILY SSF51395 12 321 2.75E-82 T 22-04-2016 PGJ_RS00085 908dc04bbdc457634b10f7b765bca104 333 Gene3D G3DSA:1.10.1200.80 260 324 3.8E-5 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 PGJ_RS02850 b2f069f91e83c18f5f87190c863555c5 306 PANTHER PTHR10996 39 305 1.6E-76 T 22-04-2016 PGJ_RS02850 b2f069f91e83c18f5f87190c863555c5 306 Gene3D G3DSA:3.40.50.720 2 111 4.7E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02850 b2f069f91e83c18f5f87190c863555c5 306 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 22 305 4.7E-31 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PGJ_RS02850 b2f069f91e83c18f5f87190c863555c5 306 SUPERFAMILY SSF51735 106 252 1.58E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02850 b2f069f91e83c18f5f87190c863555c5 306 PANTHER PTHR10996:SF20 39 305 1.6E-76 T 22-04-2016 PGJ_RS02850 b2f069f91e83c18f5f87190c863555c5 306 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 126 251 1.2E-35 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PGJ_RS02850 b2f069f91e83c18f5f87190c863555c5 306 SUPERFAMILY SSF52283 19 125 1.13E-35 T 22-04-2016 PGJ_RS02850 b2f069f91e83c18f5f87190c863555c5 306 Gene3D G3DSA:3.40.50.720 112 252 3.9E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02850 b2f069f91e83c18f5f87190c863555c5 306 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 136 163 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 Gene3D G3DSA:3.40.50.150 105 308 2.8E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 SUPERFAMILY SSF53335 105 303 3.7E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 SUPERFAMILY SSF52540 1829 2082 2.3E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 SUPERFAMILY SSF55271 639 718 4.71E-11 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 Gene3D G3DSA:3.40.1170.10 637 719 3.4E-13 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 Pfam PF00271 Helicase conserved C-terminal domain 1968 2039 1.4E-4 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 Gene3D G3DSA:3.40.50.300 1950 2041 9.9E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 Pfam PF02384 N-6 DNA Methylase 186 302 7.3E-7 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 Pfam PF00176 SNF2 family N-terminal domain 1682 1870 3.6E-6 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 SUPERFAMILY SSF52540 1678 1789 3.71E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 SUPERFAMILY SSF52540 1463 1615 3.71E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 Pfam PF11171 Protein of unknown function (DUF2958) 781 852 2.4E-8 T 22-04-2016 IPR021341 Protein of unknown function DUF2958 PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 Gene3D G3DSA:3.40.50.300 1679 1765 2.8E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 Gene3D G3DSA:3.40.50.300 1499 1613 2.8E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 Pfam PF01624 MutS domain I 640 719 2.2E-9 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 103 119 1.1E-5 T 22-04-2016 PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 191 203 1.1E-5 T 22-04-2016 PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 224 248 1.1E-5 T 22-04-2016 PGJ_RS08780 5d4cd4360163d040e50e8a455861892d 2397 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 129 143 1.1E-5 T 22-04-2016 PGJ_RS06650 1d75337b119f74d05379b14b961b2ea8 376 Pfam PF04055 Radical SAM superfamily 6 172 2.6E-22 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS06650 1d75337b119f74d05379b14b961b2ea8 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 4 350 1.2E-86 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- PGJ_RS06650 1d75337b119f74d05379b14b961b2ea8 376 Pfam PF06969 HemN C-terminal domain 298 364 5.5E-12 T 22-04-2016 IPR010723 HemN, C-terminal PGJ_RS06650 1d75337b119f74d05379b14b961b2ea8 376 SUPERFAMILY SSF102114 3 374 3.92E-112 T 22-04-2016 PGJ_RS06650 1d75337b119f74d05379b14b961b2ea8 376 PANTHER PTHR13932 2 376 9.2E-133 T 22-04-2016 PGJ_RS06650 1d75337b119f74d05379b14b961b2ea8 376 PANTHER PTHR13932:SF5 2 376 9.2E-133 T 22-04-2016 PGJ_RS06650 1d75337b119f74d05379b14b961b2ea8 376 Gene3D G3DSA:3.80.30.20 4 235 2.1E-45 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PGJ_RS06650 1d75337b119f74d05379b14b961b2ea8 376 SMART SM00729 1 219 9.9E-59 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 162 1.6E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 SUPERFAMILY SSF52540 8 275 1.31E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 511 9.4E-43 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 PRINTS PR00315 GTP-binding elongation factor signature 13 26 4.4E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 PRINTS PR00315 GTP-binding elongation factor signature 63 71 4.4E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 PRINTS PR00315 GTP-binding elongation factor signature 99 110 4.4E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 PRINTS PR00315 GTP-binding elongation factor signature 135 144 4.4E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 PRINTS PR00315 GTP-binding elongation factor signature 83 93 4.4E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 SUPERFAMILY SSF54980 390 464 1.22E-13 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 Gene3D G3DSA:2.40.30.10 290 391 5.1E-21 T 22-04-2016 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 Gene3D G3DSA:3.40.50.300 6 278 1.4E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 Pfam PF00009 Elongation factor Tu GTP binding domain 11 274 3.2E-52 T 22-04-2016 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 1 524 1.6E-206 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 Gene3D G3DSA:3.30.70.870 392 460 1.1E-8 T 22-04-2016 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 PANTHER PTHR23115:SF69 248 465 1.5E-233 T 22-04-2016 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 PANTHER PTHR23115:SF69 1 182 1.5E-233 T 22-04-2016 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 PANTHER PTHR23115 248 465 1.5E-233 T 22-04-2016 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 PANTHER PTHR23115 1 182 1.5E-233 T 22-04-2016 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 524 50.397 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 PGJ_RS00935 ceaebebfaf458fc92bfdcced09d92d6c 529 SUPERFAMILY SSF50447 258 390 7.78E-27 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 SUPERFAMILY SSF109604 303 463 1.37E-27 T 22-04-2016 PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 Pfam PF00013 KH domain 211 262 2.1E-5 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 TIGRFAM TIGR00277 HDIG: HDIG domain 325 401 2.1E-18 T 22-04-2016 IPR006675 HDIG domain PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 PANTHER PTHR12826 213 512 2.2E-124 T 22-04-2016 PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 Pfam PF12072 Domain of unknown function (DUF3552) 30 197 1.2E-37 T 22-04-2016 IPR022711 Ribonuclease Y, N-terminal PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 SMART SM00471 325 431 1.1E-11 T 22-04-2016 IPR003607 HD/PDEase domain PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 Gene3D G3DSA:3.30.1370.10 212 273 1.6E-5 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 Pfam PF01966 HD domain 330 420 1.6E-16 T 22-04-2016 IPR006674 HD domain PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 SMART SM00322 201 271 4.4E-4 T 22-04-2016 IPR004087 K Homology domain GO:0003676 PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 27 513 4.8E-194 T 22-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 Hamap MF_00335 Ribonuclease Y [rny]. 5 513 22.783 T 22-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 SUPERFAMILY SSF54791 199 296 4.71E-15 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 PGJ_RS06985 88a275ed92675c9950d17132e09ed04a 513 Gene3D G3DSA:1.10.3210.10 309 488 3.0E-41 T 22-04-2016 IPR006674 HD domain PGJ_RS08440 5bc9464fcda0bfae56b83b660820fe9a 268 SUPERFAMILY SSF81345 4 258 1.44E-27 T 22-04-2016 IPR029022 ABC transporter, BtuC-like PGJ_RS08440 5bc9464fcda0bfae56b83b660820fe9a 268 PANTHER PTHR30477:SF0 1 263 2.2E-68 T 22-04-2016 PGJ_RS08440 5bc9464fcda0bfae56b83b660820fe9a 268 Pfam PF00950 ABC 3 transport family 6 260 7.6E-62 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 PGJ_RS08440 5bc9464fcda0bfae56b83b660820fe9a 268 PANTHER PTHR30477 1 263 2.2E-68 T 22-04-2016 PGJ_RS07240 0337a2412f520179d8ddb3d80e8285af 399 Gene3D G3DSA:3.40.640.10 10 261 2.2E-98 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS07240 0337a2412f520179d8ddb3d80e8285af 399 PANTHER PTHR11808 2 399 7.5E-208 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PGJ_RS07240 0337a2412f520179d8ddb3d80e8285af 399 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 9 398 9.3E-180 T 22-04-2016 IPR006237 L-methionine gamma-lyase GO:0018826 PGJ_RS07240 0337a2412f520179d8ddb3d80e8285af 399 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 204 218 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PGJ_RS07240 0337a2412f520179d8ddb3d80e8285af 399 PANTHER PTHR11808:SF14 2 399 7.5E-208 T 22-04-2016 PGJ_RS07240 0337a2412f520179d8ddb3d80e8285af 399 SUPERFAMILY SSF53383 29 397 3.85E-125 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS07240 0337a2412f520179d8ddb3d80e8285af 399 PIRSF PIRSF001434 1 398 1.1E-149 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PGJ_RS07240 0337a2412f520179d8ddb3d80e8285af 399 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 395 1.7E-149 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PGJ_RS07240 0337a2412f520179d8ddb3d80e8285af 399 Gene3D G3DSA:3.90.1150.10 262 397 9.5E-54 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS09315 ad1eee4b347f0f4124239d246a94d431 390 PANTHER PTHR34301:SF2 4 381 6.8E-142 T 22-04-2016 PGJ_RS09315 ad1eee4b347f0f4124239d246a94d431 390 SUPERFAMILY SSF52540 7 293 1.82E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09315 ad1eee4b347f0f4124239d246a94d431 390 Pfam PF01637 ATPase domain predominantly from Archaea 20 263 9.6E-11 T 22-04-2016 IPR011579 ATPase domain GO:0005524 PGJ_RS09315 ad1eee4b347f0f4124239d246a94d431 390 PANTHER PTHR34301 4 381 6.8E-142 T 22-04-2016 PGJ_RS09315 ad1eee4b347f0f4124239d246a94d431 390 Gene3D G3DSA:3.40.50.300 7 217 1.6E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02415 b0c613a9e8907291127083390b31347f 232 SMART SM00382 30 209 7.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS02415 b0c613a9e8907291127083390b31347f 232 Pfam PF00005 ABC transporter 21 159 1.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS02415 b0c613a9e8907291127083390b31347f 232 Gene3D G3DSA:3.40.50.300 1 212 2.6E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02415 b0c613a9e8907291127083390b31347f 232 PANTHER PTHR24220 3 230 7.8E-73 T 22-04-2016 PGJ_RS02415 b0c613a9e8907291127083390b31347f 232 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS02415 b0c613a9e8907291127083390b31347f 232 SUPERFAMILY SSF52540 1 227 1.73E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08300 e431723dd77df594a32c0f8938b2ff1b 58 Gene3D G3DSA:3.30.1390.20 1 58 8.8E-29 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PGJ_RS08300 e431723dd77df594a32c0f8938b2ff1b 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 22-04-2016 IPR018038 Ribosomal protein L30, conserved site PGJ_RS08300 e431723dd77df594a32c0f8938b2ff1b 58 PIRSF PIRSF002211 1 58 9.5E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PGJ_RS08300 e431723dd77df594a32c0f8938b2ff1b 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 2.2E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PGJ_RS08300 e431723dd77df594a32c0f8938b2ff1b 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 4.6E-19 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PGJ_RS08300 e431723dd77df594a32c0f8938b2ff1b 58 PANTHER PTHR15892:SF2 1 58 1.2E-23 T 22-04-2016 PGJ_RS08300 e431723dd77df594a32c0f8938b2ff1b 58 PANTHER PTHR15892 1 58 1.2E-23 T 22-04-2016 PGJ_RS08300 e431723dd77df594a32c0f8938b2ff1b 58 SUPERFAMILY SSF55129 1 57 3.14E-20 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PGJ_RS08300 e431723dd77df594a32c0f8938b2ff1b 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 17.259 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PGJ_RS02300 389f1d2ac8c5e567751215dbd44ca766 178 SUPERFAMILY SSF50475 1 176 4.12E-36 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PGJ_RS02300 389f1d2ac8c5e567751215dbd44ca766 178 Gene3D G3DSA:2.30.110.10 1 173 2.0E-48 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PGJ_RS02300 389f1d2ac8c5e567751215dbd44ca766 178 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 14 172 9.9E-22 T 22-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related PGJ_RS02300 389f1d2ac8c5e567751215dbd44ca766 178 PANTHER PTHR34071 1 85 1.4E-21 T 22-04-2016 PGJ_RS02300 389f1d2ac8c5e567751215dbd44ca766 178 PANTHER PTHR34071 105 178 1.4E-21 T 22-04-2016 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 Pfam PF02080 TrkA-C domain 154 222 2.1E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 Pfam PF02080 TrkA-C domain 378 434 1.0E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 SUPERFAMILY SSF51735 230 365 4.6E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 SUPERFAMILY SSF51735 1 149 1.84E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 Pfam PF02254 TrkA-N domain 232 347 1.6E-16 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 Pfam PF02254 TrkA-N domain 3 123 9.6E-22 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 Gene3D G3DSA:3.30.70.1450 151 223 5.2E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 SUPERFAMILY SSF116726 376 446 5.23E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 Gene3D G3DSA:3.40.50.720 231 368 3.6E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 Gene3D G3DSA:3.40.50.720 1 149 1.0E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 PANTHER PTHR16254 1 163 8.4E-21 T 22-04-2016 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 SUPERFAMILY SSF116726 145 223 1.02E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.4E-12 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.4E-12 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 PRINTS PR00335 TrkA potassium uptake protein signature 303 317 2.4E-12 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 PRINTS PR00335 TrkA potassium uptake protein signature 279 289 2.4E-12 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PGJ_RS09980 781d7e9a3c883961ee1d0eee7bc7df82 446 PRINTS PR00335 TrkA potassium uptake protein signature 290 300 2.4E-12 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 148 157 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 PANTHER PTHR22573 29 577 2.8E-199 T 22-04-2016 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 Gene3D G3DSA:3.40.120.10 313 457 2.2E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 252 9.0E-8 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 147 161 9.0E-8 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 300 315 9.0E-8 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 PANTHER PTHR22573:SF54 29 577 2.8E-199 T 22-04-2016 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 Gene3D G3DSA:3.40.120.10 234 312 4.7E-22 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 SUPERFAMILY SSF53738 228 319 1.81E-21 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 328 450 6.7E-17 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 SUPERFAMILY SSF53738 38 240 4.41E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 520 563 8.6E-9 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 223 319 3.6E-25 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 SUPERFAMILY SSF53738 308 455 2.59E-25 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 50 190 2.1E-43 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 Gene3D G3DSA:3.30.310.50 482 576 2.9E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 SUPERFAMILY SSF55957 516 564 1.14E-10 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 SUPERFAMILY SSF55957 448 483 1.14E-10 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS08705 ee5b10b322a849deb7fbc7556eb9dc30 582 Gene3D G3DSA:3.40.120.10 25 219 8.8E-65 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS09640 ad0d47d38f062f47683d342fb3e02ac6 193 PANTHER PTHR11776:SF1 1 187 5.5E-78 T 22-04-2016 PGJ_RS09640 ad0d47d38f062f47683d342fb3e02ac6 193 Gene3D G3DSA:3.40.50.2020 1 190 5.9E-61 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS09640 ad0d47d38f062f47683d342fb3e02ac6 193 PANTHER PTHR11776 1 187 5.5E-78 T 22-04-2016 PGJ_RS09640 ad0d47d38f062f47683d342fb3e02ac6 193 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 190 3.4E-100 T 22-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 PGJ_RS09640 ad0d47d38f062f47683d342fb3e02ac6 193 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 188 38.66 T 22-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 PGJ_RS09640 ad0d47d38f062f47683d342fb3e02ac6 193 Pfam PF00156 Phosphoribosyl transferase domain 50 155 2.7E-6 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PGJ_RS09640 ad0d47d38f062f47683d342fb3e02ac6 193 SUPERFAMILY SSF53271 1 185 4.53E-42 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS04445 09d4569290d4f2b506654e30361fcfcc 157 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 35 144 5.2E-36 T 22-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain PGJ_RS07025 2cedd0ae686f936fdbfab5e77b8e6e52 125 Gene3D G3DSA:1.20.5.710 6 51 6.5E-8 T 22-04-2016 PGJ_RS07025 2cedd0ae686f936fdbfab5e77b8e6e52 125 SUPERFAMILY SSF48300 3 61 4.05E-13 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07025 2cedd0ae686f936fdbfab5e77b8e6e52 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 125 22.291 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07025 2cedd0ae686f936fdbfab5e77b8e6e52 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 8.7E-29 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 PGJ_RS07025 2cedd0ae686f936fdbfab5e77b8e6e52 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 1.3E-14 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07025 2cedd0ae686f936fdbfab5e77b8e6e52 125 Gene3D G3DSA:3.30.1390.10 52 125 1.1E-30 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PGJ_RS07025 2cedd0ae686f936fdbfab5e77b8e6e52 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 3.2E-36 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07025 2cedd0ae686f936fdbfab5e77b8e6e52 125 SUPERFAMILY SSF54736 54 125 2.62E-23 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PGJ_RS07025 2cedd0ae686f936fdbfab5e77b8e6e52 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 104 1.0E-17 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 PGJ_RS04965 e1f1083cc6ba63f049933c2fc317d6b3 236 PANTHER PTHR23291 1 236 5.2E-67 T 22-04-2016 IPR006214 Bax inhibitor 1-related PGJ_RS04965 e1f1083cc6ba63f049933c2fc317d6b3 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 22 232 4.7E-53 T 22-04-2016 PGJ_RS04965 e1f1083cc6ba63f049933c2fc317d6b3 236 PANTHER PTHR23291:SF42 1 236 5.2E-67 T 22-04-2016 PGJ_RS06845 51201888ff59c18abca2af4a37a59183 242 Gene3D G3DSA:3.40.1050.10 36 242 3.0E-53 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PGJ_RS06845 51201888ff59c18abca2af4a37a59183 242 PANTHER PTHR11002 41 241 1.0E-78 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PGJ_RS06845 51201888ff59c18abca2af4a37a59183 242 Pfam PF00484 Carbonic anhydrase 90 239 3.6E-39 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PGJ_RS06845 51201888ff59c18abca2af4a37a59183 242 SMART SM00947 83 242 3.2E-45 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PGJ_RS06845 51201888ff59c18abca2af4a37a59183 242 SUPERFAMILY SSF53056 40 242 1.7E-52 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PGJ_RS06845 51201888ff59c18abca2af4a37a59183 242 PANTHER PTHR11002:SF22 41 241 1.0E-78 T 22-04-2016 PGJ_RS04590 f530808ddceb7621de5bae3e46f0ec50 190 Pfam PF00498 FHA domain 96 170 4.8E-10 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PGJ_RS04590 f530808ddceb7621de5bae3e46f0ec50 190 Gene3D G3DSA:2.60.200.20 84 179 1.1E-14 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PGJ_RS04590 f530808ddceb7621de5bae3e46f0ec50 190 SUPERFAMILY SSF49879 83 177 1.57E-16 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 SUPERFAMILY SSF55261 292 417 4.8E-27 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 581 7.3E-219 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 Gene3D G3DSA:3.30.930.10 137 279 1.4E-109 T 22-04-2016 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 Gene3D G3DSA:3.30.930.10 413 582 1.4E-109 T 22-04-2016 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 Pfam PF02938 GAD domain 317 395 4.8E-13 T 22-04-2016 IPR029351 GAD domain PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 Pfam PF01336 OB-fold nucleic acid binding domain 19 102 2.1E-14 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 556 1.1E-105 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 562 34.167 T 22-04-2016 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 517 531 5.6E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 473 489 5.6E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 5.6E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 5.6E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 Gene3D G3DSA:2.40.50.140 1 107 4.5E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 SUPERFAMILY SSF50249 1 106 8.76E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 PANTHER PTHR22594 367 570 4.5E-246 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 PANTHER PTHR22594 1 300 4.5E-246 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 PANTHER PTHR22594:SF5 367 570 4.5E-246 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 PANTHER PTHR22594:SF5 1 300 4.5E-246 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 Gene3D G3DSA:3.30.1360.30 280 412 1.1E-38 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 SUPERFAMILY SSF55681 118 295 4.98E-101 T 22-04-2016 PGJ_RS00710 8972b01e627f6109fb595b730619454a 587 SUPERFAMILY SSF55681 423 584 4.98E-101 T 22-04-2016 PGJ_RS09995 f4752ff8e7d45f7fed8d352bdcf71f47 444 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 12 429 5.1E-107 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 PGJ_RS09995 f4752ff8e7d45f7fed8d352bdcf71f47 444 Pfam PF04055 Radical SAM superfamily 157 324 2.2E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS09995 f4752ff8e7d45f7fed8d352bdcf71f47 444 PANTHER PTHR11918:SF45 3 424 8.1E-111 T 22-04-2016 PGJ_RS09995 f4752ff8e7d45f7fed8d352bdcf71f47 444 SUPERFAMILY SSF102114 147 398 3.79E-49 T 22-04-2016 PGJ_RS09995 f4752ff8e7d45f7fed8d352bdcf71f47 444 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 15 421 5.2E-114 T 22-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 PGJ_RS09995 f4752ff8e7d45f7fed8d352bdcf71f47 444 Gene3D G3DSA:3.80.30.20 149 371 3.2E-62 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PGJ_RS09995 f4752ff8e7d45f7fed8d352bdcf71f47 444 PANTHER PTHR11918 3 424 8.1E-111 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein PGJ_RS09995 f4752ff8e7d45f7fed8d352bdcf71f47 444 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 155 175 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PGJ_RS09995 f4752ff8e7d45f7fed8d352bdcf71f47 444 Pfam PF00919 Uncharacterized protein family UPF0004 11 106 2.1E-24 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 PGJ_RS09995 f4752ff8e7d45f7fed8d352bdcf71f47 444 SMART SM00729 151 368 2.6E-38 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PGJ_RS06155 454c24c9c5cf037e0d1a59c87959cde3 450 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 6 450 31.048 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS06155 454c24c9c5cf037e0d1a59c87959cde3 450 Gene3D G3DSA:3.40.50.720 6 93 3.4E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS06155 454c24c9c5cf037e0d1a59c87959cde3 450 Gene3D G3DSA:3.40.1190.10 95 310 4.4E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06155 454c24c9c5cf037e0d1a59c87959cde3 450 SUPERFAMILY SSF51984 2 94 4.84E-13 T 22-04-2016 PGJ_RS06155 454c24c9c5cf037e0d1a59c87959cde3 450 PANTHER PTHR23135:SF2 1 450 1.5E-136 T 22-04-2016 PGJ_RS06155 454c24c9c5cf037e0d1a59c87959cde3 450 Gene3D G3DSA:3.90.190.20 313 446 2.0E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS06155 454c24c9c5cf037e0d1a59c87959cde3 450 SUPERFAMILY SSF53623 97 309 2.88E-49 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06155 454c24c9c5cf037e0d1a59c87959cde3 450 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 447 9.3E-115 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS06155 454c24c9c5cf037e0d1a59c87959cde3 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 383 1.3E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS06155 454c24c9c5cf037e0d1a59c87959cde3 450 SUPERFAMILY SSF53244 312 449 1.01E-40 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS06155 454c24c9c5cf037e0d1a59c87959cde3 450 PANTHER PTHR23135 1 450 1.5E-136 T 22-04-2016 PGJ_RS06155 454c24c9c5cf037e0d1a59c87959cde3 450 Pfam PF08245 Mur ligase middle domain 111 292 8.9E-30 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS05500 bbeecbaad3ab0a6a0c05ea1255511a7b 535 PIRSF PIRSF006439 1 535 7.2E-163 T 22-04-2016 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 PGJ_RS05500 bbeecbaad3ab0a6a0c05ea1255511a7b 535 PANTHER PTHR18968 282 533 7.0E-40 T 22-04-2016 PGJ_RS05500 bbeecbaad3ab0a6a0c05ea1255511a7b 535 Gene3D G3DSA:3.40.50.970 1 179 9.3E-56 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS05500 bbeecbaad3ab0a6a0c05ea1255511a7b 535 SUPERFAMILY SSF52518 1 202 1.18E-56 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS05500 bbeecbaad3ab0a6a0c05ea1255511a7b 535 Gene3D G3DSA:3.40.50.970 345 464 3.9E-17 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS05500 bbeecbaad3ab0a6a0c05ea1255511a7b 535 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 177 3.6E-14 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 PGJ_RS05500 bbeecbaad3ab0a6a0c05ea1255511a7b 535 PANTHER PTHR18968:SF91 282 533 7.0E-40 T 22-04-2016 PGJ_RS05500 bbeecbaad3ab0a6a0c05ea1255511a7b 535 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 378 511 5.4E-15 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PGJ_RS05500 bbeecbaad3ab0a6a0c05ea1255511a7b 535 SUPERFAMILY SSF52518 346 512 1.73E-22 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS08815 28ebe49e0760e0191e965a241cabb15a 738 Pfam PF00005 ABC transporter 514 663 4.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS08815 28ebe49e0760e0191e965a241cabb15a 738 Gene3D G3DSA:3.40.50.300 496 728 1.6E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08815 28ebe49e0760e0191e965a241cabb15a 738 Pfam PF00664 ABC transporter transmembrane region 180 445 3.7E-27 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PGJ_RS08815 28ebe49e0760e0191e965a241cabb15a 738 PANTHER PTHR24221 151 735 7.7E-151 T 22-04-2016 PGJ_RS08815 28ebe49e0760e0191e965a241cabb15a 738 PANTHER PTHR24221:SF138 151 735 7.7E-151 T 22-04-2016 PGJ_RS08815 28ebe49e0760e0191e965a241cabb15a 738 Pfam PF03412 Peptidase C39 family 4 129 6.2E-29 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 PGJ_RS08815 28ebe49e0760e0191e965a241cabb15a 738 SUPERFAMILY SSF90123 158 471 5.36E-57 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PGJ_RS08815 28ebe49e0760e0191e965a241cabb15a 738 ProSitePatterns PS00211 ABC transporters family signature. 635 649 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS08815 28ebe49e0760e0191e965a241cabb15a 738 SUPERFAMILY SSF52540 491 733 7.48E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08815 28ebe49e0760e0191e965a241cabb15a 738 SMART SM00382 523 709 6.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS08815 28ebe49e0760e0191e965a241cabb15a 738 Gene3D G3DSA:1.20.1560.10 165 470 3.0E-65 T 22-04-2016 PGJ_RS08815 28ebe49e0760e0191e965a241cabb15a 738 Gene3D G3DSA:3.90.70.10 7 128 1.4E-13 T 22-04-2016 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 PANTHER PTHR22573:SF48 1 460 1.6E-137 T 22-04-2016 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 397 458 5.0E-12 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 141 6.9E-29 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 Gene3D G3DSA:3.40.120.10 263 378 2.4E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 Gene3D G3DSA:3.30.310.50 379 459 6.5E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 PANTHER PTHR22573 1 460 1.6E-137 T 22-04-2016 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 3.7E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 244 259 3.7E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 182 201 3.7E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 SUPERFAMILY SSF53738 270 374 2.94E-21 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 SUPERFAMILY SSF53738 172 266 3.49E-25 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 Gene3D G3DSA:3.40.120.10 6 154 3.8E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 TIGRFAM TIGR03990 Arch_GlmM: phosphoglucosamine mutase 4 458 9.3E-163 T 22-04-2016 IPR024086 Phosphoglucosamine mutase, archaeal type GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 271 375 3.4E-18 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 SUPERFAMILY SSF53738 8 189 1.81E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 SUPERFAMILY SSF55957 369 461 1.96E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 173 264 2.4E-23 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS03635 a0af9ab562be9d639e23ef1c7647d48a 462 Gene3D G3DSA:3.40.120.10 183 262 2.7E-24 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PGJ_RS04500 9875fdb8725f8c637dcdb9087c42662f 213 SUPERFAMILY SSF47729 37 115 1.46E-6 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS04500 9875fdb8725f8c637dcdb9087c42662f 213 Gene3D G3DSA:4.10.520.10 37 98 4.2E-4 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS04500 9875fdb8725f8c637dcdb9087c42662f 213 TIGRFAM TIGR01201 HU_rel: putative DNA-binding protein 24 174 5.6E-21 T 22-04-2016 IPR005902 Putative DNA-binding protein, HU-related PGJ_RS01250 f531278d54bcba517aaa09aa7848f92d 302 SUPERFAMILY SSF53067 5 122 1.9E-29 T 22-04-2016 PGJ_RS01250 f531278d54bcba517aaa09aa7848f92d 302 Pfam PF02541 Ppx/GppA phosphatase family 34 293 5.1E-34 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 PGJ_RS01250 f531278d54bcba517aaa09aa7848f92d 302 PANTHER PTHR30005 6 296 4.7E-55 T 22-04-2016 PGJ_RS01250 f531278d54bcba517aaa09aa7848f92d 302 SUPERFAMILY SSF53067 134 296 3.06E-30 T 22-04-2016 PGJ_RS01250 f531278d54bcba517aaa09aa7848f92d 302 Gene3D G3DSA:3.30.420.40 2 122 2.6E-36 T 22-04-2016 PGJ_RS01250 f531278d54bcba517aaa09aa7848f92d 302 Gene3D G3DSA:3.30.420.150 134 298 1.9E-25 T 22-04-2016 PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 5 179 20.214 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 PANTHER PTHR30265 1 178 2.4E-52 T 22-04-2016 PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 178 2.4E-48 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 SUPERFAMILY SSF82679 5 113 1.57E-28 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 SMART SM00739 125 152 4.2E-4 T 22-04-2016 IPR005824 KOW PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 Pfam PF00467 KOW motif 128 159 5.4E-6 T 22-04-2016 IPR005824 KOW PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 SUPERFAMILY SSF50104 123 178 3.26E-16 T 22-04-2016 IPR008991 Translation protein SH3-like domain PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 Gene3D G3DSA:3.30.70.940 5 113 1.3E-31 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 SMART SM00738 5 112 1.0E-26 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 Gene3D G3DSA:2.30.30.30 119 178 6.3E-25 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 Pfam PF02357 Transcription termination factor nusG 6 109 7.2E-19 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 PRINTS PR00338 Transcription termination factor NUSG signature 155 171 3.5E-14 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 PRINTS PR00338 Transcription termination factor NUSG signature 137 152 3.5E-14 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PGJ_RS07045 9fa61854a029493bcdff9a8912ce38a8 179 PRINTS PR00338 Transcription termination factor NUSG signature 60 72 3.5E-14 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 SUPERFAMILY SSF51735 2 190 3.03E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 Gene3D G3DSA:1.20.5.100 196 226 1.1E-4 T 22-04-2016 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 3 389 1.3E-109 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 311 400 1.6E-13 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 PANTHER PTHR11374:SF4 1 395 1.1E-149 T 22-04-2016 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 SUPERFAMILY SSF48179 196 284 5.95E-25 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 196 283 4.1E-23 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 PIRSF PIRSF500136 1 402 2.0E-145 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 PIRSF PIRSF000124 1 401 1.9E-67 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 178 2.9E-50 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 Gene3D G3DSA:3.40.50.720 227 400 3.7E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 SMART SM00984 311 402 1.9E-17 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 PANTHER PTHR11374 1 395 1.1E-149 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 SUPERFAMILY SSF52413 309 400 2.22E-18 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PGJ_RS00495 35b8683290704a73af6f85639f90e978 402 Gene3D G3DSA:3.40.50.720 2 189 5.1E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 Gene3D G3DSA:1.10.287.130 420 478 8.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 PANTHER PTHR24423 367 383 7.4E-103 T 22-04-2016 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 PANTHER PTHR24423 422 855 7.4E-103 T 22-04-2016 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 Gene3D G3DSA:1.10.10.60 902 949 1.1E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SUPERFAMILY SSF47384 420 493 4.32E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SUPERFAMILY SSF48452 72 181 7.59E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SMART SM00342 864 947 1.0E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SUPERFAMILY SSF52172 696 837 8.4E-37 T 22-04-2016 IPR011006 CheY-like superfamily PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 Gene3D G3DSA:1.25.40.10 154 335 2.3E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 Gene3D G3DSA:1.25.40.10 52 149 4.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 Gene3D G3DSA:1.10.10.60 859 901 4.9E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 Pfam PF00512 His Kinase A (phospho-acceptor) domain 427 493 1.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SUPERFAMILY SSF48452 154 338 3.36E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 Gene3D G3DSA:3.40.50.2300 692 822 1.2E-38 T 22-04-2016 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 Pfam PF12833 Helix-turn-helix domain 870 948 1.4E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 543 650 1.4E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 Pfam PF13424 Tetratricopeptide repeat 153 221 3.7E-9 T 22-04-2016 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SMART SM00028 153 186 23.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SMART SM00028 193 226 0.83 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SMART SM00028 233 266 70.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SMART SM00028 107 140 2.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 606 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 648 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 592 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 629 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 Pfam PF00072 Response regulator receiver domain 699 809 5.6E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SUPERFAMILY SSF55874 482 649 1.24E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SMART SM00387 539 651 3.2E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SUPERFAMILY SSF46689 901 950 2.28E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SMART SM00448 697 809 1.1E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 SMART SM00388 426 493 1.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 901 943 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PGJ_RS07790 48ee54fdff5672889b6bff2daa5d2f0e 961 Gene3D G3DSA:3.30.565.10 479 652 9.7E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS08135 6bd6777ee8f5bc5665b1d2f07ea82548 336 Pfam PF13632 Glycosyl transferase family group 2 164 279 1.2E-9 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PGJ_RS08135 6bd6777ee8f5bc5665b1d2f07ea82548 336 Pfam PF00535 Glycosyl transferase family 2 9 143 1.0E-25 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PGJ_RS08135 6bd6777ee8f5bc5665b1d2f07ea82548 336 PANTHER PTHR22916 8 259 3.9E-73 T 22-04-2016 PGJ_RS08135 6bd6777ee8f5bc5665b1d2f07ea82548 336 Gene3D G3DSA:3.90.550.10 8 215 2.5E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS08135 6bd6777ee8f5bc5665b1d2f07ea82548 336 SUPERFAMILY SSF53448 7 266 2.91E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS08135 6bd6777ee8f5bc5665b1d2f07ea82548 336 PANTHER PTHR22916:SF30 8 259 3.9E-73 T 22-04-2016 PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 409 1.6E-115 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 180 3.9E-34 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 Gene3D G3DSA:3.40.50.720 233 414 9.0E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 SUPERFAMILY SSF51735 5 189 1.5E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 PIRSF PIRSF500136 1 421 9.3E-148 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 PANTHER PTHR11374:SF25 1 414 3.2E-207 T 22-04-2016 PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 SMART SM00984 317 414 5.3E-26 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 PANTHER PTHR11374 1 414 3.2E-207 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 202 290 7.8E-24 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 SUPERFAMILY SSF52413 302 413 2.88E-25 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 PIRSF PIRSF000124 4 419 1.6E-56 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 SUPERFAMILY SSF48179 201 292 4.25E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 412 1.3E-17 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PGJ_RS02860 6d407ddd2741eeeee5d33bb34b17f32c 421 Gene3D G3DSA:3.40.50.720 2 222 5.8E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS08305 d74ce53bf1cb585bcb1a8df480286342 172 PANTHER PTHR13718 15 167 4.5E-64 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08305 d74ce53bf1cb585bcb1a8df480286342 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 33 65 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site PGJ_RS08305 d74ce53bf1cb585bcb1a8df480286342 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 168 33.234 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PGJ_RS08305 d74ce53bf1cb585bcb1a8df480286342 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 162 4.3E-27 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 PGJ_RS08305 d74ce53bf1cb585bcb1a8df480286342 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 16 80 6.4E-27 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 PGJ_RS08305 d74ce53bf1cb585bcb1a8df480286342 172 SUPERFAMILY SSF54211 84 163 4.3E-24 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS08305 d74ce53bf1cb585bcb1a8df480286342 172 Gene3D G3DSA:3.30.160.20 15 78 4.0E-28 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain PGJ_RS08305 d74ce53bf1cb585bcb1a8df480286342 172 SUPERFAMILY SSF54768 14 81 2.93E-21 T 22-04-2016 PGJ_RS08305 d74ce53bf1cb585bcb1a8df480286342 172 Gene3D G3DSA:3.30.230.10 81 163 2.1E-30 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS08305 d74ce53bf1cb585bcb1a8df480286342 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 15 167 5.8E-61 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PGJ_RS01215 afbe9a1abd9238f6cda40d4fee4ba2d7 442 Pfam PF00571 CBS domain 225 273 4.5E-4 T 22-04-2016 IPR000644 CBS domain PGJ_RS01215 afbe9a1abd9238f6cda40d4fee4ba2d7 442 Pfam PF00571 CBS domain 292 338 3.6E-6 T 22-04-2016 IPR000644 CBS domain PGJ_RS01215 afbe9a1abd9238f6cda40d4fee4ba2d7 442 Gene3D G3DSA:3.30.465.10 348 434 3.3E-24 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PGJ_RS01215 afbe9a1abd9238f6cda40d4fee4ba2d7 442 Pfam PF03471 Transporter associated domain 354 432 1.5E-17 T 22-04-2016 IPR005170 Transporter-associated domain PGJ_RS01215 afbe9a1abd9238f6cda40d4fee4ba2d7 442 SUPERFAMILY SSF56176 353 434 1.99E-19 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PGJ_RS01215 afbe9a1abd9238f6cda40d4fee4ba2d7 442 SUPERFAMILY SSF54631 215 352 4.55E-30 T 22-04-2016 PGJ_RS01215 afbe9a1abd9238f6cda40d4fee4ba2d7 442 Gene3D G3DSA:3.10.580.10 204 347 2.3E-19 T 22-04-2016 PGJ_RS01215 afbe9a1abd9238f6cda40d4fee4ba2d7 442 TIGRFAM TIGR03520 GldE: gliding motility-associated protein GldE 31 432 1.2E-143 T 22-04-2016 IPR019862 Gliding motility-associated protein GldE PGJ_RS01215 afbe9a1abd9238f6cda40d4fee4ba2d7 442 SMART SM01091 353 436 1.1E-21 T 22-04-2016 IPR005170 Transporter-associated domain PGJ_RS01215 afbe9a1abd9238f6cda40d4fee4ba2d7 442 Pfam PF01595 Domain of unknown function DUF21 28 206 7.9E-42 T 22-04-2016 IPR002550 Domain of unknown function DUF21 PGJ_RS01215 afbe9a1abd9238f6cda40d4fee4ba2d7 442 PANTHER PTHR22777 3 436 1.8E-120 T 22-04-2016 PGJ_RS06795 7c30ecd5b70651b2e0fb463fbd5ad91a 821 Gene3D G3DSA:3.40.50.300 602 776 1.0E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06795 7c30ecd5b70651b2e0fb463fbd5ad91a 821 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 581 784 3.8E-36 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 PGJ_RS06795 7c30ecd5b70651b2e0fb463fbd5ad91a 821 Pfam PF02706 Chain length determinant protein 28 268 1.7E-12 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 PGJ_RS06795 7c30ecd5b70651b2e0fb463fbd5ad91a 821 PANTHER PTHR32309:SF13 203 797 7.4E-153 T 22-04-2016 PGJ_RS06795 7c30ecd5b70651b2e0fb463fbd5ad91a 821 PANTHER PTHR32309:SF13 3 137 7.4E-153 T 22-04-2016 PGJ_RS06795 7c30ecd5b70651b2e0fb463fbd5ad91a 821 Pfam PF13807 G-rich domain on putative tyrosine kinase 452 531 2.1E-12 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain PGJ_RS06795 7c30ecd5b70651b2e0fb463fbd5ad91a 821 SUPERFAMILY SSF52540 602 780 1.41E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06795 7c30ecd5b70651b2e0fb463fbd5ad91a 821 Pfam PF13614 AAA domain 601 726 2.9E-11 T 22-04-2016 IPR025669 AAA domain PGJ_RS06795 7c30ecd5b70651b2e0fb463fbd5ad91a 821 PANTHER PTHR32309 203 797 7.4E-153 T 22-04-2016 PGJ_RS06795 7c30ecd5b70651b2e0fb463fbd5ad91a 821 PANTHER PTHR32309 3 137 7.4E-153 T 22-04-2016 PGJ_RS05240 acfea2af9d2931702015ea0ad43ce044 183 SUPERFAMILY SSF55469 4 183 8.25E-57 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PGJ_RS05240 acfea2af9d2931702015ea0ad43ce044 183 Pfam PF00881 Nitroreductase family 75 161 2.0E-15 T 22-04-2016 IPR029479 Nitroreductase PGJ_RS05240 acfea2af9d2931702015ea0ad43ce044 183 Pfam PF00881 Nitroreductase family 10 70 4.1E-19 T 22-04-2016 IPR029479 Nitroreductase PGJ_RS05240 acfea2af9d2931702015ea0ad43ce044 183 PANTHER PTHR23026 1 183 6.8E-49 T 22-04-2016 PGJ_RS05240 acfea2af9d2931702015ea0ad43ce044 183 PANTHER PTHR23026:SF90 1 183 6.8E-49 T 22-04-2016 PGJ_RS05240 acfea2af9d2931702015ea0ad43ce044 183 Gene3D G3DSA:3.40.109.10 4 183 2.7E-55 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 Gene3D G3DSA:3.40.50.10380 9 160 1.5E-51 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 5.8E-24 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 PANTHER PTHR23406:SF23 372 442 7.4E-160 T 22-04-2016 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 PANTHER PTHR23406:SF23 31 355 7.4E-160 T 22-04-2016 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 PIRSF PIRSF036684 1 757 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 SMART SM00919 163 400 2.0E-131 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 SUPERFAMILY SSF51735 163 451 1.52E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 Gene3D G3DSA:3.40.50.10750 565 727 1.3E-38 T 22-04-2016 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 SUPERFAMILY SSF53659 430 753 1.69E-66 T 22-04-2016 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 PANTHER PTHR23406 372 442 7.4E-160 T 22-04-2016 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 PANTHER PTHR23406 31 355 7.4E-160 T 22-04-2016 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 Gene3D G3DSA:3.40.50.720 161 419 2.2E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 SUPERFAMILY SSF53223 11 161 2.09E-52 T 22-04-2016 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 Pfam PF00390 Malic enzyme, N-terminal domain 20 151 5.9E-27 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 6.2E-66 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PGJ_RS07525 91411d3e98fe3864f75573be3236b81c 759 SMART SM01274 18 151 2.1E-78 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PGJ_RS04950 249f0a1bc47e4c429753213fd12a8b33 519 PANTHER PTHR10617 456 518 1.5E-146 T 22-04-2016 PGJ_RS04950 249f0a1bc47e4c429753213fd12a8b33 519 PANTHER PTHR10617 61 374 1.5E-146 T 22-04-2016 PGJ_RS04950 249f0a1bc47e4c429753213fd12a8b33 519 SUPERFAMILY SSF51905 457 515 9.36E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS04950 249f0a1bc47e4c429753213fd12a8b33 519 SUPERFAMILY SSF51905 85 280 9.36E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS04950 249f0a1bc47e4c429753213fd12a8b33 519 PIRSF PIRSF038984 3 519 5.2E-192 T 22-04-2016 IPR028348 FAD dependent protein PGJ_RS04950 249f0a1bc47e4c429753213fd12a8b33 519 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 243 252 6.5E-7 T 22-04-2016 PGJ_RS04950 249f0a1bc47e4c429753213fd12a8b33 519 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 85 107 6.5E-7 T 22-04-2016 PGJ_RS04950 249f0a1bc47e4c429753213fd12a8b33 519 Gene3D G3DSA:3.50.50.60 84 279 1.6E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS04950 249f0a1bc47e4c429753213fd12a8b33 519 Gene3D G3DSA:3.50.50.60 464 515 1.6E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS04950 249f0a1bc47e4c429753213fd12a8b33 519 PANTHER PTHR10617:SF52 456 518 1.5E-146 T 22-04-2016 PGJ_RS04950 249f0a1bc47e4c429753213fd12a8b33 519 PANTHER PTHR10617:SF52 61 374 1.5E-146 T 22-04-2016 PGJ_RS04950 249f0a1bc47e4c429753213fd12a8b33 519 Pfam PF01494 FAD binding domain 83 117 1.4E-5 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 PGJ_RS03620 1afbdf0adb1490fdcf0c0d4cc3ab51ca 245 Pfam PF00072 Response regulator receiver domain 7 116 3.6E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS03620 1afbdf0adb1490fdcf0c0d4cc3ab51ca 245 SUPERFAMILY SSF52172 3 135 3.13E-36 T 22-04-2016 IPR011006 CheY-like superfamily PGJ_RS03620 1afbdf0adb1490fdcf0c0d4cc3ab51ca 245 PANTHER PTHR26402 5 236 2.5E-75 T 22-04-2016 PGJ_RS03620 1afbdf0adb1490fdcf0c0d4cc3ab51ca 245 SUPERFAMILY SSF46894 134 228 1.16E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PGJ_RS03620 1afbdf0adb1490fdcf0c0d4cc3ab51ca 245 PANTHER PTHR26402:SF606 5 236 2.5E-75 T 22-04-2016 PGJ_RS03620 1afbdf0adb1490fdcf0c0d4cc3ab51ca 245 SMART SM00862 152 226 2.7E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PGJ_RS03620 1afbdf0adb1490fdcf0c0d4cc3ab51ca 245 Gene3D G3DSA:3.40.50.2300 3 127 5.6E-37 T 22-04-2016 PGJ_RS03620 1afbdf0adb1490fdcf0c0d4cc3ab51ca 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 5.1E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PGJ_RS03620 1afbdf0adb1490fdcf0c0d4cc3ab51ca 245 Gene3D G3DSA:1.10.10.10 134 228 4.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS03620 1afbdf0adb1490fdcf0c0d4cc3ab51ca 245 SMART SM00448 5 116 3.5E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS06735 134ce78fc1a5e65f8a1930c63e73538f 417 Pfam PF01595 Domain of unknown function DUF21 6 156 7.2E-33 T 22-04-2016 IPR002550 Domain of unknown function DUF21 PGJ_RS06735 134ce78fc1a5e65f8a1930c63e73538f 417 SMART SM01091 335 414 4.1E-26 T 22-04-2016 IPR005170 Transporter-associated domain PGJ_RS06735 134ce78fc1a5e65f8a1930c63e73538f 417 Pfam PF00571 CBS domain 274 319 1.7E-4 T 22-04-2016 IPR000644 CBS domain PGJ_RS06735 134ce78fc1a5e65f8a1930c63e73538f 417 Gene3D G3DSA:3.30.465.10 328 413 3.6E-22 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PGJ_RS06735 134ce78fc1a5e65f8a1930c63e73538f 417 Gene3D G3DSA:3.10.580.10 194 327 7.6E-9 T 22-04-2016 PGJ_RS06735 134ce78fc1a5e65f8a1930c63e73538f 417 SUPERFAMILY SSF54631 195 323 1.95E-20 T 22-04-2016 PGJ_RS06735 134ce78fc1a5e65f8a1930c63e73538f 417 Pfam PF03471 Transporter associated domain 336 412 5.3E-20 T 22-04-2016 IPR005170 Transporter-associated domain PGJ_RS06735 134ce78fc1a5e65f8a1930c63e73538f 417 SUPERFAMILY SSF56176 335 413 9.54E-20 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PGJ_RS06735 134ce78fc1a5e65f8a1930c63e73538f 417 PANTHER PTHR22777 1 414 4.4E-100 T 22-04-2016 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PIRSF PIRSF000238 1 515 3.5E-226 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 SUPERFAMILY SSF52833 1 98 8.83E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 342 362 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 514 2.2E-241 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PANTHER PTHR22912 199 513 4.6E-158 T 22-04-2016 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 501 1.2E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 Gene3D G3DSA:3.50.50.60 441 511 1.4E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 Pfam PF13192 Thioredoxin domain 121 184 7.8E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PANTHER PTHR22912:SF107 199 513 4.6E-158 T 22-04-2016 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 SUPERFAMILY SSF51905 202 509 5.19E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 Gene3D G3DSA:3.40.30.10 1 92 3.1E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 441 462 6.8E-59 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 335 347 6.8E-59 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 402 418 6.8E-59 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 475 493 6.8E-59 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 6.8E-59 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 313 321 6.8E-59 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 6.8E-59 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 350 374 6.8E-59 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 6.8E-59 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 312 330 3.6E-35 T 22-04-2016 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 354 372 3.6E-35 T 22-04-2016 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 465 487 3.6E-35 T 22-04-2016 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 439 455 3.6E-35 T 22-04-2016 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 3.6E-35 T 22-04-2016 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 Gene3D G3DSA:3.50.50.60 338 440 2.4E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 Gene3D G3DSA:3.50.50.60 213 337 2.1E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 Gene3D G3DSA:3.40.30.10 104 195 1.1E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS06000 6de4a9f82defe8a584ff7266a7c051b2 515 SUPERFAMILY SSF52833 105 195 5.53E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS01550 a31be765c6be7e0ff28fc4817602254c 715 Gene3D G3DSA:3.40.50.280 553 712 1.4E-70 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PGJ_RS01550 a31be765c6be7e0ff28fc4817602254c 715 PANTHER PTHR23408 19 693 0.0 T 22-04-2016 PGJ_RS01550 a31be765c6be7e0ff28fc4817602254c 715 Pfam PF01642 Methylmalonyl-CoA mutase 34 547 6.1E-231 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 PGJ_RS01550 a31be765c6be7e0ff28fc4817602254c 715 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 376 401 - T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 PGJ_RS01550 a31be765c6be7e0ff28fc4817602254c 715 Pfam PF02310 B12 binding domain 589 699 1.2E-12 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PGJ_RS01550 a31be765c6be7e0ff28fc4817602254c 715 SUPERFAMILY SSF51703 27 549 7.06E-215 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 PGJ_RS01550 a31be765c6be7e0ff28fc4817602254c 715 Gene3D G3DSA:3.20.20.240 33 549 4.5E-247 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 PGJ_RS01550 a31be765c6be7e0ff28fc4817602254c 715 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 586 710 3.7E-60 T 22-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 PGJ_RS01550 a31be765c6be7e0ff28fc4817602254c 715 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 33 554 1.9E-263 T 22-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 PGJ_RS01550 a31be765c6be7e0ff28fc4817602254c 715 SUPERFAMILY SSF52242 553 714 2.35E-57 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PGJ_RS01550 a31be765c6be7e0ff28fc4817602254c 715 PANTHER PTHR23408:SF1 19 693 0.0 T 22-04-2016 PGJ_RS01085 1e89112da5cadfdd8092a2f4be387131 222 SMART SM00987 50 212 7.0E-35 T 22-04-2016 PGJ_RS01085 1e89112da5cadfdd8092a2f4be387131 222 Gene3D G3DSA:3.40.470.10 6 222 3.1E-93 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PGJ_RS01085 1e89112da5cadfdd8092a2f4be387131 222 SUPERFAMILY SSF52141 5 222 1.57E-89 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PGJ_RS01085 1e89112da5cadfdd8092a2f4be387131 222 SMART SM00986 50 212 7.0E-35 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PGJ_RS01085 1e89112da5cadfdd8092a2f4be387131 222 Pfam PF03167 Uracil DNA glycosylase superfamily 56 211 5.2E-22 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PGJ_RS01085 1e89112da5cadfdd8092a2f4be387131 222 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 9 215 8.4E-82 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 PGJ_RS01085 1e89112da5cadfdd8092a2f4be387131 222 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 7 222 37.96 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 PGJ_RS01085 1e89112da5cadfdd8092a2f4be387131 222 PANTHER PTHR11264 1 222 1.3E-123 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 PGJ_RS01085 1e89112da5cadfdd8092a2f4be387131 222 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 59 68 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 209 342 3.3E-63 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 Pfam PF01625 Peptide methionine sulfoxide reductase 38 188 2.9E-65 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 SUPERFAMILY SSF55068 28 189 1.03E-69 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 Gene3D G3DSA:2.170.150.20 204 348 8.8E-61 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 Gene3D G3DSA:3.30.1060.10 29 188 1.6E-72 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 36 193 37.688 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 PANTHER PTHR10173:SF31 312 352 2.8E-90 T 22-04-2016 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 PANTHER PTHR10173:SF31 35 181 2.8E-90 T 22-04-2016 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 Pfam PF01641 SelR domain 213 333 9.3E-47 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 PANTHER PTHR10173 312 352 2.8E-90 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 PANTHER PTHR10173 35 181 2.8E-90 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 37 187 5.8E-63 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 207 334 36.253 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PGJ_RS09360 f69d5d5ec120c30db47ae8a6767584a8 352 SUPERFAMILY SSF51316 207 347 9.42E-59 T 22-04-2016 IPR011057 Mss4-like PGJ_RS00295 b3c8a4faa730052da760eab593336bb0 263 SUPERFAMILY SSF51161 4 259 3.17E-70 T 22-04-2016 IPR011004 Trimeric LpxA-like PGJ_RS00295 b3c8a4faa730052da760eab593336bb0 263 Gene3D G3DSA:2.160.10.10 3 185 3.8E-43 T 22-04-2016 PGJ_RS00295 b3c8a4faa730052da760eab593336bb0 263 Gene3D G3DSA:1.20.1180.10 194 259 1.4E-21 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PGJ_RS00295 b3c8a4faa730052da760eab593336bb0 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 177 258 7.8E-25 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PGJ_RS00295 b3c8a4faa730052da760eab593336bb0 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 6 258 3.3E-104 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PGJ_RS00295 b3c8a4faa730052da760eab593336bb0 263 PANTHER PTHR23416 5 251 2.0E-96 T 22-04-2016 PGJ_RS00295 b3c8a4faa730052da760eab593336bb0 263 PANTHER PTHR23416:SF8 5 251 2.0E-96 T 22-04-2016 PGJ_RS00295 b3c8a4faa730052da760eab593336bb0 263 PIRSF PIRSF000456 2 263 1.5E-100 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PGJ_RS00295 b3c8a4faa730052da760eab593336bb0 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 49 1.0E-7 T 22-04-2016 IPR001451 Hexapeptide repeat PGJ_RS00295 b3c8a4faa730052da760eab593336bb0 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 138 5.3E-7 T 22-04-2016 IPR001451 Hexapeptide repeat PGJ_RS08390 2ff98b2d7c3c3bbc31f591c557fe5555 205 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 205 37.709 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08390 2ff98b2d7c3c3bbc31f591c557fe5555 205 Gene3D G3DSA:4.10.960.10 76 157 3.7E-28 T 22-04-2016 PGJ_RS08390 2ff98b2d7c3c3bbc31f591c557fe5555 205 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site PGJ_RS08390 2ff98b2d7c3c3bbc31f591c557fe5555 205 Gene3D G3DSA:2.40.30.10 3 32 2.3E-9 T 22-04-2016 PGJ_RS08390 2ff98b2d7c3c3bbc31f591c557fe5555 205 Gene3D G3DSA:2.40.30.10 158 203 2.3E-9 T 22-04-2016 PGJ_RS08390 2ff98b2d7c3c3bbc31f591c557fe5555 205 Pfam PF00297 Ribosomal protein L3 94 180 2.5E-16 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08390 2ff98b2d7c3c3bbc31f591c557fe5555 205 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 203 3.6E-85 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08390 2ff98b2d7c3c3bbc31f591c557fe5555 205 PANTHER PTHR11229 1 203 1.1E-106 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08390 2ff98b2d7c3c3bbc31f591c557fe5555 205 SUPERFAMILY SSF50447 2 204 4.41E-77 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 Gene3D G3DSA:3.30.70.360 209 318 9.3E-44 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 PANTHER PTHR11014:SF3 2 91 1.9E-177 T 22-04-2016 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 PANTHER PTHR11014:SF3 130 405 1.9E-177 T 22-04-2016 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 404 1.1E-170 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 PANTHER PTHR11014 2 91 1.9E-177 T 22-04-2016 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 PANTHER PTHR11014 130 405 1.9E-177 T 22-04-2016 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 137 176 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 Hamap MF_00550 Peptidase T [pepT]. 1 403 54.212 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 Pfam PF07687 Peptidase dimerisation domain 205 306 4.8E-12 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 SUPERFAMILY SSF53187 2 209 9.81E-76 T 22-04-2016 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 SUPERFAMILY SSF53187 321 404 9.81E-76 T 22-04-2016 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 Gene3D G3DSA:3.40.630.10 321 405 1.9E-115 T 22-04-2016 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 Gene3D G3DSA:3.40.630.10 1 208 1.9E-115 T 22-04-2016 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 PIRSF PIRSF037215 1 405 2.9E-189 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 Pfam PF01546 Peptidase family M20/M25/M40 138 400 7.5E-12 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PGJ_RS06765 bb8cdc49b9e50883eccda6ee19c85a66 405 SUPERFAMILY SSF55031 208 319 8.89E-37 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PGJ_RS09840 f2265090b46621fe206643985f20faac 446 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 439 4.3E-86 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PGJ_RS09840 f2265090b46621fe206643985f20faac 446 Pfam PF00696 Amino acid kinase family 2 278 1.4E-38 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PGJ_RS09840 f2265090b46621fe206643985f20faac 446 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PGJ_RS09840 f2265090b46621fe206643985f20faac 446 PANTHER PTHR21499 3 444 1.1E-114 T 22-04-2016 PGJ_RS09840 f2265090b46621fe206643985f20faac 446 Gene3D G3DSA:3.40.1160.10 2 47 1.0E-56 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PGJ_RS09840 f2265090b46621fe206643985f20faac 446 Gene3D G3DSA:3.40.1160.10 105 294 1.0E-56 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PGJ_RS09840 f2265090b46621fe206643985f20faac 446 SUPERFAMILY SSF55021 296 385 1.6E-14 T 22-04-2016 PGJ_RS09840 f2265090b46621fe206643985f20faac 446 SUPERFAMILY SSF53633 2 290 1.44E-64 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PGJ_RS09840 f2265090b46621fe206643985f20faac 446 SUPERFAMILY SSF55021 379 439 2.29E-11 T 22-04-2016 PGJ_RS09840 f2265090b46621fe206643985f20faac 446 PANTHER PTHR21499:SF3 3 444 1.1E-114 T 22-04-2016 PGJ_RS09840 f2265090b46621fe206643985f20faac 446 PIRSF PIRSF000726 1 446 2.9E-86 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PGJ_RS03330 9a171228d4d43c301bf0246782d2b95c 418 Pfam PF00589 Phage integrase family 243 398 3.2E-20 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS03330 9a171228d4d43c301bf0246782d2b95c 418 Pfam PF13102 Phage integrase SAM-like domain 11 185 2.6E-23 T 22-04-2016 IPR025269 Phage integrase SAM-like domain PGJ_RS03330 9a171228d4d43c301bf0246782d2b95c 418 PANTHER PTHR30349:SF22 50 411 1.1E-103 T 22-04-2016 PGJ_RS03330 9a171228d4d43c301bf0246782d2b95c 418 Gene3D G3DSA:1.10.443.10 239 409 2.3E-35 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS03330 9a171228d4d43c301bf0246782d2b95c 418 SUPERFAMILY SSF56349 138 407 4.91E-51 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS03330 9a171228d4d43c301bf0246782d2b95c 418 PANTHER PTHR30349 50 411 1.1E-103 T 22-04-2016 PGJ_RS09905 7fe4a24ef9079055097a94d792a8f454 314 PANTHER PTHR21708 2 308 9.8E-46 T 22-04-2016 PGJ_RS09905 7fe4a24ef9079055097a94d792a8f454 314 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 190 307 6.2E-18 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PGJ_RS09905 7fe4a24ef9079055097a94d792a8f454 314 Gene3D G3DSA:1.10.1040.10 190 308 2.1E-32 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PGJ_RS09905 7fe4a24ef9079055097a94d792a8f454 314 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 7 312 5.9E-83 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PGJ_RS09905 7fe4a24ef9079055097a94d792a8f454 314 SUPERFAMILY SSF48179 190 308 3.4E-22 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PGJ_RS09905 7fe4a24ef9079055097a94d792a8f454 314 Pfam PF02558 Ketopantoate reductase PanE/ApbA 8 161 6.9E-32 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PGJ_RS09905 7fe4a24ef9079055097a94d792a8f454 314 SUPERFAMILY SSF51735 7 133 3.18E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09905 7fe4a24ef9079055097a94d792a8f454 314 PANTHER PTHR21708:SF26 2 308 9.8E-46 T 22-04-2016 PGJ_RS09905 7fe4a24ef9079055097a94d792a8f454 314 Gene3D G3DSA:3.40.50.720 4 185 7.1E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09090 1ad1094e6bf99286fddd1c88c7936f02 225 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 225 95.819 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PGJ_RS09090 1ad1094e6bf99286fddd1c88c7936f02 225 PANTHER PTHR32125:SF1 1 225 1.2E-98 T 22-04-2016 PGJ_RS09090 1ad1094e6bf99286fddd1c88c7936f02 225 Gene3D G3DSA:3.40.1280.10 1 159 1.7E-64 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PGJ_RS09090 1ad1094e6bf99286fddd1c88c7936f02 225 SUPERFAMILY SSF75217 1 224 1.37E-90 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PGJ_RS09090 1ad1094e6bf99286fddd1c88c7936f02 225 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 224 2.9E-83 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PGJ_RS09090 1ad1094e6bf99286fddd1c88c7936f02 225 PIRSF PIRSF000386 1 225 9.1E-100 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PGJ_RS09090 1ad1094e6bf99286fddd1c88c7936f02 225 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 220 2.7E-58 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PGJ_RS09090 1ad1094e6bf99286fddd1c88c7936f02 225 Gene3D G3DSA:1.10.1270.20 170 224 2.8E-25 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PGJ_RS09090 1ad1094e6bf99286fddd1c88c7936f02 225 PANTHER PTHR32125 1 225 1.2E-98 T 22-04-2016 PGJ_RS09085 8b0dea3cb2ee3043e05fd6edae1d3cb0 263 Gene3D G3DSA:2.40.30.10 2 91 4.0E-22 T 22-04-2016 PGJ_RS09085 8b0dea3cb2ee3043e05fd6edae1d3cb0 263 Gene3D G3DSA:3.40.50.80 94 209 6.0E-34 T 22-04-2016 PGJ_RS09085 8b0dea3cb2ee3043e05fd6edae1d3cb0 263 Gene3D G3DSA:2.10.240.10 217 248 2.4E-6 T 22-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 PGJ_RS09085 8b0dea3cb2ee3043e05fd6edae1d3cb0 263 PANTHER PTHR11938:SF47 54 263 3.9E-52 T 22-04-2016 PGJ_RS09085 8b0dea3cb2ee3043e05fd6edae1d3cb0 263 PANTHER PTHR11938 54 263 3.9E-52 T 22-04-2016 PGJ_RS09085 8b0dea3cb2ee3043e05fd6edae1d3cb0 263 SUPERFAMILY SSF52343 88 247 1.31E-29 T 22-04-2016 PGJ_RS09085 8b0dea3cb2ee3043e05fd6edae1d3cb0 263 Pfam PF00970 Oxidoreductase FAD-binding domain 3 92 2.3E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain PGJ_RS09085 8b0dea3cb2ee3043e05fd6edae1d3cb0 263 PIRSF PIRSF006816 1 254 7.9E-65 T 22-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 PGJ_RS09085 8b0dea3cb2ee3043e05fd6edae1d3cb0 263 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 211 248 5.0E-14 T 22-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 PGJ_RS09085 8b0dea3cb2ee3043e05fd6edae1d3cb0 263 SUPERFAMILY SSF63380 3 91 2.8E-19 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PGJ_RS08770 c38b8382a7e8ab5e44bf0cfbd65a168b 415 PANTHER PTHR13693 66 414 1.2E-112 T 22-04-2016 PGJ_RS08770 c38b8382a7e8ab5e44bf0cfbd65a168b 415 SUPERFAMILY SSF53383 65 415 8.02E-89 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS08770 c38b8382a7e8ab5e44bf0cfbd65a168b 415 Gene3D G3DSA:3.40.640.10 87 301 9.4E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS08770 c38b8382a7e8ab5e44bf0cfbd65a168b 415 Gene3D G3DSA:3.90.1150.10 302 414 3.5E-19 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS08770 c38b8382a7e8ab5e44bf0cfbd65a168b 415 Pfam PF00155 Aminotransferase class I and II 68 411 1.7E-42 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PGJ_RS08770 c38b8382a7e8ab5e44bf0cfbd65a168b 415 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 265 274 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PGJ_RS04840 e98dec0a9c903d75101ca1c2f54cae00 54 Pfam PF01381 Helix-turn-helix 11 51 3.2E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PGJ_RS04840 e98dec0a9c903d75101ca1c2f54cae00 54 Gene3D G3DSA:1.10.260.40 4 52 1.0E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS04840 e98dec0a9c903d75101ca1c2f54cae00 54 TIGRFAM TIGR03070 couple_hipB: transcriptional regulator, y4mF family 6 53 8.5E-21 T 22-04-2016 IPR017507 Transcription regulator, HipB-like PGJ_RS04840 e98dec0a9c903d75101ca1c2f54cae00 54 SUPERFAMILY SSF47413 2 52 5.63E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS02590 a78d922bb31490133883ab419a661d43 432 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 347 7.3E-8 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS02590 a78d922bb31490133883ab419a661d43 432 Gene3D G3DSA:3.30.70.270 66 152 4.6E-18 T 22-04-2016 PGJ_RS02590 a78d922bb31490133883ab419a661d43 432 SUPERFAMILY SSF56672 1 233 8.9E-66 T 22-04-2016 PGJ_RS02590 a78d922bb31490133883ab419a661d43 432 Gene3D G3DSA:1.10.150.20 166 233 1.0E-12 T 22-04-2016 PGJ_RS02590 a78d922bb31490133883ab419a661d43 432 SUPERFAMILY SSF100879 238 342 3.34E-6 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS02590 a78d922bb31490133883ab419a661d43 432 PANTHER PTHR11076 1 389 6.0E-131 T 22-04-2016 PGJ_RS02590 a78d922bb31490133883ab419a661d43 432 PANTHER PTHR11076:SF40 1 389 6.0E-131 T 22-04-2016 PGJ_RS02590 a78d922bb31490133883ab419a661d43 432 Pfam PF13438 Domain of unknown function (DUF4113) 366 414 5.1E-9 T 22-04-2016 IPR025188 Domain of unknown function DUF4113 PGJ_RS02590 a78d922bb31490133883ab419a661d43 432 Pfam PF00817 impB/mucB/samB family 5 146 1.1E-32 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS02590 a78d922bb31490133883ab419a661d43 432 Gene3D G3DSA:3.30.1490.100 240 349 4.5E-5 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 276 460 3.5E-64 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 Pfam PF09334 tRNA synthetases class I (M) 38 158 3.0E-15 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 Pfam PF08264 Anticodon-binding domain of tRNA 776 887 3.3E-15 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PANTHER PTHR11946 341 628 0.0 T 22-04-2016 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PANTHER PTHR11946 1 146 0.0 T 22-04-2016 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PANTHER PTHR11946 204 262 0.0 T 22-04-2016 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PANTHER PTHR11946 295 320 0.0 T 22-04-2016 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PANTHER PTHR11946 696 925 0.0 T 22-04-2016 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 SUPERFAMILY SSF47323 742 925 7.1E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 Gene3D G3DSA:1.10.730.10 729 861 2.0E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 SUPERFAMILY SSF52374 204 281 3.52E-116 T 22-04-2016 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 SUPERFAMILY SSF52374 475 673 3.52E-116 T 22-04-2016 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 SUPERFAMILY SSF52374 2 146 3.52E-116 T 22-04-2016 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 SUPERFAMILY SSF52374 700 748 3.52E-116 T 22-04-2016 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 700 726 6.6E-5 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 Gene3D G3DSA:3.90.740.10 279 483 1.5E-54 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 925 21.258 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 201 925 2.4E-212 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PANTHER PTHR11946:SF7 341 628 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PANTHER PTHR11946:SF7 1 146 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PANTHER PTHR11946:SF7 204 262 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PANTHER PTHR11946:SF7 295 320 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PANTHER PTHR11946:SF7 696 925 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PRINTS PR00985 Leucyl-tRNA synthetase signature 241 254 9.0E-40 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PRINTS PR00985 Leucyl-tRNA synthetase signature 542 560 9.0E-40 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PRINTS PR00985 Leucyl-tRNA synthetase signature 581 603 9.0E-40 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PRINTS PR00985 Leucyl-tRNA synthetase signature 614 624 9.0E-40 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 9.0E-40 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 PRINTS PR00985 Leucyl-tRNA synthetase signature 270 289 9.0E-40 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 SUPERFAMILY SSF50677 281 474 1.67E-45 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 Gene3D G3DSA:3.40.50.620 203 278 4.0E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 Gene3D G3DSA:3.40.50.620 699 728 4.0E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 Gene3D G3DSA:3.40.50.620 484 631 4.0E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS04960 28ff369b010f8907beac53047ce4f5ad 925 Gene3D G3DSA:3.40.50.620 1 145 4.0E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 SUPERFAMILY SSF46565 2 110 3.14E-38 T 22-04-2016 IPR001623 DnaJ domain PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 6 360 1.2E-130 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 SMART SM00271 5 63 2.5E-33 T 22-04-2016 IPR001623 DnaJ domain PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 22-04-2016 IPR018253 DnaJ domain, conserved site PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 PRINTS PR00625 DnaJ domain signature 43 63 1.4E-33 T 22-04-2016 IPR001623 DnaJ domain PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 PRINTS PR00625 DnaJ domain signature 26 41 1.4E-33 T 22-04-2016 IPR001623 DnaJ domain PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 PRINTS PR00625 DnaJ domain signature 8 26 1.4E-33 T 22-04-2016 IPR001623 DnaJ domain PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 PRINTS PR00625 DnaJ domain signature 63 82 1.4E-33 T 22-04-2016 IPR001623 DnaJ domain PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 SUPERFAMILY SSF49493 272 353 4.06E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 PANTHER PTHR24078:SF190 1 375 1.8E-144 T 22-04-2016 PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 SUPERFAMILY SSF57938 141 220 1.57E-18 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 381 36.448 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 SUPERFAMILY SSF49493 225 267 1.31E-14 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 SUPERFAMILY SSF49493 120 179 1.31E-14 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 Pfam PF00226 DnaJ domain 6 68 2.7E-29 T 22-04-2016 IPR001623 DnaJ domain PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 Gene3D G3DSA:1.10.287.110 1 99 8.0E-39 T 22-04-2016 IPR001623 DnaJ domain PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 PANTHER PTHR24078 1 375 1.8E-144 T 22-04-2016 PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 Gene3D G3DSA:2.10.230.10 148 219 2.6E-20 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 Gene3D G3DSA:2.60.260.20 269 345 5.1E-18 T 22-04-2016 PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 Gene3D G3DSA:2.60.260.20 220 265 7.0E-17 T 22-04-2016 PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 Gene3D G3DSA:2.60.260.20 115 147 7.0E-17 T 22-04-2016 PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 Pfam PF01556 DnaJ C terminal domain 128 344 6.9E-34 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal PGJ_RS07675 eeb8904c91c135fec1b2c90182ed65b1 383 Pfam PF00684 DnaJ central domain 154 218 1.3E-14 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PGJ_RS08295 0bad53e84774fec023c57fcc7241c525 148 Gene3D G3DSA:3.100.10.10 32 147 3.9E-34 T 22-04-2016 PGJ_RS08295 0bad53e84774fec023c57fcc7241c525 148 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08295 0bad53e84774fec023c57fcc7241c525 148 PANTHER PTHR12934 1 145 5.1E-63 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 PGJ_RS08295 0bad53e84774fec023c57fcc7241c525 148 SUPERFAMILY SSF52080 6 146 1.96E-45 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P PGJ_RS08295 0bad53e84774fec023c57fcc7241c525 148 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 145 1.9E-49 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 PGJ_RS08295 0bad53e84774fec023c57fcc7241c525 148 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 148 20.683 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 PGJ_RS08295 0bad53e84774fec023c57fcc7241c525 148 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 146 2.1E-36 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P PGJ_RS04325 526f215248c7af088b991d09263a53e7 771 Gene3D G3DSA:1.20.1610.10 484 621 4.5E-43 T 22-04-2016 PGJ_RS04325 526f215248c7af088b991d09263a53e7 771 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 1 770 0.0 T 22-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- PGJ_RS04325 526f215248c7af088b991d09263a53e7 771 PANTHER PTHR12143 13 236 5.4E-100 T 22-04-2016 PGJ_RS04325 526f215248c7af088b991d09263a53e7 771 PANTHER PTHR12143 258 770 5.4E-100 T 22-04-2016 PGJ_RS04325 526f215248c7af088b991d09263a53e7 771 Pfam PF07971 Glycosyl hydrolase family 92 271 767 4.8E-149 T 22-04-2016 IPR012939 Glycosyl hydrolase family 92 PGJ_RS04325 526f215248c7af088b991d09263a53e7 771 SUPERFAMILY SSF48208 316 744 1.79E-28 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PGJ_RS04325 526f215248c7af088b991d09263a53e7 771 PANTHER PTHR12143:SF22 13 236 5.4E-100 T 22-04-2016 PGJ_RS04325 526f215248c7af088b991d09263a53e7 771 PANTHER PTHR12143:SF22 258 770 5.4E-100 T 22-04-2016 PGJ_RS04325 526f215248c7af088b991d09263a53e7 771 Gene3D G3DSA:3.30.2080.10 622 770 7.7E-47 T 22-04-2016 PGJ_RS04325 526f215248c7af088b991d09263a53e7 771 Gene3D G3DSA:1.20.1050.60 389 477 9.9E-33 T 22-04-2016 PGJ_RS04325 526f215248c7af088b991d09263a53e7 771 Gene3D G3DSA:2.70.98.10 32 365 3.1E-76 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PGJ_RS00165 e0bb2181d040429e8bbb7b93a1d68202 121 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 113 2.3E-42 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS00165 e0bb2181d040429e8bbb7b93a1d68202 121 Pfam PF01245 Ribosomal protein L19 5 113 9.3E-44 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS00165 e0bb2181d040429e8bbb7b93a1d68202 121 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 114 26.619 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS00165 e0bb2181d040429e8bbb7b93a1d68202 121 PIRSF PIRSF002191 1 121 2.0E-46 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS00165 e0bb2181d040429e8bbb7b93a1d68202 121 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS00165 e0bb2181d040429e8bbb7b93a1d68202 121 PRINTS PR00061 Ribosomal protein L19 signature 4 33 3.3E-30 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS00165 e0bb2181d040429e8bbb7b93a1d68202 121 PRINTS PR00061 Ribosomal protein L19 signature 88 113 3.3E-30 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS00165 e0bb2181d040429e8bbb7b93a1d68202 121 PRINTS PR00061 Ribosomal protein L19 signature 34 63 3.3E-30 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS00165 e0bb2181d040429e8bbb7b93a1d68202 121 PANTHER PTHR15680 4 114 4.3E-37 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS00165 e0bb2181d040429e8bbb7b93a1d68202 121 SUPERFAMILY SSF50104 1 114 3.81E-40 T 22-04-2016 IPR008991 Translation protein SH3-like domain PGJ_RS04020 64ce8b7958aa1f8f2d884580b1a5990d 118 Pfam PF13411 MerR HTH family regulatory protein 11 80 7.6E-22 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PGJ_RS04020 64ce8b7958aa1f8f2d884580b1a5990d 118 PANTHER PTHR30204:SF15 3 111 7.7E-25 T 22-04-2016 PGJ_RS04020 64ce8b7958aa1f8f2d884580b1a5990d 118 SMART SM00422 11 81 1.7E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PGJ_RS04020 64ce8b7958aa1f8f2d884580b1a5990d 118 SUPERFAMILY SSF46955 11 111 1.28E-21 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS04020 64ce8b7958aa1f8f2d884580b1a5990d 118 Gene3D G3DSA:1.10.1660.10 11 112 2.6E-20 T 22-04-2016 PGJ_RS04020 64ce8b7958aa1f8f2d884580b1a5990d 118 PANTHER PTHR30204 3 111 7.7E-25 T 22-04-2016 PGJ_RS01720 f2856ff225595d9fd27e65d89b1aae3d 1324 Gene3D G3DSA:3.40.50.150 977 1073 4.0E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS01720 f2856ff225595d9fd27e65d89b1aae3d 1324 Gene3D G3DSA:3.40.50.150 807 833 4.0E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS01720 f2856ff225595d9fd27e65d89b1aae3d 1324 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 987 993 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PGJ_RS01720 f2856ff225595d9fd27e65d89b1aae3d 1324 Pfam PF07669 Eco57I restriction-modification methylase 982 1081 8.0E-31 T 22-04-2016 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 PGJ_RS01720 f2856ff225595d9fd27e65d89b1aae3d 1324 Pfam PF04851 Type III restriction enzyme, res subunit 149 316 7.5E-12 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PGJ_RS01720 f2856ff225595d9fd27e65d89b1aae3d 1324 SUPERFAMILY SSF53335 982 1114 8.03E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS01720 f2856ff225595d9fd27e65d89b1aae3d 1324 SUPERFAMILY SSF52540 139 331 4.43E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01720 f2856ff225595d9fd27e65d89b1aae3d 1324 SMART SM00487 145 343 2.2E-5 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PGJ_RS01720 f2856ff225595d9fd27e65d89b1aae3d 1324 Gene3D G3DSA:3.40.50.300 144 320 4.9E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09965 93c5252c19e81781c8b84f8a0fd2f839 361 SUPERFAMILY SSF159283 286 350 1.7E-10 T 22-04-2016 PGJ_RS09965 93c5252c19e81781c8b84f8a0fd2f839 361 SUPERFAMILY SSF53448 6 283 3.85E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS09965 93c5252c19e81781c8b84f8a0fd2f839 361 Gene3D G3DSA:3.90.550.10 4 273 1.4E-82 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS09965 93c5252c19e81781c8b84f8a0fd2f839 361 PANTHER PTHR12526:SF387 157 291 2.5E-40 T 22-04-2016 PGJ_RS09965 93c5252c19e81781c8b84f8a0fd2f839 361 Pfam PF00483 Nucleotidyl transferase 9 288 2.7E-43 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PGJ_RS09965 93c5252c19e81781c8b84f8a0fd2f839 361 PANTHER PTHR12526 157 291 2.5E-40 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 Pfam PF00702 haloacid dehalogenase-like hydrolase 345 641 8.0E-18 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 349 355 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 Gene3D G3DSA:3.40.1110.10 338 530 1.6E-44 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 Pfam PF00690 Cation transporter/ATPase, N-terminus 6 68 3.6E-16 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PANTHER PTHR24093 802 909 1.9E-281 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PANTHER PTHR24093 14 763 1.9E-281 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 Gene3D G3DSA:1.20.1110.10 597 904 4.5E-77 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 Gene3D G3DSA:1.20.1110.10 53 117 4.5E-77 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 SMART SM00831 7 73 1.3E-12 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 Pfam PF00689 Cation transporting ATPase, C-terminus 712 905 5.6E-31 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PANTHER PTHR24093:SF254 802 909 1.9E-281 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PANTHER PTHR24093:SF254 14 763 1.9E-281 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 555 1.2E-32 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 523 534 1.2E-32 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 347 361 1.2E-32 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 651 663 1.2E-32 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 171 185 1.2E-32 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 647 1.2E-32 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 SUPERFAMILY SSF81653 125 229 1.03E-22 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 Gene3D G3DSA:2.70.150.10 15 52 5.1E-29 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 Gene3D G3DSA:2.70.150.10 118 229 5.1E-29 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 SUPERFAMILY SSF56784 345 365 1.4E-49 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 SUPERFAMILY SSF56784 476 731 1.4E-49 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 SUPERFAMILY SSF81665 677 907 5.89E-97 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 SUPERFAMILY SSF81665 3 123 5.89E-97 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 SUPERFAMILY SSF81665 233 341 5.89E-97 T 22-04-2016 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 599 710 2.0E-29 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 283 380 3.5E-21 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 659 684 6.3E-11 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 479 497 6.3E-11 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 628 644 6.3E-11 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 Pfam PF00122 E1-E2 ATPase 92 338 6.3E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PGJ_RS04465 22cc7d99f3b5e2142f4104bf52e1d44c 918 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 15 781 1.8E-183 T 22-04-2016 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 SUPERFAMILY SSF46689 357 449 3.36E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 SMART SM00448 5 121 1.2E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 430 449 3.6E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 413 430 3.6E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 SMART SM00382 164 307 3.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 Gene3D G3DSA:3.40.50.300 143 316 2.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 Gene3D G3DSA:1.10.8.60 318 386 1.8E-23 T 22-04-2016 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 PANTHER PTHR32071 1 449 3.5E-174 T 22-04-2016 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 SUPERFAMILY SSF52172 5 188 1.04E-29 T 22-04-2016 IPR011006 CheY-like superfamily PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 Pfam PF00072 Response regulator receiver domain 7 121 1.3E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 Pfam PF00158 Sigma-54 interaction domain 145 311 1.3E-63 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 Pfam PF02954 Bacterial regulatory protein, Fis family 406 447 5.7E-16 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 Gene3D G3DSA:3.40.50.2300 5 131 1.1E-26 T 22-04-2016 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 PANTHER PTHR32071:SF15 1 449 3.5E-174 T 22-04-2016 PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 SUPERFAMILY SSF52540 145 385 2.32E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00065 843cf5e0110e17f8c054466825720b0f 449 Gene3D G3DSA:1.10.10.60 403 446 1.3E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS03315 cc8ebea654f33a0001658ad6b411679e 409 Pfam PF00589 Phage integrase family 268 387 4.1E-12 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS03315 cc8ebea654f33a0001658ad6b411679e 409 SUPERFAMILY SSF56349 114 394 1.06E-33 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS03315 cc8ebea654f33a0001658ad6b411679e 409 Gene3D G3DSA:1.10.443.10 224 398 1.0E-26 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS03315 cc8ebea654f33a0001658ad6b411679e 409 PANTHER PTHR30349:SF26 45 397 8.8E-50 T 22-04-2016 PGJ_RS03315 cc8ebea654f33a0001658ad6b411679e 409 Pfam PF13102 Phage integrase SAM-like domain 11 175 2.5E-22 T 22-04-2016 IPR025269 Phage integrase SAM-like domain PGJ_RS03315 cc8ebea654f33a0001658ad6b411679e 409 PANTHER PTHR30349 45 397 8.8E-50 T 22-04-2016 PGJ_RS01195 6467f60410071300bead061942ea2772 361 Gene3D G3DSA:3.40.50.620 2 205 5.0E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS01195 6467f60410071300bead061942ea2772 361 Gene3D G3DSA:2.30.30.280 207 267 6.1E-25 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 PGJ_RS01195 6467f60410071300bead061942ea2772 361 PANTHER PTHR11933 1 357 2.2E-135 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 PGJ_RS01195 6467f60410071300bead061942ea2772 361 Gene3D G3DSA:2.40.30.10 274 359 2.9E-14 T 22-04-2016 PGJ_RS01195 6467f60410071300bead061942ea2772 361 PANTHER PTHR11933:SF5 1 357 2.2E-135 T 22-04-2016 PGJ_RS01195 6467f60410071300bead061942ea2772 361 SUPERFAMILY SSF52402 2 239 1.9E-37 T 22-04-2016 PGJ_RS01195 6467f60410071300bead061942ea2772 361 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2 357 2.0E-103 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 PGJ_RS01195 6467f60410071300bead061942ea2772 361 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 358 32.096 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 PGJ_RS01195 6467f60410071300bead061942ea2772 361 Pfam PF03054 tRNA methyl transferase 2 357 3.7E-105 T 22-04-2016 PGJ_RS01810 f61ce04f4b17f446d55c1facdb6c0ee9 144 Gene3D G3DSA:2.40.50.100 74 143 5.6E-22 T 22-04-2016 PGJ_RS01810 f61ce04f4b17f446d55c1facdb6c0ee9 144 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 100 117 - T 22-04-2016 IPR001882 Biotin-binding site PGJ_RS01810 f61ce04f4b17f446d55c1facdb6c0ee9 144 SUPERFAMILY SSF51230 67 143 3.27E-20 T 22-04-2016 IPR011053 Single hybrid motif PGJ_RS01810 f61ce04f4b17f446d55c1facdb6c0ee9 144 Pfam PF00364 Biotin-requiring enzyme 78 143 1.1E-16 T 22-04-2016 IPR000089 Biotin/lipoyl attachment PGJ_RS01810 f61ce04f4b17f446d55c1facdb6c0ee9 144 PANTHER PTHR18866 4 143 2.0E-23 T 22-04-2016 PGJ_RS02650 dfefa6990049c79a028388dcf2d517bf 102 Pfam PF14114 Domain of unknown function (DUF4286) 3 98 3.4E-19 T 22-04-2016 IPR025563 Protein of unknown function DUF4286 PGJ_RS03980 e8a7dbed9aed6464ccf6ed9e53317377 455 PANTHER PTHR32479 21 454 1.0E-190 T 22-04-2016 PGJ_RS03980 e8a7dbed9aed6464ccf6ed9e53317377 455 Gene3D G3DSA:1.10.1060.10 294 384 7.1E-15 T 22-04-2016 PGJ_RS03980 e8a7dbed9aed6464ccf6ed9e53317377 455 Pfam PF13183 4Fe-4S dicluster domain 301 366 1.2E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PGJ_RS03980 e8a7dbed9aed6464ccf6ed9e53317377 455 SUPERFAMILY SSF46548 288 380 5.18E-17 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PGJ_RS03980 e8a7dbed9aed6464ccf6ed9e53317377 455 PANTHER PTHR32479:SF10 21 454 1.0E-190 T 22-04-2016 PGJ_RS03980 e8a7dbed9aed6464ccf6ed9e53317377 455 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 352 363 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PGJ_RS03980 e8a7dbed9aed6464ccf6ed9e53317377 455 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 303 314 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PGJ_RS03980 e8a7dbed9aed6464ccf6ed9e53317377 455 SUPERFAMILY SSF100950 59 84 7.11E-27 T 22-04-2016 PGJ_RS03980 e8a7dbed9aed6464ccf6ed9e53317377 455 SUPERFAMILY SSF100950 130 285 7.11E-27 T 22-04-2016 PGJ_RS03980 e8a7dbed9aed6464ccf6ed9e53317377 455 Gene3D G3DSA:3.40.50.10420 185 275 4.0E-31 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PGJ_RS03980 e8a7dbed9aed6464ccf6ed9e53317377 455 Gene3D G3DSA:3.40.50.10420 60 123 4.0E-31 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PGJ_RS03980 e8a7dbed9aed6464ccf6ed9e53317377 455 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 67 275 3.6E-40 T 22-04-2016 IPR003741 LUD domain PGJ_RS01640 e61a0396471dbfcd4f22fb46b4967694 535 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 10 535 53.839 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PGJ_RS01640 e61a0396471dbfcd4f22fb46b4967694 535 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 535 6.8E-255 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PGJ_RS01640 e61a0396471dbfcd4f22fb46b4967694 535 Pfam PF01293 Phosphoenolpyruvate carboxykinase 16 485 1.6E-205 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PGJ_RS01640 e61a0396471dbfcd4f22fb46b4967694 535 PANTHER PTHR30031:SF0 9 535 1.8E-298 T 22-04-2016 PGJ_RS01640 e61a0396471dbfcd4f22fb46b4967694 535 Gene3D G3DSA:3.90.228.20 223 285 1.9E-116 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PGJ_RS01640 e61a0396471dbfcd4f22fb46b4967694 535 Gene3D G3DSA:3.90.228.20 346 534 1.9E-116 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PGJ_RS01640 e61a0396471dbfcd4f22fb46b4967694 535 PIRSF PIRSF006294 2 535 1.4E-220 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PGJ_RS01640 e61a0396471dbfcd4f22fb46b4967694 535 PANTHER PTHR30031 9 535 1.8E-298 T 22-04-2016 PGJ_RS01640 e61a0396471dbfcd4f22fb46b4967694 535 SUPERFAMILY SSF68923 3 221 6.28E-83 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PGJ_RS01640 e61a0396471dbfcd4f22fb46b4967694 535 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 260 275 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PGJ_RS01640 e61a0396471dbfcd4f22fb46b4967694 535 SUPERFAMILY SSF53795 223 535 6.41E-123 T 22-04-2016 PGJ_RS01640 e61a0396471dbfcd4f22fb46b4967694 535 Gene3D G3DSA:3.40.449.10 16 220 7.1E-84 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PGJ_RS02535 4576876b0ef47ff5fc80cfd39ca406a7 210 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 210 28.232 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS02535 4576876b0ef47ff5fc80cfd39ca406a7 210 SUPERFAMILY SSF53271 11 208 1.31E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS02535 4576876b0ef47ff5fc80cfd39ca406a7 210 PANTHER PTHR19278 1 205 2.7E-60 T 22-04-2016 PGJ_RS02535 4576876b0ef47ff5fc80cfd39ca406a7 210 Pfam PF00156 Phosphoribosyl transferase domain 53 162 1.0E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PGJ_RS02535 4576876b0ef47ff5fc80cfd39ca406a7 210 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 12 179 1.6E-41 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS02535 4576876b0ef47ff5fc80cfd39ca406a7 210 Gene3D G3DSA:3.40.50.2020 5 208 4.8E-56 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 Pfam PF00703 Glycosyl hydrolases family 2 228 330 2.0E-11 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 SUPERFAMILY SSF49785 33 215 3.74E-51 T 22-04-2016 IPR008979 Galactose-binding domain-like PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 Gene3D G3DSA:3.20.20.80 610 680 4.5E-65 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 Gene3D G3DSA:3.20.20.80 330 572 4.5E-65 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 SUPERFAMILY SSF51445 327 677 1.73E-113 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 PANTHER PTHR10066 1 161 4.4E-208 T 22-04-2016 PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 PANTHER PTHR10066 184 860 4.4E-208 T 22-04-2016 PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 SUPERFAMILY SSF49303 231 329 1.62E-11 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 PANTHER PTHR10066:SF12 1 161 4.4E-208 T 22-04-2016 PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 PANTHER PTHR10066:SF12 184 860 4.4E-208 T 22-04-2016 PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 SUPERFAMILY SSF49303 792 852 7.91E-12 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 Gene3D G3DSA:2.60.40.320 205 329 9.3E-14 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 PGJ_RS00145 ddaadaf356927aa2262dd981692e767a 861 Gene3D G3DSA:2.60.120.260 20 204 3.1E-28 T 22-04-2016 IPR008979 Galactose-binding domain-like PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 PANTHER PTHR11361:SF86 7 885 0.0 T 22-04-2016 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 Pfam PF01624 MutS domain I 8 119 1.2E-38 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 SUPERFAMILY SSF48334 268 565 1.96E-78 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 Pfam PF00488 MutS domain V 613 802 5.2E-78 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 Pfam PF05192 MutS domain III 271 559 6.7E-35 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 SUPERFAMILY SSF55271 8 113 7.59E-38 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 8 885 4.6E-269 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 SUPERFAMILY SSF53150 114 267 3.01E-36 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 PIRSF PIRSF037677 6 843 3.1E-162 T 22-04-2016 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 PANTHER PTHR11361 7 885 0.0 T 22-04-2016 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 Gene3D G3DSA:1.10.1420.10 264 468 3.5E-47 T 22-04-2016 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 Gene3D G3DSA:3.40.1170.10 8 120 5.9E-45 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 SMART SM00533 283 591 9.2E-83 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 Gene3D G3DSA:3.30.420.110 126 256 1.7E-36 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 880 24.282 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 Pfam PF05190 MutS family domain IV 428 518 2.2E-25 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 SMART SM00534 610 799 3.8E-101 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 Pfam PF05188 MutS domain II 128 253 3.5E-19 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 691 707 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 SUPERFAMILY SSF52540 567 803 4.28E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00420 23f256fae478d5ac3b234692f504203c 891 Gene3D G3DSA:3.40.50.300 569 803 3.1E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06320 55155ab72ee93e74ab3f28b05ce32c75 206 SUPERFAMILY SSF111384 43 192 4.05E-15 T 22-04-2016 IPR024930 Skp domain PGJ_RS06320 55155ab72ee93e74ab3f28b05ce32c75 206 Gene3D G3DSA:3.30.910.20 40 80 8.9E-11 T 22-04-2016 PGJ_RS06320 55155ab72ee93e74ab3f28b05ce32c75 206 Gene3D G3DSA:3.30.910.20 117 192 8.9E-11 T 22-04-2016 PGJ_RS06320 55155ab72ee93e74ab3f28b05ce32c75 206 Pfam PF03938 Outer membrane protein (OmpH-like) 34 189 9.2E-23 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 PGJ_RS06320 55155ab72ee93e74ab3f28b05ce32c75 206 SMART SM00935 18 192 6.6E-24 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 PGJ_RS08395 2f77b094f7ca106682c1e7bd9bd5fde4 101 PRINTS PR00971 Ribosomal protein S10 family signature 39 54 4.5E-15 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08395 2f77b094f7ca106682c1e7bd9bd5fde4 101 PRINTS PR00971 Ribosomal protein S10 family signature 60 74 4.5E-15 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08395 2f77b094f7ca106682c1e7bd9bd5fde4 101 PRINTS PR00971 Ribosomal protein S10 family signature 4 17 4.5E-15 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08395 2f77b094f7ca106682c1e7bd9bd5fde4 101 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 3 101 1.2E-41 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08395 2f77b094f7ca106682c1e7bd9bd5fde4 101 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 2 101 24.227 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08395 2f77b094f7ca106682c1e7bd9bd5fde4 101 Pfam PF00338 Ribosomal protein S10p/S20e 6 100 5.4E-34 T 22-04-2016 IPR027486 Ribosomal protein S10 domain PGJ_RS08395 2f77b094f7ca106682c1e7bd9bd5fde4 101 SUPERFAMILY SSF54999 4 101 1.06E-34 T 22-04-2016 IPR027486 Ribosomal protein S10 domain PGJ_RS08395 2f77b094f7ca106682c1e7bd9bd5fde4 101 ProSitePatterns PS00361 Ribosomal protein S10 signature. 28 43 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08395 2f77b094f7ca106682c1e7bd9bd5fde4 101 PANTHER PTHR11700 1 101 3.3E-44 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08395 2f77b094f7ca106682c1e7bd9bd5fde4 101 Gene3D G3DSA:3.30.70.600 3 101 1.2E-40 T 22-04-2016 IPR027486 Ribosomal protein S10 domain PGJ_RS08395 2f77b094f7ca106682c1e7bd9bd5fde4 101 SMART SM01403 6 100 4.7E-52 T 22-04-2016 IPR027486 Ribosomal protein S10 domain PGJ_RS03285 368177b5512015445fb2a3e06fecdc15 142 Pfam PF11888 Protein of unknown function (DUF3408) 8 135 1.7E-34 T 22-04-2016 IPR021823 Protein of unknown function DUF3408 PGJ_RS00945 aa19549af5e1ee275ba9cdcfcf2a58c7 602 PANTHER PTHR35863:SF1 240 600 2.9E-75 T 22-04-2016 PGJ_RS00945 aa19549af5e1ee275ba9cdcfcf2a58c7 602 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 251 599 24.553 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PGJ_RS00945 aa19549af5e1ee275ba9cdcfcf2a58c7 602 SUPERFAMILY SSF111342 216 526 1.44E-75 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PGJ_RS00945 aa19549af5e1ee275ba9cdcfcf2a58c7 602 Gene3D G3DSA:3.30.2110.10 253 422 2.3E-51 T 22-04-2016 PGJ_RS00945 aa19549af5e1ee275ba9cdcfcf2a58c7 602 Pfam PF01888 CbiD 251 509 1.9E-80 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PGJ_RS00945 aa19549af5e1ee275ba9cdcfcf2a58c7 602 PANTHER PTHR35863 240 600 2.9E-75 T 22-04-2016 PGJ_RS00945 aa19549af5e1ee275ba9cdcfcf2a58c7 602 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 222 6.2E-51 T 22-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 PGJ_RS01030 b4a78edc5daddd328ab581b2abbb9186 308 SUPERFAMILY SSF55909 6 308 5.89E-52 T 22-04-2016 PGJ_RS01030 b4a78edc5daddd328ab581b2abbb9186 308 Gene3D G3DSA:3.75.10.10 7 308 4.0E-49 T 22-04-2016 PGJ_RS01030 b4a78edc5daddd328ab581b2abbb9186 308 PANTHER PTHR12737 58 308 2.0E-14 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PGJ_RS01030 b4a78edc5daddd328ab581b2abbb9186 308 Pfam PF02274 Amidinotransferase 55 307 1.1E-15 T 22-04-2016 PGJ_RS03690 93bb0bbc609de72e7c9d54eb6e0c5964 434 PANTHER PTHR13779:SF7 1 434 3.3E-185 T 22-04-2016 PGJ_RS03690 93bb0bbc609de72e7c9d54eb6e0c5964 434 Pfam PF16193 AAA C-terminal domain 188 255 9.4E-19 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain PGJ_RS03690 93bb0bbc609de72e7c9d54eb6e0c5964 434 Gene3D G3DSA:1.10.3710.10 336 430 1.0E-31 T 22-04-2016 PGJ_RS03690 93bb0bbc609de72e7c9d54eb6e0c5964 434 Gene3D G3DSA:3.40.50.300 2 147 4.7E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03690 93bb0bbc609de72e7c9d54eb6e0c5964 434 SUPERFAMILY SSF52540 4 224 2.59E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03690 93bb0bbc609de72e7c9d54eb6e0c5964 434 PANTHER PTHR13779 1 434 3.3E-185 T 22-04-2016 PGJ_RS03690 93bb0bbc609de72e7c9d54eb6e0c5964 434 SUPERFAMILY SSF48019 241 426 2.21E-74 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 PGJ_RS03690 93bb0bbc609de72e7c9d54eb6e0c5964 434 Gene3D G3DSA:1.10.8.60 148 216 2.6E-6 T 22-04-2016 PGJ_RS03690 93bb0bbc609de72e7c9d54eb6e0c5964 434 Gene3D G3DSA:1.20.272.10 237 335 5.9E-44 T 22-04-2016 PGJ_RS03690 93bb0bbc609de72e7c9d54eb6e0c5964 434 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 131 4.6E-17 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PGJ_RS03690 93bb0bbc609de72e7c9d54eb6e0c5964 434 Pfam PF12002 MgsA AAA+ ATPase C terminal 256 423 1.8E-70 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal PGJ_RS03690 93bb0bbc609de72e7c9d54eb6e0c5964 434 SMART SM00382 39 159 1.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS07510 99729e79af8f5c90c23bc85f871903e1 223 PANTHER PTHR24220:SF342 5 222 9.7E-118 T 22-04-2016 PGJ_RS07510 99729e79af8f5c90c23bc85f871903e1 223 SMART SM00382 32 220 7.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS07510 99729e79af8f5c90c23bc85f871903e1 223 SUPERFAMILY SSF52540 4 221 1.06E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07510 99729e79af8f5c90c23bc85f871903e1 223 Gene3D G3DSA:3.40.50.300 3 221 3.4E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07510 99729e79af8f5c90c23bc85f871903e1 223 PANTHER PTHR24220 5 222 9.7E-118 T 22-04-2016 PGJ_RS07510 99729e79af8f5c90c23bc85f871903e1 223 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS07510 99729e79af8f5c90c23bc85f871903e1 223 Pfam PF00005 ABC transporter 23 171 3.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS04860 4ce5bff480819588a636eadfa3ae5ee6 161 Pfam PF00216 Bacterial DNA-binding protein 34 120 5.2E-5 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS04860 4ce5bff480819588a636eadfa3ae5ee6 161 TIGRFAM TIGR01201 HU_rel: putative DNA-binding protein 1 161 1.8E-52 T 22-04-2016 IPR005902 Putative DNA-binding protein, HU-related PGJ_RS04860 4ce5bff480819588a636eadfa3ae5ee6 161 SUPERFAMILY SSF47729 32 123 1.0E-9 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS04860 4ce5bff480819588a636eadfa3ae5ee6 161 Gene3D G3DSA:4.10.520.10 34 122 5.6E-5 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 249 264 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 187 200 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 SMART SM00448 5 123 2.9E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 SUPERFAMILY SSF52540 162 405 8.88E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 Gene3D G3DSA:1.10.10.60 390 464 2.2E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 Pfam PF00158 Sigma-54 interaction domain 163 329 5.8E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 Pfam PF02954 Bacterial regulatory protein, Fis family 422 462 1.3E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 SUPERFAMILY SSF46689 377 464 5.38E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 PANTHER PTHR32071 1 464 9.4E-179 T 22-04-2016 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 445 464 1.3E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 445 1.3E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 SUPERFAMILY SSF52172 6 207 6.69E-35 T 22-04-2016 IPR011006 CheY-like superfamily PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 Pfam PF00072 Response regulator receiver domain 7 123 9.1E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 SMART SM00382 183 326 1.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 Gene3D G3DSA:3.40.50.300 161 335 2.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 Gene3D G3DSA:1.10.8.60 336 389 8.9E-17 T 22-04-2016 PGJ_RS05190 69f5509247a613f938d4ed6424559481 464 Gene3D G3DSA:3.40.50.2300 5 128 1.9E-26 T 22-04-2016 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 PANTHER PTHR11938:SF90 50 486 1.8E-226 T 22-04-2016 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 SUPERFAMILY SSF51971 168 420 2.65E-63 T 22-04-2016 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 Gene3D G3DSA:3.50.50.60 171 268 4.7E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 SUPERFAMILY SSF46548 23 179 2.77E-33 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 PANTHER PTHR11938 50 486 1.8E-226 T 22-04-2016 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 Gene3D G3DSA:1.10.1060.10 25 170 1.1E-41 T 22-04-2016 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 PRINTS PR00419 Adrenodoxin reductase family signature 310 324 8.6E-20 T 22-04-2016 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 PRINTS PR00419 Adrenodoxin reductase family signature 235 245 8.6E-20 T 22-04-2016 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 PRINTS PR00419 Adrenodoxin reductase family signature 193 206 8.6E-20 T 22-04-2016 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 PRINTS PR00419 Adrenodoxin reductase family signature 344 357 8.6E-20 T 22-04-2016 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 PRINTS PR00419 Adrenodoxin reductase family signature 170 192 8.6E-20 T 22-04-2016 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 45 486 7.7E-167 T 22-04-2016 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 170 473 4.7E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 49 156 2.9E-39 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 Gene3D G3DSA:3.50.50.60 410 487 1.4E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS09080 b3740bd6b080ea35e0a4b9f591d298b2 490 Gene3D G3DSA:3.50.50.60 269 409 4.9E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS10020 442eddf16a96e569db237ef8c01d6d40 740 Gene3D G3DSA:2.40.170.20 284 714 2.3E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS10020 442eddf16a96e569db237ef8c01d6d40 740 Pfam PF13715 CarboxypepD_reg-like domain 28 114 1.0E-11 T 22-04-2016 PGJ_RS10020 442eddf16a96e569db237ef8c01d6d40 740 Pfam PF00593 TonB dependent receptor 473 714 3.0E-10 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS10020 442eddf16a96e569db237ef8c01d6d40 740 SUPERFAMILY SSF49464 26 91 4.58E-8 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS10020 442eddf16a96e569db237ef8c01d6d40 740 SUPERFAMILY SSF56935 139 723 2.05E-41 T 22-04-2016 PGJ_RS10020 442eddf16a96e569db237ef8c01d6d40 740 Gene3D G3DSA:2.60.40.1120 28 113 7.6E-7 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS00315 48a671c3aafab78774a69863d4dad7db 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 6 360 38.325 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PGJ_RS00315 48a671c3aafab78774a69863d4dad7db 361 Pfam PF03462 PCRF domain 14 207 2.6E-71 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PGJ_RS00315 48a671c3aafab78774a69863d4dad7db 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 358 1.7E-147 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PGJ_RS00315 48a671c3aafab78774a69863d4dad7db 361 PANTHER PTHR11075:SF9 1 359 6.8E-165 T 22-04-2016 PGJ_RS00315 48a671c3aafab78774a69863d4dad7db 361 SMART SM00937 69 182 5.4E-58 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PGJ_RS00315 48a671c3aafab78774a69863d4dad7db 361 PANTHER PTHR11075 1 359 6.8E-165 T 22-04-2016 PGJ_RS00315 48a671c3aafab78774a69863d4dad7db 361 Gene3D G3DSA:1.20.58.410 9 97 3.2E-16 T 22-04-2016 PGJ_RS00315 48a671c3aafab78774a69863d4dad7db 361 Gene3D G3DSA:3.30.160.20 214 291 5.6E-32 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain PGJ_RS00315 48a671c3aafab78774a69863d4dad7db 361 SUPERFAMILY SSF75620 13 356 3.14E-129 T 22-04-2016 PGJ_RS00315 48a671c3aafab78774a69863d4dad7db 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 231 247 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PGJ_RS00315 48a671c3aafab78774a69863d4dad7db 361 Pfam PF00472 RF-1 domain 215 324 1.3E-40 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PGJ_RS08535 a3416cdb6c4dd56db2b7ccaf3e773c23 470 Gene3D G3DSA:1.10.3290.10 13 281 1.1E-67 T 22-04-2016 IPR003812 Fido domain PGJ_RS08535 a3416cdb6c4dd56db2b7ccaf3e773c23 470 Pfam PF02661 Fic/DOC family 102 218 4.0E-25 T 22-04-2016 IPR003812 Fido domain PGJ_RS08535 a3416cdb6c4dd56db2b7ccaf3e773c23 470 SUPERFAMILY SSF140931 78 277 1.57E-39 T 22-04-2016 IPR003812 Fido domain PGJ_RS08535 a3416cdb6c4dd56db2b7ccaf3e773c23 470 PANTHER PTHR13504:SF29 261 295 2.8E-67 T 22-04-2016 PGJ_RS08535 a3416cdb6c4dd56db2b7ccaf3e773c23 470 PANTHER PTHR13504:SF29 10 245 2.8E-67 T 22-04-2016 PGJ_RS08535 a3416cdb6c4dd56db2b7ccaf3e773c23 470 PANTHER PTHR13504 261 295 2.8E-67 T 22-04-2016 PGJ_RS08535 a3416cdb6c4dd56db2b7ccaf3e773c23 470 PANTHER PTHR13504 10 245 2.8E-67 T 22-04-2016 PGJ_RS05810 b0064743237ba3028b906d59556a72cc 173 Pfam PF08282 haloacid dehalogenase-like hydrolase 80 151 1.9E-10 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS05810 b0064743237ba3028b906d59556a72cc 173 PANTHER PTHR21485:SF3 8 167 2.9E-37 T 22-04-2016 PGJ_RS05810 b0064743237ba3028b906d59556a72cc 173 PANTHER PTHR21485 8 167 2.9E-37 T 22-04-2016 PGJ_RS05810 b0064743237ba3028b906d59556a72cc 173 SUPERFAMILY SSF56784 8 165 3.6E-37 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS05810 b0064743237ba3028b906d59556a72cc 173 PIRSF PIRSF006118 1 171 3.6E-56 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PGJ_RS05810 b0064743237ba3028b906d59556a72cc 173 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 14 162 1.7E-39 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PGJ_RS05810 b0064743237ba3028b906d59556a72cc 173 Gene3D G3DSA:3.40.50.1000 8 164 2.6E-38 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SUPERFAMILY SSF52540 369 446 9.58E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 Pfam PF13676 TIR domain 948 1043 6.0E-11 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 Pfam PF13855 Leucine rich repeat 253 308 1.6E-7 T 22-04-2016 IPR001611 Leucine-rich repeat GO:0005515 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 Pfam PF13855 Leucine rich repeat 121 176 1.3E-7 T 22-04-2016 IPR001611 Leucine-rich repeat GO:0005515 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SUPERFAMILY SSF52200 947 1050 2.62E-11 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SUPERFAMILY SSF52058 74 339 1.7E-52 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 Pfam PF08477 Ras of Complex, Roc, domain of DAPkinase 374 451 1.1E-6 T 22-04-2016 IPR013684 Mitochondrial Rho-like GO:0005525|GO:0007264 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 Gene3D G3DSA:3.40.50.300 364 444 2.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 PANTHER PTHR24365 847 853 7.6E-68 T 22-04-2016 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 PANTHER PTHR24365 98 310 7.6E-68 T 22-04-2016 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 Gene3D G3DSA:3.80.10.10 45 212 1.7E-35 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 Gene3D G3DSA:3.80.10.10 213 360 1.5E-33 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 Gene3D G3DSA:3.40.50.10140 948 1053 3.6E-4 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00365 229 250 25.0 T 22-04-2016 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00365 119 140 35.0 T 22-04-2016 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00365 97 118 0.33 T 22-04-2016 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00365 251 272 0.083 T 22-04-2016 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00365 295 316 0.35 T 22-04-2016 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00365 185 206 0.084 T 22-04-2016 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00365 141 162 0.045 T 22-04-2016 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00365 207 228 0.084 T 22-04-2016 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00365 273 294 0.11 T 22-04-2016 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00365 163 184 0.084 T 22-04-2016 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00369 141 162 25.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00369 97 119 19.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00369 163 184 37.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00369 185 206 37.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00369 229 250 100.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00369 207 228 37.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00369 273 294 23.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00369 251 272 32.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00369 295 318 71.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 Pfam PF12799 Leucine Rich repeats (2 copies) 186 227 4.7E-7 T 22-04-2016 IPR025875 Leucine rich repeat 4 PGJ_RS08080 f66bc4ed1bfaf6937654d0fbf33d4faa 1109 SMART SM00255 945 1096 0.0015 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 PGJ_RS03765 c97fe0d6705bfd155c865abcb5f2b283 395 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 313 333 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PGJ_RS03765 c97fe0d6705bfd155c865abcb5f2b283 395 Pfam PF00860 Permease family 12 366 1.6E-88 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PGJ_RS03765 c97fe0d6705bfd155c865abcb5f2b283 395 PANTHER PTHR11119:SF49 5 395 2.2E-159 T 22-04-2016 PGJ_RS03765 c97fe0d6705bfd155c865abcb5f2b283 395 PANTHER PTHR11119 5 395 2.2E-159 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PGJ_RS03765 c97fe0d6705bfd155c865abcb5f2b283 395 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 10 389 2.4E-108 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PGJ_RS01365 08b6a263d55510c3de529ec8017019ae 134 Pfam PF00581 Rhodanese-like domain 42 131 1.0E-16 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS01365 08b6a263d55510c3de529ec8017019ae 134 SUPERFAMILY SSF52821 27 131 2.36E-27 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS01365 08b6a263d55510c3de529ec8017019ae 134 SMART SM00450 40 132 8.9E-18 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS01365 08b6a263d55510c3de529ec8017019ae 134 Gene3D G3DSA:3.40.250.10 29 131 7.1E-27 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 PANTHER PTHR30081:SF8 369 677 1.2E-111 T 22-04-2016 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 PANTHER PTHR30081:SF8 60 122 1.2E-111 T 22-04-2016 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 PANTHER PTHR30081:SF8 167 226 1.2E-111 T 22-04-2016 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 71 641 4.8E-116 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 Pfam PF02355 Protein export membrane protein 469 645 4.9E-20 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 Pfam PF02355 Protein export membrane protein 791 972 1.3E-49 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 698 963 1.6E-58 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 PRINTS PR01755 Bacterial translocase SecF protein signature 911 926 4.1E-18 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 PRINTS PR01755 Bacterial translocase SecF protein signature 697 712 4.1E-18 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 PRINTS PR01755 Bacterial translocase SecF protein signature 879 897 4.1E-18 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 SUPERFAMILY SSF82866 796 975 4.32E-34 T 22-04-2016 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 405 635 2.3E-70 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 Gene3D G3DSA:1.20.1640.10 792 977 1.4E-28 T 22-04-2016 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 Gene3D G3DSA:1.20.1640.10 449 649 2.1E-29 T 22-04-2016 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 Pfam PF07549 SecD/SecF GG Motif 693 719 7.5E-8 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 PANTHER PTHR30081 369 677 1.2E-111 T 22-04-2016 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 PANTHER PTHR30081 60 122 1.2E-111 T 22-04-2016 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 PANTHER PTHR30081 167 226 1.2E-111 T 22-04-2016 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 670 974 25.353 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 657 36.014 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PGJ_RS07600 7200b0bf664aee183823ac89940667ad 981 SUPERFAMILY SSF82866 451 647 1.44E-41 T 22-04-2016 PGJ_RS00635 5c9350d394a059b6c81117354bef2369 293 SUPERFAMILY SSF55048 126 187 9.02E-19 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 PGJ_RS00635 5c9350d394a059b6c81117354bef2369 293 Gene3D G3DSA:3.30.70.250 122 191 1.2E-30 T 22-04-2016 PGJ_RS00635 5c9350d394a059b6c81117354bef2369 293 SUPERFAMILY SSF52151 1 118 9.42E-79 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PGJ_RS00635 5c9350d394a059b6c81117354bef2369 293 SUPERFAMILY SSF52151 185 289 9.42E-79 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PGJ_RS00635 5c9350d394a059b6c81117354bef2369 293 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 293 9.2E-53 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain PGJ_RS00635 5c9350d394a059b6c81117354bef2369 293 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 286 1.0E-105 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 PGJ_RS00635 5c9350d394a059b6c81117354bef2369 293 Gene3D G3DSA:3.40.366.10 192 287 2.9E-77 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PGJ_RS00635 5c9350d394a059b6c81117354bef2369 293 Gene3D G3DSA:3.40.366.10 3 118 2.9E-77 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PGJ_RS00635 5c9350d394a059b6c81117354bef2369 293 Pfam PF00698 Acyl transferase domain 4 281 1.4E-45 T 22-04-2016 IPR014043 Acyl transferase PGJ_RS00635 5c9350d394a059b6c81117354bef2369 293 PANTHER PTHR10982 1 293 3.1E-149 T 22-04-2016 PGJ_RS00635 5c9350d394a059b6c81117354bef2369 293 PIRSF PIRSF000446 1 292 8.6E-100 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 PGJ_RS05165 166d0add17cfb608ff65e5e13bcb381b 635 PANTHER PTHR30217:SF10 3 625 7.4E-170 T 22-04-2016 PGJ_RS05165 166d0add17cfb608ff65e5e13bcb381b 635 PANTHER PTHR30217 3 625 7.4E-170 T 22-04-2016 PGJ_RS05165 166d0add17cfb608ff65e5e13bcb381b 635 Pfam PF12392 Collagenase 395 507 4.5E-18 T 22-04-2016 IPR020988 Peptidase U32, collagenase KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PGJ_RS05165 166d0add17cfb608ff65e5e13bcb381b 635 Pfam PF01136 Peptidase family U32 81 308 4.2E-69 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PGJ_RS05165 166d0add17cfb608ff65e5e13bcb381b 635 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PGJ_RS09110 1fc9f7710493f836e0ed89f8e20d120e 158 TIGRFAM TIGR01201 HU_rel: putative DNA-binding protein 1 158 1.7E-51 T 22-04-2016 IPR005902 Putative DNA-binding protein, HU-related PGJ_RS09110 1fc9f7710493f836e0ed89f8e20d120e 158 Gene3D G3DSA:4.10.520.10 32 118 1.2E-5 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS09110 1fc9f7710493f836e0ed89f8e20d120e 158 SUPERFAMILY SSF47729 32 120 1.43E-10 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS09915 1d269785b033e0dd9675f12c4708219d 339 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 9 165 3.6E-16 T 22-04-2016 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 PGJ_RS09915 1d269785b033e0dd9675f12c4708219d 339 PANTHER PTHR10366 6 317 3.1E-27 T 22-04-2016 PGJ_RS09915 1d269785b033e0dd9675f12c4708219d 339 Gene3D G3DSA:3.40.50.720 4 247 1.6E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09915 1d269785b033e0dd9675f12c4708219d 339 SUPERFAMILY SSF51735 4 296 7.42E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02575 dedf77633611659ff05a65ce1ca859de 338 Pfam PF01565 FAD binding domain 43 139 2.5E-13 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PGJ_RS02575 dedf77633611659ff05a65ce1ca859de 338 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 12 337 5.8E-63 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS02575 dedf77633611659ff05a65ce1ca859de 338 SUPERFAMILY SSF56194 210 337 1.7E-47 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS02575 dedf77633611659ff05a65ce1ca859de 338 PANTHER PTHR21071 1 337 2.6E-128 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS02575 dedf77633611659ff05a65ce1ca859de 338 Gene3D G3DSA:3.90.78.10 238 337 1.9E-41 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS02575 dedf77633611659ff05a65ce1ca859de 338 Gene3D G3DSA:3.30.465.10 78 237 1.8E-44 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PGJ_RS02575 dedf77633611659ff05a65ce1ca859de 338 Gene3D G3DSA:3.30.43.10 7 71 1.4E-13 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PGJ_RS02575 dedf77633611659ff05a65ce1ca859de 338 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 338 69.946 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS02575 dedf77633611659ff05a65ce1ca859de 338 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 214 337 8.3E-34 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS02575 dedf77633611659ff05a65ce1ca859de 338 PANTHER PTHR21071:SF6 1 337 2.6E-128 T 22-04-2016 PGJ_RS02575 dedf77633611659ff05a65ce1ca859de 338 SUPERFAMILY SSF56176 7 196 1.85E-34 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 Pfam PF06480 FtsH Extracellular 19 131 1.3E-7 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 Gene3D G3DSA:3.40.50.300 189 371 4.3E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 230 362 4.3E-45 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 SMART SM00382 225 365 8.7E-24 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 135 627 2.4E-214 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 ProSitePatterns PS00674 AAA-protein family signature. 333 351 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 SUPERFAMILY SSF140990 445 633 7.85E-64 T 22-04-2016 PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 Pfam PF01434 Peptidase family M41 424 626 1.7E-70 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 PANTHER PTHR23076:SF10 3 638 0.0 T 22-04-2016 PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 PANTHER PTHR23076 3 638 0.0 T 22-04-2016 PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 12 643 34.513 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 Gene3D G3DSA:1.10.8.60 372 437 4.4E-26 T 22-04-2016 PGJ_RS00200 2cdfcb94819235962ab68d336581cbb4 673 SUPERFAMILY SSF52540 187 434 5.85E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06440 d05fb94b88bd145088e3da85c8bfa4a5 296 PANTHER PTHR30636 1 296 4.8E-75 T 22-04-2016 PGJ_RS06440 d05fb94b88bd145088e3da85c8bfa4a5 296 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 295 2.2E-51 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 PGJ_RS06440 d05fb94b88bd145088e3da85c8bfa4a5 296 Pfam PF08340 Domain of unknown function (DUF1732) 212 295 2.4E-29 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 PGJ_RS06440 d05fb94b88bd145088e3da85c8bfa4a5 296 Pfam PF03755 YicC-like family, N-terminal region 2 161 1.2E-32 T 22-04-2016 IPR013527 YicC-like, N-terminal PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 Gene3D G3DSA:3.40.50.20 1 97 2.5E-31 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 PANTHER PTHR10520 1 420 5.4E-201 T 22-04-2016 PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 SMART SM01209 106 299 2.1E-118 T 22-04-2016 PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 37.361 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 105 1.1E-31 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 Gene3D G3DSA:3.30.1490.20 125 194 1.9E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 SUPERFAMILY SSF51246 332 424 9.42E-24 T 22-04-2016 IPR011054 Rudiment single hybrid motif PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 106 299 6.2E-68 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.7E-134 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 334 421 1.7E-22 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 Gene3D G3DSA:3.30.470.20 195 328 2.5E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 SUPERFAMILY SSF52440 1 106 9.93E-30 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 Gene3D G3DSA:3.90.600.10 334 422 2.1E-23 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 SUPERFAMILY SSF56059 107 322 4.65E-58 T 22-04-2016 PGJ_RS02490 11709ed3d0cb720cdac73d733ff43b04 431 SMART SM01210 333 424 9.2E-34 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PGJ_RS00220 c3ba632ac90c7267b3bc1d7a6db062b5 395 Gene3D G3DSA:3.30.565.10 246 390 4.2E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS00220 c3ba632ac90c7267b3bc1d7a6db062b5 395 Gene3D G3DSA:1.10.287.130 174 234 1.0E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PGJ_RS00220 c3ba632ac90c7267b3bc1d7a6db062b5 395 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 390 4.6E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS00220 c3ba632ac90c7267b3bc1d7a6db062b5 395 SUPERFAMILY SSF47384 175 235 7.46E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PGJ_RS00220 c3ba632ac90c7267b3bc1d7a6db062b5 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 349 2.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS00220 c3ba632ac90c7267b3bc1d7a6db062b5 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 335 2.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS00220 c3ba632ac90c7267b3bc1d7a6db062b5 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 389 2.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS00220 c3ba632ac90c7267b3bc1d7a6db062b5 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 368 2.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS00220 c3ba632ac90c7267b3bc1d7a6db062b5 395 PANTHER PTHR24423 5 395 1.5E-38 T 22-04-2016 PGJ_RS00220 c3ba632ac90c7267b3bc1d7a6db062b5 395 SUPERFAMILY SSF55874 242 390 3.41E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS00220 c3ba632ac90c7267b3bc1d7a6db062b5 395 SMART SM00387 284 392 5.0E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 28 439 7.3E-124 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 Pfam PF01966 HD domain 66 192 3.7E-8 T 22-04-2016 IPR006674 HD domain PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 PANTHER PTHR11373 156 444 8.2E-71 T 22-04-2016 PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 PANTHER PTHR11373 1 138 8.2E-71 T 22-04-2016 PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 SMART SM00471 62 261 1.1E-4 T 22-04-2016 IPR003607 HD/PDEase domain PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 SUPERFAMILY SSF109604 230 439 1.65E-63 T 22-04-2016 PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 SUPERFAMILY SSF109604 26 195 1.65E-63 T 22-04-2016 PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 Pfam PF13286 Phosphohydrolase-associated domain 339 437 4.1E-7 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 Gene3D G3DSA:1.10.3410.10 251 358 1.3E-36 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 Gene3D G3DSA:1.10.3210.10 157 250 1.2E-59 T 22-04-2016 IPR006674 HD domain PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 Gene3D G3DSA:1.10.3210.10 1 118 1.2E-59 T 22-04-2016 IPR006674 HD domain PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 PANTHER PTHR11373:SF29 156 444 8.2E-71 T 22-04-2016 PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 PANTHER PTHR11373:SF29 1 138 8.2E-71 T 22-04-2016 PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 Gene3D G3DSA:1.10.3550.10 359 443 4.7E-35 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain PGJ_RS08680 b6f6cb4e8844e69e29bf1c9f9fd67950 444 Gene3D G3DSA:1.10.3550.10 119 154 4.7E-35 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain PGJ_RS04685 7188c914ebe1af055b68992a0b352fe8 550 SUPERFAMILY SSF56821 5 548 5.36E-204 T 22-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 PGJ_RS04685 7188c914ebe1af055b68992a0b352fe8 550 PIRSF PIRSF000076 5 550 4.0E-253 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 PGJ_RS04685 7188c914ebe1af055b68992a0b352fe8 550 Gene3D G3DSA:1.20.1270.20 3 152 2.2E-38 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 PGJ_RS04685 7188c914ebe1af055b68992a0b352fe8 550 PANTHER PTHR30109 1 549 1.6E-276 T 22-04-2016 PGJ_RS04685 7188c914ebe1af055b68992a0b352fe8 550 Gene3D G3DSA:1.20.1270.20 153 227 6.4E-29 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 PGJ_RS04685 7188c914ebe1af055b68992a0b352fe8 550 PANTHER PTHR30109:SF0 1 549 1.6E-276 T 22-04-2016 PGJ_RS04685 7188c914ebe1af055b68992a0b352fe8 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 5 548 2.4E-220 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 PGJ_RS04685 7188c914ebe1af055b68992a0b352fe8 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 5 550 23.157 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 PGJ_RS04685 7188c914ebe1af055b68992a0b352fe8 550 Gene3D G3DSA:3.40.50.2030 229 379 1.0E-68 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 PGJ_RS04685 7188c914ebe1af055b68992a0b352fe8 550 Pfam PF03063 Prismane/CO dehydrogenase family 5 545 2.6E-177 T 22-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 PGJ_RS04685 7188c914ebe1af055b68992a0b352fe8 550 Gene3D G3DSA:3.40.50.2030 380 547 2.7E-74 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 SUPERFAMILY SSF52317 1 196 1.74E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 Gene3D G3DSA:3.40.50.880 3 193 3.0E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 190 1.2E-44 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PANTHER PTHR11922:SF7 3 191 3.0E-56 T 22-04-2016 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 75 91 2.3E-6 T 22-04-2016 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 45 59 2.3E-6 T 22-04-2016 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 Pfam PF00117 Glutamine amidotransferase class-I 6 188 3.7E-40 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 2.9E-12 T 22-04-2016 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 2.9E-12 T 22-04-2016 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 75 86 2.9E-12 T 22-04-2016 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PRINTS PR00097 Anthranilate synthase component II signature 48 57 1.4E-27 T 22-04-2016 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.4E-27 T 22-04-2016 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PRINTS PR00097 Anthranilate synthase component II signature 122 134 1.4E-27 T 22-04-2016 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PRINTS PR00097 Anthranilate synthase component II signature 168 181 1.4E-27 T 22-04-2016 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PRINTS PR00097 Anthranilate synthase component II signature 100 108 1.4E-27 T 22-04-2016 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PRINTS PR00097 Anthranilate synthase component II signature 75 86 1.4E-27 T 22-04-2016 PGJ_RS05320 f7b9698c2a0044a10060f4f6946a2089 198 PANTHER PTHR11922 3 191 3.0E-56 T 22-04-2016 PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 SUPERFAMILY SSF52540 17 276 1.9E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 SUPERFAMILY SSF54752 277 334 3.79E-20 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 Hamap MF_00268 Protein RecA [recA]. 14 338 51.624 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 SMART SM00382 66 237 2.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 PANTHER PTHR22942:SF1 3 338 3.3E-188 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 ProSitePatterns PS00321 recA signature. 222 230 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 14 333 3.2E-173 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 PRINTS PR00142 RecA protein signature 306 323 3.0E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 PRINTS PR00142 RecA protein signature 219 247 3.0E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 PRINTS PR00142 RecA protein signature 136 165 3.0E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 PRINTS PR00142 RecA protein signature 174 203 3.0E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 PRINTS PR00142 RecA protein signature 102 131 3.0E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 PRINTS PR00142 RecA protein signature 252 281 3.0E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 Gene3D G3DSA:3.30.250.10 277 335 1.4E-26 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 Gene3D G3DSA:3.40.50.300 40 276 4.2E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 PANTHER PTHR22942 3 338 3.3E-188 T 22-04-2016 PGJ_RS04725 b85a49711a07511bb19c8693e1836466 340 Pfam PF00154 recA bacterial DNA recombination protein 16 277 3.5E-136 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 199 26.149 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 Gene3D G3DSA:1.10.8.10 156 202 8.2E-13 T 22-04-2016 PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 Pfam PF14520 Helix-hairpin-helix domain 71 128 1.4E-13 T 22-04-2016 PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 SUPERFAMILY SSF47781 64 131 2.97E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 Pfam PF07499 RuvA, C-terminal domain 159 200 1.3E-9 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 201 3.7E-44 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 Pfam PF01330 RuvA N terminal domain 1 61 1.3E-18 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 SMART SM00278 72 91 0.14 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 SMART SM00278 107 126 2.1 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 SUPERFAMILY SSF50249 1 62 6.28E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 SUPERFAMILY SSF46929 158 202 2.09E-10 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 Gene3D G3DSA:1.10.150.20 66 137 3.2E-25 T 22-04-2016 PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 Gene3D G3DSA:2.40.50.140 1 65 1.7E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS04905 f58282b93e14d7b3219a74b9975a8ddf 202 PANTHER PTHR33796 2 202 1.2E-61 T 22-04-2016 PGJ_RS05640 63eda2f7306e894a8b39207d744cf101 260 PANTHER PTHR13696 1 249 5.9E-33 T 22-04-2016 PGJ_RS05640 63eda2f7306e894a8b39207d744cf101 260 PANTHER PTHR13696:SF52 1 249 5.9E-33 T 22-04-2016 PGJ_RS05640 63eda2f7306e894a8b39207d744cf101 260 Gene3D G3DSA:3.40.50.300 2 252 4.5E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05640 63eda2f7306e894a8b39207d744cf101 260 SUPERFAMILY SSF52540 5 251 7.11E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05640 63eda2f7306e894a8b39207d744cf101 260 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 216 3.2E-12 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PGJ_RS05830 0a262ec677a98ada91db4490dc845d1b 413 Gene3D G3DSA:1.10.150.210 204 255 7.1E-27 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 PGJ_RS05830 0a262ec677a98ada91db4490dc845d1b 413 SUPERFAMILY SSF55021 8 84 5.64E-10 T 22-04-2016 PGJ_RS05830 0a262ec677a98ada91db4490dc845d1b 413 Gene3D G3DSA:3.40.50.1000 256 384 7.0E-42 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS05830 0a262ec677a98ada91db4490dc845d1b 413 PANTHER PTHR10000 172 403 1.7E-90 T 22-04-2016 PGJ_RS05830 0a262ec677a98ada91db4490dc845d1b 413 Gene3D G3DSA:3.30.70.260 98 194 2.4E-13 T 22-04-2016 PGJ_RS05830 0a262ec677a98ada91db4490dc845d1b 413 Gene3D G3DSA:3.30.70.260 11 87 9.5E-13 T 22-04-2016 PGJ_RS05830 0a262ec677a98ada91db4490dc845d1b 413 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 179 396 4.0E-80 T 22-04-2016 PGJ_RS05830 0a262ec677a98ada91db4490dc845d1b 413 Pfam PF12710 haloacid dehalogenase-like hydrolase 195 361 1.3E-18 T 22-04-2016 PGJ_RS05830 0a262ec677a98ada91db4490dc845d1b 413 Pfam PF13740 ACT domain 7 80 2.3E-25 T 22-04-2016 PGJ_RS05830 0a262ec677a98ada91db4490dc845d1b 413 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 194 364 3.2E-35 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PGJ_RS05830 0a262ec677a98ada91db4490dc845d1b 413 PANTHER PTHR10000:SF7 172 403 1.7E-90 T 22-04-2016 PGJ_RS05830 0a262ec677a98ada91db4490dc845d1b 413 SUPERFAMILY SSF56784 191 399 8.54E-54 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS07080 96e30c2c9b278b53fc387bec66d1cf2f 63 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07080 96e30c2c9b278b53fc387bec66d1cf2f 63 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 4 52 1.4E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07080 96e30c2c9b278b53fc387bec66d1cf2f 63 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 52 3.0E-13 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07080 96e30c2c9b278b53fc387bec66d1cf2f 63 Pfam PF01165 Ribosomal protein S21 4 54 1.4E-19 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07080 96e30c2c9b278b53fc387bec66d1cf2f 63 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 5.1E-10 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07080 96e30c2c9b278b53fc387bec66d1cf2f 63 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 5.1E-10 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07080 96e30c2c9b278b53fc387bec66d1cf2f 63 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 5.1E-10 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07080 96e30c2c9b278b53fc387bec66d1cf2f 63 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 5.1E-10 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07080 96e30c2c9b278b53fc387bec66d1cf2f 63 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 19.925 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07080 96e30c2c9b278b53fc387bec66d1cf2f 63 PANTHER PTHR21109 1 48 1.0E-11 T 22-04-2016 PGJ_RS03545 e5efa54d21dc20f42cca6eb146eb384b 523 SUPERFAMILY SSF51703 3 516 2.35E-229 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 PGJ_RS03545 e5efa54d21dc20f42cca6eb146eb384b 523 Pfam PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit 7 513 2.0E-272 T 22-04-2016 IPR015130 D-Lysine 5,6-aminomutase alpha subunit PGJ_RS03545 e5efa54d21dc20f42cca6eb146eb384b 523 Gene3D G3DSA:3.20.20.440 3 516 3.2E-248 T 22-04-2016 IPR015130 D-Lysine 5,6-aminomutase alpha subunit PGJ_RS07940 87b07be7098a1d717f8092af74fbf8e8 557 Gene3D G3DSA:3.40.50.980 6 187 4.5E-25 T 22-04-2016 PGJ_RS07940 87b07be7098a1d717f8092af74fbf8e8 557 PANTHER PTHR24096:SF193 4 553 1.6E-122 T 22-04-2016 PGJ_RS07940 87b07be7098a1d717f8092af74fbf8e8 557 Gene3D G3DSA:3.30.300.30 459 554 1.4E-5 T 22-04-2016 PGJ_RS07940 87b07be7098a1d717f8092af74fbf8e8 557 Gene3D G3DSA:2.30.38.10 373 448 3.7E-23 T 22-04-2016 PGJ_RS07940 87b07be7098a1d717f8092af74fbf8e8 557 Pfam PF00501 AMP-binding enzyme 21 456 1.3E-79 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PGJ_RS07940 87b07be7098a1d717f8092af74fbf8e8 557 PANTHER PTHR24096 4 553 1.6E-122 T 22-04-2016 PGJ_RS07940 87b07be7098a1d717f8092af74fbf8e8 557 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 22-04-2016 IPR020845 AMP-binding, conserved site PGJ_RS07940 87b07be7098a1d717f8092af74fbf8e8 557 Gene3D G3DSA:3.40.50.980 188 369 4.1E-28 T 22-04-2016 PGJ_RS07940 87b07be7098a1d717f8092af74fbf8e8 557 SUPERFAMILY SSF56801 317 554 7.2E-101 T 22-04-2016 PGJ_RS07940 87b07be7098a1d717f8092af74fbf8e8 557 SUPERFAMILY SSF56801 8 289 7.2E-101 T 22-04-2016 PGJ_RS00095 c04b1c79b8e578275ae1012f0f4b6ce8 218 SMART SM00881 88 189 3.9E-19 T 22-04-2016 IPR003781 CoA-binding GO:0048037 PGJ_RS00095 c04b1c79b8e578275ae1012f0f4b6ce8 218 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 10 218 34.884 T 22-04-2016 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 PGJ_RS00095 c04b1c79b8e578275ae1012f0f4b6ce8 218 SUPERFAMILY SSF51735 94 214 1.69E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS00095 c04b1c79b8e578275ae1012f0f4b6ce8 218 PANTHER PTHR35786 2 215 7.9E-86 T 22-04-2016 PGJ_RS00095 c04b1c79b8e578275ae1012f0f4b6ce8 218 Pfam PF06971 Putative DNA-binding protein N-terminus 14 62 7.2E-18 T 22-04-2016 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 PGJ_RS00095 c04b1c79b8e578275ae1012f0f4b6ce8 218 SUPERFAMILY SSF46785 16 88 3.4E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS00095 c04b1c79b8e578275ae1012f0f4b6ce8 218 Gene3D G3DSA:1.10.10.10 14 84 2.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS00095 c04b1c79b8e578275ae1012f0f4b6ce8 218 PANTHER PTHR35786:SF1 2 215 7.9E-86 T 22-04-2016 PGJ_RS00095 c04b1c79b8e578275ae1012f0f4b6ce8 218 Gene3D G3DSA:3.40.50.720 86 216 1.6E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS00095 c04b1c79b8e578275ae1012f0f4b6ce8 218 Pfam PF02629 CoA binding domain 93 187 7.1E-19 T 22-04-2016 IPR003781 CoA-binding GO:0048037 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 SUPERFAMILY SSF50494 63 290 7.47E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 SUPERFAMILY SSF50156 280 389 9.32E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 PANTHER PTHR22939 65 393 1.5E-109 T 22-04-2016 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 PANTHER PTHR22939:SF79 65 393 1.5E-109 T 22-04-2016 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 Gene3D G3DSA:2.40.10.10 182 299 1.4E-42 T 22-04-2016 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 65 484 1.8E-148 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 SUPERFAMILY SSF50156 426 497 9.07E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 Pfam PF13365 Trypsin-like peptidase domain 120 259 8.4E-34 T 22-04-2016 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 PRINTS PR00834 HtrA/DegQ protease family signature 252 269 3.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 PRINTS PR00834 HtrA/DegQ protease family signature 338 350 3.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 PRINTS PR00834 HtrA/DegQ protease family signature 129 141 3.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 PRINTS PR00834 HtrA/DegQ protease family signature 150 170 3.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 PRINTS PR00834 HtrA/DegQ protease family signature 230 247 3.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 PRINTS PR00834 HtrA/DegQ protease family signature 190 214 3.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 Gene3D G3DSA:2.40.10.10 64 181 4.9E-37 T 22-04-2016 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 Gene3D G3DSA:2.30.42.10 407 498 5.1E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 Gene3D G3DSA:2.30.42.10 300 396 2.9E-26 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 Pfam PF12812 PDZ-like domain 399 470 5.1E-17 T 22-04-2016 IPR025926 PDZ-like domain PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 Pfam PF13180 PDZ domain 309 389 5.7E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 SMART SM00228 406 485 0.0072 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS06095 f6ccd06f27481bb38c98dd692a557983 498 SMART SM00228 298 380 3.1E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS09665 61bcb6d872c2cbad19e7c2c0d4502c38 455 SUPERFAMILY SSF54001 207 420 4.41E-40 T 22-04-2016 PGJ_RS09665 61bcb6d872c2cbad19e7c2c0d4502c38 455 SUPERFAMILY SSF54001 73 155 4.41E-40 T 22-04-2016 PGJ_RS09665 61bcb6d872c2cbad19e7c2c0d4502c38 455 ProDom PD004169 PRECURSOR CYSTEINE STREPTOCOCCAL STREPTOPAIN PROTEINASE PROTEASE THIOL B STREPTOCOCCUS EXOTOXIN 219 256 3.0E-6 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS09665 61bcb6d872c2cbad19e7c2c0d4502c38 455 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 390 411 1.4E-5 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS09665 61bcb6d872c2cbad19e7c2c0d4502c38 455 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 234 258 1.4E-5 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS09665 61bcb6d872c2cbad19e7c2c0d4502c38 455 Pfam PF01640 Peptidase C10 family 219 404 1.8E-29 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 SUPERFAMILY SSF54211 13 145 7.59E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS05100 50139909ca598a7eb85883100a291630 743 SUPERFAMILY SSF55666 139 229 1.54E-24 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Gene3D G3DSA:1.10.10.400 231 317 1.2E-24 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 SMART SM00316 626 698 7.3E-20 T 22-04-2016 IPR022967 RNA-binding domain, S1 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 SUPERFAMILY SSF55666 451 551 2.52E-25 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 PANTHER PTHR11252:SF0 1 720 0.0 T 22-04-2016 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 SUPERFAMILY SSF54791 551 626 5.87E-14 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 SMART SM00322 555 623 3.9E-9 T 22-04-2016 IPR004087 K Homology domain GO:0003676 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 13 699 8.3E-282 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 SUPERFAMILY SSF54211 294 491 5.06E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Pfam PF00575 S1 RNA binding domain 625 698 3.0E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 701 28.832 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 PIRSF PIRSF005499 2 731 4.0E-283 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 SUPERFAMILY SSF50249 615 702 2.09E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 323 2.6E-12 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Pfam PF01138 3' exoribonuclease family, domain 1 14 145 4.7E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Pfam PF01138 3' exoribonuclease family, domain 1 326 456 9.2E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Pfam PF03725 3' exoribonuclease family, domain 2 149 212 5.1E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Pfam PF03725 3' exoribonuclease family, domain 2 461 532 6.3E-7 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 PANTHER PTHR11252 1 720 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Gene3D G3DSA:2.40.50.140 627 702 1.6E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Gene3D G3DSA:3.30.230.70 318 544 1.1E-79 T 22-04-2016 IPR027408 PNPase/RNase PH domain PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Gene3D G3DSA:3.30.230.70 5 224 1.5E-75 T 22-04-2016 IPR027408 PNPase/RNase PH domain PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Gene3D G3DSA:3.30.1370.10 554 626 1.7E-19 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 PGJ_RS05100 50139909ca598a7eb85883100a291630 743 Pfam PF00013 KH domain 559 619 1.0E-10 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 PGJ_RS04430 a5d4acfb7b92df66728a9e5757f154e5 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 28.239 T 22-04-2016 IPR002930 Glycine cleavage system H-protein PGJ_RS04430 a5d4acfb7b92df66728a9e5757f154e5 126 SUPERFAMILY SSF51230 4 124 1.7E-43 T 22-04-2016 IPR011053 Single hybrid motif PGJ_RS04430 a5d4acfb7b92df66728a9e5757f154e5 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PGJ_RS04430 a5d4acfb7b92df66728a9e5757f154e5 126 PANTHER PTHR11715 4 126 2.8E-56 T 22-04-2016 IPR002930 Glycine cleavage system H-protein PGJ_RS04430 a5d4acfb7b92df66728a9e5757f154e5 126 Gene3D G3DSA:2.40.50.100 6 125 3.6E-48 T 22-04-2016 PGJ_RS04430 a5d4acfb7b92df66728a9e5757f154e5 126 Pfam PF01597 Glycine cleavage H-protein 7 124 1.7E-43 T 22-04-2016 IPR002930 Glycine cleavage system H-protein PGJ_RS04430 a5d4acfb7b92df66728a9e5757f154e5 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 124 1.2E-45 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 PGJ_RS08650 94fba2fc8eddcebc0089c3530f99b4e6 289 Pfam PF01791 DeoC/LacD family aldolase 56 252 5.9E-18 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 PGJ_RS08650 94fba2fc8eddcebc0089c3530f99b4e6 289 SMART SM01133 45 285 7.9E-66 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 PGJ_RS08650 94fba2fc8eddcebc0089c3530f99b4e6 289 PANTHER PTHR10889 46 288 5.5E-85 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 PGJ_RS08650 94fba2fc8eddcebc0089c3530f99b4e6 289 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 49 266 1.5E-47 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 PGJ_RS08650 94fba2fc8eddcebc0089c3530f99b4e6 289 SUPERFAMILY SSF51569 46 285 2.62E-67 T 22-04-2016 PGJ_RS08650 94fba2fc8eddcebc0089c3530f99b4e6 289 PIRSF PIRSF001357 39 289 1.0E-80 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 PGJ_RS08650 94fba2fc8eddcebc0089c3530f99b4e6 289 Gene3D G3DSA:3.20.20.70 40 285 3.4E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS05235 c03f8d1c6f6e561cc4a93189112dcea2 404 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 404 1.4E-172 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 PGJ_RS05235 c03f8d1c6f6e561cc4a93189112dcea2 404 PANTHER PTHR11601 5 404 9.9E-189 T 22-04-2016 PGJ_RS05235 c03f8d1c6f6e561cc4a93189112dcea2 404 Gene3D G3DSA:3.90.1150.10 283 399 1.2E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS05235 c03f8d1c6f6e561cc4a93189112dcea2 404 Pfam PF00266 Aminotransferase class-V 24 393 7.4E-142 T 22-04-2016 IPR000192 Aminotransferase class V domain PGJ_RS05235 c03f8d1c6f6e561cc4a93189112dcea2 404 SUPERFAMILY SSF53383 2 401 7.05E-131 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS05235 c03f8d1c6f6e561cc4a93189112dcea2 404 PANTHER PTHR11601:SF17 5 404 9.9E-189 T 22-04-2016 PGJ_RS05235 c03f8d1c6f6e561cc4a93189112dcea2 404 PIRSF PIRSF005572 21 404 9.8E-57 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 PGJ_RS05235 c03f8d1c6f6e561cc4a93189112dcea2 404 Gene3D G3DSA:3.40.640.10 37 282 5.7E-89 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS03540 e758d4861211a35e2d6cac06434991b4 465 PANTHER PTHR11361 174 394 3.3E-35 T 22-04-2016 PGJ_RS03540 e758d4861211a35e2d6cac06434991b4 465 Pfam PF00488 MutS domain V 272 461 1.1E-26 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS03540 e758d4861211a35e2d6cac06434991b4 465 Gene3D G3DSA:3.40.50.300 241 463 2.8E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03540 e758d4861211a35e2d6cac06434991b4 465 SMART SM00534 272 462 1.5E-11 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS03540 e758d4861211a35e2d6cac06434991b4 465 PANTHER PTHR11361:SF14 174 394 3.3E-35 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 PGJ_RS03540 e758d4861211a35e2d6cac06434991b4 465 SUPERFAMILY SSF52540 240 393 3.31E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01955 3e1cddacfa352c6240592cc817b2b7d8 308 PANTHER PTHR30573 1 307 1.1E-124 T 22-04-2016 PGJ_RS01955 3e1cddacfa352c6240592cc817b2b7d8 308 Pfam PF02445 Quinolinate synthetase A protein 9 306 9.1E-108 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PGJ_RS01955 3e1cddacfa352c6240592cc817b2b7d8 308 SUPERFAMILY SSF142754 5 306 6.02E-103 T 22-04-2016 PGJ_RS01955 3e1cddacfa352c6240592cc817b2b7d8 308 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 1 307 1.8E-98 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PGJ_RS00770 0fd1ecc991b83fb5075f978435287c32 192 PANTHER PTHR33284 4 188 3.0E-46 T 22-04-2016 PGJ_RS00770 0fd1ecc991b83fb5075f978435287c32 192 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 180 1.4E-22 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain PGJ_RS00770 0fd1ecc991b83fb5075f978435287c32 192 Gene3D G3DSA:2.170.120.20 99 185 7.0E-25 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain PGJ_RS00770 0fd1ecc991b83fb5075f978435287c32 192 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 178 6.3E-40 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PGJ_RS00770 0fd1ecc991b83fb5075f978435287c32 192 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 11 95 2.0E-43 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PGJ_RS00770 0fd1ecc991b83fb5075f978435287c32 192 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 182 24.692 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PGJ_RS00770 0fd1ecc991b83fb5075f978435287c32 192 Pfam PF01386 Ribosomal L25p family 6 92 7.4E-28 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PGJ_RS00770 0fd1ecc991b83fb5075f978435287c32 192 SUPERFAMILY SSF50715 10 180 1.12E-48 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 PGJ_RS00770 0fd1ecc991b83fb5075f978435287c32 192 Gene3D G3DSA:2.40.240.10 4 95 2.0E-29 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SUPERFAMILY SSF48452 367 748 3.7E-44 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00028 599 633 36.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00028 424 458 74.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00028 704 738 63.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00028 529 563 22.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00028 669 703 26.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00028 494 528 45.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00028 634 668 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00028 459 493 33.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00028 386 423 180.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00028 564 598 84.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Gene3D G3DSA:1.25.40.10 375 558 3.5E-36 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Pfam PF13431 Tetratricopeptide repeat 622 655 3.1E-6 T 22-04-2016 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Pfam PF13431 Tetratricopeptide repeat 447 480 3.2E-5 T 22-04-2016 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Pfam PF13431 Tetratricopeptide repeat 482 515 2.6E-5 T 22-04-2016 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Pfam PF13431 Tetratricopeptide repeat 657 690 7.6E-5 T 22-04-2016 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Pfam PF13431 Tetratricopeptide repeat 517 550 2.2E-5 T 22-04-2016 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Pfam PF13181 Tetratricopeptide repeat 581 598 0.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Pfam PF13181 Tetratricopeptide repeat 721 738 0.15 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SUPERFAMILY SSF52467 26 244 1.02E-9 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00386 369 401 410.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00386 649 681 180.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00386 719 751 150.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00386 474 506 110.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00386 579 611 100.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00386 509 541 110.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00386 614 646 440.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00386 439 471 600.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00386 404 436 500.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00386 684 716 130.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 SMART SM00386 544 576 240.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Gene3D G3DSA:1.25.40.10 638 693 2.4E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Pfam PF13289 SIR2-like domain 131 251 3.6E-9 T 22-04-2016 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Gene3D G3DSA:3.40.50.1220 195 260 1.8E-7 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Gene3D G3DSA:3.40.50.1220 26 43 1.8E-7 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Gene3D G3DSA:3.40.50.1220 113 159 1.8E-7 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Gene3D G3DSA:1.25.40.10 559 637 1.3E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 PANTHER PTHR23083 273 750 1.6E-61 T 22-04-2016 PGJ_RS04160 e25b130b8121f3a0773d5720230c50e0 847 Gene3D G3DSA:1.25.40.10 694 774 3.8E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04720 ecf2d280a99aef973d92ea8e637adc73 321 Gene3D G3DSA:3.40.630.30 128 286 3.1E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS04720 ecf2d280a99aef973d92ea8e637adc73 321 SUPERFAMILY SSF55729 145 293 9.15E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS04720 ecf2d280a99aef973d92ea8e637adc73 321 Pfam PF13480 Acetyltransferase (GNAT) domain 151 271 3.4E-9 T 22-04-2016 PGJ_RS01015 38d705af2afe0de89b1961ee2474bc91 212 Pfam PF01914 MarC family integral membrane protein 17 202 2.0E-28 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PGJ_RS01015 38d705af2afe0de89b1961ee2474bc91 212 PANTHER PTHR33508 12 209 3.5E-35 T 22-04-2016 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 Pfam PF03144 Elongation factor Tu domain 2 225 294 4.1E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 PANTHER PTHR23115:SF112 1 394 9.1E-241 T 22-04-2016 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 SUPERFAMILY SSF52540 9 226 2.38E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 SUPERFAMILY SSF50447 203 302 3.14E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 Pfam PF03143 Elongation factor Tu C-terminal domain 300 393 1.6E-31 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 Gene3D G3DSA:2.40.30.10 210 298 4.7E-37 T 22-04-2016 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 3.3E-222 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 Gene3D G3DSA:2.40.30.10 301 393 3.2E-44 T 22-04-2016 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.2E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.2E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.2E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.2E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.2E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.4E-58 T 22-04-2016 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 59.389 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 SUPERFAMILY SSF50465 303 395 3.84E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 Gene3D G3DSA:3.40.50.300 3 209 3.6E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 8.1E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 PANTHER PTHR23115 1 394 9.1E-241 T 22-04-2016 PGJ_RS07060 edad7af037bfe6f8f54e7199965c1de2 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site PGJ_RS03015 29d82827c6263ba35f5a639cb1e18d97 528 Pfam PF00772 DnaB-like helicase N terminal domain 25 125 5.8E-30 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PGJ_RS03015 29d82827c6263ba35f5a639cb1e18d97 528 SUPERFAMILY SSF48024 23 134 1.7E-29 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PGJ_RS03015 29d82827c6263ba35f5a639cb1e18d97 528 Gene3D G3DSA:1.10.860.10 25 127 2.1E-31 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PGJ_RS03015 29d82827c6263ba35f5a639cb1e18d97 528 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 25 465 1.0E-156 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 PGJ_RS03015 29d82827c6263ba35f5a639cb1e18d97 528 SUPERFAMILY SSF52540 199 457 7.18E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03015 29d82827c6263ba35f5a639cb1e18d97 528 PANTHER PTHR30153 8 474 9.0E-180 T 22-04-2016 PGJ_RS03015 29d82827c6263ba35f5a639cb1e18d97 528 Pfam PF03796 DnaB-like helicase C terminal domain 200 462 5.5E-102 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 PGJ_RS03015 29d82827c6263ba35f5a639cb1e18d97 528 Gene3D G3DSA:3.40.50.300 187 466 1.7E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01590 b575ab5ec2c6799a6ec2c92358c572cc 368 PANTHER PTHR32347:SF14 7 358 1.6E-44 T 22-04-2016 PGJ_RS01590 b575ab5ec2c6799a6ec2c92358c572cc 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 358 1.2E-40 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PGJ_RS01590 b575ab5ec2c6799a6ec2c92358c572cc 368 Gene3D G3DSA:2.40.50.100 61 94 1.1E-9 T 22-04-2016 PGJ_RS01590 b575ab5ec2c6799a6ec2c92358c572cc 368 Gene3D G3DSA:2.40.50.100 176 203 1.1E-9 T 22-04-2016 PGJ_RS01590 b575ab5ec2c6799a6ec2c92358c572cc 368 PANTHER PTHR32347 7 358 1.6E-44 T 22-04-2016 PGJ_RS01590 b575ab5ec2c6799a6ec2c92358c572cc 368 SUPERFAMILY SSF111369 52 234 8.5E-13 T 22-04-2016 PGJ_RS01590 b575ab5ec2c6799a6ec2c92358c572cc 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 261 5.6E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PGJ_RS00325 973484c187c42a6ebaacc720a432d6ba 313 SUPERFAMILY SSF54106 268 311 2.49E-6 T 22-04-2016 IPR018392 LysM domain PGJ_RS00325 973484c187c42a6ebaacc720a432d6ba 313 Pfam PF01476 LysM domain 217 254 0.017 T 22-04-2016 IPR018392 LysM domain PGJ_RS00325 973484c187c42a6ebaacc720a432d6ba 313 Pfam PF01476 LysM domain 270 310 1.6E-4 T 22-04-2016 IPR018392 LysM domain PGJ_RS00325 973484c187c42a6ebaacc720a432d6ba 313 SMART SM00257 269 313 0.0043 T 22-04-2016 IPR018392 LysM domain PGJ_RS00325 973484c187c42a6ebaacc720a432d6ba 313 SMART SM00257 213 257 1.2 T 22-04-2016 IPR018392 LysM domain PGJ_RS00325 973484c187c42a6ebaacc720a432d6ba 313 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 41 166 1.0E-19 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 PGJ_RS00325 973484c187c42a6ebaacc720a432d6ba 313 Gene3D G3DSA:3.10.350.10 267 312 2.0E-8 T 22-04-2016 IPR018392 LysM domain PGJ_RS00325 973484c187c42a6ebaacc720a432d6ba 313 SMART SM00047 23 171 5.4E-29 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 PGJ_RS02605 e60a691421fc243a30d2178141741389 326 Pfam PF01145 SPFH domain / Band 7 family 25 217 7.8E-33 T 22-04-2016 IPR001107 Band 7 domain PGJ_RS02605 e60a691421fc243a30d2178141741389 326 ProSitePatterns PS01270 Band 7 protein family signature. 157 185 - T 22-04-2016 IPR018080 Band 7/stomatin-like, conserved site PGJ_RS02605 e60a691421fc243a30d2178141741389 326 SUPERFAMILY SSF117892 81 208 2.35E-39 T 22-04-2016 IPR001107 Band 7 domain PGJ_RS02605 e60a691421fc243a30d2178141741389 326 PANTHER PTHR10264:SF27 79 310 1.2E-106 T 22-04-2016 PGJ_RS02605 e60a691421fc243a30d2178141741389 326 PANTHER PTHR10264:SF27 6 54 1.2E-106 T 22-04-2016 PGJ_RS02605 e60a691421fc243a30d2178141741389 326 PANTHER PTHR10264 79 310 1.2E-106 T 22-04-2016 IPR001972 Stomatin family GO:0016020 PGJ_RS02605 e60a691421fc243a30d2178141741389 326 PANTHER PTHR10264 6 54 1.2E-106 T 22-04-2016 IPR001972 Stomatin family GO:0016020 PGJ_RS02605 e60a691421fc243a30d2178141741389 326 SMART SM00244 21 201 6.8E-52 T 22-04-2016 IPR001107 Band 7 domain PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 SUPERFAMILY SSF46600 629 675 2.48E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 Gene3D G3DSA:3.40.50.300 420 581 6.5E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 669 6.4E-293 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 Pfam PF04851 Type III restriction enzyme, res subunit 9 84 6.3E-8 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 Gene3D G3DSA:3.30.2060.10 159 236 2.2E-8 T 22-04-2016 PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 Hamap MF_00204 UvrABC system protein B [uvrB]. 1 672 40.544 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 SUPERFAMILY SSF52540 458 587 1.11E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 SUPERFAMILY SSF52540 35 65 1.11E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 Gene3D G3DSA:3.40.50.300 389 410 1.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 Gene3D G3DSA:3.40.50.300 5 87 1.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 Gene3D G3DSA:3.40.50.300 279 339 1.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 Pfam PF00271 Helicase conserved C-terminal domain 436 545 1.8E-17 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 Pfam PF02151 UvrB/uvrC motif 638 671 8.0E-5 T 22-04-2016 IPR001943 UVR domain GO:0005515 PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 Gene3D G3DSA:4.10.860.10 627 675 2.8E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 Pfam PF12344 Ultra-violet resistance protein B 553 593 1.6E-21 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 SUPERFAMILY SSF52540 4 416 2.26E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 SMART SM00490 461 547 2.1E-18 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 SMART SM00487 7 426 3.1E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PGJ_RS07100 e27605a7ae72b93860865bb9df5615dc 678 PANTHER PTHR24029 1 676 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 Pfam PF13620 Carboxypeptidase regulatory-like domain 443 515 3.9E-8 T 22-04-2016 PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 Gene3D G3DSA:3.30.1330.60 534 668 1.7E-35 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 Pfam PF00691 OmpA family 538 626 4.4E-17 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 Gene3D G3DSA:2.60.40.1120 443 532 1.3E-9 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 SUPERFAMILY SSF82171 167 369 9.81E-13 T 22-04-2016 PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 SUPERFAMILY SSF49464 443 526 1.31E-9 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 SUPERFAMILY SSF48452 32 148 6.56E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 Pfam PF07676 WD40-like Beta Propeller Repeat 331 368 9.0E-5 T 22-04-2016 IPR011659 WD40-like Beta Propeller PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 Pfam PF07676 WD40-like Beta Propeller Repeat 168 190 0.13 T 22-04-2016 IPR011659 WD40-like Beta Propeller PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 Pfam PF07676 WD40-like Beta Propeller Repeat 226 252 0.0031 T 22-04-2016 IPR011659 WD40-like Beta Propeller PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 Pfam PF07676 WD40-like Beta Propeller Repeat 291 317 0.026 T 22-04-2016 IPR011659 WD40-like Beta Propeller PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 SUPERFAMILY SSF103088 535 666 2.06E-27 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 Gene3D G3DSA:2.120.10.30 167 403 2.5E-13 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 PANTHER PTHR30128 535 639 6.2E-32 T 22-04-2016 PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 PANTHER PTHR30128 659 670 6.2E-32 T 22-04-2016 PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 PRINTS PR01021 OMPA domain signature 539 561 3.4E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 PRINTS PR01021 OMPA domain signature 569 584 3.4E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 PRINTS PR01021 OMPA domain signature 584 600 3.4E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PGJ_RS03995 02ef5c6b8e2c8fc6325df65ef7b86b4e 672 Gene3D G3DSA:1.25.40.10 37 149 7.9E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 PANTHER PTHR32063 2 1020 0.0 T 22-04-2016 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 5.6E-31 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 5.6E-31 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 5.6E-31 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.6E-31 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.6E-31 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 5.6E-31 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 Gene3D G3DSA:1.10.3850.10 276 503 2.0E-58 T 22-04-2016 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 Gene3D G3DSA:1.10.3850.10 807 1024 2.8E-49 T 22-04-2016 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 SUPERFAMILY SSF82866 296 500 5.49E-42 T 22-04-2016 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 SUPERFAMILY SSF82714 185 266 2.62E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 Gene3D G3DSA:3.30.70.1430 43 132 1.6E-25 T 22-04-2016 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 SUPERFAMILY SSF82714 717 799 3.92E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 SUPERFAMILY SSF82693 43 130 5.75E-23 T 22-04-2016 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 PANTHER PTHR32063:SF4 2 1020 0.0 T 22-04-2016 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1025 6.9E-240 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 SUPERFAMILY SSF82866 802 1024 2.62E-46 T 22-04-2016 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 Gene3D G3DSA:3.30.2090.10 184 266 3.2E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 Pfam PF00873 AcrB/AcrD/AcrF family 5 1022 1.5E-267 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 Gene3D G3DSA:3.30.2090.10 716 804 7.6E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 SUPERFAMILY SSF82693 270 320 2.62E-16 T 22-04-2016 PGJ_RS00275 75f6eec3c69785b31e250274aabf8cb0 1039 SUPERFAMILY SSF82693 140 183 2.62E-16 T 22-04-2016 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 Gene3D G3DSA:3.50.50.60 3 228 6.9E-93 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 Gene3D G3DSA:3.50.50.60 333 392 6.9E-93 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 SUPERFAMILY SSF46977 418 513 5.36E-26 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 Pfam PF00890 FAD binding domain 5 376 2.2E-93 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 Gene3D G3DSA:3.90.700.10 229 332 1.4E-38 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.4E-6 T 22-04-2016 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 354 361 7.4E-6 T 22-04-2016 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 PANTHER PTHR11632:SF27 3 504 1.6E-209 T 22-04-2016 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 496 1.4E-162 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 SUPERFAMILY SSF56425 223 337 1.26E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 SUPERFAMILY SSF51905 3 249 3.89E-66 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 SUPERFAMILY SSF51905 340 409 3.89E-66 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 Pfam PF02910 Fumarate reductase flavoprotein C-term 422 509 3.6E-13 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 PIRSF PIRSF000171 1 513 6.1E-36 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 Gene3D G3DSA:1.20.58.100 415 510 1.6E-22 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 PANTHER PTHR11632 3 504 1.6E-209 T 22-04-2016 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 339 361 4.4E-7 T 22-04-2016 PGJ_RS01965 7530764dafbc200f11a57022ae5079e0 518 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.4E-7 T 22-04-2016 PGJ_RS05055 f71bfc976f0f884ec90de5fb0aa88e7c 239 Pfam PF00814 Glycoprotease family 38 145 1.1E-21 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PGJ_RS05055 f71bfc976f0f884ec90de5fb0aa88e7c 239 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 8 221 2.5E-46 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 PGJ_RS05055 f71bfc976f0f884ec90de5fb0aa88e7c 239 PANTHER PTHR11735:SF11 8 137 6.4E-33 T 22-04-2016 PGJ_RS05055 f71bfc976f0f884ec90de5fb0aa88e7c 239 SUPERFAMILY SSF53067 117 219 1.26E-11 T 22-04-2016 PGJ_RS05055 f71bfc976f0f884ec90de5fb0aa88e7c 239 PANTHER PTHR11735 8 137 6.4E-33 T 22-04-2016 PGJ_RS05055 f71bfc976f0f884ec90de5fb0aa88e7c 239 SUPERFAMILY SSF53067 8 110 2.33E-21 T 22-04-2016 PGJ_RS05055 f71bfc976f0f884ec90de5fb0aa88e7c 239 Gene3D G3DSA:3.30.420.40 8 140 3.0E-33 T 22-04-2016 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 484 495 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 390 1.7E-81 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 Pfam PF00391 PEP-utilising enzyme, mobile domain 456 537 1.2E-25 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 Gene3D G3DSA:3.50.30.10 437 540 3.8E-41 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 SUPERFAMILY SSF56059 2 412 2.35E-134 T 22-04-2016 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 PANTHER PTHR22931:SF9 1 906 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 SUPERFAMILY SSF51621 547 902 1.26E-123 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 Gene3D G3DSA:1.20.80.30 117 208 1.6E-34 T 22-04-2016 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 Gene3D G3DSA:1.10.189.10 376 436 4.0E-29 T 22-04-2016 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 Gene3D G3DSA:3.30.1490.20 211 254 1.8E-55 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 Gene3D G3DSA:3.30.1490.20 5 116 1.8E-55 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 794 812 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 PIRSF PIRSF000853 2 908 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 PANTHER PTHR22931 1 906 0.0 T 22-04-2016 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 Gene3D G3DSA:3.30.470.20 255 375 9.8E-36 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 553 902 1.5E-90 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 SUPERFAMILY SSF52009 424 546 1.44E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 904 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PGJ_RS04155 a2e34a4683316f93238653d463a48f5c 908 Gene3D G3DSA:3.20.20.60 567 905 2.7E-136 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PGJ_RS02210 04e41ad2b1ef7e8fc22f61543fcae9d3 228 SMART SM00028 139 172 9.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS02210 04e41ad2b1ef7e8fc22f61543fcae9d3 228 SMART SM00028 176 209 2.4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS02210 04e41ad2b1ef7e8fc22f61543fcae9d3 228 SUPERFAMILY SSF48452 94 211 5.87E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS02210 04e41ad2b1ef7e8fc22f61543fcae9d3 228 Pfam PF13424 Tetratricopeptide repeat 142 202 6.6E-9 T 22-04-2016 PGJ_RS02210 04e41ad2b1ef7e8fc22f61543fcae9d3 228 Gene3D G3DSA:1.25.40.10 110 210 9.2E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS00375 ce54e0062c0391106c46dd51352c226a 202 Gene3D G3DSA:3.40.50.10490 6 190 2.0E-39 T 22-04-2016 PGJ_RS00375 ce54e0062c0391106c46dd51352c226a 202 Pfam PF01380 SIS domain 42 170 1.2E-22 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PGJ_RS00375 ce54e0062c0391106c46dd51352c226a 202 SUPERFAMILY SSF53697 5 195 5.56E-41 T 22-04-2016 PGJ_RS00375 ce54e0062c0391106c46dd51352c226a 202 PANTHER PTHR38418 22 197 2.9E-28 T 22-04-2016 PGJ_RS00375 ce54e0062c0391106c46dd51352c226a 202 PANTHER PTHR38418:SF1 22 197 2.9E-28 T 22-04-2016 PGJ_RS07715 1eb4926fbac754f53a1473b3493d8149 264 Pfam PF11959 Domain of unknown function (DUF3473) 132 257 2.7E-10 T 22-04-2016 IPR022560 Domain of unknown function DUF3473 PGJ_RS07715 1eb4926fbac754f53a1473b3493d8149 264 Gene3D G3DSA:3.20.20.370 1 259 2.8E-34 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PGJ_RS07715 1eb4926fbac754f53a1473b3493d8149 264 SUPERFAMILY SSF88713 31 261 4.73E-22 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PGJ_RS07715 1eb4926fbac754f53a1473b3493d8149 264 Pfam PF01522 Polysaccharide deacetylase 19 98 9.9E-8 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PGJ_RS07570 2ce3f3945535e5f540730dad6bcbb6ef 293 Gene3D G3DSA:3.20.20.70 1 292 4.2E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS07570 2ce3f3945535e5f540730dad6bcbb6ef 293 Pfam PF00274 Fructose-bisphosphate aldolase class-I 18 188 6.7E-9 T 22-04-2016 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS07570 2ce3f3945535e5f540730dad6bcbb6ef 293 PANTHER PTHR11627:SF20 18 179 2.0E-22 T 22-04-2016 PGJ_RS07570 2ce3f3945535e5f540730dad6bcbb6ef 293 PANTHER PTHR11627 18 179 2.0E-22 T 22-04-2016 PGJ_RS07570 2ce3f3945535e5f540730dad6bcbb6ef 293 Hamap MF_00729 Fructose-bisphosphate aldolase class 1 [fda]. 2 292 53.454 T 22-04-2016 IPR023014 Fructose-bisphosphate aldolase class I, Gram positive bacteria-type GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 PGJ_RS07570 2ce3f3945535e5f540730dad6bcbb6ef 293 SUPERFAMILY SSF51569 4 292 5.02E-92 T 22-04-2016 PGJ_RS08385 1ba86f6369884e4cd249ac0ac1f12e8e 209 SUPERFAMILY SSF52166 1 207 9.42E-70 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 PGJ_RS08385 1ba86f6369884e4cd249ac0ac1f12e8e 209 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 204 1.3E-68 T 22-04-2016 IPR013005 50S ribosomal protein uL4 PGJ_RS08385 1ba86f6369884e4cd249ac0ac1f12e8e 209 Gene3D G3DSA:3.40.1370.10 58 207 3.0E-54 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 PGJ_RS08385 1ba86f6369884e4cd249ac0ac1f12e8e 209 Pfam PF00573 Ribosomal protein L4/L1 family 18 204 5.3E-58 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 PGJ_RS08385 1ba86f6369884e4cd249ac0ac1f12e8e 209 PANTHER PTHR10746 1 206 1.3E-78 T 22-04-2016 IPR013005 50S ribosomal protein uL4 PGJ_RS08385 1ba86f6369884e4cd249ac0ac1f12e8e 209 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 208 29.926 T 22-04-2016 IPR013005 50S ribosomal protein uL4 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 Pfam PF14559 Tetratricopeptide repeat 342 396 4.2E-8 T 22-04-2016 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 SUPERFAMILY SSF48452 187 392 1.9E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 SUPERFAMILY SSF48452 52 153 1.9E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 Pfam PF13181 Tetratricopeptide repeat 54 85 0.051 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 PANTHER PTHR23083 221 416 7.8E-33 T 22-04-2016 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 PANTHER PTHR23083 51 186 7.8E-33 T 22-04-2016 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 Gene3D G3DSA:1.25.40.10 138 234 1.5E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 Gene3D G3DSA:1.25.40.10 269 394 1.7E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 Gene3D G3DSA:1.25.40.10 235 268 8.8E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 Gene3D G3DSA:1.25.40.10 38 137 9.3E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 Pfam PF13432 Tetratricopeptide repeat 264 318 3.4E-4 T 22-04-2016 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 SMART SM00028 292 325 39.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 SMART SM00028 330 363 1.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 SMART SM00028 53 86 0.093 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 SMART SM00028 153 186 120.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS07430 1fd5d2f8dfa6dfcfa032bf1da8159335 430 SMART SM00028 364 397 0.49 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03145 2874682b216fd2583e1103b09465e9b7 337 SUPERFAMILY SSF48452 153 316 1.52E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS03145 2874682b216fd2583e1103b09465e9b7 337 SUPERFAMILY SSF48452 48 145 3.51E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS03145 2874682b216fd2583e1103b09465e9b7 337 PANTHER PTHR23083 39 329 1.7E-27 T 22-04-2016 PGJ_RS03145 2874682b216fd2583e1103b09465e9b7 337 Pfam PF14559 Tetratricopeptide repeat 167 231 3.5E-6 T 22-04-2016 PGJ_RS03145 2874682b216fd2583e1103b09465e9b7 337 Pfam PF14559 Tetratricopeptide repeat 233 287 8.1E-6 T 22-04-2016 PGJ_RS03145 2874682b216fd2583e1103b09465e9b7 337 SMART SM00028 256 289 120.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03145 2874682b216fd2583e1103b09465e9b7 337 SMART SM00028 117 150 56.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03145 2874682b216fd2583e1103b09465e9b7 337 SMART SM00028 50 83 54.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03145 2874682b216fd2583e1103b09465e9b7 337 SMART SM00028 222 255 16.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03145 2874682b216fd2583e1103b09465e9b7 337 SMART SM00028 188 221 34.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03145 2874682b216fd2583e1103b09465e9b7 337 Gene3D G3DSA:1.25.40.10 49 311 5.0E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04650 8cb605b0fd365eaf7b156c737a55b892 527 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 524 7.3E-174 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PGJ_RS04650 8cb605b0fd365eaf7b156c737a55b892 527 PANTHER PTHR30365 398 527 1.4E-198 T 22-04-2016 PGJ_RS04650 8cb605b0fd365eaf7b156c737a55b892 527 PANTHER PTHR30365 1 331 1.4E-198 T 22-04-2016 PGJ_RS04650 8cb605b0fd365eaf7b156c737a55b892 527 PANTHER PTHR30365:SF0 398 527 1.4E-198 T 22-04-2016 PGJ_RS04650 8cb605b0fd365eaf7b156c737a55b892 527 PANTHER PTHR30365:SF0 1 331 1.4E-198 T 22-04-2016 PGJ_RS08635 829477935c98f43691d97e0c751db659 599 SUPERFAMILY SSF46600 195 242 6.02E-7 T 22-04-2016 IPR001943 UVR domain GO:0005515 PGJ_RS08635 829477935c98f43691d97e0c751db659 599 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 595 25.674 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 PGJ_RS08635 829477935c98f43691d97e0c751db659 599 Gene3D G3DSA:1.10.150.20 545 597 2.0E-16 T 22-04-2016 PGJ_RS08635 829477935c98f43691d97e0c751db659 599 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 382 532 1.1E-48 T 22-04-2016 IPR001162 UvrC family homology region PGJ_RS08635 829477935c98f43691d97e0c751db659 599 SUPERFAMILY SSF47781 510 597 4.45E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PGJ_RS08635 829477935c98f43691d97e0c751db659 599 Pfam PF01541 GIY-YIG catalytic domain 17 92 2.5E-12 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily PGJ_RS08635 829477935c98f43691d97e0c751db659 599 PANTHER PTHR30562:SF1 2 596 6.5E-207 T 22-04-2016 PGJ_RS08635 829477935c98f43691d97e0c751db659 599 PANTHER PTHR30562 2 596 6.5E-207 T 22-04-2016 PGJ_RS08635 829477935c98f43691d97e0c751db659 599 SUPERFAMILY SSF82771 16 99 4.58E-24 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily PGJ_RS08635 829477935c98f43691d97e0c751db659 599 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 579 2.0E-158 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 PGJ_RS08635 829477935c98f43691d97e0c751db659 599 SMART SM00465 16 97 1.8E-23 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily PGJ_RS08635 829477935c98f43691d97e0c751db659 599 Gene3D G3DSA:4.10.860.10 188 241 1.3E-7 T 22-04-2016 IPR001943 UVR domain GO:0005515 PGJ_RS08635 829477935c98f43691d97e0c751db659 599 Pfam PF14520 Helix-hairpin-helix domain 547 598 7.1E-7 T 22-04-2016 PGJ_RS08635 829477935c98f43691d97e0c751db659 599 Gene3D G3DSA:3.40.1440.10 16 94 2.7E-11 T 22-04-2016 IPR027299 GIY-YIG domain PGJ_RS08520 9a2a75261b69e80f30a977401c81d6af 79 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 2.6E-23 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08520 9a2a75261b69e80f30a977401c81d6af 79 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 17.467 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08520 9a2a75261b69e80f30a977401c81d6af 79 Gene3D G3DSA:2.30.170.40 2 75 5.9E-30 T 22-04-2016 PGJ_RS08520 9a2a75261b69e80f30a977401c81d6af 79 Pfam PF00830 Ribosomal L28 family 3 61 6.5E-22 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 PGJ_RS08520 9a2a75261b69e80f30a977401c81d6af 79 SUPERFAMILY SSF143800 2 74 3.73E-25 T 22-04-2016 PGJ_RS08520 9a2a75261b69e80f30a977401c81d6af 79 PANTHER PTHR13528 1 74 9.1E-28 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 PRINTS PR00315 GTP-binding elongation factor signature 134 143 3.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 PRINTS PR00315 GTP-binding elongation factor signature 82 92 3.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 PRINTS PR00315 GTP-binding elongation factor signature 98 109 3.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 Gene3D G3DSA:2.40.30.10 310 409 1.9E-36 T 22-04-2016 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 SUPERFAMILY SSF52540 7 286 6.48E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 SMART SM00838 607 695 1.4E-48 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 SMART SM00889 485 605 1.4E-51 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 SUPERFAMILY SSF54211 484 606 7.33E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 SUPERFAMILY SSF54980 610 698 5.28E-30 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 Pfam PF14492 Elongation Factor G, domain II 409 481 5.7E-31 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 698 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 Gene3D G3DSA:3.30.70.870 410 485 3.4E-35 T 22-04-2016 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 Gene3D G3DSA:3.30.70.240 606 693 1.1E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 Gene3D G3DSA:3.40.50.300 6 291 9.9E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 183 1.9E-31 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 SUPERFAMILY SSF54980 407 485 1.44E-23 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 Hamap MF_00054_B Elongation factor G [fusA]. 6 699 106.972 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.6E-14 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 Pfam PF00679 Elongation factor G C-terminus 608 694 1.4E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 PANTHER PTHR23115 308 699 0.0 T 22-04-2016 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 PANTHER PTHR23115 11 181 0.0 T 22-04-2016 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 PANTHER PTHR23115 259 287 0.0 T 22-04-2016 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 Pfam PF03764 Elongation factor G, domain IV 484 604 1.1E-41 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 PANTHER PTHR23115:SF66 308 699 0.0 T 22-04-2016 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 PANTHER PTHR23115:SF66 11 181 0.0 T 22-04-2016 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 PANTHER PTHR23115:SF66 259 287 0.0 T 22-04-2016 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 Pfam PF00009 Elongation factor Tu GTP binding domain 10 286 2.0E-63 T 22-04-2016 PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 SUPERFAMILY SSF50447 269 409 3.79E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 Gene3D G3DSA:3.30.230.10 489 605 1.2E-40 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS08400 b91e13b3c7d6e910cdf65fe1ec7ce859 707 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site PGJ_RS05170 373afd332fb28f4f2e33270184d28b09 216 PANTHER PTHR10285:SF46 9 204 2.6E-45 T 22-04-2016 PGJ_RS05170 373afd332fb28f4f2e33270184d28b09 216 PANTHER PTHR10285 9 204 2.6E-45 T 22-04-2016 PGJ_RS05170 373afd332fb28f4f2e33270184d28b09 216 Pfam PF14681 Uracil phosphoribosyltransferase 9 213 1.5E-34 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS05170 373afd332fb28f4f2e33270184d28b09 216 Gene3D G3DSA:3.40.50.2020 8 213 6.5E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS05170 373afd332fb28f4f2e33270184d28b09 216 SUPERFAMILY SSF53271 8 213 3.55E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 PRINTS PR00046 Major sigma-70 factor signature 226 238 2.3E-25 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 PRINTS PR00046 Major sigma-70 factor signature 247 262 2.3E-25 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 PRINTS PR00046 Major sigma-70 factor signature 102 110 2.3E-25 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 PRINTS PR00046 Major sigma-70 factor signature 78 91 2.3E-25 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 PRINTS PR00046 Major sigma-70 factor signature 262 273 2.3E-25 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 Gene3D G3DSA:1.10.601.10 13 123 2.6E-50 T 22-04-2016 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 PANTHER PTHR30603:SF0 21 286 1.1E-99 T 22-04-2016 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 Pfam PF04545 Sigma-70, region 4 222 275 2.3E-18 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 PANTHER PTHR30603 21 286 1.1E-99 T 22-04-2016 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 PIRSF PIRSF000770 7 280 9.0E-38 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 Pfam PF00140 Sigma-70 factor, region 1.2 17 48 7.1E-11 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 Gene3D G3DSA:1.10.10.10 218 286 5.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 Pfam PF04539 Sigma-70 region 3 134 202 2.9E-16 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 Gene3D G3DSA:1.10.10.10 127 176 1.5E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 275 7.3E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 SUPERFAMILY SSF88659 127 198 1.22E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 SUPERFAMILY SSF88946 14 123 2.09E-41 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 SUPERFAMILY SSF88659 188 278 2.24E-23 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS06090 0819d846e65debf5a96de46aaddab358 287 Pfam PF04542 Sigma-70 region 2 55 123 4.7E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS09700 9f76d5eb3f9ef7d2fbaf8bc986c99a40 465 Gene3D G3DSA:3.90.660.20 226 404 2.1E-41 T 22-04-2016 IPR027418 Protoporphyrinogen oxidase, C-terminal domain KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|UniPathway: UPA00251 PGJ_RS09700 9f76d5eb3f9ef7d2fbaf8bc986c99a40 465 PANTHER PTHR10742 6 454 1.2E-77 T 22-04-2016 PGJ_RS09700 9f76d5eb3f9ef7d2fbaf8bc986c99a40 465 Gene3D G3DSA:3.50.50.60 6 81 8.1E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS09700 9f76d5eb3f9ef7d2fbaf8bc986c99a40 465 SUPERFAMILY SSF54373 295 404 1.79E-27 T 22-04-2016 PGJ_RS09700 9f76d5eb3f9ef7d2fbaf8bc986c99a40 465 SUPERFAMILY SSF51905 6 311 6.8E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS09700 9f76d5eb3f9ef7d2fbaf8bc986c99a40 465 SUPERFAMILY SSF51905 421 453 6.8E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS09700 9f76d5eb3f9ef7d2fbaf8bc986c99a40 465 Pfam PF01593 Flavin containing amine oxidoreductase 12 452 3.0E-47 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 PGJ_RS09700 9f76d5eb3f9ef7d2fbaf8bc986c99a40 465 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 5 452 1.6E-79 T 22-04-2016 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|UniPathway: UPA00251 PGJ_RS09700 9f76d5eb3f9ef7d2fbaf8bc986c99a40 465 PANTHER PTHR10742:SF294 6 454 1.2E-77 T 22-04-2016 PGJ_RS09700 9f76d5eb3f9ef7d2fbaf8bc986c99a40 465 Gene3D G3DSA:1.10.3110.10 97 193 4.3E-27 T 22-04-2016 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 295 1.4E-26 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 PANTHER PTHR11405:SF16 1 301 4.6E-128 T 22-04-2016 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 SUPERFAMILY SSF53671 1 299 2.49E-92 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 139 5.4E-42 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 Gene3D G3DSA:3.40.50.1370 1 136 5.7E-51 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 300 36.379 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 Gene3D G3DSA:3.40.50.1370 137 285 1.1E-49 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 2.5E-35 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 257 262 2.5E-35 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 2.5E-35 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 72 81 2.5E-35 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 218 227 2.5E-35 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 279 293 2.5E-35 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 297 8.3E-105 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 PANTHER PTHR11405 1 301 4.6E-128 T 22-04-2016 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 1.6E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 1.6E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 1.6E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PGJ_RS07185 a423c34418c66e9a1dd6783771878386 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 263 286 1.6E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PGJ_RS01860 5f32f2b819f3d56631ed06c551a4add0 226 Pfam PF01252 Signal peptidase (SPase) II 18 196 6.8E-35 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PGJ_RS01860 5f32f2b819f3d56631ed06c551a4add0 226 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 9 205 13.696 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PGJ_RS01860 5f32f2b819f3d56631ed06c551a4add0 226 PANTHER PTHR33695:SF1 179 196 2.6E-30 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PGJ_RS01860 5f32f2b819f3d56631ed06c551a4add0 226 PANTHER PTHR33695:SF1 13 117 2.6E-30 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PGJ_RS01860 5f32f2b819f3d56631ed06c551a4add0 226 PANTHER PTHR33695:SF1 144 162 2.6E-30 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PGJ_RS01860 5f32f2b819f3d56631ed06c551a4add0 226 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 55 63 5.2E-14 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PGJ_RS01860 5f32f2b819f3d56631ed06c551a4add0 226 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 5.2E-14 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PGJ_RS01860 5f32f2b819f3d56631ed06c551a4add0 226 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 180 196 5.2E-14 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PGJ_RS01860 5f32f2b819f3d56631ed06c551a4add0 226 PANTHER PTHR33695 179 196 2.6E-30 T 22-04-2016 PGJ_RS01860 5f32f2b819f3d56631ed06c551a4add0 226 PANTHER PTHR33695 13 117 2.6E-30 T 22-04-2016 PGJ_RS01860 5f32f2b819f3d56631ed06c551a4add0 226 PANTHER PTHR33695 144 162 2.6E-30 T 22-04-2016 PGJ_RS07500 38de342fc0fc2631dadd6e96ef684981 501 PANTHER PTHR30026 37 500 3.4E-73 T 22-04-2016 PGJ_RS07500 38de342fc0fc2631dadd6e96ef684981 501 Gene3D G3DSA:1.20.1600.10 35 100 1.9E-50 T 22-04-2016 PGJ_RS07500 38de342fc0fc2631dadd6e96ef684981 501 Gene3D G3DSA:1.20.1600.10 146 484 1.9E-50 T 22-04-2016 PGJ_RS07500 38de342fc0fc2631dadd6e96ef684981 501 Pfam PF02321 Outer membrane efflux protein 339 484 2.2E-16 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS07500 38de342fc0fc2631dadd6e96ef684981 501 Pfam PF02321 Outer membrane efflux protein 39 275 6.6E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS07500 38de342fc0fc2631dadd6e96ef684981 501 PANTHER PTHR30026:SF7 37 500 3.4E-73 T 22-04-2016 PGJ_RS07500 38de342fc0fc2631dadd6e96ef684981 501 SUPERFAMILY SSF56954 3 90 8.76E-61 T 22-04-2016 PGJ_RS07500 38de342fc0fc2631dadd6e96ef684981 501 SUPERFAMILY SSF56954 144 485 8.76E-61 T 22-04-2016 PGJ_RS08640 49e6e6de0ab24341c69007b89d152f2b 150 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 146 33.235 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PGJ_RS08640 49e6e6de0ab24341c69007b89d152f2b 150 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 145 5.7E-53 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PGJ_RS08640 49e6e6de0ab24341c69007b89d152f2b 150 PANTHER PTHR10472 2 146 4.7E-69 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PGJ_RS08640 49e6e6de0ab24341c69007b89d152f2b 150 Gene3D G3DSA:3.50.80.10 1 148 1.6E-56 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain PGJ_RS08640 49e6e6de0ab24341c69007b89d152f2b 150 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 146 6.0E-54 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PGJ_RS08640 49e6e6de0ab24341c69007b89d152f2b 150 SUPERFAMILY SSF69500 1 146 9.42E-54 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 2 396 3.2E-169 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 SMART SM00382 110 271 7.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 PANTHER PTHR11262:SF4 3 401 4.9E-198 T 22-04-2016 PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 Pfam PF07724 AAA domain (Cdc48 subfamily) 110 306 5.1E-47 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 Pfam PF06689 ClpX C4-type zinc finger 9 44 2.3E-11 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 Gene3D G3DSA:1.10.8.60 312 402 3.2E-29 T 22-04-2016 PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 SUPERFAMILY SSF52540 61 402 1.95E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 SMART SM01086 313 404 3.0E-26 T 22-04-2016 IPR019489 Clp ATPase, C-terminal PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 PANTHER PTHR11262 3 401 4.9E-198 T 22-04-2016 PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 SUPERFAMILY SSF57716 8 43 2.0E-7 T 22-04-2016 PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 313 387 2.5E-13 T 22-04-2016 IPR019489 Clp ATPase, C-terminal PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 410 45.778 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 SMART SM00994 7 46 2.1E-12 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 Gene3D G3DSA:3.40.50.300 66 252 5.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06925 471bd4fbb14314ed382e97478bafb7b5 411 Gene3D G3DSA:3.40.50.300 290 307 5.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07165 4a3ed3c421a6218ec7cfbb15caf4765a 422 PANTHER PTHR30373 19 286 2.0E-48 T 22-04-2016 PGJ_RS07165 4a3ed3c421a6218ec7cfbb15caf4765a 422 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 41 164 2.7E-36 T 22-04-2016 IPR007621 TPM domain PGJ_RS07165 4a3ed3c421a6218ec7cfbb15caf4765a 422 PANTHER PTHR30373:SF2 19 286 2.0E-48 T 22-04-2016 PGJ_RS07165 4a3ed3c421a6218ec7cfbb15caf4765a 422 PANTHER PTHR30373 356 422 2.0E-48 T 22-04-2016 PGJ_RS07165 4a3ed3c421a6218ec7cfbb15caf4765a 422 PANTHER PTHR30373:SF2 356 422 2.0E-48 T 22-04-2016 PGJ_RS08235 dfec283df1759b20832915ae18656b62 315 PANTHER PTHR32120:SF2 1 312 1.2E-102 T 22-04-2016 PGJ_RS08235 dfec283df1759b20832915ae18656b62 315 SUPERFAMILY SSF50249 1 69 8.0E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS08235 dfec283df1759b20832915ae18656b62 315 PANTHER PTHR32120 1 312 1.2E-102 T 22-04-2016 PGJ_RS08235 dfec283df1759b20832915ae18656b62 315 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 43 303 3.1E-57 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 PGJ_RS08235 dfec283df1759b20832915ae18656b62 315 Gene3D G3DSA:2.40.50.140 1 67 9.1E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS08235 dfec283df1759b20832915ae18656b62 315 Gene3D G3DSA:1.10.40.50 248 308 2.1E-22 T 22-04-2016 PGJ_RS08235 dfec283df1759b20832915ae18656b62 315 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 1 310 34.791 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 PGJ_RS08235 dfec283df1759b20832915ae18656b62 315 Gene3D G3DSA:3.40.50.300 80 244 2.4E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08235 dfec283df1759b20832915ae18656b62 315 SUPERFAMILY SSF52540 83 309 8.24E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08235 dfec283df1759b20832915ae18656b62 315 Pfam PF03193 Protein of unknown function, DUF258 65 244 7.5E-50 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 PGJ_RS08235 dfec283df1759b20832915ae18656b62 315 Pfam PF16745 RsgA N-terminal domain 3 53 5.3E-9 T 22-04-2016 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal PGJ_RS01915 6c2728111f599dcb039f44e4ce9d473d 302 Gene3D G3DSA:1.25.40.10 73 141 1.1E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01915 6c2728111f599dcb039f44e4ce9d473d 302 SUPERFAMILY SSF50044 257 299 5.44E-6 T 22-04-2016 IPR001452 SH3 domain GO:0005515 PGJ_RS01915 6c2728111f599dcb039f44e4ce9d473d 302 Gene3D G3DSA:2.30.30.40 257 293 6.9E-5 T 22-04-2016 PGJ_RS01915 6c2728111f599dcb039f44e4ce9d473d 302 SMART SM00028 101 134 1.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01915 6c2728111f599dcb039f44e4ce9d473d 302 Pfam PF13432 Tetratricopeptide repeat 73 134 4.6E-8 T 22-04-2016 PGJ_RS01915 6c2728111f599dcb039f44e4ce9d473d 302 Pfam PF08239 Bacterial SH3 domain 241 293 6.1E-8 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type PGJ_RS01915 6c2728111f599dcb039f44e4ce9d473d 302 SUPERFAMILY SSF48452 76 141 3.5E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07930 ee4d83cd303ba247f488370de6d71a94 167 SUPERFAMILY SSF88946 6 91 5.1E-16 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS07930 ee4d83cd303ba247f488370de6d71a94 167 SUPERFAMILY SSF88659 105 164 2.03E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS07930 ee4d83cd303ba247f488370de6d71a94 167 Pfam PF04542 Sigma-70 region 2 14 73 8.7E-12 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS07930 ee4d83cd303ba247f488370de6d71a94 167 Gene3D G3DSA:1.10.1740.10 5 74 2.2E-17 T 22-04-2016 PGJ_RS07930 ee4d83cd303ba247f488370de6d71a94 167 Pfam PF08281 Sigma-70, region 4 109 159 6.0E-13 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS07930 ee4d83cd303ba247f488370de6d71a94 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 163 8.2E-19 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS07930 ee4d83cd303ba247f488370de6d71a94 167 PANTHER PTHR30173 14 167 7.3E-34 T 22-04-2016 PGJ_RS07930 ee4d83cd303ba247f488370de6d71a94 167 Gene3D G3DSA:1.10.10.10 107 165 1.1E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS09055 2721c62d950cdf70ae08997f2edc9101 169 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 4 150 3.9E-53 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PGJ_RS09055 2721c62d950cdf70ae08997f2edc9101 169 PANTHER PTHR30411:SF0 1 166 7.5E-59 T 22-04-2016 PGJ_RS09055 2721c62d950cdf70ae08997f2edc9101 169 PANTHER PTHR30411 1 166 7.5E-59 T 22-04-2016 PGJ_RS09055 2721c62d950cdf70ae08997f2edc9101 169 Pfam PF04073 Aminoacyl-tRNA editing domain 32 144 2.6E-23 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PGJ_RS09055 2721c62d950cdf70ae08997f2edc9101 169 PIRSF PIRSF006181 1 158 8.6E-64 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PGJ_RS09055 2721c62d950cdf70ae08997f2edc9101 169 SUPERFAMILY SSF55826 4 155 3.92E-40 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PGJ_RS09055 2721c62d950cdf70ae08997f2edc9101 169 Gene3D G3DSA:3.90.960.10 1 155 2.8E-53 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PGJ_RS02065 6ca742f5393a4603478f5be424ebd7f5 289 PANTHER PTHR22572:SF105 2 271 1.2E-155 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PGJ_RS02065 6ca742f5393a4603478f5be424ebd7f5 289 Pfam PF00483 Nucleotidyl transferase 2 238 4.4E-72 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PGJ_RS02065 6ca742f5393a4603478f5be424ebd7f5 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 288 1.5E-144 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PGJ_RS02065 6ca742f5393a4603478f5be424ebd7f5 289 SUPERFAMILY SSF53448 1 288 8.56E-90 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS02065 6ca742f5393a4603478f5be424ebd7f5 289 Gene3D G3DSA:3.90.550.10 1 265 6.0E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS02065 6ca742f5393a4603478f5be424ebd7f5 289 PANTHER PTHR22572 2 271 1.2E-155 T 22-04-2016 PGJ_RS08655 ba32cf37cd145d99464ffab17fbe96d7 324 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 83 97 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PGJ_RS08655 ba32cf37cd145d99464ffab17fbe96d7 324 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 205 217 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PGJ_RS08655 ba32cf37cd145d99464ffab17fbe96d7 324 SUPERFAMILY SSF48576 2 323 2.3E-77 T 22-04-2016 IPR008949 Isoprenoid synthase domain PGJ_RS08655 ba32cf37cd145d99464ffab17fbe96d7 324 Gene3D G3DSA:1.10.600.10 5 323 2.0E-81 T 22-04-2016 IPR008949 Isoprenoid synthase domain PGJ_RS08655 ba32cf37cd145d99464ffab17fbe96d7 324 PANTHER PTHR12001 23 324 7.0E-77 T 22-04-2016 IPR017446 Polyprenyl synthetase-related PGJ_RS08655 ba32cf37cd145d99464ffab17fbe96d7 324 Pfam PF00348 Polyprenyl synthetase 31 270 5.4E-57 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PGJ_RS03945 367aedc48f213b87f0af19eeb0a11ddb 448 Gene3D G3DSA:3.40.1350.10 335 388 1.2E-4 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 PGJ_RS03945 367aedc48f213b87f0af19eeb0a11ddb 448 Gene3D G3DSA:3.40.50.300 3 129 3.9E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03945 367aedc48f213b87f0af19eeb0a11ddb 448 PANTHER PTHR33295 1 436 1.9E-44 T 22-04-2016 PGJ_RS03945 367aedc48f213b87f0af19eeb0a11ddb 448 PANTHER PTHR33295:SF7 1 436 1.9E-44 T 22-04-2016 PGJ_RS03945 367aedc48f213b87f0af19eeb0a11ddb 448 SUPERFAMILY SSF52540 5 204 4.76E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03945 367aedc48f213b87f0af19eeb0a11ddb 448 Pfam PF13173 AAA domain 18 150 9.3E-28 T 22-04-2016 PGJ_RS03945 367aedc48f213b87f0af19eeb0a11ddb 448 SUPERFAMILY SSF52980 334 404 3.86E-5 T 22-04-2016 IPR011335 Restriction endonuclease type II-like PGJ_RS03945 367aedc48f213b87f0af19eeb0a11ddb 448 Pfam PF13635 Domain of unknown function (DUF4143) 222 382 1.2E-22 T 22-04-2016 IPR025420 Domain of unknown function DUF4143 PGJ_RS04530 57fcbdd7210849735e87f1bd887ba0bf 204 SUPERFAMILY SSF57716 149 198 4.56E-12 T 22-04-2016 PGJ_RS04530 57fcbdd7210849735e87f1bd887ba0bf 204 Gene3D G3DSA:3.30.60.20 149 190 9.6E-15 T 22-04-2016 PGJ_RS04530 57fcbdd7210849735e87f1bd887ba0bf 204 PANTHER PTHR11441 1 190 1.3E-78 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 PGJ_RS04530 57fcbdd7210849735e87f1bd887ba0bf 204 PIRSF PIRSF035805 13 203 7.0E-62 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 PGJ_RS04530 57fcbdd7210849735e87f1bd887ba0bf 204 SUPERFAMILY SSF52540 15 148 5.91E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04530 57fcbdd7210849735e87f1bd887ba0bf 204 Hamap MF_00124 Thymidine kinase [tdk]. 15 191 32.295 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 PGJ_RS04530 57fcbdd7210849735e87f1bd887ba0bf 204 Pfam PF00265 Thymidine kinase 16 188 1.6E-52 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 PGJ_RS05420 171b87e74d88dfe792cc82370647396c 486 SUPERFAMILY SSF47203 264 480 9.21E-76 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PGJ_RS05420 171b87e74d88dfe792cc82370647396c 486 PANTHER PTHR36117 1 485 1.7E-179 T 22-04-2016 PGJ_RS05420 171b87e74d88dfe792cc82370647396c 486 PANTHER PTHR36117:SF2 1 485 1.7E-179 T 22-04-2016 PGJ_RS05420 171b87e74d88dfe792cc82370647396c 486 Gene3D G3DSA:1.20.140.10 266 480 9.2E-99 T 22-04-2016 PGJ_RS05420 171b87e74d88dfe792cc82370647396c 486 PIRSF PIRSF000331 1 486 3.1E-180 T 22-04-2016 IPR004925 HpaB/PvcC/4-BUDH PGJ_RS05420 171b87e74d88dfe792cc82370647396c 486 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 280 478 2.5E-81 T 22-04-2016 IPR024719 HpaB/PvcC/4-BUDH C-terminal PGJ_RS05420 171b87e74d88dfe792cc82370647396c 486 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 3 273 4.5E-107 T 22-04-2016 IPR024674 HpaB/PvcC/4-BUDH N-terminal PGJ_RS05420 171b87e74d88dfe792cc82370647396c 486 SUPERFAMILY SSF56645 1 274 3.53E-92 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PGJ_RS05420 171b87e74d88dfe792cc82370647396c 486 Gene3D G3DSA:1.10.3140.10 1 142 9.8E-52 T 22-04-2016 PGJ_RS05420 171b87e74d88dfe792cc82370647396c 486 Gene3D G3DSA:2.40.110.10 144 265 3.7E-52 T 22-04-2016 PGJ_RS09565 d6c0f417d56a5e4d3c5b4b58e0196166 490 Gene3D G3DSA:1.25.40.10 436 482 9.5E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09565 d6c0f417d56a5e4d3c5b4b58e0196166 490 SUPERFAMILY SSF103088 199 293 2.22E-8 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS09565 d6c0f417d56a5e4d3c5b4b58e0196166 490 Pfam PF00691 OmpA family 224 290 1.3E-4 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS09565 d6c0f417d56a5e4d3c5b4b58e0196166 490 Pfam PF12984 Domain of unknown function, B. Theta Gene description (DUF3868) 5 104 1.0E-6 T 22-04-2016 IPR024480 Domain of unknown function DUF3868 PGJ_RS09565 d6c0f417d56a5e4d3c5b4b58e0196166 490 SUPERFAMILY SSF48452 394 470 4.55E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09565 d6c0f417d56a5e4d3c5b4b58e0196166 490 Gene3D G3DSA:3.30.1330.60 198 293 3.8E-9 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS04635 01c4168fe8da911da3d303278f403d4a 342 Gene3D G3DSA:3.40.50.300 3 218 3.2E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04635 01c4168fe8da911da3d303278f403d4a 342 Pfam PF01443 Viral (Superfamily 1) RNA helicase 135 332 9.1E-6 T 22-04-2016 IPR027351 (+) RNA virus helicase core domain GO:0005524 PGJ_RS04635 01c4168fe8da911da3d303278f403d4a 342 SUPERFAMILY SSF52540 4 330 6.66E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08240 de581f8e693d1591187193353fa97c97 186 Gene3D G3DSA:1.10.132.20 67 186 1.0E-42 T 22-04-2016 IPR023584 Ribosome recycling factor domain PGJ_RS08240 de581f8e693d1591187193353fa97c97 186 PANTHER PTHR20982 2 186 4.5E-77 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 PGJ_RS08240 de581f8e693d1591187193353fa97c97 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 26.051 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 PGJ_RS08240 de581f8e693d1591187193353fa97c97 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 13 186 2.3E-67 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 PGJ_RS08240 de581f8e693d1591187193353fa97c97 186 SUPERFAMILY SSF55194 4 185 6.02E-67 T 22-04-2016 IPR023584 Ribosome recycling factor domain PGJ_RS08240 de581f8e693d1591187193353fa97c97 186 Pfam PF01765 Ribosome recycling factor 22 184 5.9E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 Pfam PF07478 D-ala D-ala ligase C-terminus 126 322 4.0E-45 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 SUPERFAMILY SSF52440 3 115 1.73E-24 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 Gene3D G3DSA:3.30.1490.20 141 196 2.0E-16 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 Gene3D G3DSA:3.40.50.20 1 104 1.1E-21 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 Pfam PF01820 D-ala D-ala ligase N-terminus 6 105 1.5E-18 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 SUPERFAMILY SSF56059 117 322 4.71E-45 T 22-04-2016 PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 326 31.201 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 PIRSF PIRSF039102 1 330 1.8E-84 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 PANTHER PTHR23132 6 323 2.1E-64 T 22-04-2016 PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 84 95 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 Gene3D G3DSA:3.30.470.20 113 124 1.6E-41 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 Gene3D G3DSA:3.30.470.20 197 324 1.6E-41 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PGJ_RS05265 59133f13c1db293ae6ef9afb0b826b6d 330 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 268 296 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 PANTHER PTHR11661 1 139 2.0E-60 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 SUPERFAMILY SSF46906 67 139 7.72E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 3.6E-19 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 2.5E-27 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 29.421 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 SMART SM00649 9 140 1.7E-70 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 6.0E-63 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 Gene3D G3DSA:3.30.1550.10 2 71 1.6E-35 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 SUPERFAMILY SSF54747 3 72 3.14E-28 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 3.0E-16 T 22-04-2016 PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 Gene3D G3DSA:1.10.10.250 72 139 3.7E-27 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PGJ_RS07040 ea56a3860324dc2ff3027baafa3ecfd9 145 PANTHER PTHR11661:SF7 1 139 2.0E-60 T 22-04-2016 PGJ_RS01545 804a2d7a5e284547207fe0bc21da6554 618 SUPERFAMILY SSF52242 465 617 1.02E-32 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PGJ_RS01545 804a2d7a5e284547207fe0bc21da6554 618 PANTHER PTHR23408 6 449 4.3E-137 T 22-04-2016 PGJ_RS01545 804a2d7a5e284547207fe0bc21da6554 618 TIGRFAM TIGR00642 mmCoA_mut_beta: methylmalonyl-CoA mutase, small subunit 7 618 8.0E-303 T 22-04-2016 IPR004608 Methylmalonyl-CoA mutase, beta chain GO:0004494|GO:0019652|GO:0031419 KEGG: 00280+5.4.99.2|KEGG: 00630+5.4.99.2|KEGG: 00640+5.4.99.2|KEGG: 00720+5.4.99.2|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|UniPathway: UPA00945 PGJ_RS01545 804a2d7a5e284547207fe0bc21da6554 618 PANTHER PTHR23408:SF15 6 449 4.3E-137 T 22-04-2016 PGJ_RS01545 804a2d7a5e284547207fe0bc21da6554 618 Gene3D G3DSA:3.20.20.240 38 484 9.1E-127 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 PGJ_RS01545 804a2d7a5e284547207fe0bc21da6554 618 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 355 380 - T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 PGJ_RS01545 804a2d7a5e284547207fe0bc21da6554 618 Pfam PF01642 Methylmalonyl-CoA mutase 40 527 2.7E-142 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 PGJ_RS01545 804a2d7a5e284547207fe0bc21da6554 618 Gene3D G3DSA:3.40.50.280 488 617 8.4E-40 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PGJ_RS01545 804a2d7a5e284547207fe0bc21da6554 618 SUPERFAMILY SSF51703 6 522 1.2E-137 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 PGJ_RS04845 a3ca704142b9dcf2df4fb5b9fa7b616f 422 Pfam PF07805 HipA-like N-terminal domain 181 252 7.1E-12 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 PGJ_RS04845 a3ca704142b9dcf2df4fb5b9fa7b616f 422 PANTHER PTHR37419 71 342 5.7E-20 T 22-04-2016 PGJ_RS04845 a3ca704142b9dcf2df4fb5b9fa7b616f 422 PANTHER PTHR37419:SF2 71 342 5.7E-20 T 22-04-2016 PGJ_RS04845 a3ca704142b9dcf2df4fb5b9fa7b616f 422 Pfam PF07804 HipA-like C-terminal domain 258 392 1.4E-29 T 22-04-2016 IPR012893 HipA-like, C-terminal PGJ_RS04845 a3ca704142b9dcf2df4fb5b9fa7b616f 422 Pfam PF13657 HipA N-terminal domain 18 104 6.7E-7 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 Pfam PF00575 S1 RNA binding domain 649 727 5.8E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 SMART SM00955 276 605 7.7E-161 T 22-04-2016 PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 Pfam PF08206 Ribonuclease B OB domain 116 160 4.4E-7 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 Pfam PF08206 Ribonuclease B OB domain 170 227 5.3E-10 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 Gene3D G3DSA:2.40.50.140 649 727 2.3E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 SUPERFAMILY SSF50249 99 231 1.33E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 SUPERFAMILY SSF50249 649 728 7.38E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 SUPERFAMILY SSF50249 203 513 5.14E-139 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 SUPERFAMILY SSF50249 551 647 5.14E-139 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 SMART SM00316 647 730 3.4E-4 T 22-04-2016 IPR022967 RNA-binding domain, S1 PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 Hamap MF_01895 Ribonuclease R [rnr]. 54 730 53.073 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 ProSitePatterns PS01175 Ribonuclease II family signature. 572 596 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 Pfam PF00773 RNB domain 276 604 2.2E-112 T 22-04-2016 PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 TIGRFAM TIGR02063 RNase_R: ribonuclease R 34 728 1.3E-235 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 PANTHER PTHR23355 120 731 4.3E-222 T 22-04-2016 PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 122 730 1.7E-165 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 PGJ_RS01340 2ba8e73bbafa9747bfa70ce02bc3e021 731 PANTHER PTHR23355:SF9 120 731 4.3E-222 T 22-04-2016 PGJ_RS03590 4ef6763c5a349e1fca3ee144c8216b30 336 PANTHER PTHR23406:SF3 199 336 7.1E-53 T 22-04-2016 PGJ_RS03590 4ef6763c5a349e1fca3ee144c8216b30 336 Gene3D G3DSA:3.40.50.10750 137 303 1.8E-66 T 22-04-2016 PGJ_RS03590 4ef6763c5a349e1fca3ee144c8216b30 336 PIRSF PIRSF000428 1 334 3.2E-102 T 22-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PGJ_RS03590 4ef6763c5a349e1fca3ee144c8216b30 336 PANTHER PTHR23406 199 336 7.1E-53 T 22-04-2016 PGJ_RS03590 4ef6763c5a349e1fca3ee144c8216b30 336 SUPERFAMILY SSF53659 1 330 1.89E-94 T 22-04-2016 PGJ_RS03590 4ef6763c5a349e1fca3ee144c8216b30 336 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 327 1.4E-111 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PGJ_RS03590 4ef6763c5a349e1fca3ee144c8216b30 336 Pfam PF01515 Phosphate acetyl/butaryl transferase 3 327 5.2E-122 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PGJ_RS06285 072edc92f5dfe59482a28f1fa42792a4 217 PANTHER PTHR30349:SF26 6 216 1.4E-64 T 22-04-2016 PGJ_RS06285 072edc92f5dfe59482a28f1fa42792a4 217 SUPERFAMILY SSF56349 3 213 1.77E-32 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS06285 072edc92f5dfe59482a28f1fa42792a4 217 PANTHER PTHR30349 6 216 1.4E-64 T 22-04-2016 PGJ_RS06285 072edc92f5dfe59482a28f1fa42792a4 217 Pfam PF00589 Phage integrase family 41 205 3.7E-18 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS06285 072edc92f5dfe59482a28f1fa42792a4 217 Gene3D G3DSA:1.10.443.10 38 215 3.6E-29 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 3 436 2.8E-186 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 PANTHER PTHR11780 7 443 3.4E-171 T 22-04-2016 PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 Gene3D G3DSA:1.10.1060.10 316 436 5.3E-15 T 22-04-2016 PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 Pfam PF13375 RnfC Barrel sandwich hybrid domain 8 102 1.1E-29 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 Pfam PF10531 SLBB domain 288 336 3.4E-13 T 22-04-2016 IPR019554 Soluble ligand binding domain PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 443 147.918 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 Pfam PF13237 4Fe-4S dicluster domain 362 418 8.8E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 PANTHER PTHR11780:SF1 7 443 3.4E-171 T 22-04-2016 PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 407 418 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 368 379 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 130 276 2.5E-48 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 SUPERFAMILY SSF46548 327 434 3.4E-19 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PGJ_RS07415 88f7f07206a3cf50346795d40cd79626 443 SUPERFAMILY SSF142019 89 294 2.09E-54 T 22-04-2016 PGJ_RS09215 b032ed38c279d753426750588a7779a4 351 Pfam PF01609 Transposase DDE domain 133 338 2.1E-48 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS09215 b032ed38c279d753426750588a7779a4 351 PANTHER PTHR35604 15 167 9.2E-28 T 22-04-2016 PGJ_RS09215 b032ed38c279d753426750588a7779a4 351 PANTHER PTHR35604 193 349 9.2E-28 T 22-04-2016 PGJ_RS09215 b032ed38c279d753426750588a7779a4 351 Pfam PF05598 Transposase domain (DUF772) 49 123 1.1E-22 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 Gene3D G3DSA:3.30.230.10 215 326 7.7E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 128 4.9E-10 T 22-04-2016 PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 3 617 22.66 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 Pfam PF08676 MutL C terminal dimerisation domain 439 571 3.4E-23 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 SUPERFAMILY SSF54211 197 327 8.72E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 SUPERFAMILY SSF118116 438 617 8.63E-26 T 22-04-2016 PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 SUPERFAMILY SSF55874 4 202 1.96E-50 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 4 306 5.2E-89 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 326 3.2E-33 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 SMART SM01340 209 327 1.6E-45 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 PANTHER PTHR10073 5 330 3.7E-130 T 22-04-2016 PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 Gene3D G3DSA:3.30.565.10 5 214 1.9E-69 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 SMART SM00853 436 577 2.0E-20 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 PGJ_RS06950 57c3b91d07a9a6b3f304207ea509d347 618 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 95 101 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site PGJ_RS00240 4e92c42975e9420a49ed463afe640438 394 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 394 31.909 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PGJ_RS00240 4e92c42975e9420a49ed463afe640438 394 PANTHER PTHR11098:SF12 1 391 2.3E-141 T 22-04-2016 PGJ_RS00240 4e92c42975e9420a49ed463afe640438 394 PIRSF PIRSF000484 1 378 1.7E-66 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PGJ_RS00240 4e92c42975e9420a49ed463afe640438 394 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 165 356 1.7E-48 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PGJ_RS00240 4e92c42975e9420a49ed463afe640438 394 PANTHER PTHR11098 1 391 2.3E-141 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PGJ_RS00240 4e92c42975e9420a49ed463afe640438 394 SUPERFAMILY SSF51690 118 387 1.02E-72 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 PGJ_RS00240 4e92c42975e9420a49ed463afe640438 394 SUPERFAMILY SSF54675 3 136 1.85E-33 T 22-04-2016 PGJ_RS00240 4e92c42975e9420a49ed463afe640438 394 Gene3D G3DSA:3.20.140.10 3 376 1.1E-122 T 22-04-2016 PGJ_RS00240 4e92c42975e9420a49ed463afe640438 394 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 3 393 4.7E-175 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PGJ_RS08350 c7fd07fe674ce0015176bc642fc9173e 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 5.7E-9 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08350 c7fd07fe674ce0015176bc642fc9173e 64 SUPERFAMILY SSF46561 1 63 2.62E-15 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08350 c7fd07fe674ce0015176bc642fc9173e 64 Pfam PF00831 Ribosomal L29 protein 4 60 2.4E-15 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08350 c7fd07fe674ce0015176bc642fc9173e 64 Gene3D G3DSA:1.10.287.310 1 63 1.5E-17 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08350 c7fd07fe674ce0015176bc642fc9173e 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 12.705 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS05920 bbb26e546ef5f0cd475336156d1d7543 290 PANTHER PTHR18895 5 281 4.2E-41 T 22-04-2016 PGJ_RS05920 bbb26e546ef5f0cd475336156d1d7543 290 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 40 283 1.0E-42 T 22-04-2016 PGJ_RS05920 bbb26e546ef5f0cd475336156d1d7543 290 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 285 29.085 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PGJ_RS05920 bbb26e546ef5f0cd475336156d1d7543 290 SUPERFAMILY SSF53335 51 280 1.76E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS05920 bbb26e546ef5f0cd475336156d1d7543 290 PANTHER PTHR18895:SF3 5 281 4.2E-41 T 22-04-2016 PGJ_RS05920 bbb26e546ef5f0cd475336156d1d7543 290 Gene3D G3DSA:3.40.50.150 111 280 1.9E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS08645 7580130f0747caf581bcd72505c117bd 113 PANTHER PTHR14552 1 107 1.1E-31 T 22-04-2016 PGJ_RS08645 7580130f0747caf581bcd72505c117bd 113 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 23 100 3.7E-18 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PGJ_RS08645 7580130f0747caf581bcd72505c117bd 113 PANTHER PTHR14552:SF13 1 107 1.1E-31 T 22-04-2016 PGJ_RS08645 7580130f0747caf581bcd72505c117bd 113 Gene3D G3DSA:1.10.287.1080 1 92 1.6E-23 T 22-04-2016 PGJ_RS08645 7580130f0747caf581bcd72505c117bd 113 PIRSF PIRSF029904 1 108 2.1E-47 T 22-04-2016 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD PGJ_RS08645 7580130f0747caf581bcd72505c117bd 113 SUPERFAMILY SSF101386 2 100 1.08E-25 T 22-04-2016 PGJ_RS02235 a5784a9b3cf8e9180fdb946689558110 510 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 393 407 2.6E-15 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PGJ_RS02235 a5784a9b3cf8e9180fdb946689558110 510 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 317 339 2.6E-15 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PGJ_RS02235 a5784a9b3cf8e9180fdb946689558110 510 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 378 392 2.6E-15 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PGJ_RS02235 a5784a9b3cf8e9180fdb946689558110 510 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 84 103 2.6E-15 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PGJ_RS02235 a5784a9b3cf8e9180fdb946689558110 510 SUPERFAMILY SSF56601 60 495 4.23E-59 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS02235 a5784a9b3cf8e9180fdb946689558110 510 PANTHER PTHR30023:SF0 5 503 2.2E-59 T 22-04-2016 PGJ_RS02235 a5784a9b3cf8e9180fdb946689558110 510 Gene3D G3DSA:3.40.710.10 262 495 1.4E-38 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS02235 a5784a9b3cf8e9180fdb946689558110 510 PANTHER PTHR30023 5 503 2.2E-59 T 22-04-2016 PGJ_RS02235 a5784a9b3cf8e9180fdb946689558110 510 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 79 463 6.8E-52 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PGJ_RS02235 a5784a9b3cf8e9180fdb946689558110 510 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 53 482 7.9E-60 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 PANTHER PTHR14911:SF13 255 429 1.6E-58 T 22-04-2016 PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 PANTHER PTHR14911:SF13 6 217 1.6E-58 T 22-04-2016 PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 PANTHER PTHR14911 255 429 1.6E-58 T 22-04-2016 PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 PANTHER PTHR14911 6 217 1.6E-58 T 22-04-2016 PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 Gene3D G3DSA:3.40.50.150 255 369 1.9E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 Gene3D G3DSA:3.40.50.150 152 219 1.9E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 200 211 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 SUPERFAMILY SSF53335 146 222 9.38E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 SUPERFAMILY SSF53335 258 370 9.38E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 Pfam PF02926 THUMP domain 32 158 3.0E-12 T 22-04-2016 IPR004114 THUMP domain GO:0003723 PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 SMART SM00981 61 159 3.7E-17 T 22-04-2016 IPR004114 THUMP domain GO:0003723 PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PGJ_RS02480 b7defdc97ca78057153b0a5c9aaaa1f0 484 Pfam PF01170 Putative RNA methylase family UPF0020 167 370 6.5E-41 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS05435 e4075e73ebffdf838ea600d49d1df18b 371 Gene3D G3DSA:1.20.1090.10 175 371 1.1E-41 T 22-04-2016 PGJ_RS05435 e4075e73ebffdf838ea600d49d1df18b 371 Gene3D G3DSA:3.40.50.1970 59 172 1.3E-26 T 22-04-2016 PGJ_RS05435 e4075e73ebffdf838ea600d49d1df18b 371 PANTHER PTHR11496:SF68 61 371 1.9E-57 T 22-04-2016 PGJ_RS05435 e4075e73ebffdf838ea600d49d1df18b 371 PANTHER PTHR11496 61 371 1.9E-57 T 22-04-2016 PGJ_RS05435 e4075e73ebffdf838ea600d49d1df18b 371 SUPERFAMILY SSF56796 28 370 5.1E-76 T 22-04-2016 PGJ_RS05435 e4075e73ebffdf838ea600d49d1df18b 371 Pfam PF00465 Iron-containing alcohol dehydrogenase 26 363 3.0E-70 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PGJ_RS05435 e4075e73ebffdf838ea600d49d1df18b 371 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 250 270 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PGJ_RS07960 bdf95850922807729ab1a47a97aeae36 271 SUPERFAMILY SSF53756 5 238 1.97E-29 T 22-04-2016 PGJ_RS07960 bdf95850922807729ab1a47a97aeae36 271 PANTHER PTHR12526:SF17 5 245 5.9E-20 T 22-04-2016 PGJ_RS07960 bdf95850922807729ab1a47a97aeae36 271 Pfam PF08323 Starch synthase catalytic domain 5 237 2.8E-51 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 PGJ_RS07960 bdf95850922807729ab1a47a97aeae36 271 PANTHER PTHR12526 5 245 5.9E-20 T 22-04-2016 PGJ_RS03160 b70b4dbf24cf04275c37a0372d3147b7 515 Gene3D G3DSA:3.90.550.10 215 279 1.4E-4 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS03160 b70b4dbf24cf04275c37a0372d3147b7 515 Gene3D G3DSA:3.90.550.10 321 507 1.4E-4 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS03160 b70b4dbf24cf04275c37a0372d3147b7 515 SUPERFAMILY SSF53448 387 509 4.56E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS03160 b70b4dbf24cf04275c37a0372d3147b7 515 SUPERFAMILY SSF53448 163 333 4.56E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS03160 b70b4dbf24cf04275c37a0372d3147b7 515 Pfam PF14134 Domain of unknown function (DUF4301) 8 511 5.2E-217 T 22-04-2016 IPR025393 Domain of unknown function DUF4301 PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 2 473 7.9E-133 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 SMART SM00155 386 413 4.4E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 SMART SM00155 208 235 1.4E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 PANTHER PTHR21248 11 473 1.5E-120 T 22-04-2016 PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 SUPERFAMILY SSF56024 71 302 1.13E-52 T 22-04-2016 PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 Hamap MF_01916 Cardiolipin synthase. 6 473 37.569 T 22-04-2016 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 Gene3D G3DSA:3.30.870.10 105 307 1.2E-46 T 22-04-2016 PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 Pfam PF13091 PLD-like domain 128 240 3.3E-14 T 22-04-2016 IPR025202 Phospholipase D-like domain PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 Pfam PF13091 PLD-like domain 315 439 2.1E-23 T 22-04-2016 IPR025202 Phospholipase D-like domain PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 53 4.0E-10 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 SUPERFAMILY SSF56024 259 458 2.92E-45 T 22-04-2016 PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 PANTHER PTHR21248:SF5 11 473 1.5E-120 T 22-04-2016 PGJ_RS01495 72fe56ffc6eea775e2d69d4e6c2307c4 473 Gene3D G3DSA:3.30.870.10 308 449 2.9E-34 T 22-04-2016 PGJ_RS07635 a21333d97e0ec1843fdac763b780842f 262 PANTHER PTHR32552 14 221 4.2E-40 T 22-04-2016 PGJ_RS07635 a21333d97e0ec1843fdac763b780842f 262 SUPERFAMILY SSF53098 57 224 3.19E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS07635 a21333d97e0ec1843fdac763b780842f 262 PANTHER PTHR32552:SF23 14 221 4.2E-40 T 22-04-2016 PGJ_RS07635 a21333d97e0ec1843fdac763b780842f 262 Pfam PF00665 Integrase core domain 62 181 3.4E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS07635 a21333d97e0ec1843fdac763b780842f 262 Gene3D G3DSA:3.30.420.10 57 219 6.3E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS08460 a21333d97e0ec1843fdac763b780842f 262 PANTHER PTHR32552 14 221 4.2E-40 T 22-04-2016 PGJ_RS08460 a21333d97e0ec1843fdac763b780842f 262 SUPERFAMILY SSF53098 57 224 3.19E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS08460 a21333d97e0ec1843fdac763b780842f 262 PANTHER PTHR32552:SF23 14 221 4.2E-40 T 22-04-2016 PGJ_RS08460 a21333d97e0ec1843fdac763b780842f 262 Pfam PF00665 Integrase core domain 62 181 3.4E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS08460 a21333d97e0ec1843fdac763b780842f 262 Gene3D G3DSA:3.30.420.10 57 219 6.3E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS06150 d4cb9d72941a3ef9067cec71a49055d0 418 PANTHER PTHR30474 1 401 1.7E-77 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PGJ_RS06150 d4cb9d72941a3ef9067cec71a49055d0 418 PANTHER PTHR30474:SF2 1 401 1.7E-77 T 22-04-2016 PGJ_RS06150 d4cb9d72941a3ef9067cec71a49055d0 418 Pfam PF01098 Cell cycle protein 12 383 1.9E-56 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PGJ_RS03235 2f30f9046590be2c77a4ac5ec8ae1a1c 400 SUPERFAMILY SSF56349 127 389 7.95E-34 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS03235 2f30f9046590be2c77a4ac5ec8ae1a1c 400 Pfam PF00589 Phage integrase family 274 380 6.6E-10 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS03235 2f30f9046590be2c77a4ac5ec8ae1a1c 400 PANTHER PTHR30349:SF26 120 399 5.2E-83 T 22-04-2016 PGJ_RS03235 2f30f9046590be2c77a4ac5ec8ae1a1c 400 Pfam PF13102 Phage integrase SAM-like domain 10 168 5.1E-17 T 22-04-2016 IPR025269 Phage integrase SAM-like domain PGJ_RS03235 2f30f9046590be2c77a4ac5ec8ae1a1c 400 PANTHER PTHR30349 120 399 5.2E-83 T 22-04-2016 PGJ_RS03235 2f30f9046590be2c77a4ac5ec8ae1a1c 400 Gene3D G3DSA:1.10.443.10 218 393 2.9E-23 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS02625 5162712d596d64b28d5b7b1e17808094 385 SUPERFAMILY SSF52283 1 178 2.89E-46 T 22-04-2016 PGJ_RS02625 5162712d596d64b28d5b7b1e17808094 385 PANTHER PTHR10160 1 385 7.4E-144 T 22-04-2016 PGJ_RS02625 5162712d596d64b28d5b7b1e17808094 385 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 152 376 7.7E-65 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PGJ_RS02625 5162712d596d64b28d5b7b1e17808094 385 Gene3D G3DSA:3.40.50.1770 198 377 7.8E-29 T 22-04-2016 PGJ_RS02625 5162712d596d64b28d5b7b1e17808094 385 Gene3D G3DSA:3.40.50.1770 3 197 6.2E-64 T 22-04-2016 PGJ_RS02625 5162712d596d64b28d5b7b1e17808094 385 SMART SM01003 4 147 2.0E-59 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PGJ_RS02625 5162712d596d64b28d5b7b1e17808094 385 SMART SM01002 156 321 1.0E-57 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PGJ_RS02625 5162712d596d64b28d5b7b1e17808094 385 SUPERFAMILY SSF51735 147 327 6.84E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02625 5162712d596d64b28d5b7b1e17808094 385 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 147 4.8E-43 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PGJ_RS01040 ddb3926d67379d295b3b851406c197d3 245 TIGRFAM TIGR01200 GLPGLI: GLPGLI family protein 12 221 9.8E-43 T 22-04-2016 IPR005901 GLPGLI family protein PGJ_RS01040 ddb3926d67379d295b3b851406c197d3 245 Pfam PF09697 Protein of unknown function (Porph_ging) 153 178 8.4E-6 T 22-04-2016 IPR005901 GLPGLI family protein PGJ_RS06065 79bf6b807100c5c33078e49758e90de1 405 Pfam PF00925 GTP cyclohydrolase II 214 377 2.3E-70 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PGJ_RS06065 79bf6b807100c5c33078e49758e90de1 405 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 5 399 51.184 T 22-04-2016 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275|UniPathway: UPA00275 PGJ_RS06065 79bf6b807100c5c33078e49758e90de1 405 SUPERFAMILY SSF55821 7 210 2.75E-78 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PGJ_RS06065 79bf6b807100c5c33078e49758e90de1 405 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 6 203 2.4E-68 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS06065 79bf6b807100c5c33078e49758e90de1 405 PIRSF PIRSF001259 5 405 6.3E-166 T 22-04-2016 PGJ_RS06065 79bf6b807100c5c33078e49758e90de1 405 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 215 400 8.4E-74 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PGJ_RS06065 79bf6b807100c5c33078e49758e90de1 405 SUPERFAMILY SSF142695 209 379 1.05E-69 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PGJ_RS06065 79bf6b807100c5c33078e49758e90de1 405 PANTHER PTHR21327 1 402 1.1E-216 T 22-04-2016 PGJ_RS06065 79bf6b807100c5c33078e49758e90de1 405 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 10 202 3.9E-78 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS06065 79bf6b807100c5c33078e49758e90de1 405 PANTHER PTHR21327:SF6 1 402 1.1E-216 T 22-04-2016 PGJ_RS06065 79bf6b807100c5c33078e49758e90de1 405 Gene3D G3DSA:3.90.870.10 2 213 6.6E-90 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PGJ_RS06065 79bf6b807100c5c33078e49758e90de1 405 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 208 403 39.479 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PGJ_RS04455 91b54b549ff651cec5ea323f635b2949 442 PANTHER PTHR41312 2 287 3.5E-37 T 22-04-2016 PGJ_RS04455 91b54b549ff651cec5ea323f635b2949 442 PANTHER PTHR41312 307 442 3.5E-37 T 22-04-2016 PGJ_RS04455 91b54b549ff651cec5ea323f635b2949 442 Gene3D G3DSA:3.40.190.10 46 157 4.7E-42 T 22-04-2016 PGJ_RS04455 91b54b549ff651cec5ea323f635b2949 442 Pfam PF12698 ABC-2 family transporter protein 19 416 3.7E-53 T 22-04-2016 PGJ_RS04455 91b54b549ff651cec5ea323f635b2949 442 SUPERFAMILY SSF53850 48 180 3.15E-36 T 22-04-2016 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 Gene3D G3DSA:3.40.250.10 441 543 3.4E-26 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 SUPERFAMILY SSF51905 1 316 3.96E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 Gene3D G3DSA:3.50.50.60 109 316 8.4E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 SUPERFAMILY SSF52821 436 543 1.1E-26 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 Pfam PF00581 Rhodanese-like domain 466 543 4.5E-14 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 Gene3D G3DSA:3.50.50.60 1 108 9.6E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 Pfam PF01206 Sulfurtransferase TusA 575 643 1.1E-19 T 22-04-2016 IPR001455 TusA-like domain PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 Gene3D G3DSA:3.30.110.40 575 643 4.2E-26 T 22-04-2016 IPR001455 TusA-like domain PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 7.6E-15 T 22-04-2016 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 7.6E-15 T 22-04-2016 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 7.6E-15 T 22-04-2016 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 7.6E-15 T 22-04-2016 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 Gene3D G3DSA:3.30.390.30 336 440 2.0E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 SUPERFAMILY SSF64307 567 643 1.83E-19 T 22-04-2016 IPR001455 TusA-like domain PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 PANTHER PTHR22912 1 442 8.0E-176 T 22-04-2016 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 Gene3D G3DSA:3.40.1260.10 657 813 2.5E-57 T 22-04-2016 IPR027396 DsrEFH-like PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 PANTHER PTHR22912:SF140 1 442 8.0E-176 T 22-04-2016 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 6.0E-22 T 22-04-2016 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 6.0E-22 T 22-04-2016 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 6.0E-22 T 22-04-2016 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 6.0E-22 T 22-04-2016 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 6.0E-22 T 22-04-2016 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 Pfam PF13686 DsrE/DsrF/DrsH-like family 660 812 2.4E-59 T 22-04-2016 IPR032836 DsrE/DsrF/DrsH-like family PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 SUPERFAMILY SSF55424 324 446 2.41E-28 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 284 1.2E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 SUPERFAMILY SSF75169 755 811 1.62E-21 T 22-04-2016 IPR027396 DsrEFH-like PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 SUPERFAMILY SSF75169 662 705 1.62E-21 T 22-04-2016 IPR027396 DsrEFH-like PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 576 600 - T 22-04-2016 IPR001455 TusA-like domain PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 331 433 7.1E-11 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PGJ_RS00795 9cd5f1dd63c8ef21101d1ca3062b0067 813 SMART SM00450 453 549 1.5E-23 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS06585 5692e47321bde5cb017dbd665d68dfb7 446 PANTHER PTHR20992 1 332 4.0E-72 T 22-04-2016 PGJ_RS06585 5692e47321bde5cb017dbd665d68dfb7 446 PANTHER PTHR20992:SF9 1 332 4.0E-72 T 22-04-2016 PGJ_RS06585 5692e47321bde5cb017dbd665d68dfb7 446 Pfam PF04087 Domain of unknown function (DUF389) 61 197 1.2E-41 T 22-04-2016 IPR005240 Protein of unknown function DUF389 PGJ_RS02720 84cd34019e6111324463f590c71a8366 164 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 3 154 5.2E-16 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 PGJ_RS02720 84cd34019e6111324463f590c71a8366 164 PANTHER PTHR11124 1 163 1.7E-20 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 PGJ_RS02720 84cd34019e6111324463f590c71a8366 164 Gene3D G3DSA:3.60.21.10 3 155 1.6E-25 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS02720 84cd34019e6111324463f590c71a8366 164 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 145 1.4E-22 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type PGJ_RS02720 84cd34019e6111324463f590c71a8366 164 SUPERFAMILY SSF56300 1 159 2.28E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS02075 da83101031205c5c182da45864fea231 285 Pfam PF04321 RmlD substrate binding domain 3 282 8.3E-105 T 22-04-2016 IPR029903 RmlD-like substrate binding domain PGJ_RS02075 da83101031205c5c182da45864fea231 285 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 281 1.0E-94 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family PGJ_RS02075 da83101031205c5c182da45864fea231 285 PANTHER PTHR10491:SF4 1 281 1.9E-104 T 22-04-2016 PGJ_RS02075 da83101031205c5c182da45864fea231 285 SUPERFAMILY SSF51735 1 282 2.58E-98 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02075 da83101031205c5c182da45864fea231 285 Gene3D G3DSA:3.90.25.10 214 267 1.3E-28 T 22-04-2016 PGJ_RS02075 da83101031205c5c182da45864fea231 285 Gene3D G3DSA:3.40.50.720 1 193 1.7E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02075 da83101031205c5c182da45864fea231 285 PANTHER PTHR10491 1 281 1.9E-104 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family PGJ_RS04640 9f4ab78a6f51d4c4cfd1e4d91aed8c4f 741 Gene3D G3DSA:2.70.98.10 29 332 4.9E-83 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PGJ_RS04640 9f4ab78a6f51d4c4cfd1e4d91aed8c4f 741 Pfam PF07971 Glycosyl hydrolase family 92 252 733 1.9E-150 T 22-04-2016 IPR012939 Glycosyl hydrolase family 92 PGJ_RS04640 9f4ab78a6f51d4c4cfd1e4d91aed8c4f 741 Gene3D G3DSA:3.30.2080.10 601 738 2.0E-58 T 22-04-2016 PGJ_RS04640 9f4ab78a6f51d4c4cfd1e4d91aed8c4f 741 PANTHER PTHR12143 6 381 5.8E-178 T 22-04-2016 PGJ_RS04640 9f4ab78a6f51d4c4cfd1e4d91aed8c4f 741 PANTHER PTHR12143 398 735 5.8E-178 T 22-04-2016 PGJ_RS04640 9f4ab78a6f51d4c4cfd1e4d91aed8c4f 741 Gene3D G3DSA:1.20.1050.60 357 446 2.0E-26 T 22-04-2016 PGJ_RS04640 9f4ab78a6f51d4c4cfd1e4d91aed8c4f 741 SUPERFAMILY SSF48208 271 725 7.99E-27 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PGJ_RS04640 9f4ab78a6f51d4c4cfd1e4d91aed8c4f 741 Gene3D G3DSA:1.20.1610.10 448 600 2.8E-54 T 22-04-2016 PGJ_RS04640 9f4ab78a6f51d4c4cfd1e4d91aed8c4f 741 PANTHER PTHR12143:SF22 6 381 5.8E-178 T 22-04-2016 PGJ_RS04640 9f4ab78a6f51d4c4cfd1e4d91aed8c4f 741 PANTHER PTHR12143:SF22 398 735 5.8E-178 T 22-04-2016 PGJ_RS04640 9f4ab78a6f51d4c4cfd1e4d91aed8c4f 741 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 1 738 0.0 T 22-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 Pfam PF00710 Asparaginase, N-terminal 12 201 1.3E-62 T 22-04-2016 IPR027474 L-asparaginase, N-terminal PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 PANTHER PTHR11707 9 348 1.7E-138 T 22-04-2016 PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 14 22 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 PRINTS PR00139 Asparaginase/glutaminase family signature 272 290 4.5E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 PRINTS PR00139 Asparaginase/glutaminase family signature 88 106 4.5E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 PRINTS PR00139 Asparaginase/glutaminase family signature 12 23 4.5E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 PIRSF PIRSF500176 9 344 6.0E-96 T 22-04-2016 PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 PIRSF PIRSF001220 7 346 2.9E-91 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 89 99 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 Gene3D G3DSA:3.40.50.40 221 348 1.2E-47 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 11 347 1.2E-93 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 SMART SM00870 11 335 2.7E-122 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 PANTHER PTHR11707:SF28 9 348 1.7E-138 T 22-04-2016 PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 Gene3D G3DSA:3.40.50.1170 9 220 2.1E-73 T 22-04-2016 IPR027474 L-asparaginase, N-terminal PGJ_RS09515 f271606297011feb49ad4607edfca57a 359 SUPERFAMILY SSF53774 10 347 5.23E-106 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 PANTHER PTHR11692 3 505 2.4E-233 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 Pfam PF02142 MGS-like domain 18 130 1.2E-16 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 5 505 37.485 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 Gene3D G3DSA:3.40.50.1380 5 189 4.4E-63 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 SMART SM00798 136 437 3.5E-140 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 PIRSF PIRSF000414 1 505 3.4E-182 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 SMART SM00851 17 131 4.5E-36 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 SUPERFAMILY SSF52335 5 195 9.16E-54 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 SUPERFAMILY SSF53927 210 505 2.31E-108 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 PANTHER PTHR11692:SF2 3 505 2.4E-233 T 22-04-2016 PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 Pfam PF01808 AICARFT/IMPCHase bienzyme 136 436 1.5E-95 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 Gene3D G3DSA:3.40.140.20 233 345 2.2E-39 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PGJ_RS02335 04fd0e82cc5f7f13f47925a0b31d4b0f 505 Gene3D G3DSA:3.40.140.20 352 495 4.8E-47 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PGJ_RS04710 34b9b19aa2c6ab831d0d773dcc692b13 416 SUPERFAMILY SSF53756 3 412 2.24E-22 T 22-04-2016 PGJ_RS04710 34b9b19aa2c6ab831d0d773dcc692b13 416 Pfam PF13439 Glycosyltransferase Family 4 20 211 4.3E-8 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 400 418 3.9E-89 T 22-04-2016 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 113 136 3.9E-89 T 22-04-2016 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 177 200 3.9E-89 T 22-04-2016 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 151 176 3.9E-89 T 22-04-2016 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 3.9E-89 T 22-04-2016 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 3.9E-89 T 22-04-2016 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 20 38 3.9E-89 T 22-04-2016 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 3.9E-89 T 22-04-2016 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 72 92 3.9E-89 T 22-04-2016 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 ProSitePatterns PS00755 Protein secY signature 1. 73 92 - T 22-04-2016 IPR030659 SecY conserved site PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 Pfam PF00344 SecY translocase 73 414 9.0E-112 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 17 425 5.7E-116 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 PANTHER PTHR10906:SF2 4 445 9.4E-187 T 22-04-2016 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 PIRSF PIRSF004557 1 438 6.9E-120 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 ProSitePatterns PS00756 Protein secY signature 2. 170 187 - T 22-04-2016 IPR030659 SecY conserved site PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 Hamap MF_01465 Protein translocase subunit SecY [secY]. 7 431 28.611 T 22-04-2016 IPR026593 Protein translocase subunit SecY PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 Gene3D G3DSA:1.10.3370.10 4 435 5.2E-153 T 22-04-2016 IPR023201 SecY subunit domain PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 PANTHER PTHR10906 4 445 9.4E-187 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PGJ_RS08290 08179885b28f07627e25bb06dcc7409e 446 SUPERFAMILY SSF103491 3 422 2.09E-115 T 22-04-2016 IPR023201 SecY subunit domain PGJ_RS07090 b2e3d2ee04a3ecaacdb2f91f7afd9a26 439 SMART SM00228 211 278 1.5E-4 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS07090 b2e3d2ee04a3ecaacdb2f91f7afd9a26 439 PANTHER PTHR22939:SF78 90 96 5.3E-36 T 22-04-2016 PGJ_RS07090 b2e3d2ee04a3ecaacdb2f91f7afd9a26 439 PANTHER PTHR22939:SF78 216 439 5.3E-36 T 22-04-2016 PGJ_RS07090 b2e3d2ee04a3ecaacdb2f91f7afd9a26 439 SUPERFAMILY SSF50156 221 300 1.45E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS07090 b2e3d2ee04a3ecaacdb2f91f7afd9a26 439 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 436 5.5E-68 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 PGJ_RS07090 b2e3d2ee04a3ecaacdb2f91f7afd9a26 439 Gene3D G3DSA:2.30.42.10 215 287 6.5E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS07090 b2e3d2ee04a3ecaacdb2f91f7afd9a26 439 Gene3D G3DSA:2.30.42.10 103 195 1.2E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS07090 b2e3d2ee04a3ecaacdb2f91f7afd9a26 439 Pfam PF02163 Peptidase family M50 11 425 2.6E-53 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 PGJ_RS07090 b2e3d2ee04a3ecaacdb2f91f7afd9a26 439 SUPERFAMILY SSF50156 108 200 6.26E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS07090 b2e3d2ee04a3ecaacdb2f91f7afd9a26 439 Pfam PF13180 PDZ domain 223 286 5.4E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS07090 b2e3d2ee04a3ecaacdb2f91f7afd9a26 439 PANTHER PTHR22939 90 96 5.3E-36 T 22-04-2016 PGJ_RS07090 b2e3d2ee04a3ecaacdb2f91f7afd9a26 439 PANTHER PTHR22939 216 439 5.3E-36 T 22-04-2016 PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 Pfam PF00206 Lyase 18 346 1.3E-87 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 Gene3D G3DSA:1.10.275.10 6 143 2.6E-51 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 Pfam PF10415 Fumarase C C-terminus 412 464 3.4E-21 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 PRINTS PR00149 Fumarate lyase superfamily signature 275 302 2.9E-25 T 22-04-2016 IPR000362 Fumarate lyase family PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 2.9E-25 T 22-04-2016 IPR000362 Fumarate lyase family PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 PRINTS PR00149 Fumarate lyase superfamily signature 321 337 2.9E-25 T 22-04-2016 IPR000362 Fumarate lyase family PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 2.9E-25 T 22-04-2016 IPR000362 Fumarate lyase family PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 PANTHER PTHR11444 1 466 3.8E-255 T 22-04-2016 IPR000362 Fumarate lyase family PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 SUPERFAMILY SSF48557 7 467 9.72E-137 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 PANTHER PTHR11444:SF25 1 466 3.8E-255 T 22-04-2016 PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 ProSitePatterns PS00163 Fumarate lyases signature. 321 330 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 Gene3D G3DSA:1.10.40.30 412 467 1.2E-22 T 22-04-2016 PGJ_RS01245 57b9992eec27f41e01d3c6ec1c76b573 475 Gene3D G3DSA:1.20.200.10 144 406 6.0E-80 T 22-04-2016 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 Gene3D G3DSA:3.30.56.20 413 486 7.8E-21 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 Gene3D G3DSA:2.40.50.140 45 159 8.5E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 819 6.8E-288 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 SMART SM00874 414 483 2.7E-21 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 Pfam PF01588 Putative tRNA binding domain 48 151 2.3E-23 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 Gene3D G3DSA:3.30.70.380 728 819 3.4E-30 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 SUPERFAMILY SSF46955 414 486 1.83E-15 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 Pfam PF03484 tRNA synthetase B5 domain 417 483 1.7E-15 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 SUPERFAMILY SSF54991 722 819 7.06E-29 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 Pfam PF03483 B3/4 domain 224 398 3.4E-66 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 Gene3D G3DSA:3.30.930.10 504 712 4.9E-44 T 22-04-2016 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 813 44.655 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 Pfam PF03147 Ferredoxin-fold anticodon binding domain 726 819 5.2E-29 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 Gene3D G3DSA:3.30.56.10 162 191 4.2E-22 T 22-04-2016 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 Gene3D G3DSA:3.30.56.10 1 38 4.2E-22 T 22-04-2016 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 SUPERFAMILY SSF55681 479 712 1.59E-32 T 22-04-2016 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 PANTHER PTHR10947 2 819 1.5E-267 T 22-04-2016 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 PANTHER PTHR10947:SF0 2 819 1.5E-267 T 22-04-2016 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 SMART SM00896 726 819 2.5E-42 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 SUPERFAMILY SSF50249 39 197 1.79E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 SUPERFAMILY SSF56037 210 407 5.49E-72 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 Gene3D G3DSA:3.50.40.10 211 404 1.5E-80 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PGJ_RS00430 fbeaf1d54c6bc3f596835b7150b3c281 819 SMART SM00873 224 398 1.8E-90 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PGJ_RS06820 7b6359498c38501ee6d4ee04898e4d5a 343 PANTHER PTHR18968 11 342 6.5E-130 T 22-04-2016 PGJ_RS06820 7b6359498c38501ee6d4ee04898e4d5a 343 SUPERFAMILY SSF52518 20 343 3.17E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS06820 7b6359498c38501ee6d4ee04898e4d5a 343 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 56 203 1.7E-26 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PGJ_RS06820 7b6359498c38501ee6d4ee04898e4d5a 343 Gene3D G3DSA:3.40.50.970 21 245 7.2E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS06820 7b6359498c38501ee6d4ee04898e4d5a 343 PANTHER PTHR18968:SF89 11 342 6.5E-130 T 22-04-2016 PGJ_RS05945 bba14f8cf37ee1bc0fa1e87f415a4957 238 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 237 5.6E-110 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PGJ_RS05945 bba14f8cf37ee1bc0fa1e87f415a4957 238 Gene3D G3DSA:3.20.20.70 1 236 5.5E-93 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS05945 bba14f8cf37ee1bc0fa1e87f415a4957 238 PANTHER PTHR30456:SF0 1 237 3.0E-108 T 22-04-2016 PGJ_RS05945 bba14f8cf37ee1bc0fa1e87f415a4957 238 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 234 1.3E-92 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PGJ_RS05945 bba14f8cf37ee1bc0fa1e87f415a4957 238 PANTHER PTHR30456 1 237 3.0E-108 T 22-04-2016 PGJ_RS05945 bba14f8cf37ee1bc0fa1e87f415a4957 238 SUPERFAMILY SSF63892 1 236 8.11E-87 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PGJ_RS05945 bba14f8cf37ee1bc0fa1e87f415a4957 238 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 238 89.601 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PGJ_RS05595 d76abcd27b6c4c03f3724185b694fae9 432 PANTHER PTHR11228:SF5 55 396 3.0E-26 T 22-04-2016 PGJ_RS05595 d76abcd27b6c4c03f3724185b694fae9 432 PANTHER PTHR11228 55 396 3.0E-26 T 22-04-2016 PGJ_RS05595 d76abcd27b6c4c03f3724185b694fae9 432 Gene3D G3DSA:3.20.20.70 93 392 2.2E-26 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS05595 d76abcd27b6c4c03f3724185b694fae9 432 SUPERFAMILY SSF102114 93 388 5.1E-24 T 22-04-2016 PGJ_RS05595 d76abcd27b6c4c03f3724185b694fae9 432 Pfam PF04055 Radical SAM superfamily 94 210 2.9E-12 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS05595 d76abcd27b6c4c03f3724185b694fae9 432 Pfam PF13353 4Fe-4S single cluster domain 98 223 5.7E-6 T 22-04-2016 PGJ_RS06130 b62fad6a52a10530f01bc8f0216cc233 476 SUPERFAMILY SSF53067 198 347 6.79E-22 T 22-04-2016 PGJ_RS06130 b62fad6a52a10530f01bc8f0216cc233 476 PANTHER PTHR32432 2 451 6.7E-50 T 22-04-2016 PGJ_RS06130 b62fad6a52a10530f01bc8f0216cc233 476 Gene3D G3DSA:3.30.420.40 292 343 1.1E-14 T 22-04-2016 PGJ_RS06130 b62fad6a52a10530f01bc8f0216cc233 476 Gene3D G3DSA:3.30.420.40 196 233 1.1E-14 T 22-04-2016 PGJ_RS06130 b62fad6a52a10530f01bc8f0216cc233 476 Gene3D G3DSA:3.30.420.40 2 139 7.4E-15 T 22-04-2016 PGJ_RS06130 b62fad6a52a10530f01bc8f0216cc233 476 PIRSF PIRSF003101 1 451 6.3E-66 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 PGJ_RS06130 b62fad6a52a10530f01bc8f0216cc233 476 PANTHER PTHR32432:SF4 2 451 6.7E-50 T 22-04-2016 PGJ_RS06130 b62fad6a52a10530f01bc8f0216cc233 476 SUPERFAMILY SSF53067 4 193 1.65E-26 T 22-04-2016 PGJ_RS06130 b62fad6a52a10530f01bc8f0216cc233 476 SMART SM00842 5 195 3.1E-39 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 PGJ_RS06130 b62fad6a52a10530f01bc8f0216cc233 476 Pfam PF14450 Cell division protein FtsA 207 346 1.1E-11 T 22-04-2016 PGJ_RS06130 b62fad6a52a10530f01bc8f0216cc233 476 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 470 19.303 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 PGJ_RS05695 f0baf0333587f279b2cfe9e5ceb77ddd 207 Pfam PF04335 VirB8 protein 17 196 8.8E-5 T 22-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 PGJ_RS05695 f0baf0333587f279b2cfe9e5ceb77ddd 207 TIGRFAM TIGR03781 Bac_Flav_CT_K: Bacteroides conjugative transposon TraK protein 6 207 6.4E-108 T 22-04-2016 IPR022276 Conjugative transposon, TraK PGJ_RS03510 f841ec9c0a2a4e1396ac0195cdd0fba6 214 Pfam PF01144 Coenzyme A transferase 8 213 1.0E-65 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PGJ_RS03510 f841ec9c0a2a4e1396ac0195cdd0fba6 214 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 6 213 6.7E-64 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 PGJ_RS03510 f841ec9c0a2a4e1396ac0195cdd0fba6 214 SMART SM00882 4 214 1.0E-67 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PGJ_RS03510 f841ec9c0a2a4e1396ac0195cdd0fba6 214 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 16 31 - T 22-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 PGJ_RS03510 f841ec9c0a2a4e1396ac0195cdd0fba6 214 Gene3D G3DSA:3.40.1080.10 1 213 1.3E-79 T 22-04-2016 PGJ_RS03510 f841ec9c0a2a4e1396ac0195cdd0fba6 214 SUPERFAMILY SSF100950 2 213 7.78E-75 T 22-04-2016 PGJ_RS03510 f841ec9c0a2a4e1396ac0195cdd0fba6 214 PANTHER PTHR13707 1 214 6.2E-92 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PGJ_RS01220 8728e2a34e3b3886ff85682c77f96beb 198 Gene3D G3DSA:3.90.470.20 93 136 2.7E-9 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PGJ_RS01220 8728e2a34e3b3886ff85682c77f96beb 198 SUPERFAMILY SSF56214 83 150 2.35E-11 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PGJ_RS01220 8728e2a34e3b3886ff85682c77f96beb 198 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 83 147 9.4E-11 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PGJ_RS01220 8728e2a34e3b3886ff85682c77f96beb 198 Gene3D G3DSA:3.90.470.20 40 92 1.3E-5 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 PANTHER PTHR11596 29 394 1.6E-97 T 22-04-2016 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 SMART SM00098 31 471 3.8E-14 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 Pfam PF00245 Alkaline phosphatase 31 461 7.6E-63 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 SUPERFAMILY SSF53649 9 385 6.76E-98 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 SUPERFAMILY SSF53649 412 471 6.76E-98 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 PRINTS PR00113 Alkaline phosphatase signature 135 155 7.0E-27 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 PRINTS PR00113 Alkaline phosphatase signature 179 189 7.0E-27 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 PRINTS PR00113 Alkaline phosphatase signature 30 50 7.0E-27 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 PRINTS PR00113 Alkaline phosphatase signature 244 273 7.0E-27 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 PANTHER PTHR11596:SF51 421 524 1.6E-97 T 22-04-2016 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 PANTHER PTHR11596:SF51 29 394 1.6E-97 T 22-04-2016 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 Gene3D G3DSA:3.40.720.10 390 472 4.7E-94 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 Gene3D G3DSA:3.40.720.10 22 357 4.7E-94 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PGJ_RS04690 2380423db5cd4ef7c03d6c923f6cc6f1 560 PANTHER PTHR11596 421 524 1.6E-97 T 22-04-2016 PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 45.32 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 Gene3D G3DSA:2.30.30.30 119 195 9.1E-33 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 249 4.9E-53 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 1.3E-120 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 SMART SM01382 124 251 5.9E-84 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 7.7E-30 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 Gene3D G3DSA:2.40.50.140 1 113 1.3E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 SUPERFAMILY SSF50249 3 122 2.12E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 SUPERFAMILY SSF50104 126 271 2.11E-56 T 22-04-2016 IPR008991 Translation protein SH3-like domain PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 PANTHER PTHR13691:SF5 1 274 3.3E-135 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 SMART SM01383 42 118 3.5E-43 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 Gene3D G3DSA:4.10.950.10 196 273 3.7E-30 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 PANTHER PTHR13691 1 274 3.3E-135 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 PIRSF PIRSF002158 12 274 5.3E-94 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08375 1684fda3e657dc5ca025f74cf8b94e9d 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 PGJ_RS08320 149a8b026c7d29c88eaf3ce1a6979ce4 131 Gene3D G3DSA:3.30.1490.10 75 131 2.4E-30 T 22-04-2016 PGJ_RS08320 149a8b026c7d29c88eaf3ce1a6979ce4 131 Gene3D G3DSA:3.30.1370.30 1 69 6.0E-27 T 22-04-2016 PGJ_RS08320 149a8b026c7d29c88eaf3ce1a6979ce4 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 131 29.362 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08320 149a8b026c7d29c88eaf3ce1a6979ce4 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08320 149a8b026c7d29c88eaf3ce1a6979ce4 131 Pfam PF00410 Ribosomal protein S8 3 131 1.2E-50 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08320 149a8b026c7d29c88eaf3ce1a6979ce4 131 SUPERFAMILY SSF56047 1 131 6.41E-47 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08320 149a8b026c7d29c88eaf3ce1a6979ce4 131 PANTHER PTHR11758 1 131 4.2E-56 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 PANTHER PTHR30053 1 187 2.0E-77 T 22-04-2016 PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 2.9E-24 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 SMART SM01185 67 122 2.3E-19 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 SUPERFAMILY SSF50249 65 127 9.42E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 2.6E-71 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 Gene3D G3DSA:2.40.50.140 64 127 1.7E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 PIRSF PIRSF005901 1 187 7.7E-59 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 SUPERFAMILY SSF50249 129 186 1.03E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 115 4.8E-16 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 SMART SM00841 130 185 9.6E-33 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 Hamap MF_00141 Elongation factor P [efp]. 1 186 44.234 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 5.5E-27 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 SUPERFAMILY SSF50104 1 63 2.89E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 Gene3D G3DSA:2.30.30.30 1 63 3.7E-29 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 PGJ_RS02870 763d13f2d21b665f53df449108003d83 188 Gene3D G3DSA:2.40.50.140 129 186 7.2E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 PANTHER PTHR30053 1 187 2.0E-77 T 22-04-2016 PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 2.9E-24 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 SMART SM01185 67 122 2.3E-19 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 SUPERFAMILY SSF50249 65 127 9.42E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 2.6E-71 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 Gene3D G3DSA:2.40.50.140 64 127 1.7E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 PIRSF PIRSF005901 1 187 7.7E-59 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 SUPERFAMILY SSF50249 129 186 1.03E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 115 4.8E-16 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 SMART SM00841 130 185 9.6E-33 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 Hamap MF_00141 Elongation factor P [efp]. 1 186 44.234 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 5.5E-27 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 SUPERFAMILY SSF50104 1 63 2.89E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 Gene3D G3DSA:2.30.30.30 1 63 3.7E-29 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 PGJ_RS06200 763d13f2d21b665f53df449108003d83 188 Gene3D G3DSA:2.40.50.140 129 186 7.2E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS06170 4fd6d8f6874ce1d1c505f76dd6e085cd 733 Pfam PF03717 Penicillin-binding Protein dimerisation domain 63 242 1.2E-23 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PGJ_RS06170 4fd6d8f6874ce1d1c505f76dd6e085cd 733 SUPERFAMILY SSF54184 679 731 1.44E-9 T 22-04-2016 PGJ_RS06170 4fd6d8f6874ce1d1c505f76dd6e085cd 733 SUPERFAMILY SSF56601 214 618 6.8E-72 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS06170 4fd6d8f6874ce1d1c505f76dd6e085cd 733 Pfam PF03793 PASTA domain 679 732 8.8E-11 T 22-04-2016 IPR005543 PASTA domain PGJ_RS06170 4fd6d8f6874ce1d1c505f76dd6e085cd 733 SMART SM00740 674 733 1.1E-4 T 22-04-2016 IPR005543 PASTA domain PGJ_RS06170 4fd6d8f6874ce1d1c505f76dd6e085cd 733 PANTHER PTHR30627 2 641 1.3E-111 T 22-04-2016 PGJ_RS06170 4fd6d8f6874ce1d1c505f76dd6e085cd 733 PANTHER PTHR30627:SF1 2 641 1.3E-111 T 22-04-2016 PGJ_RS06170 4fd6d8f6874ce1d1c505f76dd6e085cd 733 Pfam PF00905 Penicillin binding protein transpeptidase domain 285 600 4.7E-48 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PGJ_RS06170 4fd6d8f6874ce1d1c505f76dd6e085cd 733 Gene3D G3DSA:3.40.710.10 267 606 1.3E-72 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS06170 4fd6d8f6874ce1d1c505f76dd6e085cd 733 Gene3D G3DSA:3.90.1310.10 181 266 5.3E-13 T 22-04-2016 PGJ_RS06170 4fd6d8f6874ce1d1c505f76dd6e085cd 733 SUPERFAMILY SSF56519 63 258 4.45E-16 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PGJ_RS04315 83e2283640769ceda227d4b12d87cea4 313 Gene3D G3DSA:3.30.200.20 8 106 6.4E-39 T 22-04-2016 PGJ_RS04315 83e2283640769ceda227d4b12d87cea4 313 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 15 289 23.101 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PGJ_RS04315 83e2283640769ceda227d4b12d87cea4 313 PANTHER PTHR11609 7 313 2.3E-99 T 22-04-2016 PGJ_RS04315 83e2283640769ceda227d4b12d87cea4 313 PANTHER PTHR11609:SF9 7 313 2.3E-99 T 22-04-2016 PGJ_RS04315 83e2283640769ceda227d4b12d87cea4 313 ProSitePatterns PS01058 SAICAR synthetase signature 2. 196 204 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PGJ_RS04315 83e2283640769ceda227d4b12d87cea4 313 Pfam PF01259 SAICAR synthetase 17 258 3.6E-86 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PGJ_RS04315 83e2283640769ceda227d4b12d87cea4 313 ProSitePatterns PS01057 SAICAR synthetase signature 1. 95 109 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PGJ_RS04315 83e2283640769ceda227d4b12d87cea4 313 Gene3D G3DSA:3.30.470.20 107 233 2.2E-51 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PGJ_RS04315 83e2283640769ceda227d4b12d87cea4 313 SUPERFAMILY SSF56104 8 292 5.56E-93 T 22-04-2016 PGJ_RS04680 b38b978d63342411443781507252a44e 230 SUPERFAMILY SSF102712 128 202 2.35E-5 T 22-04-2016 PGJ_RS04680 b38b978d63342411443781507252a44e 230 TIGRFAM TIGR00608 radc: DNA repair protein RadC 14 230 3.0E-56 T 22-04-2016 IPR001405 RadC protein PGJ_RS04680 b38b978d63342411443781507252a44e 230 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 178 183 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site PGJ_RS04680 b38b978d63342411443781507252a44e 230 PANTHER PTHR30471 1 230 1.8E-81 T 22-04-2016 PGJ_RS04680 b38b978d63342411443781507252a44e 230 PANTHER PTHR30471:SF3 1 230 1.8E-81 T 22-04-2016 PGJ_RS04680 b38b978d63342411443781507252a44e 230 Pfam PF04002 RadC-like JAB domain 109 229 1.0E-39 T 22-04-2016 IPR025657 RadC-like JAB domain PGJ_RS04680 b38b978d63342411443781507252a44e 230 Gene3D G3DSA:3.40.140.10 105 230 4.6E-41 T 22-04-2016 PGJ_RS00100 596ff2d2af88f1dbae4223652d1dea2c 219 Gene3D G3DSA:3.90.850.10 2 218 4.0E-63 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PGJ_RS00100 596ff2d2af88f1dbae4223652d1dea2c 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 2 209 4.2E-42 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PGJ_RS00100 596ff2d2af88f1dbae4223652d1dea2c 219 PANTHER PTHR11820 2 211 2.1E-61 T 22-04-2016 PGJ_RS00100 596ff2d2af88f1dbae4223652d1dea2c 219 SUPERFAMILY SSF56529 2 216 2.22E-55 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PGJ_RS06705 7a74560f376e4e1dd57ac7072cdda550 429 PIRSF PIRSF001563 4 429 1.2E-112 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 PGJ_RS06705 7a74560f376e4e1dd57ac7072cdda550 429 PANTHER PTHR11136:SF0 24 428 8.9E-117 T 22-04-2016 PGJ_RS06705 7a74560f376e4e1dd57ac7072cdda550 429 PANTHER PTHR11136 24 428 8.9E-117 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 PGJ_RS06705 7a74560f376e4e1dd57ac7072cdda550 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 427 1.7E-126 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 PGJ_RS06705 7a74560f376e4e1dd57ac7072cdda550 429 Gene3D G3DSA:3.90.190.20 300 428 7.2E-28 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS06705 7a74560f376e4e1dd57ac7072cdda550 429 Gene3D G3DSA:3.40.1190.10 1 293 9.2E-89 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06705 7a74560f376e4e1dd57ac7072cdda550 429 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 142 157 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 PGJ_RS06705 7a74560f376e4e1dd57ac7072cdda550 429 Pfam PF08245 Mur ligase middle domain 52 193 3.7E-11 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06705 7a74560f376e4e1dd57ac7072cdda550 429 SUPERFAMILY SSF53244 299 427 2.98E-22 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS06705 7a74560f376e4e1dd57ac7072cdda550 429 SUPERFAMILY SSF53623 2 293 1.57E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS01200 cc0b3d0639887303f8eb36ad3c101899 254 PANTHER PTHR22748 1 254 2.3E-123 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PGJ_RS01200 cc0b3d0639887303f8eb36ad3c101899 254 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 252 9.7E-97 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PGJ_RS01200 cc0b3d0639887303f8eb36ad3c101899 254 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 188 203 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PGJ_RS01200 cc0b3d0639887303f8eb36ad3c101899 254 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 252 1.4E-92 T 22-04-2016 PGJ_RS01200 cc0b3d0639887303f8eb36ad3c101899 254 SUPERFAMILY SSF56219 1 252 7.85E-85 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PGJ_RS01200 cc0b3d0639887303f8eb36ad3c101899 254 Gene3D G3DSA:3.60.10.10 1 252 7.5E-101 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PGJ_RS01200 cc0b3d0639887303f8eb36ad3c101899 254 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 245 1.4E-31 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PGJ_RS01200 cc0b3d0639887303f8eb36ad3c101899 254 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PGJ_RS07330 d56386c167d2d0dac5587c5f22398bb0 392 SUPERFAMILY SSF118215 8 381 1.83E-83 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS07330 d56386c167d2d0dac5587c5f22398bb0 392 Pfam PF00375 Sodium:dicarboxylate symporter family 8 381 5.8E-81 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS07330 d56386c167d2d0dac5587c5f22398bb0 392 Gene3D G3DSA:1.10.3860.10 2 386 1.1E-62 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS07330 d56386c167d2d0dac5587c5f22398bb0 392 PRINTS PR00173 Glutamate-aspartate symporter signature 273 299 1.1E-5 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS07330 d56386c167d2d0dac5587c5f22398bb0 392 PRINTS PR00173 Glutamate-aspartate symporter signature 126 148 1.1E-5 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS07330 d56386c167d2d0dac5587c5f22398bb0 392 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.1E-5 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS07330 d56386c167d2d0dac5587c5f22398bb0 392 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 1.1E-5 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS07330 d56386c167d2d0dac5587c5f22398bb0 392 PANTHER PTHR11958:SF53 3 11 9.7E-60 T 22-04-2016 PGJ_RS07330 d56386c167d2d0dac5587c5f22398bb0 392 PANTHER PTHR11958:SF53 116 392 9.7E-60 T 22-04-2016 PGJ_RS07330 d56386c167d2d0dac5587c5f22398bb0 392 PANTHER PTHR11958 3 11 9.7E-60 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS07330 d56386c167d2d0dac5587c5f22398bb0 392 PANTHER PTHR11958 116 392 9.7E-60 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS09795 5a858df25bf02e42b44dd2c0cc6762aa 204 Pfam PF02508 Rnf-Nqr subunit, membrane protein 3 202 5.1E-58 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PGJ_RS09795 5a858df25bf02e42b44dd2c0cc6762aa 204 PIRSF PIRSF006102 1 204 9.3E-57 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PGJ_RS09795 5a858df25bf02e42b44dd2c0cc6762aa 204 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 1 203 3.7E-101 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PGJ_RS09795 5a858df25bf02e42b44dd2c0cc6762aa 204 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 204 27.411 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PGJ_RS09795 5a858df25bf02e42b44dd2c0cc6762aa 204 PANTHER PTHR30335 1 204 7.7E-114 T 22-04-2016 PGJ_RS09795 5a858df25bf02e42b44dd2c0cc6762aa 204 PANTHER PTHR30335:SF1 1 204 7.7E-114 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 PANTHER PTHR32071 8 267 1.3E-142 T 22-04-2016 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 PANTHER PTHR32071 343 417 1.3E-142 T 22-04-2016 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 SUPERFAMILY SSF52540 15 259 1.08E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 Pfam PF00158 Sigma-54 interaction domain 16 183 1.3E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 Gene3D G3DSA:1.10.10.60 370 413 3.4E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 Pfam PF02954 Bacterial regulatory protein, Fis family 373 414 2.7E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 Gene3D G3DSA:3.40.50.300 14 188 1.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 PANTHER PTHR32071:SF23 8 267 1.3E-142 T 22-04-2016 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 PANTHER PTHR32071:SF23 343 417 1.3E-142 T 22-04-2016 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 Gene3D G3DSA:1.10.8.60 189 264 1.0E-21 T 22-04-2016 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 40 53 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 SUPERFAMILY SSF46689 358 417 4.71E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 229 238 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 102 117 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 397 417 8.8E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 380 397 8.8E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PGJ_RS00685 68d6d9e8bc4ad024d8b24ef1f53d0ab2 417 SMART SM00382 36 179 6.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 Pfam PF02142 MGS-like domain 958 1046 2.0E-20 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 Gene3D G3DSA:3.30.1490.20 141 201 7.9E-21 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 Gene3D G3DSA:3.40.50.20 5 108 8.2E-43 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 419 548 6.9E-41 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 329 3.9E-81 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 676 876 9.6E-27 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 4 1057 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 SMART SM01096 416 548 1.6E-62 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 Gene3D G3DSA:3.40.50.1380 934 1074 6.8E-26 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 Gene3D G3DSA:3.30.470.20 669 933 1.9E-84 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 PANTHER PTHR11405 1 1074 0.0 T 22-04-2016 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 Gene3D G3DSA:3.30.470.20 202 395 1.8E-74 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 SMART SM00851 957 1046 2.4E-20 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 PANTHER PTHR11405:SF5 1 1074 0.0 T 22-04-2016 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 712 726 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 SUPERFAMILY SSF52440 559 678 1.21E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 SUPERFAMILY SSF56059 676 935 6.54E-84 T 22-04-2016 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 SUPERFAMILY SSF48108 392 554 1.28E-45 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 202 221 1.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 376 394 1.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 294 323 1.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 237 254 1.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 Gene3D G3DSA:1.10.1030.10 396 538 2.0E-51 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 294 301 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 841 848 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 SUPERFAMILY SSF52440 4 126 4.6E-42 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 SUPERFAMILY SSF56059 128 397 5.13E-96 T 22-04-2016 PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 SUPERFAMILY SSF52335 933 1074 1.03E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain PGJ_RS06365 172d7dd9f88c72522c132107d48a9f3b 1075 Gene3D G3DSA:3.40.50.20 539 665 1.2E-59 T 22-04-2016 IPR016185 Pre-ATP-grasp domain PGJ_RS04015 b8d1c9186b479f85b6fffe92da7a4f42 228 SUPERFAMILY SSF46785 153 224 1.22E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS04015 b8d1c9186b479f85b6fffe92da7a4f42 228 Gene3D G3DSA:2.60.120.10 20 153 2.4E-22 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PGJ_RS04015 b8d1c9186b479f85b6fffe92da7a4f42 228 Gene3D G3DSA:1.10.10.10 158 227 1.7E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS04015 b8d1c9186b479f85b6fffe92da7a4f42 228 PANTHER PTHR24567:SF38 35 227 5.2E-38 T 22-04-2016 PGJ_RS04015 b8d1c9186b479f85b6fffe92da7a4f42 228 Pfam PF13545 Crp-like helix-turn-helix domain 159 227 1.3E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PGJ_RS04015 b8d1c9186b479f85b6fffe92da7a4f42 228 Pfam PF00027 Cyclic nucleotide-binding domain 40 126 5.7E-7 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain PGJ_RS04015 b8d1c9186b479f85b6fffe92da7a4f42 228 PANTHER PTHR24567 35 227 5.2E-38 T 22-04-2016 PGJ_RS04015 b8d1c9186b479f85b6fffe92da7a4f42 228 SMART SM00419 172 220 2.5E-7 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PGJ_RS04015 b8d1c9186b479f85b6fffe92da7a4f42 228 SUPERFAMILY SSF51206 20 149 2.23E-16 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like PGJ_RS04480 03356ea000ebc3023ce1292a3e863995 274 PANTHER PTHR20861:SF2 1 262 1.0E-73 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS04480 03356ea000ebc3023ce1292a3e863995 274 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 269 28.703 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS04480 03356ea000ebc3023ce1292a3e863995 274 Pfam PF08544 GHMP kinases C terminal 206 261 1.3E-9 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain PGJ_RS04480 03356ea000ebc3023ce1292a3e863995 274 Gene3D G3DSA:3.30.70.890 161 262 8.5E-25 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain PGJ_RS04480 03356ea000ebc3023ce1292a3e863995 274 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 6 255 6.1E-46 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS04480 03356ea000ebc3023ce1292a3e863995 274 SUPERFAMILY SSF54211 2 156 1.82E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS04480 03356ea000ebc3023ce1292a3e863995 274 Gene3D G3DSA:3.30.230.10 2 156 3.5E-41 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS04480 03356ea000ebc3023ce1292a3e863995 274 SUPERFAMILY SSF55060 162 262 7.19E-19 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain PGJ_RS04480 03356ea000ebc3023ce1292a3e863995 274 PIRSF PIRSF010376 1 269 1.1E-68 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS04480 03356ea000ebc3023ce1292a3e863995 274 Pfam PF00288 GHMP kinases N terminal domain 85 138 1.4E-5 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 PGJ_RS04480 03356ea000ebc3023ce1292a3e863995 274 PANTHER PTHR20861 1 262 1.0E-73 T 22-04-2016 PGJ_RS00915 90f638bf5d0223be23250e9f73e82b7d 137 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 62 76 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 PGJ_RS00915 90f638bf5d0223be23250e9f73e82b7d 137 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 9 128 14.366 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PGJ_RS00915 90f638bf5d0223be23250e9f73e82b7d 137 Pfam PF00825 Ribonuclease P 9 124 3.9E-16 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PGJ_RS00915 90f638bf5d0223be23250e9f73e82b7d 137 Gene3D G3DSA:3.30.230.10 7 125 9.9E-23 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS00915 90f638bf5d0223be23250e9f73e82b7d 137 SUPERFAMILY SSF54211 14 124 1.37E-14 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS00915 90f638bf5d0223be23250e9f73e82b7d 137 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 88 3.6E-13 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PGJ_RS08245 e7d4ba11893f3efc0324f66e7a271f3b 239 PANTHER PTHR21499 4 237 1.1E-100 T 22-04-2016 PGJ_RS08245 e7d4ba11893f3efc0324f66e7a271f3b 239 PANTHER PTHR21499:SF23 4 237 1.1E-100 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PGJ_RS08245 e7d4ba11893f3efc0324f66e7a271f3b 239 PIRSF PIRSF005650 1 239 3.5E-88 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PGJ_RS08245 e7d4ba11893f3efc0324f66e7a271f3b 239 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 235 42.191 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PGJ_RS08245 e7d4ba11893f3efc0324f66e7a271f3b 239 Gene3D G3DSA:3.40.1160.10 2 235 9.3E-82 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PGJ_RS08245 e7d4ba11893f3efc0324f66e7a271f3b 239 SUPERFAMILY SSF53633 3 235 3.93E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PGJ_RS08245 e7d4ba11893f3efc0324f66e7a271f3b 239 Pfam PF00696 Amino acid kinase family 5 214 6.8E-28 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PGJ_RS08245 e7d4ba11893f3efc0324f66e7a271f3b 239 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 4 234 2.7E-97 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 Gene3D G3DSA:2.40.40.20 430 501 2.6E-37 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 Gene3D G3DSA:2.40.40.20 362 389 2.6E-37 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1406 10.204 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 PANTHER PTHR19376 1 944 0.0 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 PANTHER PTHR19376 972 1147 0.0 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 PANTHER PTHR19376 1333 1393 0.0 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 PANTHER PTHR19376 1168 1251 0.0 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 Pfam PF00623 RNA polymerase Rpb1, domain 2 357 412 1.5E-9 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 Pfam PF00623 RNA polymerase Rpb1, domain 2 417 498 2.5E-26 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 15 1281 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 Pfam PF04998 RNA polymerase Rpb1, domain 5 767 1274 3.2E-69 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 SUPERFAMILY SSF64484 11 945 0.0 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 SUPERFAMILY SSF64484 1123 1282 0.0 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 SUPERFAMILY SSF64484 1324 1409 0.0 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 Pfam PF05000 RNA polymerase Rpb1, domain 4 680 764 4.2E-14 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 Pfam PF04997 RNA polymerase Rpb1, domain 1 11 355 9.5E-83 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 Pfam PF04983 RNA polymerase Rpb1, domain 3 502 650 1.6E-22 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 SMART SM00663 248 527 2.2E-172 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 PANTHER PTHR19376:SF32 1 944 0.0 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 PANTHER PTHR19376:SF32 972 1147 0.0 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 PANTHER PTHR19376:SF32 1333 1393 0.0 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 PANTHER PTHR19376:SF32 1168 1251 0.0 T 22-04-2016 PGJ_RS07015 2a6c5f4c36cf59dc3dacaf99d330552d 1433 Gene3D G3DSA:2.40.50.100 1146 1200 7.4E-12 T 22-04-2016 PGJ_RS04700 3e14b783e20d3da6b584cca69fbc02e9 254 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 8 121 3.4E-10 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PGJ_RS04700 3e14b783e20d3da6b584cca69fbc02e9 254 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 153 244 3.4E-7 T 22-04-2016 IPR010181 CGCAxxGCC motif PGJ_RS04700 3e14b783e20d3da6b584cca69fbc02e9 254 Gene3D G3DSA:3.30.70.560 6 111 3.1E-14 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PGJ_RS04700 3e14b783e20d3da6b584cca69fbc02e9 254 SUPERFAMILY SSF55083 5 125 1.44E-16 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PGJ_RS06145 6f6bc730db7d3be499246a18dfbfda51 379 PANTHER PTHR21015 2 375 3.3E-117 T 22-04-2016 PGJ_RS06145 6f6bc730db7d3be499246a18dfbfda51 379 Gene3D G3DSA:3.40.50.2000 8 212 5.5E-62 T 22-04-2016 PGJ_RS06145 6f6bc730db7d3be499246a18dfbfda51 379 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 12 372 31.793 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS06145 6f6bc730db7d3be499246a18dfbfda51 379 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 200 362 9.7E-32 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS06145 6f6bc730db7d3be499246a18dfbfda51 379 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 12 150 5.9E-32 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS06145 6f6bc730db7d3be499246a18dfbfda51 379 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 9 368 4.1E-86 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS06145 6f6bc730db7d3be499246a18dfbfda51 379 PANTHER PTHR21015:SF22 2 375 3.3E-117 T 22-04-2016 PGJ_RS06145 6f6bc730db7d3be499246a18dfbfda51 379 SUPERFAMILY SSF53756 11 372 7.12E-99 T 22-04-2016 PGJ_RS09205 b77406761a8d0b9a0e691961441f2b1b 262 PANTHER PTHR32552:SF23 14 221 7.1E-40 T 22-04-2016 PGJ_RS09205 b77406761a8d0b9a0e691961441f2b1b 262 SUPERFAMILY SSF53098 57 224 6.7E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS09205 b77406761a8d0b9a0e691961441f2b1b 262 PANTHER PTHR32552 14 221 7.1E-40 T 22-04-2016 PGJ_RS09205 b77406761a8d0b9a0e691961441f2b1b 262 Pfam PF00665 Integrase core domain 62 181 3.3E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS09205 b77406761a8d0b9a0e691961441f2b1b 262 Gene3D G3DSA:3.30.420.10 57 219 2.1E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 225 8.8E-93 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 Pfam PF00318 Ribosomal protein S2 9 224 2.5E-92 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 Gene3D G3DSA:1.10.287.610 100 151 6.9E-23 T 22-04-2016 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 PANTHER PTHR12534 1 270 2.3E-108 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 Gene3D G3DSA:3.40.50.10490 158 247 2.4E-64 T 22-04-2016 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 Gene3D G3DSA:3.40.50.10490 23 99 2.4E-64 T 22-04-2016 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 38.824 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 SUPERFAMILY SSF52313 7 237 4.05E-88 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.0E-33 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.0E-33 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.0E-33 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.0E-33 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.0E-33 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.0E-33 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07110 7e2a2131d93ee46ddc810e56532c68b1 281 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 PGJ_RS06565 8c793a86f6bbfe61f5cdd664680f8993 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 48 66 4.0E-14 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PGJ_RS06565 8c793a86f6bbfe61f5cdd664680f8993 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 75 93 4.0E-14 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PGJ_RS06565 8c793a86f6bbfe61f5cdd664680f8993 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 117 136 4.0E-14 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PGJ_RS06565 8c793a86f6bbfe61f5cdd664680f8993 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 4.0E-14 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PGJ_RS06565 8c793a86f6bbfe61f5cdd664680f8993 159 Gene3D G3DSA:3.30.1360.80 1 158 5.6E-54 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PGJ_RS06565 8c793a86f6bbfe61f5cdd664680f8993 159 PANTHER PTHR35799 3 159 1.3E-19 T 22-04-2016 PGJ_RS06565 8c793a86f6bbfe61f5cdd664680f8993 159 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 155 32.119 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PGJ_RS06565 8c793a86f6bbfe61f5cdd664680f8993 159 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 149 1.0E-79 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PGJ_RS06565 8c793a86f6bbfe61f5cdd664680f8993 159 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 3 150 2.0E-55 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PGJ_RS06565 8c793a86f6bbfe61f5cdd664680f8993 159 SUPERFAMILY SSF63411 3 159 4.3E-49 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PGJ_RS06565 8c793a86f6bbfe61f5cdd664680f8993 159 PIRSF PIRSF006160 1 158 9.2E-53 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 Pfam PF13180 PDZ domain 97 172 3.6E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 51 349 1.1E-72 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 PANTHER PTHR32060:SF9 40 430 3.2E-101 T 22-04-2016 PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 SMART SM00228 96 169 6.4E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 Gene3D G3DSA:3.90.226.10 397 409 1.8E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 Gene3D G3DSA:3.90.226.10 504 524 1.8E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 Gene3D G3DSA:3.90.226.10 178 348 1.8E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 SMART SM00245 169 360 1.6E-40 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 Pfam PF03572 Peptidase family S41 196 356 1.2E-48 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 Gene3D G3DSA:2.30.42.10 91 177 3.7E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 SUPERFAMILY SSF50156 68 186 2.37E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 SUPERFAMILY SSF52096 25 114 1.11E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 SUPERFAMILY SSF52096 189 349 1.11E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS08045 05e3512325edd83ef607016bb6a30c7e 544 PANTHER PTHR32060 40 430 3.2E-101 T 22-04-2016 PGJ_RS07580 1e8fdb01252281fd58fc4e40a0a3ff70 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07580 1e8fdb01252281fd58fc4e40a0a3ff70 89 Gene3D G3DSA:1.10.287.10 3 89 2.8E-36 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 PGJ_RS07580 1e8fdb01252281fd58fc4e40a0a3ff70 89 SMART SM01387 8 88 2.8E-45 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07580 1e8fdb01252281fd58fc4e40a0a3ff70 89 SUPERFAMILY SSF47060 3 89 3.24E-32 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 PGJ_RS07580 1e8fdb01252281fd58fc4e40a0a3ff70 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 1.6E-30 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 PGJ_RS07580 1e8fdb01252281fd58fc4e40a0a3ff70 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.592 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 PGJ_RS07580 1e8fdb01252281fd58fc4e40a0a3ff70 89 PANTHER PTHR23321 1 89 6.0E-35 T 22-04-2016 PGJ_RS07580 1e8fdb01252281fd58fc4e40a0a3ff70 89 Pfam PF00312 Ribosomal protein S15 8 88 1.4E-32 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07580 1e8fdb01252281fd58fc4e40a0a3ff70 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 7.0E-40 T 22-04-2016 PGJ_RS05745 65f4b81ed07207a19bb617d6e1d276af 424 Pfam PF14284 PcfJ-like protein 254 406 6.6E-44 T 22-04-2016 IPR025586 PcfJ-like protein PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 Pfam PF02767 DNA polymerase III beta subunit, central domain 133 246 6.3E-17 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 SUPERFAMILY SSF55979 132 247 1.44E-18 T 22-04-2016 PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 SMART SM00480 17 368 3.6E-31 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 1.5E-17 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 Gene3D G3DSA:3.10.150.10 1 119 2.8E-22 T 22-04-2016 PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 Gene3D G3DSA:3.10.150.10 252 374 1.6E-16 T 22-04-2016 PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 SUPERFAMILY SSF55979 249 374 2.7E-18 T 22-04-2016 PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 249 360 6.7E-9 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 Gene3D G3DSA:3.10.150.10 133 251 5.8E-26 T 22-04-2016 PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 PIRSF PIRSF000804 1 375 3.3E-104 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 374 1.4E-50 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 SUPERFAMILY SSF55979 1 119 5.65E-20 T 22-04-2016 PGJ_RS08035 ef59fbf4b93bb0fafbd7a71cbdc3a74a 377 PANTHER PTHR30478 2 376 5.5E-75 T 22-04-2016 PGJ_RS04930 acbcc537202097f0f4a2c86ddf7a12a2 402 PANTHER PTHR32145:SF2 2 402 4.4E-140 T 22-04-2016 PGJ_RS04930 acbcc537202097f0f4a2c86ddf7a12a2 402 ProSitePatterns PS00201 Flavodoxin signature. 257 273 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 PGJ_RS04930 acbcc537202097f0f4a2c86ddf7a12a2 402 SMART SM00849 35 227 7.7E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS04930 acbcc537202097f0f4a2c86ddf7a12a2 402 PANTHER PTHR32145 2 402 4.4E-140 T 22-04-2016 PGJ_RS04930 acbcc537202097f0f4a2c86ddf7a12a2 402 Gene3D G3DSA:3.60.15.10 1 247 6.2E-78 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS04930 acbcc537202097f0f4a2c86ddf7a12a2 402 SUPERFAMILY SSF52218 255 400 4.19E-34 T 22-04-2016 IPR029039 Flavoprotein-like domain PGJ_RS04930 acbcc537202097f0f4a2c86ddf7a12a2 402 SUPERFAMILY SSF56281 4 300 1.36E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS04930 acbcc537202097f0f4a2c86ddf7a12a2 402 PIRSF PIRSF005243 1 402 2.4E-134 T 22-04-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 PGJ_RS04930 acbcc537202097f0f4a2c86ddf7a12a2 402 Gene3D G3DSA:3.40.50.360 251 395 2.3E-40 T 22-04-2016 IPR029039 Flavoprotein-like domain PGJ_RS04930 acbcc537202097f0f4a2c86ddf7a12a2 402 Pfam PF00258 Flavodoxin 257 384 1.0E-8 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PGJ_RS04930 acbcc537202097f0f4a2c86ddf7a12a2 402 Pfam PF00753 Metallo-beta-lactamase superfamily 35 177 1.3E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 SMART SM00316 44 109 1.9E-13 T 22-04-2016 IPR022967 RNA-binding domain, S1 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 SMART SM00316 297 369 2.4E-23 T 22-04-2016 IPR022967 RNA-binding domain, S1 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 SMART SM00316 212 282 1.4E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 SMART SM00316 471 538 5.3E-11 T 22-04-2016 IPR022967 RNA-binding domain, S1 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 SMART SM00316 384 456 3.9E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 SMART SM00316 125 193 3.8E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 PANTHER PTHR10724 40 532 3.1E-213 T 22-04-2016 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 Pfam PF00575 S1 RNA binding domain 210 282 2.1E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 Pfam PF00575 S1 RNA binding domain 44 109 1.5E-8 T 22-04-2016 IPR003029 S1 domain GO:0003676 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 Pfam PF00575 S1 RNA binding domain 125 193 1.3E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 Pfam PF00575 S1 RNA binding domain 471 537 1.3E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 Pfam PF00575 S1 RNA binding domain 384 456 3.2E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 Pfam PF00575 S1 RNA binding domain 296 369 1.1E-17 T 22-04-2016 IPR003029 S1 domain GO:0003676 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 PRINTS PR00681 Ribosomal protein S1 signature 234 255 1.2E-65 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 PRINTS PR00681 Ribosomal protein S1 signature 64 78 1.2E-65 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 PRINTS PR00681 Ribosomal protein S1 signature 130 146 1.2E-65 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 PRINTS PR00681 Ribosomal protein S1 signature 177 197 1.2E-65 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 PRINTS PR00681 Ribosomal protein S1 signature 106 125 1.2E-65 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 PRINTS PR00681 Ribosomal protein S1 signature 46 64 1.2E-65 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 PRINTS PR00681 Ribosomal protein S1 signature 148 165 1.2E-65 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 PRINTS PR00681 Ribosomal protein S1 signature 352 370 1.2E-65 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 PRINTS PR00681 Ribosomal protein S1 signature 312 331 1.2E-65 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 SUPERFAMILY SSF50249 277 381 8.21E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 Gene3D G3DSA:2.40.50.140 463 540 1.0E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 PANTHER PTHR10724:SF6 40 532 3.1E-213 T 22-04-2016 PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 Gene3D G3DSA:2.40.50.140 214 297 3.8E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 SUPERFAMILY SSF50249 31 134 8.9E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 SUPERFAMILY SSF50249 110 195 1.25E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 SUPERFAMILY SSF50249 211 293 1.04E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 Gene3D G3DSA:2.40.50.140 381 462 2.4E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 Gene3D G3DSA:2.40.50.140 298 379 2.9E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 SUPERFAMILY SSF50249 364 472 2.09E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 Gene3D G3DSA:2.40.50.140 37 110 1.5E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 Gene3D G3DSA:2.40.50.140 117 193 3.1E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02775 f2eb2148d94146ff34504db9131a25bb 599 SUPERFAMILY SSF50249 457 542 5.07E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS07690 3f6dda3146cd0cb67fc404548f691992 164 Pfam PF01661 Macro domain 20 132 1.5E-46 T 22-04-2016 IPR002589 Macro domain PGJ_RS07690 3f6dda3146cd0cb67fc404548f691992 164 PANTHER PTHR11106 3 160 1.2E-76 T 22-04-2016 PGJ_RS07690 3f6dda3146cd0cb67fc404548f691992 164 SUPERFAMILY SSF52949 3 161 2.52E-62 T 22-04-2016 PGJ_RS07690 3f6dda3146cd0cb67fc404548f691992 164 Gene3D G3DSA:3.40.220.10 3 160 1.7E-66 T 22-04-2016 PGJ_RS07690 3f6dda3146cd0cb67fc404548f691992 164 SMART SM00506 3 132 1.4E-49 T 22-04-2016 IPR002589 Macro domain PGJ_RS05305 e160e6a2977a1aae66af349c8c2a8479 248 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 246 40.764 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 PGJ_RS05305 e160e6a2977a1aae66af349c8c2a8479 248 Gene3D G3DSA:3.20.20.380 3 246 9.1E-91 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 PGJ_RS05305 e160e6a2977a1aae66af349c8c2a8479 248 PANTHER PTHR12598:SF0 1 248 6.8E-102 T 22-04-2016 PGJ_RS05305 e160e6a2977a1aae66af349c8c2a8479 248 PANTHER PTHR12598 1 248 6.8E-102 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 PGJ_RS05305 e160e6a2977a1aae66af349c8c2a8479 248 SUPERFAMILY SSF110395 3 246 5.1E-69 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 PGJ_RS05305 e160e6a2977a1aae66af349c8c2a8479 248 Pfam PF03932 CutC family 3 202 1.7E-71 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 Gene3D G3DSA:3.40.50.920 261 411 1.2E-63 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 Pfam PF13484 4Fe-4S double cluster binding domain 690 758 1.9E-9 T 22-04-2016 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 Gene3D G3DSA:4.10.780.10 632 670 3.6E-16 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 SUPERFAMILY SSF54862 675 768 2.93E-16 T 22-04-2016 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 PANTHER PTHR32154 5 1181 0.0 T 22-04-2016 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 7 1172 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 961 1070 1.4E-10 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 SUPERFAMILY SSF52922 261 414 1.71E-49 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 Gene3D G3DSA:3.40.50.970 797 1172 5.1E-145 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 427 609 3.2E-29 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 21 249 2.8E-81 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 Pfam PF10371 Domain of unknown function 630 680 5.8E-21 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 691 702 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 Gene3D G3DSA:3.40.50.970 6 260 1.1E-113 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 271 373 1.9E-16 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 SUPERFAMILY SSF52518 797 1175 3.47E-131 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 Gene3D G3DSA:3.40.920.10 419 625 5.2E-85 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 SUPERFAMILY SSF52518 6 260 1.59E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 SUPERFAMILY SSF53323 419 667 9.02E-80 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 PANTHER PTHR32154:SF0 5 1181 0.0 T 22-04-2016 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 SMART SM00890 622 681 1.2E-27 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 PIRSF PIRSF000159 2 1179 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 PGJ_RS06255 312e9cdcc3fe1306f3762d760b421e55 1193 Gene3D G3DSA:3.30.70.20 675 777 6.5E-18 T 22-04-2016 PGJ_RS05485 03eac6b13f35eebb39db321b2b8b5daf 170 Gene3D G3DSA:3.40.50.850 2 167 6.6E-34 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PGJ_RS05485 03eac6b13f35eebb39db321b2b8b5daf 170 Pfam PF00857 Isochorismatase family 2 149 6.7E-17 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PGJ_RS05485 03eac6b13f35eebb39db321b2b8b5daf 170 PANTHER PTHR11080 3 167 2.1E-24 T 22-04-2016 PGJ_RS05485 03eac6b13f35eebb39db321b2b8b5daf 170 SUPERFAMILY SSF52499 2 165 3.79E-25 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PGJ_RS05485 03eac6b13f35eebb39db321b2b8b5daf 170 PANTHER PTHR11080:SF2 3 167 2.1E-24 T 22-04-2016 PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 SUPERFAMILY SSF160443 765 838 3.4E-9 T 22-04-2016 IPR002625 Smr domain PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 PANTHER PTHR11361 43 619 1.0E-195 T 22-04-2016 PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 SMART SM00463 762 840 3.1E-9 T 22-04-2016 IPR002625 Smr domain PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 SUPERFAMILY SSF52540 303 530 1.28E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 SUPERFAMILY SSF48334 24 300 1.22E-22 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 8 839 17.611 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 Gene3D G3DSA:3.40.50.300 303 530 6.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 Pfam PF01713 Smr domain 766 839 3.0E-17 T 22-04-2016 IPR002625 Smr domain PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 SMART SM00533 15 326 9.2E-9 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 PANTHER PTHR11361:SF14 43 619 1.0E-195 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 SMART SM00534 346 531 5.4E-49 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 PIRSF PIRSF005814 9 840 3.5E-195 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 PGJ_RS07085 8e74f8e385f58ba3c6eb9319c96806ec 840 Pfam PF00488 MutS domain V 349 529 9.6E-27 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PGJ_RS05300 73f74590c8b360fba74f0cc75d19120c 306 SUPERFAMILY SSF144083 242 303 1.83E-14 T 22-04-2016 PGJ_RS05300 73f74590c8b360fba74f0cc75d19120c 306 Gene3D G3DSA:1.20.58.340 233 306 1.9E-19 T 22-04-2016 PGJ_RS05300 73f74590c8b360fba74f0cc75d19120c 306 SUPERFAMILY SSF143865 17 241 3.79E-39 T 22-04-2016 PGJ_RS05300 73f74590c8b360fba74f0cc75d19120c 306 Gene3D G3DSA:3.30.460.20 19 103 7.5E-5 T 22-04-2016 PGJ_RS05300 73f74590c8b360fba74f0cc75d19120c 306 Pfam PF01544 CorA-like Mg2+ transporter protein 21 302 2.1E-56 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PGJ_RS05300 73f74590c8b360fba74f0cc75d19120c 306 PANTHER PTHR21535 21 306 1.0E-72 T 22-04-2016 PGJ_RS05300 73f74590c8b360fba74f0cc75d19120c 306 PANTHER PTHR21535:SF40 21 306 1.0E-72 T 22-04-2016 PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 Gene3D G3DSA:3.40.50.150 204 437 7.8E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 Pfam PF12161 HsdM N-terminal domain 9 162 1.7E-16 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 495 6.7E-139 T 22-04-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 299 305 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 PANTHER PTHR30408 179 501 9.6E-157 T 22-04-2016 PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 PANTHER PTHR30408:SF4 179 501 9.6E-157 T 22-04-2016 PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 Pfam PF02384 N-6 DNA Methylase 178 481 1.2E-112 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 218 2.8E-23 T 22-04-2016 PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 296 308 2.8E-23 T 22-04-2016 PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 332 356 2.8E-23 T 22-04-2016 PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 228 242 2.8E-23 T 22-04-2016 PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 SUPERFAMILY SSF53335 86 514 1.94E-130 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS04815 37226c4add5d97ce8ce995064356d55c 517 SUPERFAMILY SSF53335 7 46 1.94E-130 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 37 47 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 SUPERFAMILY SSF52374 1 325 6.65E-99 T 22-04-2016 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 PANTHER PTHR11766:SF0 1 429 2.7E-198 T 22-04-2016 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 429 43.98 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 Pfam PF00579 tRNA synthetases class I (W and Y) 28 325 9.6E-83 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 SUPERFAMILY SSF55174 333 429 1.06E-14 T 22-04-2016 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 Gene3D G3DSA:3.10.290.10 319 429 1.9E-27 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 Gene3D G3DSA:1.10.240.10 235 318 7.3E-39 T 22-04-2016 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 Gene3D G3DSA:3.40.50.620 2 234 1.5E-99 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 428 7.2E-122 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 PANTHER PTHR11766 1 429 2.7E-198 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 218 230 2.0E-30 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 185 207 2.0E-30 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 2.0E-30 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PGJ_RS01180 917ad1f264d00b62fcb81cb20e1f3e0b 430 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 41 63 2.0E-30 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PGJ_RS08800 127c54455ce8bae772bed5752ef56bf0 327 SUPERFAMILY SSF52058 65 279 2.72E-14 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PGJ_RS08800 127c54455ce8bae772bed5752ef56bf0 327 Gene3D G3DSA:3.80.10.10 74 120 2.4E-5 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PGJ_RS08800 127c54455ce8bae772bed5752ef56bf0 327 Gene3D G3DSA:3.80.10.10 165 254 2.4E-5 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PGJ_RS08800 127c54455ce8bae772bed5752ef56bf0 327 PANTHER PTHR11017 71 278 1.3E-41 T 22-04-2016 PGJ_RS08800 127c54455ce8bae772bed5752ef56bf0 327 Pfam PF13306 Leucine rich repeats (6 copies) 65 156 2.1E-19 T 22-04-2016 IPR026906 Leucine rich repeat 5 PGJ_RS08800 127c54455ce8bae772bed5752ef56bf0 327 Pfam PF13306 Leucine rich repeats (6 copies) 168 279 4.5E-24 T 22-04-2016 IPR026906 Leucine rich repeat 5 PGJ_RS07315 25e259a8a10a0e9a46dd2ada8c6c98e4 209 Pfam PF04961 Formiminotransferase-cyclodeaminase 7 187 4.2E-66 T 22-04-2016 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00379 PGJ_RS07315 25e259a8a10a0e9a46dd2ada8c6c98e4 209 SUPERFAMILY SSF101262 3 206 2.62E-62 T 22-04-2016 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00379 PGJ_RS07315 25e259a8a10a0e9a46dd2ada8c6c98e4 209 PANTHER PTHR12234 1 167 9.4E-69 T 22-04-2016 PGJ_RS01925 5c40c3aa9615b0992b217027bec27f98 247 PANTHER PTHR23083 25 151 6.5E-15 T 22-04-2016 PGJ_RS01925 5c40c3aa9615b0992b217027bec27f98 247 SUPERFAMILY SSF48452 31 148 2.13E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01925 5c40c3aa9615b0992b217027bec27f98 247 SMART SM00028 99 132 1.4E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01925 5c40c3aa9615b0992b217027bec27f98 247 SMART SM00028 61 93 78.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01925 5c40c3aa9615b0992b217027bec27f98 247 SMART SM00028 27 60 36.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01925 5c40c3aa9615b0992b217027bec27f98 247 Gene3D G3DSA:1.25.40.10 26 149 7.1E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01925 5c40c3aa9615b0992b217027bec27f98 247 Pfam PF13414 TPR repeat 106 144 5.3E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01925 5c40c3aa9615b0992b217027bec27f98 247 Pfam PF14559 Tetratricopeptide repeat 40 88 1.0E-6 T 22-04-2016 PGJ_RS09465 6c82641f6f443f290b5c788c63cf5aa0 66 Gene3D G3DSA:3.10.20.30 1 66 9.2E-22 T 22-04-2016 IPR012675 Beta-grasp domain PGJ_RS09465 6c82641f6f443f290b5c788c63cf5aa0 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 3.8E-21 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis PGJ_RS09465 6c82641f6f443f290b5c788c63cf5aa0 66 PANTHER PTHR34472:SF1 1 66 9.9E-20 T 22-04-2016 PGJ_RS09465 6c82641f6f443f290b5c788c63cf5aa0 66 SUPERFAMILY SSF54285 1 66 2.47E-16 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PGJ_RS09465 6c82641f6f443f290b5c788c63cf5aa0 66 PANTHER PTHR34472 1 66 9.9E-20 T 22-04-2016 PGJ_RS09465 6c82641f6f443f290b5c788c63cf5aa0 66 Pfam PF02597 ThiS family 3 66 2.1E-12 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 PGJ_RS00300 18955cade255f0ec7d443e024dc0e8a5 462 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 319 456 6.9E-49 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PGJ_RS00300 18955cade255f0ec7d443e024dc0e8a5 462 SUPERFAMILY SSF54211 138 299 2.43E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS00300 18955cade255f0ec7d443e024dc0e8a5 462 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 319 459 31.138 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PGJ_RS00300 18955cade255f0ec7d443e024dc0e8a5 462 Pfam PF07977 FabA-like domain 328 451 4.8E-29 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PGJ_RS00300 18955cade255f0ec7d443e024dc0e8a5 462 Gene3D G3DSA:3.30.230.20 3 125 5.9E-42 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PGJ_RS00300 18955cade255f0ec7d443e024dc0e8a5 462 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 297 3.5E-91 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PGJ_RS00300 18955cade255f0ec7d443e024dc0e8a5 462 SUPERFAMILY SSF54637 321 460 5.81E-42 T 22-04-2016 IPR029069 HotDog domain PGJ_RS00300 18955cade255f0ec7d443e024dc0e8a5 462 Gene3D G3DSA:3.10.129.10 314 459 2.6E-54 T 22-04-2016 IPR029069 HotDog domain PGJ_RS00300 18955cade255f0ec7d443e024dc0e8a5 462 PANTHER PTHR30272 224 461 2.3E-123 T 22-04-2016 PGJ_RS00300 18955cade255f0ec7d443e024dc0e8a5 462 SUPERFAMILY SSF54211 3 125 4.48E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS00300 18955cade255f0ec7d443e024dc0e8a5 462 PANTHER PTHR30272:SF1 224 461 2.3E-123 T 22-04-2016 PGJ_RS00300 18955cade255f0ec7d443e024dc0e8a5 462 Gene3D G3DSA:3.30.1700.10 128 303 1.7E-46 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 Gene3D G3DSA:2.70.98.10 41 311 2.1E-42 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 9 750 0.0 T 22-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 Gene3D G3DSA:1.20.1610.10 443 608 2.6E-44 T 22-04-2016 PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 SUPERFAMILY SSF48208 253 743 6.8E-23 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 PANTHER PTHR12143:SF22 379 428 3.3E-121 T 22-04-2016 PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 PANTHER PTHR12143:SF22 454 750 3.3E-121 T 22-04-2016 PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 PANTHER PTHR12143:SF22 20 361 3.3E-121 T 22-04-2016 PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 Gene3D G3DSA:1.20.1050.60 339 427 8.8E-25 T 22-04-2016 PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 PANTHER PTHR12143 379 428 3.3E-121 T 22-04-2016 PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 PANTHER PTHR12143 454 750 3.3E-121 T 22-04-2016 PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 PANTHER PTHR12143 20 361 3.3E-121 T 22-04-2016 PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 Gene3D G3DSA:3.30.2080.10 609 757 5.1E-62 T 22-04-2016 PGJ_RS01375 6155f84d335c0660a885efdcd4f75e7a 767 Pfam PF07971 Glycosyl hydrolase family 92 232 746 3.8E-138 T 22-04-2016 IPR012939 Glycosyl hydrolase family 92 PGJ_RS03875 361c0b0f5c79ebfd943d12dc0293bef9 375 Pfam PF00534 Glycosyl transferases group 1 194 349 1.5E-35 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 PGJ_RS03875 361c0b0f5c79ebfd943d12dc0293bef9 375 PANTHER PTHR12526 27 371 5.2E-47 T 22-04-2016 PGJ_RS03875 361c0b0f5c79ebfd943d12dc0293bef9 375 Gene3D G3DSA:3.40.50.2000 197 347 9.3E-26 T 22-04-2016 PGJ_RS03875 361c0b0f5c79ebfd943d12dc0293bef9 375 Pfam PF13439 Glycosyltransferase Family 4 27 184 4.7E-11 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PGJ_RS03875 361c0b0f5c79ebfd943d12dc0293bef9 375 SUPERFAMILY SSF53756 15 368 5.89E-64 T 22-04-2016 PGJ_RS09190 d3d21e13f94b7ac387367f10c3201b8a 101 Pfam PF01609 Transposase DDE domain 15 69 1.3E-5 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS07700 c6e0a6034027f939df7317682d8eda8e 207 PANTHER PTHR10285 5 203 1.4E-82 T 22-04-2016 PGJ_RS07700 c6e0a6034027f939df7317682d8eda8e 207 Gene3D G3DSA:3.40.50.300 4 202 5.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07700 c6e0a6034027f939df7317682d8eda8e 207 PRINTS PR00988 Uridine kinase signature 3 20 1.7E-34 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 PGJ_RS07700 c6e0a6034027f939df7317682d8eda8e 207 PRINTS PR00988 Uridine kinase signature 170 183 1.7E-34 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 PGJ_RS07700 c6e0a6034027f939df7317682d8eda8e 207 PRINTS PR00988 Uridine kinase signature 148 159 1.7E-34 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 PGJ_RS07700 c6e0a6034027f939df7317682d8eda8e 207 PRINTS PR00988 Uridine kinase signature 134 144 1.7E-34 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 PGJ_RS07700 c6e0a6034027f939df7317682d8eda8e 207 PRINTS PR00988 Uridine kinase signature 33 44 1.7E-34 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 PGJ_RS07700 c6e0a6034027f939df7317682d8eda8e 207 PRINTS PR00988 Uridine kinase signature 78 93 1.7E-34 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 PGJ_RS07700 c6e0a6034027f939df7317682d8eda8e 207 TIGRFAM TIGR00235 udk: uridine kinase 3 203 6.9E-82 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 PGJ_RS07700 c6e0a6034027f939df7317682d8eda8e 207 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 5 190 1.7E-43 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 PGJ_RS07700 c6e0a6034027f939df7317682d8eda8e 207 SUPERFAMILY SSF52540 4 195 2.36E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07700 c6e0a6034027f939df7317682d8eda8e 207 Hamap MF_00551 Uridine kinase [udk]. 1 204 37.317 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 PANTHER PTHR32282 4 364 1.6E-203 T 22-04-2016 PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 PANTHER PTHR32282 449 738 1.6E-203 T 22-04-2016 PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 Gene3D G3DSA:1.10.3810.10 69 245 3.1E-57 T 22-04-2016 PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 SUPERFAMILY SSF53955 50 271 1.38E-60 T 22-04-2016 IPR023346 Lysozyme-like domain PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 Pfam PF00905 Penicillin binding protein transpeptidase domain 457 696 9.3E-22 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 Pfam PF00912 Transglycosylase 61 243 1.4E-51 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 PANTHER PTHR32282:SF11 449 738 1.6E-203 T 22-04-2016 PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 PANTHER PTHR32282:SF11 4 364 1.6E-203 T 22-04-2016 PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 Gene3D G3DSA:3.40.710.10 333 367 3.6E-106 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 Gene3D G3DSA:3.40.710.10 246 294 3.6E-106 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 Gene3D G3DSA:3.40.710.10 448 761 3.6E-106 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 SUPERFAMILY SSF56601 311 363 2.92E-98 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 SUPERFAMILY SSF56601 450 758 2.92E-98 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS04970 3307bd8f411628bc7dc15884ff78d312 784 SUPERFAMILY SSF56601 229 247 2.92E-98 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 SUPERFAMILY SSF56553 51 175 1.23E-35 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 58 156 9.8E-18 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 312 4.8E-22 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 22 321 5.8E-118 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 Gene3D G3DSA:1.10.150.20 250 328 4.2E-28 T 22-04-2016 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 SMART SM00662 21 231 9.7E-72 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 Gene3D G3DSA:2.170.120.12 51 174 9.8E-39 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 27 225 1.8E-23 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 SUPERFAMILY SSF55257 7 51 2.88E-29 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 SUPERFAMILY SSF55257 176 230 2.88E-29 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 268 322 7.0E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 321 33.985 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 PANTHER PTHR32108 3 325 1.8E-104 T 22-04-2016 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 SUPERFAMILY SSF47789 255 327 1.31E-21 T 22-04-2016 PGJ_RS08260 5835dc6e61e16b512d7c4f84249f0246 330 PANTHER PTHR32108:SF0 3 325 1.8E-104 T 22-04-2016 PGJ_RS00390 f36b483008e24bb9f29a12b98d965586 159 PANTHER PTHR30295 1 156 3.4E-54 T 22-04-2016 PGJ_RS00390 f36b483008e24bb9f29a12b98d965586 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 4.8E-15 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 PGJ_RS00390 f36b483008e24bb9f29a12b98d965586 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 4.8E-15 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 PGJ_RS00390 f36b483008e24bb9f29a12b98d965586 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 4.8E-15 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 PGJ_RS00390 f36b483008e24bb9f29a12b98d965586 159 SUPERFAMILY SSF47240 5 157 6.4E-39 T 22-04-2016 IPR009078 Ferritin-like superfamily PGJ_RS00390 f36b483008e24bb9f29a12b98d965586 159 PANTHER PTHR30295:SF6 1 156 3.4E-54 T 22-04-2016 PGJ_RS00390 f36b483008e24bb9f29a12b98d965586 159 Gene3D G3DSA:1.20.1260.10 8 157 1.6E-51 T 22-04-2016 IPR012347 Ferritin-related PGJ_RS00390 f36b483008e24bb9f29a12b98d965586 159 Pfam PF00210 Ferritin-like domain 21 158 1.9E-23 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PGJ_RS00390 f36b483008e24bb9f29a12b98d965586 159 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 PGJ_RS00390 f36b483008e24bb9f29a12b98d965586 159 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 PGJ_RS00390 f36b483008e24bb9f29a12b98d965586 159 PIRSF PIRSF005900 1 159 1.7E-43 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 PGJ_RS06375 5218efc58735837c705d86b7c61995f3 627 Gene3D G3DSA:3.40.50.2020 332 395 1.5E-20 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS06375 5218efc58735837c705d86b7c61995f3 627 Gene3D G3DSA:3.40.50.2020 447 517 1.5E-20 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS06375 5218efc58735837c705d86b7c61995f3 627 SUPERFAMILY SSF56235 8 331 5.49E-43 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PGJ_RS06375 5218efc58735837c705d86b7c61995f3 627 PANTHER PTHR11907:SF0 45 379 7.2E-85 T 22-04-2016 PGJ_RS06375 5218efc58735837c705d86b7c61995f3 627 PANTHER PTHR11907:SF0 396 518 7.2E-85 T 22-04-2016 PGJ_RS06375 5218efc58735837c705d86b7c61995f3 627 Gene3D G3DSA:3.60.20.10 7 301 2.8E-44 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PGJ_RS06375 5218efc58735837c705d86b7c61995f3 627 SUPERFAMILY SSF53271 316 392 2.44E-16 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS06375 5218efc58735837c705d86b7c61995f3 627 SUPERFAMILY SSF53271 421 517 2.44E-16 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS06375 5218efc58735837c705d86b7c61995f3 627 PANTHER PTHR11907 45 379 7.2E-85 T 22-04-2016 PGJ_RS06375 5218efc58735837c705d86b7c61995f3 627 PANTHER PTHR11907 396 518 7.2E-85 T 22-04-2016 PGJ_RS07010 054bb8b7f309179579cbc68b8f9daf1b 232 Gene3D G3DSA:2.60.120.10 17 147 9.1E-30 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PGJ_RS07010 054bb8b7f309179579cbc68b8f9daf1b 232 Pfam PF00027 Cyclic nucleotide-binding domain 38 121 2.2E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain PGJ_RS07010 054bb8b7f309179579cbc68b8f9daf1b 232 SMART SM00419 173 221 0.0017 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PGJ_RS07010 054bb8b7f309179579cbc68b8f9daf1b 232 Pfam PF13545 Crp-like helix-turn-helix domain 155 227 2.7E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PGJ_RS07010 054bb8b7f309179579cbc68b8f9daf1b 232 SMART SM00100 17 138 1.4E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain PGJ_RS07010 054bb8b7f309179579cbc68b8f9daf1b 232 SUPERFAMILY SSF46785 153 229 1.2E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS07010 054bb8b7f309179579cbc68b8f9daf1b 232 PANTHER PTHR24567 17 229 2.4E-39 T 22-04-2016 PGJ_RS07010 054bb8b7f309179579cbc68b8f9daf1b 232 SUPERFAMILY SSF51206 18 150 9.17E-32 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like PGJ_RS07010 054bb8b7f309179579cbc68b8f9daf1b 232 Gene3D G3DSA:1.10.10.10 152 229 2.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS02560 6b391776bbc6c4b491462765c0b03e1d 423 SUPERFAMILY SSF53756 3 423 3.18E-62 T 22-04-2016 PGJ_RS02560 6b391776bbc6c4b491462765c0b03e1d 423 Pfam PF00534 Glycosyl transferases group 1 249 389 3.5E-25 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 PGJ_RS02560 6b391776bbc6c4b491462765c0b03e1d 423 Pfam PF13439 Glycosyltransferase Family 4 13 223 1.3E-11 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PGJ_RS02560 6b391776bbc6c4b491462765c0b03e1d 423 PANTHER PTHR12526 176 423 5.5E-48 T 22-04-2016 PGJ_RS02560 6b391776bbc6c4b491462765c0b03e1d 423 PANTHER PTHR12526 60 149 5.5E-48 T 22-04-2016 PGJ_RS02560 6b391776bbc6c4b491462765c0b03e1d 423 PANTHER PTHR12526 1 40 5.5E-48 T 22-04-2016 PGJ_RS02560 6b391776bbc6c4b491462765c0b03e1d 423 Gene3D G3DSA:3.40.50.2000 212 393 2.5E-23 T 22-04-2016 PGJ_RS08675 bf73b076dbe26bfb79946a8e4ca167c7 238 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 103 2.7E-16 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS08675 bf73b076dbe26bfb79946a8e4ca167c7 238 Gene3D G3DSA:3.30.360.10 114 207 2.2E-24 T 22-04-2016 PGJ_RS08675 bf73b076dbe26bfb79946a8e4ca167c7 238 Gene3D G3DSA:3.40.50.720 1 113 2.0E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS08675 bf73b076dbe26bfb79946a8e4ca167c7 238 SUPERFAMILY SSF55347 105 209 4.8E-22 T 22-04-2016 PGJ_RS08675 bf73b076dbe26bfb79946a8e4ca167c7 238 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 40 236 6.0E-37 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS08675 bf73b076dbe26bfb79946a8e4ca167c7 238 PIRSF PIRSF000161 1 238 7.4E-57 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS08675 bf73b076dbe26bfb79946a8e4ca167c7 238 PANTHER PTHR20836 1 238 7.8E-48 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS08675 bf73b076dbe26bfb79946a8e4ca167c7 238 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 106 235 2.4E-32 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS08675 bf73b076dbe26bfb79946a8e4ca167c7 238 SUPERFAMILY SSF51735 1 102 1.63E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS08675 bf73b076dbe26bfb79946a8e4ca167c7 238 SUPERFAMILY SSF51735 208 236 1.63E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09570 f882e555df6f57b7d6d8be5f62df5643 387 ProDom PD008717 FIMBRILLIN MAJOR FIMBRIAL FIMBRILIN PRECURSOR VIRULENCE SUBUNIT FIMBRIA TYPE CELL 37 387 0.0 T 22-04-2016 PGJ_RS09570 f882e555df6f57b7d6d8be5f62df5643 387 PRINTS PR01737 Porphyromonas gingivalis fimbrillin protein signature 115 131 1.9E-55 T 22-04-2016 IPR008110 Porphyromonas gingivalis fimbrillin protein GO:0005198|GO:0007155|GO:0009289|GO:0009405 PGJ_RS09570 f882e555df6f57b7d6d8be5f62df5643 387 PRINTS PR01737 Porphyromonas gingivalis fimbrillin protein signature 364 378 1.9E-55 T 22-04-2016 IPR008110 Porphyromonas gingivalis fimbrillin protein GO:0005198|GO:0007155|GO:0009289|GO:0009405 PGJ_RS09570 f882e555df6f57b7d6d8be5f62df5643 387 PRINTS PR01737 Porphyromonas gingivalis fimbrillin protein signature 314 330 1.9E-55 T 22-04-2016 IPR008110 Porphyromonas gingivalis fimbrillin protein GO:0005198|GO:0007155|GO:0009289|GO:0009405 PGJ_RS09570 f882e555df6f57b7d6d8be5f62df5643 387 PRINTS PR01737 Porphyromonas gingivalis fimbrillin protein signature 340 355 1.9E-55 T 22-04-2016 IPR008110 Porphyromonas gingivalis fimbrillin protein GO:0005198|GO:0007155|GO:0009289|GO:0009405 PGJ_RS09570 f882e555df6f57b7d6d8be5f62df5643 387 PRINTS PR01737 Porphyromonas gingivalis fimbrillin protein signature 63 79 1.9E-55 T 22-04-2016 IPR008110 Porphyromonas gingivalis fimbrillin protein GO:0005198|GO:0007155|GO:0009289|GO:0009405 PGJ_RS09570 f882e555df6f57b7d6d8be5f62df5643 387 PRINTS PR01737 Porphyromonas gingivalis fimbrillin protein signature 274 290 1.9E-55 T 22-04-2016 IPR008110 Porphyromonas gingivalis fimbrillin protein GO:0005198|GO:0007155|GO:0009289|GO:0009405 PGJ_RS09570 f882e555df6f57b7d6d8be5f62df5643 387 Pfam PF06321 Major fimbrial subunit protein (FimA) 16 246 1.3E-50 T 22-04-2016 IPR029141 Major fimbrial subunit protein, N-terminal PGJ_RS06875 ff2ce5e502ceb90633456a25655586eb 457 Pfam PF02321 Outer membrane efflux protein 254 440 1.1E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS06875 ff2ce5e502ceb90633456a25655586eb 457 Pfam PF02321 Outer membrane efflux protein 84 231 1.4E-11 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS06875 ff2ce5e502ceb90633456a25655586eb 457 PANTHER PTHR30026 1 444 2.7E-58 T 22-04-2016 PGJ_RS06875 ff2ce5e502ceb90633456a25655586eb 457 Gene3D G3DSA:1.20.1600.10 5 86 9.7E-4 T 22-04-2016 PGJ_RS06875 ff2ce5e502ceb90633456a25655586eb 457 Gene3D G3DSA:1.20.1600.10 87 437 1.9E-47 T 22-04-2016 PGJ_RS06875 ff2ce5e502ceb90633456a25655586eb 457 SUPERFAMILY SSF56954 4 84 2.44E-58 T 22-04-2016 PGJ_RS06875 ff2ce5e502ceb90633456a25655586eb 457 SUPERFAMILY SSF56954 125 440 2.44E-58 T 22-04-2016 PGJ_RS06875 ff2ce5e502ceb90633456a25655586eb 457 PANTHER PTHR30026:SF7 1 444 2.7E-58 T 22-04-2016 PGJ_RS07970 fd8a3c7e7a61d3557eaef3bca04ba5c8 411 PANTHER PTHR23522:SF4 1 402 2.0E-207 T 22-04-2016 PGJ_RS07970 fd8a3c7e7a61d3557eaef3bca04ba5c8 411 Gene3D G3DSA:1.20.1250.20 10 192 1.2E-12 T 22-04-2016 PGJ_RS07970 fd8a3c7e7a61d3557eaef3bca04ba5c8 411 Gene3D G3DSA:1.20.1250.20 193 404 1.2E-20 T 22-04-2016 PGJ_RS07970 fd8a3c7e7a61d3557eaef3bca04ba5c8 411 PANTHER PTHR23522 1 402 2.0E-207 T 22-04-2016 PGJ_RS07970 fd8a3c7e7a61d3557eaef3bca04ba5c8 411 Pfam PF03825 Nucleoside H+ symporter 5 404 1.0E-139 T 22-04-2016 PGJ_RS07970 fd8a3c7e7a61d3557eaef3bca04ba5c8 411 TIGRFAM TIGR00889 2A0110: nucleoside transporter 5 406 8.4E-158 T 22-04-2016 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 PGJ_RS07970 fd8a3c7e7a61d3557eaef3bca04ba5c8 411 SUPERFAMILY SSF103473 8 403 2.53E-31 T 22-04-2016 IPR020846 Major facilitator superfamily domain PGJ_RS04055 6bc42107b00342008bfdbf54fac008fd 310 PANTHER PTHR33238 14 226 1.6E-36 T 22-04-2016 PGJ_RS04055 6bc42107b00342008bfdbf54fac008fd 310 PANTHER PTHR33238:SF1 14 226 1.6E-36 T 22-04-2016 PGJ_RS04055 6bc42107b00342008bfdbf54fac008fd 310 Pfam PF04023 FeoA domain 236 308 1.1E-14 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PGJ_RS04055 6bc42107b00342008bfdbf54fac008fd 310 SUPERFAMILY SSF50037 241 308 1.19E-14 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal PGJ_RS04055 6bc42107b00342008bfdbf54fac008fd 310 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 71 139 1.6E-25 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 PGJ_RS04055 6bc42107b00342008bfdbf54fac008fd 310 SUPERFAMILY SSF47979 71 143 7.85E-23 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 PGJ_RS04055 6bc42107b00342008bfdbf54fac008fd 310 Gene3D G3DSA:1.10.60.10 81 145 1.9E-24 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 PGJ_RS04055 6bc42107b00342008bfdbf54fac008fd 310 SMART SM00529 35 131 4.9E-5 T 22-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 PGJ_RS04055 6bc42107b00342008bfdbf54fac008fd 310 Gene3D G3DSA:1.10.10.10 16 78 3.4E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS04055 6bc42107b00342008bfdbf54fac008fd 310 SMART SM00899 236 310 8.4E-17 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PGJ_RS04055 6bc42107b00342008bfdbf54fac008fd 310 SMART SM00899 151 222 6.6E-4 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PGJ_RS05020 04f727bc98c5fc6c46a83a5b5ada9647 325 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 77 91 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PGJ_RS05020 04f727bc98c5fc6c46a83a5b5ada9647 325 Pfam PF00348 Polyprenyl synthetase 28 272 8.8E-68 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PGJ_RS05020 04f727bc98c5fc6c46a83a5b5ada9647 325 PANTHER PTHR12001:SF23 4 325 7.9E-94 T 22-04-2016 PGJ_RS05020 04f727bc98c5fc6c46a83a5b5ada9647 325 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 202 214 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PGJ_RS05020 04f727bc98c5fc6c46a83a5b5ada9647 325 PANTHER PTHR12001 4 325 7.9E-94 T 22-04-2016 IPR017446 Polyprenyl synthetase-related PGJ_RS05020 04f727bc98c5fc6c46a83a5b5ada9647 325 SUPERFAMILY SSF48576 4 324 2.16E-83 T 22-04-2016 IPR008949 Isoprenoid synthase domain PGJ_RS05020 04f727bc98c5fc6c46a83a5b5ada9647 325 Gene3D G3DSA:1.10.600.10 3 324 1.1E-84 T 22-04-2016 IPR008949 Isoprenoid synthase domain PGJ_RS06655 f0d1960ff3bbf07d12eba22913c489c0 344 Gene3D G3DSA:3.90.1150.10 254 341 4.5E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS06655 f0d1960ff3bbf07d12eba22913c489c0 344 Pfam PF01212 Beta-eliminating lyase 28 290 2.7E-30 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 PGJ_RS06655 f0d1960ff3bbf07d12eba22913c489c0 344 PANTHER PTHR10289:SF8 4 340 2.7E-133 T 22-04-2016 PGJ_RS06655 f0d1960ff3bbf07d12eba22913c489c0 344 Gene3D G3DSA:3.40.640.10 3 251 3.5E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS06655 f0d1960ff3bbf07d12eba22913c489c0 344 PANTHER PTHR10289 4 340 2.7E-133 T 22-04-2016 PGJ_RS06655 f0d1960ff3bbf07d12eba22913c489c0 344 SUPERFAMILY SSF53383 2 341 5.09E-78 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS03905 4757ed117e266a8fb64f07a8ef2d1bbf 150 SUPERFAMILY SSF55174 3 52 1.23E-10 T 22-04-2016 PGJ_RS03905 4757ed117e266a8fb64f07a8ef2d1bbf 150 SMART SM00363 3 61 4.1E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS03905 4757ed117e266a8fb64f07a8ef2d1bbf 150 Gene3D G3DSA:3.10.290.10 2 55 7.1E-15 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS03905 4757ed117e266a8fb64f07a8ef2d1bbf 150 Pfam PF01479 S4 domain 4 48 1.8E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS02315 b25f4bee9c8e26303793f1d48f66f454 304 Gene3D G3DSA:1.20.1540.10 21 212 1.5E-26 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PGJ_RS02315 b25f4bee9c8e26303793f1d48f66f454 304 SUPERFAMILY SSF144091 21 214 5.75E-30 T 22-04-2016 PGJ_RS02315 b25f4bee9c8e26303793f1d48f66f454 304 PANTHER PTHR22936 1 214 6.1E-22 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 PGJ_RS02315 b25f4bee9c8e26303793f1d48f66f454 304 Pfam PF01694 Rhomboid family 64 214 5.0E-23 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PGJ_RS00655 c9ff6cdcba541093d0b71c369c2f6791 258 PANTHER PTHR13696 1 256 5.9E-90 T 22-04-2016 PGJ_RS00655 c9ff6cdcba541093d0b71c369c2f6791 258 PANTHER PTHR13696:SF52 1 256 5.9E-90 T 22-04-2016 PGJ_RS00655 c9ff6cdcba541093d0b71c369c2f6791 258 Gene3D G3DSA:3.40.50.300 3 255 4.6E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00655 c9ff6cdcba541093d0b71c369c2f6791 258 SUPERFAMILY SSF52540 1 253 1.84E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00655 c9ff6cdcba541093d0b71c369c2f6791 258 Pfam PF13614 AAA domain 2 178 6.4E-68 T 22-04-2016 IPR025669 AAA domain PGJ_RS08165 19fb7d4bebd6d4a05f1f9ab0fe76a095 344 SUPERFAMILY SSF52540 137 272 1.02E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08165 19fb7d4bebd6d4a05f1f9ab0fe76a095 344 SUPERFAMILY SSF52821 13 148 2.49E-25 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS08165 19fb7d4bebd6d4a05f1f9ab0fe76a095 344 Gene3D G3DSA:3.40.50.300 138 267 2.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08165 19fb7d4bebd6d4a05f1f9ab0fe76a095 344 PANTHER PTHR30401 14 254 1.5E-66 T 22-04-2016 PGJ_RS08165 19fb7d4bebd6d4a05f1f9ab0fe76a095 344 Gene3D G3DSA:3.40.250.10 11 126 2.6E-33 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS08165 19fb7d4bebd6d4a05f1f9ab0fe76a095 344 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 14 313 3.6E-111 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 PGJ_RS08165 19fb7d4bebd6d4a05f1f9ab0fe76a095 344 Pfam PF00581 Rhodanese-like domain 12 125 6.2E-13 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS08165 19fb7d4bebd6d4a05f1f9ab0fe76a095 344 PANTHER PTHR30401:SF0 14 254 1.5E-66 T 22-04-2016 PGJ_RS08165 19fb7d4bebd6d4a05f1f9ab0fe76a095 344 SMART SM00450 1 129 5.0E-20 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS01090 a68979e09119a68c6e227bdb30cf59cc 232 Gene3D G3DSA:3.40.50.1000 100 231 1.7E-37 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS01090 a68979e09119a68c6e227bdb30cf59cc 232 SUPERFAMILY SSF56784 1 232 1.93E-42 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS01090 a68979e09119a68c6e227bdb30cf59cc 232 Gene3D G3DSA:1.10.150.240 18 80 2.9E-9 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PGJ_RS01090 a68979e09119a68c6e227bdb30cf59cc 232 PANTHER PTHR12725 2 232 2.2E-35 T 22-04-2016 PGJ_RS01090 a68979e09119a68c6e227bdb30cf59cc 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 202 5.7E-21 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS01090 a68979e09119a68c6e227bdb30cf59cc 232 PANTHER PTHR12725:SF57 2 232 2.2E-35 T 22-04-2016 PGJ_RS01090 a68979e09119a68c6e227bdb30cf59cc 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 197 1.1E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PGJ_RS01090 a68979e09119a68c6e227bdb30cf59cc 232 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 2 232 3.4E-103 T 22-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 PGJ_RS01680 80d9f76c53b9423c57bf607c46a44e4b 129 PANTHER PTHR23089 1 97 7.1E-31 T 22-04-2016 IPR001310 Histidine triad (HIT) protein PGJ_RS01680 80d9f76c53b9423c57bf607c46a44e4b 129 PRINTS PR00332 Histidine triad family signature 3 19 1.9E-14 T 22-04-2016 IPR001310 Histidine triad (HIT) protein PGJ_RS01680 80d9f76c53b9423c57bf607c46a44e4b 129 PRINTS PR00332 Histidine triad family signature 86 96 1.9E-14 T 22-04-2016 IPR001310 Histidine triad (HIT) protein PGJ_RS01680 80d9f76c53b9423c57bf607c46a44e4b 129 PRINTS PR00332 Histidine triad family signature 24 42 1.9E-14 T 22-04-2016 IPR001310 Histidine triad (HIT) protein PGJ_RS01680 80d9f76c53b9423c57bf607c46a44e4b 129 SUPERFAMILY SSF54197 1 129 2.17E-33 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 PGJ_RS01680 80d9f76c53b9423c57bf607c46a44e4b 129 Gene3D G3DSA:3.30.428.10 2 128 1.0E-28 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 PGJ_RS01680 80d9f76c53b9423c57bf607c46a44e4b 129 Pfam PF01230 HIT domain 10 99 1.9E-16 T 22-04-2016 IPR001310 Histidine triad (HIT) protein PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 PANTHER PTHR11390:SF21 506 619 1.9E-142 T 22-04-2016 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 PANTHER PTHR11390:SF21 1 489 1.9E-142 T 22-04-2016 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 SMART SM00493 1 131 1.1E-10 T 22-04-2016 IPR006171 Toprim domain PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 Pfam PF01751 Toprim domain 4 139 5.2E-12 T 22-04-2016 IPR006171 Toprim domain PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 Gene3D G3DSA:2.70.20.10 256 326 1.3E-11 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 SMART SM00437 264 543 5.6E-63 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 SMART SM00436 131 221 1.4E-32 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 Pfam PF01131 DNA topoisomerase 157 577 2.3E-115 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 2.5E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 105 118 2.5E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 385 401 2.5E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 506 520 2.5E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 306 315 2.5E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 Pfam PF13342 C-terminal repeat of topoisomerase 630 689 5.2E-16 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 PANTHER PTHR11390 506 619 1.9E-142 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 PANTHER PTHR11390 1 489 1.9E-142 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 SUPERFAMILY SSF56712 1 592 3.4E-153 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 Gene3D G3DSA:3.40.50.140 1 158 9.1E-40 T 22-04-2016 IPR006171 Toprim domain PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 Gene3D G3DSA:1.10.460.10 476 592 2.1E-49 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 Gene3D G3DSA:1.10.460.10 161 215 2.1E-49 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 Gene3D G3DSA:2.70.20.10 218 247 1.4E-24 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PGJ_RS08785 bdeaee9d792699c1f54a0560b96f310a 697 Gene3D G3DSA:2.70.20.10 353 472 1.4E-24 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 PANTHER PTHR11390:SF21 1 500 1.3E-163 T 22-04-2016 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 PANTHER PTHR11390:SF21 517 603 1.3E-163 T 22-04-2016 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 SUPERFAMILY SSF56712 1 603 1.19E-160 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 Gene3D G3DSA:1.10.460.10 160 216 1.0E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 Gene3D G3DSA:1.10.460.10 487 603 1.0E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 SMART SM00437 267 554 6.5E-76 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 Gene3D G3DSA:3.40.50.140 1 156 1.5E-40 T 22-04-2016 IPR006171 Toprim domain PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 SMART SM00436 131 222 2.5E-30 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 105 118 4.2E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 517 531 4.2E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 386 402 4.2E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 309 318 4.2E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 192 210 4.2E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 Pfam PF13342 C-terminal repeat of topoisomerase 640 699 9.3E-19 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 Pfam PF01751 Toprim domain 3 139 5.9E-12 T 22-04-2016 IPR006171 Toprim domain PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 Pfam PF01131 DNA topoisomerase 158 588 8.0E-118 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 PANTHER PTHR11390 1 500 1.3E-163 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 PANTHER PTHR11390 517 603 1.3E-163 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 SMART SM00493 1 131 5.2E-10 T 22-04-2016 IPR006171 Toprim domain PGJ_RS05575 c0a8bfeabe3df124325da7c3e6c2c2b5 709 Gene3D G3DSA:1.10.290.10 278 399 6.4E-33 T 22-04-2016 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PGJ_RS05590 0431a2af96e075f8bf2f12d1d5cbbab9 385 Gene3D G3DSA:3.40.47.10 1 205 9.9E-31 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PGJ_RS05590 0431a2af96e075f8bf2f12d1d5cbbab9 385 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 283 376 1.4E-13 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PGJ_RS05590 0431a2af96e075f8bf2f12d1d5cbbab9 385 PANTHER PTHR34069 189 385 7.4E-34 T 22-04-2016 PGJ_RS05590 0431a2af96e075f8bf2f12d1d5cbbab9 385 PANTHER PTHR34069 1 171 7.4E-34 T 22-04-2016 PGJ_RS05590 0431a2af96e075f8bf2f12d1d5cbbab9 385 PANTHER PTHR34069:SF2 189 385 7.4E-34 T 22-04-2016 PGJ_RS05590 0431a2af96e075f8bf2f12d1d5cbbab9 385 PANTHER PTHR34069:SF2 1 171 7.4E-34 T 22-04-2016 PGJ_RS05590 0431a2af96e075f8bf2f12d1d5cbbab9 385 Gene3D G3DSA:3.40.47.10 237 377 1.4E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PGJ_RS05590 0431a2af96e075f8bf2f12d1d5cbbab9 385 SUPERFAMILY SSF53901 4 205 1.37E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PGJ_RS05590 0431a2af96e075f8bf2f12d1d5cbbab9 385 SUPERFAMILY SSF53901 259 377 6.0E-21 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PGJ_RS05590 0431a2af96e075f8bf2f12d1d5cbbab9 385 SUPERFAMILY SSF53901 190 206 6.0E-21 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 194 5.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 206 5.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 178 5.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 SMART SM00421 161 218 2.4E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 PANTHER PTHR26402:SF151 2 224 1.3E-50 T 22-04-2016 PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 SUPERFAMILY SSF46894 156 225 1.8E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 PANTHER PTHR26402 2 224 1.3E-50 T 22-04-2016 PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 SMART SM00448 2 117 7.2E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 Pfam PF00072 Response regulator receiver domain 4 117 1.1E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 Gene3D G3DSA:3.40.50.2300 1 165 5.5E-26 T 22-04-2016 PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 218 5.5E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 Gene3D G3DSA:1.10.10.10 166 224 5.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS02205 4eebe9057ff4d626770b918b190e7aac 227 SUPERFAMILY SSF52172 1 133 7.54E-23 T 22-04-2016 IPR011006 CheY-like superfamily PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 Gene3D G3DSA:1.25.40.10 44 131 4.4E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 Gene3D G3DSA:1.25.40.10 132 195 9.2E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 PANTHER PTHR23083 54 276 3.5E-32 T 22-04-2016 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 Pfam PF13181 Tetratricopeptide repeat 116 145 0.0028 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 SUPERFAMILY SSF48452 172 275 5.96E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 SMART SM00028 112 145 7.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 SMART SM00028 146 179 1.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 SMART SM00028 78 111 0.0096 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 SMART SM00028 249 282 440.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 SMART SM00028 214 247 110.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 SMART SM00028 180 213 2.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 SMART SM00028 41 74 74.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 SUPERFAMILY SSF48452 38 98 4.01E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 Gene3D G3DSA:1.25.40.10 196 275 2.3E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 Pfam PF13432 Tetratricopeptide repeat 150 213 3.7E-6 T 22-04-2016 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 Pfam PF13432 Tetratricopeptide repeat 51 111 1.9E-8 T 22-04-2016 PGJ_RS08560 9512c63748b6244ee0ffe2ebe9af966e 295 SUPERFAMILY SSF48452 80 201 2.06E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09560 4b96c9bfbc7183ad2bef962723ccd624 193 Pfam PF12099 Protein of unknown function (DUF3575) 14 192 1.7E-75 T 22-04-2016 IPR021958 Protein of unknown function DUF3575 PGJ_RS09560 4b96c9bfbc7183ad2bef962723ccd624 193 SUPERFAMILY SSF103515 42 163 1.29E-5 T 22-04-2016 IPR005546 Autotransporter beta-domain PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 SUPERFAMILY SSF56935 713 830 1.24E-33 T 22-04-2016 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 SUPERFAMILY SSF56935 323 599 1.24E-33 T 22-04-2016 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 SUPERFAMILY SSF56935 633 676 1.24E-33 T 22-04-2016 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 SUPERFAMILY SSF56935 232 285 1.24E-33 T 22-04-2016 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 SUPERFAMILY SSF56935 112 199 1.24E-33 T 22-04-2016 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 SUPERFAMILY SSF56935 876 935 1.24E-33 T 22-04-2016 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 Gene3D G3DSA:2.60.40.1120 37 113 2.3E-13 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 Pfam PF13715 CarboxypepD_reg-like domain 38 123 1.0E-17 T 22-04-2016 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 264 6.2E-7 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 SUPERFAMILY SSF49464 36 121 7.06E-14 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 Gene3D G3DSA:2.40.170.20 711 843 1.9E-16 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 Gene3D G3DSA:2.40.170.20 883 927 1.9E-16 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 Gene3D G3DSA:2.40.170.20 359 675 1.9E-16 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 PANTHER PTHR30069:SF9 38 204 4.6E-23 T 22-04-2016 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 PANTHER PTHR30069:SF9 224 285 4.6E-23 T 22-04-2016 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 PANTHER PTHR30069 38 204 4.6E-23 T 22-04-2016 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 PANTHER PTHR30069 224 285 4.6E-23 T 22-04-2016 PGJ_RS04140 722fe6795c3176b045e1743575e86c30 936 Gene3D G3DSA:2.170.130.10 135 268 1.5E-10 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS04290 b6c3e61447edaea8723cca80a6ef06d5 168 Gene3D G3DSA:1.10.10.10 105 166 1.3E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS04290 b6c3e61447edaea8723cca80a6ef06d5 168 SUPERFAMILY SSF88659 87 165 6.92E-10 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS04290 b6c3e61447edaea8723cca80a6ef06d5 168 Gene3D G3DSA:1.10.1740.10 4 91 2.1E-19 T 22-04-2016 PGJ_RS04290 b6c3e61447edaea8723cca80a6ef06d5 168 Pfam PF04542 Sigma-70 region 2 13 75 9.6E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS04290 b6c3e61447edaea8723cca80a6ef06d5 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 162 5.6E-29 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS04290 b6c3e61447edaea8723cca80a6ef06d5 168 PANTHER PTHR30173 5 168 2.2E-31 T 22-04-2016 PGJ_RS04290 b6c3e61447edaea8723cca80a6ef06d5 168 Pfam PF08281 Sigma-70, region 4 109 158 3.5E-8 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS04290 b6c3e61447edaea8723cca80a6ef06d5 168 SUPERFAMILY SSF88946 4 90 7.85E-21 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS01360 a59d898921174d939e2bbd877de15e5c 214 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 173 214 8.3E-19 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PGJ_RS01360 a59d898921174d939e2bbd877de15e5c 214 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 214 9.6E-77 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PGJ_RS01360 a59d898921174d939e2bbd877de15e5c 214 Gene3D G3DSA:2.30.110.10 17 214 8.1E-73 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PGJ_RS01360 a59d898921174d939e2bbd877de15e5c 214 PANTHER PTHR10851 1 214 6.1E-89 T 22-04-2016 PGJ_RS01360 a59d898921174d939e2bbd877de15e5c 214 SUPERFAMILY SSF50475 17 214 1.54E-59 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PGJ_RS01360 a59d898921174d939e2bbd877de15e5c 214 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 42 118 5.7E-21 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PGJ_RS01360 a59d898921174d939e2bbd877de15e5c 214 PIRSF PIRSF000190 2 214 4.7E-72 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PGJ_RS01360 a59d898921174d939e2bbd877de15e5c 214 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 183 196 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PGJ_RS01360 a59d898921174d939e2bbd877de15e5c 214 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 11 214 36.52 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PGJ_RS01360 a59d898921174d939e2bbd877de15e5c 214 PANTHER PTHR10851:SF0 1 214 6.1E-89 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PGJ_RS01595 93887598dc37e54e84d57a4b32f0d306 455 SUPERFAMILY SSF56954 3 453 6.41E-65 T 22-04-2016 PGJ_RS01595 93887598dc37e54e84d57a4b32f0d306 455 PANTHER PTHR30026:SF4 30 452 7.3E-49 T 22-04-2016 PGJ_RS01595 93887598dc37e54e84d57a4b32f0d306 455 Pfam PF02321 Outer membrane efflux protein 256 440 3.0E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS01595 93887598dc37e54e84d57a4b32f0d306 455 Pfam PF02321 Outer membrane efflux protein 37 226 5.9E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS01595 93887598dc37e54e84d57a4b32f0d306 455 PANTHER PTHR30026 30 452 7.3E-49 T 22-04-2016 PGJ_RS01595 93887598dc37e54e84d57a4b32f0d306 455 Gene3D G3DSA:1.20.1600.10 34 452 3.5E-62 T 22-04-2016 PGJ_RS00705 ebdaa0b1f7f1667cd6de2e70e2bf5a61 378 PANTHER PTHR11482:SF38 3 377 1.0E-179 T 22-04-2016 PGJ_RS00705 ebdaa0b1f7f1667cd6de2e70e2bf5a61 378 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 259 354 1.8E-11 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 PGJ_RS00705 ebdaa0b1f7f1667cd6de2e70e2bf5a61 378 PANTHER PTHR11482 3 377 1.0E-179 T 22-04-2016 PGJ_RS00705 ebdaa0b1f7f1667cd6de2e70e2bf5a61 378 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 7 376 1.1E-146 T 22-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 PGJ_RS00705 ebdaa0b1f7f1667cd6de2e70e2bf5a61 378 Gene3D G3DSA:2.40.37.10 238 356 3.0E-22 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PGJ_RS00705 ebdaa0b1f7f1667cd6de2e70e2bf5a61 378 PIRSF PIRSF038941 1 378 6.1E-147 T 22-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 PGJ_RS00705 ebdaa0b1f7f1667cd6de2e70e2bf5a61 378 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 242 2.6E-4 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 PGJ_RS00705 ebdaa0b1f7f1667cd6de2e70e2bf5a61 378 Gene3D G3DSA:3.20.20.10 33 237 1.7E-17 T 22-04-2016 IPR029066 PLP-binding barrel PGJ_RS00705 ebdaa0b1f7f1667cd6de2e70e2bf5a61 378 SUPERFAMILY SSF50621 213 367 3.14E-29 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PGJ_RS00705 ebdaa0b1f7f1667cd6de2e70e2bf5a61 378 SUPERFAMILY SSF51419 16 247 2.04E-44 T 22-04-2016 IPR029066 PLP-binding barrel PGJ_RS00280 61d1c3a02b2ecedb0888f789f3133bc0 392 Gene3D G3DSA:2.40.50.100 196 228 2.6E-10 T 22-04-2016 PGJ_RS00280 61d1c3a02b2ecedb0888f789f3133bc0 392 Gene3D G3DSA:2.40.50.100 97 131 2.6E-10 T 22-04-2016 PGJ_RS00280 61d1c3a02b2ecedb0888f789f3133bc0 392 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 257 1.5E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PGJ_RS00280 61d1c3a02b2ecedb0888f789f3133bc0 392 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 71 377 1.1E-44 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PGJ_RS00280 61d1c3a02b2ecedb0888f789f3133bc0 392 PANTHER PTHR30097 46 392 5.7E-64 T 22-04-2016 PGJ_RS00280 61d1c3a02b2ecedb0888f789f3133bc0 392 PANTHER PTHR30097:SF5 46 392 5.7E-64 T 22-04-2016 PGJ_RS00280 61d1c3a02b2ecedb0888f789f3133bc0 392 SUPERFAMILY SSF111369 96 308 2.62E-17 T 22-04-2016 PGJ_RS06995 a54069a0a2cd8e0560595b43e532ee51 176 Pfam PF14109 GldH lipoprotein 38 160 6.9E-30 T 22-04-2016 IPR020018 Gliding motility-associated lipoprotein, GldH PGJ_RS06995 a54069a0a2cd8e0560595b43e532ee51 176 TIGRFAM TIGR03511 GldH_lipo: gliding motility-associated lipoprotein GldH 6 162 3.7E-61 T 22-04-2016 IPR020018 Gliding motility-associated lipoprotein, GldH PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 Gene3D G3DSA:3.30.230.10 214 380 1.0E-45 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 44 174 1.1E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 Pfam PF00204 DNA gyrase B 236 370 6.5E-29 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 SUPERFAMILY SSF55874 10 209 9.56E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 574 633 3.6E-10 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 ProSitePatterns PS00177 DNA topoisomerase II signature. 414 422 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PANTHER PTHR10169 554 643 9.2E-261 T 22-04-2016 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PANTHER PTHR10169 9 533 9.2E-261 T 22-04-2016 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 SMART SM00387 41 176 1.2E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PANTHER PTHR10169:SF28 554 643 9.2E-261 T 22-04-2016 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PANTHER PTHR10169:SF28 9 533 9.2E-261 T 22-04-2016 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PRINTS PR00418 DNA topoisomerase II family signature 412 426 2.0E-49 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PRINTS PR00418 DNA topoisomerase II family signature 512 524 2.0E-49 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PRINTS PR00418 DNA topoisomerase II family signature 114 128 2.0E-49 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PRINTS PR00418 DNA topoisomerase II family signature 474 490 2.0E-49 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PRINTS PR00418 DNA topoisomerase II family signature 492 509 2.0E-49 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PRINTS PR00418 DNA topoisomerase II family signature 578 594 2.0E-49 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PRINTS PR00418 DNA topoisomerase II family signature 79 92 2.0E-49 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PRINTS PR00418 DNA topoisomerase II family signature 256 269 2.0E-49 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 PRINTS PR00418 DNA topoisomerase II family signature 45 60 2.0E-49 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 SUPERFAMILY SSF56719 397 635 5.75E-54 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 Pfam PF01751 Toprim domain 412 518 1.4E-12 T 22-04-2016 IPR006171 Toprim domain PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 SMART SM00433 45 638 1.2E-141 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 Gene3D G3DSA:3.30.565.10 12 207 1.5E-51 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 SUPERFAMILY SSF54211 225 371 2.85E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS07135 6874cb638c522feeb0fea680f14fc175 644 Gene3D G3DSA:3.40.50.670 399 626 6.1E-55 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS00940 1fdc57b826d6c8f2c3df64fede46737e 261 Pfam PF01226 Formate/nitrite transporter 8 252 4.6E-80 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 PGJ_RS00940 1fdc57b826d6c8f2c3df64fede46737e 261 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 164 174 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site PGJ_RS00940 1fdc57b826d6c8f2c3df64fede46737e 261 PANTHER PTHR30520:SF0 5 251 7.2E-95 T 22-04-2016 PGJ_RS00940 1fdc57b826d6c8f2c3df64fede46737e 261 Gene3D G3DSA:1.20.1080.10 22 256 7.3E-83 T 22-04-2016 IPR023271 Aquaporin-like PGJ_RS00940 1fdc57b826d6c8f2c3df64fede46737e 261 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 79 88 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site PGJ_RS00940 1fdc57b826d6c8f2c3df64fede46737e 261 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 22 253 2.6E-74 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 PGJ_RS00940 1fdc57b826d6c8f2c3df64fede46737e 261 PANTHER PTHR30520 5 251 7.2E-95 T 22-04-2016 PGJ_RS09895 82b45b8823bd9c0f6f94c9a4061ef3d4 150 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 14 149 21.281 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PGJ_RS09895 82b45b8823bd9c0f6f94c9a4061ef3d4 150 SUPERFAMILY SSF53098 13 148 5.31E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS09895 82b45b8823bd9c0f6f94c9a4061ef3d4 150 PANTHER PTHR33317 13 150 1.5E-33 T 22-04-2016 PGJ_RS09895 82b45b8823bd9c0f6f94c9a4061ef3d4 150 Pfam PF03652 Holliday junction resolvase 15 146 3.6E-36 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PGJ_RS09895 82b45b8823bd9c0f6f94c9a4061ef3d4 150 SMART SM00732 14 112 1.1E-16 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PGJ_RS09895 82b45b8823bd9c0f6f94c9a4061ef3d4 150 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 17 146 4.3E-20 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PGJ_RS09895 82b45b8823bd9c0f6f94c9a4061ef3d4 150 Gene3D G3DSA:3.30.420.140 13 148 1.5E-38 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PGJ_RS02025 e55b7993f14edc3436e08964adc3b604 207 Gene3D G3DSA:1.10.10.10 150 206 1.2E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS02025 e55b7993f14edc3436e08964adc3b604 207 Pfam PF00027 Cyclic nucleotide-binding domain 27 115 3.6E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain PGJ_RS02025 e55b7993f14edc3436e08964adc3b604 207 SMART SM00100 8 128 0.0051 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain PGJ_RS02025 e55b7993f14edc3436e08964adc3b604 207 Pfam PF13545 Crp-like helix-turn-helix domain 150 206 1.4E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PGJ_RS02025 e55b7993f14edc3436e08964adc3b604 207 PANTHER PTHR24567 13 207 1.0E-27 T 22-04-2016 PGJ_RS02025 e55b7993f14edc3436e08964adc3b604 207 SUPERFAMILY SSF51206 13 144 5.11E-25 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like PGJ_RS02025 e55b7993f14edc3436e08964adc3b604 207 SMART SM00419 162 207 7.3E-5 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PGJ_RS02025 e55b7993f14edc3436e08964adc3b604 207 Gene3D G3DSA:2.60.120.10 13 143 2.2E-27 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PGJ_RS02025 e55b7993f14edc3436e08964adc3b604 207 SUPERFAMILY SSF46785 146 206 2.13E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS02025 e55b7993f14edc3436e08964adc3b604 207 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 9.7E-5 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PGJ_RS02025 e55b7993f14edc3436e08964adc3b604 207 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 9.7E-5 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PGJ_RS02405 0b7dccfa08cc8312bf55445016cb0d33 379 Gene3D G3DSA:2.40.160.10 66 379 2.3E-22 T 22-04-2016 IPR023614 Porin domain PGJ_RS02405 0b7dccfa08cc8312bf55445016cb0d33 379 SUPERFAMILY SSF56935 66 377 7.33E-15 T 22-04-2016 PGJ_RS02405 0b7dccfa08cc8312bf55445016cb0d33 379 Pfam PF07396 Phosphate-selective porin O and P 88 379 2.9E-10 T 22-04-2016 IPR010870 Phosphate-selective porin O/P PGJ_RS08105 e8e7fe10e27b41b27f155a7584c198ec 135 PANTHER PTHR34039:SF1 1 122 9.3E-26 T 22-04-2016 PGJ_RS08105 e8e7fe10e27b41b27f155a7584c198ec 135 PANTHER PTHR34039 1 122 9.3E-26 T 22-04-2016 PGJ_RS08105 e8e7fe10e27b41b27f155a7584c198ec 135 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 113 16.731 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 PGJ_RS08105 e8e7fe10e27b41b27f155a7584c198ec 135 Gene3D G3DSA:3.40.1350.10 11 118 6.7E-28 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 PGJ_RS08105 e8e7fe10e27b41b27f155a7584c198ec 135 Pfam PF02021 Uncharacterised protein family UPF0102 11 100 2.2E-23 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 PGJ_RS08105 e8e7fe10e27b41b27f155a7584c198ec 135 SUPERFAMILY SSF52980 5 117 4.51E-20 T 22-04-2016 IPR011335 Restriction endonuclease type II-like PGJ_RS08360 b0cf868a7ec150981ef4ab8e3191c4b7 246 Gene3D G3DSA:3.30.1140.32 107 206 1.4E-43 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 PGJ_RS08360 b0cf868a7ec150981ef4ab8e3191c4b7 246 SUPERFAMILY SSF54814 2 105 3.14E-34 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PGJ_RS08360 b0cf868a7ec150981ef4ab8e3191c4b7 246 SMART SM00322 59 124 0.0016 T 22-04-2016 IPR004087 K Homology domain GO:0003676 PGJ_RS08360 b0cf868a7ec150981ef4ab8e3191c4b7 246 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site PGJ_RS08360 b0cf868a7ec150981ef4ab8e3191c4b7 246 SUPERFAMILY SSF54821 107 205 7.59E-39 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 PGJ_RS08360 b0cf868a7ec150981ef4ab8e3191c4b7 246 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 36.156 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PGJ_RS08360 b0cf868a7ec150981ef4ab8e3191c4b7 246 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 8.9E-85 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PGJ_RS08360 b0cf868a7ec150981ef4ab8e3191c4b7 246 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 2.4E-37 T 22-04-2016 PGJ_RS08360 b0cf868a7ec150981ef4ab8e3191c4b7 246 Gene3D G3DSA:3.30.300.20 18 106 2.8E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PGJ_RS08360 b0cf868a7ec150981ef4ab8e3191c4b7 246 PANTHER PTHR11760 2 241 7.0E-121 T 22-04-2016 PGJ_RS08360 b0cf868a7ec150981ef4ab8e3191c4b7 246 Pfam PF07650 KH domain 38 110 1.0E-17 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 PGJ_RS08360 b0cf868a7ec150981ef4ab8e3191c4b7 246 PANTHER PTHR11760:SF19 2 241 7.0E-121 T 22-04-2016 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 Gene3D G3DSA:1.20.120.140 2 89 3.2E-30 T 22-04-2016 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.0E-19 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 SMART SM00382 98 300 6.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 SUPERFAMILY SSF52540 42 353 1.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 PANTHER PTHR11564:SF7 1 430 9.5E-256 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 Pfam PF02978 Signal peptide binding domain 326 423 2.6E-33 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 424 1.8E-193 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 Pfam PF00448 SRP54-type protein, GTPase domain 99 295 1.6E-75 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 Gene3D G3DSA:1.10.260.30 326 427 2.4E-38 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 Gene3D G3DSA:3.40.50.300 97 296 4.9E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 438 33.374 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 SMART SM00963 1 86 9.5E-30 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 SMART SM00962 99 295 4.2E-117 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 SUPERFAMILY SSF47446 326 426 9.97E-35 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 PGJ_RS03715 091474cccac4486299237b72d473c2b3 445 PANTHER PTHR11564 1 430 9.5E-256 T 22-04-2016 PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 SMART SM00471 68 180 2.0E-7 T 22-04-2016 IPR003607 HD/PDEase domain PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 53 756 1.4E-188 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 SUPERFAMILY SSF81271 406 478 1.61E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 Gene3D G3DSA:3.10.20.30 419 481 5.1E-23 T 22-04-2016 IPR012675 Beta-grasp domain PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 Gene3D G3DSA:3.30.460.10 204 357 1.4E-41 T 22-04-2016 PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 Pfam PF04607 Region found in RelA / SpoT proteins 262 377 4.7E-32 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 Pfam PF13291 ACT domain 684 760 6.3E-16 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 PANTHER PTHR21262 1 762 1.9E-273 T 22-04-2016 PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 Pfam PF02824 TGS domain 420 477 8.6E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 Pfam PF13328 HD domain 53 202 3.4E-44 T 22-04-2016 IPR003607 HD/PDEase domain PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 SMART SM00954 262 378 1.0E-50 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 SUPERFAMILY SSF81301 208 423 1.19E-52 T 22-04-2016 PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 Gene3D G3DSA:3.30.70.260 687 751 2.5E-4 T 22-04-2016 PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 SUPERFAMILY SSF109604 38 218 2.35E-62 T 22-04-2016 PGJ_RS07840 384e9c054c9180ce7980dd7dab91d92c 762 PANTHER PTHR21262:SF0 1 762 1.9E-273 T 22-04-2016 PGJ_RS00695 cfbe9779df2fb8f0e52a967d5af7d91e 434 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 429 3.4E-109 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 PGJ_RS00695 cfbe9779df2fb8f0e52a967d5af7d91e 434 SUPERFAMILY SSF102114 129 364 2.35E-53 T 22-04-2016 PGJ_RS00695 cfbe9779df2fb8f0e52a967d5af7d91e 434 SMART SM00729 136 355 9.9E-46 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PGJ_RS00695 cfbe9779df2fb8f0e52a967d5af7d91e 434 PANTHER PTHR11918:SF57 2 434 9.3E-163 T 22-04-2016 PGJ_RS00695 cfbe9779df2fb8f0e52a967d5af7d91e 434 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 432 59.398 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PGJ_RS00695 cfbe9779df2fb8f0e52a967d5af7d91e 434 Pfam PF04055 Radical SAM superfamily 142 312 4.2E-23 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS00695 cfbe9779df2fb8f0e52a967d5af7d91e 434 Gene3D G3DSA:2.40.50.140 370 433 1.8E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS00695 cfbe9779df2fb8f0e52a967d5af7d91e 434 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 429 2.3E-130 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PGJ_RS00695 cfbe9779df2fb8f0e52a967d5af7d91e 434 PANTHER PTHR11918 2 434 9.3E-163 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein PGJ_RS00695 cfbe9779df2fb8f0e52a967d5af7d91e 434 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 140 160 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PGJ_RS00695 cfbe9779df2fb8f0e52a967d5af7d91e 434 Pfam PF00919 Uncharacterized protein family UPF0004 5 106 3.1E-22 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 PGJ_RS00695 cfbe9779df2fb8f0e52a967d5af7d91e 434 Gene3D G3DSA:3.80.30.20 134 367 4.7E-75 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PGJ_RS06840 b637fc501a7f3cff80817b2f89b92329 262 Gene3D G3DSA:3.30.420.10 57 219 4.1E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS06840 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552 14 221 4.2E-39 T 22-04-2016 PGJ_RS06840 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552:SF23 14 221 4.2E-39 T 22-04-2016 PGJ_RS06840 b637fc501a7f3cff80817b2f89b92329 262 Pfam PF00665 Integrase core domain 62 181 1.4E-22 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS06840 b637fc501a7f3cff80817b2f89b92329 262 SUPERFAMILY SSF53098 57 224 7.44E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS02240 b637fc501a7f3cff80817b2f89b92329 262 Gene3D G3DSA:3.30.420.10 57 219 4.1E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS02240 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552 14 221 4.2E-39 T 22-04-2016 PGJ_RS02240 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552:SF23 14 221 4.2E-39 T 22-04-2016 PGJ_RS02240 b637fc501a7f3cff80817b2f89b92329 262 Pfam PF00665 Integrase core domain 62 181 1.4E-22 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS02240 b637fc501a7f3cff80817b2f89b92329 262 SUPERFAMILY SSF53098 57 224 7.44E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS05390 b637fc501a7f3cff80817b2f89b92329 262 Gene3D G3DSA:3.30.420.10 57 219 4.1E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS05390 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552 14 221 4.2E-39 T 22-04-2016 PGJ_RS05390 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552:SF23 14 221 4.2E-39 T 22-04-2016 PGJ_RS05390 b637fc501a7f3cff80817b2f89b92329 262 Pfam PF00665 Integrase core domain 62 181 1.4E-22 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS05390 b637fc501a7f3cff80817b2f89b92329 262 SUPERFAMILY SSF53098 57 224 7.44E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS00805 b637fc501a7f3cff80817b2f89b92329 262 Gene3D G3DSA:3.30.420.10 57 219 4.1E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS00805 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552 14 221 4.2E-39 T 22-04-2016 PGJ_RS00805 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552:SF23 14 221 4.2E-39 T 22-04-2016 PGJ_RS00805 b637fc501a7f3cff80817b2f89b92329 262 Pfam PF00665 Integrase core domain 62 181 1.4E-22 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS00805 b637fc501a7f3cff80817b2f89b92329 262 SUPERFAMILY SSF53098 57 224 7.44E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS09125 b637fc501a7f3cff80817b2f89b92329 262 Gene3D G3DSA:3.30.420.10 57 219 4.1E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS09125 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552 14 221 4.2E-39 T 22-04-2016 PGJ_RS09125 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552:SF23 14 221 4.2E-39 T 22-04-2016 PGJ_RS09125 b637fc501a7f3cff80817b2f89b92329 262 Pfam PF00665 Integrase core domain 62 181 1.4E-22 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS09125 b637fc501a7f3cff80817b2f89b92329 262 SUPERFAMILY SSF53098 57 224 7.44E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS05890 b637fc501a7f3cff80817b2f89b92329 262 Gene3D G3DSA:3.30.420.10 57 219 4.1E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS05890 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552 14 221 4.2E-39 T 22-04-2016 PGJ_RS05890 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552:SF23 14 221 4.2E-39 T 22-04-2016 PGJ_RS05890 b637fc501a7f3cff80817b2f89b92329 262 Pfam PF00665 Integrase core domain 62 181 1.4E-22 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS05890 b637fc501a7f3cff80817b2f89b92329 262 SUPERFAMILY SSF53098 57 224 7.44E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS09470 b637fc501a7f3cff80817b2f89b92329 262 Gene3D G3DSA:3.30.420.10 57 219 4.1E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS09470 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552 14 221 4.2E-39 T 22-04-2016 PGJ_RS09470 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552:SF23 14 221 4.2E-39 T 22-04-2016 PGJ_RS09470 b637fc501a7f3cff80817b2f89b92329 262 Pfam PF00665 Integrase core domain 62 181 1.4E-22 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS09470 b637fc501a7f3cff80817b2f89b92329 262 SUPERFAMILY SSF53098 57 224 7.44E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS01380 b637fc501a7f3cff80817b2f89b92329 262 Gene3D G3DSA:3.30.420.10 57 219 4.1E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS01380 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552 14 221 4.2E-39 T 22-04-2016 PGJ_RS01380 b637fc501a7f3cff80817b2f89b92329 262 PANTHER PTHR32552:SF23 14 221 4.2E-39 T 22-04-2016 PGJ_RS01380 b637fc501a7f3cff80817b2f89b92329 262 Pfam PF00665 Integrase core domain 62 181 1.4E-22 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS01380 b637fc501a7f3cff80817b2f89b92329 262 SUPERFAMILY SSF53098 57 224 7.44E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 Gene3D G3DSA:3.10.20.30 266 367 2.5E-50 T 22-04-2016 IPR012675 Beta-grasp domain PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 Pfam PF06071 Protein of unknown function (DUF933) 283 366 1.1E-41 T 22-04-2016 IPR013029 Domain of unknown function DUF933 PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 367 1.1E-153 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 PIRSF PIRSF006641 1 367 1.5E-164 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 367 44.282 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.4E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 Gene3D G3DSA:1.10.150.300 131 202 1.5E-27 T 22-04-2016 IPR023192 TGS-like domain PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 3.2E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.2E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 3.2E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 3.2E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 Gene3D G3DSA:3.40.50.300 4 130 1.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 Gene3D G3DSA:3.40.50.300 203 265 1.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 SUPERFAMILY SSF81271 283 364 9.16E-37 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 PANTHER PTHR23305 1 367 1.6E-211 T 22-04-2016 PGJ_RS00205 48056fbc9c93e8b62d9588e3d806302a 367 SUPERFAMILY SSF52540 3 305 3.75E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 Gene3D G3DSA:3.90.190.20 318 460 2.2E-16 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 PRINTS PR00992 Alanine racemase signature 522 540 3.4E-39 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 PRINTS PR00992 Alanine racemase signature 713 728 3.4E-39 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 PRINTS PR00992 Alanine racemase signature 752 769 3.4E-39 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 PRINTS PR00992 Alanine racemase signature 617 628 3.4E-39 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 PRINTS PR00992 Alanine racemase signature 486 502 3.4E-39 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 PRINTS PR00992 Alanine racemase signature 583 595 3.4E-39 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 PRINTS PR00992 Alanine racemase signature 661 688 3.4E-39 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 PRINTS PR00992 Alanine racemase signature 803 816 3.4E-39 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 Gene3D G3DSA:2.40.37.10 680 822 4.6E-54 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 SUPERFAMILY SSF53244 319 456 1.1E-17 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 Pfam PF08245 Mur ligase middle domain 113 269 9.2E-24 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 Gene3D G3DSA:3.20.20.10 469 679 6.3E-57 T 22-04-2016 IPR029066 PLP-binding barrel PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 SUPERFAMILY SSF51419 467 696 6.02E-52 T 22-04-2016 IPR029066 PLP-binding barrel PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 Pfam PF01225 Mur ligase family, catalytic domain 24 102 8.5E-8 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 Pfam PF00842 Alanine racemase, C-terminal domain 697 820 1.8E-40 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 PANTHER PTHR30511:SF0 458 823 2.3E-112 T 22-04-2016 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 Gene3D G3DSA:3.40.1190.10 97 301 3.1E-38 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 SUPERFAMILY SSF63418 18 103 1.96E-8 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 Gene3D G3DSA:3.40.1390.10 15 96 1.7E-8 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 SUPERFAMILY SSF53623 107 307 1.06E-32 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 Pfam PF01168 Alanine racemase, N-terminal domain 467 687 4.7E-49 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 SMART SM01005 697 821 2.0E-62 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 SUPERFAMILY SSF50621 693 822 9.42E-45 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 TIGRFAM TIGR00492 alr: alanine racemase 463 821 2.0E-85 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 Hamap MF_01201 Alanine racemase. 460 821 29.671 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS03650 bbd6cd1d8a5f88a46ef5b4a1bad7eccd 823 PANTHER PTHR30511 458 823 2.3E-112 T 22-04-2016 PGJ_RS07275 a4816398cd59eb39ad485bc5d88c4352 302 PANTHER PTHR22911:SF37 3 291 3.6E-47 T 22-04-2016 PGJ_RS07275 a4816398cd59eb39ad485bc5d88c4352 302 SUPERFAMILY SSF103481 190 291 1.7E-11 T 22-04-2016 PGJ_RS07275 a4816398cd59eb39ad485bc5d88c4352 302 SUPERFAMILY SSF103481 42 140 4.18E-11 T 22-04-2016 PGJ_RS07275 a4816398cd59eb39ad485bc5d88c4352 302 PANTHER PTHR22911 3 291 3.6E-47 T 22-04-2016 PGJ_RS07275 a4816398cd59eb39ad485bc5d88c4352 302 Pfam PF00892 EamA-like transporter family 152 289 6.8E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PGJ_RS07275 a4816398cd59eb39ad485bc5d88c4352 302 Pfam PF00892 EamA-like transporter family 8 139 4.1E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PGJ_RS01890 02b21f307433e3125071151e515bddef 690 Pfam PF07698 7TM receptor with intracellular HD hydrolase 255 441 1.0E-30 T 22-04-2016 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain PGJ_RS01890 02b21f307433e3125071151e515bddef 690 Pfam PF07697 7TM-HD extracellular 44 239 4.5E-10 T 22-04-2016 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain PGJ_RS01890 02b21f307433e3125071151e515bddef 690 TIGRFAM TIGR00277 HDIG: HDIG domain 464 560 3.5E-25 T 22-04-2016 IPR006675 HDIG domain PGJ_RS01890 02b21f307433e3125071151e515bddef 690 PANTHER PTHR36442 57 684 9.9E-113 T 22-04-2016 PGJ_RS01890 02b21f307433e3125071151e515bddef 690 SUPERFAMILY SSF109604 451 668 1.1E-20 T 22-04-2016 PGJ_RS01890 02b21f307433e3125071151e515bddef 690 SMART SM00471 462 618 7.2E-10 T 22-04-2016 IPR003607 HD/PDEase domain PGJ_RS01890 02b21f307433e3125071151e515bddef 690 Pfam PF01966 HD domain 466 608 2.7E-18 T 22-04-2016 IPR006674 HD domain PGJ_RS01890 02b21f307433e3125071151e515bddef 690 Gene3D G3DSA:1.10.3210.10 457 628 1.5E-27 T 22-04-2016 IPR006674 HD domain PGJ_RS05380 ce3ed65dd4dd0bd001007dea0cd27dce 178 SUPERFAMILY SSF52540 11 176 1.27E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05380 ce3ed65dd4dd0bd001007dea0cd27dce 178 PIRSF PIRSF006135 10 178 6.1E-56 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 PGJ_RS05380 ce3ed65dd4dd0bd001007dea0cd27dce 178 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 12 174 9.2E-53 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 PGJ_RS05380 ce3ed65dd4dd0bd001007dea0cd27dce 178 Gene3D G3DSA:3.40.50.300 11 176 1.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05380 ce3ed65dd4dd0bd001007dea0cd27dce 178 PANTHER PTHR34848 1 178 5.1E-57 T 22-04-2016 PGJ_RS01390 27855887806eed9ead57d5dc727084ab 87 Pfam PF00403 Heavy-metal-associated domain 23 84 6.3E-15 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PGJ_RS01390 27855887806eed9ead57d5dc727084ab 87 SUPERFAMILY SSF55008 18 86 1.83E-19 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PGJ_RS01390 27855887806eed9ead57d5dc727084ab 87 Gene3D G3DSA:3.30.70.100 18 87 2.2E-22 T 22-04-2016 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 SUPERFAMILY SSF53067 4 182 4.75E-63 T 22-04-2016 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 Gene3D G3DSA:2.60.34.10 384 525 9.4E-69 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 597 1.3E-294 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 SUPERFAMILY SSF53067 186 376 3.05E-65 T 22-04-2016 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 PANTHER PTHR19375 2 640 0.0 T 22-04-2016 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 Gene3D G3DSA:3.90.640.10 224 308 1.9E-30 T 22-04-2016 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 PANTHER PTHR19375:SF173 2 640 0.0 T 22-04-2016 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 Gene3D G3DSA:3.30.420.40 313 355 4.2E-36 T 22-04-2016 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 Gene3D G3DSA:3.30.420.40 190 223 4.2E-36 T 22-04-2016 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 639 37.161 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 SUPERFAMILY SSF100920 378 534 1.15E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 Gene3D G3DSA:3.30.420.40 117 189 9.9E-62 T 22-04-2016 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 Gene3D G3DSA:3.30.420.40 4 52 9.9E-62 T 22-04-2016 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 PRINTS PR00301 70kDa heat shock protein signature 196 206 9.6E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 PRINTS PR00301 70kDa heat shock protein signature 328 344 9.6E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 PRINTS PR00301 70kDa heat shock protein signature 136 156 9.6E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 PRINTS PR00301 70kDa heat shock protein signature 54 62 9.6E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 PRINTS PR00301 70kDa heat shock protein signature 463 479 9.6E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 PRINTS PR00301 70kDa heat shock protein signature 31 43 9.6E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 PRINTS PR00301 70kDa heat shock protein signature 3 16 9.6E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 PRINTS PR00301 70kDa heat shock protein signature 382 401 9.6E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 PRINTS PR00301 70kDa heat shock protein signature 359 379 9.6E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 Gene3D G3DSA:1.20.1270.10 526 597 5.4E-24 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 Gene3D G3DSA:3.30.30.30 53 104 2.0E-19 T 22-04-2016 PGJ_RS03320 0962868f51b1938d56f8be41ead9e2c6 640 Pfam PF00012 Hsp70 protein 4 597 2.4E-258 T 22-04-2016 IPR013126 Heat shock protein 70 family PGJ_RS05955 7168221a4ec6d4ff0181aa9b4795067a 251 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 9 245 5.1E-109 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 PGJ_RS05955 7168221a4ec6d4ff0181aa9b4795067a 251 SUPERFAMILY SSF52540 7 239 7.22E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05955 7168221a4ec6d4ff0181aa9b4795067a 251 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS05955 7168221a4ec6d4ff0181aa9b4795067a 251 Gene3D G3DSA:3.40.50.300 3 236 3.1E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05955 7168221a4ec6d4ff0181aa9b4795067a 251 Pfam PF00005 ABC transporter 25 170 1.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS05955 7168221a4ec6d4ff0181aa9b4795067a 251 PANTHER PTHR24220:SF497 10 242 1.7E-136 T 22-04-2016 PGJ_RS05955 7168221a4ec6d4ff0181aa9b4795067a 251 PANTHER PTHR24220 10 242 1.7E-136 T 22-04-2016 PGJ_RS05955 7168221a4ec6d4ff0181aa9b4795067a 251 SMART SM00382 33 206 2.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 Gene3D G3DSA:3.30.1840.10 100 292 8.3E-53 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 PANTHER PTHR30218:SF0 2 673 3.4E-249 T 22-04-2016 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 Gene3D G3DSA:3.30.870.10 493 676 3.0E-65 T 22-04-2016 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 PIRSF PIRSF015589 1 683 3.6E-242 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 PANTHER PTHR30218 2 673 3.4E-249 T 22-04-2016 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 SUPERFAMILY SSF140356 1 99 7.46E-27 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 SUPERFAMILY SSF56024 494 674 2.69E-64 T 22-04-2016 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 Pfam PF02503 Polyphosphate kinase middle domain 113 305 2.6E-46 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 Pfam PF13090 Polyphosphate kinase C-terminal domain 323 669 1.6E-130 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 Gene3D G3DSA:3.30.870.10 310 492 1.6E-51 T 22-04-2016 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 1 670 2.4E-202 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 SUPERFAMILY SSF56024 309 491 5.83E-46 T 22-04-2016 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 Pfam PF13089 Polyphosphate kinase N-terminal domain 1 103 2.3E-28 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 PGJ_RS08155 d6e5530f85faee7cf8180150d5198d79 683 SUPERFAMILY SSF143724 101 303 8.24E-51 T 22-04-2016 PGJ_RS02410 5331123685ede83224054bdfef740f31 249 Gene3D G3DSA:1.10.3720.10 49 243 1.4E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PGJ_RS02410 5331123685ede83224054bdfef740f31 249 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 243 3.5E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PGJ_RS02410 5331123685ede83224054bdfef740f31 249 SUPERFAMILY SSF161098 54 231 4.06E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PGJ_RS02410 5331123685ede83224054bdfef740f31 249 PANTHER PTHR30151 10 247 3.8E-40 T 22-04-2016 PGJ_RS09645 bd586ef35d71031e87f8aabf98d38c7d 445 TIGRFAM TIGR03173 pbuX: xanthine permease 31 442 3.6E-138 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 PGJ_RS09645 bd586ef35d71031e87f8aabf98d38c7d 445 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 359 379 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PGJ_RS09645 bd586ef35d71031e87f8aabf98d38c7d 445 PANTHER PTHR11119 3 443 5.6E-218 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PGJ_RS09645 bd586ef35d71031e87f8aabf98d38c7d 445 Pfam PF00860 Permease family 27 410 1.6E-91 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PGJ_RS09645 bd586ef35d71031e87f8aabf98d38c7d 445 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 23 437 1.8E-113 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PGJ_RS09645 bd586ef35d71031e87f8aabf98d38c7d 445 PANTHER PTHR11119:SF44 3 443 5.6E-218 T 22-04-2016 PGJ_RS04190 d16c22a0f0c6f3a7ecf6ef718589f90d 123 PANTHER PTHR38445:SF2 1 106 2.0E-23 T 22-04-2016 PGJ_RS04190 d16c22a0f0c6f3a7ecf6ef718589f90d 123 SUPERFAMILY SSF46785 2 86 5.14E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS04190 d16c22a0f0c6f3a7ecf6ef718589f90d 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 5.5E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PGJ_RS04190 d16c22a0f0c6f3a7ecf6ef718589f90d 123 Gene3D G3DSA:1.10.10.10 7 74 2.8E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS04190 d16c22a0f0c6f3a7ecf6ef718589f90d 123 SMART SM00345 14 73 1.3E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PGJ_RS04190 d16c22a0f0c6f3a7ecf6ef718589f90d 123 PANTHER PTHR38445 1 106 2.0E-23 T 22-04-2016 PGJ_RS03530 eadf2618e912576c5a60a39ce160f130 416 Pfam PF12544 Lysine-2,3-aminomutase 313 412 7.8E-40 T 22-04-2016 IPR025895 Lysine-2,3-aminomutase, C-terminal domain PGJ_RS03530 eadf2618e912576c5a60a39ce160f130 416 TIGRFAM TIGR00238 TIGR00238: KamA family protein 10 334 5.5E-125 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase PGJ_RS03530 eadf2618e912576c5a60a39ce160f130 416 Gene3D G3DSA:3.20.20.70 105 341 4.3E-24 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS03530 eadf2618e912576c5a60a39ce160f130 416 PANTHER PTHR30538:SF1 3 412 1.1E-182 T 22-04-2016 PGJ_RS03530 eadf2618e912576c5a60a39ce160f130 416 Pfam PF04055 Radical SAM superfamily 122 270 9.4E-12 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS03530 eadf2618e912576c5a60a39ce160f130 416 SUPERFAMILY SSF102114 106 352 3.27E-38 T 22-04-2016 PGJ_RS03530 eadf2618e912576c5a60a39ce160f130 416 Pfam PF13353 4Fe-4S single cluster domain 119 192 7.5E-5 T 22-04-2016 PGJ_RS03530 eadf2618e912576c5a60a39ce160f130 416 PIRSF PIRSF004911 1 397 1.1E-170 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase PGJ_RS03530 eadf2618e912576c5a60a39ce160f130 416 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 13 386 2.9E-189 T 22-04-2016 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 PGJ_RS03530 eadf2618e912576c5a60a39ce160f130 416 PANTHER PTHR30538 3 412 1.1E-182 T 22-04-2016 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 Gene3D G3DSA:1.10.8.60 783 861 9.8E-23 T 22-04-2016 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 Gene3D G3DSA:3.40.50.300 754 782 2.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 Gene3D G3DSA:3.40.50.300 549 721 2.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 SUPERFAMILY SSF81923 4 154 3.24E-37 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 SMART SM00382 196 341 1.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 SMART SM00382 595 738 3.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 PANTHER PTHR11638:SF18 1 863 0.0 T 22-04-2016 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 92 142 3.0E-8 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.6E-7 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 860 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 Gene3D G3DSA:3.40.50.300 157 340 2.3E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 1.9E-41 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 1.9E-41 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 1.9E-41 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 1.9E-41 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 Gene3D G3DSA:1.10.8.60 344 426 1.7E-36 T 22-04-2016 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 PANTHER PTHR11638 1 863 0.0 T 22-04-2016 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 Gene3D G3DSA:1.10.1780.10 1 145 3.6E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 764 3.0E-52 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 SMART SM01086 771 860 4.9E-29 T 22-04-2016 IPR019489 Clp ATPase, C-terminal PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 334 4.7E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 SUPERFAMILY SSF52540 157 543 3.26E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 771 846 2.1E-19 T 22-04-2016 IPR019489 Clp ATPase, C-terminal PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 292 304 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PGJ_RS03730 456e9aedd7522973497810ebf5ffc263 863 SUPERFAMILY SSF52540 544 860 3.9E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06480 656fd6bb33d1e74405402791a386ff3c 282 Gene3D G3DSA:3.20.20.70 22 280 5.8E-58 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS06480 656fd6bb33d1e74405402791a386ff3c 282 PIRSF PIRSF005963 1 282 4.7E-124 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PGJ_RS06480 656fd6bb33d1e74405402791a386ff3c 282 SMART SM00729 53 259 1.4E-11 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PGJ_RS06480 656fd6bb33d1e74405402791a386ff3c 282 TIGRFAM TIGR00510 lipA: lipoyl synthase 4 279 3.9E-100 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PGJ_RS06480 656fd6bb33d1e74405402791a386ff3c 282 Pfam PF04055 Radical SAM superfamily 62 218 1.2E-12 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS06480 656fd6bb33d1e74405402791a386ff3c 282 SUPERFAMILY SSF102114 18 279 3.66E-56 T 22-04-2016 PGJ_RS06480 656fd6bb33d1e74405402791a386ff3c 282 PANTHER PTHR10949 5 278 1.1E-137 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PGJ_RS06480 656fd6bb33d1e74405402791a386ff3c 282 Hamap MF_00206 Lipoyl synthase [lipA]. 1 282 131.253 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 SUPERFAMILY SSF56712 1 480 1.57E-180 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 SUPERFAMILY SSF56712 513 578 1.57E-180 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Pfam PF01751 Toprim domain 4 112 5.2E-27 T 22-04-2016 IPR006171 Toprim domain PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 PANTHER PTHR11390 1 482 2.6E-258 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 PANTHER PTHR11390 513 611 2.6E-258 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 350 366 1.7E-34 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 458 472 1.7E-34 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 76 89 1.7E-34 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 161 179 1.7E-34 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 278 287 1.7E-34 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 PANTHER PTHR11390:SF27 1 482 2.6E-258 T 22-04-2016 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 PANTHER PTHR11390:SF27 513 611 2.6E-258 T 22-04-2016 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Gene3D G3DSA:1.10.460.10 513 578 2.4E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Gene3D G3DSA:1.10.460.10 132 185 2.4E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Gene3D G3DSA:1.10.460.10 435 480 2.4E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Pfam PF01131 DNA topoisomerase 127 481 3.3E-109 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Pfam PF01131 DNA topoisomerase 503 562 1.1E-8 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 SMART SM00437 236 502 1.4E-91 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Gene3D G3DSA:2.70.20.10 303 434 5.8E-30 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Gene3D G3DSA:2.70.20.10 211 296 3.5E-21 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 SMART SM00436 103 191 4.7E-49 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 SMART SM00493 2 102 4.6E-27 T 22-04-2016 IPR006171 Toprim domain PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Pfam PF13368 Topoisomerase C-terminal repeat 719 768 1.4E-12 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Pfam PF13368 Topoisomerase C-terminal repeat 661 709 1.7E-13 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Pfam PF13368 Topoisomerase C-terminal repeat 595 656 1.9E-13 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 273 287 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Gene3D G3DSA:3.40.50.140 1 131 1.6E-44 T 22-04-2016 IPR006171 Toprim domain PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 481 8.6E-181 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 PGJ_RS05160 5ea1f6869bbf4de8fb271fe5c8a72305 788 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 682 48.663 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 Gene3D G3DSA:1.10.150.20 709 814 4.5E-35 T 22-04-2016 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 Gene3D G3DSA:3.30.420.10 332 538 2.1E-65 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 SMART SM00474 334 514 2.9E-26 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 Gene3D G3DSA:1.10.150.20 188 248 2.9E-27 T 22-04-2016 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 ProSitePatterns PS00447 DNA polymerase family A signature. 751 770 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 SMART SM00482 682 889 1.7E-108 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 171 2.7E-48 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 SUPERFAMILY SSF47807 175 287 2.24E-32 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 TIGRFAM TIGR00593 pola: DNA polymerase I 5 926 7.3E-290 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 SUPERFAMILY SSF56672 518 926 1.45E-150 T 22-04-2016 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 Gene3D G3DSA:1.20.1060.10 540 659 7.0E-39 T 22-04-2016 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 Gene3D G3DSA:3.40.50.1010 4 187 2.1E-59 T 22-04-2016 IPR029060 PIN domain-like PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 Pfam PF01612 3'-5' exonuclease 334 513 3.0E-31 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 Pfam PF00476 DNA polymerase family A 546 923 1.2E-149 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PANTHER PTHR10133 320 925 0.0 T 22-04-2016 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PANTHER PTHR10133 1 283 0.0 T 22-04-2016 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 SUPERFAMILY SSF53098 333 537 1.35E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 175 266 1.4E-29 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 Gene3D G3DSA:3.30.70.370 660 708 3.4E-63 T 22-04-2016 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 Gene3D G3DSA:3.30.70.370 815 926 3.4E-63 T 22-04-2016 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 751 776 3.1E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 842 858 3.1E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 697 720 3.1E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 674 689 3.1E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 872 885 3.1E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 810 821 3.1E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 788 799 3.1E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 727 740 3.1E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 651 673 3.1E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 SUPERFAMILY SSF88723 2 171 4.58E-48 T 22-04-2016 IPR029060 PIN domain-like PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PANTHER PTHR10133:SF27 320 925 0.0 T 22-04-2016 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 PANTHER PTHR10133:SF27 1 283 0.0 T 22-04-2016 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 SMART SM00475 3 263 1.9E-114 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 PGJ_RS07780 ce164dc01bffdf52c8d3caf0c70ee88a 926 SMART SM00279 175 210 3.2E-13 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 PGJ_RS01350 f5346c8290316c203a78cfc3c1152f9f 616 SUPERFAMILY SSF90123 9 45 9.16E-65 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PGJ_RS01350 f5346c8290316c203a78cfc3c1152f9f 616 SUPERFAMILY SSF90123 89 364 9.16E-65 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PGJ_RS01350 f5346c8290316c203a78cfc3c1152f9f 616 Pfam PF00005 ABC transporter 395 544 2.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS01350 f5346c8290316c203a78cfc3c1152f9f 616 ProSitePatterns PS00211 ABC transporters family signature. 516 530 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS01350 f5346c8290316c203a78cfc3c1152f9f 616 PANTHER PTHR24221 5 56 3.9E-208 T 22-04-2016 PGJ_RS01350 f5346c8290316c203a78cfc3c1152f9f 616 PANTHER PTHR24221 98 610 3.9E-208 T 22-04-2016 PGJ_RS01350 f5346c8290316c203a78cfc3c1152f9f 616 SUPERFAMILY SSF52540 369 613 2.83E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01350 f5346c8290316c203a78cfc3c1152f9f 616 Gene3D G3DSA:3.40.50.300 380 607 9.5E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01350 f5346c8290316c203a78cfc3c1152f9f 616 SMART SM00382 404 592 2.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS01350 f5346c8290316c203a78cfc3c1152f9f 616 Pfam PF00664 ABC transporter transmembrane region 84 334 2.0E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PGJ_RS01350 f5346c8290316c203a78cfc3c1152f9f 616 Gene3D G3DSA:1.20.1560.10 8 57 2.8E-70 T 22-04-2016 PGJ_RS01350 f5346c8290316c203a78cfc3c1152f9f 616 Gene3D G3DSA:1.20.1560.10 94 367 2.8E-70 T 22-04-2016 PGJ_RS01735 6cbbe569322b89f9feda1415054d4c0a 261 PANTHER PTHR30522:SF0 3 261 1.3E-104 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG PGJ_RS01735 6cbbe569322b89f9feda1415054d4c0a 261 PANTHER PTHR30522 3 261 1.3E-104 T 22-04-2016 PGJ_RS01735 6cbbe569322b89f9feda1415054d4c0a 261 Gene3D G3DSA:1.10.287.1080 7 76 7.8E-9 T 22-04-2016 PGJ_RS01735 6cbbe569322b89f9feda1415054d4c0a 261 Gene3D G3DSA:1.10.287.1080 133 221 4.2E-13 T 22-04-2016 PGJ_RS01735 6cbbe569322b89f9feda1415054d4c0a 261 SUPERFAMILY SSF101386 137 237 4.74E-26 T 22-04-2016 PGJ_RS01735 6cbbe569322b89f9feda1415054d4c0a 261 SUPERFAMILY SSF101386 11 108 2.62E-19 T 22-04-2016 PGJ_RS01735 6cbbe569322b89f9feda1415054d4c0a 261 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 31 103 2.8E-22 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PGJ_RS01735 6cbbe569322b89f9feda1415054d4c0a 261 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 166 226 4.9E-10 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PGJ_RS01735 6cbbe569322b89f9feda1415054d4c0a 261 TIGRFAM TIGR00444 mazG: MazG family protein 21 257 4.5E-84 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG PGJ_RS04360 0b244dd0f960d1d4d3481973badb103f 236 PANTHER PTHR15362 1 143 1.2E-25 T 22-04-2016 PGJ_RS04360 0b244dd0f960d1d4d3481973badb103f 236 PANTHER PTHR15362:SF2 1 143 1.2E-25 T 22-04-2016 PGJ_RS04360 0b244dd0f960d1d4d3481973badb103f 236 Pfam PF01066 CDP-alcohol phosphatidyltransferase 7 71 7.3E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PGJ_RS04360 0b244dd0f960d1d4d3481973badb103f 236 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PGJ_RS04360 0b244dd0f960d1d4d3481973badb103f 236 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 12 177 5.1E-32 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 Gene3D G3DSA:3.30.565.10 14 222 1.5E-91 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS01730 98b985307975b7c334fd44165133b812 654 Gene3D G3DSA:3.40.50.670 418 636 6.0E-94 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 14 650 2.9E-291 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PANTHER PTHR10169 1 651 1.3E-294 T 22-04-2016 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 Gene3D G3DSA:3.30.230.10 234 406 1.1E-71 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS01730 98b985307975b7c334fd44165133b812 654 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 41 181 3.5E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS01730 98b985307975b7c334fd44165133b812 654 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 11 654 86.984 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 SUPERFAMILY SSF56719 408 647 1.78E-89 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 ProSitePatterns PS00177 DNA topoisomerase II signature. 436 444 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 SUPERFAMILY SSF54211 235 405 3.98E-59 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS01730 98b985307975b7c334fd44165133b812 654 SMART SM00387 39 183 1.4E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS01730 98b985307975b7c334fd44165133b812 654 SUPERFAMILY SSF55874 14 219 2.23E-72 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS01730 98b985307975b7c334fd44165133b812 654 Pfam PF00204 DNA gyrase B 235 404 2.4E-60 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR01159 DNA gyrase subunit B signature 608 620 1.9E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR01159 DNA gyrase subunit B signature 624 640 1.9E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR01159 DNA gyrase subunit B signature 326 342 1.9E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR01159 DNA gyrase subunit B signature 484 493 1.9E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR01159 DNA gyrase subunit B signature 388 408 1.9E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR01159 DNA gyrase subunit B signature 374 388 1.9E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR01159 DNA gyrase subunit B signature 203 216 1.9E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR01159 DNA gyrase subunit B signature 188 203 1.9E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR01159 DNA gyrase subunit B signature 14 24 1.9E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR01159 DNA gyrase subunit B signature 234 256 1.9E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 Pfam PF01751 Toprim domain 433 545 4.5E-19 T 22-04-2016 IPR006171 Toprim domain PGJ_RS01730 98b985307975b7c334fd44165133b812 654 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 583 644 4.0E-30 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR00418 DNA topoisomerase II family signature 587 603 7.7E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR00418 DNA topoisomerase II family signature 523 540 7.7E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR00418 DNA topoisomerase II family signature 121 135 7.7E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR00418 DNA topoisomerase II family signature 434 448 7.7E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR00418 DNA topoisomerase II family signature 43 58 7.7E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR00418 DNA topoisomerase II family signature 78 91 7.7E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR00418 DNA topoisomerase II family signature 543 555 7.7E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR00418 DNA topoisomerase II family signature 505 521 7.7E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 PRINTS PR00418 DNA topoisomerase II family signature 282 295 7.7E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01730 98b985307975b7c334fd44165133b812 654 SMART SM00433 43 648 0.0 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 SUPERFAMILY SSF51735 3 168 1.74E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 Gene3D G3DSA:3.30.360.10 161 316 4.3E-84 T 22-04-2016 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 PIRSF PIRSF000149 1 336 1.9E-132 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 Gene3D G3DSA:3.40.50.720 1 160 9.4E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 PANTHER PTHR10836 1 334 7.2E-248 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 SUPERFAMILY SSF55347 151 314 1.5E-78 T 22-04-2016 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 8.5E-61 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 SMART SM00846 2 152 8.1E-98 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 326 3.6E-138 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.5E-45 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 1.5E-45 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.5E-45 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.5E-45 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.5E-45 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PGJ_RS09530 e55940a0e4cda8b67eae2ed1f4034e19 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 6.6E-69 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 PGJ_RS05815 b54f8916b08227e33716c0b20e9cff95 199 PANTHER PTHR11746 133 186 2.0E-14 T 22-04-2016 PGJ_RS05815 b54f8916b08227e33716c0b20e9cff95 199 SUPERFAMILY SSF52972 6 194 1.44E-57 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PGJ_RS05815 b54f8916b08227e33716c0b20e9cff95 199 Gene3D G3DSA:3.90.950.10 7 196 3.3E-62 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PGJ_RS05815 b54f8916b08227e33716c0b20e9cff95 199 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 193 3.8E-44 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 PGJ_RS05815 b54f8916b08227e33716c0b20e9cff95 199 Hamap MF_00528 Septum formation protein Maf [maf]. 9 199 28.345 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 PGJ_RS05815 b54f8916b08227e33716c0b20e9cff95 199 PIRSF PIRSF006305 1 199 4.7E-66 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 PGJ_RS05815 b54f8916b08227e33716c0b20e9cff95 199 Pfam PF02545 Maf-like protein 9 194 6.5E-54 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 PGJ_RS05815 b54f8916b08227e33716c0b20e9cff95 199 PANTHER PTHR11746:SF80 133 186 2.0E-14 T 22-04-2016 PGJ_RS02320 503753039b35a05a3248141e1cde0eca 381 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 122 371 5.9E-24 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PGJ_RS02320 503753039b35a05a3248141e1cde0eca 381 SUPERFAMILY SSF56219 281 381 6.41E-41 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PGJ_RS02320 503753039b35a05a3248141e1cde0eca 381 SUPERFAMILY SSF56219 113 250 6.41E-41 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PGJ_RS02320 503753039b35a05a3248141e1cde0eca 381 Gene3D G3DSA:3.60.10.10 109 378 7.6E-27 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PGJ_RS01300 78f58d7f91feca317dec894e5cc2fe46 163 PANTHER PTHR11079:SF25 8 163 4.2E-54 T 22-04-2016 PGJ_RS01300 78f58d7f91feca317dec894e5cc2fe46 163 Gene3D G3DSA:3.40.140.10 3 156 4.2E-57 T 22-04-2016 PGJ_RS01300 78f58d7f91feca317dec894e5cc2fe46 163 PANTHER PTHR11079 8 163 4.2E-54 T 22-04-2016 PGJ_RS01300 78f58d7f91feca317dec894e5cc2fe46 163 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 108 2.6E-26 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 PGJ_RS01300 78f58d7f91feca317dec894e5cc2fe46 163 SUPERFAMILY SSF53927 4 159 3.01E-51 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PGJ_RS06905 b0d1cb8e9f3815e607bdb66dd2e6fc3e 273 Pfam PF13306 Leucine rich repeats (6 copies) 12 135 1.1E-35 T 22-04-2016 IPR026906 Leucine rich repeat 5 PGJ_RS06905 b0d1cb8e9f3815e607bdb66dd2e6fc3e 273 Gene3D G3DSA:3.80.10.10 33 105 7.9E-5 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PGJ_RS06905 b0d1cb8e9f3815e607bdb66dd2e6fc3e 273 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 205 264 3.2E-9 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS06905 b0d1cb8e9f3815e607bdb66dd2e6fc3e 273 PANTHER PTHR11017 10 141 1.0E-37 T 22-04-2016 PGJ_RS06905 b0d1cb8e9f3815e607bdb66dd2e6fc3e 273 SUPERFAMILY SSF52058 10 136 1.09E-13 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PGJ_RS01690 689a40efb071195d5b348d81e67986a0 200 PANTHER PTHR17490 1 196 7.4E-47 T 22-04-2016 PGJ_RS01690 689a40efb071195d5b348d81e67986a0 200 SUPERFAMILY SSF55821 2 197 6.41E-43 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PGJ_RS01690 689a40efb071195d5b348d81e67986a0 200 Pfam PF01300 Telomere recombination 21 196 6.1E-39 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 PGJ_RS01690 689a40efb071195d5b348d81e67986a0 200 PANTHER PTHR17490:SF7 1 196 7.4E-47 T 22-04-2016 PGJ_RS01690 689a40efb071195d5b348d81e67986a0 200 Gene3D G3DSA:3.90.870.10 2 197 2.1E-47 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PGJ_RS01690 689a40efb071195d5b348d81e67986a0 200 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 197 6.6E-43 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 PGJ_RS04385 50fd7752ad00d60c7cab56b16c0c0c32 372 SUPERFAMILY SSF52540 104 356 8.52E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04385 50fd7752ad00d60c7cab56b16c0c0c32 372 Gene3D G3DSA:3.40.50.300 95 349 6.2E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04385 50fd7752ad00d60c7cab56b16c0c0c32 372 PANTHER PTHR23264 1 359 7.1E-137 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein PGJ_RS04385 50fd7752ad00d60c7cab56b16c0c0c32 372 Pfam PF01883 Domain of unknown function DUF59 11 78 1.5E-12 T 22-04-2016 IPR002744 Domain of unknown function DUF59 PGJ_RS04385 50fd7752ad00d60c7cab56b16c0c0c32 372 PANTHER PTHR23264:SF19 1 359 7.1E-137 T 22-04-2016 PGJ_RS04385 50fd7752ad00d60c7cab56b16c0c0c32 372 SUPERFAMILY SSF117916 6 72 5.89E-10 T 22-04-2016 PGJ_RS04385 50fd7752ad00d60c7cab56b16c0c0c32 372 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 102 350 1.3E-91 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein PGJ_RS04385 50fd7752ad00d60c7cab56b16c0c0c32 372 Hamap MF_02040 Iron-sulfur cluster carrier protein. 97 351 34.409 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein PGJ_RS03775 c14a7d9c973152e944a52c28b1bb4ea7 460 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 1 453 17.276 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PGJ_RS03775 c14a7d9c973152e944a52c28b1bb4ea7 460 PANTHER PTHR30008:SF0 1 454 1.8E-98 T 22-04-2016 PGJ_RS03775 c14a7d9c973152e944a52c28b1bb4ea7 460 PANTHER PTHR30008 1 454 1.8E-98 T 22-04-2016 PGJ_RS03775 c14a7d9c973152e944a52c28b1bb4ea7 460 Pfam PF13742 OB-fold nucleic acid binding domain 4 111 2.8E-17 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 PGJ_RS03775 c14a7d9c973152e944a52c28b1bb4ea7 460 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 5 452 2.6E-90 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PGJ_RS03775 c14a7d9c973152e944a52c28b1bb4ea7 460 Pfam PF02601 Exonuclease VII, large subunit 137 450 6.7E-69 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 586 760 3.5E-53 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 Gene3D G3DSA:1.10.8.60 777 856 5.7E-27 T 22-04-2016 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 PANTHER PTHR11638:SF18 193 858 0.0 T 22-04-2016 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 PANTHER PTHR11638:SF18 5 142 0.0 T 22-04-2016 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 PANTHER PTHR11638 193 858 0.0 T 22-04-2016 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 PANTHER PTHR11638 5 142 0.0 T 22-04-2016 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 138 0.012 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 19 64 0.033 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 255 383 4.9E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 Gene3D G3DSA:3.40.50.300 749 776 4.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 Gene3D G3DSA:3.40.50.300 548 713 4.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 698 712 3.2E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 636 654 3.2E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 591 609 3.2E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 665 683 3.2E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 621 639 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 Gene3D G3DSA:1.10.8.60 395 476 2.5E-30 T 22-04-2016 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 SUPERFAMILY SSF52540 211 515 6.93E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 SMART SM00382 250 390 3.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 SMART SM00382 587 767 3.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 5.4E-22 T 22-04-2016 IPR019489 Clp ATPase, C-terminal PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 SUPERFAMILY SSF81923 4 138 2.49E-13 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 Gene3D G3DSA:1.10.1780.10 3 139 2.6E-18 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 Gene3D G3DSA:3.40.50.300 213 391 6.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 Pfam PF02151 UvrB/uvrC motif 468 498 4.3E-5 T 22-04-2016 IPR001943 UVR domain GO:0005515 PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 SUPERFAMILY SSF52540 536 851 1.26E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00045 1c54f1df1c6a22f631b55e1472071ba6 859 SMART SM01086 766 855 3.1E-29 T 22-04-2016 IPR019489 Clp ATPase, C-terminal PGJ_RS05880 d1974f76cdbf52d7fbd117e53b8160dc 706 Gene3D G3DSA:2.170.130.10 32 152 4.8E-34 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS05880 d1974f76cdbf52d7fbd117e53b8160dc 706 Gene3D G3DSA:2.40.170.20 153 706 8.1E-75 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS05880 d1974f76cdbf52d7fbd117e53b8160dc 706 PANTHER PTHR32552 4 207 2.3E-42 T 22-04-2016 PGJ_RS05880 d1974f76cdbf52d7fbd117e53b8160dc 706 PANTHER PTHR32552 233 706 2.3E-42 T 22-04-2016 PGJ_RS05880 d1974f76cdbf52d7fbd117e53b8160dc 706 SUPERFAMILY SSF56935 36 706 6.11E-99 T 22-04-2016 PGJ_RS05880 d1974f76cdbf52d7fbd117e53b8160dc 706 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 149 2.6E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS05880 d1974f76cdbf52d7fbd117e53b8160dc 706 Pfam PF00593 TonB dependent receptor 434 702 2.3E-30 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS05880 d1974f76cdbf52d7fbd117e53b8160dc 706 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 34 706 5.7E-176 T 22-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 PGJ_RS05880 d1974f76cdbf52d7fbd117e53b8160dc 706 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 35 706 2.7E-137 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 PGJ_RS03095 79e7c6599ac720822862a5b4025740e8 521 Pfam PF01464 Transglycosylase SLT domain 362 463 3.5E-17 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 PGJ_RS03095 79e7c6599ac720822862a5b4025740e8 521 Gene3D G3DSA:1.10.530.10 496 519 7.2E-38 T 22-04-2016 PGJ_RS03095 79e7c6599ac720822862a5b4025740e8 521 Gene3D G3DSA:1.10.530.10 332 458 7.2E-38 T 22-04-2016 PGJ_RS03095 79e7c6599ac720822862a5b4025740e8 521 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 107 319 2.0E-25 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PGJ_RS03095 79e7c6599ac720822862a5b4025740e8 521 SMART SM00062 94 321 4.7E-23 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PGJ_RS03095 79e7c6599ac720822862a5b4025740e8 521 SUPERFAMILY SSF53955 499 520 3.38E-31 T 22-04-2016 IPR023346 Lysozyme-like domain PGJ_RS03095 79e7c6599ac720822862a5b4025740e8 521 SUPERFAMILY SSF53955 345 461 3.38E-31 T 22-04-2016 IPR023346 Lysozyme-like domain PGJ_RS03095 79e7c6599ac720822862a5b4025740e8 521 PANTHER PTHR21666 331 514 3.9E-28 T 22-04-2016 PGJ_RS03095 79e7c6599ac720822862a5b4025740e8 521 Gene3D G3DSA:3.40.190.10 92 179 1.0E-12 T 22-04-2016 PGJ_RS03095 79e7c6599ac720822862a5b4025740e8 521 Gene3D G3DSA:3.40.190.10 280 319 1.0E-12 T 22-04-2016 PGJ_RS03095 79e7c6599ac720822862a5b4025740e8 521 Gene3D G3DSA:3.40.190.10 180 274 3.9E-7 T 22-04-2016 PGJ_RS03095 79e7c6599ac720822862a5b4025740e8 521 SUPERFAMILY SSF53850 95 320 3.17E-33 T 22-04-2016 PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 SUPERFAMILY SSF82697 11 106 1.52E-17 T 22-04-2016 PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 SMART SM01211 981 1227 1.5E-112 T 22-04-2016 PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 PANTHER PTHR10099:SF1 12 1230 0.0 T 22-04-2016 PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 Gene3D G3DSA:3.40.50.880 982 1194 1.5E-13 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1228 18.988 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 PANTHER PTHR10099 12 1230 0.0 T 22-04-2016 PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 SUPERFAMILY SSF52317 981 1227 6.23E-82 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 SUPERFAMILY SSF55326 565 758 1.57E-53 T 22-04-2016 PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 SUPERFAMILY SSF56042 768 935 2.39E-35 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 12 1227 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 SUPERFAMILY SSF109736 119 171 3.53E-12 T 22-04-2016 PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 983 1227 4.5E-81 T 22-04-2016 PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 Gene3D G3DSA:3.30.1330.10 593 751 1.7E-10 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 Gene3D G3DSA:3.30.1330.10 162 372 1.3E-32 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 Pfam PF02769 AIR synthase related protein, C-terminal domain 383 533 2.6E-20 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 Pfam PF02769 AIR synthase related protein, C-terminal domain 782 890 7.8E-10 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 SUPERFAMILY SSF55326 172 378 4.53E-41 T 22-04-2016 PGJ_RS07440 1c76a7696f6ba81dfe08018f9ce800c8 1234 SUPERFAMILY SSF56042 381 601 8.22E-42 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 Pfam PF02780 Transketolase, C-terminal domain 505 622 2.2E-22 T 22-04-2016 IPR033248 Transketolase, C-terminal domain PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 SUPERFAMILY SSF52518 7 355 5.5E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 Gene3D G3DSA:3.40.50.920 503 625 7.2E-33 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 PANTHER PTHR11624:SF20 23 217 4.8E-263 T 22-04-2016 PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 PANTHER PTHR11624:SF20 245 631 4.8E-263 T 22-04-2016 PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 SMART SM00861 325 490 7.5E-55 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 SUPERFAMILY SSF52518 320 486 1.73E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 Pfam PF02779 Transketolase, pyrimidine binding domain 326 485 6.7E-32 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 632 41.222 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 Gene3D G3DSA:3.40.50.970 6 194 4.9E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 Gene3D G3DSA:3.40.50.970 243 302 4.9E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 Gene3D G3DSA:3.40.50.970 303 488 8.6E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 SUPERFAMILY SSF52922 498 630 9.03E-29 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 ProSitePatterns PS00802 Transketolase signature 2. 431 447 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 PANTHER PTHR11624 23 217 4.8E-263 T 22-04-2016 IPR033247 Transketolase family PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 PANTHER PTHR11624 245 631 4.8E-263 T 22-04-2016 IPR033247 Transketolase family PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 623 7.6E-222 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PGJ_RS09975 91afc825ca5271c27d51ced24ef1c3fd 634 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 11 286 4.3E-111 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PGJ_RS01905 41d6112ab4da549fb0057723c4231269 255 Gene3D G3DSA:3.40.1700.10 116 244 1.2E-43 T 22-04-2016 PGJ_RS01905 41d6112ab4da549fb0057723c4231269 255 PANTHER PTHR34185:SF1 1 255 2.3E-65 T 22-04-2016 PGJ_RS01905 41d6112ab4da549fb0057723c4231269 255 PANTHER PTHR34185 1 255 2.3E-65 T 22-04-2016 PGJ_RS01905 41d6112ab4da549fb0057723c4231269 255 SUPERFAMILY SSF143597 40 243 3.14E-56 T 22-04-2016 PGJ_RS01905 41d6112ab4da549fb0057723c4231269 255 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 6 250 1.6E-56 T 22-04-2016 IPR014046 Diadenylate cyclase-like PGJ_RS01905 41d6112ab4da549fb0057723c4231269 255 PIRSF PIRSF004793 1 255 1.4E-68 T 22-04-2016 IPR014046 Diadenylate cyclase-like PGJ_RS01905 41d6112ab4da549fb0057723c4231269 255 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 123 239 4.8E-38 T 22-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal PGJ_RS00225 50751c887b20bee8cd49bdab9e9c13be 584 Pfam PF01368 DHH family 82 216 4.6E-13 T 22-04-2016 IPR001667 DDH domain PGJ_RS00225 50751c887b20bee8cd49bdab9e9c13be 584 SUPERFAMILY SSF64182 57 459 1.28E-111 T 22-04-2016 PGJ_RS00225 50751c887b20bee8cd49bdab9e9c13be 584 PANTHER PTHR30255:SF2 1 580 2.2E-204 T 22-04-2016 PGJ_RS00225 50751c887b20bee8cd49bdab9e9c13be 584 PANTHER PTHR30255 1 580 2.2E-204 T 22-04-2016 PGJ_RS00225 50751c887b20bee8cd49bdab9e9c13be 584 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 30 571 1.3E-159 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 PGJ_RS00225 50751c887b20bee8cd49bdab9e9c13be 584 Pfam PF02272 DHHA1 domain 380 442 6.7E-12 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 PGJ_RS06505 385800737e871f7895c0b0b53532ec22 409 PANTHER PTHR30349:SF26 45 397 1.5E-51 T 22-04-2016 PGJ_RS06505 385800737e871f7895c0b0b53532ec22 409 Pfam PF00589 Phage integrase family 250 387 5.0E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS06505 385800737e871f7895c0b0b53532ec22 409 SUPERFAMILY SSF56349 110 394 2.59E-37 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS06505 385800737e871f7895c0b0b53532ec22 409 Gene3D G3DSA:1.10.443.10 221 398 4.3E-28 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS06505 385800737e871f7895c0b0b53532ec22 409 Pfam PF13102 Phage integrase SAM-like domain 11 173 7.8E-25 T 22-04-2016 IPR025269 Phage integrase SAM-like domain PGJ_RS06505 385800737e871f7895c0b0b53532ec22 409 PANTHER PTHR30349 45 397 1.5E-51 T 22-04-2016 PGJ_RS02595 66a88433040f8c55cfe66b9c782826f1 141 PANTHER PTHR33516 13 141 6.2E-41 T 22-04-2016 PGJ_RS02595 66a88433040f8c55cfe66b9c782826f1 141 SUPERFAMILY SSF51306 14 137 8.37E-34 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PGJ_RS02595 66a88433040f8c55cfe66b9c782826f1 141 Pfam PF00717 Peptidase S24-like 55 120 3.6E-11 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B PGJ_RS02595 66a88433040f8c55cfe66b9c782826f1 141 PANTHER PTHR33516:SF1 13 141 6.2E-41 T 22-04-2016 PGJ_RS02595 66a88433040f8c55cfe66b9c782826f1 141 Gene3D G3DSA:2.10.109.10 25 140 2.7E-43 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PGJ_RS02595 66a88433040f8c55cfe66b9c782826f1 141 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 1.7E-7 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PGJ_RS02595 66a88433040f8c55cfe66b9c782826f1 141 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 1.7E-7 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PGJ_RS02595 66a88433040f8c55cfe66b9c782826f1 141 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 1.7E-7 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PGJ_RS00360 4ef327b85ae4cca0089bd9833aa02663 399 PANTHER PTHR30182:SF1 1 396 2.2E-166 T 22-04-2016 PGJ_RS00360 4ef327b85ae4cca0089bd9833aa02663 399 PANTHER PTHR30182 1 396 2.2E-166 T 22-04-2016 PGJ_RS00360 4ef327b85ae4cca0089bd9833aa02663 399 SUPERFAMILY SSF143548 16 118 1.44E-26 T 22-04-2016 IPR029009 Allosteric substrate binding domain PGJ_RS00360 4ef327b85ae4cca0089bd9833aa02663 399 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 79 396 8.5E-105 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PGJ_RS00360 4ef327b85ae4cca0089bd9833aa02663 399 Gene3D G3DSA:3.30.1330.90 71 117 3.5E-9 T 22-04-2016 IPR029009 Allosteric substrate binding domain PGJ_RS00360 4ef327b85ae4cca0089bd9833aa02663 399 Gene3D G3DSA:3.30.1330.90 10 70 2.0E-21 T 22-04-2016 IPR029009 Allosteric substrate binding domain PGJ_RS00360 4ef327b85ae4cca0089bd9833aa02663 399 Pfam PF03315 Serine dehydratase beta chain 69 115 1.0E-6 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PGJ_RS00360 4ef327b85ae4cca0089bd9833aa02663 399 Pfam PF03315 Serine dehydratase beta chain 3 72 5.6E-20 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PGJ_RS00360 4ef327b85ae4cca0089bd9833aa02663 399 Pfam PF03313 Serine dehydratase alpha chain 148 395 3.6E-81 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit PGJ_RS07980 a29792b9a392401996d619fa7202009e 307 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 28 296 3.3E-50 T 22-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal PGJ_RS07980 a29792b9a392401996d619fa7202009e 307 Gene3D G3DSA:3.40.630.30 3 134 7.7E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS07980 a29792b9a392401996d619fa7202009e 307 PIRSF PIRSF018688 1 301 2.3E-107 T 22-04-2016 IPR016732 Uncharacterised conserved protein UCP018688 PGJ_RS07980 a29792b9a392401996d619fa7202009e 307 Gene3D G3DSA:3.40.630.30 135 291 4.1E-59 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS07980 a29792b9a392401996d619fa7202009e 307 SUPERFAMILY SSF55729 3 139 2.22E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS07980 a29792b9a392401996d619fa7202009e 307 SUPERFAMILY SSF55729 140 298 5.62E-52 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS07980 a29792b9a392401996d619fa7202009e 307 PANTHER PTHR41373 1 293 4.5E-67 T 22-04-2016 PGJ_RS02440 c2790dc827e0c5960c27bdbddbac6aab 292 Gene3D G3DSA:3.40.50.1580 26 292 5.0E-71 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PGJ_RS02440 c2790dc827e0c5960c27bdbddbac6aab 292 PANTHER PTHR21234 14 292 7.8E-52 T 22-04-2016 IPR018017 Nucleoside phosphorylase PGJ_RS02440 c2790dc827e0c5960c27bdbddbac6aab 292 PANTHER PTHR21234:SF8 14 292 7.8E-52 T 22-04-2016 PGJ_RS02440 c2790dc827e0c5960c27bdbddbac6aab 292 Pfam PF01048 Phosphorylase superfamily 33 267 3.1E-34 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PGJ_RS02440 c2790dc827e0c5960c27bdbddbac6aab 292 SUPERFAMILY SSF53167 16 268 6.02E-46 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PGJ_RS01885 56d8f8e3388ff3c041d264a3989173ed 186 Hamap MF_00109 Shikimate kinase [aroK]. 2 171 23.457 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS01885 56d8f8e3388ff3c041d264a3989173ed 186 PRINTS PR01100 Shikimate kinase family signature 96 113 1.9E-21 T 22-04-2016 PGJ_RS01885 56d8f8e3388ff3c041d264a3989173ed 186 PRINTS PR01100 Shikimate kinase family signature 57 65 1.9E-21 T 22-04-2016 PGJ_RS01885 56d8f8e3388ff3c041d264a3989173ed 186 PRINTS PR01100 Shikimate kinase family signature 75 84 1.9E-21 T 22-04-2016 PGJ_RS01885 56d8f8e3388ff3c041d264a3989173ed 186 PRINTS PR01100 Shikimate kinase family signature 29 42 1.9E-21 T 22-04-2016 PGJ_RS01885 56d8f8e3388ff3c041d264a3989173ed 186 PRINTS PR01100 Shikimate kinase family signature 5 20 1.9E-21 T 22-04-2016 PGJ_RS01885 56d8f8e3388ff3c041d264a3989173ed 186 PANTHER PTHR21087:SF0 5 175 3.6E-48 T 22-04-2016 PGJ_RS01885 56d8f8e3388ff3c041d264a3989173ed 186 Pfam PF01202 Shikimate kinase 11 173 1.6E-47 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS01885 56d8f8e3388ff3c041d264a3989173ed 186 Gene3D G3DSA:3.40.50.300 3 177 1.7E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01885 56d8f8e3388ff3c041d264a3989173ed 186 PANTHER PTHR21087 5 175 3.6E-48 T 22-04-2016 PGJ_RS01885 56d8f8e3388ff3c041d264a3989173ed 186 SUPERFAMILY SSF52540 5 161 4.43E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05415 a24b6dee2e380c74040a62b3f2473768 380 PANTHER PTHR30128:SF17 45 380 4.9E-36 T 22-04-2016 PGJ_RS05415 a24b6dee2e380c74040a62b3f2473768 380 Gene3D G3DSA:3.30.1330.60 268 368 2.7E-21 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS05415 a24b6dee2e380c74040a62b3f2473768 380 ProSitePatterns PS01068 OmpA-like domain. 314 359 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PGJ_RS05415 a24b6dee2e380c74040a62b3f2473768 380 SUPERFAMILY SSF103088 275 374 2.49E-21 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS05415 a24b6dee2e380c74040a62b3f2473768 380 PANTHER PTHR30128 45 380 4.9E-36 T 22-04-2016 PGJ_RS05415 a24b6dee2e380c74040a62b3f2473768 380 Pfam PF00691 OmpA family 282 370 2.7E-16 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 SUPERFAMILY SSF49785 31 241 1.98E-54 T 22-04-2016 IPR008979 Galactose-binding domain-like PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 SMART SM01038 778 1107 3.2E-116 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 SUPERFAMILY SSF49303 245 353 1.87E-21 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 SUPERFAMILY SSF74650 764 890 9.73E-72 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 SUPERFAMILY SSF74650 919 1021 9.73E-72 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 SUPERFAMILY SSF74650 1054 1109 9.73E-72 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 PANTHER PTHR10066:SF72 620 1026 0.0 T 22-04-2016 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 PANTHER PTHR10066:SF72 32 601 0.0 T 22-04-2016 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 PANTHER PTHR10066:SF72 1052 1116 0.0 T 22-04-2016 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 Gene3D G3DSA:2.60.120.260 28 230 2.7E-66 T 22-04-2016 IPR008979 Galactose-binding domain-like PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 Pfam PF02929 Beta galactosidase small chain 782 1106 1.2E-60 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 PANTHER PTHR10066 620 1026 0.0 T 22-04-2016 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 PANTHER PTHR10066 32 601 0.0 T 22-04-2016 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 PANTHER PTHR10066 1052 1116 0.0 T 22-04-2016 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 Gene3D G3DSA:2.60.40.320 231 353 4.3E-29 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 72 241 5.6E-34 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 Gene3D G3DSA:2.70.98.10 764 1021 4.2E-81 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 Gene3D G3DSA:2.70.98.10 1054 1109 4.2E-81 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 Pfam PF00703 Glycosyl hydrolases family 2 244 353 1.0E-16 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 SUPERFAMILY SSF49303 656 753 3.17E-22 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 SUPERFAMILY SSF51445 373 650 1.27E-84 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 Pfam PF16353 Domain of unknown function(DUF4981) 665 753 1.2E-17 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 Gene3D G3DSA:2.60.40.320 651 753 5.5E-27 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 Gene3D G3DSA:3.20.20.80 373 649 3.5E-96 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 373 653 1.1E-88 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 PRINTS PR00132 Glycosyl hydrolase family 2 signature 406 424 1.7E-27 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 PRINTS PR00132 Glycosyl hydrolase family 2 signature 556 571 1.7E-27 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 PRINTS PR00132 Glycosyl hydrolase family 2 signature 169 184 1.7E-27 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 PRINTS PR00132 Glycosyl hydrolase family 2 signature 482 497 1.7E-27 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS05785 1ae295b26bcca3d4843829c3ed29424e 1123 PRINTS PR00132 Glycosyl hydrolase family 2 signature 375 389 1.7E-27 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS06485 475b0efd86e766b3fd588ffcdc70e5c6 723 SUPERFAMILY SSF53474 475 723 6.57E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS06485 475b0efd86e766b3fd588ffcdc70e5c6 723 Gene3D G3DSA:3.40.50.1820 476 722 6.7E-81 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS06485 475b0efd86e766b3fd588ffcdc70e5c6 723 PANTHER PTHR11731:SF110 5 723 6.3E-207 T 22-04-2016 PGJ_RS06485 475b0efd86e766b3fd588ffcdc70e5c6 723 SUPERFAMILY SSF82171 42 470 1.11E-57 T 22-04-2016 PGJ_RS06485 475b0efd86e766b3fd588ffcdc70e5c6 723 PANTHER PTHR11731 5 723 6.3E-207 T 22-04-2016 PGJ_RS06485 475b0efd86e766b3fd588ffcdc70e5c6 723 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 98 440 2.1E-102 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 PGJ_RS06485 475b0efd86e766b3fd588ffcdc70e5c6 723 Pfam PF00326 Prolyl oligopeptidase family 524 722 3.1E-53 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PGJ_RS06485 475b0efd86e766b3fd588ffcdc70e5c6 723 Gene3D G3DSA:2.140.10.30 23 470 8.0E-112 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 PGJ_RS07670 e94ff6d463531e792654981841071b18 194 Gene3D G3DSA:3.90.20.20 38 135 9.0E-27 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil PGJ_RS07670 e94ff6d463531e792654981841071b18 194 Pfam PF01025 GrpE 33 193 7.5E-44 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PGJ_RS07670 e94ff6d463531e792654981841071b18 194 SUPERFAMILY SSF51064 138 193 1.83E-10 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 PGJ_RS07670 e94ff6d463531e792654981841071b18 194 PRINTS PR00773 GrpE protein signature 91 106 4.8E-20 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PGJ_RS07670 e94ff6d463531e792654981841071b18 194 PRINTS PR00773 GrpE protein signature 63 79 4.8E-20 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PGJ_RS07670 e94ff6d463531e792654981841071b18 194 PRINTS PR00773 GrpE protein signature 173 192 4.8E-20 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PGJ_RS07670 e94ff6d463531e792654981841071b18 194 PRINTS PR00773 GrpE protein signature 145 160 4.8E-20 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PGJ_RS07670 e94ff6d463531e792654981841071b18 194 PANTHER PTHR21237 29 192 1.3E-38 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PGJ_RS07670 e94ff6d463531e792654981841071b18 194 Gene3D G3DSA:2.30.22.10 137 192 5.5E-15 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 PGJ_RS07670 e94ff6d463531e792654981841071b18 194 Hamap MF_01151 Protein GrpE [grpE]. 2 194 17.495 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PGJ_RS07670 e94ff6d463531e792654981841071b18 194 ProSitePatterns PS01071 grpE protein signature. 148 192 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PGJ_RS07670 e94ff6d463531e792654981841071b18 194 SUPERFAMILY SSF58014 42 137 6.02E-25 T 22-04-2016 PGJ_RS07620 84592518951d688f759a103b6fa90b55 193 PANTHER PTHR10520 1 183 3.5E-62 T 22-04-2016 PGJ_RS07620 84592518951d688f759a103b6fa90b55 193 Pfam PF00551 Formyl transferase 3 182 6.2E-39 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PGJ_RS07620 84592518951d688f759a103b6fa90b55 193 PANTHER PTHR10520:SF9 1 183 3.5E-62 T 22-04-2016 PGJ_RS07620 84592518951d688f759a103b6fa90b55 193 Gene3D G3DSA:3.40.50.170 2 186 2.0E-49 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PGJ_RS07620 84592518951d688f759a103b6fa90b55 193 SUPERFAMILY SSF53328 3 185 7.59E-46 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PGJ_RS07620 84592518951d688f759a103b6fa90b55 193 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 25.108 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 PGJ_RS07565 811711c0e5fd31f77d55d666aba9d80d 841 Pfam PF00326 Prolyl oligopeptidase family 622 827 1.4E-42 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PGJ_RS07565 811711c0e5fd31f77d55d666aba9d80d 841 SUPERFAMILY SSF53474 571 825 1.84E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS07565 811711c0e5fd31f77d55d666aba9d80d 841 PANTHER PTHR11731:SF75 383 840 2.6E-94 T 22-04-2016 PGJ_RS07565 811711c0e5fd31f77d55d666aba9d80d 841 Gene3D G3DSA:2.130.10.10 209 548 3.6E-19 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PGJ_RS07565 811711c0e5fd31f77d55d666aba9d80d 841 PANTHER PTHR11731 383 840 2.6E-94 T 22-04-2016 PGJ_RS07565 811711c0e5fd31f77d55d666aba9d80d 841 Gene3D G3DSA:3.40.50.1820 571 826 1.6E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS07565 811711c0e5fd31f77d55d666aba9d80d 841 SUPERFAMILY SSF82171 206 567 1.57E-23 T 22-04-2016 PGJ_RS02230 a2595e2664edc0e1ce464d4171147830 556 PANTHER PTHR31377:SF0 77 366 1.3E-20 T 22-04-2016 PGJ_RS02230 a2595e2664edc0e1ce464d4171147830 556 SUPERFAMILY SSF55909 45 356 6.07E-57 T 22-04-2016 PGJ_RS02230 a2595e2664edc0e1ce464d4171147830 556 PANTHER PTHR31377 77 366 1.3E-20 T 22-04-2016 PGJ_RS02230 a2595e2664edc0e1ce464d4171147830 556 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 77 355 4.6E-30 T 22-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PGJ_RS02230 a2595e2664edc0e1ce464d4171147830 556 Gene3D G3DSA:3.75.10.10 54 363 1.7E-51 T 22-04-2016 PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 503 1.7E-185 T 22-04-2016 IPR004482 Mg chelatase-related protein PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 SMART SM00382 213 396 8.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 PANTHER PTHR32039:SF7 1 507 1.1E-244 T 22-04-2016 IPR004482 Mg chelatase-related protein PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 Gene3D G3DSA:3.40.50.300 192 391 7.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 Pfam PF01078 Magnesium chelatase, subunit ChlI 193 398 2.4E-97 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 Gene3D G3DSA:3.30.230.10 7 167 1.7E-30 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 SUPERFAMILY SSF52540 192 505 2.08E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 SUPERFAMILY SSF54211 6 168 3.3E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 293 307 2.1E-6 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 212 227 2.1E-6 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 321 334 2.1E-6 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 345 357 2.1E-6 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 141 1.7E-39 T 22-04-2016 PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 PANTHER PTHR32039 1 507 1.1E-244 T 22-04-2016 PGJ_RS07630 7e65966f6ecdaf87f4984a079a9a8be0 513 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 407 503 1.1E-31 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain PGJ_RS06190 f628dfc60f861ad7bbb8918ac255938a 337 SUPERFAMILY SSF55347 127 317 2.08E-73 T 22-04-2016 PGJ_RS06190 f628dfc60f861ad7bbb8918ac255938a 337 Gene3D G3DSA:3.40.50.720 1 139 3.0E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS06190 f628dfc60f861ad7bbb8918ac255938a 337 SUPERFAMILY SSF51735 1 154 1.4E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS06190 f628dfc60f861ad7bbb8918ac255938a 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 137 316 8.3E-57 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PGJ_RS06190 f628dfc60f861ad7bbb8918ac255938a 337 PANTHER PTHR10174:SF2 64 330 3.8E-69 T 22-04-2016 PGJ_RS06190 f628dfc60f861ad7bbb8918ac255938a 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 114 1.2E-30 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PGJ_RS06190 f628dfc60f861ad7bbb8918ac255938a 337 Gene3D G3DSA:3.30.360.10 140 313 1.5E-77 T 22-04-2016 PGJ_RS06190 f628dfc60f861ad7bbb8918ac255938a 337 PANTHER PTHR10174 64 330 3.8E-69 T 22-04-2016 PGJ_RS06190 f628dfc60f861ad7bbb8918ac255938a 337 PIRSF PIRSF000148 1 335 2.3E-124 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PGJ_RS06190 f628dfc60f861ad7bbb8918ac255938a 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 330 34.591 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PGJ_RS06190 f628dfc60f861ad7bbb8918ac255938a 337 SMART SM00859 2 118 2.9E-37 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PGJ_RS06190 f628dfc60f861ad7bbb8918ac255938a 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 2 331 2.0E-123 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PGJ_RS04850 1a4fbcabaa631c976d740a21c796f911 106 Pfam PF13560 Helix-turn-helix domain 22 77 1.8E-8 T 22-04-2016 PGJ_RS04850 1a4fbcabaa631c976d740a21c796f911 106 SUPERFAMILY SSF47413 17 81 6.72E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS04850 1a4fbcabaa631c976d740a21c796f911 106 Gene3D G3DSA:1.10.260.40 15 86 1.6E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS04850 1a4fbcabaa631c976d740a21c796f911 106 SMART SM00530 24 79 6.5E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 PRINTS PR00987 Glutamyl-tRNA synthetase signature 25 36 2.5E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 PRINTS PR00987 Glutamyl-tRNA synthetase signature 217 225 2.5E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 PRINTS PR00987 Glutamyl-tRNA synthetase signature 11 23 2.5E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 PRINTS PR00987 Glutamyl-tRNA synthetase signature 40 53 2.5E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 PRINTS PR00987 Glutamyl-tRNA synthetase signature 201 211 2.5E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 8 501 3.3E-139 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 8 503 31.912 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 8 345 1.2E-90 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 Gene3D G3DSA:3.40.50.620 203 254 3.9E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 Gene3D G3DSA:3.40.50.620 8 72 3.9E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 Gene3D G3DSA:1.10.1160.10 258 356 5.3E-32 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 PANTHER PTHR11451 286 396 7.8E-97 T 22-04-2016 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 PANTHER PTHR11451 1 254 7.8E-97 T 22-04-2016 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 PANTHER PTHR11451:SF41 286 396 7.8E-97 T 22-04-2016 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 PANTHER PTHR11451:SF41 1 254 7.8E-97 T 22-04-2016 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 Gene3D G3DSA:3.90.800.10 73 202 9.8E-33 T 22-04-2016 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 SUPERFAMILY SSF48163 322 503 2.88E-42 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 SUPERFAMILY SSF52374 8 340 2.06E-96 T 22-04-2016 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 Gene3D G3DSA:1.10.10.350 405 504 1.4E-26 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PGJ_RS02050 8ed91eff6f386c5af23300f4c135b046 507 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS01685 1319efb736b2bce435a2aafd94938e15 156 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 2.9E-28 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PGJ_RS01685 1319efb736b2bce435a2aafd94938e15 156 Gene3D G3DSA:1.10.287.180 3 75 2.9E-29 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PGJ_RS01685 1319efb736b2bce435a2aafd94938e15 156 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 28.546 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PGJ_RS01685 1319efb736b2bce435a2aafd94938e15 156 Gene3D G3DSA:3.10.50.30 76 154 3.8E-24 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PGJ_RS01685 1319efb736b2bce435a2aafd94938e15 156 PIRSF PIRSF006092 1 156 1.3E-51 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PGJ_RS01685 1319efb736b2bce435a2aafd94938e15 156 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PGJ_RS01685 1319efb736b2bce435a2aafd94938e15 156 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 1.9E-55 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 PGJ_RS01685 1319efb736b2bce435a2aafd94938e15 156 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 155 3.7E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PGJ_RS01685 1319efb736b2bce435a2aafd94938e15 156 PANTHER PTHR30437 1 154 1.2E-53 T 22-04-2016 PGJ_RS01685 1319efb736b2bce435a2aafd94938e15 156 SUPERFAMILY SSF46557 3 78 4.05E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PGJ_RS01685 1319efb736b2bce435a2aafd94938e15 156 SUPERFAMILY SSF54534 82 155 1.24E-17 T 22-04-2016 PGJ_RS01260 24d251e7512c6cdab35291b8ee8918f9 319 Gene3D G3DSA:3.30.420.40 2 143 5.0E-41 T 22-04-2016 PGJ_RS01260 24d251e7512c6cdab35291b8ee8918f9 319 ProSitePatterns PS01125 ROK family signature. 139 166 - T 22-04-2016 IPR000600 ROK family PGJ_RS01260 24d251e7512c6cdab35291b8ee8918f9 319 PANTHER PTHR18964 1 317 7.2E-90 T 22-04-2016 PGJ_RS01260 24d251e7512c6cdab35291b8ee8918f9 319 SUPERFAMILY SSF53067 5 316 6.95E-62 T 22-04-2016 PGJ_RS01260 24d251e7512c6cdab35291b8ee8918f9 319 PANTHER PTHR18964:SF123 1 317 7.2E-90 T 22-04-2016 PGJ_RS01260 24d251e7512c6cdab35291b8ee8918f9 319 Pfam PF00480 ROK family 7 314 1.1E-61 T 22-04-2016 IPR000600 ROK family PGJ_RS01260 24d251e7512c6cdab35291b8ee8918f9 319 Gene3D G3DSA:3.30.420.40 144 299 9.5E-52 T 22-04-2016 PGJ_RS04830 15afed65f3c39ce0d480f7110c768509 74 SMART SM00530 10 65 1.1E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PGJ_RS04830 15afed65f3c39ce0d480f7110c768509 74 TIGRFAM TIGR03070 couple_hipB: transcriptional regulator, y4mF family 6 62 6.4E-26 T 22-04-2016 IPR017507 Transcription regulator, HipB-like PGJ_RS04830 15afed65f3c39ce0d480f7110c768509 74 SUPERFAMILY SSF47413 2 61 1.74E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS04830 15afed65f3c39ce0d480f7110c768509 74 Pfam PF01381 Helix-turn-helix 11 59 1.5E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PGJ_RS04830 15afed65f3c39ce0d480f7110c768509 74 Gene3D G3DSA:1.10.260.40 4 59 7.9E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS03455 4ea67e0ff2a5b4400686d111274f2f90 584 PANTHER PTHR24222 19 584 7.0E-173 T 22-04-2016 PGJ_RS03455 4ea67e0ff2a5b4400686d111274f2f90 584 SMART SM00382 366 552 4.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS03455 4ea67e0ff2a5b4400686d111274f2f90 584 SUPERFAMILY SSF90123 8 332 3.79E-48 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PGJ_RS03455 4ea67e0ff2a5b4400686d111274f2f90 584 Pfam PF00005 ABC transporter 358 506 5.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS03455 4ea67e0ff2a5b4400686d111274f2f90 584 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS03455 4ea67e0ff2a5b4400686d111274f2f90 584 Gene3D G3DSA:3.40.50.300 340 571 4.8E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03455 4ea67e0ff2a5b4400686d111274f2f90 584 SUPERFAMILY SSF52540 333 575 2.77E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03455 4ea67e0ff2a5b4400686d111274f2f90 584 Pfam PF00664 ABC transporter transmembrane region 22 282 3.3E-28 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PGJ_RS03455 4ea67e0ff2a5b4400686d111274f2f90 584 PANTHER PTHR24222:SF24 19 584 7.0E-173 T 22-04-2016 PGJ_RS03455 4ea67e0ff2a5b4400686d111274f2f90 584 Gene3D G3DSA:1.20.1560.10 8 325 8.2E-41 T 22-04-2016 PGJ_RS04450 15a69b8f77712fd07b59a111f4d840e9 325 SUPERFAMILY SSF52540 2 221 2.44E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04450 15a69b8f77712fd07b59a111f4d840e9 325 PANTHER PTHR24220:SF450 5 235 3.1E-94 T 22-04-2016 PGJ_RS04450 15a69b8f77712fd07b59a111f4d840e9 325 Pfam PF13732 Domain of unknown function (DUF4162) 213 299 1.4E-10 T 22-04-2016 IPR025302 Domain of unknown function DUF4162 PGJ_RS04450 15a69b8f77712fd07b59a111f4d840e9 325 Gene3D G3DSA:3.40.50.300 3 223 4.2E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04450 15a69b8f77712fd07b59a111f4d840e9 325 SMART SM00382 28 216 2.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS04450 15a69b8f77712fd07b59a111f4d840e9 325 PANTHER PTHR24220 5 235 3.1E-94 T 22-04-2016 PGJ_RS04450 15a69b8f77712fd07b59a111f4d840e9 325 Pfam PF00005 ABC transporter 19 159 1.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS04450 15a69b8f77712fd07b59a111f4d840e9 325 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS08735 9d879c5ce3c8ece6eeaa91b7d15bf3a9 682 SUPERFAMILY SSF52540 382 591 3.88E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08735 9d879c5ce3c8ece6eeaa91b7d15bf3a9 682 SUPERFAMILY SSF56731 220 366 1.7E-9 T 22-04-2016 PGJ_RS08735 9d879c5ce3c8ece6eeaa91b7d15bf3a9 682 Gene3D G3DSA:3.40.50.300 385 583 2.8E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08735 9d879c5ce3c8ece6eeaa91b7d15bf3a9 682 Pfam PF13155 Toprim-like 243 325 2.0E-5 T 22-04-2016 PGJ_RS08735 9d879c5ce3c8ece6eeaa91b7d15bf3a9 682 Pfam PF13481 AAA domain 385 541 3.7E-8 T 22-04-2016 PGJ_RS08735 9d879c5ce3c8ece6eeaa91b7d15bf3a9 682 Gene3D G3DSA:3.40.1360.10 221 341 6.4E-19 T 22-04-2016 PGJ_RS05800 1278a8f014550b0fa1545169f40ca11c 184 SUPERFAMILY SSF55469 1 175 6.67E-38 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PGJ_RS05800 1278a8f014550b0fa1545169f40ca11c 184 Gene3D G3DSA:3.40.109.10 1 176 6.5E-43 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PGJ_RS05800 1278a8f014550b0fa1545169f40ca11c 184 PANTHER PTHR23026:SF117 1 178 3.3E-54 T 22-04-2016 PGJ_RS05800 1278a8f014550b0fa1545169f40ca11c 184 PANTHER PTHR23026 1 178 3.3E-54 T 22-04-2016 PGJ_RS05800 1278a8f014550b0fa1545169f40ca11c 184 Pfam PF00881 Nitroreductase family 68 152 6.3E-9 T 22-04-2016 IPR029479 Nitroreductase PGJ_RS05800 1278a8f014550b0fa1545169f40ca11c 184 Pfam PF00881 Nitroreductase family 8 58 1.2E-11 T 22-04-2016 IPR029479 Nitroreductase PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 126 292 6.9E-64 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 SUPERFAMILY SSF51735 125 290 9.98E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 SUPERFAMILY SSF53223 5 124 7.58E-39 T 22-04-2016 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 272 280 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 Hamap MF_01576 Bifunctional protein FolD [folD]. 5 295 37.13 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 78 103 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 7 123 2.1E-40 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 PANTHER PTHR10025 6 292 9.1E-166 T 22-04-2016 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 77 104 3.9E-80 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 268 286 3.9E-80 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 251 267 3.9E-80 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 157 177 3.9E-80 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 36 58 3.9E-80 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 112 133 3.9E-80 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 210 239 3.9E-80 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 Gene3D G3DSA:3.40.50.720 143 276 2.1E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03720 811ef6afe202db569aeaa4b54aa9900a 296 Gene3D G3DSA:3.40.192.10 9 142 2.5E-47 T 22-04-2016 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 SUPERFAMILY SSF74650 789 1068 4.55E-61 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 PANTHER PTHR10066 20 622 1.1E-269 T 22-04-2016 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 PANTHER PTHR10066 641 1068 1.1E-269 T 22-04-2016 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 SMART SM01038 801 1066 9.8E-82 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 437 462 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 503 517 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 Gene3D G3DSA:3.20.20.80 388 671 2.7E-87 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 PRINTS PR00132 Glycosyl hydrolase family 2 signature 427 445 2.2E-30 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 PRINTS PR00132 Glycosyl hydrolase family 2 signature 196 211 2.2E-30 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 PRINTS PR00132 Glycosyl hydrolase family 2 signature 577 592 2.2E-30 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 PRINTS PR00132 Glycosyl hydrolase family 2 signature 396 410 2.2E-30 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 PRINTS PR00132 Glycosyl hydrolase family 2 signature 503 518 2.2E-30 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 Pfam PF02929 Beta galactosidase small chain 805 1064 2.3E-52 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 388 676 1.0E-83 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 Gene3D G3DSA:2.60.40.320 672 778 1.2E-24 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 93 268 1.1E-37 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 Pfam PF16353 Domain of unknown function(DUF4981) 686 774 1.4E-19 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 Pfam PF00703 Glycosyl hydrolases family 2 270 385 4.6E-15 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 SUPERFAMILY SSF51445 388 672 6.38E-77 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 Gene3D G3DSA:2.70.98.10 787 1068 1.4E-60 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 SUPERFAMILY SSF49785 45 268 5.71E-55 T 22-04-2016 IPR008979 Galactose-binding domain-like PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 Gene3D G3DSA:2.60.120.260 43 257 2.6E-69 T 22-04-2016 IPR008979 Galactose-binding domain-like PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 SUPERFAMILY SSF49303 271 385 5.76E-13 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 Gene3D G3DSA:2.60.40.320 258 385 1.3E-22 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 PANTHER PTHR10066:SF72 20 622 1.1E-269 T 22-04-2016 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 PANTHER PTHR10066:SF72 641 1068 1.1E-269 T 22-04-2016 PGJ_RS04670 def7f59ee22d1d9868ec3182f236bb37 1068 SUPERFAMILY SSF49303 668 776 8.63E-27 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PGJ_RS07210 bf5d6febae50cdd66f7e56f79070dfa7 256 SUPERFAMILY SSF56784 31 245 2.52E-44 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS07210 bf5d6febae50cdd66f7e56f79070dfa7 256 Gene3D G3DSA:1.10.150.240 46 113 4.1E-23 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PGJ_RS07210 bf5d6febae50cdd66f7e56f79070dfa7 256 Pfam PF13419 Haloacid dehalogenase-like hydrolase 34 215 1.5E-15 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS07210 bf5d6febae50cdd66f7e56f79070dfa7 256 Gene3D G3DSA:3.40.50.1000 118 246 3.2E-36 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS07210 bf5d6febae50cdd66f7e56f79070dfa7 256 Gene3D G3DSA:3.40.50.1000 22 44 3.2E-36 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS07210 bf5d6febae50cdd66f7e56f79070dfa7 256 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 167 215 1.1E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PGJ_RS07210 bf5d6febae50cdd66f7e56f79070dfa7 256 PANTHER PTHR18901 29 247 4.7E-44 T 22-04-2016 PGJ_RS07815 9f781c8da2eba575b0dfb9417d344c3d 584 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 87 205 7.8E-32 T 22-04-2016 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PGJ_RS07815 9f781c8da2eba575b0dfb9417d344c3d 584 SUPERFAMILY SSF47917 451 537 2.2E-9 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PGJ_RS07815 9f781c8da2eba575b0dfb9417d344c3d 584 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 427 436 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PGJ_RS07815 9f781c8da2eba575b0dfb9417d344c3d 584 SUPERFAMILY SSF52540 169 440 1.14E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07815 9f781c8da2eba575b0dfb9417d344c3d 584 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 71 4.7E-7 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PGJ_RS07815 9f781c8da2eba575b0dfb9417d344c3d 584 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 2 582 41.258 T 22-04-2016 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PGJ_RS07815 9f781c8da2eba575b0dfb9417d344c3d 584 PANTHER PTHR15184:SF7 184 575 2.5E-214 T 22-04-2016 PGJ_RS07815 9f781c8da2eba575b0dfb9417d344c3d 584 PANTHER PTHR15184:SF7 3 102 2.5E-214 T 22-04-2016 PGJ_RS07815 9f781c8da2eba575b0dfb9417d344c3d 584 Gene3D G3DSA:3.40.50.300 172 438 5.9E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07815 9f781c8da2eba575b0dfb9417d344c3d 584 PANTHER PTHR15184 184 575 2.5E-214 T 22-04-2016 PGJ_RS07815 9f781c8da2eba575b0dfb9417d344c3d 584 PANTHER PTHR15184 3 102 2.5E-214 T 22-04-2016 PGJ_RS07815 9f781c8da2eba575b0dfb9417d344c3d 584 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 215 436 5.2E-76 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PGJ_RS01865 38c30ef8a742e7213e44f947c7cd03f0 126 PANTHER PTHR33823 3 122 6.5E-28 T 22-04-2016 PGJ_RS01865 38c30ef8a742e7213e44f947c7cd03f0 126 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 91 119 1.1E-7 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PGJ_RS01865 38c30ef8a742e7213e44f947c7cd03f0 126 SUPERFAMILY SSF109635 7 92 2.22E-6 T 22-04-2016 PGJ_RS01865 38c30ef8a742e7213e44f947c7cd03f0 126 SUPERFAMILY SSF57716 93 121 9.27E-5 T 22-04-2016 PGJ_RS09890 a4016bff4692f496fbbc0e1481e28e8f 189 SUPERFAMILY SSF56420 1 171 6.93E-56 T 22-04-2016 IPR023635 Peptide deformylase PGJ_RS09890 a4016bff4692f496fbbc0e1481e28e8f 189 PANTHER PTHR10458 1 169 9.8E-61 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PGJ_RS09890 a4016bff4692f496fbbc0e1481e28e8f 189 PRINTS PR01576 Peptide deformylase signature 96 107 7.8E-33 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PGJ_RS09890 a4016bff4692f496fbbc0e1481e28e8f 189 PRINTS PR01576 Peptide deformylase signature 32 61 7.8E-33 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PGJ_RS09890 a4016bff4692f496fbbc0e1481e28e8f 189 PRINTS PR01576 Peptide deformylase signature 108 126 7.8E-33 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PGJ_RS09890 a4016bff4692f496fbbc0e1481e28e8f 189 PRINTS PR01576 Peptide deformylase signature 127 156 7.8E-33 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PGJ_RS09890 a4016bff4692f496fbbc0e1481e28e8f 189 Pfam PF01327 Polypeptide deformylase 4 159 3.5E-48 T 22-04-2016 IPR023635 Peptide deformylase PGJ_RS09890 a4016bff4692f496fbbc0e1481e28e8f 189 PIRSF PIRSF004749 1 185 5.1E-59 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PGJ_RS09890 a4016bff4692f496fbbc0e1481e28e8f 189 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 165 6.7E-39 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PGJ_RS09890 a4016bff4692f496fbbc0e1481e28e8f 189 Gene3D G3DSA:3.90.45.10 3 178 1.7E-59 T 22-04-2016 IPR023635 Peptide deformylase PGJ_RS09890 a4016bff4692f496fbbc0e1481e28e8f 189 Hamap MF_00163 Peptide deformylase [def]. 1 169 27.724 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PGJ_RS00730 504d5daeb70189c74fa00b18969512d4 246 Gene3D G3DSA:3.40.50.2020 79 233 1.4E-32 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS00730 504d5daeb70189c74fa00b18969512d4 246 PANTHER PTHR11907 28 231 2.7E-39 T 22-04-2016 PGJ_RS00730 504d5daeb70189c74fa00b18969512d4 246 PANTHER PTHR11907:SF9 28 231 2.7E-39 T 22-04-2016 PGJ_RS00730 504d5daeb70189c74fa00b18969512d4 246 Pfam PF00156 Phosphoribosyl transferase domain 140 235 6.3E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PGJ_RS00730 504d5daeb70189c74fa00b18969512d4 246 SUPERFAMILY SSF53271 82 231 1.31E-25 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS04390 43a8f24a9d059bc72444e53618f6ea14 460 PANTHER PTHR30213 26 458 1.8E-90 T 22-04-2016 PGJ_RS04390 43a8f24a9d059bc72444e53618f6ea14 460 PANTHER PTHR30213:SF0 26 458 1.8E-90 T 22-04-2016 PGJ_RS04390 43a8f24a9d059bc72444e53618f6ea14 460 Pfam PF03631 Virulence factor BrkB 66 316 1.8E-47 T 22-04-2016 IPR017039 Virulence factor BrkB PGJ_RS04390 43a8f24a9d059bc72444e53618f6ea14 460 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 61 315 2.2E-35 T 22-04-2016 IPR017039 Virulence factor BrkB PGJ_RS09535 a7676379ded5a02f766858ba467bac2e 315 PANTHER PTHR11019:SF80 62 311 4.7E-59 T 22-04-2016 PGJ_RS09535 a7676379ded5a02f766858ba467bac2e 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 287 6.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PGJ_RS09535 a7676379ded5a02f766858ba467bac2e 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 303 6.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PGJ_RS09535 a7676379ded5a02f766858ba467bac2e 315 SUPERFAMILY SSF51215 62 185 9.15E-5 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PGJ_RS09535 a7676379ded5a02f766858ba467bac2e 315 PANTHER PTHR11019 62 311 4.7E-59 T 22-04-2016 PGJ_RS09535 a7676379ded5a02f766858ba467bac2e 315 SMART SM00342 220 303 2.5E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PGJ_RS09535 a7676379ded5a02f766858ba467bac2e 315 Pfam PF12833 Helix-turn-helix domain 226 304 7.9E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PGJ_RS09535 a7676379ded5a02f766858ba467bac2e 315 SUPERFAMILY SSF46689 258 305 1.43E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09535 a7676379ded5a02f766858ba467bac2e 315 Gene3D G3DSA:1.10.10.60 258 306 8.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09535 a7676379ded5a02f766858ba467bac2e 315 Gene3D G3DSA:2.60.120.280 64 186 3.0E-4 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PGJ_RS07335 ee9e325a337a76699c2c5af5f1a9e3f6 368 PANTHER PTHR23408:SF17 19 362 2.2E-172 T 22-04-2016 PGJ_RS07335 ee9e325a337a76699c2c5af5f1a9e3f6 368 Gene3D G3DSA:3.40.50.300 91 294 1.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07335 ee9e325a337a76699c2c5af5f1a9e3f6 368 Gene3D G3DSA:1.20.5.170 34 90 7.5E-22 T 22-04-2016 PGJ_RS07335 ee9e325a337a76699c2c5af5f1a9e3f6 368 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 53 357 4.8E-100 T 22-04-2016 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 PGJ_RS07335 ee9e325a337a76699c2c5af5f1a9e3f6 368 Pfam PF03308 ArgK protein 58 328 4.0E-101 T 22-04-2016 PGJ_RS07335 ee9e325a337a76699c2c5af5f1a9e3f6 368 PANTHER PTHR23408 19 362 2.2E-172 T 22-04-2016 PGJ_RS07335 ee9e325a337a76699c2c5af5f1a9e3f6 368 SUPERFAMILY SSF52540 41 361 1.54E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04205 ca1e293829f43e980acccd708e74a77d 759 Pfam PF00326 Prolyl oligopeptidase family 544 758 4.1E-45 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PGJ_RS04205 ca1e293829f43e980acccd708e74a77d 759 Gene3D G3DSA:2.120.10.30 157 403 1.4E-16 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PGJ_RS04205 ca1e293829f43e980acccd708e74a77d 759 PANTHER PTHR11731:SF140 400 758 4.5E-104 T 22-04-2016 PGJ_RS04205 ca1e293829f43e980acccd708e74a77d 759 PANTHER PTHR11731:SF140 132 244 4.5E-104 T 22-04-2016 PGJ_RS04205 ca1e293829f43e980acccd708e74a77d 759 Gene3D G3DSA:3.40.50.1820 445 758 2.0E-89 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS04205 ca1e293829f43e980acccd708e74a77d 759 SUPERFAMILY SSF82171 325 498 3.92E-5 T 22-04-2016 PGJ_RS04205 ca1e293829f43e980acccd708e74a77d 759 SUPERFAMILY SSF82171 158 338 1.37E-17 T 22-04-2016 PGJ_RS04205 ca1e293829f43e980acccd708e74a77d 759 SUPERFAMILY SSF53474 497 758 1.2E-69 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS04205 ca1e293829f43e980acccd708e74a77d 759 PANTHER PTHR11731 400 758 4.5E-104 T 22-04-2016 PGJ_RS04205 ca1e293829f43e980acccd708e74a77d 759 PANTHER PTHR11731 132 244 4.5E-104 T 22-04-2016 PGJ_RS09845 863cfddc195a1010a3e080448429beb2 246 Gene3D G3DSA:3.40.50.300 8 224 2.0E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09845 863cfddc195a1010a3e080448429beb2 246 PANTHER PTHR24220 14 223 1.6E-77 T 22-04-2016 PGJ_RS09845 863cfddc195a1010a3e080448429beb2 246 SUPERFAMILY SSF52540 14 221 5.45E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09845 863cfddc195a1010a3e080448429beb2 246 PANTHER PTHR24220:SF470 14 223 1.6E-77 T 22-04-2016 PGJ_RS09845 863cfddc195a1010a3e080448429beb2 246 Pfam PF00005 ABC transporter 29 176 6.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS09845 863cfddc195a1010a3e080448429beb2 246 SMART SM00382 37 226 2.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS09845 863cfddc195a1010a3e080448429beb2 246 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS03505 dce7d7d87203dc4ccf0fd125a06a3cd8 307 SUPERFAMILY SSF51395 11 303 6.6E-81 T 22-04-2016 PGJ_RS03505 dce7d7d87203dc4ccf0fd125a06a3cd8 307 Gene3D G3DSA:3.20.20.70 3 302 2.0E-90 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS03505 dce7d7d87203dc4ccf0fd125a06a3cd8 307 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 300 2.7E-107 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PGJ_RS03505 dce7d7d87203dc4ccf0fd125a06a3cd8 307 Pfam PF01180 Dihydroorotate dehydrogenase 11 287 4.6E-72 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PGJ_RS03505 dce7d7d87203dc4ccf0fd125a06a3cd8 307 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 41 60 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 PGJ_RS03505 dce7d7d87203dc4ccf0fd125a06a3cd8 307 PANTHER PTHR11938 12 300 3.4E-61 T 22-04-2016 PGJ_RS03505 dce7d7d87203dc4ccf0fd125a06a3cd8 307 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 240 260 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 PGJ_RS03505 dce7d7d87203dc4ccf0fd125a06a3cd8 307 PANTHER PTHR11938:SF5 12 300 3.4E-61 T 22-04-2016 PGJ_RS03505 dce7d7d87203dc4ccf0fd125a06a3cd8 307 PIRSF PIRSF000164 1 303 4.5E-79 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 PGJ_RS03505 dce7d7d87203dc4ccf0fd125a06a3cd8 307 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 302 40.147 T 22-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 PGJ_RS04760 d952dffe4722df97ec1da3e910a0be1a 120 SUPERFAMILY SSF46955 41 89 7.87E-5 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS04760 d952dffe4722df97ec1da3e910a0be1a 120 Pfam PF12728 Helix-turn-helix domain 43 90 1.2E-12 T 22-04-2016 PGJ_RS04760 d952dffe4722df97ec1da3e910a0be1a 120 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 44 88 3.6E-10 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 PGJ_RS03105 99b0c634673a0d0fb8797601952b8bcb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03105 99b0c634673a0d0fb8797601952b8bcb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 3.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03105 99b0c634673a0d0fb8797601952b8bcb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 3.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03105 99b0c634673a0d0fb8797601952b8bcb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 3.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03105 99b0c634673a0d0fb8797601952b8bcb 241 Pfam PF00106 short chain dehydrogenase 4 187 5.2E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03105 99b0c634673a0d0fb8797601952b8bcb 241 Gene3D G3DSA:3.40.50.720 2 208 1.2E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03105 99b0c634673a0d0fb8797601952b8bcb 241 PANTHER PTHR24322 8 130 1.4E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03105 99b0c634673a0d0fb8797601952b8bcb 241 PANTHER PTHR24322 146 180 1.4E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03105 99b0c634673a0d0fb8797601952b8bcb 241 SUPERFAMILY SSF51735 2 238 6.07E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03105 99b0c634673a0d0fb8797601952b8bcb 241 PANTHER PTHR24322:SF485 8 130 1.4E-21 T 22-04-2016 PGJ_RS03105 99b0c634673a0d0fb8797601952b8bcb 241 PANTHER PTHR24322:SF485 146 180 1.4E-21 T 22-04-2016 PGJ_RS05375 48310505a9c588cd3e757e28f7172144 345 Gene3D G3DSA:3.40.50.10210 68 323 2.6E-95 T 22-04-2016 PGJ_RS05375 48310505a9c588cd3e757e28f7172144 345 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 10 341 1.7E-121 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PGJ_RS05375 48310505a9c588cd3e757e28f7172144 345 PANTHER PTHR21712:SF4 5 343 2.6E-98 T 22-04-2016 PGJ_RS05375 48310505a9c588cd3e757e28f7172144 345 PANTHER PTHR21712 5 343 2.6E-98 T 22-04-2016 PGJ_RS05375 48310505a9c588cd3e757e28f7172144 345 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 8 343 31.197 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PGJ_RS05375 48310505a9c588cd3e757e28f7172144 345 Gene3D G3DSA:1.10.1610.10 4 67 2.0E-28 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PGJ_RS05375 48310505a9c588cd3e757e28f7172144 345 SUPERFAMILY SSF52733 3 343 7.19E-111 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PGJ_RS05375 48310505a9c588cd3e757e28f7172144 345 Pfam PF02277 Phosphoribosyltransferase 6 341 1.3E-120 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PGJ_RS01565 08a557c2d1f704ae9a19473a6ce9e224 174 Gene3D G3DSA:1.10.10.10 113 173 4.2E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS01565 08a557c2d1f704ae9a19473a6ce9e224 174 Pfam PF04542 Sigma-70 region 2 24 90 2.6E-22 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS01565 08a557c2d1f704ae9a19473a6ce9e224 174 Gene3D G3DSA:1.10.1740.10 1 112 2.2E-36 T 22-04-2016 PGJ_RS01565 08a557c2d1f704ae9a19473a6ce9e224 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 171 1.7E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS01565 08a557c2d1f704ae9a19473a6ce9e224 174 SUPERFAMILY SSF88659 113 173 7.1E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS01565 08a557c2d1f704ae9a19473a6ce9e224 174 PANTHER PTHR30173:SF8 1 173 4.1E-46 T 22-04-2016 PGJ_RS01565 08a557c2d1f704ae9a19473a6ce9e224 174 Pfam PF08281 Sigma-70, region 4 117 168 3.3E-14 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS01565 08a557c2d1f704ae9a19473a6ce9e224 174 SUPERFAMILY SSF88946 2 107 1.53E-32 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS01565 08a557c2d1f704ae9a19473a6ce9e224 174 PANTHER PTHR30173 1 173 4.1E-46 T 22-04-2016 PGJ_RS09605 ae05b416903ad5f294094bf83d27fb1c 335 Gene3D G3DSA:3.40.47.10 1 164 3.4E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PGJ_RS09605 ae05b416903ad5f294094bf83d27fb1c 335 PANTHER PTHR34069 2 334 1.3E-133 T 22-04-2016 PGJ_RS09605 ae05b416903ad5f294094bf83d27fb1c 335 SUPERFAMILY SSF53901 7 327 1.01E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PGJ_RS09605 ae05b416903ad5f294094bf83d27fb1c 335 PANTHER PTHR34069:SF2 2 334 1.3E-133 T 22-04-2016 PGJ_RS09605 ae05b416903ad5f294094bf83d27fb1c 335 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 327 4.6E-112 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PGJ_RS09605 ae05b416903ad5f294094bf83d27fb1c 335 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 188 4.7E-28 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PGJ_RS09605 ae05b416903ad5f294094bf83d27fb1c 335 Gene3D G3DSA:3.40.47.10 165 327 2.9E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PGJ_RS09605 ae05b416903ad5f294094bf83d27fb1c 335 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 327 67.322 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PGJ_RS09605 ae05b416903ad5f294094bf83d27fb1c 335 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 240 327 3.2E-35 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PGJ_RS08330 af223ac0f0794c785384ab51edab2a44 186 Pfam PF00673 ribosomal L5P family C-terminus 87 179 8.0E-37 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal PGJ_RS08330 af223ac0f0794c785384ab51edab2a44 186 SUPERFAMILY SSF55282 6 181 7.77E-68 T 22-04-2016 IPR022803 Ribosomal protein L5 domain PGJ_RS08330 af223ac0f0794c785384ab51edab2a44 186 PIRSF PIRSF002161 1 186 1.5E-61 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08330 af223ac0f0794c785384ab51edab2a44 186 Gene3D G3DSA:3.30.1440.10 6 181 1.6E-67 T 22-04-2016 IPR022803 Ribosomal protein L5 domain PGJ_RS08330 af223ac0f0794c785384ab51edab2a44 186 PANTHER PTHR11994 7 180 2.3E-75 T 22-04-2016 PGJ_RS08330 af223ac0f0794c785384ab51edab2a44 186 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 4 181 40.475 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08330 af223ac0f0794c785384ab51edab2a44 186 Pfam PF00281 Ribosomal protein L5 27 83 7.8E-23 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal PGJ_RS00650 6dd75f60dc18ebd3dd76b98b73737f6a 289 Pfam PF02195 ParB-like nuclease domain 28 117 3.4E-24 T 22-04-2016 IPR003115 ParB/Sulfiredoxin PGJ_RS00650 6dd75f60dc18ebd3dd76b98b73737f6a 289 Gene3D G3DSA:3.90.1530.10 24 123 3.9E-36 T 22-04-2016 PGJ_RS00650 6dd75f60dc18ebd3dd76b98b73737f6a 289 SUPERFAMILY SSF109709 109 217 7.06E-34 T 22-04-2016 PGJ_RS00650 6dd75f60dc18ebd3dd76b98b73737f6a 289 PANTHER PTHR33375 8 285 6.9E-89 T 22-04-2016 PGJ_RS00650 6dd75f60dc18ebd3dd76b98b73737f6a 289 PANTHER PTHR33375:SF1 8 285 6.9E-89 T 22-04-2016 PGJ_RS00650 6dd75f60dc18ebd3dd76b98b73737f6a 289 SUPERFAMILY SSF110849 28 119 1.18E-26 T 22-04-2016 IPR003115 ParB/Sulfiredoxin PGJ_RS00650 6dd75f60dc18ebd3dd76b98b73737f6a 289 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 26 203 1.2E-52 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 PGJ_RS00650 6dd75f60dc18ebd3dd76b98b73737f6a 289 SMART SM00470 27 117 5.9E-31 T 22-04-2016 IPR003115 ParB/Sulfiredoxin PGJ_RS05440 c445189b0acc94cf2e8f7892647f963b 451 SUPERFAMILY SSF53720 2 432 2.75E-63 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PGJ_RS05440 c445189b0acc94cf2e8f7892647f963b 451 PANTHER PTHR11699:SF168 2 450 9.0E-62 T 22-04-2016 PGJ_RS05440 c445189b0acc94cf2e8f7892647f963b 451 Gene3D G3DSA:3.40.605.10 2 225 5.6E-33 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PGJ_RS05440 c445189b0acc94cf2e8f7892647f963b 451 Gene3D G3DSA:3.40.309.10 226 392 4.3E-12 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PGJ_RS05440 c445189b0acc94cf2e8f7892647f963b 451 Pfam PF00171 Aldehyde dehydrogenase family 2 254 1.0E-20 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PGJ_RS05440 c445189b0acc94cf2e8f7892647f963b 451 PANTHER PTHR11699 2 450 9.0E-62 T 22-04-2016 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 Pfam PF13371 Tetratricopeptide repeat 204 273 8.9E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SUPERFAMILY SSF48452 28 227 5.69E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 Pfam PF13181 Tetratricopeptide repeat 94 125 0.0048 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 Pfam PF13432 Tetratricopeptide repeat 620 676 4.5E-8 T 22-04-2016 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 Gene3D G3DSA:1.25.40.10 282 346 6.5E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 Gene3D G3DSA:1.25.40.10 25 281 2.4E-48 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 Gene3D G3DSA:1.25.40.10 602 676 3.4E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 Gene3D G3DSA:1.25.40.10 479 551 3.4E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SUPERFAMILY SSF48452 596 673 4.7E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SUPERFAMILY SSF48452 502 555 4.7E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 PANTHER PTHR23083 497 562 1.1E-65 T 22-04-2016 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 PANTHER PTHR23083 612 676 1.1E-65 T 22-04-2016 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 PANTHER PTHR23083 24 363 1.1E-65 T 22-04-2016 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SUPERFAMILY SSF48452 196 361 1.2E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SMART SM00028 93 126 9.2E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SMART SM00028 59 92 67.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SMART SM00028 498 531 0.0012 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SMART SM00028 616 649 1.9E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SMART SM00028 331 364 170.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SMART SM00028 229 262 23.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SMART SM00028 297 330 0.029 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SMART SM00028 195 228 0.0029 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SMART SM00028 650 683 200.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS09885 edadce1635b31c79ad6eaf281373102b 695 SMART SM00028 263 296 16.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS00080 8942dcd54c7cc96b8e795890021809ca 234 PANTHER PTHR33164 71 207 6.8E-14 T 22-04-2016 PGJ_RS00080 8942dcd54c7cc96b8e795890021809ca 234 Gene3D G3DSA:1.10.10.10 63 193 2.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS00080 8942dcd54c7cc96b8e795890021809ca 234 Pfam PF13463 Winged helix DNA-binding domain 93 156 1.9E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PGJ_RS00080 8942dcd54c7cc96b8e795890021809ca 234 SUPERFAMILY SSF46785 67 200 2.42E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS00080 8942dcd54c7cc96b8e795890021809ca 234 SMART SM00347 82 183 2.2E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PGJ_RS04310 810656435e8099d89395be1fef40a2af 245 PANTHER PTHR10108 16 245 6.4E-63 T 22-04-2016 PGJ_RS04310 810656435e8099d89395be1fef40a2af 245 SUPERFAMILY SSF53335 15 237 1.3E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS04310 810656435e8099d89395be1fef40a2af 245 PANTHER PTHR10108:SF24 16 245 6.4E-63 T 22-04-2016 PGJ_RS04310 810656435e8099d89395be1fef40a2af 245 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 245 7.6E-86 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PGJ_RS04310 810656435e8099d89395be1fef40a2af 245 Gene3D G3DSA:3.40.50.150 18 239 6.1E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS04310 810656435e8099d89395be1fef40a2af 245 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 11 245 33.434 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PGJ_RS04310 810656435e8099d89395be1fef40a2af 245 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 245 2.2E-64 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PGJ_RS02475 791d6fbde5052cce9f828f0376555f9b 385 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 374 8.8E-34 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS02475 791d6fbde5052cce9f828f0376555f9b 385 PANTHER PTHR30525 1 380 1.3E-202 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS02475 791d6fbde5052cce9f828f0376555f9b 385 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 379 44.879 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS02475 791d6fbde5052cce9f828f0376555f9b 385 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 145 227 1.2E-37 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS02475 791d6fbde5052cce9f828f0376555f9b 385 SUPERFAMILY SSF69055 290 382 4.19E-28 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS02475 791d6fbde5052cce9f828f0376555f9b 385 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 376 1.4E-139 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS02475 791d6fbde5052cce9f828f0376555f9b 385 PIRSF PIRSF006205 2 385 1.1E-150 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS02475 791d6fbde5052cce9f828f0376555f9b 385 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 131 5.4E-45 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS02475 791d6fbde5052cce9f828f0376555f9b 385 Gene3D G3DSA:1.10.1740.10 300 381 1.5E-25 T 22-04-2016 PGJ_RS02475 791d6fbde5052cce9f828f0376555f9b 385 Gene3D G3DSA:3.40.50.720 1 149 7.6E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02475 791d6fbde5052cce9f828f0376555f9b 385 SUPERFAMILY SSF55347 125 262 2.03E-57 T 22-04-2016 PGJ_RS02475 791d6fbde5052cce9f828f0376555f9b 385 SUPERFAMILY SSF51735 2 149 2.5E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09695 7161c5734a966007253ba3cd21067348 141 SUPERFAMILY SSF82649 8 135 3.51E-44 T 22-04-2016 PGJ_RS09695 7161c5734a966007253ba3cd21067348 141 Gene3D G3DSA:3.90.1010.10 3 136 4.3E-53 T 22-04-2016 PGJ_RS09695 7161c5734a966007253ba3cd21067348 141 PANTHER PTHR12735:SF11 3 138 1.6E-48 T 22-04-2016 PGJ_RS09695 7161c5734a966007253ba3cd21067348 141 Pfam PF02657 Fe-S metabolism associated domain 12 130 1.3E-46 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 PGJ_RS09695 7161c5734a966007253ba3cd21067348 141 PANTHER PTHR12735 3 138 1.6E-48 T 22-04-2016 PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 PANTHER PTHR11061:SF30 14 143 1.1E-155 T 22-04-2016 PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 19 468 6.3E-103 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 Pfam PF01938 TRAM domain 14 62 2.2E-5 T 22-04-2016 IPR002792 TRAM domain PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 405 436 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 PANTHER PTHR11061:SF30 160 478 1.1E-155 T 22-04-2016 PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 Gene3D G3DSA:2.40.50.140 13 82 8.6E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 285 475 1.2E-15 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 PANTHER PTHR11061 160 478 1.1E-155 T 22-04-2016 PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 PANTHER PTHR11061 14 143 1.1E-155 T 22-04-2016 PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 458 468 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 Gene3D G3DSA:3.40.50.150 268 475 1.9E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 SUPERFAMILY SSF50249 13 69 3.71E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS03640 f6d4dafa2d1550daaa5a90bc907112d0 478 SUPERFAMILY SSF53335 71 475 7.19E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS07175 e2595504debe7c099101c2f38861ff81 195 PANTHER PTHR30466 11 195 5.9E-56 T 22-04-2016 PGJ_RS07175 e2595504debe7c099101c2f38861ff81 195 Pfam PF01613 Flavin reductase like domain 13 171 6.7E-25 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 PGJ_RS07175 e2595504debe7c099101c2f38861ff81 195 Gene3D G3DSA:2.30.110.10 5 175 1.6E-57 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PGJ_RS07175 e2595504debe7c099101c2f38861ff81 195 SMART SM00903 9 157 1.4E-22 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 PGJ_RS07175 e2595504debe7c099101c2f38861ff81 195 SUPERFAMILY SSF50475 7 175 9.32E-47 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PGJ_RS07175 e2595504debe7c099101c2f38861ff81 195 PANTHER PTHR30466:SF6 11 195 5.9E-56 T 22-04-2016 PGJ_RS06615 d2670f7f28da7b772567bbf35747a1e3 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 194 19.919 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 PGJ_RS06615 d2670f7f28da7b772567bbf35747a1e3 202 Pfam PF01121 Dephospho-CoA kinase 3 174 5.1E-32 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 PGJ_RS06615 d2670f7f28da7b772567bbf35747a1e3 202 Gene3D G3DSA:3.40.50.300 1 193 1.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06615 d2670f7f28da7b772567bbf35747a1e3 202 PANTHER PTHR10695 1 157 3.7E-28 T 22-04-2016 PGJ_RS06615 d2670f7f28da7b772567bbf35747a1e3 202 SUPERFAMILY SSF52540 2 192 9.04E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06615 d2670f7f28da7b772567bbf35747a1e3 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 165 3.5E-27 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 PGJ_RS01740 2fca863a42e1eb7060110ee9f9b2a0c2 682 SUPERFAMILY SSF52833 504 678 1.04E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS01740 2fca863a42e1eb7060110ee9f9b2a0c2 682 Gene3D G3DSA:2.60.40.1250 48 161 2.4E-4 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PGJ_RS01740 2fca863a42e1eb7060110ee9f9b2a0c2 682 PANTHER PTHR32234 15 603 4.1E-136 T 22-04-2016 PGJ_RS01740 2fca863a42e1eb7060110ee9f9b2a0c2 682 PANTHER PTHR32234:SF0 15 603 4.1E-136 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PGJ_RS01740 2fca863a42e1eb7060110ee9f9b2a0c2 682 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 235 428 2.8E-14 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PGJ_RS01740 2fca863a42e1eb7060110ee9f9b2a0c2 682 Pfam PF11412 Disulphide bond corrector protein DsbC 46 158 6.3E-11 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PGJ_RS01740 2fca863a42e1eb7060110ee9f9b2a0c2 682 Gene3D G3DSA:3.40.30.10 540 679 2.3E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS01740 2fca863a42e1eb7060110ee9f9b2a0c2 682 Pfam PF13899 Thioredoxin-like 543 604 6.7E-12 T 22-04-2016 PGJ_RS00320 9aeffad6f01e6261f26c9204a4e716aa 388 SUPERFAMILY SSF56042 174 378 2.39E-32 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS00320 9aeffad6f01e6261f26c9204a4e716aa 388 Gene3D G3DSA:3.90.650.10 174 378 3.3E-42 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS00320 9aeffad6f01e6261f26c9204a4e716aa 388 PANTHER PTHR10520 34 234 3.9E-47 T 22-04-2016 PGJ_RS00320 9aeffad6f01e6261f26c9204a4e716aa 388 PANTHER PTHR10520 250 378 3.9E-47 T 22-04-2016 PGJ_RS00320 9aeffad6f01e6261f26c9204a4e716aa 388 Pfam PF02769 AIR synthase related protein, C-terminal domain 179 378 4.7E-9 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS00320 9aeffad6f01e6261f26c9204a4e716aa 388 SUPERFAMILY SSF55326 27 165 1.1E-9 T 22-04-2016 PGJ_RS00320 9aeffad6f01e6261f26c9204a4e716aa 388 Gene3D G3DSA:3.30.1330.10 32 173 3.4E-12 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PGJ_RS05425 0b5a81d1b583c7613af3143800b2cd0b 94 Pfam PF01106 NifU-like domain 6 67 3.1E-18 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 PGJ_RS05425 0b5a81d1b583c7613af3143800b2cd0b 94 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 12 73 3.0E-31 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 PGJ_RS05425 0b5a81d1b583c7613af3143800b2cd0b 94 SUPERFAMILY SSF117916 4 67 9.37E-18 T 22-04-2016 PGJ_RS05425 0b5a81d1b583c7613af3143800b2cd0b 94 Gene3D G3DSA:3.40.30.10 18 79 7.6E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 SUPERFAMILY SSF52540 119 238 1.26E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 Pfam PF16326 ABC transporter C-terminal domain 556 621 1.5E-14 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 Pfam PF12848 ABC transporter 216 295 3.7E-12 T 22-04-2016 IPR032781 ABC-transporter extension domain PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 PANTHER PTHR19211 7 571 3.8E-186 T 22-04-2016 PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 Gene3D G3DSA:3.40.50.300 3 260 9.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 Gene3D G3DSA:3.40.50.300 308 540 3.3E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 Pfam PF00005 ABC transporter 18 177 6.7E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 Pfam PF00005 ABC transporter 329 461 7.1E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 SMART SM00382 26 221 2.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 SMART SM00382 334 512 1.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 SUPERFAMILY SSF52540 3 92 1.26E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS03090 ac19ee72c3918c09bbb065ab1cad2d14 623 SUPERFAMILY SSF52540 298 510 4.12E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06355 b910ca52b738068b34506258373ce3be 282 Pfam PF04294 VanW like protein 74 207 4.5E-40 T 22-04-2016 IPR007391 Vancomycin resistance VanW PGJ_RS06355 b910ca52b738068b34506258373ce3be 282 PANTHER PTHR35788:SF2 53 269 6.3E-83 T 22-04-2016 PGJ_RS06355 b910ca52b738068b34506258373ce3be 282 PANTHER PTHR35788 53 269 6.3E-83 T 22-04-2016 PGJ_RS05925 f3ce744ccc6ddef80906e03de70db2a1 181 PANTHER PTHR11019:SF4 1 175 3.9E-43 T 22-04-2016 PGJ_RS05925 f3ce744ccc6ddef80906e03de70db2a1 181 PANTHER PTHR11019 1 175 3.9E-43 T 22-04-2016 PGJ_RS05925 f3ce744ccc6ddef80906e03de70db2a1 181 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 176 4.3E-61 T 22-04-2016 IPR006287 DJ-1 PGJ_RS05925 f3ce744ccc6ddef80906e03de70db2a1 181 SUPERFAMILY SSF52317 3 177 7.69E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS05925 f3ce744ccc6ddef80906e03de70db2a1 181 Pfam PF01965 DJ-1/PfpI family 3 162 7.3E-34 T 22-04-2016 IPR002818 DJ-1/PfpI PGJ_RS05925 f3ce744ccc6ddef80906e03de70db2a1 181 Gene3D G3DSA:3.40.50.880 1 179 3.8E-51 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 236 252 2.4E-11 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 298 310 2.4E-11 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 73 92 2.4E-11 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 162 178 2.4E-11 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 195 212 2.4E-11 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 PANTHER PTHR13697 370 545 2.7E-218 T 22-04-2016 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 PANTHER PTHR13697 3 320 2.7E-218 T 22-04-2016 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 PIRSF PIRSF005677 1 549 7.1E-234 T 22-04-2016 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 UniPathway: UPA00109 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 Hamap MF_01980 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 2 548 44.975 T 22-04-2016 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 UniPathway: UPA00109 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 PANTHER PTHR13697:SF2 370 545 2.7E-218 T 22-04-2016 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 PANTHER PTHR13697:SF2 3 320 2.7E-218 T 22-04-2016 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 Gene3D G3DSA:1.10.10.480 315 385 8.0E-28 T 22-04-2016 IPR013981 Pyrophosphate-dependent phosphofructokinase, alpha-helical domain UniPathway: UPA00109 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 Pfam PF00365 Phosphofructokinase 71 368 2.1E-36 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 SUPERFAMILY SSF53784 6 544 1.11E-160 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 TIGRFAM TIGR02477 PFKA_PPi: diphosphate--fructose-6-phosphate 1-phosphotransferase 7 546 1.9E-245 T 22-04-2016 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 UniPathway: UPA00109 PGJ_RS00750 2e5245e33e0fd161d5a70979f78647ca 549 Gene3D G3DSA:3.40.50.450 8 289 4.1E-92 T 22-04-2016 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 SUPERFAMILY SSF55831 1 264 4.58E-128 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 PANTHER PTHR11548 1 264 7.3E-183 T 22-04-2016 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 5.2E-41 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 2.9E-86 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 Gene3D G3DSA:3.30.572.10 1 264 5.9E-132 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 4.1E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 4.1E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 4.1E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 4.1E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 4.1E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 Pfam PF00303 Thymidylate synthase 2 264 6.1E-121 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PGJ_RS09220 55fd040e03370d7995dd21799a7a9cda 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 45.352 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 Pfam PF00581 Rhodanese-like domain 365 453 5.4E-7 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 Pfam PF00581 Rhodanese-like domain 259 352 1.8E-5 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 Gene3D G3DSA:3.60.15.10 4 220 1.3E-52 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 SMART SM00450 258 356 1.9 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 SMART SM00450 363 458 2.1E-13 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 SMART SM00849 12 182 9.9E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 Pfam PF00753 Metallo-beta-lactamase superfamily 15 149 6.6E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 SUPERFAMILY SSF56281 1 241 8.4E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 PANTHER PTHR11935 3 296 3.0E-85 T 22-04-2016 PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 SUPERFAMILY SSF52821 358 462 2.75E-22 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 Gene3D G3DSA:3.40.250.10 363 465 2.1E-19 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 Gene3D G3DSA:3.40.250.10 236 362 2.2E-14 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 SUPERFAMILY SSF52821 244 357 1.14E-14 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS02035 b209fc61acd3cbd38f5dad372b099314 471 PANTHER PTHR11935:SF9 3 296 3.0E-85 T 22-04-2016 PGJ_RS02970 790d5e6b88ee2dc3b85608f5e48711a9 411 Pfam PF02687 FtsX-like permease family 279 404 1.2E-8 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS02970 790d5e6b88ee2dc3b85608f5e48711a9 411 Pfam PF12704 MacB-like periplasmic core domain 28 203 3.7E-10 T 22-04-2016 IPR025857 MacB-like periplasmic core domain PGJ_RS02970 790d5e6b88ee2dc3b85608f5e48711a9 411 PANTHER PTHR30489 25 411 1.2E-40 T 22-04-2016 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 443 2.3E-15 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 PRINTS PR01183 Ribonucleotide reductase large chain signature 478 505 2.3E-15 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 PRINTS PR01183 Ribonucleotide reductase large chain signature 181 200 2.3E-15 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 PRINTS PR01183 Ribonucleotide reductase large chain signature 392 414 2.3E-15 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 PANTHER PTHR11573:SF3 22 365 4.1E-251 T 22-04-2016 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 PANTHER PTHR11573:SF3 538 850 4.1E-251 T 22-04-2016 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 PANTHER PTHR11573:SF3 390 518 4.1E-251 T 22-04-2016 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 Pfam PF02867 Ribonucleotide reductase, barrel domain 104 636 5.0E-134 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 22 85 1.5E-6 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 SUPERFAMILY SSF51998 478 658 1.89E-127 T 22-04-2016 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 SUPERFAMILY SSF51998 22 223 1.89E-127 T 22-04-2016 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 SUPERFAMILY SSF51998 254 440 1.89E-127 T 22-04-2016 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 26 645 3.6E-186 T 22-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 Gene3D G3DSA:3.20.70.20 20 440 8.8E-113 T 22-04-2016 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 Gene3D G3DSA:3.20.70.20 595 642 8.8E-113 T 22-04-2016 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 Gene3D G3DSA:3.20.70.20 478 523 8.8E-113 T 22-04-2016 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 PANTHER PTHR11573 22 365 4.1E-251 T 22-04-2016 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 PANTHER PTHR11573 538 850 4.1E-251 T 22-04-2016 PGJ_RS03780 d084bfcec305edfcbc959e8002128fa1 850 PANTHER PTHR11573 390 518 4.1E-251 T 22-04-2016 PGJ_RS04080 e74c03b8d27cfe7175703ea578eb5b50 575 PANTHER PTHR30443 20 553 1.7E-56 T 22-04-2016 PGJ_RS04080 e74c03b8d27cfe7175703ea578eb5b50 575 Pfam PF00884 Sulfatase 262 513 3.2E-29 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PGJ_RS04080 e74c03b8d27cfe7175703ea578eb5b50 575 SUPERFAMILY SSF53649 262 554 8.18E-28 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PGJ_RS04080 e74c03b8d27cfe7175703ea578eb5b50 575 Gene3D G3DSA:3.40.720.10 263 507 1.5E-15 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PGJ_RS00070 b309a8bb40c39f4a3df7ad9c470c8888 445 PANTHER PTHR24423 89 445 8.9E-49 T 22-04-2016 PGJ_RS00070 b309a8bb40c39f4a3df7ad9c470c8888 445 PANTHER PTHR24423 17 24 8.9E-49 T 22-04-2016 PGJ_RS00070 b309a8bb40c39f4a3df7ad9c470c8888 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 445 3.1E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS00070 b309a8bb40c39f4a3df7ad9c470c8888 445 Gene3D G3DSA:3.30.565.10 291 445 7.5E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS00070 b309a8bb40c39f4a3df7ad9c470c8888 445 SUPERFAMILY SSF55874 282 445 1.83E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS00070 b309a8bb40c39f4a3df7ad9c470c8888 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 5.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS00070 b309a8bb40c39f4a3df7ad9c470c8888 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 5.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS00070 b309a8bb40c39f4a3df7ad9c470c8888 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 5.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS00070 b309a8bb40c39f4a3df7ad9c470c8888 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 5.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS00070 b309a8bb40c39f4a3df7ad9c470c8888 445 PANTHER PTHR24423:SF450 89 445 8.9E-49 T 22-04-2016 PGJ_RS00070 b309a8bb40c39f4a3df7ad9c470c8888 445 PANTHER PTHR24423:SF450 17 24 8.9E-49 T 22-04-2016 PGJ_RS00070 b309a8bb40c39f4a3df7ad9c470c8888 445 SMART SM00387 332 445 2.1E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 PRINTS PR00133 Glycosyl hydrolase family 3 signature 224 240 4.6E-9 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 PRINTS PR00133 Glycosyl hydrolase family 3 signature 302 320 4.6E-9 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 PRINTS PR00133 Glycosyl hydrolase family 3 signature 146 165 4.6E-9 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 PRINTS PR00133 Glycosyl hydrolase family 3 signature 121 137 4.6E-9 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 SUPERFAMILY SSF56601 776 998 8.88E-70 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 SUPERFAMILY SSF56601 595 708 8.88E-70 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 302 319 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 PANTHER PTHR30480 49 438 1.4E-107 T 22-04-2016 PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 65 378 2.6E-80 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 SUPERFAMILY SSF51445 50 407 2.84E-90 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 Gene3D G3DSA:3.40.710.10 776 996 8.6E-78 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 Gene3D G3DSA:3.40.710.10 596 722 8.6E-78 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 Gene3D G3DSA:3.40.50.1700 407 541 1.4E-5 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 PANTHER PTHR30480:SF5 49 438 1.4E-107 T 22-04-2016 PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 Pfam PF00144 Beta-lactamase 597 708 4.0E-20 T 22-04-2016 IPR001466 Beta-lactamase-related PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 Pfam PF00144 Beta-lactamase 785 976 1.5E-25 T 22-04-2016 IPR001466 Beta-lactamase-related PGJ_RS00050 8b1070b8621544ff4b5ebbf4466103e8 1003 Gene3D G3DSA:3.20.20.300 87 389 9.8E-90 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PGJ_RS03670 a630d6b6ea8dbb6ca9d0eda075d00b74 274 Pfam PF01380 SIS domain 127 205 9.6E-9 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PGJ_RS03670 a630d6b6ea8dbb6ca9d0eda075d00b74 274 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 14 257 3.5E-91 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 PGJ_RS03670 a630d6b6ea8dbb6ca9d0eda075d00b74 274 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 182 199 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 PGJ_RS03670 a630d6b6ea8dbb6ca9d0eda075d00b74 274 PANTHER PTHR10088 1 263 4.1E-109 T 22-04-2016 PGJ_RS03670 a630d6b6ea8dbb6ca9d0eda075d00b74 274 SUPERFAMILY SSF53697 12 244 1.8E-65 T 22-04-2016 PGJ_RS03670 a630d6b6ea8dbb6ca9d0eda075d00b74 274 Gene3D G3DSA:3.40.50.10490 9 245 5.3E-80 T 22-04-2016 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 363 797 9.3E-161 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 Pfam PF14579 Helix-hairpin-helix motif 871 959 7.6E-28 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 PANTHER PTHR32294 102 1228 0.0 T 22-04-2016 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 PANTHER PTHR32294 1 53 0.0 T 22-04-2016 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 PANTHER PTHR32294:SF0 102 1228 0.0 T 22-04-2016 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 PANTHER PTHR32294:SF0 1 53 0.0 T 22-04-2016 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 SUPERFAMILY SSF89550 4 48 1.41E-32 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 SUPERFAMILY SSF89550 89 334 1.41E-32 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 SMART SM00481 5 120 8.3E-21 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 Pfam PF02811 PHP domain 92 235 3.8E-30 T 22-04-2016 IPR004013 PHP domain GO:0003824 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 Pfam PF02811 PHP domain 6 59 7.5E-16 T 22-04-2016 IPR004013 PHP domain GO:0003824 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 Gene3D G3DSA:3.20.20.140 4 60 2.5E-52 T 22-04-2016 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 Gene3D G3DSA:3.20.20.140 109 326 2.5E-52 T 22-04-2016 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 Gene3D G3DSA:1.10.150.280 887 941 1.5E-5 T 22-04-2016 PGJ_RS00160 de2afe52672ae8516c926a52fdfbe2ed 1228 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 102 1102 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 SMART SM00493 261 332 4.5E-16 T 22-04-2016 IPR006171 Toprim domain PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 Pfam PF08275 DNA primase catalytic core, N-terminal domain 124 253 2.0E-35 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 PANTHER PTHR30313 1 649 1.1E-122 T 22-04-2016 PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 Gene3D G3DSA:3.40.1360.10 243 364 3.2E-44 T 22-04-2016 PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 Gene3D G3DSA:3.90.980.10 113 242 1.6E-34 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 Hamap MF_00974 DNA primase [dnaG]. 1 650 25.702 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 SUPERFAMILY SSF56731 113 422 4.71E-89 T 22-04-2016 PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 PIRSF PIRSF002811 1 660 1.5E-143 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 Pfam PF01807 CHC2 zinc finger 8 97 4.9E-31 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 SMART SM00400 33 87 3.0E-29 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 SUPERFAMILY SSF57783 3 98 8.33E-31 T 22-04-2016 PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 TIGRFAM TIGR01391 dnaG: DNA primase 1 417 6.5E-143 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 Gene3D G3DSA:3.90.580.10 2 98 3.2E-34 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PGJ_RS07870 b06f797a4e4f08f67bcdbabab2cd9039 673 Pfam PF13155 Toprim-like 264 348 1.8E-18 T 22-04-2016 PGJ_RS04110 5a93cf4b90d4426efce6090b1cc34cad 248 Pfam PF02405 Permease MlaE 34 244 1.5E-64 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PGJ_RS04110 5a93cf4b90d4426efce6090b1cc34cad 248 PANTHER PTHR30188 6 246 1.5E-73 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PGJ_RS06760 370467a93bc7ac10b43b157fbcfb057c 235 PANTHER PTHR10953 6 234 7.0E-71 T 22-04-2016 PGJ_RS06760 370467a93bc7ac10b43b157fbcfb057c 235 Pfam PF00899 ThiF family 9 219 3.5E-58 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PGJ_RS06760 370467a93bc7ac10b43b157fbcfb057c 235 SUPERFAMILY SSF69572 7 233 2.09E-72 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PGJ_RS06760 370467a93bc7ac10b43b157fbcfb057c 235 Gene3D G3DSA:3.40.50.720 6 234 5.1E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 PANTHER PTHR11606 1 444 6.9E-217 T 22-04-2016 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 SMART SM00839 200 443 7.9E-72 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 198 443 4.8E-78 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 PIRSF PIRSF000185 18 445 6.6E-116 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 Gene3D G3DSA:3.40.192.10 64 184 1.1E-61 T 22-04-2016 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 SUPERFAMILY SSF51735 198 444 6.86E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 118 131 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 SUPERFAMILY SSF53223 4 192 6.08E-72 T 22-04-2016 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 Gene3D G3DSA:1.10.285.10 371 444 7.0E-24 T 22-04-2016 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 Gene3D G3DSA:1.10.285.10 4 63 7.4E-23 T 22-04-2016 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 53 181 8.0E-51 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 110 124 2.5E-28 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 189 211 2.5E-28 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 370 381 2.5E-28 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 231 251 2.5E-28 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 Gene3D G3DSA:3.40.50.720 205 370 1.6E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03060 df4c815de0d6f4acee97a8125de1cdf8 445 PANTHER PTHR11606:SF4 1 444 6.9E-217 T 22-04-2016 PGJ_RS05335 35ee5b5792a3eb02b3db0b6192097496 195 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 103 191 1.3E-25 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PGJ_RS05335 35ee5b5792a3eb02b3db0b6192097496 195 Gene3D G3DSA:1.10.287.460 2 79 1.6E-23 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PGJ_RS05335 35ee5b5792a3eb02b3db0b6192097496 195 PANTHER PTHR10516 12 35 4.9E-58 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PGJ_RS05335 35ee5b5792a3eb02b3db0b6192097496 195 PANTHER PTHR10516 74 194 4.9E-58 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PGJ_RS05335 35ee5b5792a3eb02b3db0b6192097496 195 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 96 4.0E-22 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PGJ_RS05335 35ee5b5792a3eb02b3db0b6192097496 195 SUPERFAMILY SSF54534 2 193 3.14E-57 T 22-04-2016 PGJ_RS05335 35ee5b5792a3eb02b3db0b6192097496 195 Gene3D G3DSA:3.10.50.40 80 194 1.5E-43 T 22-04-2016 PGJ_RS05335 35ee5b5792a3eb02b3db0b6192097496 195 PANTHER PTHR10516:SF320 12 35 4.9E-58 T 22-04-2016 PGJ_RS05335 35ee5b5792a3eb02b3db0b6192097496 195 PANTHER PTHR10516:SF320 74 194 4.9E-58 T 22-04-2016 PGJ_RS04665 96eeb235900d9dd01d2b1ead4b5621cb 564 Gene3D G3DSA:2.60.40.1180 479 536 1.9E-4 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta PGJ_RS04665 96eeb235900d9dd01d2b1ead4b5621cb 564 Pfam PF00128 Alpha amylase, catalytic domain 46 396 2.5E-18 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PGJ_RS04665 96eeb235900d9dd01d2b1ead4b5621cb 564 Gene3D G3DSA:3.20.20.80 5 450 3.7E-65 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS04665 96eeb235900d9dd01d2b1ead4b5621cb 564 SUPERFAMILY SSF51445 5 447 1.02E-69 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS04665 96eeb235900d9dd01d2b1ead4b5621cb 564 PANTHER PTHR10357 215 511 6.7E-138 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PGJ_RS04665 96eeb235900d9dd01d2b1ead4b5621cb 564 PANTHER PTHR10357 5 177 6.7E-138 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PGJ_RS04665 96eeb235900d9dd01d2b1ead4b5621cb 564 SMART SM00642 11 428 7.1E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PGJ_RS04665 96eeb235900d9dd01d2b1ead4b5621cb 564 PANTHER PTHR10357:SF126 215 511 6.7E-138 T 22-04-2016 PGJ_RS04665 96eeb235900d9dd01d2b1ead4b5621cb 564 PANTHER PTHR10357:SF126 5 177 6.7E-138 T 22-04-2016 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 Gene3D G3DSA:3.30.930.10 242 536 4.7E-110 T 22-04-2016 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 Gene3D G3DSA:3.40.50.800 539 643 6.9E-33 T 22-04-2016 IPR004154 Anticodon-binding PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 PANTHER PTHR11451:SF5 1 643 1.3E-304 T 22-04-2016 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 219 1.3E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 Gene3D G3DSA:3.10.20.30 1 64 1.9E-22 T 22-04-2016 IPR012675 Beta-grasp domain PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 Gene3D G3DSA:3.30.54.20 133 187 3.5E-19 T 22-04-2016 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 SUPERFAMILY SSF55681 243 534 1.6E-92 T 22-04-2016 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 SUPERFAMILY SSF55186 63 241 3.01E-60 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 PRINTS PR01047 Threonyl-tRNA synthetase signature 542 554 1.7E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 1.7E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 PRINTS PR01047 Threonyl-tRNA synthetase signature 472 500 1.7E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 1.7E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 PRINTS PR01047 Threonyl-tRNA synthetase signature 515 528 1.7E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 SUPERFAMILY SSF52954 538 646 9.06E-30 T 22-04-2016 IPR004154 Anticodon-binding PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 PANTHER PTHR11451 1 643 1.3E-304 T 22-04-2016 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 Pfam PF02824 TGS domain 2 61 2.0E-10 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 642 34.23 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 SUPERFAMILY SSF81271 2 61 7.41E-16 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 Gene3D G3DSA:3.30.980.10 188 224 7.0E-38 T 22-04-2016 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 Gene3D G3DSA:3.30.980.10 66 131 7.0E-38 T 22-04-2016 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 SMART SM00863 170 219 1.0E-24 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 Pfam PF03129 Anticodon binding domain 549 638 2.3E-21 T 22-04-2016 IPR004154 Anticodon-binding PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 639 7.0E-218 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PGJ_RS04250 4bdf345309ab2b5ca20da1e8386f4464 653 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 327 536 1.0E-40 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS04320 c25b961c71f20c855584050cf24f10b2 328 SUPERFAMILY SSF52540 104 285 2.22E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04320 c25b961c71f20c855584050cf24f10b2 328 PANTHER PTHR30473:SF1 5 320 6.3E-131 T 22-04-2016 PGJ_RS04320 c25b961c71f20c855584050cf24f10b2 328 Pfam PF02562 PhoH-like protein 105 308 1.1E-88 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 PGJ_RS04320 c25b961c71f20c855584050cf24f10b2 328 Gene3D G3DSA:3.40.50.300 104 307 1.1E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04320 c25b961c71f20c855584050cf24f10b2 328 PANTHER PTHR30473 5 320 6.3E-131 T 22-04-2016 PGJ_RS03425 d3f84381a884c1e91b19c9b1fa0608cf 268 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 47 241 4.4E-15 T 22-04-2016 IPR001087 GDSL lipase/esterase GO:0016788 PGJ_RS03425 d3f84381a884c1e91b19c9b1fa0608cf 268 SUPERFAMILY SSF52266 45 253 2.14E-27 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain PGJ_RS03425 d3f84381a884c1e91b19c9b1fa0608cf 268 Gene3D G3DSA:3.40.50.1110 45 252 2.0E-26 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain PGJ_RS08710 26d8f70019c1df9c10d393eb23c8d6d4 643 Gene3D G3DSA:3.40.720.10 299 570 4.5E-33 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PGJ_RS08710 26d8f70019c1df9c10d393eb23c8d6d4 643 PANTHER PTHR10342:SF236 286 592 1.6E-44 T 22-04-2016 PGJ_RS08710 26d8f70019c1df9c10d393eb23c8d6d4 643 PANTHER PTHR10342 286 592 1.6E-44 T 22-04-2016 PGJ_RS08710 26d8f70019c1df9c10d393eb23c8d6d4 643 Pfam PF00884 Sulfatase 299 566 3.1E-29 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PGJ_RS08710 26d8f70019c1df9c10d393eb23c8d6d4 643 PIRSF PIRSF005091 28 613 1.1E-66 T 22-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 PGJ_RS08710 26d8f70019c1df9c10d393eb23c8d6d4 643 SUPERFAMILY SSF53649 297 595 6.54E-53 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PGJ_RS07610 9ab01c9b390b06b11ec12567261dcab3 418 PIRSF PIRSF000447 1 418 4.3E-170 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 PGJ_RS07610 9ab01c9b390b06b11ec12567261dcab3 418 SUPERFAMILY SSF53901 4 252 1.33E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PGJ_RS07610 9ab01c9b390b06b11ec12567261dcab3 418 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 368 5.2E-37 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PGJ_RS07610 9ab01c9b390b06b11ec12567261dcab3 418 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site PGJ_RS07610 9ab01c9b390b06b11ec12567261dcab3 418 SUPERFAMILY SSF53901 215 416 5.92E-70 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PGJ_RS07610 9ab01c9b390b06b11ec12567261dcab3 418 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.0E-57 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PGJ_RS07610 9ab01c9b390b06b11ec12567261dcab3 418 SMART SM00825 Beta-ketoacyl synthase 6 418 5.2E-19 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PGJ_RS07610 9ab01c9b390b06b11ec12567261dcab3 418 PANTHER PTHR11712 4 417 3.0E-197 T 22-04-2016 PGJ_RS07610 9ab01c9b390b06b11ec12567261dcab3 418 Gene3D G3DSA:3.40.47.10 264 417 3.5E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PGJ_RS07610 9ab01c9b390b06b11ec12567261dcab3 418 Gene3D G3DSA:3.40.47.10 4 260 3.3E-77 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PGJ_RS07610 9ab01c9b390b06b11ec12567261dcab3 418 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 414 2.1E-183 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 SUPERFAMILY SSF50447 164 287 6.63E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 Pfam PF03144 Elongation factor Tu domain 2 205 274 5.2E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 PANTHER PTHR23115 396 595 3.8E-280 T 22-04-2016 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 PANTHER PTHR23115 2 372 3.8E-280 T 22-04-2016 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 SUPERFAMILY SSF52540 2 198 1.72E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 Pfam PF00679 Elongation factor G C-terminus 398 485 1.1E-17 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 PRINTS PR00315 GTP-binding elongation factor signature 73 83 6.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 PRINTS PR00315 GTP-binding elongation factor signature 6 19 6.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 PRINTS PR00315 GTP-binding elongation factor signature 89 100 6.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 PRINTS PR00315 GTP-binding elongation factor signature 125 134 6.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 PRINTS PR00315 GTP-binding elongation factor signature 49 57 6.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 TIGRFAM TIGR01393 lepA: elongation factor 4 2 595 0.0 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 SUPERFAMILY SSF54980 398 493 7.19E-21 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 173 1.2E-19 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 PANTHER PTHR23115:SF175 396 595 3.8E-280 T 22-04-2016 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 PANTHER PTHR23115:SF175 2 372 3.8E-280 T 22-04-2016 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 Gene3D G3DSA:3.30.70.870 290 367 5.5E-26 T 22-04-2016 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 Gene3D G3DSA:3.30.70.240 400 489 6.9E-18 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 Pfam PF00009 Elongation factor Tu GTP binding domain 2 180 4.8E-54 T 22-04-2016 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 6.2E-51 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 Gene3D G3DSA:3.40.50.300 2 191 4.2E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 SUPERFAMILY SSF54980 291 369 2.37E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 Gene3D G3DSA:2.40.30.10 192 289 8.9E-23 T 22-04-2016 PGJ_RS03020 b20ae3c760215fb407bd8f08f1e66eed 595 Hamap MF_00071 Elongation factor 4 [lepA]. 1 595 284.28 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 PGJ_RS03610 2a4f2c2cc4c790f0d0d9448596897b6f 311 Gene3D G3DSA:3.80.30.20 27 239 3.5E-26 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PGJ_RS03610 2a4f2c2cc4c790f0d0d9448596897b6f 311 Pfam PF04055 Radical SAM superfamily 46 208 1.8E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS03610 2a4f2c2cc4c790f0d0d9448596897b6f 311 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 9 309 5.3E-86 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 PGJ_RS03610 2a4f2c2cc4c790f0d0d9448596897b6f 311 SUPERFAMILY SSF102114 21 298 2.75E-40 T 22-04-2016 PGJ_RS03610 2a4f2c2cc4c790f0d0d9448596897b6f 311 Pfam PF16199 Radical_SAM C-terminal domain 215 299 1.9E-22 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension PGJ_RS03610 2a4f2c2cc4c790f0d0d9448596897b6f 311 PANTHER PTHR11135 1 308 1.0E-112 T 22-04-2016 PGJ_RS03610 2a4f2c2cc4c790f0d0d9448596897b6f 311 PANTHER PTHR11135:SF1 1 308 1.0E-112 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 PGJ_RS03610 2a4f2c2cc4c790f0d0d9448596897b6f 311 SMART SM00729 26 255 3.1E-26 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PGJ_RS08555 435204f41b7647ef8018002921774e04 354 SUPERFAMILY SSF82689 231 327 4.84E-29 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PGJ_RS08555 435204f41b7647ef8018002921774e04 354 Pfam PF00924 Mechanosensitive ion channel 124 319 3.6E-49 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PGJ_RS08555 435204f41b7647ef8018002921774e04 354 PANTHER PTHR30221 76 327 4.7E-72 T 22-04-2016 PGJ_RS08555 435204f41b7647ef8018002921774e04 354 PANTHER PTHR30221:SF7 76 327 4.7E-72 T 22-04-2016 PGJ_RS08555 435204f41b7647ef8018002921774e04 354 Gene3D G3DSA:2.30.30.60 180 229 2.2E-16 T 22-04-2016 PGJ_RS08555 435204f41b7647ef8018002921774e04 354 SUPERFAMILY SSF50182 165 230 9.15E-17 T 22-04-2016 IPR010920 LSM domain PGJ_RS08555 435204f41b7647ef8018002921774e04 354 Gene3D G3DSA:3.30.70.100 234 317 1.8E-25 T 22-04-2016 PGJ_RS08555 435204f41b7647ef8018002921774e04 354 SUPERFAMILY SSF82861 79 162 1.96E-12 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PGJ_RS00555 e7f4011e877b320b35bc7fbdf9054084 300 Pfam PF13612 Transposase DDE domain 108 263 8.7E-77 T 22-04-2016 IPR025668 Transposase DDE domain PGJ_RS02395 e7f4011e877b320b35bc7fbdf9054084 300 Pfam PF13612 Transposase DDE domain 108 263 8.7E-77 T 22-04-2016 IPR025668 Transposase DDE domain PGJ_RS08000 e7f4011e877b320b35bc7fbdf9054084 300 Pfam PF13612 Transposase DDE domain 108 263 8.7E-77 T 22-04-2016 IPR025668 Transposase DDE domain PGJ_RS03415 e7f4011e877b320b35bc7fbdf9054084 300 Pfam PF13612 Transposase DDE domain 108 263 8.7E-77 T 22-04-2016 IPR025668 Transposase DDE domain PGJ_RS07735 e7f4011e877b320b35bc7fbdf9054084 300 Pfam PF13612 Transposase DDE domain 108 263 8.7E-77 T 22-04-2016 IPR025668 Transposase DDE domain PGJ_RS09630 e7f4011e877b320b35bc7fbdf9054084 300 Pfam PF13612 Transposase DDE domain 108 263 8.7E-77 T 22-04-2016 IPR025668 Transposase DDE domain PGJ_RS08500 e7f4011e877b320b35bc7fbdf9054084 300 Pfam PF13612 Transposase DDE domain 108 263 8.7E-77 T 22-04-2016 IPR025668 Transposase DDE domain PGJ_RS02920 e7f4011e877b320b35bc7fbdf9054084 300 Pfam PF13612 Transposase DDE domain 108 263 8.7E-77 T 22-04-2016 IPR025668 Transposase DDE domain PGJ_RS08280 498f25c1a85d1b15ab0b8a1b7dee3b3c 72 SUPERFAMILY SSF50249 1 71 5.9E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS08280 498f25c1a85d1b15ab0b8a1b7dee3b3c 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.2E-26 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 PGJ_RS08280 498f25c1a85d1b15ab0b8a1b7dee3b3c 72 Gene3D G3DSA:2.40.50.140 1 72 4.0E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS08280 498f25c1a85d1b15ab0b8a1b7dee3b3c 72 SMART SM00316 3 72 0.0038 T 22-04-2016 IPR022967 RNA-binding domain, S1 PGJ_RS08280 498f25c1a85d1b15ab0b8a1b7dee3b3c 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.236 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PGJ_RS08280 498f25c1a85d1b15ab0b8a1b7dee3b3c 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 2.6E-36 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PGJ_RS08280 498f25c1a85d1b15ab0b8a1b7dee3b3c 72 PANTHER PTHR33370 1 72 2.3E-44 T 22-04-2016 PGJ_RS06395 7da8ba6df5a31eacc6e475b123f55ec7 302 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 1 296 22.266 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PGJ_RS06395 7da8ba6df5a31eacc6e475b123f55ec7 302 Pfam PF01715 IPP transferase 34 272 2.0E-57 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PGJ_RS06395 7da8ba6df5a31eacc6e475b123f55ec7 302 SUPERFAMILY SSF52540 1 129 1.39E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06395 7da8ba6df5a31eacc6e475b123f55ec7 302 SUPERFAMILY SSF52540 1 33 1.33E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06395 7da8ba6df5a31eacc6e475b123f55ec7 302 SUPERFAMILY SSF52540 136 224 1.33E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06395 7da8ba6df5a31eacc6e475b123f55ec7 302 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 2 283 5.8E-52 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PGJ_RS06395 7da8ba6df5a31eacc6e475b123f55ec7 302 Gene3D G3DSA:3.40.50.300 2 164 4.1E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06395 7da8ba6df5a31eacc6e475b123f55ec7 302 Gene3D G3DSA:1.10.287.890 190 271 8.6E-20 T 22-04-2016 PGJ_RS06395 7da8ba6df5a31eacc6e475b123f55ec7 302 PANTHER PTHR11088 1 283 1.7E-52 T 22-04-2016 PGJ_RS03685 4d0d1300f038e89ad7211eefc07cf782 152 SUPERFAMILY SSF47729 38 92 4.56E-6 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 SUPERFAMILY SSF54211 633 808 3.22E-51 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 TIGRFAM TIGR00763 lon: endopeptidase La 46 809 9.7E-276 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 SMART SM00464 44 240 5.4E-38 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 PANTHER PTHR10046 36 814 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 44 239 1.5E-33 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 607 810 1.7E-83 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 389 524 9.4E-22 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 SUPERFAMILY SSF52540 346 626 2.03E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 SUPERFAMILY SSF88697 44 238 1.27E-35 T 22-04-2016 IPR015947 PUA-like domain PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 714 722 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 711 730 4.2E-52 T 22-04-2016 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 741 760 4.2E-52 T 22-04-2016 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 393 412 4.2E-52 T 22-04-2016 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 632 648 4.2E-52 T 22-04-2016 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 764 782 4.2E-52 T 22-04-2016 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 Gene3D G3DSA:1.10.8.60 529 621 8.0E-28 T 22-04-2016 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 PIRSF PIRSF001174 33 813 1.7E-283 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 PANTHER PTHR10046:SF24 36 814 0.0 T 22-04-2016 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 Gene3D G3DSA:3.30.230.10 631 808 2.5E-68 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 Hamap MF_01973 Lon protease [lon]. 45 810 64.448 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 Gene3D G3DSA:3.40.50.300 350 526 3.5E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05995 1b0ebe74eb24e6a0560ca1e6c6a37960 845 SMART SM00382 385 538 6.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS00180 c924c4a44ddf44c5e6ff95f64f319d5e 426 PANTHER PTHR11680 4 423 8.2E-246 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PGJ_RS00180 c924c4a44ddf44c5e6ff95f64f319d5e 426 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 214 230 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PGJ_RS00180 c924c4a44ddf44c5e6ff95f64f319d5e 426 Pfam PF00464 Serine hydroxymethyltransferase 2 394 3.6E-168 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PGJ_RS00180 c924c4a44ddf44c5e6ff95f64f319d5e 426 PIRSF PIRSF000412 1 425 4.4E-160 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PGJ_RS00180 c924c4a44ddf44c5e6ff95f64f319d5e 426 Gene3D G3DSA:3.90.1150.10 292 424 2.6E-52 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS00180 c924c4a44ddf44c5e6ff95f64f319d5e 426 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 1 425 49.663 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PGJ_RS00180 c924c4a44ddf44c5e6ff95f64f319d5e 426 SUPERFAMILY SSF53383 2 424 1.57E-166 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS00180 c924c4a44ddf44c5e6ff95f64f319d5e 426 Gene3D G3DSA:3.40.640.10 29 291 1.5E-102 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS09185 48994aa1160906d4eb4cd327d9c8ea68 326 PIRSF PIRSF000164 1 303 6.0E-37 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 PGJ_RS09185 48994aa1160906d4eb4cd327d9c8ea68 326 PANTHER PTHR11938 39 319 4.5E-45 T 22-04-2016 PGJ_RS09185 48994aa1160906d4eb4cd327d9c8ea68 326 Pfam PF01180 Dihydroorotate dehydrogenase 4 286 5.6E-16 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PGJ_RS09185 48994aa1160906d4eb4cd327d9c8ea68 326 SUPERFAMILY SSF51395 1 301 9.42E-54 T 22-04-2016 PGJ_RS09185 48994aa1160906d4eb4cd327d9c8ea68 326 Gene3D G3DSA:3.20.20.70 2 301 1.7E-49 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS09185 48994aa1160906d4eb4cd327d9c8ea68 326 PANTHER PTHR11938:SF103 39 319 4.5E-45 T 22-04-2016 PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 SUPERFAMILY SSF51735 6 241 1.38E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.1E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.1E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.1E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.1E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.1E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.1E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 PANTHER PTHR24322:SF513 8 136 6.1E-44 T 22-04-2016 PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 PANTHER PTHR24322:SF513 152 184 6.1E-44 T 22-04-2016 PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 PANTHER PTHR24322 8 136 6.1E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 PANTHER PTHR24322 152 184 6.1E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 Gene3D G3DSA:3.40.50.720 5 241 1.3E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09260 d3f72a6ef12adb7d52c0f4ba69e4c4eb 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 8.4E-48 T 22-04-2016 PGJ_RS02805 45d6d2fa02f46c61164fe99726de3a3c 339 Gene3D G3DSA:3.30.470.10 2 159 9.3E-64 T 22-04-2016 PGJ_RS02805 45d6d2fa02f46c61164fe99726de3a3c 339 PANTHER PTHR11825:SF2 1 337 9.7E-142 T 22-04-2016 PGJ_RS02805 45d6d2fa02f46c61164fe99726de3a3c 339 PIRSF PIRSF006468 1 339 1.7E-118 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 PGJ_RS02805 45d6d2fa02f46c61164fe99726de3a3c 339 PANTHER PTHR11825 1 337 9.7E-142 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PGJ_RS02805 45d6d2fa02f46c61164fe99726de3a3c 339 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 29 336 6.5E-111 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 PGJ_RS02805 45d6d2fa02f46c61164fe99726de3a3c 339 Gene3D G3DSA:3.20.10.10 160 325 2.4E-54 T 22-04-2016 PGJ_RS02805 45d6d2fa02f46c61164fe99726de3a3c 339 SUPERFAMILY SSF56752 2 335 1.96E-99 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PGJ_RS02805 45d6d2fa02f46c61164fe99726de3a3c 339 Pfam PF01063 Amino-transferase class IV 55 292 2.9E-32 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PGJ_RS08475 cd4c8103209b9e53370ddb1a31295cbe 386 PANTHER PTHR21716:SF7 20 370 8.9E-55 T 22-04-2016 PGJ_RS08475 cd4c8103209b9e53370ddb1a31295cbe 386 PANTHER PTHR21716 20 370 8.9E-55 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like PGJ_RS08475 cd4c8103209b9e53370ddb1a31295cbe 386 Pfam PF01594 Domain of unknown function DUF20 17 355 4.9E-47 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like PGJ_RS04695 fb416b16b74f5694f6b7075e36d9d03c 398 Gene3D G3DSA:3.40.350.10 9 134 1.5E-15 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PGJ_RS04695 fb416b16b74f5694f6b7075e36d9d03c 398 Pfam PF00557 Metallopeptidase family M24 143 376 1.3E-38 T 22-04-2016 IPR000994 Peptidase M24, structural domain PGJ_RS04695 fb416b16b74f5694f6b7075e36d9d03c 398 PANTHER PTHR10804:SF48 28 84 3.9E-86 T 22-04-2016 PGJ_RS04695 fb416b16b74f5694f6b7075e36d9d03c 398 PANTHER PTHR10804:SF48 117 395 3.9E-86 T 22-04-2016 PGJ_RS04695 fb416b16b74f5694f6b7075e36d9d03c 398 SUPERFAMILY SSF53092 10 135 5.23E-21 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal PGJ_RS04695 fb416b16b74f5694f6b7075e36d9d03c 398 Gene3D G3DSA:3.90.230.10 135 395 3.7E-54 T 22-04-2016 IPR000994 Peptidase M24, structural domain PGJ_RS04695 fb416b16b74f5694f6b7075e36d9d03c 398 PANTHER PTHR10804 28 84 3.9E-86 T 22-04-2016 PGJ_RS04695 fb416b16b74f5694f6b7075e36d9d03c 398 PANTHER PTHR10804 117 395 3.9E-86 T 22-04-2016 PGJ_RS04695 fb416b16b74f5694f6b7075e36d9d03c 398 Pfam PF01321 Creatinase/Prolidase N-terminal domain 16 136 8.8E-13 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 PGJ_RS04695 fb416b16b74f5694f6b7075e36d9d03c 398 SUPERFAMILY SSF55920 135 392 7.2E-50 T 22-04-2016 IPR000994 Peptidase M24, structural domain PGJ_RS04835 9299c43a4d555f24c400cfc27198b671 506 SMART SM00028 123 156 0.0043 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04835 9299c43a4d555f24c400cfc27198b671 506 SUPERFAMILY SSF48452 287 315 4.17E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04835 9299c43a4d555f24c400cfc27198b671 506 SUPERFAMILY SSF48452 58 175 4.17E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04835 9299c43a4d555f24c400cfc27198b671 506 Gene3D G3DSA:1.25.40.10 123 169 4.8E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01205 3a65b6aac548883e946d5e4b4779a7fc 308 PANTHER PTHR30419 1 294 1.1E-83 T 22-04-2016 PGJ_RS01205 3a65b6aac548883e946d5e4b4779a7fc 308 SUPERFAMILY SSF46785 1 86 2.82E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS01205 3a65b6aac548883e946d5e4b4779a7fc 308 PANTHER PTHR30419:SF4 1 294 1.1E-83 T 22-04-2016 PGJ_RS01205 3a65b6aac548883e946d5e4b4779a7fc 308 Gene3D G3DSA:1.10.10.10 1 84 3.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS01205 3a65b6aac548883e946d5e4b4779a7fc 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.3E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PGJ_RS01205 3a65b6aac548883e946d5e4b4779a7fc 308 Pfam PF03466 LysR substrate binding domain 87 293 3.7E-36 T 22-04-2016 IPR005119 LysR, substrate-binding PGJ_RS01205 3a65b6aac548883e946d5e4b4779a7fc 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PGJ_RS01205 3a65b6aac548883e946d5e4b4779a7fc 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PGJ_RS01205 3a65b6aac548883e946d5e4b4779a7fc 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PGJ_RS01205 3a65b6aac548883e946d5e4b4779a7fc 308 Gene3D G3DSA:3.40.190.10 175 268 2.0E-20 T 22-04-2016 PGJ_RS01205 3a65b6aac548883e946d5e4b4779a7fc 308 SUPERFAMILY SSF53850 88 297 2.9E-33 T 22-04-2016 PGJ_RS01205 3a65b6aac548883e946d5e4b4779a7fc 308 Gene3D G3DSA:3.40.190.10 90 174 3.0E-11 T 22-04-2016 PGJ_RS05530 32f29d7b3e305fbf6b15fd486cb3df84 757 Gene3D G3DSA:2.170.130.10 108 232 7.3E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS05530 32f29d7b3e305fbf6b15fd486cb3df84 757 Pfam PF13715 CarboxypepD_reg-like domain 29 116 2.3E-20 T 22-04-2016 PGJ_RS05530 32f29d7b3e305fbf6b15fd486cb3df84 757 Pfam PF07715 TonB-dependent Receptor Plug Domain 126 229 6.6E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS05530 32f29d7b3e305fbf6b15fd486cb3df84 757 SUPERFAMILY SSF56935 112 755 5.5E-99 T 22-04-2016 PGJ_RS05530 32f29d7b3e305fbf6b15fd486cb3df84 757 Gene3D G3DSA:2.40.170.20 233 755 7.3E-78 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS05530 32f29d7b3e305fbf6b15fd486cb3df84 757 PANTHER PTHR30069 391 588 1.3E-51 T 22-04-2016 PGJ_RS05530 32f29d7b3e305fbf6b15fd486cb3df84 757 PANTHER PTHR30069 4 358 1.3E-51 T 22-04-2016 PGJ_RS05530 32f29d7b3e305fbf6b15fd486cb3df84 757 PANTHER PTHR30069:SF2 391 588 1.3E-51 T 22-04-2016 PGJ_RS05530 32f29d7b3e305fbf6b15fd486cb3df84 757 PANTHER PTHR30069:SF2 4 358 1.3E-51 T 22-04-2016 PGJ_RS05530 32f29d7b3e305fbf6b15fd486cb3df84 757 SUPERFAMILY SSF49464 27 114 1.65E-15 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS05530 32f29d7b3e305fbf6b15fd486cb3df84 757 Pfam PF00593 TonB dependent receptor 503 753 1.1E-28 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS05530 32f29d7b3e305fbf6b15fd486cb3df84 757 Gene3D G3DSA:2.60.40.1120 29 104 2.5E-16 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS06685 de32a238ebc3908e4f1ff765b1dd8472 336 Gene3D G3DSA:2.60.120.10 6 226 4.0E-71 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PGJ_RS06685 de32a238ebc3908e4f1ff765b1dd8472 336 PANTHER PTHR18964 13 269 4.1E-56 T 22-04-2016 PGJ_RS06685 de32a238ebc3908e4f1ff765b1dd8472 336 SUPERFAMILY SSF51182 6 321 1.16E-84 T 22-04-2016 IPR011051 RmlC-like cupin domain PGJ_RS06685 de32a238ebc3908e4f1ff765b1dd8472 336 Gene3D G3DSA:2.60.120.10 241 329 2.2E-9 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PGJ_RS06685 de32a238ebc3908e4f1ff765b1dd8472 336 PIRSF PIRSF036894 7 325 1.3E-95 T 22-04-2016 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 PGJ_RS06685 de32a238ebc3908e4f1ff765b1dd8472 336 PANTHER PTHR18964:SF114 13 269 4.1E-56 T 22-04-2016 PGJ_RS06685 de32a238ebc3908e4f1ff765b1dd8472 336 Pfam PF01238 Phosphomannose isomerase type I 20 118 2.5E-13 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 PGJ_RS00965 6723372e05d2ae0bedda5f9d9f3d765d 413 PANTHER PTHR14741 248 375 1.3E-23 T 22-04-2016 PGJ_RS00965 6723372e05d2ae0bedda5f9d9f3d765d 413 PIRSF PIRSF036428 13 413 1.9E-115 T 22-04-2016 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|KEGG: 00860+2.1.1.132|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00148 PGJ_RS00965 6723372e05d2ae0bedda5f9d9f3d765d 413 SUPERFAMILY SSF53335 260 390 7.54E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS00965 6723372e05d2ae0bedda5f9d9f3d765d 413 SUPERFAMILY SSF53790 19 220 1.06E-31 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PGJ_RS00965 6723372e05d2ae0bedda5f9d9f3d765d 413 Gene3D G3DSA:3.40.50.150 257 376 2.2E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS00965 6723372e05d2ae0bedda5f9d9f3d765d 413 Gene3D G3DSA:3.30.950.10 121 222 5.3E-13 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PGJ_RS00965 6723372e05d2ae0bedda5f9d9f3d765d 413 PANTHER PTHR14741:SF34 248 375 1.3E-23 T 22-04-2016 PGJ_RS00965 6723372e05d2ae0bedda5f9d9f3d765d 413 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 250 371 2.3E-25 T 22-04-2016 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PGJ_RS00965 6723372e05d2ae0bedda5f9d9f3d765d 413 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 20 217 3.8E-44 T 22-04-2016 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 PGJ_RS00965 6723372e05d2ae0bedda5f9d9f3d765d 413 Gene3D G3DSA:3.40.1010.10 17 120 1.1E-12 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PGJ_RS00965 6723372e05d2ae0bedda5f9d9f3d765d 413 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 34 201 2.5E-10 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PGJ_RS02600 31bcabae3724da2fc3a9040c6a9b39cd 154 SUPERFAMILY SSF141322 85 146 3.53E-8 T 22-04-2016 PGJ_RS02600 31bcabae3724da2fc3a9040c6a9b39cd 154 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 146 9.6E-22 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain PGJ_RS02600 31bcabae3724da2fc3a9040c6a9b39cd 154 Gene3D G3DSA:2.40.50.140 87 146 1.8E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS06860 686b9d7bc43e95bf9e08ae009b8481b3 346 Gene3D G3DSA:2.130.10.10 217 344 1.2E-4 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PGJ_RS06860 686b9d7bc43e95bf9e08ae009b8481b3 346 SUPERFAMILY SSF50969 221 345 1.33E-6 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 Pfam PF00448 SRP54-type protein, GTPase domain 116 315 3.1E-77 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 SMART SM00382 114 315 5.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 PANTHER PTHR11564 9 317 2.6E-130 T 22-04-2016 PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 SUPERFAMILY SSF52540 113 316 1.57E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 SMART SM00962 115 316 6.6E-117 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 39 315 8.4E-110 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 39 316 61.158 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 SMART SM00963 15 96 1.6E-20 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 SUPERFAMILY SSF47364 13 89 4.06E-18 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 Pfam PF02881 SRP54-type protein, helical bundle domain 29 91 7.3E-12 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 Gene3D G3DSA:3.40.50.300 110 316 1.1E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 289 302 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 PANTHER PTHR11564:SF16 9 317 2.6E-130 T 22-04-2016 PGJ_RS00700 1c182ab7986edc9dbf55afb227444768 317 Gene3D G3DSA:1.20.120.140 17 98 6.4E-28 T 22-04-2016 PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 PANTHER PTHR11851 11 909 1.8E-198 T 22-04-2016 PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 SUPERFAMILY SSF63411 335 475 2.97E-9 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 SUPERFAMILY SSF63411 764 939 1.92E-16 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 SUPERFAMILY SSF63411 513 736 2.79E-26 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 SUPERFAMILY SSF63411 32 253 4.02E-41 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 Pfam PF05193 Peptidase M16 inactive domain 690 872 8.4E-22 T 22-04-2016 IPR007863 Peptidase M16, C-terminal PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 Pfam PF05193 Peptidase M16 inactive domain 208 394 2.9E-19 T 22-04-2016 IPR007863 Peptidase M16, C-terminal PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 Gene3D G3DSA:3.30.830.10 512 739 4.3E-22 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 Gene3D G3DSA:3.30.830.10 22 260 1.2E-46 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 Gene3D G3DSA:3.30.830.10 802 934 7.0E-12 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 PANTHER PTHR11851:SF144 11 909 1.8E-198 T 22-04-2016 PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 Pfam PF00675 Insulinase (Peptidase family M16) 50 192 9.1E-25 T 22-04-2016 IPR011765 Peptidase M16, N-terminal PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 Gene3D G3DSA:3.30.830.10 336 470 5.4E-6 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PGJ_RS00900 5b1f3a52e16c6f492f8019e3a688d871 941 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 67 90 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 PGJ_RS03225 abffd457912dda0131946d65f7e1ad91 245 SUPERFAMILY SSF52540 2 238 6.78E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03225 abffd457912dda0131946d65f7e1ad91 245 Pfam PF00005 ABC transporter 18 176 3.3E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS03225 abffd457912dda0131946d65f7e1ad91 245 PANTHER PTHR24220 4 244 2.4E-63 T 22-04-2016 PGJ_RS03225 abffd457912dda0131946d65f7e1ad91 245 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS03225 abffd457912dda0131946d65f7e1ad91 245 PANTHER PTHR24220:SF525 4 244 2.4E-63 T 22-04-2016 PGJ_RS03225 abffd457912dda0131946d65f7e1ad91 245 Gene3D G3DSA:3.40.50.300 2 241 4.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03225 abffd457912dda0131946d65f7e1ad91 245 SMART SM00382 27 218 9.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS05210 d02bc922e7bebf2d3aa22561015eee5b 189 Gene3D G3DSA:3.90.1720.10 57 185 2.1E-28 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PGJ_RS05210 d02bc922e7bebf2d3aa22561015eee5b 189 PANTHER PTHR21666 35 180 3.8E-13 T 22-04-2016 PGJ_RS05210 d02bc922e7bebf2d3aa22561015eee5b 189 SUPERFAMILY SSF54001 53 183 5.4E-27 T 22-04-2016 PGJ_RS05210 d02bc922e7bebf2d3aa22561015eee5b 189 Pfam PF00877 NlpC/P60 family 70 179 1.1E-21 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 PIRSF PIRSF001365 1 297 3.6E-86 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 Gene3D G3DSA:3.20.20.70 3 292 9.8E-104 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 Pfam PF00701 Dihydrodipicolinate synthetase family 6 285 1.2E-83 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 SUPERFAMILY SSF51569 6 292 1.0E-91 T 22-04-2016 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 293 58.114 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 PANTHER PTHR12128 1 294 2.4E-112 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 168 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 SMART SM01130 5 295 1.1E-117 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 PANTHER PTHR12128:SF34 1 294 2.4E-112 T 22-04-2016 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 6.5E-26 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 6.5E-26 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 107 123 6.5E-26 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 6.5E-26 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PGJ_RS09170 c4b0db026da1b534d9417328c3fabfe6 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 11 291 1.3E-95 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS08715 fea00f6b3a540be9cf5873e8038627c9 847 PANTHER PTHR38454 12 844 2.8E-47 T 22-04-2016 PGJ_RS08715 fea00f6b3a540be9cf5873e8038627c9 847 PANTHER PTHR38454:SF1 12 844 2.8E-47 T 22-04-2016 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 SUPERFAMILY SSF52954 361 446 8.61E-20 T 22-04-2016 IPR004154 Anticodon-binding PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 PIRSF PIRSF001549 1 453 1.3E-126 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 443 1.9E-119 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 SUPERFAMILY SSF55681 4 353 3.78E-69 T 22-04-2016 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 PANTHER PTHR11476:SF1 1 73 2.7E-177 T 22-04-2016 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 PANTHER PTHR11476:SF1 96 448 2.7E-177 T 22-04-2016 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 Pfam PF13393 Histidyl-tRNA synthetase 97 344 4.3E-28 T 22-04-2016 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 Pfam PF13393 Histidyl-tRNA synthetase 9 72 4.5E-5 T 22-04-2016 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 PANTHER PTHR11476 1 73 2.7E-177 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 PANTHER PTHR11476 96 448 2.7E-177 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 Gene3D G3DSA:3.30.930.10 2 212 1.7E-93 T 22-04-2016 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 Gene3D G3DSA:3.30.930.10 264 356 1.7E-93 T 22-04-2016 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 451 25.591 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 Pfam PF03129 Anticodon binding domain 381 446 1.0E-10 T 22-04-2016 IPR004154 Anticodon-binding PGJ_RS09230 68f3151fd542f6a2d09187d720132a9b 454 Gene3D G3DSA:3.40.50.800 361 447 1.4E-24 T 22-04-2016 IPR004154 Anticodon-binding PGJ_RS02325 75999ca4946083f466d643868abbacdb 459 Pfam PF01212 Beta-eliminating lyase 47 423 1.8E-99 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 PGJ_RS02325 75999ca4946083f466d643868abbacdb 459 SUPERFAMILY SSF53383 7 456 4.64E-133 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS02325 75999ca4946083f466d643868abbacdb 459 PANTHER PTHR32325 1 456 1.6E-209 T 22-04-2016 PGJ_RS02325 75999ca4946083f466d643868abbacdb 459 PIRSF PIRSF001386 1 459 1.3E-222 T 22-04-2016 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 PGJ_RS02325 75999ca4946083f466d643868abbacdb 459 Gene3D G3DSA:3.40.640.10 128 273 5.1E-7 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS02325 75999ca4946083f466d643868abbacdb 459 Gene3D G3DSA:3.90.1150.10 275 456 9.4E-63 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS02325 75999ca4946083f466d643868abbacdb 459 Gene3D G3DSA:3.90.1150.10 5 121 1.6E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS06160 2cac53226e45d1c46d09e7dcd13f3ad1 419 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 210 419 6.0E-62 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS06160 2cac53226e45d1c46d09e7dcd13f3ad1 419 Pfam PF00953 Glycosyl transferase family 4 100 323 3.9E-40 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS06160 2cac53226e45d1c46d09e7dcd13f3ad1 419 PANTHER PTHR22926 2 153 1.7E-131 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS06160 2cac53226e45d1c46d09e7dcd13f3ad1 419 PANTHER PTHR22926 191 419 1.7E-131 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS06160 2cac53226e45d1c46d09e7dcd13f3ad1 419 PANTHER PTHR22926:SF5 2 153 1.7E-131 T 22-04-2016 PGJ_RS06160 2cac53226e45d1c46d09e7dcd13f3ad1 419 PANTHER PTHR22926:SF5 191 419 1.7E-131 T 22-04-2016 PGJ_RS06160 2cac53226e45d1c46d09e7dcd13f3ad1 419 ProSitePatterns PS01347 MraY family signature 1. 69 81 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS06160 2cac53226e45d1c46d09e7dcd13f3ad1 419 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 26 417 21.314 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS06160 2cac53226e45d1c46d09e7dcd13f3ad1 419 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 69 81 1.1E-4 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS06160 2cac53226e45d1c46d09e7dcd13f3ad1 419 ProSitePatterns PS01348 MraY family signature 2. 228 239 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 SUPERFAMILY SSF56053 83 180 4.32E-30 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 SUPERFAMILY SSF56053 1 82 8.24E-27 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 Pfam PF00347 Ribosomal protein L6 11 82 2.7E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 Pfam PF00347 Ribosomal protein L6 90 167 3.5E-16 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 180 34.974 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 PANTHER PTHR11655:SF14 1 183 4.6E-80 T 22-04-2016 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 180 1.2E-70 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 PIRSF PIRSF002162 1 181 1.4E-47 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 PANTHER PTHR11655 1 183 4.6E-80 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 Gene3D G3DSA:3.90.930.12 2 82 1.9E-30 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.8E-23 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 PRINTS PR00059 Ribosomal protein L6 signature 145 166 1.8E-23 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 158 166 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08315 f09290afe5aea131fe37f7394507151d 183 Gene3D G3DSA:3.90.930.12 83 180 1.5E-34 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 PANTHER PTHR11532:SF54 117 475 6.5E-81 T 22-04-2016 PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 SUPERFAMILY SSF49299 650 734 4.45E-22 T 22-04-2016 IPR000601 PKD domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 SUPERFAMILY SSF49299 438 562 1.7E-23 T 22-04-2016 IPR000601 PKD domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 SMART SM00089 655 735 1.2E-17 T 22-04-2016 IPR022409 PKD/Chitinase domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 SMART SM00089 483 563 5.3E-16 T 22-04-2016 IPR022409 PKD/Chitinase domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 SMART SM00089 568 647 3.6E-9 T 22-04-2016 IPR022409 PKD/Chitinase domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 Gene3D G3DSA:3.40.630.10 111 393 2.5E-70 T 22-04-2016 PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 SUPERFAMILY SSF49464 397 481 1.1E-9 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 ProSitePatterns PS00133 Zinc carboxypeptidases, zinc-binding region 2 signature. 285 295 - T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 Gene3D G3DSA:2.60.40.670 652 734 1.1E-22 T 22-04-2016 IPR000601 PKD domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 Gene3D G3DSA:2.60.40.670 566 650 2.4E-18 T 22-04-2016 IPR000601 PKD domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 Gene3D G3DSA:2.60.40.670 481 564 3.2E-21 T 22-04-2016 IPR000601 PKD domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 Pfam PF00801 PKD domain 575 634 6.1E-7 T 22-04-2016 IPR000601 PKD domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 Pfam PF00801 PKD domain 661 724 7.0E-11 T 22-04-2016 IPR000601 PKD domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 Pfam PF00801 PKD domain 487 553 5.8E-13 T 22-04-2016 IPR000601 PKD domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 Gene3D G3DSA:2.60.40.1120 397 475 3.9E-15 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 282 295 7.8E-10 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 143 155 7.8E-10 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 241 249 7.8E-10 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 167 181 7.8E-10 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 755 818 9.0E-11 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 SUPERFAMILY SSF49299 565 651 1.05E-17 T 22-04-2016 IPR000601 PKD domain PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 Pfam PF00246 Zinc carboxypeptidase 124 385 8.8E-58 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 SMART SM00631 117 368 3.9E-40 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 SUPERFAMILY SSF53187 110 393 5.62E-67 T 22-04-2016 PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 PANTHER PTHR11532 117 475 6.5E-81 T 22-04-2016 PGJ_RS01060 6681d2842ced2ac634af53e908bb627d 821 Pfam PF13620 Carboxypeptidase regulatory-like domain 397 475 2.7E-9 T 22-04-2016 PGJ_RS02755 994703b4c9831e56398a355d2a21679d 471 PANTHER PTHR23274 19 373 3.0E-13 T 22-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 PGJ_RS02755 994703b4c9831e56398a355d2a21679d 471 PANTHER PTHR23274 389 459 3.0E-13 T 22-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 PGJ_RS02755 994703b4c9831e56398a355d2a21679d 471 Gene3D G3DSA:3.40.50.300 8 213 3.4E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02755 994703b4c9831e56398a355d2a21679d 471 Gene3D G3DSA:3.40.50.300 405 467 7.6E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02755 994703b4c9831e56398a355d2a21679d 471 Pfam PF13604 AAA domain 36 221 2.1E-25 T 22-04-2016 PGJ_RS02755 994703b4c9831e56398a355d2a21679d 471 SUPERFAMILY SSF52540 9 468 6.38E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02755 994703b4c9831e56398a355d2a21679d 471 Pfam PF13538 UvrD-like helicase C-terminal domain 412 463 2.6E-19 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain PGJ_RS02755 994703b4c9831e56398a355d2a21679d 471 PANTHER PTHR23274:SF1 19 373 3.0E-13 T 22-04-2016 PGJ_RS02755 994703b4c9831e56398a355d2a21679d 471 PANTHER PTHR23274:SF1 389 459 3.0E-13 T 22-04-2016 PGJ_RS05360 6b56daabd25d44ce3c26f80b669954ea 274 SUPERFAMILY SSF53681 115 271 4.97E-33 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS05360 6b56daabd25d44ce3c26f80b669954ea 274 PANTHER PTHR21198 1 273 8.4E-87 T 22-04-2016 PGJ_RS05360 6b56daabd25d44ce3c26f80b669954ea 274 Gene3D G3DSA:3.40.50.1860 2 178 2.7E-51 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS05360 6b56daabd25d44ce3c26f80b669954ea 274 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 69 77 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS05360 6b56daabd25d44ce3c26f80b669954ea 274 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 262 3.0E-55 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS05360 6b56daabd25d44ce3c26f80b669954ea 274 PANTHER PTHR21198:SF2 1 273 8.4E-87 T 22-04-2016 PGJ_RS05360 6b56daabd25d44ce3c26f80b669954ea 274 Hamap MF_00258 Glutamate racemase [murI]. 3 265 31.287 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS05360 6b56daabd25d44ce3c26f80b669954ea 274 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 222 3.6E-36 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS05360 6b56daabd25d44ce3c26f80b669954ea 274 SUPERFAMILY SSF53681 4 112 3.27E-29 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS05360 6b56daabd25d44ce3c26f80b669954ea 274 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 188 198 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS08630 8b91a79f561658535568e102bd548605 625 SMART SM01228 550 621 4.6E-38 T 22-04-2016 PGJ_RS08630 8b91a79f561658535568e102bd548605 625 PANTHER PTHR11806 1 621 0.0 T 22-04-2016 PGJ_RS08630 8b91a79f561658535568e102bd548605 625 PANTHER PTHR11806:SF0 1 621 0.0 T 22-04-2016 PGJ_RS08630 8b91a79f561658535568e102bd548605 625 SUPERFAMILY SSF51905 4 64 3.32E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS08630 8b91a79f561658535568e102bd548605 625 SUPERFAMILY SSF51905 95 259 3.32E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS08630 8b91a79f561658535568e102bd548605 625 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 366 389 - T 22-04-2016 IPR020595 MnmG-related, conserved site PGJ_RS08630 8b91a79f561658535568e102bd548605 625 Gene3D G3DSA:3.50.50.60 5 222 5.7E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS08630 8b91a79f561658535568e102bd548605 625 Pfam PF13932 GidA associated domain 399 620 4.1E-63 T 22-04-2016 IPR026904 GidA associated domain 3 PGJ_RS08630 8b91a79f561658535568e102bd548605 625 Pfam PF01134 Glucose inhibited division protein A 6 395 4.9E-155 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 PGJ_RS08630 8b91a79f561658535568e102bd548605 625 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 625 38.871 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 PGJ_RS08630 8b91a79f561658535568e102bd548605 625 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 271 285 - T 22-04-2016 IPR020595 MnmG-related, conserved site PGJ_RS08630 8b91a79f561658535568e102bd548605 625 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 621 8.7E-240 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 PGJ_RS08220 98533c31b66184b2fe2651fbd9a5ca58 225 SUPERFAMILY SSF63999 3 145 6.41E-30 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 PGJ_RS08220 98533c31b66184b2fe2651fbd9a5ca58 225 SMART SM00983 154 214 4.5E-4 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 PGJ_RS08220 98533c31b66184b2fe2651fbd9a5ca58 225 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 43 133 1.2E-15 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 PGJ_RS08220 98533c31b66184b2fe2651fbd9a5ca58 225 Gene3D G3DSA:3.40.50.10240 15 134 5.5E-19 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 PGJ_RS08220 98533c31b66184b2fe2651fbd9a5ca58 225 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 41 217 7.0E-32 T 22-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 PGJ_RS08370 4f012a1e7ebb905bc6741ab82c2b98bc 89 PIRSF PIRSF002144 1 89 2.3E-31 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08370 4f012a1e7ebb905bc6741ab82c2b98bc 89 SUPERFAMILY SSF54570 2 84 3.4E-34 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 PGJ_RS08370 4f012a1e7ebb905bc6741ab82c2b98bc 89 Pfam PF00203 Ribosomal protein S19 3 83 1.0E-35 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08370 4f012a1e7ebb905bc6741ab82c2b98bc 89 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.466 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08370 4f012a1e7ebb905bc6741ab82c2b98bc 89 PANTHER PTHR11880 1 89 6.8E-49 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08370 4f012a1e7ebb905bc6741ab82c2b98bc 89 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 89 4.4E-43 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 PGJ_RS08370 4f012a1e7ebb905bc6741ab82c2b98bc 89 Gene3D G3DSA:3.30.860.10 1 89 7.9E-39 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 PGJ_RS08370 4f012a1e7ebb905bc6741ab82c2b98bc 89 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 PGJ_RS08370 4f012a1e7ebb905bc6741ab82c2b98bc 89 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.2E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08370 4f012a1e7ebb905bc6741ab82c2b98bc 89 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.2E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08370 4f012a1e7ebb905bc6741ab82c2b98bc 89 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.2E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PGJ_RS05510 a3f3738544ebfbc34132623ff1c85330 252 SMART SM00382 33 222 9.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS05510 a3f3738544ebfbc34132623ff1c85330 252 SUPERFAMILY SSF52540 4 242 1.65E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05510 a3f3738544ebfbc34132623ff1c85330 252 Pfam PF00005 ABC transporter 27 173 9.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS05510 a3f3738544ebfbc34132623ff1c85330 252 PANTHER PTHR24220:SF73 6 232 4.4E-68 T 22-04-2016 PGJ_RS05510 a3f3738544ebfbc34132623ff1c85330 252 PANTHER PTHR24220 6 232 4.4E-68 T 22-04-2016 PGJ_RS05510 a3f3738544ebfbc34132623ff1c85330 252 Gene3D G3DSA:3.40.50.300 2 239 2.4E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 PANTHER PTHR30314:SF3 18 364 4.1E-126 T 22-04-2016 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 SMART SM00865 213 332 8.5E-26 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 19 179 5.0E-36 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 SMART SM00864 18 211 3.0E-84 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 14 372 31.69 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 ProSitePatterns PS01135 FtsZ protein signature 2. 104 125 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 SUPERFAMILY SSF55307 213 329 1.37E-28 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 PANTHER PTHR30314 18 364 4.1E-126 T 22-04-2016 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 16 332 4.0E-97 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 Gene3D G3DSA:3.30.1330.20 221 326 1.2E-30 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 Gene3D G3DSA:3.40.50.1440 19 220 3.8E-79 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 PRINTS PR00423 Cell division protein FtsZ signature 195 217 5.62E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 PRINTS PR00423 Cell division protein FtsZ signature 218 239 5.62E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 PRINTS PR00423 Cell division protein FtsZ signature 133 154 5.62E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 PRINTS PR00423 Cell division protein FtsZ signature 105 125 5.62E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 SUPERFAMILY SSF52490 19 214 4.58E-57 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PGJ_RS06125 afe208268cd19428da3bb813598e78e7 457 Pfam PF12327 FtsZ family, C-terminal domain 228 324 1.4E-12 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal PGJ_RS00870 ef51cb759d2b113f0c199849f180db7a 235 SUPERFAMILY SSF56925 35 226 7.59E-13 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PGJ_RS00870 ef51cb759d2b113f0c199849f180db7a 235 Pfam PF13505 Outer membrane protein beta-barrel domain 14 184 2.4E-11 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel PGJ_RS00870 ef51cb759d2b113f0c199849f180db7a 235 Gene3D G3DSA:2.40.160.20 35 226 1.4E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PGJ_RS07820 053b94d4cf69466f2e35be1ec0f8c2a6 439 SUPERFAMILY SSF52540 76 343 2.95E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07820 053b94d4cf69466f2e35be1ec0f8c2a6 439 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 36 72 9.0E-5 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PGJ_RS07820 053b94d4cf69466f2e35be1ec0f8c2a6 439 Gene3D G3DSA:3.40.50.300 76 342 1.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07820 053b94d4cf69466f2e35be1ec0f8c2a6 439 PANTHER PTHR15184 32 439 2.9E-156 T 22-04-2016 PGJ_RS07820 053b94d4cf69466f2e35be1ec0f8c2a6 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 324 2.7E-41 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PGJ_RS07820 053b94d4cf69466f2e35be1ec0f8c2a6 439 PANTHER PTHR15184:SF11 32 439 2.9E-156 T 22-04-2016 PGJ_RS02505 731e9216d1a5b6ae63d722ffa332d369 226 Pfam PF13302 Acetyltransferase (GNAT) domain 7 149 1.2E-27 T 22-04-2016 IPR000182 GNAT domain GO:0008080 PGJ_RS02505 731e9216d1a5b6ae63d722ffa332d369 226 PANTHER PTHR13256 1 151 3.3E-31 T 22-04-2016 PGJ_RS02505 731e9216d1a5b6ae63d722ffa332d369 226 SUPERFAMILY SSF55729 2 154 8.12E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS02505 731e9216d1a5b6ae63d722ffa332d369 226 Gene3D G3DSA:3.40.630.30 1 155 4.3E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS02485 57d53a9e3d37cef7ad8923ccd46a42e4 732 SUPERFAMILY SSF82171 31 476 3.27E-47 T 22-04-2016 PGJ_RS02485 57d53a9e3d37cef7ad8923ccd46a42e4 732 SUPERFAMILY SSF53474 482 732 3.16E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS02485 57d53a9e3d37cef7ad8923ccd46a42e4 732 PANTHER PTHR11731 9 732 5.2E-159 T 22-04-2016 PGJ_RS02485 57d53a9e3d37cef7ad8923ccd46a42e4 732 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 126 451 3.1E-94 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 PGJ_RS02485 57d53a9e3d37cef7ad8923ccd46a42e4 732 Gene3D G3DSA:3.40.50.1820 483 732 3.5E-80 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS02485 57d53a9e3d37cef7ad8923ccd46a42e4 732 PANTHER PTHR11731:SF110 9 732 5.2E-159 T 22-04-2016 PGJ_RS02485 57d53a9e3d37cef7ad8923ccd46a42e4 732 Gene3D G3DSA:2.140.10.30 31 468 4.0E-89 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 PGJ_RS02485 57d53a9e3d37cef7ad8923ccd46a42e4 732 Pfam PF00326 Prolyl oligopeptidase family 538 732 1.2E-46 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PGJ_RS03915 a8be9bfae25a5ad551959143a688bab3 336 PANTHER PTHR34308 3 336 5.3E-81 T 22-04-2016 PGJ_RS03915 a8be9bfae25a5ad551959143a688bab3 336 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 15 321 6.7E-61 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 PGJ_RS03915 a8be9bfae25a5ad551959143a688bab3 336 PANTHER PTHR34308:SF1 3 336 5.3E-81 T 22-04-2016 PGJ_RS03915 a8be9bfae25a5ad551959143a688bab3 336 Pfam PF03186 CobD/Cbib protein 15 310 3.0E-97 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 PGJ_RS03915 a8be9bfae25a5ad551959143a688bab3 336 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 331 81.695 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 Gene3D G3DSA:1.20.120.430 133 193 1.7E-50 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 Gene3D G3DSA:1.20.120.430 259 282 1.7E-50 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 Gene3D G3DSA:1.20.120.430 403 474 1.7E-50 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 PANTHER PTHR11649:SF56 13 474 2.6E-124 T 22-04-2016 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 Pfam PF01926 50S ribosome-binding GTPase 230 346 1.1E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 474 1.0E-112 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 SUPERFAMILY SSF52540 199 390 1.01E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 SUPERFAMILY SSF52540 83 163 1.01E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 Pfam PF12631 MnmE helical domain 134 471 4.1E-49 T 22-04-2016 IPR025867 MnmE, helical domain PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 297 315 6.1E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 250 6.1E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 Gene3D G3DSA:3.40.50.300 228 258 1.2E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 Gene3D G3DSA:3.30.1360.120 6 132 5.8E-43 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 Gene3D G3DSA:3.40.50.300 297 398 3.9E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 PANTHER PTHR11649 13 474 2.6E-124 T 22-04-2016 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 474 32.647 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 228 387 4.4E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS04740 7d0fc594cf3756e919238d6b84aa4917 474 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 131 8.4E-38 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 Gene3D G3DSA:1.25.40.10 149 222 6.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 Pfam PF14559 Tetratricopeptide repeat 113 165 6.9E-7 T 22-04-2016 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 SUPERFAMILY SSF48452 379 556 2.65E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 SUPERFAMILY SSF48452 33 164 4.74E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 Pfam PF13181 Tetratricopeptide repeat 71 99 0.033 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 SMART SM00028 32 65 69.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 SMART SM00028 134 167 210.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 SMART SM00028 422 455 3.9E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 SMART SM00028 382 415 110.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 SMART SM00028 66 99 0.36 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 SMART SM00028 491 524 75.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 Pfam PF13174 Tetratricopeptide repeat 178 204 0.059 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 Gene3D G3DSA:1.25.40.10 34 148 3.6E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 PANTHER PTHR23083 309 556 1.1E-45 T 22-04-2016 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 PANTHER PTHR23083 22 234 1.1E-45 T 22-04-2016 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 Pfam PF13431 Tetratricopeptide repeat 445 477 2.5E-6 T 22-04-2016 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 SUPERFAMILY SSF48452 177 264 9.11E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 SUPERFAMILY SSF48452 305 411 9.11E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 Gene3D G3DSA:1.25.40.10 302 556 9.0E-35 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04410 7c15211bb631ccbcfb87369beab9d88d 579 Gene3D G3DSA:1.25.40.10 223 261 9.0E-35 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS06670 87ba5ecb3cdd025035ebd4162d26c879 331 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 196 207 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PGJ_RS06670 87ba5ecb3cdd025035ebd4162d26c879 331 Gene3D G3DSA:3.30.70.20 193 258 1.1E-5 T 22-04-2016 PGJ_RS06670 87ba5ecb3cdd025035ebd4162d26c879 331 Pfam PF13484 4Fe-4S double cluster binding domain 195 258 2.8E-15 T 22-04-2016 PGJ_RS06670 87ba5ecb3cdd025035ebd4162d26c879 331 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 20 313 1.3E-94 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS06670 87ba5ecb3cdd025035ebd4162d26c879 331 PANTHER PTHR30002:SF4 8 313 2.2E-111 T 22-04-2016 PGJ_RS06670 87ba5ecb3cdd025035ebd4162d26c879 331 SUPERFAMILY SSF46548 142 259 4.34E-15 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PGJ_RS06670 87ba5ecb3cdd025035ebd4162d26c879 331 PANTHER PTHR30002 8 313 2.2E-111 T 22-04-2016 PGJ_RS06670 87ba5ecb3cdd025035ebd4162d26c879 331 Pfam PF08331 Domain of unknown function (DUF1730) 70 143 4.3E-20 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS00640 a9846728673c884330845448e5a81ed9 451 SMART SM00257 385 428 4.8E-14 T 22-04-2016 IPR018392 LysM domain PGJ_RS00640 a9846728673c884330845448e5a81ed9 451 SUPERFAMILY SSF54106 384 427 1.31E-10 T 22-04-2016 IPR018392 LysM domain PGJ_RS00640 a9846728673c884330845448e5a81ed9 451 SUPERFAMILY SSF53955 136 282 6.47E-37 T 22-04-2016 IPR023346 Lysozyme-like domain PGJ_RS00640 a9846728673c884330845448e5a81ed9 451 Gene3D G3DSA:3.10.350.10 384 428 5.7E-17 T 22-04-2016 IPR018392 LysM domain PGJ_RS00640 a9846728673c884330845448e5a81ed9 451 Gene3D G3DSA:1.10.530.10 135 281 1.1E-38 T 22-04-2016 PGJ_RS00640 a9846728673c884330845448e5a81ed9 451 PANTHER PTHR21666:SF178 386 427 1.8E-89 T 22-04-2016 PGJ_RS00640 a9846728673c884330845448e5a81ed9 451 PANTHER PTHR21666:SF178 78 365 1.8E-89 T 22-04-2016 PGJ_RS00640 a9846728673c884330845448e5a81ed9 451 PANTHER PTHR21666 386 427 1.8E-89 T 22-04-2016 PGJ_RS00640 a9846728673c884330845448e5a81ed9 451 PANTHER PTHR21666 78 365 1.8E-89 T 22-04-2016 PGJ_RS00640 a9846728673c884330845448e5a81ed9 451 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 156 184 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PGJ_RS00640 a9846728673c884330845448e5a81ed9 451 Pfam PF01476 LysM domain 386 427 2.1E-12 T 22-04-2016 IPR018392 LysM domain PGJ_RS00640 a9846728673c884330845448e5a81ed9 451 Pfam PF01464 Transglycosylase SLT domain 144 246 5.6E-23 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 PGJ_RS01415 2ab5232b933862e2f836e9493a6bd4ac 861 Pfam PF01580 FtsK/SpoIIIE family 636 684 3.0E-13 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 PGJ_RS01415 2ab5232b933862e2f836e9493a6bd4ac 861 Pfam PF01580 FtsK/SpoIIIE family 483 624 2.4E-36 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 PGJ_RS01415 2ab5232b933862e2f836e9493a6bd4ac 861 Gene3D G3DSA:3.40.50.300 455 747 4.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01415 2ab5232b933862e2f836e9493a6bd4ac 861 SUPERFAMILY SSF46785 785 849 1.63E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS01415 2ab5232b933862e2f836e9493a6bd4ac 861 PANTHER PTHR22683:SF41 328 854 5.4E-182 T 22-04-2016 PGJ_RS01415 2ab5232b933862e2f836e9493a6bd4ac 861 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 85 252 9.4E-8 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region PGJ_RS01415 2ab5232b933862e2f836e9493a6bd4ac 861 PANTHER PTHR22683 328 854 5.4E-182 T 22-04-2016 PGJ_RS01415 2ab5232b933862e2f836e9493a6bd4ac 861 Pfam PF09397 Ftsk gamma domain 787 847 3.0E-29 T 22-04-2016 IPR018541 FtsK gamma domain PGJ_RS01415 2ab5232b933862e2f836e9493a6bd4ac 861 SUPERFAMILY SSF52540 454 751 5.63E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01415 2ab5232b933862e2f836e9493a6bd4ac 861 SMART SM00843 785 850 1.1E-35 T 22-04-2016 IPR018541 FtsK gamma domain PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 PANTHER PTHR32282:SF2 11 951 0.0 T 22-04-2016 PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 SUPERFAMILY SSF52540 618 915 1.85E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 Gene3D G3DSA:1.10.8.280 301 408 1.6E-12 T 22-04-2016 PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 Gene3D G3DSA:3.30.1490.20 142 164 3.7E-6 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 Gene3D G3DSA:3.30.1490.20 213 253 3.7E-6 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 SUPERFAMILY SSF52540 432 571 3.63E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 15 930 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 SUPERFAMILY SSF52540 20 215 3.63E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 Gene3D G3DSA:1.20.1580.10 266 299 3.0E-49 T 22-04-2016 PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 Gene3D G3DSA:1.20.1580.10 409 479 3.0E-49 T 22-04-2016 PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 Gene3D G3DSA:1.20.1580.10 102 140 3.0E-49 T 22-04-2016 PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 Gene3D G3DSA:3.40.50.300 480 599 4.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 Gene3D G3DSA:3.40.50.300 610 675 1.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 Gene3D G3DSA:3.40.50.300 827 945 1.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 Gene3D G3DSA:3.40.50.300 3 62 4.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 Gene3D G3DSA:1.20.1580.10 695 826 6.4E-43 T 22-04-2016 PGJ_RS09930 79ee6cae4847644c006a11f6569b77d0 952 PANTHER PTHR32282 11 951 0.0 T 22-04-2016 PGJ_RS08005 7514f8e55d835863d1cb82a135c2cb33 126 Pfam PF01042 Endoribonuclease L-PSP 7 124 4.6E-45 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family PGJ_RS08005 7514f8e55d835863d1cb82a135c2cb33 126 Gene3D G3DSA:3.30.1330.40 1 124 1.8E-50 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PGJ_RS08005 7514f8e55d835863d1cb82a135c2cb33 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 4.6E-53 T 22-04-2016 IPR006056 RidA family PGJ_RS08005 7514f8e55d835863d1cb82a135c2cb33 126 SUPERFAMILY SSF55298 1 125 7.23E-48 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PGJ_RS08005 7514f8e55d835863d1cb82a135c2cb33 126 PANTHER PTHR11803 1 124 7.0E-60 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family PGJ_RS08005 7514f8e55d835863d1cb82a135c2cb33 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 121 - T 22-04-2016 IPR019897 RidA, conserved site PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 Gene3D G3DSA:2.20.28.20 146 177 2.1E-17 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 SUPERFAMILY SSF57770 143 177 3.27E-11 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 PANTHER PTHR11946:SF72 1 635 0.0 T 22-04-2016 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 SUPERFAMILY SSF50249 578 679 1.52E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 Pfam PF01588 Putative tRNA binding domain 585 677 1.1E-27 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 PANTHER PTHR11946 1 635 0.0 T 22-04-2016 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 542 1.6E-159 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 Gene3D G3DSA:1.10.730.10 381 542 1.9E-44 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 Gene3D G3DSA:2.40.50.140 571 680 6.6E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 554 680 3.1E-42 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 SUPERFAMILY SSF52374 7 142 4.74E-94 T 22-04-2016 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 SUPERFAMILY SSF52374 177 385 4.74E-94 T 22-04-2016 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 553 39.774 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 SUPERFAMILY SSF47323 390 593 5.05E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 Gene3D G3DSA:3.40.50.620 7 145 1.7E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 Gene3D G3DSA:3.40.50.620 184 380 1.7E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 Pfam PF09334 tRNA synthetases class I (M) 9 397 2.4E-156 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 255 266 2.6E-28 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 43 57 2.6E-28 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 290 305 2.6E-28 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 2.6E-28 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 2.6E-28 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 91 102 2.6E-28 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PGJ_RS00775 8e799c6fc9946b7eb5f15d72aaa47d24 680 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS01465 69adc0967d7de7e2375890e6cfc8a17d 396 PANTHER PTHR30224 249 390 9.5E-12 T 22-04-2016 PGJ_RS01465 69adc0967d7de7e2375890e6cfc8a17d 396 Pfam PF04205 FMN-binding domain 95 173 4.0E-14 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PGJ_RS01465 69adc0967d7de7e2375890e6cfc8a17d 396 Pfam PF12801 4Fe-4S binding domain 255 301 8.3E-13 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PGJ_RS01465 69adc0967d7de7e2375890e6cfc8a17d 396 Pfam PF12801 4Fe-4S binding domain 11 27 390.0 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PGJ_RS01465 69adc0967d7de7e2375890e6cfc8a17d 396 Pfam PF12801 4Fe-4S binding domain 347 387 1.7E-4 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PGJ_RS01465 69adc0967d7de7e2375890e6cfc8a17d 396 SMART SM00900 95 176 1.2E-12 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 Gene3D G3DSA:3.40.50.300 3 108 1.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 Gene3D G3DSA:3.40.50.300 196 290 1.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 SUPERFAMILY SSF52540 3 649 1.59E-166 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 Gene3D G3DSA:1.10.486.10 394 546 8.3E-43 T 22-04-2016 PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 Gene3D G3DSA:1.10.10.160 112 195 9.0E-21 T 22-04-2016 IPR013986 DExx box DNA helicase domain PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 PANTHER PTHR11070 537 651 4.6E-186 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 PANTHER PTHR11070 1 521 4.6E-186 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 Gene3D G3DSA:3.40.50.300 291 393 7.7E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 Gene3D G3DSA:3.40.50.300 560 649 7.7E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 Pfam PF13361 UvrD-like helicase C-terminal domain 283 622 9.1E-70 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 277 1.6E-67 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 PANTHER PTHR11070:SF7 537 651 4.6E-186 T 22-04-2016 PGJ_RS04085 26014d5bff7d6f194d98edefb23c8d61 765 PANTHER PTHR11070:SF7 1 521 4.6E-186 T 22-04-2016 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 442 475 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 PANTHER PTHR21091:SF17 316 592 9.0E-56 T 22-04-2016 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 SUPERFAMILY SSF159672 5 242 1.28E-55 T 22-04-2016 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 Pfam PF11761 Cobalamin biosynthesis central region 141 232 9.7E-16 T 22-04-2016 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 369 613 3.1E-110 T 22-04-2016 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 Pfam PF11760 Cobalamin synthesis G N-terminal 56 136 1.6E-33 T 22-04-2016 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 SUPERFAMILY SSF53790 364 612 5.63E-64 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 370 574 5.3E-39 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 Pfam PF01890 Cobalamin synthesis G C-terminus 235 358 7.3E-26 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 PANTHER PTHR21091 316 592 9.0E-56 T 22-04-2016 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 Gene3D G3DSA:3.40.1010.10 366 476 5.3E-28 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 SUPERFAMILY SSF159664 228 359 4.71E-29 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 Gene3D G3DSA:3.30.950.10 477 597 1.8E-33 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PGJ_RS00950 a734718d9220f54c8b14b68de2348e6a 614 Gene3D G3DSA:3.30.420.180 227 359 6.9E-23 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 Hamap MF_00942 Endonuclease III [nth]. 1 211 37.761 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 Gene3D G3DSA:1.10.340.30 23 123 2.1E-35 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 170 2.2E-20 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 Gene3D G3DSA:1.10.1670.10 124 210 1.3E-33 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 TIGRFAM TIGR01083 nth: endonuclease III 6 196 1.9E-72 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 SUPERFAMILY SSF48150 2 210 2.04E-70 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 Pfam PF00633 Helix-hairpin-helix motif 101 128 9.6E-9 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 PANTHER PTHR10359 8 224 5.1E-77 T 22-04-2016 PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 PIRSF PIRSF001435 1 214 6.6E-45 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 189 205 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 SMART SM00525 188 208 7.3E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 PGJ_RS07655 32a0fa899dec30822a2e44b7afeec78c 224 SMART SM00478 39 187 7.4E-57 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PGJ_RS00590 fd24934926d3b2ce67c5b03ae0d0e0b2 324 Gene3D G3DSA:1.10.510.10 141 194 9.9E-9 T 22-04-2016 PGJ_RS00590 fd24934926d3b2ce67c5b03ae0d0e0b2 324 SUPERFAMILY SSF56112 54 195 2.73E-11 T 22-04-2016 IPR011009 Protein kinase-like domain PGJ_RS00590 fd24934926d3b2ce67c5b03ae0d0e0b2 324 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 57 209 2.1E-16 T 22-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 PGJ_RS02570 a48fef5ce5dce8f8ecd0b18767a684e0 492 Gene3D G3DSA:3.60.15.10 1 261 1.8E-72 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS02570 a48fef5ce5dce8f8ecd0b18767a684e0 492 SUPERFAMILY SSF55681 270 490 3.23E-57 T 22-04-2016 PGJ_RS02570 a48fef5ce5dce8f8ecd0b18767a684e0 492 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 354 407 1.0E-23 T 22-04-2016 PGJ_RS02570 a48fef5ce5dce8f8ecd0b18767a684e0 492 SMART SM00849 34 227 2.1E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS02570 a48fef5ce5dce8f8ecd0b18767a684e0 492 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 350 365 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PGJ_RS02570 a48fef5ce5dce8f8ecd0b18767a684e0 492 Pfam PF12706 Beta-lactamase superfamily domain 47 224 1.9E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS02570 a48fef5ce5dce8f8ecd0b18767a684e0 492 SUPERFAMILY SSF56281 1 251 7.73E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS02570 a48fef5ce5dce8f8ecd0b18767a684e0 492 Pfam PF03099 Biotin/lipoate A/B protein ligase family 333 444 7.9E-9 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 PGJ_RS02570 a48fef5ce5dce8f8ecd0b18767a684e0 492 PANTHER PTHR10993 229 491 3.1E-74 T 22-04-2016 PGJ_RS02570 a48fef5ce5dce8f8ecd0b18767a684e0 492 Gene3D G3DSA:3.90.1550.10 274 489 9.7E-67 T 22-04-2016 PGJ_RS02570 a48fef5ce5dce8f8ecd0b18767a684e0 492 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 301 467 8.0E-44 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PGJ_RS02570 a48fef5ce5dce8f8ecd0b18767a684e0 492 Hamap MF_00013 Octanoyltransferase [lipB]. 272 492 32.024 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 PANTHER PTHR32063 578 1038 3.0E-150 T 22-04-2016 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 PANTHER PTHR32063 11 535 3.0E-150 T 22-04-2016 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 Gene3D G3DSA:3.30.2090.10 183 269 5.2E-7 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 SUPERFAMILY SSF82866 823 1041 1.44E-30 T 22-04-2016 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 Gene3D G3DSA:1.10.3850.10 853 1040 3.7E-32 T 22-04-2016 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 SUPERFAMILY SSF82714 185 268 5.49E-7 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 Gene3D G3DSA:1.20.1640.10 294 481 4.8E-26 T 22-04-2016 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 SUPERFAMILY SSF82866 297 479 1.96E-25 T 22-04-2016 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.9E-8 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 1.9E-8 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.9E-8 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.9E-8 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 PANTHER PTHR32063:SF0 578 1038 3.0E-150 T 22-04-2016 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 PANTHER PTHR32063:SF0 11 535 3.0E-150 T 22-04-2016 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 SUPERFAMILY SSF82693 41 130 1.05E-14 T 22-04-2016 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 SUPERFAMILY SSF82693 273 328 2.46E-10 T 22-04-2016 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 SUPERFAMILY SSF82693 143 182 2.46E-10 T 22-04-2016 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 Gene3D G3DSA:3.30.70.1430 41 134 2.6E-17 T 22-04-2016 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 Pfam PF00873 AcrB/AcrD/AcrF family 12 534 6.7E-59 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06880 a4ba6d8165677f7a7d523f9ac53122f4 1064 Pfam PF00873 AcrB/AcrD/AcrF family 591 1039 1.3E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS00425 9fcbdc02381d9d8cbcd7f80d753fe37a 242 Gene3D G3DSA:1.10.10.200 1 76 3.0E-28 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like PGJ_RS00425 9fcbdc02381d9d8cbcd7f80d753fe37a 242 PANTHER PTHR12532 1 239 2.6E-80 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like PGJ_RS00425 9fcbdc02381d9d8cbcd7f80d753fe37a 242 PANTHER PTHR12532:SF0 1 239 2.6E-80 T 22-04-2016 PGJ_RS00425 9fcbdc02381d9d8cbcd7f80d753fe37a 242 Pfam PF01709 Transcriptional regulator 5 235 8.6E-78 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like PGJ_RS00425 9fcbdc02381d9d8cbcd7f80d753fe37a 242 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 236 6.9E-81 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like PGJ_RS00425 9fcbdc02381d9d8cbcd7f80d753fe37a 242 SUPERFAMILY SSF75625 1 238 1.44E-80 T 22-04-2016 IPR029072 YebC-like PGJ_RS00425 9fcbdc02381d9d8cbcd7f80d753fe37a 242 Gene3D G3DSA:3.30.1270.10 210 238 3.7E-35 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 PGJ_RS00425 9fcbdc02381d9d8cbcd7f80d753fe37a 242 Gene3D G3DSA:3.30.1270.10 79 133 3.7E-35 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 PGJ_RS00425 9fcbdc02381d9d8cbcd7f80d753fe37a 242 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 29.7 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like PGJ_RS00425 9fcbdc02381d9d8cbcd7f80d753fe37a 242 Gene3D G3DSA:3.30.70.980 134 201 1.3E-27 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 PGJ_RS06510 0d11e3dc24b2d475d09d521392146001 404 SUPERFAMILY SSF56349 126 397 4.71E-41 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS06510 0d11e3dc24b2d475d09d521392146001 404 PANTHER PTHR30349:SF26 35 403 3.1E-76 T 22-04-2016 PGJ_RS06510 0d11e3dc24b2d475d09d521392146001 404 Pfam PF13102 Phage integrase SAM-like domain 9 164 9.1E-15 T 22-04-2016 IPR025269 Phage integrase SAM-like domain PGJ_RS06510 0d11e3dc24b2d475d09d521392146001 404 Gene3D G3DSA:1.10.443.10 209 400 6.2E-30 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS06510 0d11e3dc24b2d475d09d521392146001 404 PANTHER PTHR30349 35 403 3.1E-76 T 22-04-2016 PGJ_RS06510 0d11e3dc24b2d475d09d521392146001 404 Pfam PF00589 Phage integrase family 212 390 1.1E-19 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS07300 df42af8a0d93dc9eae5d9eba51399062 423 TIGRFAM TIGR01224 hutI: imidazolonepropionase 43 418 5.5E-139 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PGJ_RS07300 df42af8a0d93dc9eae5d9eba51399062 423 PANTHER PTHR22642:SF1 8 423 9.0E-157 T 22-04-2016 PGJ_RS07300 df42af8a0d93dc9eae5d9eba51399062 423 Gene3D G3DSA:2.30.40.10 40 89 1.1E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PGJ_RS07300 df42af8a0d93dc9eae5d9eba51399062 423 Hamap MF_00372 Imidazolonepropionase [hutI]. 9 419 42.196 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PGJ_RS07300 df42af8a0d93dc9eae5d9eba51399062 423 Pfam PF01979 Amidohydrolase family 79 419 8.7E-27 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PGJ_RS07300 df42af8a0d93dc9eae5d9eba51399062 423 Gene3D G3DSA:2.30.40.10 366 421 3.8E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PGJ_RS07300 df42af8a0d93dc9eae5d9eba51399062 423 SUPERFAMILY SSF51338 34 82 8.8E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PGJ_RS07300 df42af8a0d93dc9eae5d9eba51399062 423 SUPERFAMILY SSF51338 379 420 8.8E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PGJ_RS07300 df42af8a0d93dc9eae5d9eba51399062 423 SUPERFAMILY SSF51556 81 380 4.81E-85 T 22-04-2016 IPR032466 Metal-dependent hydrolase PGJ_RS07300 df42af8a0d93dc9eae5d9eba51399062 423 Gene3D G3DSA:3.20.20.140 90 365 7.3E-52 T 22-04-2016 PGJ_RS07300 df42af8a0d93dc9eae5d9eba51399062 423 PANTHER PTHR22642 8 423 9.0E-157 T 22-04-2016 PGJ_RS00435 f218c892fc6853a71304ce7372418de9 262 PANTHER PTHR32552 14 221 3.6E-40 T 22-04-2016 PGJ_RS00435 f218c892fc6853a71304ce7372418de9 262 Gene3D G3DSA:3.30.420.10 57 219 2.6E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS00435 f218c892fc6853a71304ce7372418de9 262 PANTHER PTHR32552:SF23 14 221 3.6E-40 T 22-04-2016 PGJ_RS00435 f218c892fc6853a71304ce7372418de9 262 SUPERFAMILY SSF53098 57 224 7.08E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS00435 f218c892fc6853a71304ce7372418de9 262 Pfam PF00665 Integrase core domain 62 181 3.4E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS00060 6cecc95fc3f17dcd50c1ad77d0a754e6 256 Pfam PF04029 2-phosphosulpholactate phosphatase 20 232 4.2E-64 T 22-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 PGJ_RS00060 6cecc95fc3f17dcd50c1ad77d0a754e6 256 Gene3D G3DSA:3.90.1560.10 17 233 6.2E-63 T 22-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 PGJ_RS00060 6cecc95fc3f17dcd50c1ad77d0a754e6 256 SUPERFAMILY SSF142823 16 232 1.23E-57 T 22-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 PGJ_RS00060 6cecc95fc3f17dcd50c1ad77d0a754e6 256 PANTHER PTHR37311 2 246 4.1E-38 T 22-04-2016 PGJ_RS00060 6cecc95fc3f17dcd50c1ad77d0a754e6 256 PANTHER PTHR37311:SF1 2 246 4.1E-38 T 22-04-2016 PGJ_RS07505 c97f4575aaffe29c66e5d47f6a188c31 416 PANTHER PTHR32347 1 416 9.9E-65 T 22-04-2016 PGJ_RS07505 c97f4575aaffe29c66e5d47f6a188c31 416 Pfam PF13437 HlyD family secretion protein 234 328 3.8E-14 T 22-04-2016 PGJ_RS07505 c97f4575aaffe29c66e5d47f6a188c31 416 Gene3D G3DSA:2.40.50.100 231 262 8.2E-8 T 22-04-2016 PGJ_RS07505 c97f4575aaffe29c66e5d47f6a188c31 416 Gene3D G3DSA:2.40.50.100 76 106 8.2E-8 T 22-04-2016 PGJ_RS07505 c97f4575aaffe29c66e5d47f6a188c31 416 PANTHER PTHR32347:SF16 1 416 9.9E-65 T 22-04-2016 PGJ_RS05515 5cc65dd4a62a12240f9cd24291de46a7 356 SUPERFAMILY SSF81345 9 347 9.55E-66 T 22-04-2016 IPR029022 ABC transporter, BtuC-like PGJ_RS05515 5cc65dd4a62a12240f9cd24291de46a7 356 Gene3D G3DSA:1.10.3470.10 14 350 8.5E-89 T 22-04-2016 IPR029022 ABC transporter, BtuC-like PGJ_RS05515 5cc65dd4a62a12240f9cd24291de46a7 356 PANTHER PTHR30472 15 353 5.8E-100 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PGJ_RS05515 5cc65dd4a62a12240f9cd24291de46a7 356 Pfam PF01032 FecCD transport family 23 347 4.6E-77 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PGJ_RS05515 5cc65dd4a62a12240f9cd24291de46a7 356 PANTHER PTHR30472:SF32 15 353 5.8E-100 T 22-04-2016 PGJ_RS07035 0ef1a56d7b9b2f53a18ad623c1a9f1df 232 SUPERFAMILY SSF56808 6 226 3.01E-79 T 22-04-2016 IPR023674 Ribosomal protein L1-like PGJ_RS07035 0ef1a56d7b9b2f53a18ad623c1a9f1df 232 PIRSF PIRSF002155 1 227 4.8E-74 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 PGJ_RS07035 0ef1a56d7b9b2f53a18ad623c1a9f1df 232 PANTHER PTHR23105:SF5 17 231 3.6E-76 T 22-04-2016 PGJ_RS07035 0ef1a56d7b9b2f53a18ad623c1a9f1df 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site PGJ_RS07035 0ef1a56d7b9b2f53a18ad623c1a9f1df 232 Gene3D G3DSA:3.30.190.20 161 227 5.5E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 PGJ_RS07035 0ef1a56d7b9b2f53a18ad623c1a9f1df 232 Gene3D G3DSA:3.30.190.20 18 68 5.5E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 PGJ_RS07035 0ef1a56d7b9b2f53a18ad623c1a9f1df 232 PANTHER PTHR23105 17 231 3.6E-76 T 22-04-2016 PGJ_RS07035 0ef1a56d7b9b2f53a18ad623c1a9f1df 232 Gene3D G3DSA:3.40.50.790 69 159 4.1E-38 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PGJ_RS07035 0ef1a56d7b9b2f53a18ad623c1a9f1df 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 4.5E-96 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PGJ_RS07035 0ef1a56d7b9b2f53a18ad623c1a9f1df 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 40.324 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PGJ_RS07035 0ef1a56d7b9b2f53a18ad623c1a9f1df 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.2E-50 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 Gene3D G3DSA:3.40.50.1270 202 406 3.2E-80 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 Pfam PF00162 Phosphoglycerate kinase 3 408 1.6E-146 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 Gene3D G3DSA:3.40.50.1260 2 194 8.9E-64 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 PIRSF PIRSF000724 1 418 1.5E-147 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 PRINTS PR00477 Phosphoglycerate kinase family signature 190 212 5.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 PRINTS PR00477 Phosphoglycerate kinase family signature 371 382 5.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 PRINTS PR00477 Phosphoglycerate kinase family signature 29 51 5.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 PRINTS PR00477 Phosphoglycerate kinase family signature 335 360 5.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 PRINTS PR00477 Phosphoglycerate kinase family signature 157 179 5.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 PRINTS PR00477 Phosphoglycerate kinase family signature 394 411 5.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 PRINTS PR00477 Phosphoglycerate kinase family signature 7 23 5.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 PRINTS PR00477 Phosphoglycerate kinase family signature 213 232 5.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 SUPERFAMILY SSF53748 2 417 1.41E-141 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 2 418 38.959 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 PANTHER PTHR11406 141 416 4.4E-204 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS01645 fda9fd10fa041be33a2b806bfc880449 418 PANTHER PTHR11406 1 124 4.4E-204 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 SUPERFAMILY SSF53323 15 229 1.12E-17 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 12 611 4.3E-204 T 22-04-2016 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969|UniPathway: UPA00223 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 261 472 3.8E-53 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 SUPERFAMILY SSF52518 237 496 1.02E-58 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 SUPERFAMILY SSF52922 514 618 6.57E-14 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 PANTHER PTHR32154 7 233 8.3E-205 T 22-04-2016 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 PANTHER PTHR32154 255 421 8.3E-205 T 22-04-2016 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 PANTHER PTHR32154 452 616 8.3E-205 T 22-04-2016 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 Gene3D G3DSA:3.40.50.970 224 429 1.4E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 Gene3D G3DSA:3.40.920.10 13 215 5.6E-29 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 Gene3D G3DSA:3.40.50.920 513 616 8.8E-10 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 PANTHER PTHR32154:SF14 7 233 8.3E-205 T 22-04-2016 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 PANTHER PTHR32154:SF14 255 421 8.3E-205 T 22-04-2016 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 PANTHER PTHR32154:SF14 452 616 8.3E-205 T 22-04-2016 PGJ_RS06825 12f20c97d6042a0d3ae2070186d5156e 619 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 21 211 7.1E-29 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 Pfam PF00009 Elongation factor Tu GTP binding domain 3 195 7.5E-56 T 22-04-2016 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 138 1.1E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 Pfam PF03144 Elongation factor Tu domain 2 218 287 1.2E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 Gene3D G3DSA:3.30.70.870 303 397 9.3E-36 T 22-04-2016 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 1.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 SUPERFAMILY SSF52540 2 201 2.11E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 SUPERFAMILY SSF54980 301 386 1.01E-14 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 SUPERFAMILY SSF50447 152 298 2.29E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 SUPERFAMILY SSF54980 397 510 3.12E-23 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 PANTHER PTHR23115:SF14 2 590 1.0E-256 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 Gene3D G3DSA:2.40.50.250 480 574 1.5E-38 T 22-04-2016 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 PANTHER PTHR23115 2 590 1.0E-256 T 22-04-2016 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 Pfam PF00679 Elongation factor G C-terminus 396 478 7.1E-18 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 Gene3D G3DSA:3.40.50.300 2 203 1.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 596 1.4E-285 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 Gene3D G3DSA:2.40.30.10 204 302 1.5E-26 T 22-04-2016 PGJ_RS06015 fcd4861a2e17284c0db46f15392c5139 599 Gene3D G3DSA:3.30.70.240 398 479 2.3E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PGJ_RS02160 24f4592c80a4fc3e1a82bbc7cb85eb51 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 349 3.4E-104 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS02160 24f4592c80a4fc3e1a82bbc7cb85eb51 350 PANTHER PTHR30307 2 349 3.0E-129 T 22-04-2016 PGJ_RS02160 24f4592c80a4fc3e1a82bbc7cb85eb51 350 SUPERFAMILY SSF111337 1 349 1.01E-113 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS02160 24f4592c80a4fc3e1a82bbc7cb85eb51 350 Gene3D G3DSA:2.40.10.240 64 143 3.3E-21 T 22-04-2016 PGJ_RS02160 24f4592c80a4fc3e1a82bbc7cb85eb51 350 PANTHER PTHR30307:SF0 2 349 3.0E-129 T 22-04-2016 PGJ_RS02160 24f4592c80a4fc3e1a82bbc7cb85eb51 350 Gene3D G3DSA:3.40.1780.10 186 349 1.2E-85 T 22-04-2016 PGJ_RS02160 24f4592c80a4fc3e1a82bbc7cb85eb51 350 Gene3D G3DSA:3.40.1780.10 1 62 1.2E-85 T 22-04-2016 PGJ_RS02160 24f4592c80a4fc3e1a82bbc7cb85eb51 350 Pfam PF02547 Queuosine biosynthesis protein 3 348 1.4E-122 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS02160 24f4592c80a4fc3e1a82bbc7cb85eb51 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 349 39.428 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS03710 80c57838a33a933f58e335a09aaf8f5d 118 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 118 70.288 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PGJ_RS03710 80c57838a33a933f58e335a09aaf8f5d 118 PANTHER PTHR21012 2 116 8.5E-61 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PGJ_RS03710 80c57838a33a933f58e335a09aaf8f5d 118 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 110 3.5E-51 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PGJ_RS03710 80c57838a33a933f58e335a09aaf8f5d 118 Gene3D G3DSA:2.40.40.20 1 112 3.9E-54 T 22-04-2016 PGJ_RS03710 80c57838a33a933f58e335a09aaf8f5d 118 PIRSF PIRSF006246 1 118 3.6E-49 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PGJ_RS03710 80c57838a33a933f58e335a09aaf8f5d 118 Pfam PF02261 Aspartate decarboxylase 1 112 2.0E-52 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PGJ_RS03710 80c57838a33a933f58e335a09aaf8f5d 118 SUPERFAMILY SSF50692 1 111 8.08E-48 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain PGJ_RS03710 80c57838a33a933f58e335a09aaf8f5d 118 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 94 8.0E-47 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PGJ_RS03710 80c57838a33a933f58e335a09aaf8f5d 118 PANTHER PTHR21012:SF0 2 116 8.5E-61 T 22-04-2016 PGJ_RS01950 683f4002f0f1fecb5284b748632bc65a 331 Gene3D G3DSA:1.10.8.300 211 328 1.0E-41 T 22-04-2016 PGJ_RS01950 683f4002f0f1fecb5284b748632bc65a 331 PANTHER PTHR11603 1 331 2.6E-145 T 22-04-2016 PGJ_RS01950 683f4002f0f1fecb5284b748632bc65a 331 PIRSF PIRSF002849 2 331 1.5E-133 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted PGJ_RS01950 683f4002f0f1fecb5284b748632bc65a 331 PANTHER PTHR11603:SF148 1 331 2.6E-145 T 22-04-2016 PGJ_RS01950 683f4002f0f1fecb5284b748632bc65a 331 Gene3D G3DSA:3.40.50.300 33 197 4.4E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01950 683f4002f0f1fecb5284b748632bc65a 331 SUPERFAMILY SSF52540 27 307 7.25E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01950 683f4002f0f1fecb5284b748632bc65a 331 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 51 181 6.4E-66 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PGJ_RS01470 bd89166354ab3f2b43e0bccbe78a926c 898 Gene3D G3DSA:3.90.199.10 334 386 1.3E-57 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PGJ_RS01470 bd89166354ab3f2b43e0bccbe78a926c 898 Gene3D G3DSA:3.90.199.10 57 251 1.3E-57 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PGJ_RS01470 bd89166354ab3f2b43e0bccbe78a926c 898 PANTHER PTHR10169:SF48 44 676 1.5E-114 T 22-04-2016 PGJ_RS01470 bd89166354ab3f2b43e0bccbe78a926c 898 SMART SM00434 37 474 1.1E-67 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS01470 bd89166354ab3f2b43e0bccbe78a926c 898 SUPERFAMILY SSF56719 35 496 8.24E-103 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PGJ_RS01470 bd89166354ab3f2b43e0bccbe78a926c 898 PANTHER PTHR10169 44 676 1.5E-114 T 22-04-2016 PGJ_RS01470 bd89166354ab3f2b43e0bccbe78a926c 898 Gene3D G3DSA:3.30.1360.40 252 321 6.0E-12 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain PGJ_RS01470 bd89166354ab3f2b43e0bccbe78a926c 898 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 58 477 4.3E-105 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS00720 c1c32081d99b8452e61973f54fcd88e9 293 PANTHER PTHR18895 1 287 3.0E-66 T 22-04-2016 PGJ_RS00720 c1c32081d99b8452e61973f54fcd88e9 293 SUPERFAMILY SSF53335 31 271 4.37E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS00720 c1c32081d99b8452e61973f54fcd88e9 293 Pfam PF13649 Methyltransferase domain 121 190 4.4E-9 T 22-04-2016 PGJ_RS00720 c1c32081d99b8452e61973f54fcd88e9 293 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 188 194 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PGJ_RS00720 c1c32081d99b8452e61973f54fcd88e9 293 Gene3D G3DSA:3.40.50.150 90 286 6.2E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS00720 c1c32081d99b8452e61973f54fcd88e9 293 PANTHER PTHR18895:SF64 1 287 3.0E-66 T 22-04-2016 PGJ_RS00720 c1c32081d99b8452e61973f54fcd88e9 293 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 31 283 2.4E-62 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PGJ_RS00720 c1c32081d99b8452e61973f54fcd88e9 293 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 286 4.1E-49 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PGJ_RS00720 c1c32081d99b8452e61973f54fcd88e9 293 Gene3D G3DSA:1.10.8.10 3 89 1.6E-13 T 22-04-2016 PGJ_RS00895 e224d8919e401a298ade6f26e023c5dc 192 Pfam PF02915 Rubrerythrin 14 140 6.7E-30 T 22-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 PGJ_RS00895 e224d8919e401a298ade6f26e023c5dc 192 Gene3D G3DSA:1.20.1260.10 3 145 1.0E-57 T 22-04-2016 IPR012347 Ferritin-related PGJ_RS00895 e224d8919e401a298ade6f26e023c5dc 192 SUPERFAMILY SSF57802 149 191 2.83E-11 T 22-04-2016 PGJ_RS00895 e224d8919e401a298ade6f26e023c5dc 192 PANTHER PTHR33746 1 192 3.6E-102 T 22-04-2016 PGJ_RS00895 e224d8919e401a298ade6f26e023c5dc 192 Gene3D G3DSA:2.20.28.10 148 192 3.5E-17 T 22-04-2016 IPR004039 Rubredoxin-type fold PGJ_RS00895 e224d8919e401a298ade6f26e023c5dc 192 PANTHER PTHR33746:SF1 1 192 3.6E-102 T 22-04-2016 PGJ_RS00895 e224d8919e401a298ade6f26e023c5dc 192 SUPERFAMILY SSF47240 6 148 4.79E-42 T 22-04-2016 IPR009078 Ferritin-like superfamily PGJ_RS00090 1e91f4184b48e203e6e5ab629fc12acb 558 TIGRFAM TIGR00815 sulP: sulfate permease 12 547 1.9E-114 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PGJ_RS00090 1e91f4184b48e203e6e5ab629fc12acb 558 PANTHER PTHR11814 17 554 9.9E-255 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PGJ_RS00090 1e91f4184b48e203e6e5ab629fc12acb 558 Gene3D G3DSA:3.30.750.24 446 551 6.1E-17 T 22-04-2016 IPR002645 STAS domain PGJ_RS00090 1e91f4184b48e203e6e5ab629fc12acb 558 PANTHER PTHR11814:SF112 17 554 9.9E-255 T 22-04-2016 PGJ_RS00090 1e91f4184b48e203e6e5ab629fc12acb 558 Pfam PF01740 STAS domain 446 547 8.1E-15 T 22-04-2016 IPR002645 STAS domain PGJ_RS00090 1e91f4184b48e203e6e5ab629fc12acb 558 Pfam PF00916 Sulfate permease family 22 388 3.4E-84 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PGJ_RS00090 1e91f4184b48e203e6e5ab629fc12acb 558 SUPERFAMILY SSF52091 445 551 4.51E-19 T 22-04-2016 IPR002645 STAS domain PGJ_RS03925 cc1e0135807cd7c0644690aa55bc7c14 498 SUPERFAMILY SSF52540 10 246 3.82E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03925 cc1e0135807cd7c0644690aa55bc7c14 498 SUPERFAMILY SSF52317 272 432 2.44E-35 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS03925 cc1e0135807cd7c0644690aa55bc7c14 498 SUPERFAMILY SSF52317 199 245 2.44E-35 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS03925 cc1e0135807cd7c0644690aa55bc7c14 498 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 260 445 3.9E-50 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 PGJ_RS03925 cc1e0135807cd7c0644690aa55bc7c14 498 PANTHER PTHR21343:SF1 8 494 2.1E-178 T 22-04-2016 PGJ_RS03925 cc1e0135807cd7c0644690aa55bc7c14 498 Gene3D G3DSA:3.40.50.300 9 245 7.2E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03925 cc1e0135807cd7c0644690aa55bc7c14 498 Gene3D G3DSA:3.40.50.880 259 447 5.2E-28 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS03925 cc1e0135807cd7c0644690aa55bc7c14 498 PANTHER PTHR21343 8 494 2.1E-178 T 22-04-2016 PGJ_RS03925 cc1e0135807cd7c0644690aa55bc7c14 498 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 497 166.808 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 PGJ_RS03925 cc1e0135807cd7c0644690aa55bc7c14 498 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 237 2.3E-23 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PGJ_RS03925 cc1e0135807cd7c0644690aa55bc7c14 498 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 10 483 2.6E-141 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 SMART SM01065 132 228 1.2E-14 T 22-04-2016 IPR002044 Carbohydrate binding module family 20 GO:2001070 PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 SMART SM01065 2 92 5.9E-4 T 22-04-2016 IPR002044 Carbohydrate binding module family 20 GO:2001070 PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 Gene3D G3DSA:3.20.20.80 240 563 1.1E-156 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 Gene3D G3DSA:3.20.20.80 706 896 1.1E-156 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 PANTHER PTHR32518:SF3 3 897 2.5E-278 T 22-04-2016 PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 Gene3D G3DSA:2.60.40.10 129 221 2.2E-17 T 22-04-2016 IPR013783 Immunoglobulin-like fold PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 Gene3D G3DSA:2.60.40.10 1 92 7.4E-17 T 22-04-2016 IPR013783 Immunoglobulin-like fold PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 Pfam PF00686 Starch binding domain 133 221 5.0E-12 T 22-04-2016 IPR002044 Carbohydrate binding module family 20 GO:2001070 PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 Pfam PF00686 Starch binding domain 2 78 1.1E-10 T 22-04-2016 IPR002044 Carbohydrate binding module family 20 GO:2001070 PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 Pfam PF02446 4-alpha-glucanotransferase 248 871 7.3E-147 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 SUPERFAMILY SSF49452 2 97 1.69E-15 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 PANTHER PTHR32518 3 897 2.5E-278 T 22-04-2016 PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 SUPERFAMILY SSF51445 242 561 1.5E-131 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 SUPERFAMILY SSF51445 704 884 1.5E-131 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS05095 94f21aed5f93ae5608a48b52f8c2a3d2 897 SUPERFAMILY SSF49452 130 224 1.77E-18 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 SMART SM00028 228 261 140.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 SMART SM00028 491 524 0.061 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 SMART SM00028 629 662 0.0016 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 SMART SM00028 583 616 0.0012 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 SMART SM00028 445 478 2.4E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 SMART SM00028 264 294 340.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 SMART SM00028 537 570 0.023 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 SMART SM00028 399 432 0.49 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 SMART SM00028 307 340 0.013 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 SMART SM00028 353 386 1.2E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 Gene3D G3DSA:1.25.40.10 220 349 6.3E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 SUPERFAMILY SSF48452 238 638 5.96E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 PANTHER PTHR19959:SF162 86 97 5.8E-64 T 22-04-2016 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 PANTHER PTHR19959:SF162 263 659 5.8E-64 T 22-04-2016 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 Pfam PF13374 Tetratricopeptide repeat 582 617 2.1E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 Pfam PF13374 Tetratricopeptide repeat 490 524 1.1E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 Pfam PF13374 Tetratricopeptide repeat 352 388 7.5E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 Pfam PF13374 Tetratricopeptide repeat 536 571 2.8E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 Pfam PF13374 Tetratricopeptide repeat 629 662 2.3E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 Gene3D G3DSA:1.25.40.10 350 704 6.8E-48 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 PANTHER PTHR19959 86 97 5.8E-64 T 22-04-2016 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 PANTHER PTHR19959 263 659 5.8E-64 T 22-04-2016 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 Pfam PF13424 Tetratricopeptide repeat 268 339 8.9E-9 T 22-04-2016 PGJ_RS03785 9096940e2ad47f28f72b8cb6db932625 725 Pfam PF13424 Tetratricopeptide repeat 398 477 3.9E-10 T 22-04-2016 PGJ_RS01725 0c2d732e9f1e0fccfea6c760c8ffcaaa 602 SUPERFAMILY SSF52317 36 267 1.3E-37 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS01725 0c2d732e9f1e0fccfea6c760c8ffcaaa 602 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 277 593 4.1E-104 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PGJ_RS01725 0c2d732e9f1e0fccfea6c760c8ffcaaa 602 Gene3D G3DSA:3.40.50.880 36 284 7.3E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS01725 0c2d732e9f1e0fccfea6c760c8ffcaaa 602 Gene3D G3DSA:3.20.20.140 285 599 8.5E-112 T 22-04-2016 PGJ_RS01725 0c2d732e9f1e0fccfea6c760c8ffcaaa 602 Pfam PF07722 Peptidase C26 37 247 2.4E-62 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 PGJ_RS01725 0c2d732e9f1e0fccfea6c760c8ffcaaa 602 SUPERFAMILY SSF51556 271 596 1.25E-83 T 22-04-2016 IPR032466 Metal-dependent hydrolase PGJ_RS01725 0c2d732e9f1e0fccfea6c760c8ffcaaa 602 PANTHER PTHR10443 269 597 4.5E-96 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PGJ_RS06120 d5820d9129a18712ba0bdc32ad1477b6 149 PANTHER PTHR28055:SF1 1 149 2.8E-40 T 22-04-2016 PGJ_RS06120 d5820d9129a18712ba0bdc32ad1477b6 149 SUPERFAMILY SSF89095 1 149 4.66E-38 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 PGJ_RS06120 d5820d9129a18712ba0bdc32ad1477b6 149 Gene3D G3DSA:1.10.1510.10 2 92 7.6E-26 T 22-04-2016 PGJ_RS06120 d5820d9129a18712ba0bdc32ad1477b6 149 Pfam PF09424 Yqey-like protein 6 148 8.7E-47 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial PGJ_RS06120 d5820d9129a18712ba0bdc32ad1477b6 149 PANTHER PTHR28055 1 149 2.8E-40 T 22-04-2016 PGJ_RS06120 d5820d9129a18712ba0bdc32ad1477b6 149 Gene3D G3DSA:1.10.10.410 93 149 1.6E-20 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal PGJ_RS00925 671e6b4d2867d60f5519063cbe277e2e 235 Pfam PF14093 Domain of unknown function (DUF4271) 17 220 3.2E-31 T 22-04-2016 IPR025367 Protein of unknown function DUF4271 PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 Pfam PF07664 Ferrous iron transport protein B C terminus 501 550 4.1E-12 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 PANTHER PTHR11649 22 176 7.3E-148 T 22-04-2016 PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 PANTHER PTHR11649 299 722 7.3E-148 T 22-04-2016 PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 Pfam PF07670 Nucleoside recognition 389 474 7.6E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 Pfam PF07670 Nucleoside recognition 559 693 9.3E-12 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 Pfam PF02421 Ferrous iron transport protein B 35 188 4.7E-59 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 PANTHER PTHR11649:SF37 22 176 7.3E-148 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 PANTHER PTHR11649:SF37 299 722 7.3E-148 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 SUPERFAMILY SSF52540 34 197 1.65E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 36 56 2.3E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 84 99 2.3E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 40 690 9.2E-112 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PGJ_RS04060 12a087aed474889b84d91f4cd2e30ebc 724 Gene3D G3DSA:3.40.50.300 33 194 1.8E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04825 2191d02d4757f18e972bf653232ea998 942 SUPERFAMILY SSF52540 242 407 8.97E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04825 2191d02d4757f18e972bf653232ea998 942 PANTHER PTHR30195 18 907 0.0 T 22-04-2016 PGJ_RS04825 2191d02d4757f18e972bf653232ea998 942 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 9 656 1.9E-135 T 22-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 PGJ_RS04825 2191d02d4757f18e972bf653232ea998 942 SMART SM00487 239 444 5.1E-16 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PGJ_RS04825 2191d02d4757f18e972bf653232ea998 942 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 188 1.4E-33 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 PGJ_RS04825 2191d02d4757f18e972bf653232ea998 942 PANTHER PTHR30195:SF16 18 907 0.0 T 22-04-2016 PGJ_RS04825 2191d02d4757f18e972bf653232ea998 942 Pfam PF04851 Type III restriction enzyme, res subunit 241 404 4.8E-36 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PGJ_RS04825 2191d02d4757f18e972bf653232ea998 942 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 662 939 4.8E-65 T 22-04-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal PGJ_RS04825 2191d02d4757f18e972bf653232ea998 942 Gene3D G3DSA:3.40.50.300 237 407 8.1E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04260 e8fe98aaefe0a892c71b46e4655a9b90 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS04260 e8fe98aaefe0a892c71b46e4655a9b90 65 PANTHER PTHR33343 1 62 3.2E-24 T 22-04-2016 PGJ_RS04260 e8fe98aaefe0a892c71b46e4655a9b90 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 1.4E-26 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PGJ_RS04260 e8fe98aaefe0a892c71b46e4655a9b90 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.05 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PGJ_RS04260 e8fe98aaefe0a892c71b46e4655a9b90 65 Pfam PF01632 Ribosomal protein L35 2 62 5.7E-25 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS04260 e8fe98aaefe0a892c71b46e4655a9b90 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.6E-18 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PGJ_RS04260 e8fe98aaefe0a892c71b46e4655a9b90 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.6E-18 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PGJ_RS04260 e8fe98aaefe0a892c71b46e4655a9b90 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.6E-18 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PGJ_RS04260 e8fe98aaefe0a892c71b46e4655a9b90 65 SUPERFAMILY SSF143034 2 63 2.62E-22 T 22-04-2016 PGJ_RS07550 b351e00da417c5d102eb4511fe7e625f 376 PANTHER PTHR11601 4 375 8.6E-75 T 22-04-2016 PGJ_RS07550 b351e00da417c5d102eb4511fe7e625f 376 PANTHER PTHR11601:SF43 4 375 8.6E-75 T 22-04-2016 PGJ_RS07550 b351e00da417c5d102eb4511fe7e625f 376 Pfam PF00266 Aminotransferase class-V 4 366 1.7E-56 T 22-04-2016 IPR000192 Aminotransferase class V domain PGJ_RS07550 b351e00da417c5d102eb4511fe7e625f 376 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 3 373 1.4E-152 T 22-04-2016 IPR010969 Cysteine desulfurase-related, unknown function PGJ_RS07550 b351e00da417c5d102eb4511fe7e625f 376 SUPERFAMILY SSF53383 3 375 2.3E-69 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS07550 b351e00da417c5d102eb4511fe7e625f 376 Gene3D G3DSA:3.90.1150.10 252 375 5.9E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS07550 b351e00da417c5d102eb4511fe7e625f 376 Gene3D G3DSA:3.40.640.10 16 251 3.1E-53 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS00345 6f05f59d786e771a13e8aa5f18190ac2 661 Pfam PF13620 Carboxypeptidase regulatory-like domain 146 209 1.5E-7 T 22-04-2016 PGJ_RS00345 6f05f59d786e771a13e8aa5f18190ac2 661 SUPERFAMILY SSF49452 145 210 1.22E-6 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 PGJ_RS00345 6f05f59d786e771a13e8aa5f18190ac2 661 Gene3D G3DSA:2.60.40.1120 147 208 4.3E-6 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS00345 6f05f59d786e771a13e8aa5f18190ac2 661 Pfam PF13205 Bacterial Ig-like domain 39 138 6.1E-18 T 22-04-2016 IPR032812 SbsA, Ig-like domain PGJ_RS07560 bf2be0ccfca213eb3f47acc651c36e1a 348 Gene3D G3DSA:3.30.1330.10 43 161 1.4E-27 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PGJ_RS07560 bf2be0ccfca213eb3f47acc651c36e1a 348 Gene3D G3DSA:3.90.650.10 174 344 3.9E-18 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS07560 bf2be0ccfca213eb3f47acc651c36e1a 348 PANTHER PTHR10256 5 346 3.4E-103 T 22-04-2016 PGJ_RS07560 bf2be0ccfca213eb3f47acc651c36e1a 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 58 156 1.9E-18 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PGJ_RS07560 bf2be0ccfca213eb3f47acc651c36e1a 348 TIGRFAM TIGR00476 selD: selenide, water dikinase 10 313 1.0E-109 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PGJ_RS07560 bf2be0ccfca213eb3f47acc651c36e1a 348 SUPERFAMILY SSF55326 8 160 3.4E-39 T 22-04-2016 PGJ_RS07560 bf2be0ccfca213eb3f47acc651c36e1a 348 SUPERFAMILY SSF56042 162 341 1.09E-47 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS07560 bf2be0ccfca213eb3f47acc651c36e1a 348 PIRSF PIRSF036407 1 348 1.0E-119 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PGJ_RS07560 bf2be0ccfca213eb3f47acc651c36e1a 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 168 341 8.2E-25 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS07560 bf2be0ccfca213eb3f47acc651c36e1a 348 Hamap MF_00625 Selenide, water dikinase [selD]. 5 348 43.52 T 22-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PGJ_RS06630 17fb24c0b4c6ca259b4f6de98fee8fae 237 PANTHER PTHR21091 9 178 4.4E-15 T 22-04-2016 PGJ_RS06630 17fb24c0b4c6ca259b4f6de98fee8fae 237 PIRSF PIRSF036427 3 237 1.8E-59 T 22-04-2016 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 PGJ_RS06630 17fb24c0b4c6ca259b4f6de98fee8fae 237 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 212 7.8E-34 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PGJ_RS06630 17fb24c0b4c6ca259b4f6de98fee8fae 237 PANTHER PTHR21091:SF118 9 178 4.4E-15 T 22-04-2016 PGJ_RS06630 17fb24c0b4c6ca259b4f6de98fee8fae 237 Gene3D G3DSA:3.40.1010.10 6 132 4.5E-22 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PGJ_RS06630 17fb24c0b4c6ca259b4f6de98fee8fae 237 SUPERFAMILY SSF53790 5 234 1.11E-36 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PGJ_RS05845 1e8c52cc9dbc9d23ec41f56af12f0c18 183 TIGRFAM TIGR00277 HDIG: HDIG domain 22 95 8.6E-10 T 22-04-2016 IPR006675 HDIG domain PGJ_RS05845 1e8c52cc9dbc9d23ec41f56af12f0c18 183 Pfam PF01966 HD domain 23 141 9.2E-11 T 22-04-2016 IPR006674 HD domain PGJ_RS05845 1e8c52cc9dbc9d23ec41f56af12f0c18 183 SUPERFAMILY SSF109604 17 142 2.15E-16 T 22-04-2016 PGJ_RS05845 1e8c52cc9dbc9d23ec41f56af12f0c18 183 Gene3D G3DSA:1.10.3210.10 20 159 6.3E-16 T 22-04-2016 IPR006674 HD domain PGJ_RS06225 4fbe27057d4295fd854a1e56f56b305f 273 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 24 271 5.1E-127 T 22-04-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 PGJ_RS06225 4fbe27057d4295fd854a1e56f56b305f 273 PANTHER PTHR11904:SF9 1 273 9.3E-120 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 PGJ_RS06225 4fbe27057d4295fd854a1e56f56b305f 273 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 25 270 1.8E-112 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 PGJ_RS06225 4fbe27057d4295fd854a1e56f56b305f 273 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 77 118 - T 22-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 PGJ_RS06225 4fbe27057d4295fd854a1e56f56b305f 273 PANTHER PTHR11904 1 273 9.3E-120 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase PGJ_RS06225 4fbe27057d4295fd854a1e56f56b305f 273 SUPERFAMILY SSF53167 6 271 1.7E-85 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PGJ_RS06225 4fbe27057d4295fd854a1e56f56b305f 273 Pfam PF01048 Phosphorylase superfamily 25 270 1.8E-46 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PGJ_RS06225 4fbe27057d4295fd854a1e56f56b305f 273 Gene3D G3DSA:3.40.50.1580 6 271 5.3E-96 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PGJ_RS06225 4fbe27057d4295fd854a1e56f56b305f 273 PIRSF PIRSF000477 1 273 2.4E-98 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 PGJ_RS09060 96ba8038d2ea099a380c3442f518197f 850 SUPERFAMILY SSF55486 216 505 2.45E-31 T 22-04-2016 PGJ_RS09060 96ba8038d2ea099a380c3442f518197f 850 Gene3D G3DSA:3.40.390.10 224 506 8.5E-19 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PGJ_RS09060 96ba8038d2ea099a380c3442f518197f 850 Pfam PF17148 Domain of unknown function (DUF5117) 93 279 3.0E-49 T 22-04-2016 IPR033413 Domain of unknown function DUF5117 PGJ_RS09060 96ba8038d2ea099a380c3442f518197f 850 Pfam PF17162 Domain of unknown function (DUF5118) 35 84 1.7E-11 T 22-04-2016 IPR033428 Domain of unknown function DUF5118 PGJ_RS09060 96ba8038d2ea099a380c3442f518197f 850 Pfam PF16313 Met-zincin 412 719 1.1E-98 T 22-04-2016 IPR032534 Domian of unknown function DUF4953 PGJ_RS09060 96ba8038d2ea099a380c3442f518197f 850 PANTHER PTHR38478 40 850 2.5E-155 T 22-04-2016 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 PANTHER PTHR32063:SF0 1 1030 0.0 T 22-04-2016 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 SUPERFAMILY SSF82866 288 488 4.45E-44 T 22-04-2016 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 PANTHER PTHR32063 1 1030 0.0 T 22-04-2016 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 Gene3D G3DSA:3.30.70.1430 41 140 4.1E-29 T 22-04-2016 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 SUPERFAMILY SSF82693 40 134 2.35E-25 T 22-04-2016 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 1.7E-51 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 1.7E-51 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 1.7E-51 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 1.7E-51 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 1.7E-51 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-51 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.7E-51 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-51 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 Gene3D G3DSA:3.30.2090.10 181 263 2.5E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 Gene3D G3DSA:3.30.2090.10 715 799 6.7E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 Gene3D G3DSA:1.10.3850.10 806 1021 6.1E-64 T 22-04-2016 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 SUPERFAMILY SSF82693 136 180 9.68E-16 T 22-04-2016 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 SUPERFAMILY SSF82693 266 322 9.68E-16 T 22-04-2016 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 SUPERFAMILY SSF82714 715 799 1.27E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 SUPERFAMILY SSF82693 557 662 5.93E-8 T 22-04-2016 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 SUPERFAMILY SSF82866 798 1021 4.58E-52 T 22-04-2016 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 SUPERFAMILY SSF82714 181 263 1.96E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 Gene3D G3DSA:1.20.1640.10 283 498 4.6E-56 T 22-04-2016 PGJ_RS06295 bbb1418d3370fdc579f4046d50a79164 1049 Pfam PF00873 AcrB/AcrD/AcrF family 4 1020 3.6E-261 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 SUPERFAMILY SSF52374 4 149 2.52E-37 T 22-04-2016 PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 Gene3D G3DSA:3.40.50.620 1 148 4.1E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 PANTHER PTHR21342:SF1 1 148 4.1E-57 T 22-04-2016 PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 58 2.0E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 148 8.6E-50 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 PANTHER PTHR21342 1 148 4.1E-57 T 22-04-2016 PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 4.17E-33 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 4.17E-33 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 4.17E-33 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 4.17E-33 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 4.17E-33 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 153 27.09 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PGJ_RS07130 40abeb8eb4e9c8e9700f4fdcf057f159 153 Pfam PF01467 Cytidylyltransferase-like 7 134 2.8E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PGJ_RS05410 60fa256938df639d46b265d88dfe251a 391 PANTHER PTHR30128:SF17 41 387 8.7E-30 T 22-04-2016 PGJ_RS05410 60fa256938df639d46b265d88dfe251a 391 SUPERFAMILY SSF103088 286 384 2.62E-21 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS05410 60fa256938df639d46b265d88dfe251a 391 Pfam PF00691 OmpA family 295 380 7.0E-15 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS05410 60fa256938df639d46b265d88dfe251a 391 ProSitePatterns PS01068 OmpA-like domain. 326 371 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PGJ_RS05410 60fa256938df639d46b265d88dfe251a 391 Gene3D G3DSA:3.30.1330.60 274 374 3.6E-22 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS05410 60fa256938df639d46b265d88dfe251a 391 PRINTS PR01021 OMPA domain signature 295 317 4.4E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PGJ_RS05410 60fa256938df639d46b265d88dfe251a 391 PRINTS PR01021 OMPA domain signature 324 339 4.4E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PGJ_RS05410 60fa256938df639d46b265d88dfe251a 391 PRINTS PR01021 OMPA domain signature 339 355 4.4E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PGJ_RS05410 60fa256938df639d46b265d88dfe251a 391 PANTHER PTHR30128 41 387 8.7E-30 T 22-04-2016 PGJ_RS01310 4f1f9995e49e499d460035fbbd8ead70 472 Gene3D G3DSA:2.30.42.10 47 112 7.6E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS01310 4f1f9995e49e499d460035fbbd8ead70 472 Gene3D G3DSA:2.30.42.10 336 368 1.4E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS01310 4f1f9995e49e499d460035fbbd8ead70 472 SMART SM00228 323 388 0.0042 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS01310 4f1f9995e49e499d460035fbbd8ead70 472 SMART SM00228 32 107 4.1E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS01310 4f1f9995e49e499d460035fbbd8ead70 472 SUPERFAMILY SSF50156 43 105 3.42E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS01310 4f1f9995e49e499d460035fbbd8ead70 472 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 30 93 5.1E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS01310 4f1f9995e49e499d460035fbbd8ead70 472 Pfam PF13590 Domain of unknown function (DUF4136) 153 305 1.5E-12 T 22-04-2016 IPR025411 Domain of unknown function DUF4136 PGJ_RS01310 4f1f9995e49e499d460035fbbd8ead70 472 Pfam PF13180 PDZ domain 335 369 6.2E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS01310 4f1f9995e49e499d460035fbbd8ead70 472 SUPERFAMILY SSF50156 321 368 2.5E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS07235 256809a8cb3f59792e403e99e63280fd 489 PANTHER PTHR22953:SF0 20 371 3.4E-38 T 22-04-2016 PGJ_RS07235 256809a8cb3f59792e403e99e63280fd 489 SUPERFAMILY SSF56300 179 441 4.27E-42 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS07235 256809a8cb3f59792e403e99e63280fd 489 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 77 169 8.5E-13 T 22-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 PGJ_RS07235 256809a8cb3f59792e403e99e63280fd 489 Gene3D G3DSA:2.60.40.380 80 172 8.5E-7 T 22-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 PGJ_RS07235 256809a8cb3f59792e403e99e63280fd 489 PANTHER PTHR22953 20 371 3.4E-38 T 22-04-2016 PGJ_RS07235 256809a8cb3f59792e403e99e63280fd 489 Pfam PF00149 Calcineurin-like phosphoesterase 180 367 7.2E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PGJ_RS07235 256809a8cb3f59792e403e99e63280fd 489 Gene3D G3DSA:3.60.21.10 176 446 3.6E-49 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS07235 256809a8cb3f59792e403e99e63280fd 489 SUPERFAMILY SSF49363 76 168 4.05E-8 T 22-04-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 PGJ_RS05065 aea05e9e0b6a91304de30c9d0c1ed33c 339 Pfam PF01012 Electron transfer flavoprotein domain 7 193 2.1E-39 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PGJ_RS05065 aea05e9e0b6a91304de30c9d0c1ed33c 339 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 215 297 1.7E-34 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal PGJ_RS05065 aea05e9e0b6a91304de30c9d0c1ed33c 339 Gene3D G3DSA:3.40.50.1220 210 334 1.4E-51 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS05065 aea05e9e0b6a91304de30c9d0c1ed33c 339 SUPERFAMILY SSF52402 3 194 1.81E-45 T 22-04-2016 PGJ_RS05065 aea05e9e0b6a91304de30c9d0c1ed33c 339 Gene3D G3DSA:3.40.50.620 3 196 3.9E-60 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS05065 aea05e9e0b6a91304de30c9d0c1ed33c 339 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 278 304 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site PGJ_RS05065 aea05e9e0b6a91304de30c9d0c1ed33c 339 PANTHER PTHR10909 145 331 5.3E-40 T 22-04-2016 PGJ_RS05065 aea05e9e0b6a91304de30c9d0c1ed33c 339 PANTHER PTHR10909:SF294 145 331 5.3E-40 T 22-04-2016 PGJ_RS05065 aea05e9e0b6a91304de30c9d0c1ed33c 339 PIRSF PIRSF000089 1 339 1.4E-105 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 PGJ_RS05065 aea05e9e0b6a91304de30c9d0c1ed33c 339 SUPERFAMILY SSF52467 215 332 7.36E-44 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS05065 aea05e9e0b6a91304de30c9d0c1ed33c 339 SMART SM00893 4 204 1.6E-35 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PGJ_RS06115 b6bdf64de79eb40d008cae0f5177932b 210 PANTHER PTHR30506:SF3 6 207 9.1E-75 T 22-04-2016 PGJ_RS06115 b6bdf64de79eb40d008cae0f5177932b 210 PANTHER PTHR30506 6 207 9.1E-75 T 22-04-2016 PGJ_RS06115 b6bdf64de79eb40d008cae0f5177932b 210 Pfam PF03458 UPF0126 domain 98 171 2.1E-20 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 PGJ_RS06115 b6bdf64de79eb40d008cae0f5177932b 210 Pfam PF03458 UPF0126 domain 14 87 1.9E-23 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 PGJ_RS03700 55bbde8e0b24f85d5f396ea6194cce78 485 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 3 48 5.4E-12 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PGJ_RS03700 55bbde8e0b24f85d5f396ea6194cce78 485 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 463 470 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PGJ_RS03700 55bbde8e0b24f85d5f396ea6194cce78 485 PANTHER PTHR32248 1 485 3.8E-121 T 22-04-2016 PGJ_RS03700 55bbde8e0b24f85d5f396ea6194cce78 485 Pfam PF04552 Sigma-54, DNA binding domain 325 482 5.1E-49 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding PGJ_RS03700 55bbde8e0b24f85d5f396ea6194cce78 485 PRINTS PR00045 Sigma-54 factor signature 384 396 3.0E-22 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PGJ_RS03700 55bbde8e0b24f85d5f396ea6194cce78 485 PRINTS PR00045 Sigma-54 factor signature 400 411 3.0E-22 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PGJ_RS03700 55bbde8e0b24f85d5f396ea6194cce78 485 PRINTS PR00045 Sigma-54 factor signature 458 476 3.0E-22 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PGJ_RS03700 55bbde8e0b24f85d5f396ea6194cce78 485 PRINTS PR00045 Sigma-54 factor signature 181 198 3.0E-22 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PGJ_RS03700 55bbde8e0b24f85d5f396ea6194cce78 485 Pfam PF04963 Sigma-54 factor, core binding domain 106 301 5.4E-47 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 PGJ_RS03700 55bbde8e0b24f85d5f396ea6194cce78 485 PANTHER PTHR32248:SF4 1 485 3.8E-121 T 22-04-2016 PGJ_RS03700 55bbde8e0b24f85d5f396ea6194cce78 485 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 8 482 1.7E-147 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PGJ_RS03700 55bbde8e0b24f85d5f396ea6194cce78 485 PIRSF PIRSF000774 1 485 3.3E-158 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PGJ_RS08265 416101545d21c36d0210578fc79a6dbb 201 SUPERFAMILY SSF55174 2 201 3.66E-65 T 22-04-2016 PGJ_RS08265 416101545d21c36d0210578fc79a6dbb 201 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 PGJ_RS08265 416101545d21c36d0210578fc79a6dbb 201 SMART SM00363 92 156 2.8E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS08265 416101545d21c36d0210578fc79a6dbb 201 Gene3D G3DSA:3.10.290.10 99 185 2.0E-29 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS08265 416101545d21c36d0210578fc79a6dbb 201 PANTHER PTHR11831:SF4 1 201 6.1E-80 T 22-04-2016 PGJ_RS08265 416101545d21c36d0210578fc79a6dbb 201 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 91 2.0E-26 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 PGJ_RS08265 416101545d21c36d0210578fc79a6dbb 201 SMART SM01390 3 91 2.5E-45 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 PGJ_RS08265 416101545d21c36d0210578fc79a6dbb 201 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 1.6E-75 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PGJ_RS08265 416101545d21c36d0210578fc79a6dbb 201 Gene3D G3DSA:1.10.1050.10 1 98 8.4E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 PGJ_RS08265 416101545d21c36d0210578fc79a6dbb 201 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 35.087 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PGJ_RS08265 416101545d21c36d0210578fc79a6dbb 201 PANTHER PTHR11831 1 201 6.1E-80 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 PGJ_RS08265 416101545d21c36d0210578fc79a6dbb 201 Pfam PF01479 S4 domain 93 139 2.4E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS06220 0045c6a9884b1b9b3efd78a36b9864f9 424 Gene3D G3DSA:3.20.20.140 59 330 2.6E-86 T 22-04-2016 PGJ_RS06220 0045c6a9884b1b9b3efd78a36b9864f9 424 PANTHER PTHR11271:SF7 16 417 5.0E-146 T 22-04-2016 PGJ_RS06220 0045c6a9884b1b9b3efd78a36b9864f9 424 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 2 416 40.309 T 22-04-2016 IPR023512 Deaminase MtaD/DadD GO:0019239 PGJ_RS06220 0045c6a9884b1b9b3efd78a36b9864f9 424 Pfam PF01979 Amidohydrolase family 46 391 2.4E-66 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PGJ_RS06220 0045c6a9884b1b9b3efd78a36b9864f9 424 Gene3D G3DSA:2.30.40.10 14 58 7.8E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PGJ_RS06220 0045c6a9884b1b9b3efd78a36b9864f9 424 SUPERFAMILY SSF51338 343 415 5.76E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PGJ_RS06220 0045c6a9884b1b9b3efd78a36b9864f9 424 SUPERFAMILY SSF51338 13 48 5.76E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PGJ_RS06220 0045c6a9884b1b9b3efd78a36b9864f9 424 Gene3D G3DSA:2.30.40.10 331 401 4.9E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PGJ_RS06220 0045c6a9884b1b9b3efd78a36b9864f9 424 SUPERFAMILY SSF51556 48 341 7.49E-90 T 22-04-2016 IPR032466 Metal-dependent hydrolase PGJ_RS06220 0045c6a9884b1b9b3efd78a36b9864f9 424 PANTHER PTHR11271 16 417 5.0E-146 T 22-04-2016 PGJ_RS04510 c7713121c1ab08fe2f5f6adc428d368b 388 Pfam PF13173 AAA domain 17 133 6.6E-23 T 22-04-2016 PGJ_RS04510 c7713121c1ab08fe2f5f6adc428d368b 388 PANTHER PTHR33295 1 345 1.4E-78 T 22-04-2016 PGJ_RS04510 c7713121c1ab08fe2f5f6adc428d368b 388 Pfam PF13635 Domain of unknown function (DUF4143) 175 334 3.8E-26 T 22-04-2016 IPR025420 Domain of unknown function DUF4143 PGJ_RS04510 c7713121c1ab08fe2f5f6adc428d368b 388 SUPERFAMILY SSF52980 247 360 2.65E-5 T 22-04-2016 IPR011335 Restriction endonuclease type II-like PGJ_RS04510 c7713121c1ab08fe2f5f6adc428d368b 388 SUPERFAMILY SSF52540 14 176 2.6E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04510 c7713121c1ab08fe2f5f6adc428d368b 388 PANTHER PTHR33295:SF5 1 345 1.4E-78 T 22-04-2016 PGJ_RS04510 c7713121c1ab08fe2f5f6adc428d368b 388 Gene3D G3DSA:3.40.50.300 15 47 5.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06700 be0fdb2ead51849b0b1a6d1769fc1473 423 PANTHER PTHR11846 1 423 1.1E-208 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PGJ_RS06700 be0fdb2ead51849b0b1a6d1769fc1473 423 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PGJ_RS06700 be0fdb2ead51849b0b1a6d1769fc1473 423 Gene3D G3DSA:3.40.440.10 193 264 2.1E-62 T 22-04-2016 PGJ_RS06700 be0fdb2ead51849b0b1a6d1769fc1473 423 Gene3D G3DSA:3.40.440.10 3 94 2.1E-62 T 22-04-2016 PGJ_RS06700 be0fdb2ead51849b0b1a6d1769fc1473 423 Gene3D G3DSA:1.10.300.10 103 192 8.4E-25 T 22-04-2016 PGJ_RS06700 be0fdb2ead51849b0b1a6d1769fc1473 423 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 PGJ_RS06700 be0fdb2ead51849b0b1a6d1769fc1473 423 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 423 167.571 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PGJ_RS06700 be0fdb2ead51849b0b1a6d1769fc1473 423 Gene3D G3DSA:3.90.170.10 265 421 1.1E-62 T 22-04-2016 PGJ_RS06700 be0fdb2ead51849b0b1a6d1769fc1473 423 SMART SM00788 4 420 1.0E-243 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PGJ_RS06700 be0fdb2ead51849b0b1a6d1769fc1473 423 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 420 1.5E-150 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PGJ_RS06700 be0fdb2ead51849b0b1a6d1769fc1473 423 Pfam PF00709 Adenylosuccinate synthetase 6 419 8.3E-161 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PGJ_RS06700 be0fdb2ead51849b0b1a6d1769fc1473 423 SUPERFAMILY SSF52540 3 421 3.4E-153 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03615 ee9d34247e3abd03a2c5c6495c412f3c 187 Pfam PF13508 Acetyltransferase (GNAT) domain 67 139 3.3E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 PGJ_RS03615 ee9d34247e3abd03a2c5c6495c412f3c 187 SUPERFAMILY SSF55729 20 164 2.7E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS03615 ee9d34247e3abd03a2c5c6495c412f3c 187 Gene3D G3DSA:3.40.630.30 17 165 2.9E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS02655 3e1e75037129a59c1a15a22704c31fc2 189 PANTHER PTHR30194 1 177 3.7E-62 T 22-04-2016 PGJ_RS02655 3e1e75037129a59c1a15a22704c31fc2 189 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 8 158 7.6E-41 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PGJ_RS02655 3e1e75037129a59c1a15a22704c31fc2 189 SUPERFAMILY SSF53098 7 163 1.71E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS02655 3e1e75037129a59c1a15a22704c31fc2 189 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 8 159 1.9E-40 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PGJ_RS02655 3e1e75037129a59c1a15a22704c31fc2 189 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 9 22 2.8E-23 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PGJ_RS02655 3e1e75037129a59c1a15a22704c31fc2 189 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 112 131 2.8E-23 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PGJ_RS02655 3e1e75037129a59c1a15a22704c31fc2 189 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 66 82 2.8E-23 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PGJ_RS02655 3e1e75037129a59c1a15a22704c31fc2 189 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 88 104 2.8E-23 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PGJ_RS02655 3e1e75037129a59c1a15a22704c31fc2 189 Gene3D G3DSA:3.30.420.10 7 163 4.5E-53 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS02655 3e1e75037129a59c1a15a22704c31fc2 189 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 6 161 38.509 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PGJ_RS02655 3e1e75037129a59c1a15a22704c31fc2 189 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 118 155 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 PGJ_RS07220 6f79d537d655cc38dbb844e2e36fc634 342 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 269 6.8E-49 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PGJ_RS07220 6f79d537d655cc38dbb844e2e36fc634 342 PANTHER PTHR10366 4 338 2.7E-125 T 22-04-2016 PGJ_RS07220 6f79d537d655cc38dbb844e2e36fc634 342 Gene3D G3DSA:3.90.25.10 183 235 2.3E-43 T 22-04-2016 PGJ_RS07220 6f79d537d655cc38dbb844e2e36fc634 342 Gene3D G3DSA:3.90.25.10 271 339 2.3E-43 T 22-04-2016 PGJ_RS07220 6f79d537d655cc38dbb844e2e36fc634 342 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 340 5.3E-119 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 PGJ_RS07220 6f79d537d655cc38dbb844e2e36fc634 342 Gene3D G3DSA:3.40.50.720 2 182 9.9E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS07220 6f79d537d655cc38dbb844e2e36fc634 342 SUPERFAMILY SSF51735 1 338 1.46E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS07220 6f79d537d655cc38dbb844e2e36fc634 342 PRINTS PR01713 Nucleotide sugar epimerase signature 302 319 1.4E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 PGJ_RS07220 6f79d537d655cc38dbb844e2e36fc634 342 PRINTS PR01713 Nucleotide sugar epimerase signature 263 278 1.4E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 PGJ_RS07220 6f79d537d655cc38dbb844e2e36fc634 342 PRINTS PR01713 Nucleotide sugar epimerase signature 234 249 1.4E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 PGJ_RS07220 6f79d537d655cc38dbb844e2e36fc634 342 PANTHER PTHR10366:SF39 4 338 2.7E-125 T 22-04-2016 PGJ_RS05035 03e882402e3da54f5fa520918fe07c4c 270 PANTHER PTHR30625:SF8 44 270 9.0E-61 T 22-04-2016 PGJ_RS05035 03e882402e3da54f5fa520918fe07c4c 270 PANTHER PTHR30625 44 270 9.0E-61 T 22-04-2016 PGJ_RS05035 03e882402e3da54f5fa520918fe07c4c 270 Pfam PF01618 MotA/TolQ/ExbB proton channel family 132 251 3.9E-26 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PGJ_RS05805 080e46419c2819251bc5ec50519f4671 270 Pfam PF10728 Domain of unknown function (DUF2520) 136 260 3.7E-33 T 22-04-2016 IPR018931 Domain of unknown function DUF2520 PGJ_RS05805 080e46419c2819251bc5ec50519f4671 270 Gene3D G3DSA:1.10.1040.20 167 264 3.9E-34 T 22-04-2016 IPR018931 Domain of unknown function DUF2520 PGJ_RS05805 080e46419c2819251bc5ec50519f4671 270 PANTHER PTHR40459 2 257 1.5E-17 T 22-04-2016 PGJ_RS05805 080e46419c2819251bc5ec50519f4671 270 SUPERFAMILY SSF48179 170 268 2.99E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PGJ_RS05805 080e46419c2819251bc5ec50519f4671 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 13 90 1.1E-7 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PGJ_RS05805 080e46419c2819251bc5ec50519f4671 270 PANTHER PTHR40459:SF1 2 257 1.5E-17 T 22-04-2016 PGJ_RS05805 080e46419c2819251bc5ec50519f4671 270 Gene3D G3DSA:3.40.50.720 13 165 4.5E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS05805 080e46419c2819251bc5ec50519f4671 270 SUPERFAMILY SSF51735 13 168 5.53E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09685 4faa578cbe8f595e786d6aca342f6efd 248 Gene3D G3DSA:3.40.1280.10 2 240 1.7E-64 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PGJ_RS09685 4faa578cbe8f595e786d6aca342f6efd 248 PIRSF PIRSF015601 2 244 3.6E-57 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS09685 4faa578cbe8f595e786d6aca342f6efd 248 SUPERFAMILY SSF75217 72 239 2.35E-37 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PGJ_RS09685 4faa578cbe8f595e786d6aca342f6efd 248 SUPERFAMILY SSF88697 5 67 1.11E-13 T 22-04-2016 IPR015947 PUA-like domain PGJ_RS09685 4faa578cbe8f595e786d6aca342f6efd 248 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 12 238 8.1E-34 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS09685 4faa578cbe8f595e786d6aca342f6efd 248 Pfam PF04452 RNA methyltransferase 17 238 4.8E-59 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS09685 4faa578cbe8f595e786d6aca342f6efd 248 PANTHER PTHR30027:SF3 1 247 5.7E-54 T 22-04-2016 PGJ_RS09685 4faa578cbe8f595e786d6aca342f6efd 248 PANTHER PTHR30027 1 247 5.7E-54 T 22-04-2016 PGJ_RS00380 fb90d0db104781b2766b052468edd747 405 Gene3D G3DSA:3.30.830.10 223 402 2.4E-45 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PGJ_RS00380 fb90d0db104781b2766b052468edd747 405 Pfam PF05193 Peptidase M16 inactive domain 172 339 5.1E-28 T 22-04-2016 IPR007863 Peptidase M16, C-terminal PGJ_RS00380 fb90d0db104781b2766b052468edd747 405 SUPERFAMILY SSF63411 2 196 2.02E-50 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PGJ_RS00380 fb90d0db104781b2766b052468edd747 405 PANTHER PTHR11851 3 394 1.2E-91 T 22-04-2016 PGJ_RS00380 fb90d0db104781b2766b052468edd747 405 Pfam PF00675 Insulinase (Peptidase family M16) 21 159 2.4E-29 T 22-04-2016 IPR011765 Peptidase M16, N-terminal PGJ_RS00380 fb90d0db104781b2766b052468edd747 405 SUPERFAMILY SSF63411 224 402 2.17E-38 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PGJ_RS00380 fb90d0db104781b2766b052468edd747 405 Gene3D G3DSA:3.30.830.10 2 193 2.5E-48 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PGJ_RS06290 09b78da31c3f3ad16ee520a8ffb74c4f 99 SUPERFAMILY SSF54913 2 98 1.59E-11 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PGJ_RS01820 b7499ed6590b0c7b28145965494403a0 240 SUPERFAMILY SSF81324 29 228 1.28E-44 T 22-04-2016 PGJ_RS01820 b7499ed6590b0c7b28145965494403a0 240 PANTHER PTHR11537 29 213 4.6E-23 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS01820 b7499ed6590b0c7b28145965494403a0 240 PANTHER PTHR11537:SF14 29 213 4.6E-23 T 22-04-2016 PGJ_RS01820 b7499ed6590b0c7b28145965494403a0 240 Pfam PF00520 Ion transport protein 29 234 1.2E-22 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 PGJ_RS01820 b7499ed6590b0c7b28145965494403a0 240 PRINTS PR00169 Potassium channel signature 172 194 6.3E-12 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS01820 b7499ed6590b0c7b28145965494403a0 240 PRINTS PR00169 Potassium channel signature 55 75 6.3E-12 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS01820 b7499ed6590b0c7b28145965494403a0 240 PRINTS PR00169 Potassium channel signature 114 140 6.3E-12 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS01820 b7499ed6590b0c7b28145965494403a0 240 PRINTS PR00169 Potassium channel signature 201 227 6.3E-12 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS01820 b7499ed6590b0c7b28145965494403a0 240 Gene3D G3DSA:1.20.120.350 33 127 3.7E-16 T 22-04-2016 IPR027359 Voltage-dependent channel, four helix bundle domain PGJ_RS01820 b7499ed6590b0c7b28145965494403a0 240 Gene3D G3DSA:1.10.287.70 141 191 3.3E-14 T 22-04-2016 PGJ_RS01820 b7499ed6590b0c7b28145965494403a0 240 Gene3D G3DSA:1.20.5.110 193 234 3.6E-19 T 22-04-2016 PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 SUPERFAMILY SSF64153 4 251 8.37E-49 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 6 214 20.773 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 Gene3D G3DSA:3.40.50.10260 3 236 2.6E-55 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 Gene3D G3DSA:3.40.1190.20 237 501 5.0E-75 T 22-04-2016 IPR029056 Ribokinase-like PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 Pfam PF03853 YjeF-related protein N-terminus 27 192 3.4E-35 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 PANTHER PTHR12592:SF0 1 504 1.8E-106 T 22-04-2016 PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 504 20.796 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 236 498 1.7E-56 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 PIRSF PIRSF017184 2 504 7.4E-121 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 PANTHER PTHR12592 1 504 1.8E-106 T 22-04-2016 PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 SUPERFAMILY SSF53613 227 501 8.28E-65 T 22-04-2016 IPR029056 Ribokinase-like PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 11 213 4.6E-30 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PGJ_RS00290 ab9a246b91ee619d8b9a13ecaf0221c9 504 Pfam PF01256 Carbohydrate kinase 253 492 2.1E-47 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Gene3D G3DSA:2.30.150.10 553 620 1.4E-21 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Pfam PF00562 RNA polymerase Rpb2, domain 6 681 1193 3.4E-147 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Gene3D G3DSA:2.40.270.10 760 787 3.9E-74 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Gene3D G3DSA:2.40.270.10 1043 1171 3.9E-74 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 SUPERFAMILY SSF64484 9 222 0.0 T 22-04-2016 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 SUPERFAMILY SSF64484 1022 1267 0.0 T 22-04-2016 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 SUPERFAMILY SSF64484 304 906 0.0 T 22-04-2016 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Pfam PF04563 RNA polymerase beta subunit 25 461 2.3E-24 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1046 1058 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Pfam PF04560 RNA polymerase Rpb2, domain 7 1195 1268 3.7E-23 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Pfam PF10385 RNA polymerase beta subunit external 1 domain 552 620 9.3E-24 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Gene3D G3DSA:2.40.50.150 794 904 5.3E-52 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Gene3D G3DSA:2.40.50.150 1028 1042 5.3E-52 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 6 1267 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Gene3D G3DSA:3.90.1110.10 151 226 6.6E-57 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Gene3D G3DSA:3.90.1110.10 307 405 6.6E-57 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Pfam PF04565 RNA polymerase Rpb2, domain 3 474 542 2.6E-30 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Gene3D G3DSA:2.40.50.100 680 759 2.4E-20 T 22-04-2016 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 10 1269 11.746 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Pfam PF04561 RNA polymerase Rpb2, domain 2 309 415 5.2E-21 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Pfam PF04561 RNA polymerase Rpb2, domain 2 149 225 9.3E-8 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 PANTHER PTHR20856:SF20 710 897 0.0 T 22-04-2016 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 PANTHER PTHR20856:SF20 301 689 0.0 T 22-04-2016 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 PANTHER PTHR20856:SF20 1017 1268 0.0 T 22-04-2016 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 PANTHER PTHR20856:SF20 5 225 0.0 T 22-04-2016 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 PANTHER PTHR20856 710 897 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 PANTHER PTHR20856 301 689 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 PANTHER PTHR20856 1017 1268 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 PANTHER PTHR20856 5 225 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Gene3D G3DSA:3.90.1100.10 623 676 4.2E-133 T 22-04-2016 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Gene3D G3DSA:3.90.1100.10 18 149 4.2E-133 T 22-04-2016 PGJ_RS07020 4c43031ede6cc38a5bb93963f3ff0a9f 1269 Gene3D G3DSA:3.90.1100.10 406 552 4.2E-133 T 22-04-2016 PGJ_RS07360 d3ef58a1e35aafd6d3477de7a5f450a1 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.2E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07360 d3ef58a1e35aafd6d3477de7a5f450a1 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.2E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07360 d3ef58a1e35aafd6d3477de7a5f450a1 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.2E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07360 d3ef58a1e35aafd6d3477de7a5f450a1 85 SUPERFAMILY SSF110324 2 81 1.08E-33 T 22-04-2016 PGJ_RS07360 d3ef58a1e35aafd6d3477de7a5f450a1 85 PANTHER PTHR15893 1 81 2.9E-42 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07360 d3ef58a1e35aafd6d3477de7a5f450a1 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 26.855 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07360 d3ef58a1e35aafd6d3477de7a5f450a1 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07360 d3ef58a1e35aafd6d3477de7a5f450a1 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 4.0E-18 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07360 d3ef58a1e35aafd6d3477de7a5f450a1 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 5.1E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07360 d3ef58a1e35aafd6d3477de7a5f450a1 85 Gene3D G3DSA:2.40.50.100 20 81 7.8E-31 T 22-04-2016 PGJ_RS07360 d3ef58a1e35aafd6d3477de7a5f450a1 85 Pfam PF01016 Ribosomal L27 protein 2 81 6.3E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08355 0379c51386cab3dfae7a9d0672451fb7 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.3E-55 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PGJ_RS08355 0379c51386cab3dfae7a9d0672451fb7 144 Gene3D G3DSA:3.90.1170.10 23 138 2.3E-52 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08355 0379c51386cab3dfae7a9d0672451fb7 144 SUPERFAMILY SSF54686 1 139 1.31E-55 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08355 0379c51386cab3dfae7a9d0672451fb7 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.4E-34 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PGJ_RS08355 0379c51386cab3dfae7a9d0672451fb7 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.4E-34 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PGJ_RS08355 0379c51386cab3dfae7a9d0672451fb7 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.4E-34 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PGJ_RS08355 0379c51386cab3dfae7a9d0672451fb7 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.4E-34 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PGJ_RS08355 0379c51386cab3dfae7a9d0672451fb7 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08355 0379c51386cab3dfae7a9d0672451fb7 144 PANTHER PTHR12220 1 139 7.6E-70 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PGJ_RS08355 0379c51386cab3dfae7a9d0672451fb7 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.398 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PGJ_RS08355 0379c51386cab3dfae7a9d0672451fb7 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 9.5E-48 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 PANTHER PTHR22594:SF6 1 180 1.0E-224 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 PANTHER PTHR22594:SF6 199 468 1.0E-224 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 8 469 44.552 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 Gene3D G3DSA:3.30.930.10 108 466 7.8E-108 T 22-04-2016 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 SUPERFAMILY SSF50249 5 104 7.07E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 PRINTS PR01042 Aspartyl-tRNA synthetase signature 424 438 8.9E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 8.9E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 8.9E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 PRINTS PR01042 Aspartyl-tRNA synthetase signature 384 400 8.9E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 SUPERFAMILY SSF55681 98 467 1.33E-91 T 22-04-2016 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 PANTHER PTHR22594 1 180 1.0E-224 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 PANTHER PTHR22594 199 468 1.0E-224 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 17 469 3.6E-182 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 Pfam PF01336 OB-fold nucleic acid binding domain 24 100 4.0E-10 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 463 1.9E-78 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS03740 eaf773fd36a952d363f7fef83f7c3bbf 469 Gene3D G3DSA:2.40.50.140 5 105 2.5E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Gene3D G3DSA:1.10.150.20 435 502 8.0E-18 T 22-04-2016 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 SMART SM00278 479 498 26.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 SMART SM00278 543 562 15.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 PANTHER PTHR23389:SF9 10 529 2.6E-169 T 22-04-2016 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Gene3D G3DSA:1.10.287.610 9 68 1.2E-24 T 22-04-2016 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 117 146 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 396 3.6E-32 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 PANTHER PTHR23389 10 529 2.6E-169 T 22-04-2016 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 SMART SM00292 592 669 1.7E-9 T 22-04-2016 IPR001357 BRCT domain PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 SUPERFAMILY SSF56091 8 318 5.04E-109 T 22-04-2016 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 SMART SM00532 6 448 1.1E-223 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Gene3D G3DSA:2.40.50.140 321 390 1.2E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Pfam PF12826 Helix-hairpin-helix motif 510 572 6.1E-23 T 22-04-2016 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 SUPERFAMILY SSF47781 404 582 5.19E-49 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 SUPERFAMILY SSF52113 595 668 9.32E-15 T 22-04-2016 IPR001357 BRCT domain PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 667 1.6E-11 T 22-04-2016 IPR001357 BRCT domain PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 SUPERFAMILY SSF50249 318 396 2.06E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 663 5.2E-230 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 10 318 2.3E-115 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Gene3D G3DSA:1.10.150.20 503 583 2.2E-25 T 22-04-2016 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Gene3D G3DSA:3.40.50.10190 595 668 1.0E-19 T 22-04-2016 IPR001357 BRCT domain PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Hamap MF_01588 DNA ligase [ligA]. 5 667 46.414 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Pfam PF14520 Helix-hairpin-helix domain 453 498 2.8E-4 T 22-04-2016 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 PIRSF PIRSF001604 3 669 1.8E-245 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 433 2.5E-8 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 PGJ_RS02965 2f4ce0e20ab7708ee1fa7b72085920ff 669 Gene3D G3DSA:3.30.470.30 121 252 7.8E-45 T 22-04-2016 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 PANTHER PTHR22600:SF21 35 615 3.6E-225 T 22-04-2016 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 Pfam PF13287 Fn3 associated 560 607 8.2E-8 T 22-04-2016 IPR026876 Fn3 associated repeat PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 SUPERFAMILY SSF55545 35 168 1.44E-26 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 193 214 1.8E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 302 320 1.8E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 487 504 1.8E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 122 142 1.8E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 469 485 1.8E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 324 337 1.8E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 1.8E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 164 181 1.8E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 Gene3D G3DSA:3.30.379.10 5 167 5.5E-33 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 Gene3D G3DSA:3.20.20.80 168 539 1.5E-138 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 Gene3D G3DSA:3.90.182.10 680 741 3.8E-7 T 22-04-2016 IPR011658 PA14 domain PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 35 166 2.4E-24 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 SUPERFAMILY SSF51445 170 518 1.05E-126 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 170 505 1.7E-124 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 SMART SM00758 626 765 1.2E-27 T 22-04-2016 IPR011658 PA14 domain PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 Pfam PF07691 PA14 domain 627 765 9.7E-22 T 22-04-2016 IPR011658 PA14 domain PGJ_RS00185 87688f853f3220b8fe4600f9b54c2599 777 PANTHER PTHR22600 35 615 3.6E-225 T 22-04-2016 PGJ_RS06865 888d91d7f948d9076291b1df3fc09538 366 PANTHER PTHR30469 50 366 1.0E-32 T 22-04-2016 PGJ_RS06865 888d91d7f948d9076291b1df3fc09538 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 53 363 2.4E-41 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PGJ_RS06865 888d91d7f948d9076291b1df3fc09538 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 89 283 9.4E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PGJ_RS06865 888d91d7f948d9076291b1df3fc09538 366 SUPERFAMILY SSF111369 90 289 3.01E-12 T 22-04-2016 PGJ_RS06865 888d91d7f948d9076291b1df3fc09538 366 Gene3D G3DSA:2.40.50.100 179 210 8.4E-7 T 22-04-2016 PGJ_RS06865 888d91d7f948d9076291b1df3fc09538 366 Gene3D G3DSA:2.40.50.100 91 111 8.4E-7 T 22-04-2016 PGJ_RS03565 ae44c359084b0722ec450f925871bc93 261 PIRSF PIRSF000090 1 261 1.0E-92 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PGJ_RS03565 ae44c359084b0722ec450f925871bc93 261 PANTHER PTHR21294 1 261 5.2E-112 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PGJ_RS03565 ae44c359084b0722ec450f925871bc93 261 PANTHER PTHR21294:SF0 1 261 5.2E-112 T 22-04-2016 PGJ_RS03565 ae44c359084b0722ec450f925871bc93 261 Gene3D G3DSA:3.40.50.620 1 258 1.5E-93 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS03565 ae44c359084b0722ec450f925871bc93 261 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 156 176 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 PGJ_RS03565 ae44c359084b0722ec450f925871bc93 261 Pfam PF01012 Electron transfer flavoprotein domain 23 206 4.8E-50 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PGJ_RS03565 ae44c359084b0722ec450f925871bc93 261 SUPERFAMILY SSF52402 1 257 1.57E-79 T 22-04-2016 PGJ_RS03565 ae44c359084b0722ec450f925871bc93 261 SMART SM00893 22 212 2.4E-66 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 PANTHER PTHR33209 78 564 1.4E-167 T 22-04-2016 PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 20 557 4.2E-146 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 SUPERFAMILY SSF52096 296 424 8.7E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 Gene3D G3DSA:3.90.226.10 454 530 6.2E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 Gene3D G3DSA:3.90.226.10 296 416 6.2E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 Gene3D G3DSA:3.90.226.10 24 162 5.9E-55 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 Gene3D G3DSA:3.90.226.10 205 294 5.9E-55 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 SUPERFAMILY SSF52096 453 514 8.7E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 SUPERFAMILY SSF52096 197 266 1.19E-24 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 SUPERFAMILY SSF52096 24 166 1.19E-24 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 Pfam PF01343 Peptidase family S49 126 277 2.6E-34 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 Pfam PF01343 Peptidase family S49 376 527 1.2E-52 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 PANTHER PTHR33209:SF1 78 564 1.4E-167 T 22-04-2016 PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 315 525 1.7E-59 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 PGJ_RS05900 733203a3bf3379192a41ab819621078f 595 PIRSF PIRSF001217 1 592 1.5E-198 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 PGJ_RS07155 fb7f7626200bffd81cbfb01a2391b274 275 SUPERFAMILY SSF53850 68 274 1.09E-25 T 22-04-2016 PGJ_RS07155 fb7f7626200bffd81cbfb01a2391b274 275 PANTHER PTHR21666 96 274 3.9E-21 T 22-04-2016 PGJ_RS07155 fb7f7626200bffd81cbfb01a2391b274 275 Gene3D G3DSA:3.40.190.10 237 274 1.5E-9 T 22-04-2016 PGJ_RS07155 fb7f7626200bffd81cbfb01a2391b274 275 Gene3D G3DSA:3.40.190.10 52 138 1.5E-9 T 22-04-2016 PGJ_RS07155 fb7f7626200bffd81cbfb01a2391b274 275 PANTHER PTHR21666:SF181 96 274 3.9E-21 T 22-04-2016 PGJ_RS07155 fb7f7626200bffd81cbfb01a2391b274 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 68 274 1.3E-18 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PGJ_RS07155 fb7f7626200bffd81cbfb01a2391b274 275 SMART SM00062 52 275 0.0027 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PGJ_RS04355 a7dee47dcae9f96cbd883f0f48f04d0d 221 Pfam PF02666 Phosphatidylserine decarboxylase 48 216 1.1E-25 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PGJ_RS04355 a7dee47dcae9f96cbd883f0f48f04d0d 221 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 2 220 30.959 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PGJ_RS04355 a7dee47dcae9f96cbd883f0f48f04d0d 221 PANTHER PTHR35809 1 221 9.4E-61 T 22-04-2016 PGJ_RS04355 a7dee47dcae9f96cbd883f0f48f04d0d 221 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 34 219 4.1E-48 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PGJ_RS05475 a151a3e5f8cc23a1d6b47347a3fe0d63 417 Gene3D G3DSA:2.40.50.100 232 263 1.4E-9 T 22-04-2016 PGJ_RS05475 a151a3e5f8cc23a1d6b47347a3fe0d63 417 Gene3D G3DSA:2.40.50.100 74 107 1.4E-9 T 22-04-2016 PGJ_RS05475 a151a3e5f8cc23a1d6b47347a3fe0d63 417 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 208 404 2.0E-28 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PGJ_RS05475 a151a3e5f8cc23a1d6b47347a3fe0d63 417 PANTHER PTHR32347 1 417 4.0E-51 T 22-04-2016 PGJ_RS05475 a151a3e5f8cc23a1d6b47347a3fe0d63 417 Pfam PF13437 HlyD family secretion protein 235 312 2.7E-8 T 22-04-2016 PGJ_RS05475 a151a3e5f8cc23a1d6b47347a3fe0d63 417 PANTHER PTHR32347:SF14 1 417 4.0E-51 T 22-04-2016 PGJ_RS05475 a151a3e5f8cc23a1d6b47347a3fe0d63 417 SUPERFAMILY SSF111369 63 126 6.93E-8 T 22-04-2016 PGJ_RS05475 a151a3e5f8cc23a1d6b47347a3fe0d63 417 SUPERFAMILY SSF111369 211 305 6.93E-8 T 22-04-2016 PGJ_RS05475 a151a3e5f8cc23a1d6b47347a3fe0d63 417 SUPERFAMILY SSF111369 159 178 6.93E-8 T 22-04-2016 PGJ_RS09755 3a0a9a2a93c4bbc7458b4328165c4fd1 110 PANTHER PTHR23514:SF10 15 106 5.8E-15 T 22-04-2016 PGJ_RS09755 3a0a9a2a93c4bbc7458b4328165c4fd1 110 PANTHER PTHR23514 15 106 5.8E-15 T 22-04-2016 PGJ_RS09755 3a0a9a2a93c4bbc7458b4328165c4fd1 110 Gene3D G3DSA:1.20.1250.20 13 98 1.1E-6 T 22-04-2016 PGJ_RS09755 3a0a9a2a93c4bbc7458b4328165c4fd1 110 SUPERFAMILY SSF103473 13 101 3.27E-10 T 22-04-2016 IPR020846 Major facilitator superfamily domain PGJ_RS03680 b541840f79ab44cfe20022014ef01efd 486 PANTHER PTHR11819:SF94 3 426 2.6E-95 T 22-04-2016 IPR031155 Urea active transporter GO:0015204|GO:0016021|GO:0071918 PGJ_RS03680 b541840f79ab44cfe20022014ef01efd 486 Pfam PF00474 Sodium:solute symporter family 33 426 2.7E-27 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PGJ_RS03680 b541840f79ab44cfe20022014ef01efd 486 PANTHER PTHR11819 3 426 2.6E-95 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PGJ_RS06475 7db26d5edd411b178957cea1dfb7f253 736 Pfam PF08126 Propeptide_C25 25 222 2.1E-89 T 22-04-2016 IPR012600 Gingipain propeptide GO:0004197 PGJ_RS06475 7db26d5edd411b178957cea1dfb7f253 736 Pfam PF01364 Peptidase family C25 241 573 3.0E-63 T 22-04-2016 IPR001769 Gingipain GO:0006508|GO:0008234 PGJ_RS06475 7db26d5edd411b178957cea1dfb7f253 736 SUPERFAMILY SSF52129 230 577 1.46E-117 T 22-04-2016 IPR029030 Caspase-like domain PGJ_RS06475 7db26d5edd411b178957cea1dfb7f253 736 Gene3D G3DSA:3.40.50.1460 348 576 1.0E-70 T 22-04-2016 IPR029030 Caspase-like domain PGJ_RS06475 7db26d5edd411b178957cea1dfb7f253 736 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 685 736 2.8E-7 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS06475 7db26d5edd411b178957cea1dfb7f253 736 Pfam PF03785 Peptidase family C25, C terminal ig-like domain 580 659 2.3E-31 T 22-04-2016 IPR005536 Peptidase C25, Ig-like domain GO:0006508|GO:0008233 PGJ_RS06475 7db26d5edd411b178957cea1dfb7f253 736 Gene3D G3DSA:2.60.40.10 579 664 1.0E-49 T 22-04-2016 IPR013783 Immunoglobulin-like fold PGJ_RS06475 7db26d5edd411b178957cea1dfb7f253 736 SUPERFAMILY SSF81296 580 661 9.94E-40 T 22-04-2016 IPR014756 Immunoglobulin E-set PGJ_RS06475 7db26d5edd411b178957cea1dfb7f253 736 Gene3D G3DSA:3.40.50.10390 231 346 5.2E-42 T 22-04-2016 IPR029031 Gingipain, N-terminal PGJ_RS02345 0d5bd22bc87a47d5f58a53f0d971dd11 295 PANTHER PTHR34138:SF1 1 289 1.9E-33 T 22-04-2016 PGJ_RS02345 0d5bd22bc87a47d5f58a53f0d971dd11 295 Pfam PF04085 rod shape-determining protein MreC 120 272 3.2E-33 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 PGJ_RS02345 0d5bd22bc87a47d5f58a53f0d971dd11 295 PANTHER PTHR34138 1 289 1.9E-33 T 22-04-2016 PGJ_RS09875 8aae2bb4d5693b0ecf56bd28f940e5fb 293 Gene3D G3DSA:2.60.40.10 134 219 5.8E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 Gene3D G3DSA:2.60.40.1120 29 106 5.8E-16 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 SUPERFAMILY SSF49464 27 114 2.2E-18 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 PANTHER PTHR30069:SF2 387 648 1.1E-60 T 22-04-2016 PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 PANTHER PTHR30069:SF2 6 361 1.1E-60 T 22-04-2016 PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 Gene3D G3DSA:2.170.130.10 107 234 3.1E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 PANTHER PTHR30069 387 648 1.1E-60 T 22-04-2016 PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 PANTHER PTHR30069 6 361 1.1E-60 T 22-04-2016 PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 SUPERFAMILY SSF56935 112 833 5.49E-81 T 22-04-2016 PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 Pfam PF13715 CarboxypepD_reg-like domain 29 116 9.5E-24 T 22-04-2016 PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 Gene3D G3DSA:2.40.170.20 427 833 9.3E-63 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 Gene3D G3DSA:2.40.170.20 235 394 9.3E-63 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 Pfam PF00593 TonB dependent receptor 520 831 9.1E-23 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS08695 4ff31e2ac1334f8c913bf9516441d822 833 Pfam PF07715 TonB-dependent Receptor Plug Domain 126 231 7.5E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS02080 cf6e34e02101f4d8bde558a61f7e99e8 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 7 337 3.7E-144 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PGJ_RS02080 cf6e34e02101f4d8bde558a61f7e99e8 354 Gene3D G3DSA:3.40.50.720 5 192 1.6E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02080 cf6e34e02101f4d8bde558a61f7e99e8 354 SUPERFAMILY SSF51735 5 349 5.63E-95 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02080 cf6e34e02101f4d8bde558a61f7e99e8 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 324 7.4E-101 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02080 cf6e34e02101f4d8bde558a61f7e99e8 354 Gene3D G3DSA:3.90.25.10 193 348 2.3E-55 T 22-04-2016 PGJ_RS02080 cf6e34e02101f4d8bde558a61f7e99e8 354 PANTHER PTHR10366 6 351 7.9E-165 T 22-04-2016 PGJ_RS02080 cf6e34e02101f4d8bde558a61f7e99e8 354 PANTHER PTHR10366:SF41 6 351 7.9E-165 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PGJ_RS06770 ec583119d486b932387847f512c75fed 659 Pfam PF03169 OPT oligopeptide transporter protein 36 614 4.2E-107 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 PGJ_RS06770 ec583119d486b932387847f512c75fed 659 PANTHER PTHR31645 1 647 7.7E-116 T 22-04-2016 PGJ_RS06770 ec583119d486b932387847f512c75fed 659 PANTHER PTHR31645:SF0 1 647 7.7E-116 T 22-04-2016 PGJ_RS06770 ec583119d486b932387847f512c75fed 659 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 36 614 4.5E-75 T 22-04-2016 IPR004814 Oligopeptide transporter OPT PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PANTHER PTHR22912:SF48 1 308 7.1E-143 T 22-04-2016 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 SUPERFAMILY SSF51905 1 308 9.46E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 Gene3D G3DSA:3.50.50.60 120 242 2.9E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.4E-38 T 22-04-2016 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 2.4E-38 T 22-04-2016 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 2.4E-38 T 22-04-2016 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 2.4E-38 T 22-04-2016 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.4E-38 T 22-04-2016 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 Gene3D G3DSA:3.50.50.60 1 119 1.4E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 Gene3D G3DSA:3.50.50.60 243 309 1.4E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 3.2E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 3.2E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 3.2E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 3.2E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 236 257 3.2E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 3.2E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 3.2E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 3.2E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 195 211 3.2E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 297 1.3E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 PANTHER PTHR22912 1 308 7.1E-143 T 22-04-2016 PGJ_RS03805 80040d8c99645896e61e692e8320aa2f 313 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 308 2.7E-110 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 PGJ_RS08130 d26f6b36dd7317a7a47d7b902d703235 339 SUPERFAMILY SSF52151 6 204 1.41E-39 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PGJ_RS08130 d26f6b36dd7317a7a47d7b902d703235 339 Pfam PF01734 Patatin-like phospholipase 8 198 6.0E-31 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PGJ_RS08130 d26f6b36dd7317a7a47d7b902d703235 339 Gene3D G3DSA:3.40.1090.10 8 196 7.8E-14 T 22-04-2016 PGJ_RS08130 d26f6b36dd7317a7a47d7b902d703235 339 PANTHER PTHR11584 1 219 3.1E-38 T 22-04-2016 PGJ_RS08130 d26f6b36dd7317a7a47d7b902d703235 339 PANTHER PTHR11584:SF382 1 219 3.1E-38 T 22-04-2016 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 597 24.114 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 Pfam PF05746 DALR anticodon binding domain 478 597 6.8E-30 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 Pfam PF00750 tRNA synthetases class I (R) 110 462 2.2E-45 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 Gene3D G3DSA:3.40.50.620 118 470 3.6E-94 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 Gene3D G3DSA:3.30.1360.70 9 100 4.1E-13 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 SUPERFAMILY SSF55190 8 100 2.62E-13 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 SMART SM01016 5 88 2.7E-11 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 PRINTS PR01038 Arginyl-tRNA synthetase signature 117 132 1.1E-17 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 PRINTS PR01038 Arginyl-tRNA synthetase signature 132 148 1.1E-17 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 PRINTS PR01038 Arginyl-tRNA synthetase signature 321 342 1.1E-17 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 PRINTS PR01038 Arginyl-tRNA synthetase signature 156 169 1.1E-17 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 6 88 1.4E-7 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 4 597 7.3E-129 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 SUPERFAMILY SSF47323 473 597 9.81E-31 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 SUPERFAMILY SSF52374 115 472 6.48E-77 T 22-04-2016 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 125 136 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 PANTHER PTHR11956 1 210 4.8E-177 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 PANTHER PTHR11956 228 597 4.8E-177 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 PANTHER PTHR11956:SF6 1 210 4.8E-177 T 22-04-2016 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 PANTHER PTHR11956:SF6 228 597 4.8E-177 T 22-04-2016 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 Gene3D G3DSA:1.10.730.10 472 597 4.1E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS01190 6e99f4d6c3be935a04b7d54d0448576a 597 SMART SM00836 478 597 2.2E-43 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PGJ_RS09240 4c52cff6f1a264770f7f27fa0220c955 337 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 1 330 60.247 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS09240 4c52cff6f1a264770f7f27fa0220c955 337 Pfam PF04055 Radical SAM superfamily 99 256 4.9E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS09240 4c52cff6f1a264770f7f27fa0220c955 337 PANTHER PTHR30544:SF5 1 324 2.5E-129 T 22-04-2016 PGJ_RS09240 4c52cff6f1a264770f7f27fa0220c955 337 Gene3D G3DSA:3.20.20.70 95 301 3.2E-12 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS09240 4c52cff6f1a264770f7f27fa0220c955 337 SUPERFAMILY SSF102114 91 302 1.1E-14 T 22-04-2016 PGJ_RS09240 4c52cff6f1a264770f7f27fa0220c955 337 PANTHER PTHR30544 1 324 2.5E-129 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS09240 4c52cff6f1a264770f7f27fa0220c955 337 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 331 3.4E-99 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS09240 4c52cff6f1a264770f7f27fa0220c955 337 PIRSF PIRSF006004 1 337 1.6E-111 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS09240 4c52cff6f1a264770f7f27fa0220c955 337 Pfam PF13394 4Fe-4S single cluster domain 103 185 2.6E-5 T 22-04-2016 PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 SMART SM00382 91 243 9.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 SUPERFAMILY SSF52540 69 290 3.73E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 SUPERFAMILY SSF54211 254 268 2.62E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 SUPERFAMILY SSF54211 302 457 2.62E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 PANTHER PTHR32472 1 456 1.3E-189 T 22-04-2016 PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 Gene3D G3DSA:3.30.230.10 284 456 1.9E-35 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 Gene3D G3DSA:3.40.50.300 62 275 3.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 Pfam PF13541 Subunit ChlI of Mg-chelatase 343 429 2.3E-9 T 22-04-2016 PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 PRINTS PR01874 DNA repair protein radA signature 321 344 1.7E-86 T 22-04-2016 PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 PRINTS PR01874 DNA repair protein radA signature 83 111 1.7E-86 T 22-04-2016 PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 PRINTS PR01874 DNA repair protein radA signature 212 240 1.7E-86 T 22-04-2016 PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 PRINTS PR01874 DNA repair protein radA signature 247 273 1.7E-86 T 22-04-2016 PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 PRINTS PR01874 DNA repair protein radA signature 173 197 1.7E-86 T 22-04-2016 PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 PRINTS PR01874 DNA repair protein radA signature 10 34 1.7E-86 T 22-04-2016 PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 PRINTS PR01874 DNA repair protein radA signature 123 140 1.7E-86 T 22-04-2016 PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 9.4E-173 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 Pfam PF13481 AAA domain 83 221 5.8E-14 T 22-04-2016 PGJ_RS01025 4f705237a695c39baaa6c49413647a35 461 PANTHER PTHR32472:SF10 1 456 1.3E-189 T 22-04-2016 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 Pfam PF00679 Elongation factor G C-terminus 621 706 1.9E-26 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 Gene3D G3DSA:3.30.70.240 618 708 1.4E-27 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 SMART SM00838 620 707 2.7E-34 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 PANTHER PTHR23115:SF91 251 523 3.5E-217 T 22-04-2016 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 PANTHER PTHR23115:SF91 549 711 3.5E-217 T 22-04-2016 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 PANTHER PTHR23115:SF91 11 176 3.5E-217 T 22-04-2016 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 SUPERFAMILY SSF54980 623 712 1.12E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 Pfam PF14492 Elongation Factor G, domain II 395 466 1.9E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 SUPERFAMILY SSF54980 394 470 1.83E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 PRINTS PR00315 GTP-binding elongation factor signature 11 24 6.7E-5 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 PRINTS PR00315 GTP-binding elongation factor signature 77 87 6.7E-5 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 PRINTS PR00315 GTP-binding elongation factor signature 129 138 6.7E-5 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 PRINTS PR00315 GTP-binding elongation factor signature 93 104 6.7E-5 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 Pfam PF03764 Elongation factor G, domain IV 470 617 2.8E-27 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 Gene3D G3DSA:3.30.70.870 397 470 4.5E-21 T 22-04-2016 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 Pfam PF03144 Elongation factor Tu domain 2 315 381 1.3E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 SMART SM00889 471 618 2.6E-49 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 SUPERFAMILY SSF52540 5 277 8.46E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 Gene3D G3DSA:2.40.30.10 296 396 2.9E-23 T 22-04-2016 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 178 1.4E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 Gene3D G3DSA:3.40.50.300 3 277 3.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 Gene3D G3DSA:3.30.230.10 475 617 6.2E-40 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 PANTHER PTHR23115 251 523 3.5E-217 T 22-04-2016 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 PANTHER PTHR23115 549 711 3.5E-217 T 22-04-2016 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 PANTHER PTHR23115 11 176 3.5E-217 T 22-04-2016 PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 SUPERFAMILY SSF50447 280 395 2.56E-19 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 SUPERFAMILY SSF54211 541 619 1.97E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 SUPERFAMILY SSF54211 470 511 1.97E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS04490 c21257d9123cfa87638776ecfa94e7e6 719 Pfam PF00009 Elongation factor Tu GTP binding domain 8 276 1.0E-33 T 22-04-2016 PGJ_RS02270 eac57812e26a850fd41e97e8bac57ab9 867 Gene3D G3DSA:2.170.130.10 105 233 1.3E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS02270 eac57812e26a850fd41e97e8bac57ab9 867 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 850 867 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site PGJ_RS02270 eac57812e26a850fd41e97e8bac57ab9 867 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 231 7.9E-12 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS02270 eac57812e26a850fd41e97e8bac57ab9 867 Gene3D G3DSA:2.60.40.1120 28 104 3.1E-8 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS02270 eac57812e26a850fd41e97e8bac57ab9 867 PANTHER PTHR30069 4 381 9.2E-31 T 22-04-2016 PGJ_RS02270 eac57812e26a850fd41e97e8bac57ab9 867 SUPERFAMILY SSF56935 102 867 3.55E-74 T 22-04-2016 PGJ_RS02270 eac57812e26a850fd41e97e8bac57ab9 867 Gene3D G3DSA:2.40.170.20 234 413 1.2E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS02270 eac57812e26a850fd41e97e8bac57ab9 867 Gene3D G3DSA:2.40.170.20 446 867 1.2E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS02270 eac57812e26a850fd41e97e8bac57ab9 867 Pfam PF13715 CarboxypepD_reg-like domain 28 114 4.6E-13 T 22-04-2016 PGJ_RS02270 eac57812e26a850fd41e97e8bac57ab9 867 SUPERFAMILY SSF49464 26 112 1.44E-11 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 247 364 1.2E-7 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 PANTHER PTHR11669:SF0 11 497 2.8E-152 T 22-04-2016 PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 Gene3D G3DSA:1.20.272.10 246 362 5.5E-10 T 22-04-2016 PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 Pfam PF13177 DNA polymerase III, delta subunit 22 181 2.1E-45 T 22-04-2016 PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 127 145 1.7E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 43 61 1.7E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 PANTHER PTHR11669 11 497 2.8E-152 T 22-04-2016 PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 SMART SM00382 39 182 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 Gene3D G3DSA:1.10.8.60 170 242 1.0E-28 T 22-04-2016 PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 Gene3D G3DSA:3.40.50.300 17 169 4.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 SUPERFAMILY SSF48019 246 369 2.89E-23 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 5 360 2.3E-129 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 PGJ_RS02250 b88c8ae6b15d7b625df7e603a8d5c703 602 SUPERFAMILY SSF52540 34 224 5.34E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07390 2c1db92a753329ac6cb7513e120ea495 337 PANTHER PTHR30040 1 337 7.3E-94 T 22-04-2016 PGJ_RS07390 2c1db92a753329ac6cb7513e120ea495 337 Pfam PF02424 ApbE family 38 312 2.9E-72 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 PGJ_RS07390 2c1db92a753329ac6cb7513e120ea495 337 PANTHER PTHR30040:SF3 1 337 7.3E-94 T 22-04-2016 PGJ_RS07390 2c1db92a753329ac6cb7513e120ea495 337 SUPERFAMILY SSF143631 30 333 6.02E-79 T 22-04-2016 IPR003374 ApbE-like domain PGJ_RS07390 2c1db92a753329ac6cb7513e120ea495 337 PIRSF PIRSF006268 6 334 4.1E-72 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 SUPERFAMILY SSF55031 202 307 8.37E-6 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 3.0E-67 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 250 269 3.0E-67 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 205 222 3.0E-67 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 79 98 3.0E-67 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 158 176 3.0E-67 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 100 118 3.0E-67 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 3.0E-67 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 134 151 3.0E-67 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 6 482 4.2E-177 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 Pfam PF07687 Peptidase dimerisation domain 208 292 1.2E-7 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PANTHER PTHR11014 1 184 6.7E-161 T 22-04-2016 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PANTHER PTHR11014 203 278 6.7E-161 T 22-04-2016 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PANTHER PTHR11014 329 486 6.7E-161 T 22-04-2016 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 Gene3D G3DSA:3.40.630.10 2 180 1.5E-104 T 22-04-2016 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 Gene3D G3DSA:3.40.630.10 397 483 1.5E-104 T 22-04-2016 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 Pfam PF01546 Peptidase family M20/M25/M40 71 469 6.6E-19 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 SUPERFAMILY SSF53187 397 482 4.53E-61 T 22-04-2016 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 SUPERFAMILY SSF53187 10 181 4.53E-61 T 22-04-2016 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PIRSF PIRSF016599 1 485 3.7E-205 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PANTHER PTHR11014:SF54 1 184 6.7E-161 T 22-04-2016 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PANTHER PTHR11014:SF54 203 278 6.7E-161 T 22-04-2016 PGJ_RS06310 3c95064c52ce7bb50d0c88f7b73298bc 486 PANTHER PTHR11014:SF54 329 486 6.7E-161 T 22-04-2016 PGJ_RS01760 ef8cfdee410ed6b249b0c8a295f2e770 126 SUPERFAMILY SSF46689 3 106 1.25E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS01760 ef8cfdee410ed6b249b0c8a295f2e770 126 Gene3D G3DSA:1.10.10.60 16 92 6.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 SUPERFAMILY SSF47323 584 820 9.72E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 808 873 4.0E-14 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 SUPERFAMILY SSF52374 3 192 4.55E-126 T 22-04-2016 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 SUPERFAMILY SSF52374 341 583 4.55E-126 T 22-04-2016 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 570 1.7E-180 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 873 14.639 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 Gene3D G3DSA:3.90.740.10 194 337 8.8E-45 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 Gene3D G3DSA:1.10.287.380 802 873 1.0E-7 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 Pfam PF08264 Anticodon-binding domain of tRNA 614 755 1.5E-30 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 Gene3D G3DSA:3.40.50.620 341 560 5.7E-129 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 Gene3D G3DSA:3.40.50.620 6 193 5.7E-129 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 SUPERFAMILY SSF46589 808 872 4.92E-13 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 PANTHER PTHR11946:SF5 1 786 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 PANTHER PTHR11946:SF5 804 866 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 SUPERFAMILY SSF50677 190 341 1.57E-56 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 Gene3D G3DSA:1.10.730.10 561 720 2.2E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 2.8E-28 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 2.8E-28 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 PRINTS PR00986 Valyl-tRNA synthetase signature 346 359 2.8E-28 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 PRINTS PR00986 Valyl-tRNA synthetase signature 485 503 2.8E-28 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 PRINTS PR00986 Valyl-tRNA synthetase signature 452 473 2.8E-28 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 PANTHER PTHR11946 1 786 0.0 T 22-04-2016 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 PANTHER PTHR11946 804 866 0.0 T 22-04-2016 PGJ_RS03790 86ad00dbec23453a5dabb6c0985b174c 876 TIGRFAM TIGR00422 valS: valine--tRNA ligase 4 854 3.9E-286 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PGJ_RS06645 f08128e3c9b8c1e11c11c031b5f732b5 515 PANTHER PTHR30032:SF2 38 228 2.1E-48 T 22-04-2016 PGJ_RS06645 f08128e3c9b8c1e11c11c031b5f732b5 515 PANTHER PTHR30032:SF2 247 321 2.1E-48 T 22-04-2016 PGJ_RS06645 f08128e3c9b8c1e11c11c031b5f732b5 515 Gene3D G3DSA:3.20.20.80 196 321 4.5E-6 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS06645 f08128e3c9b8c1e11c11c031b5f732b5 515 PANTHER PTHR30032 38 228 2.1E-48 T 22-04-2016 PGJ_RS06645 f08128e3c9b8c1e11c11c031b5f732b5 515 PANTHER PTHR30032 247 321 2.1E-48 T 22-04-2016 PGJ_RS06645 f08128e3c9b8c1e11c11c031b5f732b5 515 SUPERFAMILY SSF51445 83 335 6.71E-18 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS06645 f08128e3c9b8c1e11c11c031b5f732b5 515 Pfam PF02638 Glycosyl hydrolase-like 10 56 323 1.1E-45 T 22-04-2016 IPR003790 Glycosyl hydrolase-like 10 PGJ_RS09505 5f5702ec692ebb9cdcc66296ef213552 323 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 140 222 8.3E-14 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 PGJ_RS09505 5f5702ec692ebb9cdcc66296ef213552 323 Gene3D G3DSA:3.40.50.720 3 199 9.5E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09505 5f5702ec692ebb9cdcc66296ef213552 323 PANTHER PTHR22604 3 200 9.3E-22 T 22-04-2016 PGJ_RS09505 5f5702ec692ebb9cdcc66296ef213552 323 SUPERFAMILY SSF51735 3 174 1.38E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09505 5f5702ec692ebb9cdcc66296ef213552 323 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 124 3.4E-18 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 PGJ_RS00510 59ac9b99c60af019cb4931a04d0aaada 351 PANTHER PTHR12526 48 351 4.4E-45 T 22-04-2016 PGJ_RS00510 59ac9b99c60af019cb4931a04d0aaada 351 Gene3D G3DSA:3.40.50.2000 177 315 6.3E-22 T 22-04-2016 PGJ_RS00510 59ac9b99c60af019cb4931a04d0aaada 351 SUPERFAMILY SSF53756 22 351 5.1E-59 T 22-04-2016 PGJ_RS00510 59ac9b99c60af019cb4931a04d0aaada 351 Pfam PF00534 Glycosyl transferases group 1 178 319 3.6E-28 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 PGJ_RS00510 59ac9b99c60af019cb4931a04d0aaada 351 Pfam PF13439 Glycosyltransferase Family 4 57 159 2.6E-7 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 PRINTS PR00471 Acetate kinase family signature 323 339 2.3E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 PRINTS PR00471 Acetate kinase family signature 3 14 2.3E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 PRINTS PR00471 Acetate kinase family signature 174 187 2.3E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 PRINTS PR00471 Acetate kinase family signature 204 225 2.3E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 PRINTS PR00471 Acetate kinase family signature 301 314 2.3E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 PRINTS PR00471 Acetate kinase family signature 378 390 2.3E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 Gene3D G3DSA:3.30.420.40 84 205 1.7E-8 T 22-04-2016 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 TIGRFAM TIGR00016 ackA: acetate kinase 1 396 4.6E-154 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 Gene3D G3DSA:3.30.420.40 206 396 3.2E-76 T 22-04-2016 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 185.104 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 SUPERFAMILY SSF53067 1 196 5.96E-67 T 22-04-2016 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 SUPERFAMILY SSF53067 157 397 9.61E-90 T 22-04-2016 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 PANTHER PTHR21060 1 398 2.2E-204 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 PANTHER PTHR21060:SF11 1 398 2.2E-204 T 22-04-2016 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 PIRSF PIRSF000722 1 398 2.5E-148 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS03585 b46aa97742af30e9934e606d2b228e3e 398 Pfam PF00871 Acetokinase family 2 390 3.5E-155 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 SUPERFAMILY SSF52540 329 611 2.61E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 Pfam PF07497 Rho termination factor, RNA-binding domain 290 363 2.6E-30 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 SUPERFAMILY SSF68912 5 46 2.24E-7 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 SUPERFAMILY SSF50249 290 363 1.54E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 Pfam PF07498 Rho termination factor, N-terminal domain 8 46 8.3E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 SMART SM00357 290 356 1.2E-13 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 SMART SM00384 102 114 0.15 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 SMART SM00384 67 79 4.3 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 399 603 1.8E-23 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 PANTHER PTHR15184 340 384 4.7E-181 T 22-04-2016 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 PANTHER PTHR15184 400 658 4.7E-181 T 22-04-2016 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 Pfam PF02178 AT hook motif 102 113 0.014 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 Pfam PF02178 AT hook motif 69 78 10.0 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 SMART SM00382 410 595 8.9E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 Hamap MF_01884 Transcription termination factor Rho [rho]. 291 658 200.569 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 Gene3D G3DSA:3.40.50.300 369 656 3.6E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 TIGRFAM TIGR00767 rho: transcription termination factor Rho 6 657 9.8E-191 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 SMART SM00959 8 50 4.0E-10 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 Gene3D G3DSA:2.40.50.140 284 364 2.4E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 Gene3D G3DSA:2.40.50.140 5 48 2.4E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 PANTHER PTHR15184:SF34 340 384 4.7E-181 T 22-04-2016 PGJ_RS07280 1955a91bb49023e793de54f09d441afa 658 PANTHER PTHR15184:SF34 400 658 4.7E-181 T 22-04-2016 PGJ_RS05865 aa54f62eceaa1d05b36689cae4a4ccfc 344 SUPERFAMILY SSF81345 3 335 2.75E-68 T 22-04-2016 IPR029022 ABC transporter, BtuC-like PGJ_RS05865 aa54f62eceaa1d05b36689cae4a4ccfc 344 PANTHER PTHR30472:SF32 3 341 6.7E-100 T 22-04-2016 PGJ_RS05865 aa54f62eceaa1d05b36689cae4a4ccfc 344 Pfam PF01032 FecCD transport family 14 335 1.3E-78 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PGJ_RS05865 aa54f62eceaa1d05b36689cae4a4ccfc 344 Gene3D G3DSA:1.10.3470.10 2 339 2.5E-92 T 22-04-2016 IPR029022 ABC transporter, BtuC-like PGJ_RS05865 aa54f62eceaa1d05b36689cae4a4ccfc 344 PANTHER PTHR30472 3 341 6.7E-100 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PGJ_RS02525 2cc55c269fa42d5696fab969d05a2722 172 PANTHER PTHR10434 1 149 1.5E-41 T 22-04-2016 PGJ_RS02525 2cc55c269fa42d5696fab969d05a2722 172 PANTHER PTHR10434:SF9 1 149 1.5E-41 T 22-04-2016 PGJ_RS02525 2cc55c269fa42d5696fab969d05a2722 172 SUPERFAMILY SSF69593 15 130 7.19E-16 T 22-04-2016 PGJ_RS02525 2cc55c269fa42d5696fab969d05a2722 172 SMART SM00563 17 129 3.2E-21 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PGJ_RS02525 2cc55c269fa42d5696fab969d05a2722 172 Pfam PF01553 Acyltransferase 15 122 3.1E-11 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PGJ_RS08985 26e27d770f94cc741ff1ccc92ea26dc0 140 Pfam PF14058 PcfK-like protein 2 140 7.1E-36 T 22-04-2016 IPR025624 PcfK-like protein PGJ_RS05195 38b743261d4b3c2ad20ff7f28e6294a6 445 Gene3D G3DSA:3.30.565.10 298 445 6.6E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS05195 38b743261d4b3c2ad20ff7f28e6294a6 445 SMART SM00387 338 445 4.7E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS05195 38b743261d4b3c2ad20ff7f28e6294a6 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 442 4.2E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS05195 38b743261d4b3c2ad20ff7f28e6294a6 445 Gene3D G3DSA:3.30.450.20 109 166 1.1E-8 T 22-04-2016 PGJ_RS05195 38b743261d4b3c2ad20ff7f28e6294a6 445 PANTHER PTHR24423 10 19 8.2E-33 T 22-04-2016 PGJ_RS05195 38b743261d4b3c2ad20ff7f28e6294a6 445 PANTHER PTHR24423 100 445 8.2E-33 T 22-04-2016 PGJ_RS05195 38b743261d4b3c2ad20ff7f28e6294a6 445 SUPERFAMILY SSF55874 301 445 2.23E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS05195 38b743261d4b3c2ad20ff7f28e6294a6 445 Pfam PF13188 PAS domain 117 154 4.6E-5 T 22-04-2016 IPR000014 PAS domain PGJ_RS05195 38b743261d4b3c2ad20ff7f28e6294a6 445 SUPERFAMILY SSF55785 104 166 3.05E-8 T 22-04-2016 IPR000014 PAS domain PGJ_RS05195 38b743261d4b3c2ad20ff7f28e6294a6 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 1.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS05195 38b743261d4b3c2ad20ff7f28e6294a6 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 1.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS05195 38b743261d4b3c2ad20ff7f28e6294a6 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 1.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS04890 cb3f375fec5a111e045b287e245d2442 235 Pfam PF01609 Transposase DDE domain 143 228 1.4E-9 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS04890 cb3f375fec5a111e045b287e245d2442 235 PANTHER PTHR35604 12 158 6.3E-21 T 22-04-2016 PGJ_RS04890 cb3f375fec5a111e045b287e245d2442 235 Pfam PF05598 Transposase domain (DUF772) 59 133 5.7E-22 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS08095 5d9804f8773cef9a654edf5381d29a00 221 Pfam PF13649 Methyltransferase domain 58 153 5.5E-21 T 22-04-2016 PGJ_RS08095 5d9804f8773cef9a654edf5381d29a00 221 PANTHER PTHR10108 46 208 8.4E-27 T 22-04-2016 PGJ_RS08095 5d9804f8773cef9a654edf5381d29a00 221 SUPERFAMILY SSF53335 6 209 2.28E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS08095 5d9804f8773cef9a654edf5381d29a00 221 Gene3D G3DSA:3.40.50.150 6 208 2.1E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS00885 3227932ee35a440d4146323e222e8a15 170 PANTHER PTHR35089 2 169 8.8E-42 T 22-04-2016 PGJ_RS00885 3227932ee35a440d4146323e222e8a15 170 Gene3D G3DSA:3.30.910.20 97 166 8.5E-23 T 22-04-2016 PGJ_RS00885 3227932ee35a440d4146323e222e8a15 170 Gene3D G3DSA:3.30.910.20 10 56 8.5E-23 T 22-04-2016 PGJ_RS00885 3227932ee35a440d4146323e222e8a15 170 SMART SM00935 8 167 4.4E-49 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 PGJ_RS00885 3227932ee35a440d4146323e222e8a15 170 PANTHER PTHR35089:SF1 2 169 8.8E-42 T 22-04-2016 PGJ_RS00885 3227932ee35a440d4146323e222e8a15 170 SUPERFAMILY SSF111384 20 166 5.62E-31 T 22-04-2016 IPR024930 Skp domain PGJ_RS00885 3227932ee35a440d4146323e222e8a15 170 Pfam PF03938 Outer membrane protein (OmpH-like) 11 166 3.3E-39 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 PGJ_RS07260 4065cdffacb8d5dee1471ef1ba0248e3 300 PANTHER PTHR11088 10 286 9.5E-76 T 22-04-2016 PGJ_RS07260 4065cdffacb8d5dee1471ef1ba0248e3 300 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 289 1.8E-71 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PGJ_RS07260 4065cdffacb8d5dee1471ef1ba0248e3 300 Gene3D G3DSA:1.10.287.890 202 280 4.6E-25 T 22-04-2016 PGJ_RS07260 4065cdffacb8d5dee1471ef1ba0248e3 300 SUPERFAMILY SSF52540 7 46 1.12E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07260 4065cdffacb8d5dee1471ef1ba0248e3 300 SUPERFAMILY SSF52540 177 228 1.12E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07260 4065cdffacb8d5dee1471ef1ba0248e3 300 Pfam PF01715 IPP transferase 41 282 4.4E-62 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PGJ_RS07260 4065cdffacb8d5dee1471ef1ba0248e3 300 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 300 24.205 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PGJ_RS07260 4065cdffacb8d5dee1471ef1ba0248e3 300 SUPERFAMILY SSF52540 8 157 3.72E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07260 4065cdffacb8d5dee1471ef1ba0248e3 300 Gene3D G3DSA:3.40.50.300 6 175 6.3E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07115 64508330108061a8a218a8322576deed 128 SUPERFAMILY SSF54211 3 128 1.09E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS07115 64508330108061a8a218a8322576deed 128 Pfam PF00380 Ribosomal protein S9/S16 8 128 9.9E-45 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07115 64508330108061a8a218a8322576deed 128 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 128 27.997 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid PGJ_RS07115 64508330108061a8a218a8322576deed 128 PANTHER PTHR21569 4 128 4.3E-62 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07115 64508330108061a8a218a8322576deed 128 Gene3D G3DSA:3.30.230.10 3 128 1.1E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS07115 64508330108061a8a218a8322576deed 128 ProSitePatterns PS00360 Ribosomal protein S9 signature. 67 85 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 PGJ_RS04750 8ea03b79434966ec9d995e813f5b7a78 367 Pfam PF13102 Phage integrase SAM-like domain 8 143 4.1E-21 T 22-04-2016 IPR025269 Phage integrase SAM-like domain PGJ_RS04750 8ea03b79434966ec9d995e813f5b7a78 367 Pfam PF00589 Phage integrase family 200 352 8.6E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS04750 8ea03b79434966ec9d995e813f5b7a78 367 PANTHER PTHR30349:SF22 16 366 4.5E-108 T 22-04-2016 PGJ_RS04750 8ea03b79434966ec9d995e813f5b7a78 367 Gene3D G3DSA:1.10.443.10 197 364 8.0E-34 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS04750 8ea03b79434966ec9d995e813f5b7a78 367 SUPERFAMILY SSF56349 97 362 2.74E-51 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS04750 8ea03b79434966ec9d995e813f5b7a78 367 PANTHER PTHR30349 16 366 4.5E-108 T 22-04-2016 PGJ_RS09635 215236f6b0887fca10e408bd6161e6b8 228 PANTHER PTHR39963 1 216 1.3E-27 T 22-04-2016 PGJ_RS09635 215236f6b0887fca10e408bd6161e6b8 228 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 145 218 1.2E-20 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 PGJ_RS09635 215236f6b0887fca10e408bd6161e6b8 228 Gene3D G3DSA:3.40.50.150 3 219 2.1E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS05330 3a0dfc428429e7a104429b6e9e0bfd41 712 PANTHER PTHR10795 64 402 7.4E-27 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related PGJ_RS05330 3a0dfc428429e7a104429b6e9e0bfd41 712 PANTHER PTHR10795:SF419 64 402 7.4E-27 T 22-04-2016 PGJ_RS05330 3a0dfc428429e7a104429b6e9e0bfd41 712 Pfam PF00082 Subtilase family 137 394 2.3E-24 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PGJ_RS05330 3a0dfc428429e7a104429b6e9e0bfd41 712 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 196 206 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site PGJ_RS05330 3a0dfc428429e7a104429b6e9e0bfd41 712 PRINTS PR00723 Subtilisin serine protease family (S8) signature 192 205 3.0E-14 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related PGJ_RS05330 3a0dfc428429e7a104429b6e9e0bfd41 712 PRINTS PR00723 Subtilisin serine protease family (S8) signature 366 382 3.0E-14 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related PGJ_RS05330 3a0dfc428429e7a104429b6e9e0bfd41 712 PRINTS PR00723 Subtilisin serine protease family (S8) signature 135 154 3.0E-14 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related PGJ_RS05330 3a0dfc428429e7a104429b6e9e0bfd41 712 SUPERFAMILY SSF52743 196 437 3.93E-42 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PGJ_RS05330 3a0dfc428429e7a104429b6e9e0bfd41 712 SUPERFAMILY SSF52743 111 159 3.93E-42 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PGJ_RS05330 3a0dfc428429e7a104429b6e9e0bfd41 712 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 367 377 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site PGJ_RS05330 3a0dfc428429e7a104429b6e9e0bfd41 712 Gene3D G3DSA:3.40.50.200 77 437 3.6E-48 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PGJ_RS05330 3a0dfc428429e7a104429b6e9e0bfd41 712 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 627 712 1.3E-9 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 17 260 3.6E-52 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 Gene3D G3DSA:2.40.37.10 246 378 2.7E-41 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 2 380 5.6E-118 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 33 51 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 PANTHER PTHR11482 2 374 2.2E-129 T 22-04-2016 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 264 374 1.5E-18 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 SUPERFAMILY SSF50621 233 378 1.26E-42 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 166 179 9.1E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 33 51 9.1E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 53 65 9.1E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 358 371 9.1E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 249 268 9.1E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 Gene3D G3DSA:3.20.20.10 13 245 9.6E-68 T 22-04-2016 IPR029066 PLP-binding barrel PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 1 382 32.898 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 SUPERFAMILY SSF51419 3 261 1.01E-67 T 22-04-2016 IPR029066 PLP-binding barrel PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 PRINTS PR01181 Diaminopimelate decarboxylase signature 368 382 4.6E-21 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 PRINTS PR01181 Diaminopimelate decarboxylase signature 277 295 4.6E-21 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 PRINTS PR01181 Diaminopimelate decarboxylase signature 51 68 4.6E-21 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 PRINTS PR01181 Diaminopimelate decarboxylase signature 140 149 4.6E-21 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PGJ_RS09835 ea7d83d3226cf6fe2533818482c80aa2 382 PANTHER PTHR11482:SF5 2 374 2.2E-129 T 22-04-2016 PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 SUPERFAMILY SSF52540 734 942 9.42E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 Pfam PF00271 Helicase conserved C-terminal domain 761 861 8.5E-18 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 SUPERFAMILY SSF141259 425 493 3.53E-17 T 22-04-2016 IPR003711 CarD-like/TRCF domain PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 Gene3D G3DSA:3.40.50.300 750 915 5.3E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 PANTHER PTHR14025:SF21 347 1068 0.0 T 22-04-2016 PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 SUPERFAMILY SSF143517 962 1107 3.4E-26 T 22-04-2016 PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 Pfam PF03461 TRCF domain 973 1063 5.8E-22 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 SMART SM00487 552 742 1.1E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 323 1043 2.0E-266 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 SUPERFAMILY SSF52540 318 414 1.92E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 SUPERFAMILY SSF52540 491 736 3.79E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 PANTHER PTHR14025 347 1068 0.0 T 22-04-2016 PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 Gene3D G3DSA:3.40.50.300 540 738 2.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 SMART SM01058 430 528 3.7E-38 T 22-04-2016 IPR003711 CarD-like/TRCF domain PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 Pfam PF00270 DEAD/DEAH box helicase 577 716 1.4E-15 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 SMART SM00490 778 862 5.3E-19 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 SMART SM00982 970 1071 9.2E-25 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 42 1052 26.9 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 SUPERFAMILY SSF52540 27 307 5.32E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 Pfam PF02559 CarD-like/TRCF domain 431 527 3.8E-22 T 22-04-2016 IPR003711 CarD-like/TRCF domain PGJ_RS07665 bd9871d627fa0ccdf20947acf1560ef7 1122 Gene3D G3DSA:3.30.2060.10 146 223 2.1E-12 T 22-04-2016 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 Pfam PF01336 OB-fold nucleic acid binding domain 57 139 8.3E-17 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 Gene3D G3DSA:2.40.50.140 7 148 1.6E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 Pfam PF00152 tRNA synthetases class II (D, K and N) 164 500 3.0E-84 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 SUPERFAMILY SSF55681 163 501 2.3E-117 T 22-04-2016 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 PANTHER PTHR22594:SF4 2 514 7.2E-253 T 22-04-2016 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 PRINTS PR00982 Lysyl-tRNA synthetase signature 263 280 1.0E-37 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 PRINTS PR00982 Lysyl-tRNA synthetase signature 245 258 1.0E-37 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 PRINTS PR00982 Lysyl-tRNA synthetase signature 216 232 1.0E-37 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 PRINTS PR00982 Lysyl-tRNA synthetase signature 385 401 1.0E-37 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 PRINTS PR00982 Lysyl-tRNA synthetase signature 200 210 1.0E-37 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 12 503 43.38 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 6 504 7.2E-193 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 PANTHER PTHR22594 2 514 7.2E-253 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 SUPERFAMILY SSF50249 5 148 1.01E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02445 22400f6b5804056a42831502fe04555e 578 Gene3D G3DSA:3.30.930.10 160 500 2.2E-119 T 22-04-2016 PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 PRINTS PR00775 90kDa heat shock protein signature 90 107 2.6E-35 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 PRINTS PR00775 90kDa heat shock protein signature 183 201 2.6E-35 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 PRINTS PR00775 90kDa heat shock protein signature 24 46 2.6E-35 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 PRINTS PR00775 90kDa heat shock protein signature 72 89 2.6E-35 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 PRINTS PR00775 90kDa heat shock protein signature 165 182 2.6E-35 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 PRINTS PR00775 90kDa heat shock protein signature 114 136 2.6E-35 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 SUPERFAMILY SSF54211 226 477 1.21E-65 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 23 32 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 SUPERFAMILY SSF55874 2 207 5.37E-54 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 Pfam PF00183 Hsp90 protein 214 579 2.0E-46 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 627 21.036 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 PANTHER PTHR11528 18 395 1.8E-106 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 Gene3D G3DSA:3.30.565.10 5 234 1.5E-61 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 176 1.6E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 SMART SM00387 25 177 3.5E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS00190 2785248d2c3fdefc1196ccca83363df0 684 PIRSF PIRSF002583 1 659 5.8E-168 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 SUPERFAMILY SSF50249 139 206 1.72E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 Gene3D G3DSA:3.30.300.20 206 284 1.5E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 SUPERFAMILY SSF69705 8 132 1.02E-30 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 Pfam PF08529 NusA N-terminal domain 10 131 7.3E-28 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 Pfam PF13184 NusA-like KH domain 237 304 1.6E-25 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 10 348 7.1E-124 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 Gene3D G3DSA:2.40.50.140 142 205 1.5E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 PANTHER PTHR22648:SF0 6 444 2.3E-106 T 22-04-2016 PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 PANTHER PTHR22648 6 444 2.3E-106 T 22-04-2016 PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 Gene3D G3DSA:3.30.300.20 286 348 6.8E-18 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 4 426 26.012 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 SUPERFAMILY SSF54814 287 348 1.63E-8 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 SUPERFAMILY SSF54814 207 284 5.62E-27 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PGJ_RS01150 1b2cd7b971c288719f85331dfa90a89a 444 Gene3D G3DSA:3.30.1480.10 8 131 1.5E-30 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PGJ_RS02945 dffa764051606c90e5672b0008e75fc4 92 SMART SM00411 1 90 9.9E-25 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS02945 dffa764051606c90e5672b0008e75fc4 92 SUPERFAMILY SSF47729 1 88 3.83E-25 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS02945 dffa764051606c90e5672b0008e75fc4 92 Gene3D G3DSA:4.10.520.10 1 91 4.5E-28 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS02945 dffa764051606c90e5672b0008e75fc4 92 PANTHER PTHR33175 1 85 1.3E-29 T 22-04-2016 PGJ_RS02945 dffa764051606c90e5672b0008e75fc4 92 Pfam PF00216 Bacterial DNA-binding protein 1 89 6.5E-27 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS02945 dffa764051606c90e5672b0008e75fc4 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.7E-5 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS02945 dffa764051606c90e5672b0008e75fc4 92 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.7E-5 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS02725 9ce8b55ed5068da67f81c881d47caca4 220 Gene3D G3DSA:3.40.50.620 5 219 2.4E-60 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS02725 9ce8b55ed5068da67f81c881d47caca4 220 PIRSF PIRSF006293 3 220 8.2E-66 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PGJ_RS02725 9ce8b55ed5068da67f81c881d47caca4 220 SUPERFAMILY SSF52402 6 218 1.8E-52 T 22-04-2016 PGJ_RS02725 9ce8b55ed5068da67f81c881d47caca4 220 PANTHER PTHR11587:SF3 2 219 2.0E-46 T 22-04-2016 PGJ_RS02725 9ce8b55ed5068da67f81c881d47caca4 220 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 5 216 46.613 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PGJ_RS02725 9ce8b55ed5068da67f81c881d47caca4 220 Pfam PF06508 Queuosine biosynthesis protein QueC 7 210 3.9E-53 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PGJ_RS02725 9ce8b55ed5068da67f81c881d47caca4 220 PANTHER PTHR11587 2 219 2.0E-46 T 22-04-2016 PGJ_RS02725 9ce8b55ed5068da67f81c881d47caca4 220 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 8 203 2.2E-47 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PGJ_RS07490 4808324bc8f2e910043647e1f7e0a524 313 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 6 295 1.0E-71 T 22-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family PGJ_RS07490 4808324bc8f2e910043647e1f7e0a524 313 Pfam PF11751 Protein of unknown function (DUF3308) 23 293 8.9E-68 T 22-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family PGJ_RS02295 58dbd244a8997700a7489b99326ac76e 321 SUPERFAMILY SSF161111 39 230 1.7E-47 T 22-04-2016 PGJ_RS02295 58dbd244a8997700a7489b99326ac76e 321 PANTHER PTHR11562 4 321 1.4E-86 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PGJ_RS02295 58dbd244a8997700a7489b99326ac76e 321 Pfam PF01545 Cation efflux family 40 229 1.0E-40 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PGJ_RS02295 58dbd244a8997700a7489b99326ac76e 321 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 39 313 3.7E-65 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PGJ_RS02295 58dbd244a8997700a7489b99326ac76e 321 Gene3D G3DSA:1.20.1510.10 39 229 3.6E-46 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain PGJ_RS02295 58dbd244a8997700a7489b99326ac76e 321 PANTHER PTHR11562:SF17 4 321 1.4E-86 T 22-04-2016 PGJ_RS02295 58dbd244a8997700a7489b99326ac76e 321 SUPERFAMILY SSF160240 233 314 1.11E-6 T 22-04-2016 PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 PIRSF PIRSF500134 1 438 1.2E-209 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 PANTHER PTHR11374:SF18 1 440 7.1E-241 T 22-04-2016 PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 Gene3D G3DSA:1.20.5.100 203 234 5.0E-19 T 22-04-2016 PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 SUPERFAMILY SSF48179 204 301 1.77E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 296 1.6E-39 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 PIRSF PIRSF000124 1 433 1.2E-145 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 420 9.0E-31 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 SUPERFAMILY SSF51735 1 192 1.53E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 Gene3D G3DSA:3.40.50.720 235 437 8.9E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 418 5.3E-138 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 SMART SM00984 320 422 1.4E-46 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 PANTHER PTHR11374 1 440 7.1E-241 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 SUPERFAMILY SSF52413 306 421 3.27E-34 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 Gene3D G3DSA:3.40.50.720 1 201 2.0E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03855 c2d10f6c60bddcaad3c8a0d2d240c52b 444 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 185 4.8E-67 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 PGJ_RS08495 90412cd33a1f0f4e10259d2ba3f72f83 339 Gene3D G3DSA:3.90.25.10 299 334 3.7E-8 T 22-04-2016 PGJ_RS08495 90412cd33a1f0f4e10259d2ba3f72f83 339 PANTHER PTHR10366 292 339 6.8E-50 T 22-04-2016 PGJ_RS08495 90412cd33a1f0f4e10259d2ba3f72f83 339 PANTHER PTHR10366 5 267 6.8E-50 T 22-04-2016 PGJ_RS08495 90412cd33a1f0f4e10259d2ba3f72f83 339 Gene3D G3DSA:3.40.50.720 3 249 5.9E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS08495 90412cd33a1f0f4e10259d2ba3f72f83 339 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 231 1.9E-27 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PGJ_RS08495 90412cd33a1f0f4e10259d2ba3f72f83 339 SUPERFAMILY SSF51735 4 333 1.06E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS08505 70eb38154004e4c1fb4ad31b7ab3489d 431 PANTHER PTHR21432 1 430 4.6E-178 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PGJ_RS08505 70eb38154004e4c1fb4ad31b7ab3489d 431 SUPERFAMILY SSF100950 191 428 3.09E-66 T 22-04-2016 PGJ_RS08505 70eb38154004e4c1fb4ad31b7ab3489d 431 SUPERFAMILY SSF100950 3 224 4.49E-43 T 22-04-2016 PGJ_RS08505 70eb38154004e4c1fb4ad31b7ab3489d 431 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 5 188 7.0E-25 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PGJ_RS08505 70eb38154004e4c1fb4ad31b7ab3489d 431 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 273 425 1.0E-64 T 22-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PGJ_RS08505 70eb38154004e4c1fb4ad31b7ab3489d 431 Gene3D G3DSA:3.40.1080.10 7 184 2.2E-60 T 22-04-2016 PGJ_RS08505 70eb38154004e4c1fb4ad31b7ab3489d 431 PANTHER PTHR21432:SF18 1 430 4.6E-178 T 22-04-2016 PGJ_RS08505 70eb38154004e4c1fb4ad31b7ab3489d 431 Gene3D G3DSA:3.40.810.20 194 430 3.9E-52 T 22-04-2016 PGJ_RS02215 a03279f8e1e7f67061fa4ab5a9a452fb 161 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 22 156 1.1E-48 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS02215 a03279f8e1e7f67061fa4ab5a9a452fb 161 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 17 161 26.189 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS02215 a03279f8e1e7f67061fa4ab5a9a452fb 161 PANTHER PTHR21058 19 161 2.2E-67 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS02215 a03279f8e1e7f67061fa4ab5a9a452fb 161 SUPERFAMILY SSF52121 13 158 5.36E-56 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS02215 a03279f8e1e7f67061fa4ab5a9a452fb 161 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 22 158 6.6E-55 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS02215 a03279f8e1e7f67061fa4ab5a9a452fb 161 Gene3D G3DSA:3.40.50.960 10 158 3.6E-60 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS00540 0ad7c0f61332d58f35dba36e489169ae 353 SUPERFAMILY SSF53448 16 239 1.03E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS00540 0ad7c0f61332d58f35dba36e489169ae 353 PANTHER PTHR22916:SF24 16 248 3.4E-53 T 22-04-2016 PGJ_RS00540 0ad7c0f61332d58f35dba36e489169ae 353 Gene3D G3DSA:3.90.550.10 16 207 4.4E-56 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS00540 0ad7c0f61332d58f35dba36e489169ae 353 PANTHER PTHR22916 16 248 3.4E-53 T 22-04-2016 PGJ_RS00540 0ad7c0f61332d58f35dba36e489169ae 353 Pfam PF00535 Glycosyl transferase family 2 19 158 6.6E-39 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PGJ_RS07545 f5532f09d8e8f889b5e6e1cd8dd582a3 606 SMART SM00812 50 404 1.3E-13 T 22-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 PGJ_RS07545 f5532f09d8e8f889b5e6e1cd8dd582a3 606 SUPERFAMILY SSF49785 467 592 9.22E-15 T 22-04-2016 IPR008979 Galactose-binding domain-like PGJ_RS07545 f5532f09d8e8f889b5e6e1cd8dd582a3 606 Pfam PF01120 Alpha-L-fucosidase 89 374 7.6E-39 T 22-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 PGJ_RS07545 f5532f09d8e8f889b5e6e1cd8dd582a3 606 Gene3D G3DSA:2.60.120.260 509 603 4.8E-11 T 22-04-2016 IPR008979 Galactose-binding domain-like PGJ_RS07545 f5532f09d8e8f889b5e6e1cd8dd582a3 606 Pfam PF00754 F5/8 type C domain 490 596 1.5E-11 T 22-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain PGJ_RS07545 f5532f09d8e8f889b5e6e1cd8dd582a3 606 Gene3D G3DSA:3.20.20.80 296 374 4.3E-100 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS07545 f5532f09d8e8f889b5e6e1cd8dd582a3 606 Gene3D G3DSA:3.20.20.80 48 261 4.3E-100 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS07545 f5532f09d8e8f889b5e6e1cd8dd582a3 606 PANTHER PTHR10030 51 548 3.3E-223 T 22-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 PGJ_RS07545 f5532f09d8e8f889b5e6e1cd8dd582a3 606 SUPERFAMILY SSF51445 295 374 1.11E-87 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS07545 f5532f09d8e8f889b5e6e1cd8dd582a3 606 SUPERFAMILY SSF51445 51 260 1.11E-87 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS07545 f5532f09d8e8f889b5e6e1cd8dd582a3 606 PANTHER PTHR10030:SF28 51 548 3.3E-223 T 22-04-2016 PGJ_RS09250 1820ac25f2e69702f75d808b3fed71ae 365 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 329 2.8E-111 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PGJ_RS09250 1820ac25f2e69702f75d808b3fed71ae 365 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 36 326 2.3E-99 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PGJ_RS09250 1820ac25f2e69702f75d808b3fed71ae 365 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 330 29.05 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PGJ_RS09250 1820ac25f2e69702f75d808b3fed71ae 365 PANTHER PTHR30004 2 342 3.7E-131 T 22-04-2016 PGJ_RS09250 1820ac25f2e69702f75d808b3fed71ae 365 SUPERFAMILY SSF53659 5 333 1.76E-95 T 22-04-2016 PGJ_RS09250 1820ac25f2e69702f75d808b3fed71ae 365 PANTHER PTHR30004:SF6 2 342 3.7E-131 T 22-04-2016 PGJ_RS09250 1820ac25f2e69702f75d808b3fed71ae 365 Gene3D G3DSA:3.40.718.10 2 333 1.7E-114 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PGJ_RS09370 9e9dc905c85862cdb12274659a525a21 302 Gene3D G3DSA:3.30.70.1350 221 301 9.1E-20 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain PGJ_RS09370 9e9dc905c85862cdb12274659a525a21 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 223 300 1.3E-20 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain PGJ_RS09370 9e9dc905c85862cdb12274659a525a21 302 Gene3D G3DSA:1.20.1510.10 15 218 1.4E-43 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain PGJ_RS09370 9e9dc905c85862cdb12274659a525a21 302 PANTHER PTHR11562 8 301 2.1E-74 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PGJ_RS09370 9e9dc905c85862cdb12274659a525a21 302 SUPERFAMILY SSF161111 11 220 2.62E-49 T 22-04-2016 PGJ_RS09370 9e9dc905c85862cdb12274659a525a21 302 PANTHER PTHR11562:SF18 8 301 2.1E-74 T 22-04-2016 PGJ_RS09370 9e9dc905c85862cdb12274659a525a21 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 300 7.8E-62 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PGJ_RS09370 9e9dc905c85862cdb12274659a525a21 302 Pfam PF01545 Cation efflux family 19 219 3.5E-43 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PGJ_RS09370 9e9dc905c85862cdb12274659a525a21 302 SUPERFAMILY SSF160240 222 301 1.44E-18 T 22-04-2016 PGJ_RS05445 0db097f6697f62b18edf10cb7ad4869d 517 PANTHER PTHR24423 144 239 1.4E-33 T 22-04-2016 PGJ_RS05445 0db097f6697f62b18edf10cb7ad4869d 517 PANTHER PTHR24423 293 509 1.4E-33 T 22-04-2016 PGJ_RS05445 0db097f6697f62b18edf10cb7ad4869d 517 Gene3D G3DSA:3.30.450.20 298 417 1.8E-44 T 22-04-2016 PGJ_RS05445 0db097f6697f62b18edf10cb7ad4869d 517 PANTHER PTHR24423:SF558 144 239 1.4E-33 T 22-04-2016 PGJ_RS05445 0db097f6697f62b18edf10cb7ad4869d 517 PANTHER PTHR24423:SF558 293 509 1.4E-33 T 22-04-2016 PGJ_RS05445 0db097f6697f62b18edf10cb7ad4869d 517 Pfam PF13596 PAS domain 297 401 2.4E-27 T 22-04-2016 PGJ_RS05445 0db097f6697f62b18edf10cb7ad4869d 517 Pfam PF08984 Domain of unknown function (DUF1858) 439 498 3.0E-7 T 22-04-2016 IPR015077 Domain of unknown function DUF1858 PGJ_RS05445 0db097f6697f62b18edf10cb7ad4869d 517 SUPERFAMILY SSF55785 296 394 5.9E-7 T 22-04-2016 IPR000014 PAS domain PGJ_RS05445 0db097f6697f62b18edf10cb7ad4869d 517 Pfam PF01814 Hemerythrin HHE cation binding domain 96 215 5.5E-9 T 22-04-2016 IPR012312 Haemerythrin-like PGJ_RS05445 0db097f6697f62b18edf10cb7ad4869d 517 Gene3D G3DSA:1.20.120.520 91 297 1.8E-47 T 22-04-2016 PGJ_RS05445 0db097f6697f62b18edf10cb7ad4869d 517 Gene3D G3DSA:1.10.3910.10 438 505 6.7E-4 T 22-04-2016 IPR015077 Domain of unknown function DUF1858 PGJ_RS07320 9f112a60a070340985d79a56756e851e 497 Gene3D G3DSA:1.10.275.10 5 200 6.6E-63 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal PGJ_RS07320 9f112a60a070340985d79a56756e851e 497 Pfam PF00221 Aromatic amino acid lyase 14 469 6.5E-176 T 22-04-2016 IPR001106 Aromatic amino acid lyase PGJ_RS07320 9f112a60a070340985d79a56756e851e 497 PANTHER PTHR10362 8 494 1.3E-211 T 22-04-2016 PGJ_RS07320 9f112a60a070340985d79a56756e851e 497 SUPERFAMILY SSF48557 7 496 8.63E-178 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 PGJ_RS07320 9f112a60a070340985d79a56756e851e 497 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 16 494 1.9E-176 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PGJ_RS07320 9f112a60a070340985d79a56756e851e 497 PANTHER PTHR10362:SF7 8 494 1.3E-211 T 22-04-2016 PGJ_RS07320 9f112a60a070340985d79a56756e851e 497 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 142 158 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 PGJ_RS07320 9f112a60a070340985d79a56756e851e 497 Gene3D G3DSA:1.20.200.10 201 496 2.8E-114 T 22-04-2016 PGJ_RS02020 674b1101f3663a844e7016ff3835840b 236 Pfam PF00145 C-5 cytosine-specific DNA methylase 89 230 3.4E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS02020 674b1101f3663a844e7016ff3835840b 236 Gene3D G3DSA:3.90.120.10 173 219 2.6E-4 T 22-04-2016 PGJ_RS02020 674b1101f3663a844e7016ff3835840b 236 SUPERFAMILY SSF53335 140 230 1.22E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS02020 674b1101f3663a844e7016ff3835840b 236 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 211 229 - T 22-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 PGJ_RS02165 4c837e3f63f30d9ed71e2721ae80b468 258 PANTHER PTHR13767:SF9 1 233 5.5E-115 T 22-04-2016 PGJ_RS02165 4c837e3f63f30d9ed71e2721ae80b468 258 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 44 188 4.0E-52 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 PGJ_RS02165 4c837e3f63f30d9ed71e2721ae80b468 258 SUPERFAMILY SSF55120 14 234 8.02E-71 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS02165 4c837e3f63f30d9ed71e2721ae80b468 258 PANTHER PTHR13767 1 233 5.5E-115 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS02165 4c837e3f63f30d9ed71e2721ae80b468 258 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 15 227 4.6E-63 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS02165 4c837e3f63f30d9ed71e2721ae80b468 258 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 189 230 4.4E-10 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal PGJ_RS02165 4c837e3f63f30d9ed71e2721ae80b468 258 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 12 258 15.369 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS02685 cd42f87461199b9a303d51312657abff 176 Gene3D G3DSA:3.30.930.10 60 170 9.5E-4 T 22-04-2016 PGJ_RS02500 8e7c899ad316414218d7f37b33c3020e 342 Pfam PF01609 Transposase DDE domain 72 310 3.7E-13 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS02500 8e7c899ad316414218d7f37b33c3020e 342 Pfam PF13808 DDE_Tnp_1-associated 1 63 9.1E-10 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal PGJ_RS02500 8e7c899ad316414218d7f37b33c3020e 342 PANTHER PTHR30298 1 315 1.1E-52 T 22-04-2016 PGJ_RS03375 3c689261e995268b886d82b83bfcafca 298 PANTHER PTHR39560:SF1 151 295 1.6E-28 T 22-04-2016 PGJ_RS03375 3c689261e995268b886d82b83bfcafca 298 PANTHER PTHR39560 151 295 1.6E-28 T 22-04-2016 PGJ_RS03375 3c689261e995268b886d82b83bfcafca 298 Pfam PF02661 Fic/DOC family 149 234 7.0E-12 T 22-04-2016 IPR003812 Fido domain PGJ_RS03375 3c689261e995268b886d82b83bfcafca 298 SUPERFAMILY SSF140931 124 294 4.32E-38 T 22-04-2016 IPR003812 Fido domain PGJ_RS03375 3c689261e995268b886d82b83bfcafca 298 Gene3D G3DSA:1.10.3290.10 122 297 1.1E-66 T 22-04-2016 IPR003812 Fido domain PGJ_RS03375 3c689261e995268b886d82b83bfcafca 298 Pfam PF02498 BRO family, N-terminal domain 20 117 1.6E-5 T 22-04-2016 IPR003497 BRO N-terminal domain PGJ_RS03375 3c689261e995268b886d82b83bfcafca 298 SMART SM01040 20 115 0.0018 T 22-04-2016 IPR003497 BRO N-terminal domain PGJ_RS02955 c74108e4a4d86d4ceeaf9d02e78228b2 207 Hamap MF_00017 Recombination protein RecR [recR]. 1 201 89.198 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PGJ_RS02955 c74108e4a4d86d4ceeaf9d02e78228b2 207 Pfam PF02132 RecR protein 43 81 1.3E-16 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger PGJ_RS02955 c74108e4a4d86d4ceeaf9d02e78228b2 207 Pfam PF13662 Toprim domain 83 174 2.2E-23 T 22-04-2016 IPR006171 Toprim domain PGJ_RS02955 c74108e4a4d86d4ceeaf9d02e78228b2 207 SUPERFAMILY SSF111304 7 201 2.22E-71 T 22-04-2016 IPR023627 Recombination protein RecR PGJ_RS02955 c74108e4a4d86d4ceeaf9d02e78228b2 207 PANTHER PTHR30446:SF0 4 203 7.7E-107 T 22-04-2016 PGJ_RS02955 c74108e4a4d86d4ceeaf9d02e78228b2 207 ProSitePatterns PS01300 RecR protein signature. 60 81 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 PGJ_RS02955 c74108e4a4d86d4ceeaf9d02e78228b2 207 PANTHER PTHR30446 4 203 7.7E-107 T 22-04-2016 PGJ_RS02955 c74108e4a4d86d4ceeaf9d02e78228b2 207 SMART SM00493 83 168 1.8E-4 T 22-04-2016 IPR006171 Toprim domain PGJ_RS02955 c74108e4a4d86d4ceeaf9d02e78228b2 207 TIGRFAM TIGR00615 recR: recombination protein RecR 7 198 7.8E-70 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PGJ_RS09145 79c422f72a9c40dbd6408c282e58dcae 454 SUPERFAMILY SSF52402 12 227 1.08E-56 T 22-04-2016 PGJ_RS09145 79c422f72a9c40dbd6408c282e58dcae 454 Pfam PF11734 TilS substrate C-terminal domain 378 439 2.2E-8 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PGJ_RS09145 79c422f72a9c40dbd6408c282e58dcae 454 Gene3D G3DSA:3.40.50.620 7 178 5.0E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS09145 79c422f72a9c40dbd6408c282e58dcae 454 PANTHER PTHR11807:SF2 4 443 2.1E-73 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PGJ_RS09145 79c422f72a9c40dbd6408c282e58dcae 454 PANTHER PTHR11807 4 443 2.1E-73 T 22-04-2016 PGJ_RS09145 79c422f72a9c40dbd6408c282e58dcae 454 Pfam PF01171 PP-loop family 26 202 2.9E-48 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal PGJ_RS09145 79c422f72a9c40dbd6408c282e58dcae 454 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 9 304 23.198 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PGJ_RS09145 79c422f72a9c40dbd6408c282e58dcae 454 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 378 421 8.4E-11 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PGJ_RS09145 79c422f72a9c40dbd6408c282e58dcae 454 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 26 206 3.1E-51 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PGJ_RS09145 79c422f72a9c40dbd6408c282e58dcae 454 SMART SM00977 376 448 1.1E-17 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PGJ_RS09145 79c422f72a9c40dbd6408c282e58dcae 454 SUPERFAMILY SSF56037 370 439 2.62E-13 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PGJ_RS03935 498c73e2cb8bfc5720277c021f3522ea 439 Gene3D G3DSA:3.40.50.880 251 434 1.8E-19 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS03935 498c73e2cb8bfc5720277c021f3522ea 439 PANTHER PTHR21343 253 430 2.4E-128 T 22-04-2016 PGJ_RS03935 498c73e2cb8bfc5720277c021f3522ea 439 PANTHER PTHR21343 10 237 2.4E-128 T 22-04-2016 PGJ_RS03935 498c73e2cb8bfc5720277c021f3522ea 439 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 251 431 3.0E-35 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 PGJ_RS03935 498c73e2cb8bfc5720277c021f3522ea 439 PANTHER PTHR21343:SF6 10 237 2.4E-128 T 22-04-2016 PGJ_RS03935 498c73e2cb8bfc5720277c021f3522ea 439 SUPERFAMILY SSF52317 251 438 3.28E-26 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS03935 498c73e2cb8bfc5720277c021f3522ea 439 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 12 195 1.1E-20 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PGJ_RS03935 498c73e2cb8bfc5720277c021f3522ea 439 Gene3D G3DSA:3.40.50.300 10 198 5.8E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03935 498c73e2cb8bfc5720277c021f3522ea 439 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 11 431 5.7E-107 T 22-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 PGJ_RS03935 498c73e2cb8bfc5720277c021f3522ea 439 PANTHER PTHR21343:SF6 253 430 2.4E-128 T 22-04-2016 PGJ_RS03935 498c73e2cb8bfc5720277c021f3522ea 439 SUPERFAMILY SSF52540 9 196 2.36E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03935 498c73e2cb8bfc5720277c021f3522ea 439 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 7 432 37.567 T 22-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 PGJ_RS02690 26021eb599565b82a0d2c5780385ee0b 190 PANTHER PTHR10516:SF316 139 186 3.8E-16 T 22-04-2016 PGJ_RS02690 26021eb599565b82a0d2c5780385ee0b 190 PANTHER PTHR10516:SF316 1 86 3.8E-16 T 22-04-2016 PGJ_RS02690 26021eb599565b82a0d2c5780385ee0b 190 Gene3D G3DSA:3.10.50.40 132 147 2.0E-10 T 22-04-2016 PGJ_RS02690 26021eb599565b82a0d2c5780385ee0b 190 Gene3D G3DSA:3.10.50.40 5 72 2.0E-10 T 22-04-2016 PGJ_RS02690 26021eb599565b82a0d2c5780385ee0b 190 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 78 1.3E-6 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PGJ_RS02690 26021eb599565b82a0d2c5780385ee0b 190 PANTHER PTHR10516 139 186 3.8E-16 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PGJ_RS02690 26021eb599565b82a0d2c5780385ee0b 190 PANTHER PTHR10516 1 86 3.8E-16 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PGJ_RS02690 26021eb599565b82a0d2c5780385ee0b 190 SUPERFAMILY SSF54534 3 148 1.51E-26 T 22-04-2016 PGJ_RS07860 162cabb0442d70ba2743dfed259b2f7f 360 PANTHER PTHR32154:SF19 3 356 9.6E-160 T 22-04-2016 PGJ_RS07860 162cabb0442d70ba2743dfed259b2f7f 360 PANTHER PTHR32154 3 356 9.6E-160 T 22-04-2016 PGJ_RS07860 162cabb0442d70ba2743dfed259b2f7f 360 Gene3D G3DSA:3.40.50.970 3 192 1.2E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS07860 162cabb0442d70ba2743dfed259b2f7f 360 SUPERFAMILY SSF52518 4 245 1.01E-54 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS07860 162cabb0442d70ba2743dfed259b2f7f 360 SUPERFAMILY SSF52922 248 356 1.57E-28 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PGJ_RS07860 162cabb0442d70ba2743dfed259b2f7f 360 Gene3D G3DSA:3.40.50.920 247 356 2.4E-28 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PGJ_RS07860 162cabb0442d70ba2743dfed259b2f7f 360 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 191 3.5E-43 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 PGJ_RS07860 162cabb0442d70ba2743dfed259b2f7f 360 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 256 350 3.5E-26 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II PGJ_RS02375 8a3c67c0c5612977fb5f0165459328fd 236 Pfam PF11644 Protein of unknown function (DUF3256) 34 231 2.9E-58 T 22-04-2016 IPR021670 Protein of unknown function DUF3256 PGJ_RS02375 8a3c67c0c5612977fb5f0165459328fd 236 SUPERFAMILY SSF160925 38 233 2.48E-63 T 22-04-2016 PGJ_RS06790 32c7a07fd8c4f1bc6b4a6f2e55cf9830 268 Pfam PF02563 Polysaccharide biosynthesis/export protein 43 141 1.2E-21 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 PGJ_RS06790 32c7a07fd8c4f1bc6b4a6f2e55cf9830 268 Gene3D G3DSA:3.10.560.10 138 225 3.5E-19 T 22-04-2016 PGJ_RS06790 32c7a07fd8c4f1bc6b4a6f2e55cf9830 268 PANTHER PTHR33619 28 68 2.6E-38 T 22-04-2016 PGJ_RS06790 32c7a07fd8c4f1bc6b4a6f2e55cf9830 268 PANTHER PTHR33619 91 263 2.6E-38 T 22-04-2016 PGJ_RS06790 32c7a07fd8c4f1bc6b4a6f2e55cf9830 268 Pfam PF10531 SLBB domain 145 191 1.8E-7 T 22-04-2016 IPR019554 Soluble ligand binding domain PGJ_RS06790 32c7a07fd8c4f1bc6b4a6f2e55cf9830 268 Gene3D G3DSA:3.30.1950.10 52 137 6.6E-19 T 22-04-2016 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 PANTHER PTHR10909:SF305 1 379 9.2E-185 T 22-04-2016 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 4.1E-38 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 Gene3D G3DSA:2.40.110.10 121 216 4.7E-40 T 22-04-2016 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 Gene3D G3DSA:1.20.140.10 217 379 6.1E-71 T 22-04-2016 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 SUPERFAMILY SSF47203 228 379 2.74E-57 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 Gene3D G3DSA:1.10.540.10 1 120 7.3E-45 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 PIRSF PIRSF016578 2 378 1.4E-22 T 22-04-2016 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 6.7E-50 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 SUPERFAMILY SSF56645 2 242 8.77E-90 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 3.9E-29 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PGJ_RS03560 d7c7fe486f4190a5df8d1c42ad702264 379 PANTHER PTHR10909 1 379 9.2E-185 T 22-04-2016 PGJ_RS03420 8ee2fac54fe31f916df832206c581b60 463 Gene3D G3DSA:3.40.50.1110 290 451 4.7E-18 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain PGJ_RS03420 8ee2fac54fe31f916df832206c581b60 463 Gene3D G3DSA:3.40.50.1110 126 154 4.7E-18 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain PGJ_RS03420 8ee2fac54fe31f916df832206c581b60 463 SUPERFAMILY SSF52266 126 162 1.37E-18 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain PGJ_RS03420 8ee2fac54fe31f916df832206c581b60 463 SUPERFAMILY SSF52266 296 451 1.37E-18 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain PGJ_RS01900 a10b8461398da9d8af05540801ecacce 281 PANTHER PTHR20941:SF1 16 277 2.7E-103 T 22-04-2016 PGJ_RS01900 a10b8461398da9d8af05540801ecacce 281 Gene3D G3DSA:3.20.20.20 15 277 7.6E-93 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 PGJ_RS01900 a10b8461398da9d8af05540801ecacce 281 PANTHER PTHR20941 16 277 2.7E-103 T 22-04-2016 PGJ_RS01900 a10b8461398da9d8af05540801ecacce 281 SUPERFAMILY SSF51717 8 277 3.27E-89 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 PGJ_RS01900 a10b8461398da9d8af05540801ecacce 281 Pfam PF00809 Pterin binding enzyme 21 262 5.5E-70 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 PGJ_RS01900 a10b8461398da9d8af05540801ecacce 281 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 20 276 5.8E-98 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 Pfam PF10509 Galactokinase galactose-binding signature 9 56 4.1E-20 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 Gene3D G3DSA:3.30.70.890 206 381 1.7E-51 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 Pfam PF00288 GHMP kinases N terminal domain 114 179 5.4E-13 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 SUPERFAMILY SSF54211 6 199 9.87E-56 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 ProSitePatterns PS00106 Galactokinase signature. 26 37 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 117 128 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 SUPERFAMILY SSF55060 202 382 3.06E-44 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 PIRSF PIRSF000530 1 384 4.7E-121 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 Gene3D G3DSA:3.30.230.10 6 205 4.8E-66 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 PRINTS PR00473 Galactokinase signature 266 280 1.3E-21 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 PRINTS PR00473 Galactokinase signature 88 99 1.3E-21 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 PRINTS PR00473 Galactokinase signature 26 44 1.3E-21 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 PRINTS PR00473 Galactokinase signature 108 126 1.3E-21 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 PRINTS PR00959 Mevalonate kinase family signature 115 137 4.4E-40 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 PRINTS PR00959 Mevalonate kinase family signature 24 48 4.4E-40 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 PRINTS PR00959 Mevalonate kinase family signature 329 346 4.4E-40 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 PRINTS PR00959 Mevalonate kinase family signature 159 178 4.4E-40 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 9.0E-89 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 PANTHER PTHR10457:SF6 7 384 4.1E-118 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS01430 d10fcac29ec84f7a3a2a2a11c90e1080 384 PANTHER PTHR10457 7 384 4.1E-118 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PGJ_RS09405 6457a19090f900c24cbe6864c1983bba 427 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PGJ_RS09405 6457a19090f900c24cbe6864c1983bba 427 SUPERFAMILY SSF52540 75 360 3.61E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09405 6457a19090f900c24cbe6864c1983bba 427 Pfam PF00271 Helicase conserved C-terminal domain 231 338 4.8E-29 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS09405 6457a19090f900c24cbe6864c1983bba 427 Gene3D G3DSA:3.40.50.300 2 213 8.3E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09405 6457a19090f900c24cbe6864c1983bba 427 PANTHER PTHR24031 1 376 1.5E-166 T 22-04-2016 PGJ_RS09405 6457a19090f900c24cbe6864c1983bba 427 SMART SM00490 258 339 1.0E-31 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS09405 6457a19090f900c24cbe6864c1983bba 427 Pfam PF00270 DEAD/DEAH box helicase 25 196 2.2E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PGJ_RS09405 6457a19090f900c24cbe6864c1983bba 427 SMART SM00487 20 222 1.3E-60 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PGJ_RS09405 6457a19090f900c24cbe6864c1983bba 427 Gene3D G3DSA:3.40.50.300 216 375 7.9E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01960 1a31dd0a804ed9f2a5a0ce33f54c1ca7 280 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 21 108 4.0E-29 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 PGJ_RS01960 1a31dd0a804ed9f2a5a0ce33f54c1ca7 280 SUPERFAMILY SSF54675 5 109 8.48E-30 T 22-04-2016 PGJ_RS01960 1a31dd0a804ed9f2a5a0ce33f54c1ca7 280 Gene3D G3DSA:3.20.20.70 131 266 2.1E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS01960 1a31dd0a804ed9f2a5a0ce33f54c1ca7 280 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 12 276 5.7E-110 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 PGJ_RS01960 1a31dd0a804ed9f2a5a0ce33f54c1ca7 280 PANTHER PTHR32179 6 277 1.4E-119 T 22-04-2016 PGJ_RS01960 1a31dd0a804ed9f2a5a0ce33f54c1ca7 280 SUPERFAMILY SSF51690 110 276 3.92E-59 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 PGJ_RS01960 1a31dd0a804ed9f2a5a0ce33f54c1ca7 280 Gene3D G3DSA:3.90.1170.20 3 130 5.4E-49 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 PGJ_RS01960 1a31dd0a804ed9f2a5a0ce33f54c1ca7 280 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 110 274 1.5E-60 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 PGJ_RS01960 1a31dd0a804ed9f2a5a0ce33f54c1ca7 280 PIRSF PIRSF006250 2 279 1.7E-91 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD PGJ_RS00560 10624119dc874497d0172dd1998ccad2 88 Pfam PF00216 Bacterial DNA-binding protein 1 86 4.5E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS00560 10624119dc874497d0172dd1998ccad2 88 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.4E-12 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS00560 10624119dc874497d0172dd1998ccad2 88 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.4E-12 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS00560 10624119dc874497d0172dd1998ccad2 88 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.4E-12 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS00560 10624119dc874497d0172dd1998ccad2 88 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PGJ_RS00560 10624119dc874497d0172dd1998ccad2 88 SUPERFAMILY SSF47729 1 86 2.21E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS00560 10624119dc874497d0172dd1998ccad2 88 PANTHER PTHR33175 1 85 2.3E-38 T 22-04-2016 PGJ_RS00560 10624119dc874497d0172dd1998ccad2 88 Gene3D G3DSA:4.10.520.10 1 86 1.8E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS00560 10624119dc874497d0172dd1998ccad2 88 SMART SM00411 1 88 3.5E-34 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS07030 423f0a091dbf814548c1ceb72e0f4ab5 174 Pfam PF00466 Ribosomal protein L10 1 100 7.7E-20 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 PGJ_RS07030 423f0a091dbf814548c1ceb72e0f4ab5 174 SUPERFAMILY SSF160369 1 174 7.06E-39 T 22-04-2016 PGJ_RS07030 423f0a091dbf814548c1ceb72e0f4ab5 174 PANTHER PTHR11560 1 174 2.9E-30 T 22-04-2016 PGJ_RS08200 373acb21214cee2a6a24f0928663553c 257 SUPERFAMILY SSF48452 89 169 6.56E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS08200 373acb21214cee2a6a24f0928663553c 257 Gene3D G3DSA:1.25.40.10 82 154 6.8E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS06815 6cd2eec3ae9b7e101011c2c708839b4a 468 Gene3D G3DSA:3.40.50.150 103 295 1.5E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS06815 6cd2eec3ae9b7e101011c2c708839b4a 468 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 405 454 3.4E-12 T 22-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS06815 6cd2eec3ae9b7e101011c2c708839b4a 468 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 278 295 9.9E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS06815 6cd2eec3ae9b7e101011c2c708839b4a 468 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 174 186 9.9E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS06815 6cd2eec3ae9b7e101011c2c708839b4a 468 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 108 118 9.9E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS06815 6cd2eec3ae9b7e101011c2c708839b4a 468 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 224 240 9.9E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS06815 6cd2eec3ae9b7e101011c2c708839b4a 468 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 77 91 9.9E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS06815 6cd2eec3ae9b7e101011c2c708839b4a 468 Pfam PF01189 16S rRNA methyltransferase RsmB/F 106 291 1.2E-35 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS06815 6cd2eec3ae9b7e101011c2c708839b4a 468 SUPERFAMILY SSF53335 4 295 1.72E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS06815 6cd2eec3ae9b7e101011c2c708839b4a 468 PANTHER PTHR22807:SF36 1 351 4.2E-94 T 22-04-2016 PGJ_RS06815 6cd2eec3ae9b7e101011c2c708839b4a 468 PANTHER PTHR22807 1 351 4.2E-94 T 22-04-2016 PGJ_RS06815 6cd2eec3ae9b7e101011c2c708839b4a 468 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 4 91 9.4E-25 T 22-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS04265 15368d4925f26b79881a596ec5b2bb6d 115 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 8.0E-23 T 22-04-2016 PGJ_RS04265 15368d4925f26b79881a596ec5b2bb6d 115 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 25.75 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PGJ_RS04265 15368d4925f26b79881a596ec5b2bb6d 115 PANTHER PTHR10986 2 115 2.4E-52 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PGJ_RS04265 15368d4925f26b79881a596ec5b2bb6d 115 SUPERFAMILY SSF74731 3 114 1.96E-42 T 22-04-2016 PGJ_RS04265 15368d4925f26b79881a596ec5b2bb6d 115 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PGJ_RS04265 15368d4925f26b79881a596ec5b2bb6d 115 Gene3D G3DSA:1.10.1900.20 55 115 8.6E-28 T 22-04-2016 PGJ_RS04265 15368d4925f26b79881a596ec5b2bb6d 115 PANTHER PTHR10986:SF12 2 115 2.4E-52 T 22-04-2016 PGJ_RS04265 15368d4925f26b79881a596ec5b2bb6d 115 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.5E-43 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PGJ_RS04265 15368d4925f26b79881a596ec5b2bb6d 115 Pfam PF00453 Ribosomal protein L20 3 109 3.4E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PGJ_RS04265 15368d4925f26b79881a596ec5b2bb6d 115 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.4E-32 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PGJ_RS04265 15368d4925f26b79881a596ec5b2bb6d 115 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.4E-32 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PGJ_RS04265 15368d4925f26b79881a596ec5b2bb6d 115 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.4E-32 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PGJ_RS01875 ba3bd4f5d14c5eba0f6ae4f80ea9adbb 218 SUPERFAMILY SSF51366 4 216 8.64E-70 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PGJ_RS01875 ba3bd4f5d14c5eba0f6ae4f80ea9adbb 218 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 214 2.4E-82 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PGJ_RS01875 ba3bd4f5d14c5eba0f6ae4f80ea9adbb 218 PANTHER PTHR11749 1 215 8.4E-106 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PGJ_RS01875 ba3bd4f5d14c5eba0f6ae4f80ea9adbb 218 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 32 46 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PGJ_RS01875 ba3bd4f5d14c5eba0f6ae4f80ea9adbb 218 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 201 2.5E-75 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PGJ_RS01875 ba3bd4f5d14c5eba0f6ae4f80ea9adbb 218 Gene3D G3DSA:3.20.20.70 2 215 5.8E-86 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS01875 ba3bd4f5d14c5eba0f6ae4f80ea9adbb 218 PIRSF PIRSF001461 1 218 7.7E-84 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PGJ_RS02540 4dd966ba865d24f83d8762d110941109 137 SUPERFAMILY SSF55961 10 133 4.58E-9 T 22-04-2016 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 PANTHER PTHR19370 246 412 7.3E-127 T 22-04-2016 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 PANTHER PTHR19370 61 176 7.3E-127 T 22-04-2016 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 PANTHER PTHR19370 205 230 7.3E-127 T 22-04-2016 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 SUPERFAMILY SSF63380 105 278 8.67E-34 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 PANTHER PTHR19370:SF32 246 412 7.3E-127 T 22-04-2016 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 PANTHER PTHR19370:SF32 61 176 7.3E-127 T 22-04-2016 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 PANTHER PTHR19370:SF32 205 230 7.3E-127 T 22-04-2016 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 5 412 2.0E-219 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 SUPERFAMILY SSF54292 38 124 1.85E-23 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 Gene3D G3DSA:2.40.30.10 124 270 7.5E-63 T 22-04-2016 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 PIRSF PIRSF000044 1 412 3.6E-189 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 39 115 2.1E-12 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 3 412 63.281 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 Gene3D G3DSA:3.40.50.80 283 398 4.1E-40 T 22-04-2016 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 Gene3D G3DSA:3.10.20.30 40 123 2.1E-22 T 22-04-2016 IPR012675 Beta-grasp domain PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 SUPERFAMILY SSF52343 263 409 6.55E-36 T 22-04-2016 PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 Pfam PF00970 Oxidoreductase FAD-binding domain 203 273 3.0E-7 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain PGJ_RS09790 f69fba2c0fbc421fd502f06d22b2c6bd 412 Pfam PF00175 Oxidoreductase NAD-binding domain 284 393 1.2E-16 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PGJ_RS01405 4db3837b97d8118a90fe7a39f1086614 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 413 5.5E-62 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS01405 4db3837b97d8118a90fe7a39f1086614 444 Pfam PF01554 MatE 19 178 1.4E-24 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS01405 4db3837b97d8118a90fe7a39f1086614 444 Pfam PF01554 MatE 250 395 1.6E-12 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS01405 4db3837b97d8118a90fe7a39f1086614 444 PANTHER PTHR11206:SF94 7 433 2.4E-103 T 22-04-2016 PGJ_RS01405 4db3837b97d8118a90fe7a39f1086614 444 PANTHER PTHR11206 7 433 2.4E-103 T 22-04-2016 PGJ_RS03440 54f97e5ce363dbb5796c0d48a8b4b41a 801 PANTHER PTHR33406 1 100 3.3E-42 T 22-04-2016 PGJ_RS03440 54f97e5ce363dbb5796c0d48a8b4b41a 801 PANTHER PTHR33406 118 774 3.3E-42 T 22-04-2016 PGJ_RS03440 54f97e5ce363dbb5796c0d48a8b4b41a 801 Pfam PF03176 MMPL family 569 770 9.0E-8 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 PGJ_RS03440 54f97e5ce363dbb5796c0d48a8b4b41a 801 Pfam PF03176 MMPL family 134 407 2.6E-26 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 PGJ_RS03440 54f97e5ce363dbb5796c0d48a8b4b41a 801 Gene3D G3DSA:1.20.1640.10 229 394 3.2E-30 T 22-04-2016 PGJ_RS03440 54f97e5ce363dbb5796c0d48a8b4b41a 801 Gene3D G3DSA:1.20.1640.10 576 774 2.4E-32 T 22-04-2016 PGJ_RS03440 54f97e5ce363dbb5796c0d48a8b4b41a 801 SUPERFAMILY SSF82866 565 774 9.16E-33 T 22-04-2016 PGJ_RS03440 54f97e5ce363dbb5796c0d48a8b4b41a 801 SUPERFAMILY SSF82866 209 390 1.31E-28 T 22-04-2016 PGJ_RS04210 b813e9b5006372491ed207269471e9c0 330 Pfam PF00881 Nitroreductase family 176 308 4.6E-7 T 22-04-2016 IPR029479 Nitroreductase PGJ_RS04210 b813e9b5006372491ed207269471e9c0 330 Gene3D G3DSA:3.40.109.10 231 322 1.0E-26 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PGJ_RS04210 b813e9b5006372491ed207269471e9c0 330 Gene3D G3DSA:3.40.109.10 9 70 1.0E-26 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PGJ_RS04210 b813e9b5006372491ed207269471e9c0 330 SUPERFAMILY SSF55469 229 319 2.88E-15 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PGJ_RS04210 b813e9b5006372491ed207269471e9c0 330 SUPERFAMILY SSF55469 12 82 7.85E-9 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PGJ_RS00665 cebfc101fe49679b570c92b1d85fd7d7 341 SUPERFAMILY SSF55909 4 337 2.86E-112 T 22-04-2016 PGJ_RS00665 cebfc101fe49679b570c92b1d85fd7d7 341 PANTHER PTHR31377:SF0 8 341 2.7E-109 T 22-04-2016 PGJ_RS00665 cebfc101fe49679b570c92b1d85fd7d7 341 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 7 336 3.1E-111 T 22-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PGJ_RS00665 cebfc101fe49679b570c92b1d85fd7d7 341 Gene3D G3DSA:3.75.10.10 4 338 7.8E-117 T 22-04-2016 PGJ_RS00665 cebfc101fe49679b570c92b1d85fd7d7 341 PANTHER PTHR31377 8 341 2.7E-109 T 22-04-2016 PGJ_RS08955 419853f272508b2af84f65a778a9d1e1 204 Pfam PF08241 Methyltransferase domain 52 150 9.2E-18 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PGJ_RS08955 419853f272508b2af84f65a778a9d1e1 204 PANTHER PTHR10108 43 191 4.2E-20 T 22-04-2016 PGJ_RS08955 419853f272508b2af84f65a778a9d1e1 204 PANTHER PTHR10108:SF779 43 191 4.2E-20 T 22-04-2016 PGJ_RS08955 419853f272508b2af84f65a778a9d1e1 204 Gene3D G3DSA:3.40.50.150 41 191 5.1E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS08955 419853f272508b2af84f65a778a9d1e1 204 SUPERFAMILY SSF53335 11 196 1.03E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 Gene3D G3DSA:1.10.1670.10 142 242 2.7E-36 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 PANTHER PTHR10359 25 350 2.8E-81 T 22-04-2016 PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 ProSitePatterns PS01155 Endonuclease III family signature. 121 150 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 SUPERFAMILY SSF55811 239 376 1.26E-10 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 Pfam PF00633 Helix-hairpin-helix motif 120 147 1.2E-6 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 Gene3D G3DSA:1.10.340.30 40 141 2.3E-41 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 Gene3D G3DSA:3.90.79.10 268 376 1.0E-10 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 PANTHER PTHR10359:SF1 25 350 2.8E-81 T 22-04-2016 PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 26 291 7.2E-91 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 54 172 4.9E-15 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 Pfam PF14815 NUDIX domain 267 374 2.8E-14 T 22-04-2016 IPR029119 MutY, C-terminal PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 SMART SM00478 58 209 7.6E-40 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PGJ_RS02425 335d4e4ac1c648f9b3f654ad1d9da087 381 SUPERFAMILY SSF48150 25 241 1.21E-72 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PGJ_RS07535 2fae97c397d5568e52b2ce0e018e13d6 145 Gene3D G3DSA:3.40.1400.10 3 141 1.8E-59 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 PGJ_RS07535 2fae97c397d5568e52b2ce0e018e13d6 145 Pfam PF02502 Ribose/Galactose Isomerase 4 141 1.9E-54 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 PGJ_RS07535 2fae97c397d5568e52b2ce0e018e13d6 145 PIRSF PIRSF005384 2 144 4.3E-53 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 PGJ_RS07535 2fae97c397d5568e52b2ce0e018e13d6 145 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 4 141 5.7E-46 T 22-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 PGJ_RS07535 2fae97c397d5568e52b2ce0e018e13d6 145 PANTHER PTHR30345 3 141 2.3E-61 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 PGJ_RS07535 2fae97c397d5568e52b2ce0e018e13d6 145 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 141 1.7E-49 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 PGJ_RS07535 2fae97c397d5568e52b2ce0e018e13d6 145 SUPERFAMILY SSF89623 3 141 1.24E-52 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 PGJ_RS03515 6f80de292f96d6baa27f1fd648c20491 129 Gene3D G3DSA:3.10.129.10 6 124 6.7E-16 T 22-04-2016 IPR029069 HotDog domain PGJ_RS03515 6f80de292f96d6baa27f1fd648c20491 129 SUPERFAMILY SSF54637 6 122 6.71E-18 T 22-04-2016 IPR029069 HotDog domain PGJ_RS03515 6f80de292f96d6baa27f1fd648c20491 129 Pfam PF03061 Thioesterase superfamily 25 89 9.3E-7 T 22-04-2016 IPR006683 Thioesterase domain PGJ_RS09655 0d8d2fa346461431cc1c82990c87db22 501 Gene3D G3DSA:3.40.50.2300 159 294 5.0E-8 T 22-04-2016 PGJ_RS09655 0d8d2fa346461431cc1c82990c87db22 501 SMART SM00257 36 79 8.0E-6 T 22-04-2016 IPR018392 LysM domain PGJ_RS09655 0d8d2fa346461431cc1c82990c87db22 501 SMART SM00257 97 141 5.4E-10 T 22-04-2016 IPR018392 LysM domain PGJ_RS09655 0d8d2fa346461431cc1c82990c87db22 501 Pfam PF01476 LysM domain 37 79 1.9E-6 T 22-04-2016 IPR018392 LysM domain PGJ_RS09655 0d8d2fa346461431cc1c82990c87db22 501 Pfam PF01476 LysM domain 98 141 2.8E-9 T 22-04-2016 IPR018392 LysM domain PGJ_RS09655 0d8d2fa346461431cc1c82990c87db22 501 PANTHER PTHR21666 37 390 1.0E-27 T 22-04-2016 PGJ_RS09655 0d8d2fa346461431cc1c82990c87db22 501 Gene3D G3DSA:3.10.350.10 98 142 3.1E-11 T 22-04-2016 IPR018392 LysM domain PGJ_RS09655 0d8d2fa346461431cc1c82990c87db22 501 Gene3D G3DSA:3.10.350.10 36 80 1.8E-11 T 22-04-2016 IPR018392 LysM domain PGJ_RS09655 0d8d2fa346461431cc1c82990c87db22 501 PANTHER PTHR21666:SF219 37 390 1.0E-27 T 22-04-2016 PGJ_RS09655 0d8d2fa346461431cc1c82990c87db22 501 SUPERFAMILY SSF53822 155 486 6.39E-20 T 22-04-2016 IPR028082 Periplasmic binding protein-like I PGJ_RS09655 0d8d2fa346461431cc1c82990c87db22 501 SUPERFAMILY SSF54106 97 141 2.09E-7 T 22-04-2016 IPR018392 LysM domain PGJ_RS09655 0d8d2fa346461431cc1c82990c87db22 501 SUPERFAMILY SSF54106 35 79 3.14E-8 T 22-04-2016 IPR018392 LysM domain PGJ_RS05150 9d3ea4f57ee1158906cd06b6e0f644dc 160 TIGRFAM TIGR01201 HU_rel: putative DNA-binding protein 2 160 3.5E-20 T 22-04-2016 IPR005902 Putative DNA-binding protein, HU-related PGJ_RS05150 9d3ea4f57ee1158906cd06b6e0f644dc 160 Gene3D G3DSA:4.10.520.10 32 89 7.8E-4 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS05150 9d3ea4f57ee1158906cd06b6e0f644dc 160 SUPERFAMILY SSF47729 32 101 8.1E-7 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS02995 dca927d59b24e33c6e26e344319cc0da 353 Gene3D G3DSA:3.40.50.1970 20 159 1.4E-46 T 22-04-2016 PGJ_RS02995 dca927d59b24e33c6e26e344319cc0da 353 PIRSF PIRSF001455 7 349 1.9E-84 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PGJ_RS02995 dca927d59b24e33c6e26e344319cc0da 353 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 2 344 1.4E-111 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PGJ_RS02995 dca927d59b24e33c6e26e344319cc0da 353 Gene3D G3DSA:1.20.1090.10 160 345 8.6E-37 T 22-04-2016 PGJ_RS02995 dca927d59b24e33c6e26e344319cc0da 353 SUPERFAMILY SSF56796 5 344 4.06E-76 T 22-04-2016 PGJ_RS02995 dca927d59b24e33c6e26e344319cc0da 353 PANTHER PTHR21090 2 349 2.5E-85 T 22-04-2016 PGJ_RS02995 dca927d59b24e33c6e26e344319cc0da 353 Pfam PF01761 3-dehydroquinate synthase 55 313 9.8E-80 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 Gene3D G3DSA:3.90.226.10 503 523 2.2E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 Gene3D G3DSA:3.90.226.10 395 407 2.2E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 Gene3D G3DSA:3.90.226.10 172 345 2.2E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 SUPERFAMILY SSF50156 64 178 6.45E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 SMART SM00245 163 347 3.0E-48 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 PANTHER PTHR32060 45 427 4.1E-128 T 22-04-2016 PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 SMART SM00228 90 163 7.7E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 Gene3D G3DSA:2.30.42.10 91 171 4.2E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 46 347 5.1E-81 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 Pfam PF03572 Peptidase family S41 189 348 7.9E-52 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 Pfam PF13180 PDZ domain 91 171 1.4E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 PANTHER PTHR32060:SF9 45 427 4.1E-128 T 22-04-2016 PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 SUPERFAMILY SSF52096 35 108 8.62E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS01075 cbcccafabd79176f07089b196d77c300 533 SUPERFAMILY SSF52096 183 346 8.62E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS05480 8d27044aa8b4a42cd06f9a633cbd23d6 444 Gene3D G3DSA:1.20.1600.10 24 431 4.9E-68 T 22-04-2016 PGJ_RS05480 8d27044aa8b4a42cd06f9a633cbd23d6 444 SUPERFAMILY SSF56954 5 431 4.58E-74 T 22-04-2016 PGJ_RS05480 8d27044aa8b4a42cd06f9a633cbd23d6 444 PANTHER PTHR30026 1 431 2.6E-47 T 22-04-2016 PGJ_RS05480 8d27044aa8b4a42cd06f9a633cbd23d6 444 Pfam PF02321 Outer membrane efflux protein 29 217 3.9E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS05480 8d27044aa8b4a42cd06f9a633cbd23d6 444 Pfam PF02321 Outer membrane efflux protein 251 429 1.6E-29 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS00260 1e5ba6075d7605b944fe1109da631b88 512 Pfam PF02638 Glycosyl hydrolase-like 10 43 352 2.5E-69 T 22-04-2016 IPR003790 Glycosyl hydrolase-like 10 PGJ_RS00260 1e5ba6075d7605b944fe1109da631b88 512 PANTHER PTHR30032 236 422 6.7E-76 T 22-04-2016 PGJ_RS00260 1e5ba6075d7605b944fe1109da631b88 512 PANTHER PTHR30032 63 212 6.7E-76 T 22-04-2016 PGJ_RS00260 1e5ba6075d7605b944fe1109da631b88 512 SUPERFAMILY SSF51445 69 331 1.75E-22 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS00260 1e5ba6075d7605b944fe1109da631b88 512 PANTHER PTHR30032:SF2 236 422 6.7E-76 T 22-04-2016 PGJ_RS00260 1e5ba6075d7605b944fe1109da631b88 512 PANTHER PTHR30032:SF2 63 212 6.7E-76 T 22-04-2016 PGJ_RS02530 04668b5e46ee3b86186d5bedd54f6cae 273 PANTHER PTHR23088 10 271 4.2E-82 T 22-04-2016 PGJ_RS02530 04668b5e46ee3b86186d5bedd54f6cae 273 SUPERFAMILY SSF56317 4 261 3.4E-63 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PGJ_RS02530 04668b5e46ee3b86186d5bedd54f6cae 273 PANTHER PTHR23088:SF28 10 271 4.2E-82 T 22-04-2016 PGJ_RS02530 04668b5e46ee3b86186d5bedd54f6cae 273 Gene3D G3DSA:3.60.110.10 4 264 1.7E-64 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PGJ_RS02530 04668b5e46ee3b86186d5bedd54f6cae 273 Pfam PF00795 Carbon-nitrogen hydrolase 11 251 2.4E-39 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PGJ_RS02730 4a1d9932f58e85d6e4a270caa9d02085 281 Pfam PF13739 Domain of unknown function (DUF4163) 65 165 3.5E-6 T 22-04-2016 IPR025303 Domain of unknown function DUF4163 PGJ_RS02730 4a1d9932f58e85d6e4a270caa9d02085 281 Gene3D G3DSA:3.30.565.40 57 182 4.2E-11 T 22-04-2016 IPR025303 Domain of unknown function DUF4163 PGJ_RS02730 4a1d9932f58e85d6e4a270caa9d02085 281 Pfam PF11738 Protein of unknown function (DUF3298) 186 263 1.0E-10 T 22-04-2016 IPR021729 Domain of unknown function DUF3298 PGJ_RS02730 4a1d9932f58e85d6e4a270caa9d02085 281 Gene3D G3DSA:3.90.640.20 186 275 2.2E-14 T 22-04-2016 IPR021729 Domain of unknown function DUF3298 PGJ_RS05585 a211de2fda028166d20bbe789baa2dd4 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 2.4E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PGJ_RS05585 a211de2fda028166d20bbe789baa2dd4 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 2.4E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PGJ_RS05585 a211de2fda028166d20bbe789baa2dd4 202 SUPERFAMILY SSF46689 4 67 1.49E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS05585 a211de2fda028166d20bbe789baa2dd4 202 PANTHER PTHR30055 6 196 1.8E-15 T 22-04-2016 PGJ_RS05585 a211de2fda028166d20bbe789baa2dd4 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 1.7E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PGJ_RS05585 a211de2fda028166d20bbe789baa2dd4 202 Gene3D G3DSA:1.10.357.10 3 196 5.4E-29 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PGJ_RS04065 09019561d4839502ccf3a0212cd14d7f 548 SUPERFAMILY SSF53756 20 331 6.8E-17 T 22-04-2016 PGJ_RS04065 09019561d4839502ccf3a0212cd14d7f 548 Gene3D G3DSA:3.40.50.2000 427 504 3.8E-8 T 22-04-2016 PGJ_RS04065 09019561d4839502ccf3a0212cd14d7f 548 PANTHER PTHR10176 10 505 5.9E-87 T 22-04-2016 IPR008631 Glycogen synthase GO:0004373|GO:0005978 KEGG: 00500+2.4.1.11|MetaCyc: PWY-5067|Reactome: REACT_474|UniPathway: UPA00164 PGJ_RS04065 09019561d4839502ccf3a0212cd14d7f 548 PANTHER PTHR10176:SF3 10 505 5.9E-87 T 22-04-2016 PGJ_RS04065 09019561d4839502ccf3a0212cd14d7f 548 Pfam PF05693 Glycogen synthase 376 544 7.8E-25 T 22-04-2016 IPR008631 Glycogen synthase GO:0004373|GO:0005978 KEGG: 00500+2.4.1.11|MetaCyc: PWY-5067|Reactome: REACT_474|UniPathway: UPA00164 PGJ_RS04065 09019561d4839502ccf3a0212cd14d7f 548 Pfam PF05693 Glycogen synthase 13 347 1.4E-45 T 22-04-2016 IPR008631 Glycogen synthase GO:0004373|GO:0005978 KEGG: 00500+2.4.1.11|MetaCyc: PWY-5067|Reactome: REACT_474|UniPathway: UPA00164 PGJ_RS04065 09019561d4839502ccf3a0212cd14d7f 548 SUPERFAMILY SSF53756 424 545 2.51E-16 T 22-04-2016 PGJ_RS04515 93cde19f2458a5547b3fb472b40b59a7 518 Pfam PF00072 Response regulator receiver domain 10 118 3.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS04515 93cde19f2458a5547b3fb472b40b59a7 518 SMART SM00448 8 119 4.6E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS04515 93cde19f2458a5547b3fb472b40b59a7 518 Gene3D G3DSA:3.40.50.2300 4 131 4.1E-30 T 22-04-2016 PGJ_RS04515 93cde19f2458a5547b3fb472b40b59a7 518 SUPERFAMILY SSF53649 231 517 5.23E-9 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PGJ_RS04515 93cde19f2458a5547b3fb472b40b59a7 518 PANTHER PTHR26402 373 384 2.9E-24 T 22-04-2016 PGJ_RS04515 93cde19f2458a5547b3fb472b40b59a7 518 PANTHER PTHR26402 8 138 2.9E-24 T 22-04-2016 PGJ_RS04515 93cde19f2458a5547b3fb472b40b59a7 518 Pfam PF08665 PglZ domain 231 425 2.1E-58 T 22-04-2016 IPR013973 PglZ domain PGJ_RS04515 93cde19f2458a5547b3fb472b40b59a7 518 SUPERFAMILY SSF52172 5 141 3.7E-32 T 22-04-2016 IPR011006 CheY-like superfamily PGJ_RS02220 fa1a9c8c31885f3c78cfc1445850627e 843 Pfam PF01640 Peptidase C10 family 171 363 1.8E-56 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02220 fa1a9c8c31885f3c78cfc1445850627e 843 SUPERFAMILY SSF54001 23 394 1.47E-102 T 22-04-2016 PGJ_RS02220 fa1a9c8c31885f3c78cfc1445850627e 843 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 774 834 1.0E-8 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS02220 fa1a9c8c31885f3c78cfc1445850627e 843 ProDom PD004169 PRECURSOR CYSTEINE STREPTOCOCCAL STREPTOPAIN PROTEINASE PROTEASE THIOL B STREPTOCOCCUS EXOTOXIN 142 394 1.0E-150 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02220 fa1a9c8c31885f3c78cfc1445850627e 843 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 256 272 3.3E-38 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02220 fa1a9c8c31885f3c78cfc1445850627e 843 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 317 341 3.3E-38 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02220 fa1a9c8c31885f3c78cfc1445850627e 843 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 187 211 3.3E-38 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02220 fa1a9c8c31885f3c78cfc1445850627e 843 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 371 392 3.3E-38 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02220 fa1a9c8c31885f3c78cfc1445850627e 843 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 284 303 3.3E-38 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02220 fa1a9c8c31885f3c78cfc1445850627e 843 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 349 370 3.3E-38 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02220 fa1a9c8c31885f3c78cfc1445850627e 843 Pfam PF13734 Spi protease inhibitor 22 131 1.7E-23 T 22-04-2016 IPR025896 Spi protease inhibitor PGJ_RS04165 3ceb53ffd5a3ef52db8a03495dbb3998 498 SUPERFAMILY SSF100950 4 217 1.87E-61 T 22-04-2016 PGJ_RS04165 3ceb53ffd5a3ef52db8a03495dbb3998 498 SUPERFAMILY SSF100950 221 489 1.47E-77 T 22-04-2016 PGJ_RS04165 3ceb53ffd5a3ef52db8a03495dbb3998 498 PANTHER PTHR21432:SF10 4 497 2.9E-237 T 22-04-2016 PGJ_RS04165 3ceb53ffd5a3ef52db8a03495dbb3998 498 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 6 210 5.3E-36 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PGJ_RS04165 3ceb53ffd5a3ef52db8a03495dbb3998 498 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 315 459 6.9E-41 T 22-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PGJ_RS04165 3ceb53ffd5a3ef52db8a03495dbb3998 498 PANTHER PTHR21432 4 497 2.9E-237 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PGJ_RS04165 3ceb53ffd5a3ef52db8a03495dbb3998 498 Gene3D G3DSA:3.40.810.20 223 484 2.6E-70 T 22-04-2016 PGJ_RS04165 3ceb53ffd5a3ef52db8a03495dbb3998 498 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 3 488 1.2E-232 T 22-04-2016 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 PGJ_RS04165 3ceb53ffd5a3ef52db8a03495dbb3998 498 Gene3D G3DSA:3.40.1080.10 4 215 6.3E-47 T 22-04-2016 PGJ_RS09550 9aeab41467ca48bd86bbd0cac0bb773b 262 SUPERFAMILY SSF53098 57 224 3.19E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS09550 9aeab41467ca48bd86bbd0cac0bb773b 262 Pfam PF00665 Integrase core domain 62 181 3.4E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS09550 9aeab41467ca48bd86bbd0cac0bb773b 262 PANTHER PTHR32552:SF23 14 221 2.2E-40 T 22-04-2016 PGJ_RS09550 9aeab41467ca48bd86bbd0cac0bb773b 262 PANTHER PTHR32552 14 221 2.2E-40 T 22-04-2016 PGJ_RS09550 9aeab41467ca48bd86bbd0cac0bb773b 262 Gene3D G3DSA:3.30.420.10 57 219 6.3E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS01765 9aeab41467ca48bd86bbd0cac0bb773b 262 SUPERFAMILY SSF53098 57 224 3.19E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS01765 9aeab41467ca48bd86bbd0cac0bb773b 262 Pfam PF00665 Integrase core domain 62 181 3.4E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS01765 9aeab41467ca48bd86bbd0cac0bb773b 262 PANTHER PTHR32552:SF23 14 221 2.2E-40 T 22-04-2016 PGJ_RS01765 9aeab41467ca48bd86bbd0cac0bb773b 262 PANTHER PTHR32552 14 221 2.2E-40 T 22-04-2016 PGJ_RS01765 9aeab41467ca48bd86bbd0cac0bb773b 262 Gene3D G3DSA:3.30.420.10 57 219 6.3E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS08420 9aeab41467ca48bd86bbd0cac0bb773b 262 SUPERFAMILY SSF53098 57 224 3.19E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS08420 9aeab41467ca48bd86bbd0cac0bb773b 262 Pfam PF00665 Integrase core domain 62 181 3.4E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS08420 9aeab41467ca48bd86bbd0cac0bb773b 262 PANTHER PTHR32552:SF23 14 221 2.2E-40 T 22-04-2016 PGJ_RS08420 9aeab41467ca48bd86bbd0cac0bb773b 262 PANTHER PTHR32552 14 221 2.2E-40 T 22-04-2016 PGJ_RS08420 9aeab41467ca48bd86bbd0cac0bb773b 262 Gene3D G3DSA:3.30.420.10 57 219 6.3E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS05520 643248a7707fd678bb8b508f31ad67c7 379 PANTHER PTHR30535:SF11 92 375 3.0E-43 T 22-04-2016 PGJ_RS05520 643248a7707fd678bb8b508f31ad67c7 379 Pfam PF01497 Periplasmic binding protein 99 336 1.3E-14 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 PGJ_RS05520 643248a7707fd678bb8b508f31ad67c7 379 SUPERFAMILY SSF53807 88 357 1.53E-37 T 22-04-2016 PGJ_RS05520 643248a7707fd678bb8b508f31ad67c7 379 Gene3D G3DSA:3.40.50.1980 214 372 1.4E-4 T 22-04-2016 PGJ_RS05520 643248a7707fd678bb8b508f31ad67c7 379 PANTHER PTHR30535 92 375 3.0E-43 T 22-04-2016 PGJ_RS05520 643248a7707fd678bb8b508f31ad67c7 379 Gene3D G3DSA:3.40.50.1980 88 210 5.7E-11 T 22-04-2016 PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 SMART SM01240 8 490 8.1E-173 T 22-04-2016 PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 PANTHER PTHR11911:SF85 11 297 1.2E-195 T 22-04-2016 PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 PANTHER PTHR11911:SF85 315 494 1.2E-195 T 22-04-2016 PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 PIRSF PIRSF000130 18 497 2.9E-135 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 PANTHER PTHR11911 11 297 1.2E-195 T 22-04-2016 PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 PANTHER PTHR11911 315 494 1.2E-195 T 22-04-2016 PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 SUPERFAMILY SSF54631 110 214 1.3E-18 T 22-04-2016 PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 SUPERFAMILY SSF51412 6 100 5.36E-101 T 22-04-2016 PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 SUPERFAMILY SSF51412 232 494 5.36E-101 T 22-04-2016 PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 310 322 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 Pfam PF00571 CBS domain 110 151 0.0048 T 22-04-2016 IPR000644 CBS domain PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 11 490 8.4E-109 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 PGJ_RS06390 4ea4eaf8e427ef9467f4546747add6e6 498 Gene3D G3DSA:3.20.20.70 5 496 5.5E-130 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS02875 6846dbf71397cb79ab600ca4dd51bdf1 409 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 229 266 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PGJ_RS02875 6846dbf71397cb79ab600ca4dd51bdf1 409 Gene3D G3DSA:3.40.640.10 62 312 4.5E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS02875 6846dbf71397cb79ab600ca4dd51bdf1 409 Gene3D G3DSA:3.90.1150.10 8 61 2.8E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS02875 6846dbf71397cb79ab600ca4dd51bdf1 409 Gene3D G3DSA:3.90.1150.10 314 406 2.8E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS02875 6846dbf71397cb79ab600ca4dd51bdf1 409 SUPERFAMILY SSF53383 8 406 1.0E-123 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS02875 6846dbf71397cb79ab600ca4dd51bdf1 409 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 8 406 1.2E-210 T 22-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 PGJ_RS02875 6846dbf71397cb79ab600ca4dd51bdf1 409 Pfam PF00202 Aminotransferase class-III 18 404 4.5E-117 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PGJ_RS02875 6846dbf71397cb79ab600ca4dd51bdf1 409 PANTHER PTHR11986:SF18 4 409 3.7E-260 T 22-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 PGJ_RS02875 6846dbf71397cb79ab600ca4dd51bdf1 409 PANTHER PTHR11986 4 409 3.7E-260 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PGJ_RS06265 b6a316f636866c2e503946313962d251 95 PANTHER PTHR34585 3 95 4.4E-26 T 22-04-2016 PGJ_RS06265 b6a316f636866c2e503946313962d251 95 Gene3D G3DSA:1.10.10.10 43 91 7.6E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06265 b6a316f636866c2e503946313962d251 95 Pfam PF12728 Helix-turn-helix domain 43 92 2.8E-8 T 22-04-2016 PGJ_RS06265 b6a316f636866c2e503946313962d251 95 SUPERFAMILY SSF46955 43 94 1.77E-10 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS06810 413237e1c05fb269c27a378dbe411627 237 PANTHER PTHR21091 65 190 2.0E-27 T 22-04-2016 PGJ_RS06810 413237e1c05fb269c27a378dbe411627 237 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 70 218 3.9E-8 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PGJ_RS06810 413237e1c05fb269c27a378dbe411627 237 SUPERFAMILY SSF53790 6 236 3.27E-66 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PGJ_RS06810 413237e1c05fb269c27a378dbe411627 237 Gene3D G3DSA:3.30.950.10 123 236 1.3E-23 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PGJ_RS06810 413237e1c05fb269c27a378dbe411627 237 PANTHER PTHR21091:SF118 65 190 2.0E-27 T 22-04-2016 PGJ_RS06810 413237e1c05fb269c27a378dbe411627 237 PIRSF PIRSF005917 1 235 3.5E-48 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS03735 ccdde492279c54b8a6c06b84f6dfa510 186 SUPERFAMILY SSF52218 28 154 1.97E-22 T 22-04-2016 IPR029039 Flavoprotein-like domain PGJ_RS03735 ccdde492279c54b8a6c06b84f6dfa510 186 ProSitePatterns PS00201 Flavodoxin signature. 32 48 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 PGJ_RS03735 ccdde492279c54b8a6c06b84f6dfa510 186 PANTHER PTHR39201 5 186 2.2E-45 T 22-04-2016 PGJ_RS03735 ccdde492279c54b8a6c06b84f6dfa510 186 Pfam PF12682 Flavodoxin 29 176 9.6E-26 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PGJ_RS03735 ccdde492279c54b8a6c06b84f6dfa510 186 PANTHER PTHR39201:SF1 5 186 2.2E-45 T 22-04-2016 PGJ_RS03735 ccdde492279c54b8a6c06b84f6dfa510 186 Gene3D G3DSA:3.40.50.360 28 177 6.1E-21 T 22-04-2016 IPR029039 Flavoprotein-like domain PGJ_RS06455 b7665c1f192167b3e966ec6d524c498d 151 SUPERFAMILY SSF55486 4 138 4.15E-33 T 22-04-2016 PGJ_RS06455 b7665c1f192167b3e966ec6d524c498d 151 Pfam PF02130 Uncharacterized protein family UPF0054 20 135 2.9E-23 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PGJ_RS06455 b7665c1f192167b3e966ec6d524c498d 151 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 38 138 1.7E-30 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PGJ_RS06455 b7665c1f192167b3e966ec6d524c498d 151 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 146 17.619 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PGJ_RS06455 b7665c1f192167b3e966ec6d524c498d 151 Gene3D G3DSA:3.40.390.30 15 138 6.5E-31 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 PGJ_RS01330 815c90c40a8b5de9312c138bb923a61e 84 SUPERFAMILY SSF46992 3 83 3.53E-21 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS01330 815c90c40a8b5de9312c138bb923a61e 84 Gene3D G3DSA:1.20.58.110 1 83 1.7E-22 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS01330 815c90c40a8b5de9312c138bb923a61e 84 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 82 14.64 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS01330 815c90c40a8b5de9312c138bb923a61e 84 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 83 1.5E-17 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS01330 815c90c40a8b5de9312c138bb923a61e 84 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 83 8.0E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS01330 815c90c40a8b5de9312c138bb923a61e 84 Pfam PF01649 Ribosomal protein S20 2 81 6.4E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS01330 815c90c40a8b5de9312c138bb923a61e 84 PANTHER PTHR33398 1 84 1.0E-20 T 22-04-2016 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 SUPERFAMILY SSF49464 23 104 1.07E-16 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 223 2.0E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 199 229 1.2E-17 T 22-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 SUPERFAMILY SSF56935 333 422 3.37E-87 T 22-04-2016 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 SUPERFAMILY SSF56935 102 248 3.37E-87 T 22-04-2016 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 SUPERFAMILY SSF56935 946 1032 3.37E-87 T 22-04-2016 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 SUPERFAMILY SSF56935 463 802 3.37E-87 T 22-04-2016 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 SUPERFAMILY SSF56935 868 910 3.37E-87 T 22-04-2016 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 23 1032 9.2E-222 T 22-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 Pfam PF00593 TonB dependent receptor 643 1030 2.5E-19 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 Gene3D G3DSA:2.170.130.10 103 222 3.0E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 Gene3D G3DSA:2.60.40.1120 24 86 1.5E-10 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 Gene3D G3DSA:2.40.170.20 875 1032 1.1E-50 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 Gene3D G3DSA:2.40.170.20 223 248 1.1E-50 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 Gene3D G3DSA:2.40.170.20 460 814 1.1E-50 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 Gene3D G3DSA:2.40.170.20 342 427 1.1E-50 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 PANTHER PTHR11532 1 388 3.4E-201 T 22-04-2016 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 PANTHER PTHR11532 536 1030 3.4E-201 T 22-04-2016 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 PANTHER PTHR11532 468 516 3.4E-201 T 22-04-2016 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 Pfam PF13715 CarboxypepD_reg-like domain 25 106 1.1E-15 T 22-04-2016 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 PANTHER PTHR11532:SF57 1 388 3.4E-201 T 22-04-2016 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 PANTHER PTHR11532:SF57 536 1030 3.4E-201 T 22-04-2016 PGJ_RS00855 6ed100713ae38a66a02f95f0ecb89b1a 1032 PANTHER PTHR11532:SF57 468 516 3.4E-201 T 22-04-2016 PGJ_RS04435 23b17b6ddd1ec186e0e4949add90933f 335 Pfam PF06144 DNA polymerase III, delta subunit 20 185 3.0E-20 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 PGJ_RS04435 23b17b6ddd1ec186e0e4949add90933f 335 Gene3D G3DSA:3.40.50.300 11 129 2.5E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04435 23b17b6ddd1ec186e0e4949add90933f 335 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 312 2.6E-40 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 PGJ_RS04435 23b17b6ddd1ec186e0e4949add90933f 335 Gene3D G3DSA:1.10.8.60 141 227 1.2E-13 T 22-04-2016 PGJ_RS04435 23b17b6ddd1ec186e0e4949add90933f 335 PANTHER PTHR34388 1 312 7.2E-46 T 22-04-2016 PGJ_RS04435 23b17b6ddd1ec186e0e4949add90933f 335 SUPERFAMILY SSF52540 16 203 1.22E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00310 66f8a8861deb5594ef0b489d34d24fc7 276 Gene3D G3DSA:3.20.20.70 4 259 2.2E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS00310 66f8a8861deb5594ef0b489d34d24fc7 276 PANTHER PTHR19278:SF1 5 226 1.2E-69 T 22-04-2016 PGJ_RS00310 66f8a8861deb5594ef0b489d34d24fc7 276 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 250 4.1E-31 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS00310 66f8a8861deb5594ef0b489d34d24fc7 276 PANTHER PTHR19278 5 226 1.2E-69 T 22-04-2016 PGJ_RS00310 66f8a8861deb5594ef0b489d34d24fc7 276 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 1 268 31.726 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS00310 66f8a8861deb5594ef0b489d34d24fc7 276 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 5 255 7.7E-72 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS00310 66f8a8861deb5594ef0b489d34d24fc7 276 SMART SM00934 16 255 1.0E-52 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PGJ_RS00310 66f8a8861deb5594ef0b489d34d24fc7 276 SUPERFAMILY SSF51366 2 260 4.32E-78 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PGJ_RS05205 2e6c99b723cc23e466826c56c8555d5e 254 PANTHER PTHR12029 5 252 5.2E-49 T 22-04-2016 PGJ_RS05205 2e6c99b723cc23e466826c56c8555d5e 254 Gene3D G3DSA:3.30.1330.30 1 91 1.0E-20 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like PGJ_RS05205 2e6c99b723cc23e466826c56c8555d5e 254 Gene3D G3DSA:3.40.1280.10 100 253 1.4E-43 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PGJ_RS05205 2e6c99b723cc23e466826c56c8555d5e 254 SUPERFAMILY SSF75217 99 253 1.05E-35 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PGJ_RS05205 2e6c99b723cc23e466826c56c8555d5e 254 SUPERFAMILY SSF55315 6 91 7.3E-10 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like PGJ_RS05205 2e6c99b723cc23e466826c56c8555d5e 254 Pfam PF00588 SpoU rRNA Methylase family 101 247 1.5E-31 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 SUPERFAMILY SSF81886 948 1031 3.27E-63 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 SUPERFAMILY SSF81886 1089 1101 3.27E-63 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 SUPERFAMILY SSF81886 773 901 3.27E-63 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Gene3D G3DSA:3.90.1440.10 404 449 2.1E-39 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Gene3D G3DSA:3.90.1440.10 482 549 2.1E-39 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 82 698 2.1E-195 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 SUPERFAMILY SSF52540 550 597 1.31E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 SUPERFAMILY SSF52540 140 317 1.31E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 SUPERFAMILY SSF52540 6 58 1.31E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 SMART SM00957 7 584 2.8E-242 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Pfam PF07516 SecA Wing and Scaffold domain 771 1020 2.0E-56 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Pfam PF01043 SecA preprotein cross-linking domain 399 540 1.6E-35 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Gene3D G3DSA:1.10.3060.10 942 1022 2.6E-45 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Gene3D G3DSA:1.10.3060.10 801 899 2.6E-45 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 PRINTS PR00906 SecA protein signature 595 608 8.8E-32 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 PRINTS PR00906 SecA protein signature 521 543 8.8E-32 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 PRINTS PR00906 SecA protein signature 558 575 8.8E-32 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 PRINTS PR00906 SecA protein signature 106 130 8.8E-32 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Hamap MF_01382 Protein translocase subunit SecA [secA]. 6 1023 19.704 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Gene3D G3DSA:3.40.50.300 599 771 1.0E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Pfam PF02810 SEC-C motif 1093 1111 1.6E-10 T 22-04-2016 IPR004027 SEC-C motif PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 PANTHER PTHR30612 108 122 0.0 T 22-04-2016 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 PANTHER PTHR30612 75 82 0.0 T 22-04-2016 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 PANTHER PTHR30612 467 1113 0.0 T 22-04-2016 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 PANTHER PTHR30612 1 57 0.0 T 22-04-2016 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 PANTHER PTHR30612 168 362 0.0 T 22-04-2016 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 SUPERFAMILY SSF52540 599 770 1.58E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 ProSitePatterns PS01312 SecA family signature. 682 697 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 SUPERFAMILY SSF81767 484 548 4.71E-31 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 SUPERFAMILY SSF81767 409 451 4.71E-31 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Pfam PF07517 SecA DEAD-like domain 7 584 1.2E-122 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Gene3D G3DSA:3.40.50.300 551 598 5.7E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Gene3D G3DSA:3.40.50.300 3 63 5.7E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Gene3D G3DSA:3.40.50.300 103 121 5.7E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 Gene3D G3DSA:3.40.50.300 167 317 5.7E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06435 763b07a2522d940d86b87c71923535f7 1113 SMART SM00958 411 540 4.1E-34 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 Pfam PF13424 Tetratricopeptide repeat 70 139 5.8E-10 T 22-04-2016 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 Pfam PF13424 Tetratricopeptide repeat 146 217 1.0E-9 T 22-04-2016 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 SMART SM00028 107 140 4.7E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 SMART SM00028 187 220 190.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 SMART SM00028 147 180 1.6E-7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 PANTHER PTHR24423 8 20 4.2E-40 T 22-04-2016 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 PANTHER PTHR24423 362 599 4.2E-40 T 22-04-2016 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 489 599 1.8E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 SUPERFAMILY SSF48452 30 137 1.59E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 Gene3D G3DSA:1.25.40.10 119 333 5.9E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 Gene3D G3DSA:1.25.40.10 26 118 2.5E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 Gene3D G3DSA:3.30.565.10 447 599 8.8E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 Gene3D G3DSA:1.10.287.130 368 438 1.7E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 SUPERFAMILY SSF47384 363 444 1.33E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 SMART SM00387 488 602 3.3E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 SUPERFAMILY SSF48452 97 292 1.26E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 600 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 581 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PGJ_RS02200 61db84390ebb9ff8b0943e89479a67ce 602 SUPERFAMILY SSF55874 433 599 8.12E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS07900 8f63503878b72a51d5549bc7ff63bbe3 498 Gene3D G3DSA:1.10.710.10 139 330 4.4E-15 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 PGJ_RS07900 8f63503878b72a51d5549bc7ff63bbe3 498 Pfam PF02335 Cytochrome c552 60 489 2.5E-171 T 22-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 PGJ_RS07900 8f63503878b72a51d5549bc7ff63bbe3 498 SUPERFAMILY SSF48695 51 490 2.54E-164 T 22-04-2016 IPR011031 Multihaem cytochrome PGJ_RS07900 8f63503878b72a51d5549bc7ff63bbe3 498 PANTHER PTHR30633 1 497 1.5E-136 T 22-04-2016 PGJ_RS07900 8f63503878b72a51d5549bc7ff63bbe3 498 Hamap MF_01182 Cytochrome c-552 [nrfA]. 11 495 50.535 T 22-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 PGJ_RS07900 8f63503878b72a51d5549bc7ff63bbe3 498 Gene3D G3DSA:1.20.140.10 331 463 1.8E-53 T 22-04-2016 PGJ_RS07900 8f63503878b72a51d5549bc7ff63bbe3 498 PIRSF PIRSF000243 4 498 1.2E-192 T 22-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 PGJ_RS06730 c546b7316c67ad57f564a9b44f283081 715 Pfam PF13623 SurA N-terminal domain 4 133 5.8E-32 T 22-04-2016 PGJ_RS06730 c546b7316c67ad57f564a9b44f283081 715 Pfam PF13616 PPIC-type PPIASE domain 347 463 1.5E-22 T 22-04-2016 PGJ_RS06730 c546b7316c67ad57f564a9b44f283081 715 SUPERFAMILY SSF109998 43 166 7.06E-14 T 22-04-2016 IPR027304 Trigger factor/SurA domain PGJ_RS06730 c546b7316c67ad57f564a9b44f283081 715 SUPERFAMILY SSF109998 229 276 7.06E-14 T 22-04-2016 IPR027304 Trigger factor/SurA domain PGJ_RS06730 c546b7316c67ad57f564a9b44f283081 715 Gene3D G3DSA:3.10.50.40 362 415 1.4E-6 T 22-04-2016 PGJ_RS06730 c546b7316c67ad57f564a9b44f283081 715 SUPERFAMILY SSF54534 372 415 9.16E-6 T 22-04-2016 PGJ_RS09610 7714412c8dbf0db9fa5d3d00bb187b2f 299 Gene3D G3DSA:3.40.50.300 11 193 1.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09610 7714412c8dbf0db9fa5d3d00bb187b2f 299 Pfam PF07650 KH domain 209 285 3.2E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 PGJ_RS09610 7714412c8dbf0db9fa5d3d00bb187b2f 299 Hamap MF_00367 GTPase Era [era]. 8 296 33.663 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 PGJ_RS09610 7714412c8dbf0db9fa5d3d00bb187b2f 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 167 3.0E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS09610 7714412c8dbf0db9fa5d3d00bb187b2f 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 11 279 2.7E-75 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 PGJ_RS09610 7714412c8dbf0db9fa5d3d00bb187b2f 299 Gene3D G3DSA:3.30.300.20 194 292 2.7E-38 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PGJ_RS09610 7714412c8dbf0db9fa5d3d00bb187b2f 299 PANTHER PTHR11649:SF3 8 297 1.2E-103 T 22-04-2016 PGJ_RS09610 7714412c8dbf0db9fa5d3d00bb187b2f 299 SUPERFAMILY SSF54814 183 297 1.31E-39 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PGJ_RS09610 7714412c8dbf0db9fa5d3d00bb187b2f 299 SUPERFAMILY SSF52540 15 206 2.47E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09610 7714412c8dbf0db9fa5d3d00bb187b2f 299 PANTHER PTHR11649 8 297 1.2E-103 T 22-04-2016 PGJ_RS09610 7714412c8dbf0db9fa5d3d00bb187b2f 299 Pfam PF01926 50S ribosome-binding GTPase 13 126 1.1E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 Gene3D G3DSA:3.40.50.261 298 428 3.3E-4 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 Gene3D G3DSA:3.40.50.261 132 290 2.4E-15 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 Pfam PF13549 ATP-grasp domain 473 681 1.6E-51 T 22-04-2016 PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 PANTHER PTHR33303 5 437 1.4E-173 T 22-04-2016 PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 PANTHER PTHR33303 455 682 1.4E-173 T 22-04-2016 PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 SMART SM00881 6 101 1.3E-29 T 22-04-2016 IPR003781 CoA-binding GO:0048037 PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 Gene3D G3DSA:3.40.50.720 5 131 1.6E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 Pfam PF13380 CoA binding domain 10 136 6.0E-22 T 22-04-2016 IPR003781 CoA-binding GO:0048037 PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 154 293 3.7E-40 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 SUPERFAMILY SSF51735 4 138 1.97E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 SUPERFAMILY SSF52210 301 453 3.79E-21 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 SUPERFAMILY SSF56059 487 683 5.16E-28 T 22-04-2016 PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 PANTHER PTHR33303:SF3 5 437 1.4E-173 T 22-04-2016 PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 PANTHER PTHR33303:SF3 455 682 1.4E-173 T 22-04-2016 PGJ_RS02635 0bc94edc17061b6c7956f510ade41948 685 SUPERFAMILY SSF52210 133 293 6.15E-27 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PGJ_RS04485 78cf7e0782d3f2401ecc4d0c1932af27 634 Gene3D G3DSA:3.80.30.20 304 553 3.5E-44 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PGJ_RS04485 78cf7e0782d3f2401ecc4d0c1932af27 634 Pfam PF04055 Radical SAM superfamily 310 522 6.7E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS04485 78cf7e0782d3f2401ecc4d0c1932af27 634 PANTHER PTHR32331 1 607 0.0 T 22-04-2016 PGJ_RS04485 78cf7e0782d3f2401ecc4d0c1932af27 634 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 10 577 7.5E-237 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 PGJ_RS04485 78cf7e0782d3f2401ecc4d0c1932af27 634 Pfam PF08497 Radical SAM N-terminal 10 309 5.3E-125 T 22-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal PGJ_RS04485 78cf7e0782d3f2401ecc4d0c1932af27 634 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 310 330 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PGJ_RS04485 78cf7e0782d3f2401ecc4d0c1932af27 634 SMART SM00729 306 565 6.8E-9 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PGJ_RS04485 78cf7e0782d3f2401ecc4d0c1932af27 634 SUPERFAMILY SSF102114 309 559 4.81E-11 T 22-04-2016 PGJ_RS04485 78cf7e0782d3f2401ecc4d0c1932af27 634 Pfam PF11842 Domain of unknown function (DUF3362) 533 604 4.9E-10 T 22-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal PGJ_RS00735 b5d766e79bc4040ab96c740d7e25fac3 689 PANTHER PTHR11733 45 689 3.1E-188 T 22-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 PGJ_RS00735 b5d766e79bc4040ab96c740d7e25fac3 689 PANTHER PTHR11733:SF65 45 689 3.1E-188 T 22-04-2016 PGJ_RS00735 b5d766e79bc4040ab96c740d7e25fac3 689 Pfam PF01431 Peptidase family M13 485 686 8.7E-85 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 PGJ_RS00735 b5d766e79bc4040ab96c740d7e25fac3 689 Pfam PF05649 Peptidase family M13 54 433 2.5E-92 T 22-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 PGJ_RS00735 b5d766e79bc4040ab96c740d7e25fac3 689 Gene3D G3DSA:3.40.390.10 476 689 2.8E-106 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PGJ_RS00735 b5d766e79bc4040ab96c740d7e25fac3 689 Gene3D G3DSA:3.40.390.10 316 436 2.8E-106 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PGJ_RS00735 b5d766e79bc4040ab96c740d7e25fac3 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 587 598 9.5E-23 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 PGJ_RS00735 b5d766e79bc4040ab96c740d7e25fac3 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 495 507 9.5E-23 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 PGJ_RS00735 b5d766e79bc4040ab96c740d7e25fac3 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 516 532 9.5E-23 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 PGJ_RS00735 b5d766e79bc4040ab96c740d7e25fac3 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 477 489 9.5E-23 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 PGJ_RS00735 b5d766e79bc4040ab96c740d7e25fac3 689 SUPERFAMILY SSF55486 42 689 1.14E-207 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 Gene3D G3DSA:3.40.50.1000 544 685 1.5E-51 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 Gene3D G3DSA:3.40.50.1000 394 438 1.5E-51 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 617 636 3.3E-17 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 270 284 3.3E-17 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 564 574 3.3E-17 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 640 652 3.3E-17 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 422 436 3.3E-17 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 Pfam PF00122 E1-E2 ATPase 191 413 8.2E-70 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 192 696 1.0E-88 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 424 430 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 Pfam PF00702 haloacid dehalogenase-like hydrolase 418 631 7.1E-38 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PANTHER PTHR24093 3 732 8.8E-230 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 152 726 2.8E-181 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 Gene3D G3DSA:3.30.70.100 4 78 2.8E-18 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 Gene3D G3DSA:3.40.1110.10 443 543 9.6E-8 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 SUPERFAMILY SSF81665 666 702 1.57E-14 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 SUPERFAMILY SSF81665 188 224 1.57E-14 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 SUPERFAMILY SSF81665 321 416 1.57E-14 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PANTHER PTHR24093:SF50 3 732 8.8E-230 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 133 727 8.4E-177 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PRINTS PR00943 Copper-transporting ATPase signature 137 156 5.3E-12 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PRINTS PR00943 Copper-transporting ATPase signature 190 209 5.3E-12 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PRINTS PR00943 Copper-transporting ATPase signature 210 228 5.3E-12 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PRINTS PR00943 Copper-transporting ATPase signature 405 420 5.3E-12 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PRINTS PR00943 Copper-transporting ATPase signature 343 357 5.3E-12 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PRINTS PR00943 Copper-transporting ATPase signature 48 68 5.3E-12 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 PRINTS PR00943 Copper-transporting ATPase signature 594 611 5.3E-12 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 Pfam PF00403 Heavy-metal-associated domain 7 67 5.4E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 SUPERFAMILY SSF55008 3 74 3.14E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 SUPERFAMILY SSF81653 223 320 3.66E-28 T 22-04-2016 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 Gene3D G3DSA:2.70.150.10 185 320 3.7E-31 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 SUPERFAMILY SSF56784 479 724 2.36E-54 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS01395 ee937b7ba5cdf8b2a7cfb13157d306cf 735 SUPERFAMILY SSF56784 421 441 2.36E-54 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS06005 c09b091e278b861f72f02d85170d9540 188 PIRSF PIRSF000239 1 188 1.5E-57 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PGJ_RS06005 c09b091e278b861f72f02d85170d9540 188 PANTHER PTHR10681:SF121 4 188 2.1E-84 T 22-04-2016 PGJ_RS06005 c09b091e278b861f72f02d85170d9540 188 Gene3D G3DSA:3.40.30.10 6 185 1.8E-63 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS06005 c09b091e278b861f72f02d85170d9540 188 PANTHER PTHR10681 4 188 2.1E-84 T 22-04-2016 PGJ_RS06005 c09b091e278b861f72f02d85170d9540 188 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 157 183 7.9E-6 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PGJ_RS06005 c09b091e278b861f72f02d85170d9540 188 Pfam PF00578 AhpC/TSA family 8 133 5.7E-34 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PGJ_RS06005 c09b091e278b861f72f02d85170d9540 188 SUPERFAMILY SSF52833 1 187 2.89E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS06005 c09b091e278b861f72f02d85170d9540 188 TIGRFAM TIGR03137 AhpC: peroxiredoxin 3 188 2.3E-99 T 22-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PGJ_RS09910 ab9ab952162fcf4febd6819b3a31dcf8 538 SUPERFAMILY SSF52540 381 513 2.34E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09910 ab9ab952162fcf4febd6819b3a31dcf8 538 SUPERFAMILY SSF52540 234 290 2.34E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09910 ab9ab952162fcf4febd6819b3a31dcf8 538 SMART SM00382 26 226 2.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS09910 ab9ab952162fcf4febd6819b3a31dcf8 538 PANTHER PTHR19211:SF38 1 536 0.0 T 22-04-2016 PGJ_RS09910 ab9ab952162fcf4febd6819b3a31dcf8 538 Gene3D G3DSA:3.40.50.300 1 272 1.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09910 ab9ab952162fcf4febd6819b3a31dcf8 538 Gene3D G3DSA:3.40.50.300 317 529 3.0E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09910 ab9ab952162fcf4febd6819b3a31dcf8 538 SUPERFAMILY SSF52540 125 257 1.29E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09910 ab9ab952162fcf4febd6819b3a31dcf8 538 SUPERFAMILY SSF52540 2 92 1.29E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09910 ab9ab952162fcf4febd6819b3a31dcf8 538 Pfam PF00005 ABC transporter 18 184 1.6E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS09910 ab9ab952162fcf4febd6819b3a31dcf8 538 Pfam PF00005 ABC transporter 336 466 3.9E-7 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS09910 ab9ab952162fcf4febd6819b3a31dcf8 538 PANTHER PTHR19211 1 536 0.0 T 22-04-2016 PGJ_RS09910 ab9ab952162fcf4febd6819b3a31dcf8 538 Pfam PF12848 ABC transporter 223 303 1.3E-20 T 22-04-2016 IPR032781 ABC-transporter extension domain PGJ_RS06400 6bfa75ffb14217dd940d127655389e1e 89 PRINTS PR00297 10kDa chaperonin signature 25 46 1.4E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PGJ_RS06400 6bfa75ffb14217dd940d127655389e1e 89 PRINTS PR00297 10kDa chaperonin signature 76 89 1.4E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PGJ_RS06400 6bfa75ffb14217dd940d127655389e1e 89 PRINTS PR00297 10kDa chaperonin signature 3 18 1.4E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PGJ_RS06400 6bfa75ffb14217dd940d127655389e1e 89 PRINTS PR00297 10kDa chaperonin signature 55 67 1.4E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PGJ_RS06400 6bfa75ffb14217dd940d127655389e1e 89 Gene3D G3DSA:2.30.33.40 1 89 5.9E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PGJ_RS06400 6bfa75ffb14217dd940d127655389e1e 89 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 PGJ_RS06400 6bfa75ffb14217dd940d127655389e1e 89 Pfam PF00166 Chaperonin 10 Kd subunit 2 89 5.6E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PGJ_RS06400 6bfa75ffb14217dd940d127655389e1e 89 SUPERFAMILY SSF50129 1 89 6.95E-31 T 22-04-2016 IPR011032 GroES-like PGJ_RS06400 6bfa75ffb14217dd940d127655389e1e 89 SMART SM00883 2 89 4.3E-50 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PGJ_RS06400 6bfa75ffb14217dd940d127655389e1e 89 Hamap MF_00580 10 kDa chaperonin [groS]. 2 89 22.993 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PGJ_RS06400 6bfa75ffb14217dd940d127655389e1e 89 PANTHER PTHR10772 1 89 7.0E-40 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PGJ_RS08365 438361545971ba15a98fa344d5080c69 134 Gene3D G3DSA:3.90.470.10 20 128 1.8E-34 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08365 438361545971ba15a98fa344d5080c69 134 PANTHER PTHR13501 11 126 2.0E-35 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 PGJ_RS08365 438361545971ba15a98fa344d5080c69 134 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 22 126 9.9E-30 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 PGJ_RS08365 438361545971ba15a98fa344d5080c69 134 SUPERFAMILY SSF54843 13 129 1.31E-34 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08365 438361545971ba15a98fa344d5080c69 134 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 18 129 23.911 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 PGJ_RS08365 438361545971ba15a98fa344d5080c69 134 Pfam PF00237 Ribosomal protein L22p/L17e 25 126 7.6E-27 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07990 8b480d7e3de45f37862e68c69f3f7410 1733 SUPERFAMILY SSF52129 232 568 1.26E-88 T 22-04-2016 IPR029030 Caspase-like domain PGJ_RS07990 8b480d7e3de45f37862e68c69f3f7410 1733 Pfam PF08126 Propeptide_C25 46 207 2.9E-19 T 22-04-2016 IPR012600 Gingipain propeptide GO:0004197 PGJ_RS07990 8b480d7e3de45f37862e68c69f3f7410 1733 Pfam PF07675 Cleaved Adhesin Domain 984 1151 5.1E-59 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS07990 8b480d7e3de45f37862e68c69f3f7410 1733 Pfam PF07675 Cleaved Adhesin Domain 1430 1600 9.4E-61 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS07990 8b480d7e3de45f37862e68c69f3f7410 1733 Pfam PF07675 Cleaved Adhesin Domain 1161 1330 1.7E-74 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS07990 8b480d7e3de45f37862e68c69f3f7410 1733 Gene3D G3DSA:3.40.50.10390 238 353 4.3E-26 T 22-04-2016 IPR029031 Gingipain, N-terminal PGJ_RS07990 8b480d7e3de45f37862e68c69f3f7410 1733 Pfam PF01364 Peptidase family C25 244 594 6.5E-83 T 22-04-2016 IPR001769 Gingipain GO:0006508|GO:0008234 PGJ_RS07990 8b480d7e3de45f37862e68c69f3f7410 1733 Gene3D G3DSA:3.40.50.1460 354 596 1.4E-60 T 22-04-2016 IPR029030 Caspase-like domain PGJ_RS07990 8b480d7e3de45f37862e68c69f3f7410 1733 Gene3D G3DSA:2.60.40.10 605 680 5.3E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold PGJ_RS07990 8b480d7e3de45f37862e68c69f3f7410 1733 Pfam PF03785 Peptidase family C25, C terminal ig-like domain 600 679 4.9E-20 T 22-04-2016 IPR005536 Peptidase C25, Ig-like domain GO:0006508|GO:0008233 PGJ_RS07990 8b480d7e3de45f37862e68c69f3f7410 1733 Pfam PF10365 Domain of unknown function (DUF2436) 716 877 3.0E-83 T 22-04-2016 IPR018832 Peptidase C25, gingipain, C-terminal PGJ_RS02155 c0f951328c66f0ec6c447b78b77e864b 147 Gene3D G3DSA:3.30.70.560 3 140 4.9E-42 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PGJ_RS02155 c0f951328c66f0ec6c447b78b77e864b 147 PANTHER PTHR20941 1 136 1.9E-46 T 22-04-2016 PGJ_RS02155 c0f951328c66f0ec6c447b78b77e864b 147 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 136 1.4E-34 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PGJ_RS02155 c0f951328c66f0ec6c447b78b77e864b 147 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 136 6.8E-33 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PGJ_RS02155 c0f951328c66f0ec6c447b78b77e864b 147 SUPERFAMILY SSF55083 1 139 1.27E-39 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PGJ_RS01575 bd2f5cdfaa1949f15d6c31025ab66e04 219 SUPERFAMILY SSF52540 1 217 2.88E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01575 bd2f5cdfaa1949f15d6c31025ab66e04 219 PANTHER PTHR24220 3 217 3.6E-110 T 22-04-2016 PGJ_RS01575 bd2f5cdfaa1949f15d6c31025ab66e04 219 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS01575 bd2f5cdfaa1949f15d6c31025ab66e04 219 Pfam PF00005 ABC transporter 20 168 1.6E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS01575 bd2f5cdfaa1949f15d6c31025ab66e04 219 SMART SM00382 29 215 2.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS01575 bd2f5cdfaa1949f15d6c31025ab66e04 219 PANTHER PTHR24220:SF86 3 217 3.6E-110 T 22-04-2016 PGJ_RS01575 bd2f5cdfaa1949f15d6c31025ab66e04 219 Gene3D G3DSA:3.40.50.300 1 217 1.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 PANTHER PTHR23274 20 537 7.7E-114 T 22-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 Pfam PF05970 PIF1-like helicase 28 278 6.0E-29 T 22-04-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 SUPERFAMILY SSF48452 467 496 2.33E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 SUPERFAMILY SSF48452 530 663 2.33E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 Gene3D G3DSA:1.25.40.10 466 663 1.2E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 Pfam PF13538 UvrD-like helicase C-terminal domain 385 423 6.3E-7 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 SUPERFAMILY SSF52540 377 433 1.46E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 SUPERFAMILY SSF52540 153 344 1.46E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 SUPERFAMILY SSF52540 30 212 2.88E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 SMART SM00028 467 500 340.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 SMART SM00028 610 643 42.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 SMART SM00028 576 609 8.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 SMART SM00028 541 575 130.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 Pfam PF13181 Tetratricopeptide repeat 612 642 0.13 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 Pfam PF13432 Tetratricopeptide repeat 555 607 0.0083 T 22-04-2016 PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 Gene3D G3DSA:3.40.50.300 21 161 3.6E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 SMART SM00382 33 341 3.1E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 Gene3D G3DSA:3.40.50.300 373 427 5.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00265 4e6e84aa957bb10f8e376c55cf6e530a 680 Gene3D G3DSA:3.40.50.300 162 277 5.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00585 bfbcfd58c28176425936af3e2e8f691c 345 SUPERFAMILY SSF53800 16 345 1.8E-71 T 22-04-2016 PGJ_RS00585 bfbcfd58c28176425936af3e2e8f691c 345 Pfam PF00762 Ferrochelatase 16 344 3.7E-80 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PGJ_RS00585 bfbcfd58c28176425936af3e2e8f691c 345 PANTHER PTHR11108 17 211 1.6E-60 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PGJ_RS00585 bfbcfd58c28176425936af3e2e8f691c 345 PANTHER PTHR11108 234 345 1.6E-60 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PGJ_RS00585 bfbcfd58c28176425936af3e2e8f691c 345 TIGRFAM TIGR00109 hemH: ferrochelatase 12 207 4.0E-38 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PGJ_RS00585 bfbcfd58c28176425936af3e2e8f691c 345 Gene3D G3DSA:3.40.50.1400 16 198 2.7E-42 T 22-04-2016 PGJ_RS00585 bfbcfd58c28176425936af3e2e8f691c 345 Gene3D G3DSA:3.40.50.1400 199 345 6.3E-26 T 22-04-2016 PGJ_RS00585 bfbcfd58c28176425936af3e2e8f691c 345 Hamap MF_00323 Ferrochelatase [hemH]. 13 345 29.928 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PGJ_RS08380 b62a625eb8f7bfb330d185b1a636eba4 97 PANTHER PTHR11620 77 97 6.8E-19 T 22-04-2016 PGJ_RS08380 b62a625eb8f7bfb330d185b1a636eba4 97 PANTHER PTHR11620 1 59 6.8E-19 T 22-04-2016 PGJ_RS08380 b62a625eb8f7bfb330d185b1a636eba4 97 Pfam PF00276 Ribosomal protein L23 3 93 6.9E-32 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08380 b62a625eb8f7bfb330d185b1a636eba4 97 SUPERFAMILY SSF54189 1 96 9.71E-29 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08380 b62a625eb8f7bfb330d185b1a636eba4 97 ProSitePatterns PS00050 Ribosomal protein L23 signature. 79 94 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site PGJ_RS08380 b62a625eb8f7bfb330d185b1a636eba4 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 1 96 21.694 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08380 b62a625eb8f7bfb330d185b1a636eba4 97 Gene3D G3DSA:3.30.70.330 1 97 1.7E-33 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 PGJ_RS08455 7e0545c633101c713c3cb5d8b6d789e4 334 PIRSF PIRSF000102 3 322 2.1E-78 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PGJ_RS08455 7e0545c633101c713c3cb5d8b6d789e4 334 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 316 3.4E-13 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 PGJ_RS08455 7e0545c633101c713c3cb5d8b6d789e4 334 Gene3D G3DSA:3.40.50.720 8 146 6.0E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS08455 7e0545c633101c713c3cb5d8b6d789e4 334 SUPERFAMILY SSF51735 8 145 1.16E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS08455 7e0545c633101c713c3cb5d8b6d789e4 334 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 145 2.9E-30 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 PGJ_RS08455 7e0545c633101c713c3cb5d8b6d789e4 334 PANTHER PTHR23382:SF0 11 252 3.3E-56 T 22-04-2016 PGJ_RS08455 7e0545c633101c713c3cb5d8b6d789e4 334 PANTHER PTHR23382 11 252 3.3E-56 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 PGJ_RS08455 7e0545c633101c713c3cb5d8b6d789e4 334 Gene3D G3DSA:3.90.110.10 151 314 1.6E-30 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PGJ_RS08455 7e0545c633101c713c3cb5d8b6d789e4 334 SUPERFAMILY SSF56327 151 328 1.0E-34 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PGJ_RS02170 c02d6a3e8d63eb75d40c90486a39f63b 280 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 265 1.4E-66 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PGJ_RS02170 c02d6a3e8d63eb75d40c90486a39f63b 280 PANTHER PTHR30622 1 280 2.5E-94 T 22-04-2016 PGJ_RS02170 c02d6a3e8d63eb75d40c90486a39f63b 280 Pfam PF02673 Bacitracin resistance protein BacA 6 266 6.7E-76 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PGJ_RS02170 c02d6a3e8d63eb75d40c90486a39f63b 280 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 272 17.905 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PGJ_RS02170 c02d6a3e8d63eb75d40c90486a39f63b 280 PANTHER PTHR30622:SF3 1 280 2.5E-94 T 22-04-2016 PGJ_RS09705 b08d355b84d6e39fd251dc76057042f8 299 SUPERFAMILY SSF46689 245 294 9.86E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09705 b08d355b84d6e39fd251dc76057042f8 299 PANTHER PTHR11019 197 299 5.3E-16 T 22-04-2016 PGJ_RS09705 b08d355b84d6e39fd251dc76057042f8 299 Gene3D G3DSA:1.10.10.60 205 246 1.0E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09705 b08d355b84d6e39fd251dc76057042f8 299 SMART SM00342 207 291 2.7E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PGJ_RS09705 b08d355b84d6e39fd251dc76057042f8 299 Gene3D G3DSA:1.10.10.60 247 294 2.1E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09705 b08d355b84d6e39fd251dc76057042f8 299 Pfam PF12833 Helix-turn-helix domain 214 292 8.3E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PGJ_RS03970 ee13548986dc2586644e03d797c82339 290 PANTHER PTHR10000 88 265 1.9E-42 T 22-04-2016 PGJ_RS03970 ee13548986dc2586644e03d797c82339 290 Pfam PF12710 haloacid dehalogenase-like hydrolase 90 257 2.6E-19 T 22-04-2016 PGJ_RS03970 ee13548986dc2586644e03d797c82339 290 Gene3D G3DSA:3.40.50.1000 151 269 2.5E-28 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS03970 ee13548986dc2586644e03d797c82339 290 Gene3D G3DSA:1.10.150.210 100 150 2.1E-12 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 PGJ_RS03970 ee13548986dc2586644e03d797c82339 290 PANTHER PTHR10000:SF7 88 265 1.9E-42 T 22-04-2016 PGJ_RS03970 ee13548986dc2586644e03d797c82339 290 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 89 257 1.7E-33 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PGJ_RS03970 ee13548986dc2586644e03d797c82339 290 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 87 268 7.3E-49 T 22-04-2016 PGJ_RS03970 ee13548986dc2586644e03d797c82339 290 SUPERFAMILY SSF56784 86 266 2.94E-36 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS06550 5fcf9fa47282c75947cfefdd06f3e684 322 Gene3D G3DSA:3.90.580.10 19 102 1.3E-15 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PGJ_RS06550 5fcf9fa47282c75947cfefdd06f3e684 322 Pfam PF13155 Toprim-like 214 302 2.1E-10 T 22-04-2016 PGJ_RS06550 5fcf9fa47282c75947cfefdd06f3e684 322 Gene3D G3DSA:3.40.1360.10 210 313 1.0E-12 T 22-04-2016 PGJ_RS06550 5fcf9fa47282c75947cfefdd06f3e684 322 SUPERFAMILY SSF57783 19 102 1.62E-16 T 22-04-2016 PGJ_RS01975 eba8fe0b38a0290eea3bfab25d309099 265 PANTHER PTHR32552 59 260 2.1E-48 T 22-04-2016 PGJ_RS01975 eba8fe0b38a0290eea3bfab25d309099 265 Gene3D G3DSA:3.30.420.10 101 256 9.6E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS01975 eba8fe0b38a0290eea3bfab25d309099 265 PANTHER PTHR32552:SF23 59 260 2.1E-48 T 22-04-2016 PGJ_RS01975 eba8fe0b38a0290eea3bfab25d309099 265 Pfam PF00665 Integrase core domain 104 218 1.2E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS01975 eba8fe0b38a0290eea3bfab25d309099 265 SUPERFAMILY SSF53098 102 257 5.01E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS01840 ab9d54375a398808fa2be8f59e030393 126 SUPERFAMILY SSF142906 1 114 5.36E-41 T 22-04-2016 PGJ_RS01840 ab9d54375a398808fa2be8f59e030393 126 Pfam PF04237 YjbR 11 102 8.2E-29 T 22-04-2016 IPR007351 Uncharacterised protein YjbR PGJ_RS01840 ab9d54375a398808fa2be8f59e030393 126 PANTHER PTHR35145 1 118 7.9E-39 T 22-04-2016 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 Gene3D G3DSA:3.30.479.20 236 271 4.1E-24 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 Gene3D G3DSA:3.30.479.20 175 190 4.1E-24 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 Gene3D G3DSA:3.30.479.20 56 92 4.1E-24 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 Gene3D G3DSA:1.10.8.10 1 54 1.0E-23 T 22-04-2016 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 Hamap MF_00050 Elongation factor Ts [tsf]. 1 274 59.121 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 PANTHER PTHR11741 1 271 2.1E-87 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 Pfam PF00889 Elongation factor TS 70 271 8.3E-64 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 SUPERFAMILY SSF46934 1 54 9.35E-17 T 22-04-2016 IPR009060 UBA-like GO:0005515 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 SUPERFAMILY SSF54713 174 271 9.16E-39 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 SUPERFAMILY SSF54713 56 91 9.16E-39 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 Gene3D G3DSA:1.10.286.20 191 235 6.1E-15 T 22-04-2016 PGJ_RS07105 fed2a97e5af18d697b1825373d24d5c5 274 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 271 6.1E-69 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 PGJ_RS05455 d05eaad55e089b39c8bab3dc708d1b05 791 Pfam PF02687 FtsX-like permease family 286 399 2.0E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS05455 d05eaad55e089b39c8bab3dc708d1b05 791 Pfam PF02687 FtsX-like permease family 672 784 1.9E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS05455 d05eaad55e089b39c8bab3dc708d1b05 791 Pfam PF12704 MacB-like periplasmic core domain 23 240 1.4E-13 T 22-04-2016 IPR025857 MacB-like periplasmic core domain PGJ_RS05455 d05eaad55e089b39c8bab3dc708d1b05 791 PANTHER PTHR30489 290 791 2.3E-35 T 22-04-2016 PGJ_RS05455 d05eaad55e089b39c8bab3dc708d1b05 791 PANTHER PTHR30489:SF5 290 791 2.3E-35 T 22-04-2016 PGJ_RS06570 dd9575c2f0e699ac23b4929a0e74b523 228 Gene3D G3DSA:3.40.50.1580 3 226 5.9E-59 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PGJ_RS06570 dd9575c2f0e699ac23b4929a0e74b523 228 PANTHER PTHR21234 4 208 4.3E-35 T 22-04-2016 IPR018017 Nucleoside phosphorylase PGJ_RS06570 dd9575c2f0e699ac23b4929a0e74b523 228 Pfam PF01048 Phosphorylase superfamily 4 225 4.3E-47 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PGJ_RS06570 dd9575c2f0e699ac23b4929a0e74b523 228 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 5 214 6.2E-44 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 PGJ_RS06570 dd9575c2f0e699ac23b4929a0e74b523 228 SUPERFAMILY SSF53167 4 228 1.96E-57 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PGJ_RS03575 116ca9fe770a540d7bbb9880b6c8f3e1 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 255 8.2E-68 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PGJ_RS03575 116ca9fe770a540d7bbb9880b6c8f3e1 256 Gene3D G3DSA:3.90.226.10 2 255 2.1E-94 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS03575 116ca9fe770a540d7bbb9880b6c8f3e1 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PGJ_RS03575 116ca9fe770a540d7bbb9880b6c8f3e1 256 SUPERFAMILY SSF52096 2 255 1.4E-87 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS03575 116ca9fe770a540d7bbb9880b6c8f3e1 256 PANTHER PTHR11941 1 255 5.1E-104 T 22-04-2016 PGJ_RS03575 116ca9fe770a540d7bbb9880b6c8f3e1 256 PANTHER PTHR11941:SF54 1 255 5.1E-104 T 22-04-2016 PGJ_RS07915 872f804975dfbc7073dfd486b1722b9c 204 SUPERFAMILY SSF103515 50 204 5.89E-6 T 22-04-2016 IPR005546 Autotransporter beta-domain PGJ_RS07915 872f804975dfbc7073dfd486b1722b9c 204 Pfam PF13568 Outer membrane protein beta-barrel domain 25 181 6.7E-18 T 22-04-2016 IPR025665 Outer membrane protein beta-barrel domain PGJ_RS05710 a8926ddeba25668060f3ad54ba9f5468 306 Pfam PF13595 Domain of unknown function (DUF4138) 47 300 7.3E-104 T 22-04-2016 IPR022298 Conjugative transposon, TraN PGJ_RS05710 a8926ddeba25668060f3ad54ba9f5468 306 TIGRFAM TIGR03780 Bac_Flav_CT_N: Bacteroides conjugative transposon TraN protein 1 299 2.9E-122 T 22-04-2016 IPR022298 Conjugative transposon, TraN PGJ_RS07455 1704b4a7bc7f9079f1a8ab9b6ca6aaff 192 Pfam PF09374 Predicted Peptidoglycan domain 101 187 4.5E-26 T 22-04-2016 IPR018537 Peptidoglycan binding domain PGJ_RS07455 1704b4a7bc7f9079f1a8ab9b6ca6aaff 192 Pfam PF05838 Glycosyl hydrolase 108 10 99 3.7E-20 T 22-04-2016 IPR008565 Protein of unknown function DUF847 PGJ_RS07455 1704b4a7bc7f9079f1a8ab9b6ca6aaff 192 Gene3D G3DSA:1.20.141.10 1 190 9.3E-57 T 22-04-2016 PGJ_RS07455 1704b4a7bc7f9079f1a8ab9b6ca6aaff 192 SUPERFAMILY SSF53955 1 190 1.04E-52 T 22-04-2016 IPR023346 Lysozyme-like domain PGJ_RS07455 1704b4a7bc7f9079f1a8ab9b6ca6aaff 192 ProSitePatterns PS00018 EF-hand calcium-binding domain. 44 56 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site PGJ_RS03140 927efe9ce52885c0720bb5f2e6e9f76f 216 Gene3D G3DSA:3.30.420.10 88 197 5.4E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS03140 927efe9ce52885c0720bb5f2e6e9f76f 216 PIRSF PIRSF037839 1 216 3.3E-106 T 22-04-2016 IPR017290 Ribonuclease H, bacteria GO:0004523 PGJ_RS03140 927efe9ce52885c0720bb5f2e6e9f76f 216 Pfam PF00075 RNase H 89 192 7.5E-8 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 PGJ_RS03140 927efe9ce52885c0720bb5f2e6e9f76f 216 PANTHER PTHR10642 1 162 2.9E-20 T 22-04-2016 PGJ_RS03140 927efe9ce52885c0720bb5f2e6e9f76f 216 SUPERFAMILY SSF55658 3 47 6.8E-14 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PGJ_RS03140 927efe9ce52885c0720bb5f2e6e9f76f 216 Gene3D G3DSA:3.40.970.10 1 49 1.8E-20 T 22-04-2016 IPR011320 Ribonuclease H1, N-terminal PGJ_RS03140 927efe9ce52885c0720bb5f2e6e9f76f 216 Pfam PF01693 Caulimovirus viroplasmin 4 44 1.3E-17 T 22-04-2016 IPR011320 Ribonuclease H1, N-terminal PGJ_RS03140 927efe9ce52885c0720bb5f2e6e9f76f 216 SUPERFAMILY SSF53098 84 212 1.26E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS06750 240ee5787bd7bb4e5ffe995addcdea7f 434 SUPERFAMILY SSF56935 53 336 1.04E-11 T 22-04-2016 PGJ_RS06750 240ee5787bd7bb4e5ffe995addcdea7f 434 Gene3D G3DSA:2.40.160.60 54 365 4.9E-23 T 22-04-2016 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 115 125 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 PANTHER PTHR11964 411 422 4.9E-208 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 PANTHER PTHR11964 2 391 4.9E-208 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 391 1.2E-154 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 281 289 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 Gene3D G3DSA:3.30.300.10 10 134 3.9E-46 T 22-04-2016 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 426 52.28 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 Gene3D G3DSA:3.30.300.10 135 255 3.8E-33 T 22-04-2016 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 SUPERFAMILY SSF55973 255 426 2.39E-59 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 255 389 1.8E-63 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 SUPERFAMILY SSF55973 111 254 2.75E-37 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 2 100 4.6E-42 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 SUPERFAMILY SSF55973 1 108 4.71E-44 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 Pfam PF02772 S-adenosylmethionine synthetase, central domain 113 253 1.8E-41 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 PIRSF PIRSF000497 1 427 1.0E-163 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PGJ_RS08215 1fd2f693a03db9b0c87c7fd1846b4c6d 429 Gene3D G3DSA:3.30.300.10 266 426 4.4E-65 T 22-04-2016 PGJ_RS01355 2c3453ca0fc2872b95beba4d99cfc72b 926 SUPERFAMILY SSF49464 27 121 3.92E-14 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS01355 2c3453ca0fc2872b95beba4d99cfc72b 926 Gene3D G3DSA:2.170.130.10 144 209 4.2E-4 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS01355 2c3453ca0fc2872b95beba4d99cfc72b 926 SUPERFAMILY SSF56935 371 728 1.33E-26 T 22-04-2016 PGJ_RS01355 2c3453ca0fc2872b95beba4d99cfc72b 926 SUPERFAMILY SSF56935 767 895 1.33E-26 T 22-04-2016 PGJ_RS01355 2c3453ca0fc2872b95beba4d99cfc72b 926 SUPERFAMILY SSF56935 145 292 1.33E-26 T 22-04-2016 PGJ_RS01355 2c3453ca0fc2872b95beba4d99cfc72b 926 PANTHER PTHR30069:SF12 1 356 4.6E-52 T 22-04-2016 PGJ_RS01355 2c3453ca0fc2872b95beba4d99cfc72b 926 PANTHER PTHR30069:SF12 401 894 4.6E-52 T 22-04-2016 PGJ_RS01355 2c3453ca0fc2872b95beba4d99cfc72b 926 Gene3D G3DSA:2.60.40.1120 27 125 5.9E-15 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS01355 2c3453ca0fc2872b95beba4d99cfc72b 926 PANTHER PTHR30069 1 356 4.6E-52 T 22-04-2016 PGJ_RS01355 2c3453ca0fc2872b95beba4d99cfc72b 926 PANTHER PTHR30069 401 894 4.6E-52 T 22-04-2016 PGJ_RS01355 2c3453ca0fc2872b95beba4d99cfc72b 926 Pfam PF13715 CarboxypepD_reg-like domain 28 120 9.1E-16 T 22-04-2016 PGJ_RS01355 2c3453ca0fc2872b95beba4d99cfc72b 926 Pfam PF14905 Outer membrane protein beta-barrel family 444 893 4.9E-34 T 22-04-2016 PGJ_RS04395 3ab19fe8449c0e2051cd29719de7a295 323 SUPERFAMILY SSF52374 21 181 2.95E-28 T 22-04-2016 PGJ_RS04395 3ab19fe8449c0e2051cd29719de7a295 323 SUPERFAMILY SSF82114 180 315 1.46E-42 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 PGJ_RS04395 3ab19fe8449c0e2051cd29719de7a295 323 PANTHER PTHR22749:SF0 24 323 1.4E-101 T 22-04-2016 PGJ_RS04395 3ab19fe8449c0e2051cd29719de7a295 323 Gene3D G3DSA:3.40.50.620 22 192 3.4E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS04395 3ab19fe8449c0e2051cd29719de7a295 323 PANTHER PTHR22749 24 323 1.4E-101 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 PGJ_RS04395 3ab19fe8449c0e2051cd29719de7a295 323 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 54 1.9E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PGJ_RS04395 3ab19fe8449c0e2051cd29719de7a295 323 PIRSF PIRSF004491 4 322 8.6E-107 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 PGJ_RS04395 3ab19fe8449c0e2051cd29719de7a295 323 Pfam PF06574 FAD synthetase 22 172 4.4E-42 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 PGJ_RS04395 3ab19fe8449c0e2051cd29719de7a295 323 Gene3D G3DSA:2.40.30.30 194 318 5.1E-40 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 PGJ_RS04395 3ab19fe8449c0e2051cd29719de7a295 323 SMART SM00904 189 315 3.3E-52 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 PGJ_RS04395 3ab19fe8449c0e2051cd29719de7a295 323 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 26 314 1.3E-76 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 PGJ_RS04395 3ab19fe8449c0e2051cd29719de7a295 323 Pfam PF01687 Riboflavin kinase 190 311 5.2E-34 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 PGJ_RS04945 6b39c25bd7fa028fb1c10984b38114c8 483 PANTHER PTHR13734 1 466 3.0E-94 T 22-04-2016 PGJ_RS04945 6b39c25bd7fa028fb1c10984b38114c8 483 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 186 246 5.8E-17 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PGJ_RS04945 6b39c25bd7fa028fb1c10984b38114c8 483 SUPERFAMILY SSF81891 157 459 3.66E-58 T 22-04-2016 PGJ_RS04945 6b39c25bd7fa028fb1c10984b38114c8 483 Pfam PF01743 Poly A polymerase head domain 30 156 4.1E-25 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 PGJ_RS04945 6b39c25bd7fa028fb1c10984b38114c8 483 Gene3D G3DSA:1.10.3090.10 157 344 3.5E-53 T 22-04-2016 PGJ_RS04945 6b39c25bd7fa028fb1c10984b38114c8 483 Gene3D G3DSA:1.10.3090.10 412 432 3.5E-53 T 22-04-2016 PGJ_RS04945 6b39c25bd7fa028fb1c10984b38114c8 483 Pfam PF01966 HD domain 264 348 3.1E-13 T 22-04-2016 IPR006674 HD domain PGJ_RS04945 6b39c25bd7fa028fb1c10984b38114c8 483 Gene3D G3DSA:3.30.460.10 14 153 7.6E-39 T 22-04-2016 PGJ_RS04945 6b39c25bd7fa028fb1c10984b38114c8 483 TIGRFAM TIGR00277 HDIG: HDIG domain 273 320 3.2E-10 T 22-04-2016 IPR006675 HDIG domain PGJ_RS04945 6b39c25bd7fa028fb1c10984b38114c8 483 PANTHER PTHR13734:SF5 1 466 3.0E-94 T 22-04-2016 PGJ_RS04945 6b39c25bd7fa028fb1c10984b38114c8 483 SUPERFAMILY SSF81301 11 153 1.2E-34 T 22-04-2016 PGJ_RS05820 3eefdec1abbe97402222a21db9c6e0d8 50 Pfam PF00468 Ribosomal protein L34 1 44 2.6E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS05820 3eefdec1abbe97402222a21db9c6e0d8 50 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS05820 3eefdec1abbe97402222a21db9c6e0d8 50 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.256 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS05820 3eefdec1abbe97402222a21db9c6e0d8 50 PANTHER PTHR14503 1 46 3.1E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS05820 3eefdec1abbe97402222a21db9c6e0d8 50 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 9.7E-25 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS05820 3eefdec1abbe97402222a21db9c6e0d8 50 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 26 2.0E-8 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07050 49886ab98ee95e7758ec1bd12e1562e8 67 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 19 63 4.0E-12 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PGJ_RS07050 49886ab98ee95e7758ec1bd12e1562e8 67 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 12 61 1.1E-16 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 PGJ_RS07050 49886ab98ee95e7758ec1bd12e1562e8 67 Hamap MF_00422 Protein translocase subunit SecE [secE]. 5 61 10.402 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE PGJ_RS07050 49886ab98ee95e7758ec1bd12e1562e8 67 Gene3D G3DSA:1.20.5.1030 5 63 2.4E-17 T 22-04-2016 PGJ_RS08110 84caac6bc01494de4790c101dd4b8c62 324 Pfam PF13444 Acetyltransferase (GNAT) domain 53 153 1.5E-11 T 22-04-2016 PGJ_RS08110 84caac6bc01494de4790c101dd4b8c62 324 PANTHER PTHR37323:SF1 3 322 5.5E-67 T 22-04-2016 PGJ_RS08110 84caac6bc01494de4790c101dd4b8c62 324 PANTHER PTHR37323 3 322 5.5E-67 T 22-04-2016 PGJ_RS08110 84caac6bc01494de4790c101dd4b8c62 324 SUPERFAMILY SSF55729 35 185 2.97E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS08110 84caac6bc01494de4790c101dd4b8c62 324 Gene3D G3DSA:3.40.630.30 41 153 6.5E-4 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS05260 e4a9a727f1583de9f30c0f185cf36148 361 Gene3D G3DSA:3.10.290.10 40 88 1.3E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS05260 e4a9a727f1583de9f30c0f185cf36148 361 Pfam PF01479 S4 domain 41 86 1.9E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS05260 e4a9a727f1583de9f30c0f185cf36148 361 SMART SM00363 40 105 2.6E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS05260 e4a9a727f1583de9f30c0f185cf36148 361 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 161 175 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05260 e4a9a727f1583de9f30c0f185cf36148 361 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 40 346 3.5E-85 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05260 e4a9a727f1583de9f30c0f185cf36148 361 PANTHER PTHR11079 1 358 1.4E-126 T 22-04-2016 PGJ_RS05260 e4a9a727f1583de9f30c0f185cf36148 361 SUPERFAMILY SSF55120 99 348 5.76E-69 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05260 e4a9a727f1583de9f30c0f185cf36148 361 SUPERFAMILY SSF55174 40 127 1.85E-14 T 22-04-2016 PGJ_RS05260 e4a9a727f1583de9f30c0f185cf36148 361 Pfam PF00849 RNA pseudouridylate synthase 115 273 8.9E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05260 e4a9a727f1583de9f30c0f185cf36148 361 PANTHER PTHR11079:SF73 1 358 1.4E-126 T 22-04-2016 PGJ_RS05345 f53d73f813b1716b6d43026885c2e65e 276 PANTHER PTHR10516 126 136 1.4E-39 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PGJ_RS05345 f53d73f813b1716b6d43026885c2e65e 276 PANTHER PTHR10516 156 272 1.4E-39 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PGJ_RS05345 f53d73f813b1716b6d43026885c2e65e 276 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 76 177 4.7E-16 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PGJ_RS05345 f53d73f813b1716b6d43026885c2e65e 276 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 187 269 7.7E-20 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PGJ_RS05345 f53d73f813b1716b6d43026885c2e65e 276 PANTHER PTHR10516:SF320 126 136 1.4E-39 T 22-04-2016 PGJ_RS05345 f53d73f813b1716b6d43026885c2e65e 276 PANTHER PTHR10516:SF320 156 272 1.4E-39 T 22-04-2016 PGJ_RS05345 f53d73f813b1716b6d43026885c2e65e 276 SUPERFAMILY SSF54534 74 272 3.93E-43 T 22-04-2016 PGJ_RS05345 f53d73f813b1716b6d43026885c2e65e 276 Gene3D G3DSA:3.10.50.40 158 275 1.5E-40 T 22-04-2016 PGJ_RS05345 f53d73f813b1716b6d43026885c2e65e 276 Gene3D G3DSA:1.10.287.460 76 157 2.8E-14 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PGJ_RS00150 269922ee6284e760ab4d2a566dc1789f 432 Pfam PF02646 RmuC family 111 415 6.7E-96 T 22-04-2016 IPR003798 DNA recombination RmuC PGJ_RS00150 269922ee6284e760ab4d2a566dc1789f 432 PANTHER PTHR30563 1 418 4.7E-75 T 22-04-2016 PGJ_RS00195 62f5bdf9dc3fb4b9a18ec1590f8049b0 284 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 240 266 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 PGJ_RS00195 62f5bdf9dc3fb4b9a18ec1590f8049b0 284 PANTHER PTHR13773:SF0 7 133 1.2E-53 T 22-04-2016 PGJ_RS00195 62f5bdf9dc3fb4b9a18ec1590f8049b0 284 PANTHER PTHR13773:SF0 149 282 1.2E-53 T 22-04-2016 PGJ_RS00195 62f5bdf9dc3fb4b9a18ec1590f8049b0 284 Pfam PF01148 Cytidylyltransferase family 8 282 4.3E-56 T 22-04-2016 PGJ_RS00195 62f5bdf9dc3fb4b9a18ec1590f8049b0 284 PANTHER PTHR13773 7 133 1.2E-53 T 22-04-2016 PGJ_RS00195 62f5bdf9dc3fb4b9a18ec1590f8049b0 284 PANTHER PTHR13773 149 282 1.2E-53 T 22-04-2016 PGJ_RS03260 4a3fc44084dedbbb2fa3fab16f60cfc1 316 PANTHER PTHR34220:SF1 61 316 1.8E-66 T 22-04-2016 PGJ_RS03260 4a3fc44084dedbbb2fa3fab16f60cfc1 316 Pfam PF06580 Histidine kinase 131 208 9.6E-20 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 PGJ_RS03260 4a3fc44084dedbbb2fa3fab16f60cfc1 316 PANTHER PTHR34220 61 316 1.8E-66 T 22-04-2016 PGJ_RS03260 4a3fc44084dedbbb2fa3fab16f60cfc1 316 SUPERFAMILY SSF55874 208 308 1.05E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS03260 4a3fc44084dedbbb2fa3fab16f60cfc1 316 Gene3D G3DSA:3.30.565.10 180 266 8.4E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS03815 cc25943e172e89caa575a356fdba4337 542 SUPERFAMILY SSF52402 382 526 2.17E-27 T 22-04-2016 PGJ_RS03815 cc25943e172e89caa575a356fdba4337 542 SUPERFAMILY SSF52402 162 333 2.17E-27 T 22-04-2016 PGJ_RS03815 cc25943e172e89caa575a356fdba4337 542 Pfam PF00733 Asparagine synthase 200 447 3.8E-12 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PGJ_RS03815 cc25943e172e89caa575a356fdba4337 542 Gene3D G3DSA:3.40.50.620 380 449 1.8E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS03815 cc25943e172e89caa575a356fdba4337 542 Gene3D G3DSA:3.40.50.620 168 331 1.8E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS03815 cc25943e172e89caa575a356fdba4337 542 Gene3D G3DSA:3.60.20.10 56 158 9.9E-10 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PGJ_RS03815 cc25943e172e89caa575a356fdba4337 542 SUPERFAMILY SSF56235 38 162 4.89E-21 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PGJ_RS07765 f10e86316dfaea88b746f8aea7417b27 71 Pfam PF13734 Spi protease inhibitor 28 69 1.2E-6 T 22-04-2016 IPR025896 Spi protease inhibitor PGJ_RS04105 f149016708014c84ef77e376e313f385 244 Pfam PF00005 ABC transporter 17 165 1.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS04105 f149016708014c84ef77e376e313f385 244 SUPERFAMILY SSF52540 1 225 6.05E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04105 f149016708014c84ef77e376e313f385 244 PANTHER PTHR24220:SF567 3 241 6.6E-108 T 22-04-2016 PGJ_RS04105 f149016708014c84ef77e376e313f385 244 Gene3D G3DSA:3.40.50.300 1 227 1.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04105 f149016708014c84ef77e376e313f385 244 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS04105 f149016708014c84ef77e376e313f385 244 SMART SM00382 26 215 8.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS04105 f149016708014c84ef77e376e313f385 244 PANTHER PTHR24220 3 241 6.6E-108 T 22-04-2016 PGJ_RS02355 79b0dacbd24003fe6eb4620d2494c1b1 621 Gene3D G3DSA:3.40.710.10 245 596 9.0E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS02355 79b0dacbd24003fe6eb4620d2494c1b1 621 SUPERFAMILY SSF56519 48 245 4.05E-40 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PGJ_RS02355 79b0dacbd24003fe6eb4620d2494c1b1 621 PANTHER PTHR30627:SF2 1 613 5.8E-165 T 22-04-2016 PGJ_RS02355 79b0dacbd24003fe6eb4620d2494c1b1 621 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 224 3.0E-37 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PGJ_RS02355 79b0dacbd24003fe6eb4620d2494c1b1 621 PANTHER PTHR30627 1 613 5.8E-165 T 22-04-2016 PGJ_RS02355 79b0dacbd24003fe6eb4620d2494c1b1 621 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 14 595 9.3E-140 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 PGJ_RS02355 79b0dacbd24003fe6eb4620d2494c1b1 621 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 587 2.7E-51 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PGJ_RS02355 79b0dacbd24003fe6eb4620d2494c1b1 621 Gene3D G3DSA:3.90.1310.10 125 244 8.1E-27 T 22-04-2016 PGJ_RS02355 79b0dacbd24003fe6eb4620d2494c1b1 621 SUPERFAMILY SSF56601 246 596 2.56E-79 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 Gene3D G3DSA:3.90.190.20 329 474 2.4E-50 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 480 5.5E-144 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 411 8.2E-19 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 Pfam PF08245 Mur ligase middle domain 109 303 3.4E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 SUPERFAMILY SSF53244 325 481 1.25E-45 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 PANTHER PTHR23135:SF4 10 487 2.8E-179 T 22-04-2016 PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 SUPERFAMILY SSF63418 7 99 1.31E-21 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 Gene3D G3DSA:3.40.1390.10 6 99 3.1E-24 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 480 33.272 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 SUPERFAMILY SSF53623 100 322 3.92E-68 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 PANTHER PTHR23135 10 487 2.8E-179 T 22-04-2016 PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 Pfam PF01225 Mur ligase family, catalytic domain 23 97 8.4E-10 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06165 44765eef8f99193addea26f7ce19df31 487 Gene3D G3DSA:3.40.1190.10 100 328 2.1E-69 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06625 4164402446543832c6990a2138f26113 396 Gene3D G3DSA:3.40.640.10 61 276 7.3E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS06625 4164402446543832c6990a2138f26113 396 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 393 51.498 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 PGJ_RS06625 4164402446543832c6990a2138f26113 396 Gene3D G3DSA:3.90.1150.10 277 391 1.4E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS06625 4164402446543832c6990a2138f26113 396 PANTHER PTHR13693 1 395 5.4E-262 T 22-04-2016 PGJ_RS06625 4164402446543832c6990a2138f26113 396 SUPERFAMILY SSF53383 7 394 1.26E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS06625 4164402446543832c6990a2138f26113 396 PANTHER PTHR13693:SF60 1 395 5.4E-262 T 22-04-2016 PGJ_RS06625 4164402446543832c6990a2138f26113 396 Pfam PF00155 Aminotransferase class I and II 43 384 2.6E-67 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PGJ_RS06625 4164402446543832c6990a2138f26113 396 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 395 1.4E-225 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 PGJ_RS01880 c032e7621db998ffef10ed8e515e98c0 511 PANTHER PTHR30619 14 508 2.1E-49 T 22-04-2016 PGJ_RS01880 c032e7621db998ffef10ed8e515e98c0 511 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 256 434 4.6E-19 T 22-04-2016 IPR004477 ComEC/Rec2-related protein PGJ_RS01880 c032e7621db998ffef10ed8e515e98c0 511 PANTHER PTHR30619:SF2 14 508 2.1E-49 T 22-04-2016 PGJ_RS01880 c032e7621db998ffef10ed8e515e98c0 511 Pfam PF03772 Competence protein 244 504 5.4E-49 T 22-04-2016 IPR004477 ComEC/Rec2-related protein PGJ_RS03930 12c3e12636edebe7940bf4b357cf1ccf 188 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 3 178 2.9E-46 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PGJ_RS03930 12c3e12636edebe7940bf4b357cf1ccf 188 Pfam PF01923 Cobalamin adenosyltransferase 2 166 1.5E-52 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PGJ_RS03930 12c3e12636edebe7940bf4b357cf1ccf 188 SUPERFAMILY SSF89028 1 179 2.94E-56 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PGJ_RS03930 12c3e12636edebe7940bf4b357cf1ccf 188 Gene3D G3DSA:1.20.1200.10 11 181 8.5E-56 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PGJ_RS03930 12c3e12636edebe7940bf4b357cf1ccf 188 PANTHER PTHR12213 1 182 6.9E-65 T 22-04-2016 PGJ_RS03930 12c3e12636edebe7940bf4b357cf1ccf 188 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 8 180 5.0E-97 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 SUPERFAMILY SSF52540 138 436 3.98E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 129 7.3E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 311 3.5E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 Hamap MF_00195 GTPase Der [der]. 2 437 37.086 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 435 1.8E-28 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 PANTHER PTHR11649:SF5 4 436 5.5E-131 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 Gene3D G3DSA:3.40.50.300 3 169 1.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 Gene3D G3DSA:3.40.50.300 173 360 7.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 PIRSF PIRSF006485 1 437 2.3E-165 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 PANTHER PTHR11649 4 436 5.5E-131 T 22-04-2016 PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 434 5.6E-167 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.4E-31 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 Pfam PF01926 50S ribosome-binding GTPase 178 296 2.2E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 Gene3D G3DSA:3.30.300.20 361 437 8.4E-31 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 8.4E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 8.4E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS09615 4bbc5addd1d11968147445305430c0f9 437 SUPERFAMILY SSF52540 1 172 8.06E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09760 52d10bf03c0152b06e8c41ac1369922d 319 Gene3D G3DSA:3.40.50.720 2 114 5.4E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09760 52d10bf03c0152b06e8c41ac1369922d 319 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 198 220 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PGJ_RS09760 52d10bf03c0152b06e8c41ac1369922d 319 PANTHER PTHR10996 1 319 3.3E-117 T 22-04-2016 PGJ_RS09760 52d10bf03c0152b06e8c41ac1369922d 319 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 22 319 8.8E-28 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PGJ_RS09760 52d10bf03c0152b06e8c41ac1369922d 319 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PGJ_RS09760 52d10bf03c0152b06e8c41ac1369922d 319 SUPERFAMILY SSF52283 1 128 2.65E-29 T 22-04-2016 PGJ_RS09760 52d10bf03c0152b06e8c41ac1369922d 319 Gene3D G3DSA:3.40.50.720 115 290 1.1E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS09760 52d10bf03c0152b06e8c41ac1369922d 319 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 2.2E-61 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PGJ_RS09760 52d10bf03c0152b06e8c41ac1369922d 319 SUPERFAMILY SSF51735 102 287 1.23E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 SMART SM01193 3 133 9.0E-96 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 Gene3D G3DSA:3.30.390.10 3 124 1.2E-56 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 Gene3D G3DSA:3.20.20.120 127 423 1.6E-131 T 22-04-2016 IPR029065 Enolase C-terminal domain-like PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 PRINTS PR00148 Enolase signature 337 351 6.07E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 PRINTS PR00148 Enolase signature 314 325 6.07E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 PRINTS PR00148 Enolase signature 160 173 6.07E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 PRINTS PR00148 Enolase signature 366 383 6.07E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 PRINTS PR00148 Enolase signature 36 50 6.07E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 PRINTS PR00148 Enolase signature 106 122 6.07E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 SUPERFAMILY SSF54826 1 136 2.36E-58 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 ProSitePatterns PS00164 Enolase signature. 337 350 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 PANTHER PTHR11902 1 415 2.3E-254 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 3 421 5.9E-204 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 PIRSF PIRSF001400 1 425 2.3E-185 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 Hamap MF_00318 Enolase [eno]. 1 414 43.313 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 422 1.3E-124 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 Pfam PF03952 Enolase, N-terminal domain 3 133 1.4E-61 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 SMART SM01192 138 423 4.0E-208 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PGJ_RS07920 da1ef42803070e62524f24959d1d95fd 425 SUPERFAMILY SSF51604 137 423 9.17E-124 T 22-04-2016 IPR029065 Enolase C-terminal domain-like PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 SMART SM00861 353 536 7.8E-46 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 PANTHER PTHR11624 346 674 4.9E-261 T 22-04-2016 IPR033247 Transketolase family PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 PANTHER PTHR11624 3 325 4.9E-261 T 22-04-2016 IPR033247 Transketolase family PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 SUPERFAMILY SSF52518 344 535 9.01E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 PANTHER PTHR11624:SF1 346 674 4.9E-261 T 22-04-2016 PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 PANTHER PTHR11624:SF1 3 325 4.9E-261 T 22-04-2016 PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 Gene3D G3DSA:3.40.50.920 551 674 2.0E-31 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 340 1.0E-89 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 Pfam PF02779 Transketolase, pyrimidine binding domain 354 533 6.9E-33 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 SUPERFAMILY SSF52518 2 327 1.47E-84 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 Gene3D G3DSA:3.40.50.970 328 542 9.2E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 Gene3D G3DSA:3.40.50.970 3 327 1.7E-96 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS07540 3cf24c8e20dfc093fa547be9151fb305 675 SUPERFAMILY SSF52922 549 674 3.85E-29 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PGJ_RS04000 11a168ceb758970ecd5d9e9f4877b317 197 Pfam PF13353 4Fe-4S single cluster domain 10 89 1.7E-7 T 22-04-2016 PGJ_RS04000 11a168ceb758970ecd5d9e9f4877b317 197 SUPERFAMILY SSF102114 21 99 5.62E-14 T 22-04-2016 PGJ_RS04000 11a168ceb758970ecd5d9e9f4877b317 197 Gene3D G3DSA:3.20.20.70 24 98 2.9E-14 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS04000 11a168ceb758970ecd5d9e9f4877b317 197 PIRSF PIRSF000370 1 197 7.5E-36 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 PGJ_RS04000 11a168ceb758970ecd5d9e9f4877b317 197 Pfam PF04055 Radical SAM superfamily 24 120 5.7E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS04000 11a168ceb758970ecd5d9e9f4877b317 197 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 197 32.583 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 PGJ_RS04000 11a168ceb758970ecd5d9e9f4877b317 197 PANTHER PTHR11228:SF6 1 112 3.4E-27 T 22-04-2016 PGJ_RS04000 11a168ceb758970ecd5d9e9f4877b317 197 PANTHER PTHR11228 1 112 3.4E-27 T 22-04-2016 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 5.1E-39 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 PANTHER PTHR11404:SF8 1 191 1.9E-92 T 22-04-2016 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 PIRSF PIRSF000349 1 191 2.9E-75 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.2E-18 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 2.2E-18 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 2.2E-18 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.2E-18 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 2.2E-18 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 PANTHER PTHR11404 1 191 1.9E-92 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 81 3.6E-30 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 SUPERFAMILY SSF54719 82 191 1.7E-42 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 Gene3D G3DSA:1.10.287.990 20 79 1.2E-19 T 22-04-2016 PGJ_RS02135 6e60f8ff20d5bed00d6f680be86ef7d2 191 SUPERFAMILY SSF46609 1 83 1.83E-28 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PGJ_RS01655 5f593a87e316619686624ae190f5f289 233 SUPERFAMILY SSF52540 2 219 5.42E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01655 5f593a87e316619686624ae190f5f289 233 PANTHER PTHR24220 3 220 1.6E-59 T 22-04-2016 PGJ_RS01655 5f593a87e316619686624ae190f5f289 233 SMART SM00382 26 210 4.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS01655 5f593a87e316619686624ae190f5f289 233 Gene3D G3DSA:3.40.50.300 1 220 1.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01655 5f593a87e316619686624ae190f5f289 233 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS01655 5f593a87e316619686624ae190f5f289 233 Pfam PF00005 ABC transporter 21 160 4.8E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS05505 937c6f5670497736671e2e29275b4cce 197 PANTHER PTHR32154 1 194 3.9E-53 T 22-04-2016 PGJ_RS05505 937c6f5670497736671e2e29275b4cce 197 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 188 6.6E-35 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PGJ_RS05505 937c6f5670497736671e2e29275b4cce 197 PANTHER PTHR32154:SF22 1 194 3.9E-53 T 22-04-2016 PGJ_RS05505 937c6f5670497736671e2e29275b4cce 197 Gene3D G3DSA:3.40.920.10 1 190 1.1E-38 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PGJ_RS05505 937c6f5670497736671e2e29275b4cce 197 SUPERFAMILY SSF53323 2 192 6.02E-45 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PGJ_RS05110 96e63e0e810eb44e6cc8ef54892d8518 361 PANTHER PTHR35604 203 359 2.7E-29 T 22-04-2016 PGJ_RS05110 96e63e0e810eb44e6cc8ef54892d8518 361 PANTHER PTHR35604 12 177 2.7E-29 T 22-04-2016 PGJ_RS05110 96e63e0e810eb44e6cc8ef54892d8518 361 Pfam PF01609 Transposase DDE domain 143 348 3.8E-48 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS05110 96e63e0e810eb44e6cc8ef54892d8518 361 Pfam PF05598 Transposase domain (DUF772) 59 133 1.2E-21 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS05970 919e4aa9d4e5c406f655f7a7303e8bba 193 Gene3D G3DSA:3.30.1130.10 63 190 3.7E-62 T 22-04-2016 PGJ_RS05970 919e4aa9d4e5c406f655f7a7303e8bba 193 Gene3D G3DSA:1.10.286.10 12 59 1.0E-21 T 22-04-2016 PGJ_RS05970 919e4aa9d4e5c406f655f7a7303e8bba 193 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 14 190 8.3E-77 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PGJ_RS05970 919e4aa9d4e5c406f655f7a7303e8bba 193 SUPERFAMILY SSF55620 3 190 1.11E-78 T 22-04-2016 PGJ_RS05970 919e4aa9d4e5c406f655f7a7303e8bba 193 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 118 128 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PGJ_RS05970 919e4aa9d4e5c406f655f7a7303e8bba 193 Pfam PF01227 GTP cyclohydrolase I 14 189 2.9E-76 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PGJ_RS05970 919e4aa9d4e5c406f655f7a7303e8bba 193 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 9 190 37.726 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PGJ_RS05970 919e4aa9d4e5c406f655f7a7303e8bba 193 PANTHER PTHR11109 1 192 2.8E-111 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PGJ_RS05970 919e4aa9d4e5c406f655f7a7303e8bba 193 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 70 86 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PGJ_RS03215 bacc90de722b7794ea0552761cac16cc 367 SUPERFAMILY SSF53822 37 365 2.02E-54 T 22-04-2016 IPR028082 Periplasmic binding protein-like I PGJ_RS03215 bacc90de722b7794ea0552761cac16cc 367 Gene3D G3DSA:3.40.50.2300 296 347 4.1E-34 T 22-04-2016 PGJ_RS03215 bacc90de722b7794ea0552761cac16cc 367 Gene3D G3DSA:3.40.50.2300 35 152 4.1E-34 T 22-04-2016 PGJ_RS03215 bacc90de722b7794ea0552761cac16cc 367 Gene3D G3DSA:3.40.50.2300 195 295 2.5E-12 T 22-04-2016 PGJ_RS03215 bacc90de722b7794ea0552761cac16cc 367 PANTHER PTHR30483:SF6 4 366 5.8E-41 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PGJ_RS03215 bacc90de722b7794ea0552761cac16cc 367 Pfam PF13458 Periplasmic binding protein 39 360 2.4E-38 T 22-04-2016 IPR028081 Leucine-binding protein domain PGJ_RS03215 bacc90de722b7794ea0552761cac16cc 367 PANTHER PTHR30483 4 366 5.8E-41 T 22-04-2016 PGJ_RS03085 978df52c4d8344d0a0be9ab087b3dc44 221 PANTHER PTHR11071:SF78 171 221 1.1E-27 T 22-04-2016 PGJ_RS03085 978df52c4d8344d0a0be9ab087b3dc44 221 PANTHER PTHR11071:SF78 23 139 1.1E-27 T 22-04-2016 PGJ_RS03085 978df52c4d8344d0a0be9ab087b3dc44 221 SUPERFAMILY SSF50891 170 218 1.21E-37 T 22-04-2016 IPR029000 Cyclophilin-like domain PGJ_RS03085 978df52c4d8344d0a0be9ab087b3dc44 221 SUPERFAMILY SSF50891 13 138 1.21E-37 T 22-04-2016 IPR029000 Cyclophilin-like domain PGJ_RS03085 978df52c4d8344d0a0be9ab087b3dc44 221 Gene3D G3DSA:2.40.100.10 172 220 9.5E-46 T 22-04-2016 IPR029000 Cyclophilin-like domain PGJ_RS03085 978df52c4d8344d0a0be9ab087b3dc44 221 Gene3D G3DSA:2.40.100.10 9 140 9.5E-46 T 22-04-2016 IPR029000 Cyclophilin-like domain PGJ_RS03085 978df52c4d8344d0a0be9ab087b3dc44 221 PANTHER PTHR11071 171 221 1.1E-27 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PGJ_RS03085 978df52c4d8344d0a0be9ab087b3dc44 221 PANTHER PTHR11071 23 139 1.1E-27 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PGJ_RS03085 978df52c4d8344d0a0be9ab087b3dc44 221 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 28 218 4.7E-40 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PGJ_RS07350 d24d9bf7a19aa02e0b7fe11e607e02c9 886 Pfam PF08713 DNA alkylation repair enzyme 673 783 3.2E-4 T 22-04-2016 IPR014825 DNA alkylation repair enzyme PGJ_RS07350 d24d9bf7a19aa02e0b7fe11e607e02c9 886 PANTHER PTHR23422 14 670 2.8E-183 T 22-04-2016 PGJ_RS07350 d24d9bf7a19aa02e0b7fe11e607e02c9 886 PANTHER PTHR23422:SF12 14 670 2.8E-183 T 22-04-2016 PGJ_RS07350 d24d9bf7a19aa02e0b7fe11e607e02c9 886 SUPERFAMILY SSF48371 663 837 3.17E-22 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 PGJ_RS07350 d24d9bf7a19aa02e0b7fe11e607e02c9 886 Pfam PF03571 Peptidase family M49 450 588 2.0E-8 T 22-04-2016 PGJ_RS07350 d24d9bf7a19aa02e0b7fe11e607e02c9 886 Pfam PF03571 Peptidase family M49 216 443 1.3E-35 T 22-04-2016 PGJ_RS07475 b942f889e7433014078fdf834c67fa63 516 TIGRFAM TIGR03517 GldM_gliding: gliding motility-associated protein GldM 4 514 5.5E-211 T 22-04-2016 IPR019859 Gliding motility-associated protein GldM PGJ_RS07475 b942f889e7433014078fdf834c67fa63 516 Pfam PF12080 GldM C-terminal domain 320 501 5.1E-53 T 22-04-2016 IPR022719 Gliding motility-associated protein GldM, C-terminal PGJ_RS07475 b942f889e7433014078fdf834c67fa63 516 Pfam PF12081 GldM N-terminal domain 33 216 6.0E-52 T 22-04-2016 IPR022720 Gliding motility-associated protein GldM, N-terminal PGJ_RS03525 b474f93cafd1a1604757a5c745640079 347 Gene3D G3DSA:3.90.180.10 25 198 7.2E-9 T 22-04-2016 IPR011032 GroES-like PGJ_RS03525 b474f93cafd1a1604757a5c745640079 347 SUPERFAMILY SSF50129 27 196 3.61E-7 T 22-04-2016 IPR011032 GroES-like PGJ_RS03525 b474f93cafd1a1604757a5c745640079 347 Pfam PF00107 Zinc-binding dehydrogenase 209 296 2.8E-7 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PGJ_RS03525 b474f93cafd1a1604757a5c745640079 347 SUPERFAMILY SSF51735 183 312 9.86E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03525 b474f93cafd1a1604757a5c745640079 347 Gene3D G3DSA:3.40.50.720 199 297 2.5E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS00305 608522a14d1cab044603ff6c44de7161 349 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 223 256 2.2E-5 T 22-04-2016 IPR001451 Hexapeptide repeat PGJ_RS00305 608522a14d1cab044603ff6c44de7161 349 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 147 180 5.7E-7 T 22-04-2016 IPR001451 Hexapeptide repeat PGJ_RS00305 608522a14d1cab044603ff6c44de7161 349 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 112 144 7.8E-4 T 22-04-2016 IPR001451 Hexapeptide repeat PGJ_RS00305 608522a14d1cab044603ff6c44de7161 349 Gene3D G3DSA:2.160.10.10 117 309 2.8E-44 T 22-04-2016 PGJ_RS00305 608522a14d1cab044603ff6c44de7161 349 SUPERFAMILY SSF51161 35 315 6.32E-73 T 22-04-2016 IPR011004 Trimeric LpxA-like PGJ_RS00305 608522a14d1cab044603ff6c44de7161 349 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 4 326 34.695 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 PGJ_RS00305 608522a14d1cab044603ff6c44de7161 349 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 90 1.5E-18 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 PGJ_RS00305 608522a14d1cab044603ff6c44de7161 349 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 329 3.6E-104 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 PGJ_RS00305 608522a14d1cab044603ff6c44de7161 349 PANTHER PTHR22572 100 296 3.1E-53 T 22-04-2016 PGJ_RS00305 608522a14d1cab044603ff6c44de7161 349 PANTHER PTHR22572:SF117 100 296 3.1E-53 T 22-04-2016 PGJ_RS07225 1553a258e152450b0d9ef77e582cba88 201 Pfam PF01926 50S ribosome-binding GTPase 26 143 2.5E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS07225 1553a258e152450b0d9ef77e582cba88 201 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 191 2.0E-66 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 PGJ_RS07225 1553a258e152450b0d9ef77e582cba88 201 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 195 24.585 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 PGJ_RS07225 1553a258e152450b0d9ef77e582cba88 201 SUPERFAMILY SSF52540 14 194 5.4E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07225 1553a258e152450b0d9ef77e582cba88 201 Gene3D G3DSA:3.40.50.300 4 194 2.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07225 1553a258e152450b0d9ef77e582cba88 201 PANTHER PTHR11649 1 194 7.6E-61 T 22-04-2016 PGJ_RS05490 233dde524d3d5606f9db53a0ba008312 397 PANTHER PTHR12286:SF6 1 397 5.8E-177 T 22-04-2016 PGJ_RS05490 233dde524d3d5606f9db53a0ba008312 397 SUPERFAMILY SSF51735 3 187 1.77E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS05490 233dde524d3d5606f9db53a0ba008312 397 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 134 1.8E-36 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 PGJ_RS05490 233dde524d3d5606f9db53a0ba008312 397 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 138 385 5.6E-37 T 22-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal PGJ_RS05490 233dde524d3d5606f9db53a0ba008312 397 PANTHER PTHR12286 1 397 5.8E-177 T 22-04-2016 PGJ_RS05490 233dde524d3d5606f9db53a0ba008312 397 Gene3D G3DSA:3.40.50.720 3 187 2.7E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS08685 6684df4e0738c701dd336c927c31e8c1 330 PANTHER PTHR30106 16 330 2.0E-114 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PGJ_RS08685 6684df4e0738c701dd336c927c31e8c1 330 PANTHER PTHR30106:SF1 16 330 2.0E-114 T 22-04-2016 PGJ_RS08685 6684df4e0738c701dd336c927c31e8c1 330 Pfam PF03601 Conserved hypothetical protein 698 17 310 2.8E-59 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PGJ_RS02615 97fde1431c06d5d703193417b4d2a85f 662 SUPERFAMILY SSF52467 311 477 6.54E-62 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS02615 97fde1431c06d5d703193417b4d2a85f 662 PANTHER PTHR10160 5 482 6.6E-148 T 22-04-2016 PGJ_RS02615 97fde1431c06d5d703193417b4d2a85f 662 Gene3D G3DSA:3.40.50.1220 308 478 1.3E-74 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS02615 97fde1431c06d5d703193417b4d2a85f 662 Gene3D G3DSA:3.40.50.1220 493 660 3.2E-74 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS02615 97fde1431c06d5d703193417b4d2a85f 662 PANTHER PTHR10160:SF24 5 482 6.6E-148 T 22-04-2016 PGJ_RS02615 97fde1431c06d5d703193417b4d2a85f 662 SUPERFAMILY SSF52467 495 659 2.27E-61 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS02615 97fde1431c06d5d703193417b4d2a85f 662 Pfam PF02233 NAD(P) transhydrogenase beta subunit 8 474 8.8E-155 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 PGJ_RS02615 97fde1431c06d5d703193417b4d2a85f 662 Pfam PF02233 NAD(P) transhydrogenase beta subunit 485 657 2.1E-79 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 PGJ_RS00725 b51f4da57dd54e21f224b59dadaef01f 161 Gene3D G3DSA:1.10.10.10 6 51 8.7E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS00725 b51f4da57dd54e21f224b59dadaef01f 161 Hamap MF_01114 Regulatory protein RecX [recX]. 2 156 11.847 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 PGJ_RS00725 b51f4da57dd54e21f224b59dadaef01f 161 PANTHER PTHR33602 1 147 3.3E-23 T 22-04-2016 PGJ_RS00725 b51f4da57dd54e21f224b59dadaef01f 161 Pfam PF02631 RecX family 29 147 1.7E-23 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 PGJ_RS00725 b51f4da57dd54e21f224b59dadaef01f 161 Gene3D G3DSA:1.10.10.10 53 96 2.0E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06430 eed556b285c4f388e3d9af354053ce05 531 Gene3D G3DSA:3.40.720.10 250 321 5.9E-20 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PGJ_RS06430 eed556b285c4f388e3d9af354053ce05 531 Gene3D G3DSA:3.40.720.10 14 206 5.9E-20 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PGJ_RS06430 eed556b285c4f388e3d9af354053ce05 531 SUPERFAMILY SSF53649 22 226 4.16E-36 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PGJ_RS06430 eed556b285c4f388e3d9af354053ce05 531 SUPERFAMILY SSF53649 255 513 4.16E-36 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PGJ_RS06430 eed556b285c4f388e3d9af354053ce05 531 PIRSF PIRSF031924 7 530 8.1E-99 T 22-04-2016 IPR026263 Alkaline phosphatase, prokaryotic KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PGJ_RS06430 eed556b285c4f388e3d9af354053ce05 531 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 35 459 1.2E-20 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 PGJ_RS04875 1c3f44685668cd22bc70cc8b4c90046f 407 SUPERFAMILY SSF56349 110 389 1.24E-40 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS04875 1c3f44685668cd22bc70cc8b4c90046f 407 PANTHER PTHR30349 40 398 6.6E-87 T 22-04-2016 PGJ_RS04875 1c3f44685668cd22bc70cc8b4c90046f 407 Gene3D G3DSA:1.10.443.10 222 396 4.2E-32 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS04875 1c3f44685668cd22bc70cc8b4c90046f 407 Pfam PF00589 Phage integrase family 249 383 2.8E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS04875 1c3f44685668cd22bc70cc8b4c90046f 407 PANTHER PTHR30349:SF26 40 398 6.6E-87 T 22-04-2016 PGJ_RS04875 1c3f44685668cd22bc70cc8b4c90046f 407 Pfam PF13102 Phage integrase SAM-like domain 9 174 3.1E-18 T 22-04-2016 IPR025269 Phage integrase SAM-like domain PGJ_RS05875 6a4bd7d6fc2b72b308da7052d83c9cfe 387 PANTHER PTHR35336:SF2 23 268 1.2E-14 T 22-04-2016 PGJ_RS05875 6a4bd7d6fc2b72b308da7052d83c9cfe 387 Pfam PF01955 Adenosylcobinamide amidohydrolase 33 243 1.3E-55 T 22-04-2016 IPR002808 Adenosylcobinamide amidohydrolase, CbiZ PGJ_RS05875 6a4bd7d6fc2b72b308da7052d83c9cfe 387 PANTHER PTHR35336 23 268 1.2E-14 T 22-04-2016 PGJ_RS03435 e520bdc7b62ffaa4a67ef21bdf048ca7 199 PANTHER PTHR30055:SF27 4 139 7.2E-15 T 22-04-2016 PGJ_RS03435 e520bdc7b62ffaa4a67ef21bdf048ca7 199 PANTHER PTHR30055 4 139 7.2E-15 T 22-04-2016 PGJ_RS03435 e520bdc7b62ffaa4a67ef21bdf048ca7 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.3E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PGJ_RS03435 e520bdc7b62ffaa4a67ef21bdf048ca7 199 SUPERFAMILY SSF46689 3 68 4.17E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS03435 e520bdc7b62ffaa4a67ef21bdf048ca7 199 Gene3D G3DSA:1.10.357.10 2 195 9.2E-23 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PGJ_RS03435 e520bdc7b62ffaa4a67ef21bdf048ca7 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PGJ_RS03435 e520bdc7b62ffaa4a67ef21bdf048ca7 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PGJ_RS06855 3042ab10cda1c2c8f9100f9a24309f32 350 Pfam PF15869 TolB-like 6-blade propeller-like 54 326 2.6E-10 T 22-04-2016 PGJ_RS06855 3042ab10cda1c2c8f9100f9a24309f32 350 SUPERFAMILY SSF50969 109 350 5.49E-8 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PGJ_RS06855 3042ab10cda1c2c8f9100f9a24309f32 350 Gene3D G3DSA:2.130.10.10 270 349 2.5E-5 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PGJ_RS06855 3042ab10cda1c2c8f9100f9a24309f32 350 Gene3D G3DSA:2.130.10.10 111 134 2.5E-5 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PGJ_RS09135 a26f994637e3534b8a7be7bab5f543e4 364 Gene3D G3DSA:3.40.1390.30 1 113 3.4E-42 T 22-04-2016 PGJ_RS09135 a26f994637e3534b8a7be7bab5f543e4 364 Gene3D G3DSA:3.30.70.830 131 234 2.5E-34 T 22-04-2016 PGJ_RS09135 a26f994637e3534b8a7be7bab5f543e4 364 SUPERFAMILY SSF102705 1 363 3.01E-108 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PGJ_RS09135 a26f994637e3534b8a7be7bab5f543e4 364 PANTHER PTHR13799 155 364 4.7E-90 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PGJ_RS09135 a26f994637e3534b8a7be7bab5f543e4 364 PANTHER PTHR13799 1 133 4.7E-90 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PGJ_RS09135 a26f994637e3534b8a7be7bab5f543e4 364 Gene3D G3DSA:3.40.1390.30 114 129 1.2E-29 T 22-04-2016 PGJ_RS09135 a26f994637e3534b8a7be7bab5f543e4 364 Gene3D G3DSA:3.40.1390.30 236 322 1.2E-29 T 22-04-2016 PGJ_RS09135 a26f994637e3534b8a7be7bab5f543e4 364 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 346 3.2E-49 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PGJ_RS09135 a26f994637e3534b8a7be7bab5f543e4 364 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 347 1.3E-71 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PGJ_RS09135 a26f994637e3534b8a7be7bab5f543e4 364 PIRSF PIRSF037489 1 364 3.3E-127 T 22-04-2016 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria PGJ_RS07395 0ae2721bf4685dc71ff2de4d3c5003a7 190 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 1 190 25.052 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 PGJ_RS07395 0ae2721bf4685dc71ff2de4d3c5003a7 190 PANTHER PTHR30335 1 190 1.1E-103 T 22-04-2016 PGJ_RS07395 0ae2721bf4685dc71ff2de4d3c5003a7 190 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 189 9.9E-62 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PGJ_RS07395 0ae2721bf4685dc71ff2de4d3c5003a7 190 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 1 189 1.9E-88 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 PGJ_RS07395 0ae2721bf4685dc71ff2de4d3c5003a7 190 PANTHER PTHR30335:SF0 1 190 1.1E-103 T 22-04-2016 PGJ_RS07395 0ae2721bf4685dc71ff2de4d3c5003a7 190 PIRSF PIRSF006102 1 190 4.5E-59 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PGJ_RS07950 6170f203cf7c371cfdf61a98ce684fac 262 PANTHER PTHR32552:SF23 14 221 2.3E-38 T 22-04-2016 PGJ_RS07950 6170f203cf7c371cfdf61a98ce684fac 262 Gene3D G3DSA:3.30.420.10 57 219 1.2E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS07950 6170f203cf7c371cfdf61a98ce684fac 262 SUPERFAMILY SSF53098 57 223 1.82E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS07950 6170f203cf7c371cfdf61a98ce684fac 262 PANTHER PTHR32552 14 221 2.3E-38 T 22-04-2016 PGJ_RS07950 6170f203cf7c371cfdf61a98ce684fac 262 Pfam PF00665 Integrase core domain 62 181 1.4E-22 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 PANTHER PTHR10909:SF186 378 470 2.8E-162 T 22-04-2016 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 PANTHER PTHR10909:SF186 27 358 2.8E-162 T 22-04-2016 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 Gene3D G3DSA:1.10.540.10 33 170 9.5E-22 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 SUPERFAMILY SSF158494 443 563 4.18E-45 T 22-04-2016 IPR020964 Acyl-CoA dehydrogenase, C-terminal PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 SUPERFAMILY SSF47203 283 452 4.35E-38 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 173 268 8.2E-28 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 SUPERFAMILY SSF56645 49 270 6.15E-47 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 PANTHER PTHR10909 378 470 2.8E-162 T 22-04-2016 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 PANTHER PTHR10909 27 358 2.8E-162 T 22-04-2016 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 Gene3D G3DSA:1.20.140.10 265 447 1.2E-46 T 22-04-2016 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 Gene3D G3DSA:2.40.110.10 172 264 2.6E-25 T 22-04-2016 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 54 169 6.7E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 444 1.4E-28 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 Pfam PF12186 Acyl-CoA dehydrogenase C terminal 452 563 2.4E-38 T 22-04-2016 IPR020964 Acyl-CoA dehydrogenase, C-terminal PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 Gene3D G3DSA:1.20.120.470 448 570 1.3E-48 T 22-04-2016 IPR020964 Acyl-CoA dehydrogenase, C-terminal PGJ_RS05070 0edea16439a57dd3bd43cfedaf4e0f4f 573 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 410 429 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PGJ_RS04440 595c1d1250ba7bfe20f08f514b7c88e1 258 Gene3D G3DSA:3.40.50.1580 3 247 5.6E-62 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PGJ_RS04440 595c1d1250ba7bfe20f08f514b7c88e1 258 PANTHER PTHR21234:SF11 60 255 2.2E-58 T 22-04-2016 PGJ_RS04440 595c1d1250ba7bfe20f08f514b7c88e1 258 PANTHER PTHR21234 60 255 2.2E-58 T 22-04-2016 IPR018017 Nucleoside phosphorylase PGJ_RS04440 595c1d1250ba7bfe20f08f514b7c88e1 258 TIGRFAM TIGR01721 AMN-like: putative AMP nucleosidase 2 258 2.1E-138 T 22-04-2016 IPR010944 AMP nucleosidase, putative PGJ_RS04440 595c1d1250ba7bfe20f08f514b7c88e1 258 SUPERFAMILY SSF53167 4 249 8.77E-61 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PGJ_RS04440 595c1d1250ba7bfe20f08f514b7c88e1 258 Pfam PF01048 Phosphorylase superfamily 44 213 2.9E-24 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PGJ_RS05430 c900ad24a1f02f83e4b905c8822d01ee 431 PANTHER PTHR21432 1 430 1.9E-190 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PGJ_RS05430 c900ad24a1f02f83e4b905c8822d01ee 431 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 6 181 7.9E-33 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PGJ_RS05430 c900ad24a1f02f83e4b905c8822d01ee 431 Gene3D G3DSA:3.40.810.20 190 428 8.4E-53 T 22-04-2016 PGJ_RS05430 c900ad24a1f02f83e4b905c8822d01ee 431 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 273 425 1.0E-69 T 22-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PGJ_RS05430 c900ad24a1f02f83e4b905c8822d01ee 431 SUPERFAMILY SSF100950 5 223 7.78E-51 T 22-04-2016 PGJ_RS05430 c900ad24a1f02f83e4b905c8822d01ee 431 PANTHER PTHR21432:SF18 1 430 1.9E-190 T 22-04-2016 PGJ_RS05430 c900ad24a1f02f83e4b905c8822d01ee 431 Gene3D G3DSA:3.40.1080.10 7 184 5.0E-65 T 22-04-2016 PGJ_RS05430 c900ad24a1f02f83e4b905c8822d01ee 431 SUPERFAMILY SSF100950 191 428 8.38E-72 T 22-04-2016 PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 Gene3D G3DSA:3.90.25.10 342 355 4.4E-7 T 22-04-2016 PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 Gene3D G3DSA:3.90.25.10 234 258 4.4E-7 T 22-04-2016 PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 356 46.424 T 22-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 PANTHER PTHR10366 6 191 6.1E-112 T 22-04-2016 PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 PANTHER PTHR10366 235 355 6.1E-112 T 22-04-2016 PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 Gene3D G3DSA:3.40.50.720 2 169 1.0E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 Gene3D G3DSA:3.40.50.720 259 300 1.0E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 SUPERFAMILY SSF51735 2 191 3.24E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 SUPERFAMILY SSF51735 234 356 3.24E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 288 3.3E-78 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 Gene3D G3DSA:3.90.25.10 170 199 3.4E-34 T 22-04-2016 PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 Gene3D G3DSA:3.90.25.10 301 341 3.4E-34 T 22-04-2016 PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 PANTHER PTHR10366:SF259 6 191 6.1E-112 T 22-04-2016 PGJ_RS02810 91cfb740d1dcb16854a4afdfa5f2e4e0 357 PANTHER PTHR10366:SF259 235 355 6.1E-112 T 22-04-2016 PGJ_RS07625 1d0f8e5e2ebf7dbde80d5e8a6d8b81d3 346 SUPERFAMILY SSF52833 220 343 1.02E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS07625 1d0f8e5e2ebf7dbde80d5e8a6d8b81d3 346 Pfam PF00578 AhpC/TSA family 222 338 5.4E-7 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PGJ_RS07625 1d0f8e5e2ebf7dbde80d5e8a6d8b81d3 346 Gene3D G3DSA:3.40.30.10 219 343 3.2E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 10 493 2.4E-166 T 22-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 Gene3D G3DSA:3.30.930.10 6 297 7.1E-110 T 22-04-2016 PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 Gene3D G3DSA:3.30.110.30 421 492 1.2E-32 T 22-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 SMART SM00946 427 493 3.7E-33 T 22-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 PANTHER PTHR11451:SF6 12 467 1.2E-239 T 22-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 427 493 6.6E-24 T 22-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 Gene3D G3DSA:3.40.50.800 298 417 4.0E-42 T 22-04-2016 IPR004154 Anticodon-binding PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 Pfam PF03129 Anticodon binding domain 304 399 1.1E-18 T 22-04-2016 IPR004154 Anticodon-binding PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 Hamap MF_01571 Proline--tRNA ligase [proS]. 8 493 44.559 T 22-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 117 285 4.9E-19 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 SUPERFAMILY SSF64586 421 493 3.34E-23 T 22-04-2016 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 PANTHER PTHR11451 12 467 1.2E-239 T 22-04-2016 PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 SUPERFAMILY SSF52954 292 420 2.72E-35 T 22-04-2016 IPR004154 Anticodon-binding PGJ_RS04370 c31cfd0806e6dc79a9b5f1edc8343bca 493 SUPERFAMILY SSF55681 13 291 5.97E-75 T 22-04-2016 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 Gene3D G3DSA:3.90.640.10 184 257 2.4E-22 T 22-04-2016 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 Gene3D G3DSA:3.30.420.40 157 183 2.2E-32 T 22-04-2016 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 Gene3D G3DSA:3.30.420.40 262 316 2.2E-32 T 22-04-2016 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 SUPERFAMILY SSF53067 150 335 1.83E-47 T 22-04-2016 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 SUPERFAMILY SSF53067 8 145 2.68E-29 T 22-04-2016 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 Gene3D G3DSA:3.30.420.40 7 156 1.1E-34 T 22-04-2016 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 PANTHER PTHR19375:SF117 6 326 8.0E-141 T 22-04-2016 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 Pfam PF06723 MreB/Mbl protein 8 333 2.6E-119 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 8.73E-40 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 8.73E-40 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 8.73E-40 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 299 325 8.73E-40 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 8.73E-40 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 334 1.6E-118 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PGJ_RS02340 06d65c481eef47b58f9036c84cbade7b 339 PANTHER PTHR19375 6 326 8.0E-141 T 22-04-2016 PGJ_RS04075 31a3bca7c29f2e82176b5474347d8b1c 154 SUPERFAMILY SSF46785 3 68 1.42E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS04075 31a3bca7c29f2e82176b5474347d8b1c 154 PANTHER PTHR34471:SF1 1 153 5.7E-24 T 22-04-2016 PGJ_RS04075 31a3bca7c29f2e82176b5474347d8b1c 154 Gene3D G3DSA:1.10.10.10 8 65 1.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS04075 31a3bca7c29f2e82176b5474347d8b1c 154 PANTHER PTHR34471 1 153 5.7E-24 T 22-04-2016 PGJ_RS04075 31a3bca7c29f2e82176b5474347d8b1c 154 Pfam PF01316 Arginine repressor, DNA binding domain 2 67 3.7E-17 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 PGJ_RS04075 31a3bca7c29f2e82176b5474347d8b1c 154 Hamap MF_00173 Arginine repressor [argR]. 1 152 32.507 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 PGJ_RS04075 31a3bca7c29f2e82176b5474347d8b1c 154 PRINTS PR01467 Bacterial arginine repressor signature 36 51 2.2E-6 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 PGJ_RS04075 31a3bca7c29f2e82176b5474347d8b1c 154 PRINTS PR01467 Bacterial arginine repressor signature 20 33 2.2E-6 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 PGJ_RS04075 31a3bca7c29f2e82176b5474347d8b1c 154 PRINTS PR01467 Bacterial arginine repressor signature 88 101 2.2E-6 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 PGJ_RS00030 f59180d6983e87887fb508ab086709a7 459 Pfam PF01554 MatE 276 407 6.9E-21 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS00030 f59180d6983e87887fb508ab086709a7 459 Pfam PF01554 MatE 24 185 7.0E-28 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS00030 f59180d6983e87887fb508ab086709a7 459 PANTHER PTHR11206:SF132 9 447 8.1E-142 T 22-04-2016 PGJ_RS00030 f59180d6983e87887fb508ab086709a7 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 424 4.5E-53 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS00030 f59180d6983e87887fb508ab086709a7 459 PIRSF PIRSF006603 1 458 4.6E-83 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS00030 f59180d6983e87887fb508ab086709a7 459 PANTHER PTHR11206 9 447 8.1E-142 T 22-04-2016 PGJ_RS06780 485a607e249c9b3a7dce7d6d67ea34e6 876 Gene3D G3DSA:2.40.170.20 742 872 4.2E-8 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS06780 485a607e249c9b3a7dce7d6d67ea34e6 876 Pfam PF13715 CarboxypepD_reg-like domain 33 119 3.7E-8 T 22-04-2016 PGJ_RS06780 485a607e249c9b3a7dce7d6d67ea34e6 876 SUPERFAMILY SSF56935 116 436 1.21E-18 T 22-04-2016 PGJ_RS06780 485a607e249c9b3a7dce7d6d67ea34e6 876 SUPERFAMILY SSF56935 741 872 1.21E-18 T 22-04-2016 PGJ_RS06780 485a607e249c9b3a7dce7d6d67ea34e6 876 SUPERFAMILY SSF56935 477 672 1.21E-18 T 22-04-2016 PGJ_RS06780 485a607e249c9b3a7dce7d6d67ea34e6 876 SUPERFAMILY SSF49464 33 117 1.41E-7 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS06780 485a607e249c9b3a7dce7d6d67ea34e6 876 Gene3D G3DSA:2.60.40.1120 32 122 1.7E-7 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS06780 485a607e249c9b3a7dce7d6d67ea34e6 876 Pfam PF00593 TonB dependent receptor 594 868 1.4E-5 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS01665 08f50eaf7cae3970371d6a09525da24b 420 Pfam PF13439 Glycosyltransferase Family 4 132 227 1.4E-17 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PGJ_RS01665 08f50eaf7cae3970371d6a09525da24b 420 Pfam PF00534 Glycosyl transferases group 1 243 386 3.7E-32 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 PGJ_RS01665 08f50eaf7cae3970371d6a09525da24b 420 PANTHER PTHR12526 79 420 1.7E-60 T 22-04-2016 PGJ_RS01665 08f50eaf7cae3970371d6a09525da24b 420 SUPERFAMILY SSF53756 1 417 8.72E-82 T 22-04-2016 PGJ_RS01665 08f50eaf7cae3970371d6a09525da24b 420 Gene3D G3DSA:3.40.50.2000 210 391 2.2E-35 T 22-04-2016 PGJ_RS01700 21ae679f2921c5766b194e159738d548 218 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS01700 21ae679f2921c5766b194e159738d548 218 PANTHER PTHR24220:SF111 3 218 1.7E-98 T 22-04-2016 PGJ_RS01700 21ae679f2921c5766b194e159738d548 218 SUPERFAMILY SSF52540 1 216 1.36E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01700 21ae679f2921c5766b194e159738d548 218 Pfam PF00005 ABC transporter 17 165 3.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS01700 21ae679f2921c5766b194e159738d548 218 SMART SM00382 26 214 5.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS01700 21ae679f2921c5766b194e159738d548 218 Gene3D G3DSA:3.40.50.300 1 214 3.8E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01700 21ae679f2921c5766b194e159738d548 218 PANTHER PTHR24220 3 218 1.7E-98 T 22-04-2016 PGJ_RS07325 81d42e98be038d7f58a27c88a2697d58 109 SUPERFAMILY SSF51182 4 107 1.95E-22 T 22-04-2016 IPR011051 RmlC-like cupin domain PGJ_RS07325 81d42e98be038d7f58a27c88a2697d58 109 Gene3D G3DSA:2.60.120.10 5 108 1.3E-36 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PGJ_RS07325 81d42e98be038d7f58a27c88a2697d58 109 Pfam PF07883 Cupin domain 40 103 7.7E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel PGJ_RS07325 81d42e98be038d7f58a27c88a2697d58 109 PANTHER PTHR37694 1 109 8.4E-29 T 22-04-2016 PGJ_RS04630 b640a4ae2a23b90b8279d5464a58a9e4 522 Pfam PF13175 AAA ATPase domain 4 314 6.9E-16 T 22-04-2016 PGJ_RS04630 b640a4ae2a23b90b8279d5464a58a9e4 522 Gene3D G3DSA:3.40.50.300 3 319 2.5E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04630 b640a4ae2a23b90b8279d5464a58a9e4 522 SUPERFAMILY SSF52540 4 318 2.66E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03350 0884bd951ef3f178734cbfbc8cfa408f 296 Pfam PF13155 Toprim-like 191 276 1.1E-5 T 22-04-2016 PGJ_RS03350 0884bd951ef3f178734cbfbc8cfa408f 296 Gene3D G3DSA:3.40.1360.10 186 280 8.2E-10 T 22-04-2016 PGJ_RS03350 0884bd951ef3f178734cbfbc8cfa408f 296 Gene3D G3DSA:3.90.580.10 1 88 1.6E-19 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PGJ_RS03350 0884bd951ef3f178734cbfbc8cfa408f 296 Pfam PF01807 CHC2 zinc finger 33 83 1.2E-6 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PGJ_RS03350 0884bd951ef3f178734cbfbc8cfa408f 296 SUPERFAMILY SSF57783 2 90 1.46E-18 T 22-04-2016 PGJ_RS02550 99c7e0a5980a43224a2427488837ca4b 293 PANTHER PTHR12358 2 288 2.9E-48 T 22-04-2016 PGJ_RS02550 99c7e0a5980a43224a2427488837ca4b 293 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 2 269 1.3E-36 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase PGJ_RS02550 99c7e0a5980a43224a2427488837ca4b 293 Pfam PF00781 Diacylglycerol kinase catalytic domain 2 123 5.9E-29 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 PGJ_RS02550 99c7e0a5980a43224a2427488837ca4b 293 SUPERFAMILY SSF111331 1 290 2.09E-70 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain PGJ_RS02550 99c7e0a5980a43224a2427488837ca4b 293 SMART SM00046 2 127 6.4E-5 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 PGJ_RS02550 99c7e0a5980a43224a2427488837ca4b 293 Gene3D G3DSA:3.40.50.10330 47 90 7.5E-4 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PGJ_RS09400 dbb4c40f3045e81c36785ab17bbda253 313 Gene3D G3DSA:3.40.50.2020 162 287 2.6E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS09400 dbb4c40f3045e81c36785ab17bbda253 313 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 130 145 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 PGJ_RS09400 dbb4c40f3045e81c36785ab17bbda253 313 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 311 2.1E-23 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PGJ_RS09400 dbb4c40f3045e81c36785ab17bbda253 313 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 311 5.3E-112 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PGJ_RS09400 dbb4c40f3045e81c36785ab17bbda253 313 PANTHER PTHR10210:SF41 1 311 1.6E-158 T 22-04-2016 PGJ_RS09400 dbb4c40f3045e81c36785ab17bbda253 313 SUPERFAMILY SSF53271 71 302 8.33E-56 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS09400 dbb4c40f3045e81c36785ab17bbda253 313 PANTHER PTHR10210 1 311 1.6E-158 T 22-04-2016 PGJ_RS09400 dbb4c40f3045e81c36785ab17bbda253 313 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 7 312 43.127 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PGJ_RS09400 dbb4c40f3045e81c36785ab17bbda253 313 SMART SM01400 7 122 3.7E-70 T 22-04-2016 PGJ_RS09400 dbb4c40f3045e81c36785ab17bbda253 313 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 122 4.8E-44 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PGJ_RS09400 dbb4c40f3045e81c36785ab17bbda253 313 Gene3D G3DSA:3.40.50.2020 3 161 7.0E-69 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS08025 e936d6a0cdc1edf1bef3878192c1211e 404 SUPERFAMILY SSF102645 188 402 3.66E-67 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 PGJ_RS08025 e936d6a0cdc1edf1bef3878192c1211e 404 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 191 375 2.2E-64 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 PGJ_RS08025 e936d6a0cdc1edf1bef3878192c1211e 404 Gene3D G3DSA:3.40.50.10300 188 401 5.0E-73 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 PGJ_RS08025 e936d6a0cdc1edf1bef3878192c1211e 404 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 401 2.9E-121 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 PGJ_RS08025 e936d6a0cdc1edf1bef3878192c1211e 404 Pfam PF02441 Flavoprotein 8 136 7.0E-32 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 PGJ_RS08025 e936d6a0cdc1edf1bef3878192c1211e 404 SUPERFAMILY SSF52507 5 182 5.63E-56 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 PGJ_RS08025 e936d6a0cdc1edf1bef3878192c1211e 404 PANTHER PTHR14359 4 401 1.3E-165 T 22-04-2016 PGJ_RS08025 e936d6a0cdc1edf1bef3878192c1211e 404 Gene3D G3DSA:3.40.50.1950 3 187 3.0E-59 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 PGJ_RS08025 e936d6a0cdc1edf1bef3878192c1211e 404 PANTHER PTHR14359:SF20 4 401 1.3E-165 T 22-04-2016 PGJ_RS00340 da749dabdd2535f053885a0feea3bf1f 262 PANTHER PTHR32552:SF23 14 221 5.3E-40 T 22-04-2016 PGJ_RS00340 da749dabdd2535f053885a0feea3bf1f 262 PANTHER PTHR32552 14 221 5.3E-40 T 22-04-2016 PGJ_RS00340 da749dabdd2535f053885a0feea3bf1f 262 SUPERFAMILY SSF53098 57 223 7.84E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS00340 da749dabdd2535f053885a0feea3bf1f 262 Pfam PF00665 Integrase core domain 62 181 3.4E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PGJ_RS00340 da749dabdd2535f053885a0feea3bf1f 262 Gene3D G3DSA:3.30.420.10 57 219 1.4E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS04220 1dbcbe302b07b8f24e23dd674006bf81 178 Pfam PF08020 Protein of unknown function (DUF1706) 1 175 1.2E-60 T 22-04-2016 IPR012550 Protein of unknown function DUF1706 PGJ_RS04220 1dbcbe302b07b8f24e23dd674006bf81 178 PANTHER PTHR40658:SF1 1 178 1.7E-75 T 22-04-2016 PGJ_RS04220 1dbcbe302b07b8f24e23dd674006bf81 178 SUPERFAMILY SSF109854 18 153 1.83E-5 T 22-04-2016 PGJ_RS04220 1dbcbe302b07b8f24e23dd674006bf81 178 Gene3D G3DSA:1.20.120.450 55 154 4.6E-7 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase PGJ_RS04220 1dbcbe302b07b8f24e23dd674006bf81 178 PANTHER PTHR40658 1 178 1.7E-75 T 22-04-2016 PGJ_RS04220 1dbcbe302b07b8f24e23dd674006bf81 178 PIRSF PIRSF031551 1 178 5.0E-67 T 22-04-2016 IPR012550 Protein of unknown function DUF1706 PGJ_RS09340 389992d97b3d05d879a0feb14ee8a379 363 Pfam PF16115 Domain of unknown function (DUF4831) 39 356 5.5E-101 T 22-04-2016 IPR032265 Protein of unknown function DUF4831 PGJ_RS05790 edcfce9eb77544ea237aec8d85736395 467 SUPERFAMILY SSF51735 55 217 4.41E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS05790 edcfce9eb77544ea237aec8d85736395 467 Gene3D G3DSA:3.30.360.10 204 338 6.2E-6 T 22-04-2016 PGJ_RS05790 edcfce9eb77544ea237aec8d85736395 467 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 57 181 1.1E-12 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 PGJ_RS05790 edcfce9eb77544ea237aec8d85736395 467 Gene3D G3DSA:3.40.50.720 51 203 1.9E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS05790 edcfce9eb77544ea237aec8d85736395 467 Gene3D G3DSA:3.40.50.720 412 425 1.9E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS05790 edcfce9eb77544ea237aec8d85736395 467 PANTHER PTHR22604:SF2 16 357 4.2E-173 T 22-04-2016 PGJ_RS05790 edcfce9eb77544ea237aec8d85736395 467 PANTHER PTHR22604 16 357 4.2E-173 T 22-04-2016 PGJ_RS05790 edcfce9eb77544ea237aec8d85736395 467 SUPERFAMILY SSF55347 198 341 8.5E-10 T 22-04-2016 PGJ_RS05790 edcfce9eb77544ea237aec8d85736395 467 SUPERFAMILY SSF55347 376 414 8.5E-10 T 22-04-2016 PGJ_RS05790 edcfce9eb77544ea237aec8d85736395 467 PANTHER PTHR22604 384 457 4.2E-173 T 22-04-2016 PGJ_RS05790 edcfce9eb77544ea237aec8d85736395 467 PANTHER PTHR22604:SF2 384 457 4.2E-173 T 22-04-2016 PGJ_RS09690 111aacf8069e2c9288f5a28618b39a85 333 SUPERFAMILY SSF53187 36 324 4.29E-46 T 22-04-2016 PGJ_RS09690 111aacf8069e2c9288f5a28618b39a85 333 Gene3D G3DSA:3.40.630.10 35 324 5.7E-48 T 22-04-2016 PGJ_RS09690 111aacf8069e2c9288f5a28618b39a85 333 Pfam PF04389 Peptidase family M28 106 323 5.8E-45 T 22-04-2016 IPR007484 Peptidase M28 PGJ_RS09690 111aacf8069e2c9288f5a28618b39a85 333 PANTHER PTHR12147 44 324 7.1E-27 T 22-04-2016 PGJ_RS09690 111aacf8069e2c9288f5a28618b39a85 333 PANTHER PTHR12147:SF16 44 324 7.1E-27 T 22-04-2016 PGJ_RS05230 fff83c896c53d0caaa0352d8d1fba0a7 200 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 191 33.764 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 PGJ_RS05230 fff83c896c53d0caaa0352d8d1fba0a7 200 Pfam PF01351 Ribonuclease HII 13 189 2.5E-35 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain PGJ_RS05230 fff83c896c53d0caaa0352d8d1fba0a7 200 SUPERFAMILY SSF53098 6 193 9.71E-65 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS05230 fff83c896c53d0caaa0352d8d1fba0a7 200 Gene3D G3DSA:3.30.420.10 13 152 2.3E-46 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS05230 fff83c896c53d0caaa0352d8d1fba0a7 200 PANTHER PTHR10954 14 189 1.2E-64 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 PGJ_RS08430 0546a29345bd8a0218147085cf025864 419 SUPERFAMILY SSF55205 11 415 1.06E-76 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PGJ_RS08430 0546a29345bd8a0218147085cf025864 419 ProSitePatterns PS00885 EPSP synthase signature 2. 324 342 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS08430 0546a29345bd8a0218147085cf025864 419 Gene3D G3DSA:3.65.10.10 191 415 2.4E-45 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PGJ_RS08430 0546a29345bd8a0218147085cf025864 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 55 407 6.2E-65 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PGJ_RS08430 0546a29345bd8a0218147085cf025864 419 PANTHER PTHR21090:SF5 66 419 1.0E-82 T 22-04-2016 PGJ_RS08430 0546a29345bd8a0218147085cf025864 419 PANTHER PTHR21090 66 419 1.0E-82 T 22-04-2016 PGJ_RS08430 0546a29345bd8a0218147085cf025864 419 Gene3D G3DSA:3.65.10.10 65 190 4.3E-37 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PGJ_RS08430 0546a29345bd8a0218147085cf025864 419 PIRSF PIRSF000505 39 418 9.9E-111 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS00055 03f5f1b9c8813d1cef53d7f91d18f128 342 Gene3D G3DSA:3.40.640.10 33 235 5.7E-50 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS00055 03f5f1b9c8813d1cef53d7f91d18f128 342 SUPERFAMILY SSF53383 15 339 8.93E-58 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS00055 03f5f1b9c8813d1cef53d7f91d18f128 342 PANTHER PTHR11751 1 341 1.4E-50 T 22-04-2016 PGJ_RS00055 03f5f1b9c8813d1cef53d7f91d18f128 342 Pfam PF00155 Aminotransferase class I and II 44 329 5.8E-30 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PGJ_RS00055 03f5f1b9c8813d1cef53d7f91d18f128 342 PANTHER PTHR11751:SF338 1 341 1.4E-50 T 22-04-2016 PGJ_RS00055 03f5f1b9c8813d1cef53d7f91d18f128 342 Gene3D G3DSA:3.90.1150.10 236 340 6.6E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS05535 96f5b0aa808ad0e92542b5508db30d54 411 Pfam PF13102 Phage integrase SAM-like domain 9 175 1.5E-28 T 22-04-2016 IPR025269 Phage integrase SAM-like domain PGJ_RS05535 96f5b0aa808ad0e92542b5508db30d54 411 SUPERFAMILY SSF56349 114 393 9.71E-42 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS05535 96f5b0aa808ad0e92542b5508db30d54 411 PANTHER PTHR30349 40 411 2.0E-86 T 22-04-2016 PGJ_RS05535 96f5b0aa808ad0e92542b5508db30d54 411 PANTHER PTHR30349:SF26 40 411 2.0E-86 T 22-04-2016 PGJ_RS05535 96f5b0aa808ad0e92542b5508db30d54 411 Pfam PF00589 Phage integrase family 224 385 6.5E-15 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS05535 96f5b0aa808ad0e92542b5508db30d54 411 Gene3D G3DSA:1.10.443.10 221 399 2.5E-29 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS08700 60ce4280450acfa80408d381af415ba3 245 Pfam PF02565 Recombination protein O C terminal 88 233 1.5E-20 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PGJ_RS08700 60ce4280450acfa80408d381af415ba3 245 SUPERFAMILY SSF50249 2 80 5.14E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS08700 60ce4280450acfa80408d381af415ba3 245 Hamap MF_00201 DNA repair protein RecO [recO]. 1 243 15.407 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PGJ_RS08700 60ce4280450acfa80408d381af415ba3 245 PANTHER PTHR33991 1 240 4.4E-20 T 22-04-2016 PGJ_RS08700 60ce4280450acfa80408d381af415ba3 245 SUPERFAMILY SSF57863 85 228 1.54E-20 T 22-04-2016 PGJ_RS08700 60ce4280450acfa80408d381af415ba3 245 Gene3D G3DSA:2.40.50.140 4 86 1.7E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS08700 60ce4280450acfa80408d381af415ba3 245 Pfam PF11967 Recombination protein O N terminal 1 81 6.3E-19 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal PGJ_RS06885 2e244dcfdea4939eb1659569238e137d 279 Gene3D G3DSA:3.40.50.1820 1 271 8.3E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS06885 2e244dcfdea4939eb1659569238e137d 279 PANTHER PTHR10907 24 177 2.8E-37 T 22-04-2016 PGJ_RS06885 2e244dcfdea4939eb1659569238e137d 279 PANTHER PTHR10907 194 205 2.8E-37 T 22-04-2016 PGJ_RS06885 2e244dcfdea4939eb1659569238e137d 279 PANTHER PTHR10907:SF33 24 177 2.8E-37 T 22-04-2016 PGJ_RS06885 2e244dcfdea4939eb1659569238e137d 279 PANTHER PTHR10907:SF33 194 205 2.8E-37 T 22-04-2016 PGJ_RS06885 2e244dcfdea4939eb1659569238e137d 279 Pfam PF00756 Putative esterase 31 259 1.3E-29 T 22-04-2016 IPR000801 Putative esterase PGJ_RS06885 2e244dcfdea4939eb1659569238e137d 279 SUPERFAMILY SSF53474 23 270 2.37E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS09830 d26104f86a46efa25709ba84b15e8d51 295 PIRSF PIRSF005355 1 295 5.4E-89 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 PGJ_RS09830 d26104f86a46efa25709ba84b15e8d51 295 Pfam PF01040 UbiA prenyltransferase family 26 265 4.2E-38 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PGJ_RS09830 d26104f86a46efa25709ba84b15e8d51 295 PANTHER PTHR13929 9 292 2.4E-56 T 22-04-2016 PGJ_RS09830 d26104f86a46efa25709ba84b15e8d51 295 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 285 5.1E-50 T 22-04-2016 PGJ_RS09830 d26104f86a46efa25709ba84b15e8d51 295 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 291 18.725 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PGJ_RS09830 d26104f86a46efa25709ba84b15e8d51 295 PANTHER PTHR13929:SF0 9 292 2.4E-56 T 22-04-2016 PGJ_RS04420 33a029ae5b98678bf0fe0d3bf132fd8c 581 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 302 1.8E-95 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PGJ_RS04420 33a029ae5b98678bf0fe0d3bf132fd8c 581 Pfam PF04551 GcpE protein 13 299 8.4E-103 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PGJ_RS04420 33a029ae5b98678bf0fe0d3bf132fd8c 581 Pfam PF04551 GcpE protein 435 574 3.9E-41 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PGJ_RS04420 33a029ae5b98678bf0fe0d3bf132fd8c 581 SUPERFAMILY SSF56014 484 581 3.07E-12 T 22-04-2016 PGJ_RS04420 33a029ae5b98678bf0fe0d3bf132fd8c 581 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 577 41.522 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PGJ_RS04420 33a029ae5b98678bf0fe0d3bf132fd8c 581 PANTHER PTHR30454 1 580 3.2E-183 T 22-04-2016 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 PRINTS PR00096 Glutamine amidotransferase superfamily signature 163 176 6.4E-6 T 22-04-2016 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 6.4E-6 T 22-04-2016 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 6.4E-6 T 22-04-2016 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 PANTHER PTHR11922 3 503 2.0E-257 T 22-04-2016 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 Gene3D G3DSA:3.30.300.10 382 506 1.4E-51 T 22-04-2016 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 PANTHER PTHR11922:SF2 3 503 2.0E-257 T 22-04-2016 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 198 506 2.8E-142 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 506 52.331 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 SUPERFAMILY SSF52317 4 229 1.4E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 189 2.3E-58 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 Pfam PF00117 Glutamine amidotransferase class-I 7 184 4.1E-32 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 Pfam PF02540 NAD synthase 204 280 1.2E-6 T 22-04-2016 IPR022310 NAD/GMP synthase PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 Pfam PF00958 GMP synthase C terminal domain 416 505 5.9E-43 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 SUPERFAMILY SSF52402 183 427 3.09E-53 T 22-04-2016 PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 Gene3D G3DSA:3.40.50.880 3 207 1.3E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 Gene3D G3DSA:3.40.50.620 208 375 1.5E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS06105 93faefbe52cb7e1e9537b370d12d9c27 506 SUPERFAMILY SSF54810 386 506 8.76E-51 T 22-04-2016 PGJ_RS05645 f53af109cf489349ad028c6a85434df6 142 Pfam PF11888 Protein of unknown function (DUF3408) 9 136 4.9E-32 T 22-04-2016 IPR021823 Protein of unknown function DUF3408 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 5 341 61.095 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 PANTHER PTHR11735 1 326 1.3E-140 T 22-04-2016 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 Pfam PF00814 Glycoprotease family 27 316 3.0E-96 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 7 323 7.5E-121 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 161 182 4.2E-39 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 78 98 4.2E-39 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 273 282 4.2E-39 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 99 118 4.2E-39 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 4.2E-39 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 SUPERFAMILY SSF53067 104 317 4.32E-40 T 22-04-2016 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 Gene3D G3DSA:3.30.420.40 6 166 1.4E-45 T 22-04-2016 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 PANTHER PTHR11735:SF6 1 326 1.3E-140 T 22-04-2016 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 SUPERFAMILY SSF53067 6 123 3.17E-30 T 22-04-2016 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 ProSitePatterns PS01016 Glycoprotease family signature. 98 118 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PGJ_RS01320 5673c48a1f843ff716c2d19f81b31a14 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 8 316 9.1E-101 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PGJ_RS05835 85b037c260868f2724404b7a8911e2a5 100 SMART SM00886 2 100 1.8E-25 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel PGJ_RS05835 85b037c260868f2724404b7a8911e2a5 100 Gene3D G3DSA:3.30.70.900 1 100 1.8E-23 T 22-04-2016 PGJ_RS05835 85b037c260868f2724404b7a8911e2a5 100 Pfam PF07876 Stress responsive A/B Barrel Domain 2 99 2.5E-21 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel PGJ_RS05835 85b037c260868f2724404b7a8911e2a5 100 SUPERFAMILY SSF54909 1 100 6.08E-18 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel PGJ_RS05835 85b037c260868f2724404b7a8911e2a5 100 PANTHER PTHR37832:SF1 1 100 7.1E-16 T 22-04-2016 PGJ_RS05835 85b037c260868f2724404b7a8911e2a5 100 PANTHER PTHR37832 1 100 7.1E-16 T 22-04-2016 PGJ_RS05355 c4d10350fbca7d6ccdb13b3742482d04 143 Pfam PF03724 META domain 33 135 4.7E-13 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ PGJ_RS08850 5cc683100fa05c725ea13d72dadbbeff 668 Gene3D G3DSA:3.40.50.300 202 277 3.5E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08850 5cc683100fa05c725ea13d72dadbbeff 668 Gene3D G3DSA:3.40.50.300 413 577 3.5E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08850 5cc683100fa05c725ea13d72dadbbeff 668 Pfam PF14293 YWFCY protein 2 61 5.3E-27 T 22-04-2016 IPR025988 YWFCY domain PGJ_RS08850 5cc683100fa05c725ea13d72dadbbeff 668 Pfam PF12696 TraM recognition site of TraD and TraG 461 571 4.3E-14 T 22-04-2016 IPR032689 TraD/TraG, TraM recognition site PGJ_RS08850 5cc683100fa05c725ea13d72dadbbeff 668 SUPERFAMILY SSF52540 192 578 1.2E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04175 6a3691efdb9846e12ab8e2934d043199 275 PANTHER PTHR24220:SF530 3 217 8.0E-45 T 22-04-2016 PGJ_RS04175 6a3691efdb9846e12ab8e2934d043199 275 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS04175 6a3691efdb9846e12ab8e2934d043199 275 PANTHER PTHR24220 3 217 8.0E-45 T 22-04-2016 PGJ_RS04175 6a3691efdb9846e12ab8e2934d043199 275 Pfam PF00005 ABC transporter 19 156 1.9E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS04175 6a3691efdb9846e12ab8e2934d043199 275 Gene3D G3DSA:3.40.50.300 1 219 3.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04175 6a3691efdb9846e12ab8e2934d043199 275 SMART SM00382 27 216 1.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS04175 6a3691efdb9846e12ab8e2934d043199 275 SUPERFAMILY SSF52540 2 221 3.82E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01435 dacc33201284232f30858e82cb495ab1 355 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 178 187 - T 22-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 PGJ_RS01435 dacc33201284232f30858e82cb495ab1 355 SUPERFAMILY SSF74650 12 351 3.33E-117 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PGJ_RS01435 dacc33201284232f30858e82cb495ab1 355 PANTHER PTHR10091 17 354 3.8E-157 T 22-04-2016 PGJ_RS01435 dacc33201284232f30858e82cb495ab1 355 PIRSF PIRSF005096 4 354 1.2E-125 T 22-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 PGJ_RS01435 dacc33201284232f30858e82cb495ab1 355 PANTHER PTHR10091:SF0 17 354 3.8E-157 T 22-04-2016 PGJ_RS01435 dacc33201284232f30858e82cb495ab1 355 Gene3D G3DSA:2.70.98.10 13 353 7.3E-131 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PGJ_RS01435 dacc33201284232f30858e82cb495ab1 355 Pfam PF01263 Aldose 1-epimerase 22 349 3.1E-88 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PGJ_RS00210 a49ee42786fd1d9b1e1c9f5bfb6c2b32 385 SUPERFAMILY SSF53098 114 352 1.67E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS00210 a49ee42786fd1d9b1e1c9f5bfb6c2b32 385 PANTHER PTHR33258 2 339 4.6E-66 T 22-04-2016 PGJ_RS00210 a49ee42786fd1d9b1e1c9f5bfb6c2b32 385 Gene3D G3DSA:3.90.350.10 188 311 8.5E-7 T 22-04-2016 IPR014736 Transposase, Tn5-like, core PGJ_RS00210 a49ee42786fd1d9b1e1c9f5bfb6c2b32 385 PANTHER PTHR33258:SF1 2 339 4.6E-66 T 22-04-2016 PGJ_RS00210 a49ee42786fd1d9b1e1c9f5bfb6c2b32 385 Pfam PF14294 Domain of unknown function (DUF4372) 4 75 1.2E-23 T 22-04-2016 IPR025399 Domain of unknown function DUF4372 PGJ_RS00210 a49ee42786fd1d9b1e1c9f5bfb6c2b32 385 Pfam PF01609 Transposase DDE domain 121 334 2.0E-29 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS06915 31c1dea8551b9eaa2082cd588b1a005a 286 PANTHER PTHR39200:SF1 1 149 9.6E-35 T 22-04-2016 PGJ_RS06915 31c1dea8551b9eaa2082cd588b1a005a 286 PANTHER PTHR39200:SF1 171 279 9.6E-35 T 22-04-2016 PGJ_RS06915 31c1dea8551b9eaa2082cd588b1a005a 286 PANTHER PTHR39200 1 149 9.6E-35 T 22-04-2016 PGJ_RS06915 31c1dea8551b9eaa2082cd588b1a005a 286 PANTHER PTHR39200 171 279 9.6E-35 T 22-04-2016 PGJ_RS06915 31c1dea8551b9eaa2082cd588b1a005a 286 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 44 167 7.0E-26 T 22-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 SUPERFAMILY SSF52029 184 376 2.79E-87 T 22-04-2016 IPR027409 GroEL-like apical domain PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 Gene3D G3DSA:1.10.560.10 3 188 1.7E-41 T 22-04-2016 IPR027413 GroEL-like equatorial domain PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 Gene3D G3DSA:3.50.7.10 189 366 4.9E-102 T 22-04-2016 IPR027409 GroEL-like apical domain PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 PRINTS PR00298 60kDa chaperonin signature 398 419 1.5E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 PRINTS PR00298 60kDa chaperonin signature 268 291 1.5E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 PRINTS PR00298 60kDa chaperonin signature 82 109 1.5E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 PRINTS PR00298 60kDa chaperonin signature 26 52 1.5E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 PRINTS PR00298 60kDa chaperonin signature 350 375 1.5E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 SUPERFAMILY SSF54849 142 197 1.43E-16 T 22-04-2016 PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 PANTHER PTHR11353 1 545 5.4E-243 T 22-04-2016 PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 Hamap MF_00600 60 kDa chaperonin [groL]. 1 544 41.573 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 525 2.4E-97 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 Gene3D G3DSA:1.10.560.10 367 518 6.1E-41 T 22-04-2016 IPR027413 GroEL-like equatorial domain PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 SUPERFAMILY SSF48592 6 133 7.99E-73 T 22-04-2016 PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 SUPERFAMILY SSF48592 406 521 7.99E-73 T 22-04-2016 PGJ_RS06405 f87ffc4e0173c1736c867e7da1bb81bd 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 527 5.2E-264 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PGJ_RS08755 68046a51e3412af17df376b26cb768d5 222 SUPERFAMILY SSF56784 4 211 2.86E-21 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS08755 68046a51e3412af17df376b26cb768d5 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 75 179 1.6E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PGJ_RS08755 68046a51e3412af17df376b26cb768d5 222 Gene3D G3DSA:3.40.50.1000 4 17 6.9E-19 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS08755 68046a51e3412af17df376b26cb768d5 222 Gene3D G3DSA:3.40.50.1000 88 212 6.9E-19 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS08755 68046a51e3412af17df376b26cb768d5 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 183 5.5E-11 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS04380 c5b30fdb10ded3013c37446b0c083be7 255 PANTHER PTHR23417 33 220 1.3E-44 T 22-04-2016 PGJ_RS04380 c5b30fdb10ded3013c37446b0c083be7 255 Pfam PF02390 Putative methyltransferase 48 215 5.1E-28 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 PGJ_RS04380 c5b30fdb10ded3013c37446b0c083be7 255 SUPERFAMILY SSF53335 44 219 3.35E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS04380 c5b30fdb10ded3013c37446b0c083be7 255 Gene3D G3DSA:3.40.50.150 44 111 2.3E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS04380 c5b30fdb10ded3013c37446b0c083be7 255 PANTHER PTHR23417:SF14 33 220 1.3E-44 T 22-04-2016 PGJ_RS04380 c5b30fdb10ded3013c37446b0c083be7 255 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 7 223 20.603 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 PGJ_RS02565 390c49236e58d81b5db49433d49d9634 373 Pfam PF00534 Glycosyl transferases group 1 200 340 2.7E-27 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 PGJ_RS02565 390c49236e58d81b5db49433d49d9634 373 SUPERFAMILY SSF53756 7 341 7.33E-47 T 22-04-2016 PGJ_RS02565 390c49236e58d81b5db49433d49d9634 373 Gene3D G3DSA:3.40.50.2000 202 340 4.1E-27 T 22-04-2016 PGJ_RS02565 390c49236e58d81b5db49433d49d9634 373 PANTHER PTHR12526 1 340 1.3E-29 T 22-04-2016 PGJ_RS06710 a498212550382f440002a0addd061183 467 PANTHER PTHR23512 131 467 2.9E-84 T 22-04-2016 PGJ_RS06710 a498212550382f440002a0addd061183 467 PANTHER PTHR23512 14 108 2.9E-84 T 22-04-2016 PGJ_RS06710 a498212550382f440002a0addd061183 467 Pfam PF07690 Major Facilitator Superfamily 124 274 2.9E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PGJ_RS06710 a498212550382f440002a0addd061183 467 Pfam PF07690 Major Facilitator Superfamily 282 452 1.7E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PGJ_RS06710 a498212550382f440002a0addd061183 467 Gene3D G3DSA:1.20.1250.20 255 450 6.1E-23 T 22-04-2016 PGJ_RS06710 a498212550382f440002a0addd061183 467 Gene3D G3DSA:1.20.1250.20 17 232 8.7E-13 T 22-04-2016 PGJ_RS06710 a498212550382f440002a0addd061183 467 SUPERFAMILY SSF103473 13 455 7.06E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain PGJ_RS00120 5a564964d30661e719cde18222b75df6 180 Gene3D G3DSA:3.40.1280.10 14 174 8.1E-47 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PGJ_RS00120 5a564964d30661e719cde18222b75df6 180 PANTHER PTHR12029:SF60 7 174 1.6E-78 T 22-04-2016 PGJ_RS00120 5a564964d30661e719cde18222b75df6 180 Pfam PF00588 SpoU rRNA Methylase family 25 167 2.3E-33 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PGJ_RS00120 5a564964d30661e719cde18222b75df6 180 PANTHER PTHR12029 7 174 1.6E-78 T 22-04-2016 PGJ_RS00120 5a564964d30661e719cde18222b75df6 180 SUPERFAMILY SSF75217 8 173 3.99E-40 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PGJ_RS03185 d448db042e258724017d9311f2d0cc19 92 Pfam PF12728 Helix-turn-helix domain 43 86 2.5E-9 T 22-04-2016 PGJ_RS03185 d448db042e258724017d9311f2d0cc19 92 SUPERFAMILY SSF46955 38 85 3.02E-10 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS03185 d448db042e258724017d9311f2d0cc19 92 PANTHER PTHR34585 1 85 6.2E-17 T 22-04-2016 PGJ_RS03185 d448db042e258724017d9311f2d0cc19 92 Gene3D G3DSA:1.10.10.10 39 88 4.6E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS01225 7c82f0dd9434d0e1946786cd8e0ba629 169 ProSitePatterns PS00194 Thioredoxin family active site. 82 100 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PGJ_RS01225 7c82f0dd9434d0e1946786cd8e0ba629 169 Gene3D G3DSA:3.40.30.10 46 165 2.2E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS01225 7c82f0dd9434d0e1946786cd8e0ba629 169 PRINTS PR00421 Thioredoxin family signature 89 98 1.3E-5 T 22-04-2016 PGJ_RS01225 7c82f0dd9434d0e1946786cd8e0ba629 169 PRINTS PR00421 Thioredoxin family signature 129 140 1.3E-5 T 22-04-2016 PGJ_RS01225 7c82f0dd9434d0e1946786cd8e0ba629 169 PRINTS PR00421 Thioredoxin family signature 81 89 1.3E-5 T 22-04-2016 PGJ_RS01225 7c82f0dd9434d0e1946786cd8e0ba629 169 SUPERFAMILY SSF52833 63 164 3.6E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS01225 7c82f0dd9434d0e1946786cd8e0ba629 169 Pfam PF00085 Thioredoxin 71 163 1.5E-23 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 PGJ_RS01225 7c82f0dd9434d0e1946786cd8e0ba629 169 PANTHER PTHR10438 71 168 3.9E-28 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PGJ_RS08250 dd71ed0300f7ef6f3634e276fb56ea99 663 Pfam PF16314 Domain of unknown function (DUF4954) 8 662 0.0 T 22-04-2016 IPR032533 Protein of unknown function DUF4954 PGJ_RS08250 dd71ed0300f7ef6f3634e276fb56ea99 663 Gene3D G3DSA:2.160.10.10 183 264 6.6E-5 T 22-04-2016 PGJ_RS08250 dd71ed0300f7ef6f3634e276fb56ea99 663 SUPERFAMILY SSF51161 183 256 9.42E-6 T 22-04-2016 IPR011004 Trimeric LpxA-like PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 Pfam PF03448 MgtE intracellular N domain 30 133 7.0E-21 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 SMART SM00116 206 254 8.2E-9 T 22-04-2016 IPR000644 CBS domain PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 SMART SM00116 142 195 110.0 T 22-04-2016 IPR000644 CBS domain PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 PANTHER PTHR11911:SF23 104 432 3.3E-36 T 22-04-2016 PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 PANTHER PTHR11911:SF23 25 65 3.3E-36 T 22-04-2016 PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 SUPERFAMILY SSF161093 278 446 1.83E-41 T 22-04-2016 PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 TIGRFAM TIGR00400 mgtE: magnesium transporter 14 447 1.5E-96 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 Pfam PF01769 Divalent cation transporter 319 441 1.9E-27 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 PANTHER PTHR11911 104 432 3.3E-36 T 22-04-2016 PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 PANTHER PTHR11911 25 65 3.3E-36 T 22-04-2016 PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 Gene3D G3DSA:3.10.580.10 129 260 1.5E-23 T 22-04-2016 PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 Pfam PF00571 CBS domain 135 191 2.2E-5 T 22-04-2016 IPR000644 CBS domain PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 Pfam PF00571 CBS domain 202 253 1.4E-9 T 22-04-2016 IPR000644 CBS domain PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 SMART SM00924 30 135 6.9E-27 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 Gene3D G3DSA:1.25.60.10 4 128 1.2E-26 T 22-04-2016 PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 SUPERFAMILY SSF54631 134 268 2.65E-29 T 22-04-2016 PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 SUPERFAMILY SSF158791 4 132 7.59E-23 T 22-04-2016 PGJ_RS00615 a08134bd99c08c2fef2bf544ae02ed0e 450 Gene3D G3DSA:1.10.357.20 277 447 3.4E-44 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 PGJ_RS04300 a6d13afd1aff3c1bc483f34683a3d706 774 PANTHER PTHR12815:SF13 55 233 3.4E-118 T 22-04-2016 PGJ_RS04300 a6d13afd1aff3c1bc483f34683a3d706 774 PANTHER PTHR12815:SF13 273 563 3.4E-118 T 22-04-2016 PGJ_RS04300 a6d13afd1aff3c1bc483f34683a3d706 774 PANTHER PTHR12815:SF13 584 774 3.4E-118 T 22-04-2016 PGJ_RS04300 a6d13afd1aff3c1bc483f34683a3d706 774 Pfam PF01103 Surface antigen 583 746 2.2E-24 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 PGJ_RS04300 a6d13afd1aff3c1bc483f34683a3d706 774 Gene3D G3DSA:2.40.160.50 562 752 5.1E-10 T 22-04-2016 PGJ_RS04300 a6d13afd1aff3c1bc483f34683a3d706 774 PANTHER PTHR12815 55 233 3.4E-118 T 22-04-2016 PGJ_RS04300 a6d13afd1aff3c1bc483f34683a3d706 774 PANTHER PTHR12815 273 563 3.4E-118 T 22-04-2016 PGJ_RS04300 a6d13afd1aff3c1bc483f34683a3d706 774 PANTHER PTHR12815 584 774 3.4E-118 T 22-04-2016 PGJ_RS07750 07b9fc949068bc5db90ea3fc37b59be8 400 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 46 57 - T 22-04-2016 IPR000169 Cysteine peptidase, cysteine active site PGJ_RS07750 07b9fc949068bc5db90ea3fc37b59be8 400 Pfam PF03051 Peptidase C1-like family 6 271 2.0E-10 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 PGJ_RS07750 07b9fc949068bc5db90ea3fc37b59be8 400 Pfam PF03051 Peptidase C1-like family 333 395 1.7E-6 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 PGJ_RS07750 07b9fc949068bc5db90ea3fc37b59be8 400 SUPERFAMILY SSF54001 24 271 2.32E-55 T 22-04-2016 PGJ_RS07750 07b9fc949068bc5db90ea3fc37b59be8 400 SUPERFAMILY SSF54001 302 390 2.32E-55 T 22-04-2016 PGJ_RS07750 07b9fc949068bc5db90ea3fc37b59be8 400 PIRSF PIRSF005700 1 400 1.2E-47 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 PGJ_RS07750 07b9fc949068bc5db90ea3fc37b59be8 400 Gene3D G3DSA:3.90.70.10 35 397 1.3E-79 T 22-04-2016 PGJ_RS04305 b648c87642e81799db48f6ff954f7d20 249 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 87 4.5E-22 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS04305 b648c87642e81799db48f6ff954f7d20 249 SUPERFAMILY SSF51735 105 248 3.4E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS04305 b648c87642e81799db48f6ff954f7d20 249 Gene3D G3DSA:3.40.50.720 109 248 6.8E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS04305 b648c87642e81799db48f6ff954f7d20 249 SUPERFAMILY SSF53223 2 104 2.99E-23 T 22-04-2016 PGJ_RS04305 b648c87642e81799db48f6ff954f7d20 249 Gene3D G3DSA:3.40.192.10 1 108 7.0E-33 T 22-04-2016 PGJ_RS04305 b648c87642e81799db48f6ff954f7d20 249 PANTHER PTHR21089 1 246 3.0E-65 T 22-04-2016 PGJ_RS04125 f32054d70c67ceb1eb92ddddf75c967e 325 SUPERFAMILY SSF56322 59 322 4.06E-66 T 22-04-2016 IPR005801 ADC synthase GO:0009058 PGJ_RS04125 f32054d70c67ceb1eb92ddddf75c967e 325 Gene3D G3DSA:3.60.120.10 54 321 1.7E-71 T 22-04-2016 IPR005801 ADC synthase GO:0009058 PGJ_RS04125 f32054d70c67ceb1eb92ddddf75c967e 325 PANTHER PTHR11236 76 321 9.7E-64 T 22-04-2016 PGJ_RS04125 f32054d70c67ceb1eb92ddddf75c967e 325 PRINTS PR00095 Anthranilate synthase component I signature 276 290 3.9E-11 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PGJ_RS04125 f32054d70c67ceb1eb92ddddf75c967e 325 PRINTS PR00095 Anthranilate synthase component I signature 262 276 3.9E-11 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PGJ_RS04125 f32054d70c67ceb1eb92ddddf75c967e 325 PRINTS PR00095 Anthranilate synthase component I signature 164 177 3.9E-11 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PGJ_RS04125 f32054d70c67ceb1eb92ddddf75c967e 325 PRINTS PR00095 Anthranilate synthase component I signature 178 191 3.9E-11 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PGJ_RS04125 f32054d70c67ceb1eb92ddddf75c967e 325 Pfam PF00425 chorismate binding enzyme 76 320 1.9E-60 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PGJ_RS04540 7aea13ff8785a07a7e4d483c59c8848e 111 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 110 1.1E-17 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 PGJ_RS04540 7aea13ff8785a07a7e4d483c59c8848e 111 Pfam PF02033 Ribosome-binding factor A 5 109 8.8E-24 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 PGJ_RS04540 7aea13ff8785a07a7e4d483c59c8848e 111 Gene3D G3DSA:3.30.300.20 1 111 1.6E-25 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta PGJ_RS04540 7aea13ff8785a07a7e4d483c59c8848e 111 PANTHER PTHR33515 1 111 1.8E-30 T 22-04-2016 PGJ_RS04540 7aea13ff8785a07a7e4d483c59c8848e 111 SUPERFAMILY SSF89919 1 111 2.22E-27 T 22-04-2016 IPR023799 Ribosome-binding factor A domain PGJ_RS04540 7aea13ff8785a07a7e4d483c59c8848e 111 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 96 8.0E-37 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 PGJ_RS00490 6fc5b050f05335f9795d572421afb9e5 368 PANTHER PTHR22926:SF3 11 365 1.2E-58 T 22-04-2016 PGJ_RS00490 6fc5b050f05335f9795d572421afb9e5 368 Pfam PF00953 Glycosyl transferase family 4 97 254 1.9E-28 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS00490 6fc5b050f05335f9795d572421afb9e5 368 ProSitePatterns PS01348 MraY family signature 2. 170 181 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS00490 6fc5b050f05335f9795d572421afb9e5 368 PANTHER PTHR22926 11 365 1.2E-58 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PGJ_RS04775 3a96559581407fa2b0706ca1f5b0bd22 115 Pfam PF05713 Bacterial mobilisation protein (MobC) 70 111 5.1E-7 T 22-04-2016 IPR008687 Bacterial mobilisation PGJ_RS06920 4f6a2e3578aca91519f610a0a9b8f003 222 Gene3D G3DSA:3.90.226.10 44 221 2.5E-80 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS06920 4f6a2e3578aca91519f610a0a9b8f003 222 PRINTS PR00127 Clp protease catalytic subunit P signature 195 214 3.2E-48 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PGJ_RS06920 4f6a2e3578aca91519f610a0a9b8f003 222 PRINTS PR00127 Clp protease catalytic subunit P signature 86 106 3.2E-48 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PGJ_RS06920 4f6a2e3578aca91519f610a0a9b8f003 222 PRINTS PR00127 Clp protease catalytic subunit P signature 117 134 3.2E-48 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PGJ_RS06920 4f6a2e3578aca91519f610a0a9b8f003 222 PRINTS PR00127 Clp protease catalytic subunit P signature 138 157 3.2E-48 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PGJ_RS06920 4f6a2e3578aca91519f610a0a9b8f003 222 PRINTS PR00127 Clp protease catalytic subunit P signature 46 61 3.2E-48 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PGJ_RS06920 4f6a2e3578aca91519f610a0a9b8f003 222 Pfam PF00574 Clp protease 44 219 2.2E-79 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PGJ_RS06920 4f6a2e3578aca91519f610a0a9b8f003 222 PANTHER PTHR10381:SF22 19 222 2.7E-107 T 22-04-2016 PGJ_RS06920 4f6a2e3578aca91519f610a0a9b8f003 222 SUPERFAMILY SSF52096 40 219 1.37E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS06920 4f6a2e3578aca91519f610a0a9b8f003 222 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 139 152 - T 22-04-2016 IPR033135 ClpP, histidine active site PGJ_RS06920 4f6a2e3578aca91519f610a0a9b8f003 222 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 30 220 41.19 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PGJ_RS06920 4f6a2e3578aca91519f610a0a9b8f003 222 PANTHER PTHR10381 19 222 2.7E-107 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PGJ_RS08255 0eee64ca65f3fbbb854cf3056cf2117e 159 SUPERFAMILY SSF64263 1 119 2.22E-45 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08255 0eee64ca65f3fbbb854cf3056cf2117e 159 PANTHER PTHR14413:SF5 1 119 4.2E-53 T 22-04-2016 PGJ_RS08255 0eee64ca65f3fbbb854cf3056cf2117e 159 PANTHER PTHR14413 1 119 4.2E-53 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08255 0eee64ca65f3fbbb854cf3056cf2117e 159 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.7E-38 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08255 0eee64ca65f3fbbb854cf3056cf2117e 159 Pfam PF01196 Ribosomal protein L17 20 116 4.0E-30 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08255 0eee64ca65f3fbbb854cf3056cf2117e 159 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.369 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08255 0eee64ca65f3fbbb854cf3056cf2117e 159 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08255 0eee64ca65f3fbbb854cf3056cf2117e 159 Gene3D G3DSA:3.90.1030.10 1 117 1.2E-44 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08810 c6cbe4ad933c74f43c49a34155787723 858 SUPERFAMILY SSF56935 524 537 8.7E-15 T 22-04-2016 PGJ_RS08810 c6cbe4ad933c74f43c49a34155787723 858 SUPERFAMILY SSF56935 566 712 8.7E-15 T 22-04-2016 PGJ_RS08810 c6cbe4ad933c74f43c49a34155787723 858 SUPERFAMILY SSF56935 758 858 8.7E-15 T 22-04-2016 PGJ_RS08810 c6cbe4ad933c74f43c49a34155787723 858 SUPERFAMILY SSF56935 105 279 8.7E-15 T 22-04-2016 PGJ_RS08810 c6cbe4ad933c74f43c49a34155787723 858 SUPERFAMILY SSF56935 311 453 8.7E-15 T 22-04-2016 PGJ_RS08810 c6cbe4ad933c74f43c49a34155787723 858 Pfam PF13715 CarboxypepD_reg-like domain 23 111 1.6E-9 T 22-04-2016 PGJ_RS08810 c6cbe4ad933c74f43c49a34155787723 858 Gene3D G3DSA:2.170.130.10 132 201 8.3E-4 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS08810 c6cbe4ad933c74f43c49a34155787723 858 Gene3D G3DSA:2.60.40.1120 22 83 1.2E-5 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS08810 c6cbe4ad933c74f43c49a34155787723 858 SUPERFAMILY SSF49464 21 109 1.01E-9 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS04400 8f2c50b0596118748c6094025c3cceb5 431 Pfam PF01551 Peptidase family M23 334 426 6.1E-17 T 22-04-2016 IPR016047 Peptidase M23 PGJ_RS04400 8f2c50b0596118748c6094025c3cceb5 431 PANTHER PTHR21666:SF200 5 431 2.5E-45 T 22-04-2016 PGJ_RS04400 8f2c50b0596118748c6094025c3cceb5 431 SUPERFAMILY SSF51261 238 430 3.66E-28 T 22-04-2016 IPR011055 Duplicated hybrid motif PGJ_RS04400 8f2c50b0596118748c6094025c3cceb5 431 PANTHER PTHR21666 5 431 2.5E-45 T 22-04-2016 PGJ_RS04400 8f2c50b0596118748c6094025c3cceb5 431 Gene3D G3DSA:2.70.70.10 287 431 1.2E-26 T 22-04-2016 PGJ_RS02430 04ecbdf69708bf1fdeec6c281ec5e958 428 Gene3D G3DSA:3.80.10.10 97 278 7.5E-29 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PGJ_RS02430 04ecbdf69708bf1fdeec6c281ec5e958 428 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 360 428 7.8E-11 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS02430 04ecbdf69708bf1fdeec6c281ec5e958 428 SUPERFAMILY SSF52058 97 280 6.63E-22 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PGJ_RS09985 ed163cea0184a29e96617028583540a7 487 PANTHER PTHR32024 4 487 2.7E-168 T 22-04-2016 PGJ_RS09985 ed163cea0184a29e96617028583540a7 487 Pfam PF02386 Cation transport protein 67 477 3.8E-61 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PGJ_RS09985 ed163cea0184a29e96617028583540a7 487 PIRSF PIRSF006247 2 487 7.4E-153 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 PGJ_RS09985 ed163cea0184a29e96617028583540a7 487 PANTHER PTHR32024:SF2 4 487 2.7E-168 T 22-04-2016 PGJ_RS02715 bf2e04d8180f59d824337414fd2f68f9 395 PANTHER PTHR33393 39 301 6.0E-60 T 22-04-2016 PGJ_RS02715 bf2e04d8180f59d824337414fd2f68f9 395 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 48 293 9.1E-70 T 22-04-2016 IPR019079 Capsule synthesis protein, CapA PGJ_RS02715 bf2e04d8180f59d824337414fd2f68f9 395 SUPERFAMILY SSF56300 47 327 1.76E-41 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS02715 bf2e04d8180f59d824337414fd2f68f9 395 SMART SM00854 48 293 2.1E-96 T 22-04-2016 IPR019079 Capsule synthesis protein, CapA PGJ_RS02715 bf2e04d8180f59d824337414fd2f68f9 395 PANTHER PTHR33393:SF2 39 301 6.0E-60 T 22-04-2016 PGJ_RS02715 bf2e04d8180f59d824337414fd2f68f9 395 Gene3D G3DSA:3.60.21.30 47 290 8.3E-24 T 22-04-2016 PGJ_RS03150 607570a37cf0daba17aadb5f0f6d57c3 179 Gene3D G3DSA:2.160.10.10 5 164 6.6E-46 T 22-04-2016 PGJ_RS03150 607570a37cf0daba17aadb5f0f6d57c3 179 PANTHER PTHR13061 1 178 3.5E-65 T 22-04-2016 PGJ_RS03150 607570a37cf0daba17aadb5f0f6d57c3 179 SUPERFAMILY SSF51161 5 167 3.33E-47 T 22-04-2016 IPR011004 Trimeric LpxA-like PGJ_RS03150 607570a37cf0daba17aadb5f0f6d57c3 179 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 46 6.0E-6 T 22-04-2016 IPR001451 Hexapeptide repeat PGJ_RS03150 607570a37cf0daba17aadb5f0f6d57c3 179 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 123 7.6E-8 T 22-04-2016 IPR001451 Hexapeptide repeat PGJ_RS07420 cd6e9fa8cdc0d098daab79fec3ef3923 290 SUPERFAMILY SSF54862 140 191 1.85E-12 T 22-04-2016 PGJ_RS07420 cd6e9fa8cdc0d098daab79fec3ef3923 290 SUPERFAMILY SSF54862 217 276 1.53E-15 T 22-04-2016 PGJ_RS07420 cd6e9fa8cdc0d098daab79fec3ef3923 290 Pfam PF04060 Putative Fe-S cluster 42 67 3.7E-8 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 PGJ_RS07420 cd6e9fa8cdc0d098daab79fec3ef3923 290 Pfam PF12838 4Fe-4S dicluster domain 140 184 3.8E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PGJ_RS07420 cd6e9fa8cdc0d098daab79fec3ef3923 290 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 248 259 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PGJ_RS07420 cd6e9fa8cdc0d098daab79fec3ef3923 290 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PGJ_RS07420 cd6e9fa8cdc0d098daab79fec3ef3923 290 Gene3D G3DSA:3.30.70.20 178 228 2.8E-11 T 22-04-2016 PGJ_RS07420 cd6e9fa8cdc0d098daab79fec3ef3923 290 Gene3D G3DSA:3.30.70.20 229 271 3.2E-13 T 22-04-2016 PGJ_RS07420 cd6e9fa8cdc0d098daab79fec3ef3923 290 Gene3D G3DSA:3.30.70.20 140 177 5.1E-11 T 22-04-2016 PGJ_RS07420 cd6e9fa8cdc0d098daab79fec3ef3923 290 Pfam PF00037 4Fe-4S binding domain 242 263 6.7E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PGJ_RS08070 c0623f6ed7a808fc50c0bbc98e695a50 394 Pfam PF13635 Domain of unknown function (DUF4143) 264 351 1.7E-12 T 22-04-2016 IPR025420 Domain of unknown function DUF4143 PGJ_RS08070 c0623f6ed7a808fc50c0bbc98e695a50 394 Gene3D G3DSA:3.40.50.300 10 140 7.0E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08070 c0623f6ed7a808fc50c0bbc98e695a50 394 SUPERFAMILY SSF52540 11 176 9.31E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08070 c0623f6ed7a808fc50c0bbc98e695a50 394 PANTHER PTHR33295 1 355 8.5E-35 T 22-04-2016 PGJ_RS08070 c0623f6ed7a808fc50c0bbc98e695a50 394 Pfam PF13173 AAA domain 21 150 2.2E-22 T 22-04-2016 PGJ_RS02255 54c47dd5bb0b0bffcfc7117ff4dd912a 548 PANTHER PTHR30389:SF6 2 546 0.0 T 22-04-2016 PGJ_RS02255 54c47dd5bb0b0bffcfc7117ff4dd912a 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 64 325 2.6E-30 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PGJ_RS02255 54c47dd5bb0b0bffcfc7117ff4dd912a 548 Gene3D G3DSA:3.20.130.10 349 536 7.2E-75 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PGJ_RS02255 54c47dd5bb0b0bffcfc7117ff4dd912a 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 536 1.3E-61 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PGJ_RS02255 54c47dd5bb0b0bffcfc7117ff4dd912a 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 1.5E-86 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PGJ_RS02255 54c47dd5bb0b0bffcfc7117ff4dd912a 548 PIRSF PIRSF001394 30 547 3.4E-229 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PGJ_RS02255 54c47dd5bb0b0bffcfc7117ff4dd912a 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PGJ_RS02255 54c47dd5bb0b0bffcfc7117ff4dd912a 548 PANTHER PTHR30389 2 546 0.0 T 22-04-2016 PGJ_RS02255 54c47dd5bb0b0bffcfc7117ff4dd912a 548 SUPERFAMILY SSF117457 361 535 2.22E-63 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PGJ_RS02255 54c47dd5bb0b0bffcfc7117ff4dd912a 548 Pfam PF05683 Fumarase C-terminus 332 537 1.8E-93 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PGJ_RS00905 5c2c303ec902c742c1dcfce6ac19c884 179 PANTHER PTHR34980 1 164 4.9E-23 T 22-04-2016 PGJ_RS00905 5c2c303ec902c742c1dcfce6ac19c884 179 Pfam PF05656 Protein of unknown function (DUF805) 11 164 9.4E-28 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 PGJ_RS08015 ba1e98f8ecd6f1c7487e79b5213b24ff 551 PANTHER PTHR11059 2 551 3.5E-136 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PGJ_RS08015 ba1e98f8ecd6f1c7487e79b5213b24ff 551 SUPERFAMILY SSF52540 1 199 3.99E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08015 ba1e98f8ecd6f1c7487e79b5213b24ff 551 SUPERFAMILY SSF52540 315 508 3.99E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08015 ba1e98f8ecd6f1c7487e79b5213b24ff 551 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 550 1.2E-137 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PGJ_RS08015 ba1e98f8ecd6f1c7487e79b5213b24ff 551 Gene3D G3DSA:3.40.50.300 338 503 3.0E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08015 ba1e98f8ecd6f1c7487e79b5213b24ff 551 Pfam PF02463 RecF/RecN/SMC N terminal domain 5 509 1.9E-14 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal PGJ_RS08015 ba1e98f8ecd6f1c7487e79b5213b24ff 551 Gene3D G3DSA:3.40.50.300 1 206 9.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08015 ba1e98f8ecd6f1c7487e79b5213b24ff 551 PIRSF PIRSF003128 1 551 1.5E-156 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PGJ_RS03230 7a9f266e1782698161e63aaa3f66751f 409 PANTHER PTHR30349 112 404 2.6E-52 T 22-04-2016 PGJ_RS03230 7a9f266e1782698161e63aaa3f66751f 409 Gene3D G3DSA:1.10.443.10 221 398 1.1E-27 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS03230 7a9f266e1782698161e63aaa3f66751f 409 Pfam PF00589 Phage integrase family 244 387 1.7E-15 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS03230 7a9f266e1782698161e63aaa3f66751f 409 Pfam PF13102 Phage integrase SAM-like domain 11 174 6.0E-24 T 22-04-2016 IPR025269 Phage integrase SAM-like domain PGJ_RS03230 7a9f266e1782698161e63aaa3f66751f 409 PANTHER PTHR30349:SF20 112 404 2.6E-52 T 22-04-2016 PGJ_RS03230 7a9f266e1782698161e63aaa3f66751f 409 SUPERFAMILY SSF56349 127 396 6.77E-40 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS02070 d056e1153f49f45180383a15d907de54 196 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 178 7.0E-73 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PGJ_RS02070 d056e1153f49f45180383a15d907de54 196 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 174 4.0E-99 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PGJ_RS02070 d056e1153f49f45180383a15d907de54 196 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 6.0E-71 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PGJ_RS02070 d056e1153f49f45180383a15d907de54 196 PANTHER PTHR21047 1 179 3.6E-71 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PGJ_RS02070 d056e1153f49f45180383a15d907de54 196 SUPERFAMILY SSF51182 1 181 1.98E-74 T 22-04-2016 IPR011051 RmlC-like cupin domain PGJ_RS02070 d056e1153f49f45180383a15d907de54 196 Gene3D G3DSA:2.60.120.10 1 181 6.4E-77 T 22-04-2016 IPR014710 RmlC-like jelly roll fold PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 50 8.3E-7 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 226 8.3E-7 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 PRINTS PR00987 Glutamyl-tRNA synthetase signature 67 80 8.3E-7 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 SUPERFAMILY SSF50715 347 558 1.88E-69 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 35 344 4.7E-100 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 Gene3D G3DSA:1.10.1160.10 270 345 1.3E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 Gene3D G3DSA:3.90.800.10 107 215 1.3E-42 T 22-04-2016 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 347 539 1.0E-57 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 PANTHER PTHR11451 16 253 1.3E-217 T 22-04-2016 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 PANTHER PTHR11451 274 563 1.3E-217 T 22-04-2016 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 6 559 49.364 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 SUPERFAMILY SSF52374 35 350 9.57E-94 T 22-04-2016 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 PANTHER PTHR11451:SF29 16 253 1.3E-217 T 22-04-2016 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 PANTHER PTHR11451:SF29 274 563 1.3E-217 T 22-04-2016 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 Gene3D G3DSA:3.40.50.620 35 103 1.6E-38 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 Gene3D G3DSA:3.40.50.620 218 269 1.6E-38 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 Gene3D G3DSA:2.40.240.10 355 469 8.1E-47 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 Gene3D G3DSA:2.40.240.10 470 557 2.3E-31 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 PGJ_RS08480 5bca22c267be38520046644ea8ba4480 566 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 35 561 1.3E-211 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 PGJ_RS04535 3534585e0f39ce395670eb83f9ee94d4 271 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 1 264 2.8E-107 T 22-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 PGJ_RS04535 3534585e0f39ce395670eb83f9ee94d4 271 SUPERFAMILY SSF56784 54 248 1.39E-34 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS04535 3534585e0f39ce395670eb83f9ee94d4 271 Gene3D G3DSA:3.40.50.1000 43 251 9.0E-50 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS04535 3534585e0f39ce395670eb83f9ee94d4 271 PANTHER PTHR31284 227 243 1.5E-59 T 22-04-2016 PGJ_RS04535 3534585e0f39ce395670eb83f9ee94d4 271 PANTHER PTHR31284 43 208 1.5E-59 T 22-04-2016 PGJ_RS04535 3534585e0f39ce395670eb83f9ee94d4 271 PIRSF PIRSF019271 1 271 1.8E-92 T 22-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 PGJ_RS04535 3534585e0f39ce395670eb83f9ee94d4 271 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 25 243 1.0E-55 T 22-04-2016 IPR005519 Acid phosphatase, class B-like PGJ_RS04535 3534585e0f39ce395670eb83f9ee94d4 271 PANTHER PTHR31284:SF10 227 243 1.5E-59 T 22-04-2016 PGJ_RS04535 3534585e0f39ce395670eb83f9ee94d4 271 PANTHER PTHR31284:SF10 43 208 1.5E-59 T 22-04-2016 PGJ_RS04705 3a55919070170ccc6080b2dbe211a298 366 Gene3D G3DSA:1.20.59.10 267 355 1.4E-18 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PGJ_RS04705 3a55919070170ccc6080b2dbe211a298 366 PANTHER PTHR21057 18 275 1.1E-67 T 22-04-2016 PGJ_RS04705 3a55919070170ccc6080b2dbe211a298 366 Pfam PF00793 DAHP synthetase I family 17 253 2.4E-31 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PGJ_RS04705 3a55919070170ccc6080b2dbe211a298 366 SMART SM00830 275 355 4.7E-21 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PGJ_RS04705 3a55919070170ccc6080b2dbe211a298 366 Gene3D G3DSA:3.20.20.70 16 259 2.3E-55 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS04705 3a55919070170ccc6080b2dbe211a298 366 PANTHER PTHR21057:SF7 18 275 1.1E-67 T 22-04-2016 PGJ_RS04705 3a55919070170ccc6080b2dbe211a298 366 SUPERFAMILY SSF48600 266 352 3.66E-19 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PGJ_RS04705 3a55919070170ccc6080b2dbe211a298 366 Pfam PF01817 Chorismate mutase type II 275 352 1.1E-17 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PGJ_RS04705 3a55919070170ccc6080b2dbe211a298 366 SUPERFAMILY SSF51569 7 264 2.29E-59 T 22-04-2016 PGJ_RS09715 393e15d7ef51dcb88ba3bf5e39e74af8 256 SUPERFAMILY SSF64167 7 253 3.92E-68 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PGJ_RS09715 393e15d7ef51dcb88ba3bf5e39e74af8 256 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 7 240 7.8E-51 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PGJ_RS09715 393e15d7ef51dcb88ba3bf5e39e74af8 256 Gene3D G3DSA:3.40.1210.10 7 254 2.2E-71 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PGJ_RS09715 393e15d7ef51dcb88ba3bf5e39e74af8 256 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 6 256 29.378 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PGJ_RS09715 393e15d7ef51dcb88ba3bf5e39e74af8 256 Pfam PF01975 Survival protein SurE 8 181 3.6E-48 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PGJ_RS09715 393e15d7ef51dcb88ba3bf5e39e74af8 256 PANTHER PTHR30457 6 252 1.6E-61 T 22-04-2016 PGJ_RS07605 7c122ec1725be814c7549d9b6ccb2097 261 SMART SM00358 178 243 9.2E-16 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain PGJ_RS07605 7c122ec1725be814c7549d9b6ccb2097 261 Gene3D G3DSA:3.30.160.20 176 243 1.1E-18 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain PGJ_RS07605 7c122ec1725be814c7549d9b6ccb2097 261 ProSitePatterns PS00517 Ribonuclease III family signature. 62 70 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PGJ_RS07605 7c122ec1725be814c7549d9b6ccb2097 261 Gene3D G3DSA:1.10.1520.10 26 167 3.0E-37 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PGJ_RS07605 7c122ec1725be814c7549d9b6ccb2097 261 SUPERFAMILY SSF54768 173 256 1.52E-20 T 22-04-2016 PGJ_RS07605 7c122ec1725be814c7549d9b6ccb2097 261 SMART SM00535 38 169 3.8E-29 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PGJ_RS07605 7c122ec1725be814c7549d9b6ccb2097 261 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 28 242 3.5E-60 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 PGJ_RS07605 7c122ec1725be814c7549d9b6ccb2097 261 SUPERFAMILY SSF69065 23 166 4.19E-37 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PGJ_RS07605 7c122ec1725be814c7549d9b6ccb2097 261 PANTHER PTHR11207 26 243 8.0E-54 T 22-04-2016 PGJ_RS07605 7c122ec1725be814c7549d9b6ccb2097 261 Pfam PF14622 Ribonuclease-III-like 40 161 1.0E-25 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PGJ_RS07605 7c122ec1725be814c7549d9b6ccb2097 261 Hamap MF_00104 Ribonuclease 3 [rnc]. 26 239 23.046 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 PGJ_RS07605 7c122ec1725be814c7549d9b6ccb2097 261 Pfam PF00035 Double-stranded RNA binding motif 178 242 8.1E-17 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain PGJ_RS06850 e43949b5244c766d7c9cc9af1db427ae 355 Gene3D G3DSA:2.130.10.10 72 354 1.4E-5 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PGJ_RS06850 e43949b5244c766d7c9cc9af1db427ae 355 SUPERFAMILY SSF50969 71 247 2.71E-8 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PGJ_RS06850 e43949b5244c766d7c9cc9af1db427ae 355 SUPERFAMILY SSF50969 275 355 2.71E-8 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PGJ_RS05365 6a9a9e72c5ff64b2963dd2987baa708a 179 SMART SM00855 2 148 5.7E-13 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PGJ_RS05365 6a9a9e72c5ff64b2963dd2987baa708a 179 Gene3D G3DSA:3.40.50.1240 1 177 2.3E-30 T 22-04-2016 IPR029033 Histidine phosphatase superfamily PGJ_RS05365 6a9a9e72c5ff64b2963dd2987baa708a 179 PANTHER PTHR23029:SF1 1 145 5.9E-18 T 22-04-2016 PGJ_RS05365 6a9a9e72c5ff64b2963dd2987baa708a 179 PANTHER PTHR23029 1 145 5.9E-18 T 22-04-2016 PGJ_RS05365 6a9a9e72c5ff64b2963dd2987baa708a 179 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 173 2.9E-53 T 22-04-2016 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PGJ_RS05365 6a9a9e72c5ff64b2963dd2987baa708a 179 SUPERFAMILY SSF53254 1 174 2.57E-34 T 22-04-2016 IPR029033 Histidine phosphatase superfamily PGJ_RS05365 6a9a9e72c5ff64b2963dd2987baa708a 179 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 177 7.8E-27 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PGJ_RS03555 3b4c4e05ed826c301910030fd6040e1c 220 PANTHER PTHR13707 6 220 9.5E-119 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PGJ_RS03555 3b4c4e05ed826c301910030fd6040e1c 220 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 210 1.1E-92 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 PGJ_RS03555 3b4c4e05ed826c301910030fd6040e1c 220 SUPERFAMILY SSF100950 5 217 7.96E-71 T 22-04-2016 PGJ_RS03555 3b4c4e05ed826c301910030fd6040e1c 220 Gene3D G3DSA:3.40.810.20 6 214 2.0E-87 T 22-04-2016 PGJ_RS03555 3b4c4e05ed826c301910030fd6040e1c 220 SMART SM00882 8 204 4.3E-71 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PGJ_RS03555 3b4c4e05ed826c301910030fd6040e1c 220 Pfam PF01144 Coenzyme A transferase 9 203 4.5E-38 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PGJ_RS07180 b5ef9d4e0774d08da364bd8b6e11bd6a 151 SUPERFAMILY SSF54893 2 99 2.22E-32 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal PGJ_RS07180 b5ef9d4e0774d08da364bd8b6e11bd6a 151 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 8 98 1.0E-45 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal PGJ_RS07180 b5ef9d4e0774d08da364bd8b6e11bd6a 151 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 3 150 32.234 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 PGJ_RS07180 b5ef9d4e0774d08da364bd8b6e11bd6a 151 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 4 148 1.4E-48 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 PGJ_RS07180 b5ef9d4e0774d08da364bd8b6e11bd6a 151 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 4.1E-32 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal PGJ_RS07180 b5ef9d4e0774d08da364bd8b6e11bd6a 151 SUPERFAMILY SSF57825 101 148 2.35E-15 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal PGJ_RS07180 b5ef9d4e0774d08da364bd8b6e11bd6a 151 PANTHER PTHR35805:SF1 1 151 5.1E-58 T 22-04-2016 PGJ_RS07180 b5ef9d4e0774d08da364bd8b6e11bd6a 151 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 101 148 4.6E-20 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal PGJ_RS07180 b5ef9d4e0774d08da364bd8b6e11bd6a 151 Gene3D G3DSA:3.30.70.140 1 97 1.5E-35 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal PGJ_RS07180 b5ef9d4e0774d08da364bd8b6e11bd6a 151 PANTHER PTHR35805 1 151 5.1E-58 T 22-04-2016 PGJ_RS07180 b5ef9d4e0774d08da364bd8b6e11bd6a 151 Gene3D G3DSA:2.30.30.20 99 148 4.7E-21 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal PGJ_RS04795 4ce2cbca7faa5081aab16f72e59edc52 310 Gene3D G3DSA:1.10.443.10 111 301 7.9E-41 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS04795 4ce2cbca7faa5081aab16f72e59edc52 310 Pfam PF00589 Phage integrase family 118 294 8.5E-32 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS04795 4ce2cbca7faa5081aab16f72e59edc52 310 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 7 51 1.1E-5 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PGJ_RS04795 4ce2cbca7faa5081aab16f72e59edc52 310 SUPERFAMILY SSF56349 7 303 2.21E-52 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS04795 4ce2cbca7faa5081aab16f72e59edc52 310 Gene3D G3DSA:1.10.150.130 7 87 1.0E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal PGJ_RS04795 4ce2cbca7faa5081aab16f72e59edc52 310 PANTHER PTHR30349 7 309 2.3E-44 T 22-04-2016 PGJ_RS04795 4ce2cbca7faa5081aab16f72e59edc52 310 PANTHER PTHR30349:SF20 7 309 2.3E-44 T 22-04-2016 PGJ_RS01835 c098593046b9eea232ee47a29ec322c3 194 Pfam PF01725 Ham1 family 4 188 3.7E-54 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PGJ_RS01835 c098593046b9eea232ee47a29ec322c3 194 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 192 48.122 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PGJ_RS01835 c098593046b9eea232ee47a29ec322c3 194 SUPERFAMILY SSF52972 1 190 6.54E-62 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PGJ_RS01835 c098593046b9eea232ee47a29ec322c3 194 Gene3D G3DSA:3.90.950.10 1 190 1.6E-68 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PGJ_RS01835 c098593046b9eea232ee47a29ec322c3 194 PANTHER PTHR11067 1 191 8.1E-67 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PGJ_RS01835 c098593046b9eea232ee47a29ec322c3 194 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 190 3.2E-52 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PGJ_RS01835 c098593046b9eea232ee47a29ec322c3 194 PANTHER PTHR11067:SF9 1 191 8.1E-67 T 22-04-2016 PGJ_RS08010 cbb57d0587de068fad3bdec90d4d1446 249 SMART SM00967 6 80 5.8E-16 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 PGJ_RS08010 cbb57d0587de068fad3bdec90d4d1446 249 SUPERFAMILY SSF55315 1 75 7.53E-13 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like PGJ_RS08010 cbb57d0587de068fad3bdec90d4d1446 249 PANTHER PTHR12029 6 244 2.6E-71 T 22-04-2016 PGJ_RS08010 cbb57d0587de068fad3bdec90d4d1446 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 79 9.1E-18 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 PGJ_RS08010 cbb57d0587de068fad3bdec90d4d1446 249 Gene3D G3DSA:3.30.1330.30 1 73 5.9E-17 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like PGJ_RS08010 cbb57d0587de068fad3bdec90d4d1446 249 Gene3D G3DSA:3.40.1280.10 92 246 6.2E-44 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PGJ_RS08010 cbb57d0587de068fad3bdec90d4d1446 249 Pfam PF00588 SpoU rRNA Methylase family 97 237 3.8E-32 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PGJ_RS08010 cbb57d0587de068fad3bdec90d4d1446 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 242 1.3E-58 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 PGJ_RS08010 cbb57d0587de068fad3bdec90d4d1446 249 SUPERFAMILY SSF75217 68 245 2.16E-42 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PGJ_RS01175 d02a27d5850dd705c41c814912f92541 447 Pfam PF01458 Uncharacterized protein family (UPF0051) 185 408 7.0E-70 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 PGJ_RS01175 d02a27d5850dd705c41c814912f92541 447 PANTHER PTHR30508 1 444 2.2E-116 T 22-04-2016 PGJ_RS01175 d02a27d5850dd705c41c814912f92541 447 SUPERFAMILY SSF101960 18 434 1.44E-100 T 22-04-2016 PGJ_RS01175 d02a27d5850dd705c41c814912f92541 447 PANTHER PTHR30508:SF0 1 444 2.2E-116 T 22-04-2016 PGJ_RS01175 d02a27d5850dd705c41c814912f92541 447 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 151 425 4.6E-74 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 PGJ_RS02465 03f34b744354173dd3cef5a1bdf32dd4 434 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 6.2E-59 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PGJ_RS02465 03f34b744354173dd3cef5a1bdf32dd4 434 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 434 33.903 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS02465 03f34b744354173dd3cef5a1bdf32dd4 434 PANTHER PTHR21090 1 434 4.6E-125 T 22-04-2016 PGJ_RS02465 03f34b744354173dd3cef5a1bdf32dd4 434 Gene3D G3DSA:3.65.10.10 228 433 1.2E-43 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PGJ_RS02465 03f34b744354173dd3cef5a1bdf32dd4 434 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 433 2.0E-132 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS02465 03f34b744354173dd3cef5a1bdf32dd4 434 Gene3D G3DSA:3.65.10.10 21 227 1.3E-52 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PGJ_RS02465 03f34b744354173dd3cef5a1bdf32dd4 434 SUPERFAMILY SSF55205 1 433 1.64E-99 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PGJ_RS02465 03f34b744354173dd3cef5a1bdf32dd4 434 PANTHER PTHR21090:SF4 1 434 4.6E-125 T 22-04-2016 PGJ_RS02435 8c756ca68bb11a3ec5c75b0b134e5dc6 473 Gene3D G3DSA:1.25.40.10 32 114 5.8E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS02435 8c756ca68bb11a3ec5c75b0b134e5dc6 473 Pfam PF07676 WD40-like Beta Propeller Repeat 227 262 6.0E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller PGJ_RS02435 8c756ca68bb11a3ec5c75b0b134e5dc6 473 SUPERFAMILY SSF48452 32 113 1.38E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS02435 8c756ca68bb11a3ec5c75b0b134e5dc6 473 Pfam PF13432 Tetratricopeptide repeat 30 87 4.7E-10 T 22-04-2016 PGJ_RS06910 62747091793c26c8fe05dc207398e752 285 PANTHER PTHR39200:SF1 1 242 8.0E-26 T 22-04-2016 PGJ_RS06910 62747091793c26c8fe05dc207398e752 285 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 171 267 2.0E-16 T 22-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain PGJ_RS06910 62747091793c26c8fe05dc207398e752 285 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 45 166 1.3E-22 T 22-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain PGJ_RS06910 62747091793c26c8fe05dc207398e752 285 PANTHER PTHR39200 1 242 8.0E-26 T 22-04-2016 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 186 326 4.2E-47 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 SUPERFAMILY SSF51735 6 186 2.06E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 Gene3D G3DSA:1.10.1040.10 190 331 1.3E-46 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 194 215 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 164 2.6E-30 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 PANTHER PTHR11728 6 329 3.3E-84 T 22-04-2016 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 PIRSF PIRSF000114 1 334 2.3E-91 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 PANTHER PTHR11728:SF1 6 329 3.3E-84 T 22-04-2016 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 179 203 2.8E-29 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 9 26 2.8E-29 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 244 261 2.8E-29 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 62 89 2.8E-29 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 139 159 2.8E-29 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 204 228 2.8E-29 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 Gene3D G3DSA:3.40.50.720 6 189 1.0E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02450 f11e3ba9afa68d734b7bbf8563621f15 334 SUPERFAMILY SSF48179 185 332 3.91E-44 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PGJ_RS07075 697cac77de16f3b0726a8e5f278b160c 400 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 306 400 1.1E-19 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PGJ_RS07075 697cac77de16f3b0726a8e5f278b160c 400 Gene3D G3DSA:1.10.150.130 6 101 1.5E-21 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal PGJ_RS07075 697cac77de16f3b0726a8e5f278b160c 400 SUPERFAMILY SSF56349 8 291 9.42E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS07075 697cac77de16f3b0726a8e5f278b160c 400 Pfam PF00589 Phage integrase family 119 283 1.9E-35 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS07075 697cac77de16f3b0726a8e5f278b160c 400 Gene3D G3DSA:1.10.443.10 118 291 1.4E-44 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS07075 697cac77de16f3b0726a8e5f278b160c 400 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 297 27.526 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD PGJ_RS07075 697cac77de16f3b0726a8e5f278b160c 400 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 306 400 7.4E-12 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PGJ_RS07075 697cac77de16f3b0726a8e5f278b160c 400 Gene3D G3DSA:3.30.160.100 305 400 8.3E-23 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PGJ_RS07075 697cac77de16f3b0726a8e5f278b160c 400 PANTHER PTHR30349:SF5 6 311 4.7E-74 T 22-04-2016 PGJ_RS07075 697cac77de16f3b0726a8e5f278b160c 400 PANTHER PTHR30349 6 311 4.7E-74 T 22-04-2016 PGJ_RS07075 697cac77de16f3b0726a8e5f278b160c 400 SUPERFAMILY SSF69754 305 396 6.15E-21 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PGJ_RS07075 697cac77de16f3b0726a8e5f278b160c 400 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 5.4E-13 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PGJ_RS05910 a9af91b0f67acf9fbeea5fac0d6cae99 346 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 10 340 2.8E-110 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PGJ_RS05910 a9af91b0f67acf9fbeea5fac0d6cae99 346 SUPERFAMILY SSF56042 153 323 2.54E-32 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS05910 a9af91b0f67acf9fbeea5fac0d6cae99 346 PANTHER PTHR30270 3 346 1.7E-113 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PGJ_RS05910 a9af91b0f67acf9fbeea5fac0d6cae99 346 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 9 338 28.239 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PGJ_RS05910 a9af91b0f67acf9fbeea5fac0d6cae99 346 PIRSF PIRSF005303 4 341 3.0E-104 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PGJ_RS05910 a9af91b0f67acf9fbeea5fac0d6cae99 346 SUPERFAMILY SSF55326 6 148 1.92E-33 T 22-04-2016 PGJ_RS05910 a9af91b0f67acf9fbeea5fac0d6cae99 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 35 147 4.2E-20 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PGJ_RS05910 a9af91b0f67acf9fbeea5fac0d6cae99 346 PANTHER PTHR30270:SF0 3 346 1.7E-113 T 22-04-2016 PGJ_RS05910 a9af91b0f67acf9fbeea5fac0d6cae99 346 Gene3D G3DSA:3.30.1330.10 4 150 1.4E-38 T 22-04-2016 IPR016188 PurM-like, N-terminal domain PGJ_RS05910 a9af91b0f67acf9fbeea5fac0d6cae99 346 Gene3D G3DSA:3.90.650.10 155 339 1.0E-47 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS05910 a9af91b0f67acf9fbeea5fac0d6cae99 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 217 278 5.4E-5 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PGJ_RS03580 5f17834f43f6c848a62e3bdb460b4821 281 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 183 279 1.3E-36 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PGJ_RS03580 5f17834f43f6c848a62e3bdb460b4821 281 PIRSF PIRSF000105 1 281 8.2E-84 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 PGJ_RS03580 5f17834f43f6c848a62e3bdb460b4821 281 SUPERFAMILY SSF51735 2 181 5.34E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03580 5f17834f43f6c848a62e3bdb460b4821 281 PANTHER PTHR23309 2 281 2.1E-134 T 22-04-2016 PGJ_RS03580 5f17834f43f6c848a62e3bdb460b4821 281 Gene3D G3DSA:1.10.1040.10 185 280 1.6E-36 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PGJ_RS03580 5f17834f43f6c848a62e3bdb460b4821 281 SUPERFAMILY SSF48179 182 281 7.23E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PGJ_RS03580 5f17834f43f6c848a62e3bdb460b4821 281 Gene3D G3DSA:3.40.50.720 1 184 3.1E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03580 5f17834f43f6c848a62e3bdb460b4821 281 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 180 205 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PGJ_RS03580 5f17834f43f6c848a62e3bdb460b4821 281 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2 180 4.7E-61 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PGJ_RS07400 f070f7a376147b214c55c5a82e5ec2d7 196 PANTHER PTHR30586 1 196 2.4E-107 T 22-04-2016 PGJ_RS07400 f070f7a376147b214c55c5a82e5ec2d7 196 PIRSF PIRSF006102 1 196 6.3E-74 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PGJ_RS07400 f070f7a376147b214c55c5a82e5ec2d7 196 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 186 2.3E-67 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PGJ_RS07400 f070f7a376147b214c55c5a82e5ec2d7 196 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 196 26.981 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 PGJ_RS07400 f070f7a376147b214c55c5a82e5ec2d7 196 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 195 2.8E-86 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 PGJ_RS05680 0b3633a5609901e2cc436ac02430f0b0 828 PANTHER PTHR38467 2 828 1.1E-281 T 22-04-2016 PGJ_RS05680 0b3633a5609901e2cc436ac02430f0b0 828 Pfam PF12991 Domain of unknown function, B. Theta Gene description (DUF3875) 3 55 5.4E-25 T 22-04-2016 IPR024451 Domain of unknown function DUF3875 PGJ_RS05680 0b3633a5609901e2cc436ac02430f0b0 828 Gene3D G3DSA:3.40.50.300 621 734 5.9E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05680 0b3633a5609901e2cc436ac02430f0b0 828 Gene3D G3DSA:3.40.50.300 418 515 5.9E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05680 0b3633a5609901e2cc436ac02430f0b0 828 SUPERFAMILY SSF52540 415 733 6.35E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05680 0b3633a5609901e2cc436ac02430f0b0 828 TIGRFAM TIGR03783 Bac_Flav_CT_G: Bacteroides conjugation system ATPase, TraG family 1 827 0.0 T 22-04-2016 IPR022509 Conjugation system ATPase, TraG PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 SUPERFAMILY SSF51306 85 124 4.71E-50 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 SUPERFAMILY SSF51306 211 317 4.71E-50 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 SUPERFAMILY SSF51306 392 461 4.71E-50 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 SUPERFAMILY SSF51306 151 170 4.71E-50 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 ProSitePatterns PS00761 Signal peptidases I signature 3. 407 420 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 PANTHER PTHR12383:SF14 155 169 5.0E-43 T 22-04-2016 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 PANTHER PTHR12383:SF14 214 263 5.0E-43 T 22-04-2016 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 PANTHER PTHR12383:SF14 384 448 5.0E-43 T 22-04-2016 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 PANTHER PTHR12383:SF14 59 118 5.0E-43 T 22-04-2016 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 Gene3D G3DSA:2.10.109.10 402 451 3.5E-49 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 Gene3D G3DSA:2.10.109.10 83 169 3.5E-49 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 Gene3D G3DSA:2.10.109.10 210 226 3.5E-49 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 405 442 5.3E-13 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 72 249 3.1E-17 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 PANTHER PTHR12383 155 169 5.0E-43 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 PANTHER PTHR12383 214 263 5.0E-43 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 PANTHER PTHR12383 384 448 5.0E-43 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 PANTHER PTHR12383 59 118 5.0E-43 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 Pfam PF10502 Signal peptidase, peptidase S26 399 439 9.3E-5 T 22-04-2016 IPR019533 Peptidase S26 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 Pfam PF00717 Peptidase S24-like 93 178 1.1E-5 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 86 102 5.2E-9 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS08670 06ed45d1afedb6bc3892b8d6c596db00 465 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 402 421 5.2E-9 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS09330 622f168ca3f3f363b3c022204a32f15c 330 Gene3D G3DSA:3.20.20.70 14 318 9.5E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS09330 622f168ca3f3f363b3c022204a32f15c 330 SUPERFAMILY SSF102114 13 316 4.05E-71 T 22-04-2016 PGJ_RS09330 622f168ca3f3f363b3c022204a32f15c 330 PANTHER PTHR22976 1 318 5.8E-108 T 22-04-2016 PGJ_RS09330 622f168ca3f3f363b3c022204a32f15c 330 Pfam PF04055 Radical SAM superfamily 60 218 7.1E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS09330 622f168ca3f3f363b3c022204a32f15c 330 PANTHER PTHR22976:SF1 1 318 5.8E-108 T 22-04-2016 PGJ_RS09330 622f168ca3f3f363b3c022204a32f15c 330 Hamap MF_01694 Biotin synthase [bioB]. 13 319 38.873 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PGJ_RS09330 622f168ca3f3f363b3c022204a32f15c 330 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 227 317 2.9E-12 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PGJ_RS09330 622f168ca3f3f363b3c022204a32f15c 330 SMART SM00876 227 318 1.0E-29 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PGJ_RS09330 622f168ca3f3f363b3c022204a32f15c 330 SMART SM00729 51 256 5.4E-27 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PGJ_RS09330 622f168ca3f3f363b3c022204a32f15c 330 TIGRFAM TIGR00433 bioB: biotin synthase 25 317 8.6E-117 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PGJ_RS09330 622f168ca3f3f363b3c022204a32f15c 330 PIRSF PIRSF001619 1 324 1.0E-96 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PGJ_RS01185 2e7764680f46677ac9039a45b32e6668 355 Pfam PF13641 Glycosyltransferase like family 2 3 234 2.5E-23 T 22-04-2016 PGJ_RS01185 2e7764680f46677ac9039a45b32e6668 355 PANTHER PTHR22916 166 270 9.4E-52 T 22-04-2016 PGJ_RS01185 2e7764680f46677ac9039a45b32e6668 355 PANTHER PTHR22916 3 139 9.4E-52 T 22-04-2016 PGJ_RS01185 2e7764680f46677ac9039a45b32e6668 355 Gene3D G3DSA:3.90.550.10 1 256 1.2E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS01185 2e7764680f46677ac9039a45b32e6668 355 SUPERFAMILY SSF53448 1 265 2.56E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS01185 2e7764680f46677ac9039a45b32e6668 355 PANTHER PTHR22916:SF9 166 270 9.4E-52 T 22-04-2016 PGJ_RS01185 2e7764680f46677ac9039a45b32e6668 355 PANTHER PTHR22916:SF9 3 139 9.4E-52 T 22-04-2016 PGJ_RS03180 68e4321fbc120c53406485ddffa40d1a 316 SUPERFAMILY SSF57783 8 91 1.63E-15 T 22-04-2016 PGJ_RS03180 68e4321fbc120c53406485ddffa40d1a 316 Gene3D G3DSA:3.90.580.10 8 91 3.5E-14 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PGJ_RS03180 68e4321fbc120c53406485ddffa40d1a 316 Gene3D G3DSA:3.40.1360.10 201 303 6.3E-14 T 22-04-2016 PGJ_RS03180 68e4321fbc120c53406485ddffa40d1a 316 SUPERFAMILY SSF56731 205 300 9.68E-5 T 22-04-2016 PGJ_RS03180 68e4321fbc120c53406485ddffa40d1a 316 Pfam PF13155 Toprim-like 205 293 3.8E-12 T 22-04-2016 PGJ_RS08100 4a25031b906ddb4ab1e21ad47487bb98 659 Pfam PF01175 Urocanase 79 632 2.4E-235 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PGJ_RS08100 4a25031b906ddb4ab1e21ad47487bb98 659 PANTHER PTHR12216:SF3 9 659 0.0 T 22-04-2016 PGJ_RS08100 4a25031b906ddb4ab1e21ad47487bb98 659 ProSitePatterns PS01233 Urocanase signature. 528 543 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PGJ_RS08100 4a25031b906ddb4ab1e21ad47487bb98 659 Hamap MF_00577 Urocanate hydratase [hutU]. 49 648 42.928 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PGJ_RS08100 4a25031b906ddb4ab1e21ad47487bb98 659 SUPERFAMILY SSF111326 70 638 8.37E-224 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PGJ_RS08100 4a25031b906ddb4ab1e21ad47487bb98 659 PANTHER PTHR12216 9 659 0.0 T 22-04-2016 PGJ_RS08100 4a25031b906ddb4ab1e21ad47487bb98 659 TIGRFAM TIGR01228 hutU: urocanate hydratase 83 633 3.5E-131 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PGJ_RS08100 4a25031b906ddb4ab1e21ad47487bb98 659 Gene3D G3DSA:3.40.50.10730 208 430 1.5E-81 T 22-04-2016 PGJ_RS08100 4a25031b906ddb4ab1e21ad47487bb98 659 Gene3D G3DSA:3.40.1770.10 442 636 1.3E-149 T 22-04-2016 PGJ_RS08100 4a25031b906ddb4ab1e21ad47487bb98 659 Gene3D G3DSA:3.40.1770.10 73 207 1.3E-149 T 22-04-2016 PGJ_RS08100 4a25031b906ddb4ab1e21ad47487bb98 659 PIRSF PIRSF001423 70 647 2.0E-177 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PGJ_RS07710 746dd101da9d4010f708013ac5128fa9 236 Pfam PF00535 Glycosyl transferase family 2 5 151 8.6E-12 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PGJ_RS07710 746dd101da9d4010f708013ac5128fa9 236 PANTHER PTHR10859:SF95 3 236 1.0E-20 T 22-04-2016 PGJ_RS07710 746dd101da9d4010f708013ac5128fa9 236 PANTHER PTHR10859 3 236 1.0E-20 T 22-04-2016 PGJ_RS07710 746dd101da9d4010f708013ac5128fa9 236 SUPERFAMILY SSF53448 1 202 2.81E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS07710 746dd101da9d4010f708013ac5128fa9 236 Gene3D G3DSA:3.90.550.10 3 126 5.4E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS01295 74530b1dae4e08900696f0a509205fc4 167 PANTHER PTHR10681 12 167 8.0E-49 T 22-04-2016 PGJ_RS01295 74530b1dae4e08900696f0a509205fc4 167 Gene3D G3DSA:3.40.30.10 3 167 1.5E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS01295 74530b1dae4e08900696f0a509205fc4 167 SUPERFAMILY SSF52833 4 164 1.19E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS01295 74530b1dae4e08900696f0a509205fc4 167 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 167 36.984 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 PGJ_RS01295 74530b1dae4e08900696f0a509205fc4 167 Pfam PF08534 Redoxin 21 163 4.8E-27 T 22-04-2016 IPR013740 Redoxin GO:0016491 PGJ_RS01295 74530b1dae4e08900696f0a509205fc4 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 PGJ_RS01295 74530b1dae4e08900696f0a509205fc4 167 PANTHER PTHR10681:SF81 12 167 8.0E-49 T 22-04-2016 PGJ_RS08030 ec285d59bd4eaae768f02aa787c04571 259 PANTHER PTHR30231:SF9 1 251 1.0E-105 T 22-04-2016 PGJ_RS08030 ec285d59bd4eaae768f02aa787c04571 259 Pfam PF00929 Exonuclease 10 165 4.3E-22 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PGJ_RS08030 ec285d59bd4eaae768f02aa787c04571 259 SMART SM00479 8 174 2.7E-31 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PGJ_RS08030 ec285d59bd4eaae768f02aa787c04571 259 Gene3D G3DSA:3.30.420.10 7 173 2.3E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS08030 ec285d59bd4eaae768f02aa787c04571 259 SUPERFAMILY SSF53098 6 181 9.04E-53 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS08030 ec285d59bd4eaae768f02aa787c04571 259 PANTHER PTHR30231 1 251 1.0E-105 T 22-04-2016 PGJ_RS07905 8665337dd085453d687f1c8f16a40dd8 203 Gene3D G3DSA:1.10.3820.10 21 173 9.9E-24 T 22-04-2016 PGJ_RS07905 8665337dd085453d687f1c8f16a40dd8 203 TIGRFAM TIGR03153 cytochr_NrfH: cytochrome c nitrite reductase, small subunit 27 170 2.4E-55 T 22-04-2016 IPR017571 Cytochrome c nitrite reductase, small subunit GO:0016021|GO:0022900 PGJ_RS07905 8665337dd085453d687f1c8f16a40dd8 203 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 22 170 6.5E-19 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal PGJ_RS07905 8665337dd085453d687f1c8f16a40dd8 203 PANTHER PTHR30333 1 199 2.2E-39 T 22-04-2016 PGJ_RS07905 8665337dd085453d687f1c8f16a40dd8 203 SUPERFAMILY SSF48695 27 170 2.48E-28 T 22-04-2016 IPR011031 Multihaem cytochrome PGJ_RS06100 3329e3bd4c360de2384c8420f0ad5ced 85 Pfam PF01197 Ribosomal protein L31 1 79 6.8E-29 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06100 3329e3bd4c360de2384c8420f0ad5ced 85 SUPERFAMILY SSF143800 1 79 1.02E-20 T 22-04-2016 PGJ_RS06100 3329e3bd4c360de2384c8420f0ad5ced 85 PANTHER PTHR33280:SF2 1 84 3.9E-33 T 22-04-2016 PGJ_RS06100 3329e3bd4c360de2384c8420f0ad5ced 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.4E-20 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06100 3329e3bd4c360de2384c8420f0ad5ced 85 PANTHER PTHR33280 1 84 3.9E-33 T 22-04-2016 PGJ_RS06100 3329e3bd4c360de2384c8420f0ad5ced 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 23.42 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06100 3329e3bd4c360de2384c8420f0ad5ced 85 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06100 3329e3bd4c360de2384c8420f0ad5ced 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-14 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06100 3329e3bd4c360de2384c8420f0ad5ced 85 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.0E-14 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06100 3329e3bd4c360de2384c8420f0ad5ced 85 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.0E-14 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS09180 04f1f1cda28b89ea250df55b717a42b5 223 PRINTS PR01021 OMPA domain signature 152 168 9.6E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PGJ_RS09180 04f1f1cda28b89ea250df55b717a42b5 223 PRINTS PR01021 OMPA domain signature 107 129 9.6E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PGJ_RS09180 04f1f1cda28b89ea250df55b717a42b5 223 PRINTS PR01021 OMPA domain signature 137 152 9.6E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PGJ_RS09180 04f1f1cda28b89ea250df55b717a42b5 223 Gene3D G3DSA:3.30.1330.60 95 209 2.4E-40 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS09180 04f1f1cda28b89ea250df55b717a42b5 223 PANTHER PTHR30128 54 209 8.3E-43 T 22-04-2016 PGJ_RS09180 04f1f1cda28b89ea250df55b717a42b5 223 Pfam PF13488 Glycine zipper 31 75 5.6E-11 T 22-04-2016 PGJ_RS09180 04f1f1cda28b89ea250df55b717a42b5 223 Pfam PF00691 OmpA family 106 201 9.5E-22 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS09180 04f1f1cda28b89ea250df55b717a42b5 223 SUPERFAMILY SSF103088 95 209 2.22E-37 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS09180 04f1f1cda28b89ea250df55b717a42b5 223 ProSitePatterns PS01068 OmpA-like domain. 139 183 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 Hamap MF_01454 GTPase Obg [obg]. 6 330 45.672 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 Pfam PF01018 GTP1/OBG 7 162 3.2E-59 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 ProSitePatterns PS00905 GTP1/OBG family signature. 217 230 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 PANTHER PTHR11702:SF3 356 394 7.3E-150 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 PANTHER PTHR11702:SF3 1 338 7.3E-150 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 Gene3D G3DSA:2.70.210.12 6 159 4.7E-55 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 SUPERFAMILY SSF52540 157 336 1.22E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 SUPERFAMILY SSF82051 6 162 1.29E-53 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 Pfam PF01926 50S ribosome-binding GTPase 165 285 9.0E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 7 329 4.9E-133 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 215 230 1.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 232 250 1.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 187 205 1.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 166 186 1.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 Gene3D G3DSA:3.40.50.300 164 336 2.9E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 PANTHER PTHR11702 356 394 7.3E-150 T 22-04-2016 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 PANTHER PTHR11702 1 338 7.3E-150 T 22-04-2016 PGJ_RS04995 107530ac6a79111b83cbe78946c2976c 394 PIRSF PIRSF002401 4 375 9.4E-135 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PGJ_RS09020 35cfa2f7550b9ea8f7965c49462288c9 152 Gene3D G3DSA:1.10.8.330 1 68 1.9E-26 T 22-04-2016 PGJ_RS09020 35cfa2f7550b9ea8f7965c49462288c9 152 SUPERFAMILY SSF140753 2 148 3.14E-60 T 22-04-2016 PGJ_RS09020 35cfa2f7550b9ea8f7965c49462288c9 152 Gene3D G3DSA:1.10.8.340 69 146 3.9E-28 T 22-04-2016 PGJ_RS09020 35cfa2f7550b9ea8f7965c49462288c9 152 Pfam PF08989 Domain of unknown function (DUF1896) 4 146 2.2E-54 T 22-04-2016 IPR015082 Protein of unknown function DUF1896 PGJ_RS08445 7e0b67c612ed86c6d1ec13af6a8271a6 1160 SMART SM00028 364 397 48.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS08445 7e0b67c612ed86c6d1ec13af6a8271a6 1160 SMART SM00028 642 675 260.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS08445 7e0b67c612ed86c6d1ec13af6a8271a6 1160 SMART SM00028 253 286 0.004 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS08445 7e0b67c612ed86c6d1ec13af6a8271a6 1160 SMART SM00028 604 638 49.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS08445 7e0b67c612ed86c6d1ec13af6a8271a6 1160 Gene3D G3DSA:1.25.40.10 580 709 2.2E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS08445 7e0b67c612ed86c6d1ec13af6a8271a6 1160 Gene3D G3DSA:1.25.40.10 329 405 2.2E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS08445 7e0b67c612ed86c6d1ec13af6a8271a6 1160 Gene3D G3DSA:1.25.40.10 143 284 6.7E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS08445 7e0b67c612ed86c6d1ec13af6a8271a6 1160 SUPERFAMILY SSF48452 317 401 9.48E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS08445 7e0b67c612ed86c6d1ec13af6a8271a6 1160 SUPERFAMILY SSF48452 603 710 9.48E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS08445 7e0b67c612ed86c6d1ec13af6a8271a6 1160 Pfam PF13432 Tetratricopeptide repeat 229 284 1.2E-6 T 22-04-2016 PGJ_RS08445 7e0b67c612ed86c6d1ec13af6a8271a6 1160 SUPERFAMILY SSF48452 140 288 5.06E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07975 97d920cf1ead9d7462313199bf23fd1c 1712 Pfam PF07675 Cleaved Adhesin Domain 231 407 2.8E-80 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS07975 97d920cf1ead9d7462313199bf23fd1c 1712 Pfam PF07675 Cleaved Adhesin Domain 1140 1309 1.6E-74 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS07975 97d920cf1ead9d7462313199bf23fd1c 1712 Pfam PF07675 Cleaved Adhesin Domain 507 678 6.1E-62 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS07975 97d920cf1ead9d7462313199bf23fd1c 1712 Pfam PF07675 Cleaved Adhesin Domain 959 1130 1.5E-61 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS07975 97d920cf1ead9d7462313199bf23fd1c 1712 Pfam PF07675 Cleaved Adhesin Domain 688 857 1.6E-74 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS07975 97d920cf1ead9d7462313199bf23fd1c 1712 Pfam PF07675 Cleaved Adhesin Domain 1409 1579 1.2E-60 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS07975 97d920cf1ead9d7462313199bf23fd1c 1712 SMART SM00060 474 599 23.0 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 PGJ_RS07975 97d920cf1ead9d7462313199bf23fd1c 1712 SMART SM00060 926 1051 27.0 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 PGJ_RS07975 97d920cf1ead9d7462313199bf23fd1c 1712 SMART SM00060 202 459 12.0 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 PGJ_RS07975 97d920cf1ead9d7462313199bf23fd1c 1712 SMART SM00060 1378 1630 140.0 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 PGJ_RS07975 97d920cf1ead9d7462313199bf23fd1c 1712 Pfam PF10365 Domain of unknown function (DUF2436) 56 190 7.4E-45 T 22-04-2016 IPR018832 Peptidase C25, gingipain, C-terminal PGJ_RS06745 c244773314b0f15f486174754289bfac 450 SMART SM00028 287 320 4.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS06745 c244773314b0f15f486174754289bfac 450 SMART SM00028 324 357 0.024 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS06745 c244773314b0f15f486174754289bfac 450 SMART SM00028 40 73 53.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS06745 c244773314b0f15f486174754289bfac 450 Pfam PF13432 Tetratricopeptide repeat 292 356 1.8E-6 T 22-04-2016 PGJ_RS06745 c244773314b0f15f486174754289bfac 450 Gene3D G3DSA:1.25.40.10 49 93 9.2E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS06745 c244773314b0f15f486174754289bfac 450 Gene3D G3DSA:1.25.40.10 289 405 9.2E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS06745 c244773314b0f15f486174754289bfac 450 SUPERFAMILY SSF48452 287 407 6.07E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS07865 6793734544a0656ca06ccb7bb14ae269 75 PANTHER PTHR24960:SF50 4 70 9.6E-19 T 22-04-2016 PGJ_RS07865 6793734544a0656ca06ccb7bb14ae269 75 Pfam PF12838 4Fe-4S dicluster domain 14 65 2.8E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PGJ_RS07865 6793734544a0656ca06ccb7bb14ae269 75 PANTHER PTHR24960 4 70 9.6E-19 T 22-04-2016 PGJ_RS07865 6793734544a0656ca06ccb7bb14ae269 75 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PGJ_RS07865 6793734544a0656ca06ccb7bb14ae269 75 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 15 26 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PGJ_RS07865 6793734544a0656ca06ccb7bb14ae269 75 Gene3D G3DSA:3.30.70.20 5 70 9.6E-16 T 22-04-2016 PGJ_RS07865 6793734544a0656ca06ccb7bb14ae269 75 SUPERFAMILY SSF54862 4 71 7.54E-17 T 22-04-2016 PGJ_RS05220 9c14a2c19a0d002d8ec846342a4b8316 150 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PGJ_RS05220 9c14a2c19a0d002d8ec846342a4b8316 150 PANTHER PTHR11079:SF72 10 150 2.0E-46 T 22-04-2016 PGJ_RS05220 9c14a2c19a0d002d8ec846342a4b8316 150 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 150 43.77 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 PGJ_RS05220 9c14a2c19a0d002d8ec846342a4b8316 150 SUPERFAMILY SSF53927 5 149 8.2E-51 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PGJ_RS05220 9c14a2c19a0d002d8ec846342a4b8316 150 Pfam PF14437 MafB19-like deaminase 10 150 5.0E-30 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 PGJ_RS05220 9c14a2c19a0d002d8ec846342a4b8316 150 Gene3D G3DSA:3.40.140.10 7 148 6.5E-56 T 22-04-2016 PGJ_RS05220 9c14a2c19a0d002d8ec846342a4b8316 150 PANTHER PTHR11079 10 150 2.0E-46 T 22-04-2016 PGJ_RS06070 0d0964b373c08e79360700e02c13de18 651 PANTHER PTHR33529:SF2 4 266 2.5E-70 T 22-04-2016 PGJ_RS06070 0d0964b373c08e79360700e02c13de18 651 PANTHER PTHR33529:SF2 364 499 2.5E-70 T 22-04-2016 PGJ_RS06070 0d0964b373c08e79360700e02c13de18 651 Pfam PF03739 Predicted permease YjgP/YjgQ family 13 470 1.8E-93 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 PGJ_RS06070 0d0964b373c08e79360700e02c13de18 651 PANTHER PTHR33529 4 266 2.5E-70 T 22-04-2016 PGJ_RS06070 0d0964b373c08e79360700e02c13de18 651 PANTHER PTHR33529 364 499 2.5E-70 T 22-04-2016 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SUPERFAMILY SSF48452 660 692 5.69E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SUPERFAMILY SSF48452 755 832 5.69E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SUPERFAMILY SSF48452 804 839 1.56E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SUPERFAMILY SSF48452 875 941 1.56E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Gene3D G3DSA:1.25.40.10 257 371 6.8E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Gene3D G3DSA:1.25.40.10 434 523 6.8E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SUPERFAMILY SSF48452 616 694 7.59E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SUPERFAMILY SSF48452 444 583 7.59E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SMART SM00028 176 208 440.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SMART SM00028 655 688 0.73 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SMART SM00028 318 351 17.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SMART SM00028 804 837 1.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SMART SM00028 949 982 270.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SMART SM00028 508 541 20.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SMART SM00028 546 579 4.1 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SMART SM00028 212 243 330.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SMART SM00028 247 280 490.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SMART SM00028 469 502 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SMART SM00028 618 651 66.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Gene3D G3DSA:1.25.40.10 601 840 3.0E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Gene3D G3DSA:1.25.40.10 901 986 3.9E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Gene3D G3DSA:1.25.40.10 140 256 1.0E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Pfam PF13432 Tetratricopeptide repeat 219 262 0.0016 T 22-04-2016 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Pfam PF13432 Tetratricopeptide repeat 771 834 0.0078 T 22-04-2016 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Pfam PF13432 Tetratricopeptide repeat 287 346 0.0095 T 22-04-2016 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Pfam PF13432 Tetratricopeptide repeat 512 578 1.1E-5 T 22-04-2016 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Pfam PF13432 Tetratricopeptide repeat 622 688 7.0E-9 T 22-04-2016 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Gene3D G3DSA:1.25.40.10 524 600 1.8E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Pfam PF13174 Tetratricopeptide repeat 955 982 0.0098 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Pfam PF13174 Tetratricopeptide repeat 582 614 0.0024 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 Pfam PF13174 Tetratricopeptide repeat 358 390 0.034 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SUPERFAMILY SSF48452 117 275 4.0E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 SUPERFAMILY SSF48452 246 369 1.39E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 PANTHER PTHR23083 445 687 2.1E-26 T 22-04-2016 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 PANTHER PTHR23083 283 367 2.1E-26 T 22-04-2016 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 PANTHER PTHR23083 18 32 2.1E-26 T 22-04-2016 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 PANTHER PTHR23083 803 841 2.1E-26 T 22-04-2016 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 PANTHER PTHR23083 880 977 2.1E-26 T 22-04-2016 PGJ_RS01505 b4204b50ad7ff8f8d5e9141b7a0d5850 995 PANTHER PTHR23083 172 240 2.1E-26 T 22-04-2016 PGJ_RS00115 d25a48fed2a6310b398db69e18ee8b58 162 PANTHER PTHR32125 4 161 7.7E-56 T 22-04-2016 PGJ_RS00115 d25a48fed2a6310b398db69e18ee8b58 162 Gene3D G3DSA:3.30.1330.50 4 159 3.1E-70 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS00115 d25a48fed2a6310b398db69e18ee8b58 162 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 36.22 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS00115 d25a48fed2a6310b398db69e18ee8b58 162 SUPERFAMILY SSF69765 5 159 1.57E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS00115 d25a48fed2a6310b398db69e18ee8b58 162 Pfam PF02542 YgbB family 5 158 6.1E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS00115 d25a48fed2a6310b398db69e18ee8b58 162 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS00115 d25a48fed2a6310b398db69e18ee8b58 162 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 2.9E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS04195 38b2b64b20dfb5f2609be92bec42629c 816 Pfam PF07715 TonB-dependent Receptor Plug Domain 129 199 1.8E-5 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS04195 38b2b64b20dfb5f2609be92bec42629c 816 Gene3D G3DSA:2.170.130.10 130 212 8.6E-8 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS04195 38b2b64b20dfb5f2609be92bec42629c 816 Pfam PF13715 CarboxypepD_reg-like domain 11 106 2.3E-13 T 22-04-2016 PGJ_RS04195 38b2b64b20dfb5f2609be92bec42629c 816 SUPERFAMILY SSF56935 103 778 2.64E-58 T 22-04-2016 PGJ_RS04195 38b2b64b20dfb5f2609be92bec42629c 816 SUPERFAMILY SSF49464 11 114 3.79E-12 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS04195 38b2b64b20dfb5f2609be92bec42629c 816 Pfam PF14905 Outer membrane protein beta-barrel family 363 776 2.3E-85 T 22-04-2016 PGJ_RS04195 38b2b64b20dfb5f2609be92bec42629c 816 Gene3D G3DSA:2.40.170.20 213 778 5.1E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS04195 38b2b64b20dfb5f2609be92bec42629c 816 Gene3D G3DSA:2.60.40.1120 11 115 1.1E-11 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS06110 01e1bc7779ad37615845056e7817d38d 273 PANTHER PTHR20881 10 273 2.3E-137 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PGJ_RS06110 01e1bc7779ad37615845056e7817d38d 273 Gene3D G3DSA:3.20.20.60 10 273 8.5E-113 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PGJ_RS06110 01e1bc7779ad37615845056e7817d38d 273 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 12 273 4.4E-97 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PGJ_RS06110 01e1bc7779ad37615845056e7817d38d 273 SUPERFAMILY SSF51621 11 273 6.73E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PGJ_RS06110 01e1bc7779ad37615845056e7817d38d 273 PIRSF PIRSF000388 3 273 1.0E-107 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PGJ_RS06110 01e1bc7779ad37615845056e7817d38d 273 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 268 4.0E-110 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PGJ_RS06110 01e1bc7779ad37615845056e7817d38d 273 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 12 273 41.296 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PGJ_RS02980 2107d0b274ce5ba57879d5231d4cb482 253 SUPERFAMILY SSF69593 26 246 3.27E-45 T 22-04-2016 PGJ_RS02980 2107d0b274ce5ba57879d5231d4cb482 253 SMART SM00563 78 192 8.1E-31 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PGJ_RS02980 2107d0b274ce5ba57879d5231d4cb482 253 Gene3D G3DSA:3.40.1130.10 61 235 2.0E-29 T 22-04-2016 PGJ_RS02980 2107d0b274ce5ba57879d5231d4cb482 253 Pfam PF01553 Acyltransferase 64 188 4.3E-26 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PGJ_RS02980 2107d0b274ce5ba57879d5231d4cb482 253 PANTHER PTHR10434 4 220 5.0E-53 T 22-04-2016 PGJ_RS02420 51af6bf449b9e6f6e962fbdc972b48d4 312 Pfam PF09084 NMT1/THI5 like 48 253 2.2E-13 T 22-04-2016 IPR015168 SsuA/THI5-like PGJ_RS02420 51af6bf449b9e6f6e962fbdc972b48d4 312 PANTHER PTHR30024 34 273 9.1E-21 T 22-04-2016 PGJ_RS02420 51af6bf449b9e6f6e962fbdc972b48d4 312 Gene3D G3DSA:3.40.190.10 115 211 1.6E-11 T 22-04-2016 PGJ_RS02420 51af6bf449b9e6f6e962fbdc972b48d4 312 SUPERFAMILY SSF53850 34 253 1.53E-25 T 22-04-2016 PGJ_RS05245 cf1f90bd8f963393cad2339ba2455526 200 PANTHER PTHR21098 1 199 2.6E-80 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS05245 cf1f90bd8f963393cad2339ba2455526 200 Gene3D G3DSA:2.40.30.20 5 102 1.1E-29 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PGJ_RS05245 cf1f90bd8f963393cad2339ba2455526 200 SUPERFAMILY SSF63380 91 198 1.36E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PGJ_RS05245 cf1f90bd8f963393cad2339ba2455526 200 SUPERFAMILY SSF63380 1 87 3.4E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PGJ_RS05245 cf1f90bd8f963393cad2339ba2455526 200 Pfam PF00677 Lumazine binding domain 98 187 3.6E-19 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS05245 cf1f90bd8f963393cad2339ba2455526 200 Pfam PF00677 Lumazine binding domain 3 84 3.1E-19 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS05245 cf1f90bd8f963393cad2339ba2455526 200 PIRSF PIRSF000498 1 200 3.5E-58 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS05245 cf1f90bd8f963393cad2339ba2455526 200 Gene3D G3DSA:2.40.30.20 103 198 1.7E-23 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PGJ_RS05245 cf1f90bd8f963393cad2339ba2455526 200 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 2.3E-53 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PGJ_RS04660 5e80d7c73cfe41e549a76b14af57deb8 263 Pfam PF01734 Patatin-like phospholipase 15 170 5.9E-28 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PGJ_RS04660 5e80d7c73cfe41e549a76b14af57deb8 263 PANTHER PTHR14226 9 256 2.5E-65 T 22-04-2016 PGJ_RS04660 5e80d7c73cfe41e549a76b14af57deb8 263 Gene3D G3DSA:3.40.1090.10 11 183 2.7E-19 T 22-04-2016 PGJ_RS04660 5e80d7c73cfe41e549a76b14af57deb8 263 SUPERFAMILY SSF52151 11 223 4.19E-55 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PGJ_RS04660 5e80d7c73cfe41e549a76b14af57deb8 263 PANTHER PTHR14226:SF37 9 256 2.5E-65 T 22-04-2016 PGJ_RS01210 42238b97ab34d5cb1f28067fe8bc8c5e 156 PIRSF PIRSF002070 1 155 4.7E-36 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PGJ_RS01210 42238b97ab34d5cb1f28067fe8bc8c5e 156 Gene3D G3DSA:2.40.50.140 1 156 1.7E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS01210 42238b97ab34d5cb1f28067fe8bc8c5e 156 SUPERFAMILY SSF50249 1 156 8.91E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS01210 42238b97ab34d5cb1f28067fe8bc8c5e 156 Pfam PF00436 Single-strand binding protein family 3 107 7.8E-32 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 PGJ_RS01210 42238b97ab34d5cb1f28067fe8bc8c5e 156 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 151 1.2E-39 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PGJ_RS01210 42238b97ab34d5cb1f28067fe8bc8c5e 156 Hamap MF_00984 Single-stranded DNA-binding protein. 3 112 30.712 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PGJ_RS01210 42238b97ab34d5cb1f28067fe8bc8c5e 156 PANTHER PTHR10302 1 118 4.2E-39 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PGJ_RS07170 3eca7a0eba46df029d2e2ed46f93eac7 196 Gene3D G3DSA:1.20.1440.20 17 196 2.7E-68 T 22-04-2016 IPR023353 LemA-like domain PGJ_RS07170 3eca7a0eba46df029d2e2ed46f93eac7 196 Pfam PF04011 LemA family 9 196 4.9E-76 T 22-04-2016 IPR007156 LemA PGJ_RS07170 3eca7a0eba46df029d2e2ed46f93eac7 196 SUPERFAMILY SSF140478 29 186 1.96E-58 T 22-04-2016 IPR023353 LemA-like domain PGJ_RS07170 3eca7a0eba46df029d2e2ed46f93eac7 196 PANTHER PTHR34478:SF2 2 196 2.2E-88 T 22-04-2016 PGJ_RS07170 3eca7a0eba46df029d2e2ed46f93eac7 196 PANTHER PTHR34478 2 196 2.2E-88 T 22-04-2016 PGJ_RS09445 615db850501000e41d1cc1c72047cfaf 370 Gene3D G3DSA:3.20.20.70 53 363 3.7E-47 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS09445 615db850501000e41d1cc1c72047cfaf 370 SMART SM00876 258 361 2.4E-33 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PGJ_RS09445 615db850501000e41d1cc1c72047cfaf 370 Pfam PF04055 Radical SAM superfamily 83 223 2.5E-10 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS09445 615db850501000e41d1cc1c72047cfaf 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 258 360 8.1E-24 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PGJ_RS09445 615db850501000e41d1cc1c72047cfaf 370 PANTHER PTHR22976 14 370 1.0E-153 T 22-04-2016 PGJ_RS09445 615db850501000e41d1cc1c72047cfaf 370 SUPERFAMILY SSF102114 39 363 3.92E-53 T 22-04-2016 PGJ_RS09445 615db850501000e41d1cc1c72047cfaf 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 368 7.7E-173 T 22-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 PGJ_RS09445 615db850501000e41d1cc1c72047cfaf 370 PANTHER PTHR22976:SF17 14 370 1.0E-153 T 22-04-2016 PGJ_RS09580 fb56c1afe7fa1dfc4ba8037dc9d4b87e 457 Pfam PF06321 Major fimbrial subunit protein (FimA) 27 284 5.5E-37 T 22-04-2016 IPR029141 Major fimbrial subunit protein, N-terminal PGJ_RS01290 b779bd0bb6ead4ba529ca3ca91abb8a3 210 PANTHER PTHR10509 3 208 4.3E-63 T 22-04-2016 PGJ_RS01290 b779bd0bb6ead4ba529ca3ca91abb8a3 210 Pfam PF01596 O-methyltransferase 13 208 4.3E-45 T 22-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 PGJ_RS01290 b779bd0bb6ead4ba529ca3ca91abb8a3 210 Gene3D G3DSA:3.40.50.150 3 209 3.0E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS01290 b779bd0bb6ead4ba529ca3ca91abb8a3 210 SUPERFAMILY SSF53335 3 210 1.41E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS01290 b779bd0bb6ead4ba529ca3ca91abb8a3 210 PANTHER PTHR10509:SF14 3 208 4.3E-63 T 22-04-2016 PGJ_RS03770 fd7f5a0f9354605df7a6445c3358375f 155 PANTHER PTHR30154:SF2 1 150 8.3E-54 T 22-04-2016 PGJ_RS03770 fd7f5a0f9354605df7a6445c3358375f 155 Pfam PF01037 Lrp/AsnC ligand binding domain 70 141 1.1E-17 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PGJ_RS03770 fd7f5a0f9354605df7a6445c3358375f 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 2.2E-16 T 22-04-2016 PGJ_RS03770 fd7f5a0f9354605df7a6445c3358375f 155 SMART SM00344 4 111 3.1E-37 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PGJ_RS03770 fd7f5a0f9354605df7a6445c3358375f 155 Gene3D G3DSA:3.30.70.920 57 138 8.2E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PGJ_RS03770 fd7f5a0f9354605df7a6445c3358375f 155 Gene3D G3DSA:1.10.10.10 2 53 1.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS03770 fd7f5a0f9354605df7a6445c3358375f 155 PANTHER PTHR30154 1 150 8.3E-54 T 22-04-2016 PGJ_RS03770 fd7f5a0f9354605df7a6445c3358375f 155 SUPERFAMILY SSF46785 3 64 4.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS03770 fd7f5a0f9354605df7a6445c3358375f 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.4E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PGJ_RS03770 fd7f5a0f9354605df7a6445c3358375f 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.4E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PGJ_RS03770 fd7f5a0f9354605df7a6445c3358375f 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.4E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PGJ_RS03770 fd7f5a0f9354605df7a6445c3358375f 155 SUPERFAMILY SSF54909 67 145 4.16E-17 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel PGJ_RS03645 97274a97836108f159d70a57cd4e000f 368 SUPERFAMILY SSF52266 195 305 4.4E-6 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain PGJ_RS03645 97274a97836108f159d70a57cd4e000f 368 Pfam PF08885 GSCFA family 63 300 8.6E-84 T 22-04-2016 IPR014982 GSCFA PGJ_RS09140 ac7887d08a70b7d11937072b131ee587 251 PANTHER PTHR39082 14 248 2.4E-23 T 22-04-2016 PGJ_RS09140 ac7887d08a70b7d11937072b131ee587 251 Pfam PF02591 C4-type zinc ribbon domain 212 244 4.7E-11 T 22-04-2016 IPR003743 C4-type zinc ribbon domain PGJ_RS02190 9ecfc32a4d92cda3ed9641bceb566e9f 222 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 222 26.227 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS02190 9ecfc32a4d92cda3ed9641bceb566e9f 222 PANTHER PTHR32125:SF4 6 220 1.2E-52 T 22-04-2016 PGJ_RS02190 9ecfc32a4d92cda3ed9641bceb566e9f 222 SUPERFAMILY SSF53448 5 220 1.02E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS02190 9ecfc32a4d92cda3ed9641bceb566e9f 222 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 221 1.2E-44 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PGJ_RS02190 9ecfc32a4d92cda3ed9641bceb566e9f 222 Gene3D G3DSA:3.90.550.10 2 221 3.4E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS02190 9ecfc32a4d92cda3ed9641bceb566e9f 222 PANTHER PTHR32125 6 220 1.2E-52 T 22-04-2016 PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 SUPERFAMILY SSF55920 306 561 3.53E-48 T 22-04-2016 IPR000994 Peptidase M24, structural domain PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 Gene3D G3DSA:3.90.230.10 303 562 7.3E-54 T 22-04-2016 IPR000994 Peptidase M24, structural domain PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 PANTHER PTHR10804:SF87 1 183 2.9E-185 T 22-04-2016 PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 PANTHER PTHR10804:SF87 284 593 2.9E-185 T 22-04-2016 PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 130 5.4E-17 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 PANTHER PTHR10804 1 183 2.9E-185 T 22-04-2016 PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 PANTHER PTHR10804 284 593 2.9E-185 T 22-04-2016 PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 SUPERFAMILY SSF53092 12 120 1.92E-11 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 Pfam PF16188 C-terminal region of peptidase_M24 535 593 5.3E-18 T 22-04-2016 IPR032416 Peptidase M24, C-terminal domain PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 Pfam PF16189 Creatinase/Prolidase N-terminal domain 151 309 6.4E-42 T 22-04-2016 PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 Gene3D G3DSA:3.40.350.10 5 131 4.3E-21 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 Gene3D G3DSA:3.40.350.10 171 288 6.5E-6 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PGJ_RS03155 791889c277dc37963cedb64213b867e0 595 Pfam PF00557 Metallopeptidase family M24 313 524 3.8E-39 T 22-04-2016 IPR000994 Peptidase M24, structural domain PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 SMART SM00382 352 526 1.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 SMART SM00382 26 237 1.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 PANTHER PTHR19211:SF60 1 531 1.8E-302 T 22-04-2016 PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 PANTHER PTHR19211:SF60 549 586 1.8E-302 T 22-04-2016 PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 Gene3D G3DSA:3.40.50.300 1 88 3.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 Gene3D G3DSA:3.40.50.300 125 279 3.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 Gene3D G3DSA:3.40.50.300 328 553 4.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 SUPERFAMILY SSF52540 303 523 4.55E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 Pfam PF12848 ABC transporter 231 315 2.3E-28 T 22-04-2016 IPR032781 ABC-transporter extension domain PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 ProSitePatterns PS00211 ABC transporters family signature. 446 460 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 PANTHER PTHR19211 1 531 1.8E-302 T 22-04-2016 PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 PANTHER PTHR19211 549 586 1.8E-302 T 22-04-2016 PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 SUPERFAMILY SSF52540 133 268 1.68E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 SUPERFAMILY SSF52540 2 92 1.68E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 Pfam PF00005 ABC transporter 346 474 1.0E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS09880 40a6e7819ad2292257debae20a6f85b9 645 Pfam PF00005 ABC transporter 18 192 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS02695 ebd8e6ffb694d9bb72cc4540852dbd72 368 Gene3D G3DSA:3.60.150.10 7 358 1.6E-154 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS02695 ebd8e6ffb694d9bb72cc4540852dbd72 368 ProSitePatterns PS00789 Chorismate synthase signature 3. 326 342 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS02695 ebd8e6ffb694d9bb72cc4540852dbd72 368 ProSitePatterns PS00787 Chorismate synthase signature 1. 14 29 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS02695 ebd8e6ffb694d9bb72cc4540852dbd72 368 TIGRFAM TIGR00033 aroC: chorismate synthase 8 356 6.0E-159 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS02695 ebd8e6ffb694d9bb72cc4540852dbd72 368 PIRSF PIRSF001456 1 368 2.0E-152 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS02695 ebd8e6ffb694d9bb72cc4540852dbd72 368 Pfam PF01264 Chorismate synthase 8 352 6.4E-140 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS02695 ebd8e6ffb694d9bb72cc4540852dbd72 368 PANTHER PTHR21085 1 357 7.5E-192 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS02695 ebd8e6ffb694d9bb72cc4540852dbd72 368 Hamap MF_00300 Chorismate synthase [aroC]. 8 359 37.94 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS02695 ebd8e6ffb694d9bb72cc4540852dbd72 368 SUPERFAMILY SSF103263 1 356 1.02E-139 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS02695 ebd8e6ffb694d9bb72cc4540852dbd72 368 ProSitePatterns PS00788 Chorismate synthase signature 2. 122 138 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 718 764 8.5E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 602 7.2E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 769 812 2.9E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 616 660 4.8E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 503 547 1.5E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 666 711 1.8E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 Gene3D G3DSA:2.120.10.90 496 815 6.1E-115 T 22-04-2016 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 PANTHER PTHR10169 2 784 0.0 T 22-04-2016 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 Gene3D G3DSA:3.30.1360.40 237 332 2.9E-36 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 SUPERFAMILY SSF56719 30 487 1.09E-173 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 470 1.1E-157 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 SUPERFAMILY SSF101904 500 828 4.97E-96 T 22-04-2016 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 Gene3D G3DSA:3.90.199.10 30 236 6.5E-117 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 Gene3D G3DSA:3.90.199.10 333 398 6.5E-117 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 SMART SM00434 11 464 1.9E-263 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 820 28.491 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 PANTHER PTHR10169:SF48 2 784 0.0 T 22-04-2016 PGJ_RS02385 e292552b23a84547a4aeeda6ae537d27 859 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 815 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PGJ_RS09720 cefab560051251d949d8ca55c37d7ef2 185 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 76 175 1.8E-13 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PGJ_RS09720 cefab560051251d949d8ca55c37d7ef2 185 PANTHER PTHR10516 64 183 9.6E-12 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PGJ_RS09720 cefab560051251d949d8ca55c37d7ef2 185 SUPERFAMILY SSF54534 6 178 1.12E-23 T 22-04-2016 PGJ_RS09720 cefab560051251d949d8ca55c37d7ef2 185 Gene3D G3DSA:3.10.50.40 32 183 1.6E-25 T 22-04-2016 PGJ_RS09720 cefab560051251d949d8ca55c37d7ef2 185 PANTHER PTHR10516:SF145 64 183 9.6E-12 T 22-04-2016 PGJ_RS02880 2cfe5778b45137e9d8d4465c9c8d8b59 309 PANTHER PTHR12737 7 309 1.6E-95 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PGJ_RS02880 2cfe5778b45137e9d8d4465c9c8d8b59 309 Pfam PF02274 Amidinotransferase 14 306 8.7E-80 T 22-04-2016 PGJ_RS02880 2cfe5778b45137e9d8d4465c9c8d8b59 309 PANTHER PTHR12737:SF21 7 309 1.6E-95 T 22-04-2016 PGJ_RS02880 2cfe5778b45137e9d8d4465c9c8d8b59 309 Gene3D G3DSA:3.75.10.10 10 303 1.6E-33 T 22-04-2016 PGJ_RS02880 2cfe5778b45137e9d8d4465c9c8d8b59 309 PIRSF PIRSF028188 1 309 4.8E-116 T 22-04-2016 IPR014541 Predicted amidinotransferase, FN0238 type PGJ_RS02880 2cfe5778b45137e9d8d4465c9c8d8b59 309 SUPERFAMILY SSF55909 9 304 1.93E-44 T 22-04-2016 PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 Gene3D G3DSA:1.20.200.10 119 388 9.1E-82 T 22-04-2016 PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 PANTHER PTHR11444:SF17 6 447 7.9E-192 T 22-04-2016 PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 Gene3D G3DSA:1.10.275.10 5 118 8.9E-43 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 Pfam PF08328 Adenylosuccinate lyase C-terminal 330 445 1.2E-45 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 13 446 3.8E-118 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 Gene3D G3DSA:1.10.40.30 389 445 1.0E-24 T 22-04-2016 PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 Pfam PF00206 Lyase 15 311 2.2E-52 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 PANTHER PTHR11444 6 447 7.9E-192 T 22-04-2016 IPR000362 Fumarate lyase family PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 SUPERFAMILY SSF48557 7 446 2.83E-97 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 PRINTS PR00149 Fumarate lyase superfamily signature 250 277 2.2E-15 T 22-04-2016 IPR000362 Fumarate lyase family PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 PRINTS PR00149 Fumarate lyase superfamily signature 293 309 2.2E-15 T 22-04-2016 IPR000362 Fumarate lyase family PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 PRINTS PR00149 Fumarate lyase superfamily signature 162 180 2.2E-15 T 22-04-2016 IPR000362 Fumarate lyase family PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 PRINTS PR00149 Fumarate lyase superfamily signature 116 134 2.2E-15 T 22-04-2016 IPR000362 Fumarate lyase family PGJ_RS03750 2650524b893e82f17ccfee0e8d9adecf 447 ProSitePatterns PS00163 Fumarate lyases signature. 293 302 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PGJ_RS09805 5dd534472ff2ef42a243f96eb6a83253 244 SMART SM00900 136 234 9.2E-23 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PGJ_RS09805 5dd534472ff2ef42a243f96eb6a83253 244 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 4 244 26.523 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 PGJ_RS09805 5dd534472ff2ef42a243f96eb6a83253 244 Pfam PF04205 FMN-binding domain 136 227 1.7E-13 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PGJ_RS09805 5dd534472ff2ef42a243f96eb6a83253 244 PANTHER PTHR37838:SF1 1 237 1.6E-50 T 22-04-2016 PGJ_RS09805 5dd534472ff2ef42a243f96eb6a83253 244 PANTHER PTHR37838 1 237 1.6E-50 T 22-04-2016 PGJ_RS09805 5dd534472ff2ef42a243f96eb6a83253 244 PIRSF PIRSF009437 1 244 2.2E-53 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 PGJ_RS09805 5dd534472ff2ef42a243f96eb6a83253 244 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 4 240 6.1E-83 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 PGJ_RS00610 334839450daea10f4cad925b1a3df9ff 501 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 369 483 2.4E-9 T 22-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PGJ_RS01520 2038578e40c6a091fe11a406003c3ddc 223 Pfam PF01427 D-ala-D-ala dipeptidase 32 215 4.5E-25 T 22-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 PGJ_RS01520 2038578e40c6a091fe11a406003c3ddc 223 PIRSF PIRSF026671 7 223 3.3E-58 T 22-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 PGJ_RS01520 2038578e40c6a091fe11a406003c3ddc 223 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 32 220 24.914 T 22-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 PGJ_RS01520 2038578e40c6a091fe11a406003c3ddc 223 Gene3D G3DSA:3.30.1380.10 32 213 1.9E-52 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain PGJ_RS01520 2038578e40c6a091fe11a406003c3ddc 223 SUPERFAMILY SSF55166 32 211 1.12E-47 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain PGJ_RS01520 2038578e40c6a091fe11a406003c3ddc 223 PANTHER PTHR22935 1 212 1.1E-22 T 22-04-2016 PGJ_RS01520 2038578e40c6a091fe11a406003c3ddc 223 PANTHER PTHR22935:SF81 1 212 1.1E-22 T 22-04-2016 PGJ_RS05115 9fe26673100b4b0b2ac060252a50261d 712 Gene3D G3DSA:1.25.40.10 470 711 5.5E-27 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS05115 9fe26673100b4b0b2ac060252a50261d 712 SMART SM00028 539 572 0.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS05115 9fe26673100b4b0b2ac060252a50261d 712 SMART SM00028 573 605 370.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS05115 9fe26673100b4b0b2ac060252a50261d 712 SMART SM00028 505 538 1.4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS05115 9fe26673100b4b0b2ac060252a50261d 712 SMART SM00028 642 675 130.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS05115 9fe26673100b4b0b2ac060252a50261d 712 SMART SM00028 607 640 190.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS05115 9fe26673100b4b0b2ac060252a50261d 712 SUPERFAMILY SSF48452 507 675 1.64E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS05115 9fe26673100b4b0b2ac060252a50261d 712 Pfam PF13432 Tetratricopeptide repeat 549 594 0.0013 T 22-04-2016 PGJ_RS05115 9fe26673100b4b0b2ac060252a50261d 712 PANTHER PTHR23083 504 674 3.5E-16 T 22-04-2016 PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 PANTHER PTHR11689 3 595 6.9E-109 T 22-04-2016 PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 PRINTS PR00762 Chloride channel signature 403 422 1.9E-15 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 PRINTS PR00762 Chloride channel signature 349 369 1.9E-15 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 PRINTS PR00762 Chloride channel signature 385 401 1.9E-15 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 PRINTS PR00762 Chloride channel signature 118 137 1.9E-15 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 PRINTS PR00762 Chloride channel signature 169 188 1.9E-15 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 PANTHER PTHR11689:SF14 3 595 6.9E-109 T 22-04-2016 PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 Pfam PF00654 Voltage gated chloride channel 76 435 2.9E-75 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 Gene3D G3DSA:1.10.3080.10 19 460 8.9E-75 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 Pfam PF00571 CBS domain 471 520 0.0021 T 22-04-2016 IPR000644 CBS domain PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 Pfam PF00571 CBS domain 533 584 1.7E-4 T 22-04-2016 IPR000644 CBS domain PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 SUPERFAMILY SSF81340 10 453 6.02E-91 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 Gene3D G3DSA:3.10.580.10 463 589 1.4E-17 T 22-04-2016 PGJ_RS08550 79c933131785cbf7b0a018dac25d1ef1 598 SUPERFAMILY SSF54631 465 587 1.77E-21 T 22-04-2016 PGJ_RS04730 514487819af19a45cfb612ad245424a3 151 PANTHER PTHR10681:SF113 2 149 5.5E-39 T 22-04-2016 PGJ_RS04730 514487819af19a45cfb612ad245424a3 151 PIRSF PIRSF000239 1 149 2.6E-18 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PGJ_RS04730 514487819af19a45cfb612ad245424a3 151 SUPERFAMILY SSF52833 1 150 4.88E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS04730 514487819af19a45cfb612ad245424a3 151 PANTHER PTHR10681 2 149 5.5E-39 T 22-04-2016 PGJ_RS04730 514487819af19a45cfb612ad245424a3 151 Pfam PF00578 AhpC/TSA family 4 131 3.2E-32 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PGJ_RS04730 514487819af19a45cfb612ad245424a3 151 Gene3D G3DSA:3.40.30.10 1 149 7.6E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS00715 efc28052ec77ba750752e5db5dc753a8 330 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 319 2.8E-85 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 PGJ_RS00715 efc28052ec77ba750752e5db5dc753a8 330 PANTHER PTHR11079:SF10 7 225 1.1E-52 T 22-04-2016 PGJ_RS00715 efc28052ec77ba750752e5db5dc753a8 330 Gene3D G3DSA:3.40.140.10 6 131 1.3E-31 T 22-04-2016 PGJ_RS00715 efc28052ec77ba750752e5db5dc753a8 330 Pfam PF01872 RibD C-terminal domain 150 311 4.9E-30 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PGJ_RS00715 efc28052ec77ba750752e5db5dc753a8 330 Gene3D G3DSA:3.40.430.10 132 322 6.1E-54 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain PGJ_RS00715 efc28052ec77ba750752e5db5dc753a8 330 PIRSF PIRSF006769 1 327 9.4E-100 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 PGJ_RS00715 efc28052ec77ba750752e5db5dc753a8 330 SUPERFAMILY SSF53597 148 324 9.06E-41 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain PGJ_RS00715 efc28052ec77ba750752e5db5dc753a8 330 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 91 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PGJ_RS00715 efc28052ec77ba750752e5db5dc753a8 330 SUPERFAMILY SSF53927 4 148 5.08E-44 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PGJ_RS00715 efc28052ec77ba750752e5db5dc753a8 330 PANTHER PTHR11079 7 225 1.1E-52 T 22-04-2016 PGJ_RS00715 efc28052ec77ba750752e5db5dc753a8 330 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 102 6.1E-18 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 Pfam PF00890 FAD binding domain 36 449 1.8E-57 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 PANTHER PTHR11632:SF53 1 646 0.0 T 22-04-2016 PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 Pfam PF02910 Fumarate reductase flavoprotein C-term 511 645 1.2E-34 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 Gene3D G3DSA:1.20.58.100 483 600 6.9E-33 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 37 56 9.8E-7 T 22-04-2016 PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 413 435 9.8E-7 T 22-04-2016 PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 SUPERFAMILY SSF46977 502 645 3.53E-39 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 SUPERFAMILY SSF56425 262 411 1.74E-30 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 Gene3D G3DSA:3.90.700.10 268 404 2.0E-16 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 SUPERFAMILY SSF51905 414 483 1.19E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 SUPERFAMILY SSF51905 32 278 1.19E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 Gene3D G3DSA:3.50.50.60 406 458 2.2E-76 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 Gene3D G3DSA:3.50.50.60 22 267 2.2E-76 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 37 645 2.7E-291 T 22-04-2016 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|UniPathway: UPA00223 PGJ_RS01780 85679f8ae781474eeee5b08600e0f82a 647 PANTHER PTHR11632 1 646 0.0 T 22-04-2016 PGJ_RS00875 18a0cee625ccaee686313c4ad983b0e3 254 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 14 241 1.8E-84 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PGJ_RS00875 18a0cee625ccaee686313c4ad983b0e3 254 PANTHER PTHR10291 14 254 1.2E-115 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PGJ_RS00875 18a0cee625ccaee686313c4ad983b0e3 254 SUPERFAMILY SSF64005 14 237 6.93E-83 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PGJ_RS00875 18a0cee625ccaee686313c4ad983b0e3 254 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 14 242 39.469 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PGJ_RS00875 18a0cee625ccaee686313c4ad983b0e3 254 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 187 204 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 PGJ_RS00875 18a0cee625ccaee686313c4ad983b0e3 254 Pfam PF01255 Putative undecaprenyl diphosphate synthase 21 241 2.2E-76 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PGJ_RS00875 18a0cee625ccaee686313c4ad983b0e3 254 Gene3D G3DSA:3.40.1180.10 14 247 5.7E-95 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PGJ_RS05180 619747ee138b409b1bdd011865f171e7 248 SUPERFAMILY SSF53448 6 231 1.13E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS05180 619747ee138b409b1bdd011865f171e7 248 Gene3D G3DSA:3.90.550.10 6 230 1.1E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS05180 619747ee138b409b1bdd011865f171e7 248 Pfam PF00535 Glycosyl transferase family 2 9 158 1.3E-22 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PGJ_RS05180 619747ee138b409b1bdd011865f171e7 248 PANTHER PTHR22916 2 242 2.4E-60 T 22-04-2016 PGJ_RS05180 619747ee138b409b1bdd011865f171e7 248 PANTHER PTHR22916:SF4 2 242 2.4E-60 T 22-04-2016 PGJ_RS02400 f292b46763e4cc5a7b2ab5c90bef0031 217 PANTHER PTHR30086 6 216 8.8E-36 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PGJ_RS02400 f292b46763e4cc5a7b2ab5c90bef0031 217 Pfam PF01810 LysE type translocator 21 203 2.7E-19 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PGJ_RS02400 f292b46763e4cc5a7b2ab5c90bef0031 217 PANTHER PTHR30086:SF6 6 216 8.8E-36 T 22-04-2016 PGJ_RS09860 4434969e92ed4474aa8715aa4ab286e3 385 PANTHER PTHR33258 2 339 5.3E-66 T 22-04-2016 PGJ_RS09860 4434969e92ed4474aa8715aa4ab286e3 385 Gene3D G3DSA:3.90.350.10 188 311 8.5E-7 T 22-04-2016 IPR014736 Transposase, Tn5-like, core PGJ_RS09860 4434969e92ed4474aa8715aa4ab286e3 385 PANTHER PTHR33258:SF1 2 339 5.3E-66 T 22-04-2016 PGJ_RS09860 4434969e92ed4474aa8715aa4ab286e3 385 SUPERFAMILY SSF53098 114 352 1.59E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS09860 4434969e92ed4474aa8715aa4ab286e3 385 Pfam PF14294 Domain of unknown function (DUF4372) 4 75 1.2E-23 T 22-04-2016 IPR025399 Domain of unknown function DUF4372 PGJ_RS09860 4434969e92ed4474aa8715aa4ab286e3 385 Pfam PF01609 Transposase DDE domain 121 334 2.0E-29 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS02925 4434969e92ed4474aa8715aa4ab286e3 385 PANTHER PTHR33258 2 339 5.3E-66 T 22-04-2016 PGJ_RS02925 4434969e92ed4474aa8715aa4ab286e3 385 Gene3D G3DSA:3.90.350.10 188 311 8.5E-7 T 22-04-2016 IPR014736 Transposase, Tn5-like, core PGJ_RS02925 4434969e92ed4474aa8715aa4ab286e3 385 PANTHER PTHR33258:SF1 2 339 5.3E-66 T 22-04-2016 PGJ_RS02925 4434969e92ed4474aa8715aa4ab286e3 385 SUPERFAMILY SSF53098 114 352 1.59E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS02925 4434969e92ed4474aa8715aa4ab286e3 385 Pfam PF14294 Domain of unknown function (DUF4372) 4 75 1.2E-23 T 22-04-2016 IPR025399 Domain of unknown function DUF4372 PGJ_RS02925 4434969e92ed4474aa8715aa4ab286e3 385 Pfam PF01609 Transposase DDE domain 121 334 2.0E-29 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 Gene3D G3DSA:1.10.730.10 727 913 4.2E-47 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 SUPERFAMILY SSF47323 743 983 2.06E-56 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PANTHER PTHR11946:SF87 586 1025 0.0 T 22-04-2016 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PANTHER PTHR11946:SF87 416 422 0.0 T 22-04-2016 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PANTHER PTHR11946:SF87 439 549 0.0 T 22-04-2016 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PANTHER PTHR11946:SF87 2 253 0.0 T 22-04-2016 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PANTHER PTHR11946:SF87 293 399 0.0 T 22-04-2016 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PANTHER PTHR11946 586 1025 0.0 T 22-04-2016 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PANTHER PTHR11946 416 422 0.0 T 22-04-2016 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PANTHER PTHR11946 439 549 0.0 T 22-04-2016 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PANTHER PTHR11946 2 253 0.0 T 22-04-2016 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PANTHER PTHR11946 293 399 0.0 T 22-04-2016 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 SUPERFAMILY SSF52374 459 737 2.43E-121 T 22-04-2016 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 SUPERFAMILY SSF52374 11 200 2.43E-121 T 22-04-2016 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 726 1.4E-152 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 3 1134 13.373 T 22-04-2016 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 Gene3D G3DSA:3.40.50.620 462 726 7.0E-138 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 Gene3D G3DSA:3.40.50.620 10 196 7.0E-138 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 Pfam PF08264 Anticodon-binding domain of tRNA 775 920 4.5E-29 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 SUPERFAMILY SSF50677 300 392 7.53E-32 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 SUPERFAMILY SSF50677 204 261 7.53E-32 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 8 937 0.0 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 Gene3D G3DSA:3.90.740.10 206 408 3.5E-44 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 43 54 6.2E-17 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 647 656 6.2E-17 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 605 618 6.2E-17 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PGJ_RS01870 c07d44d101c88e90495eb032bacb8b7f 1137 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 457 472 6.2E-17 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 Pfam PF01131 DNA topoisomerase 151 571 3.5E-119 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 SMART SM00493 1 124 2.3E-12 T 22-04-2016 IPR006171 Toprim domain PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 SUPERFAMILY SSF56712 1 585 5.76E-174 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 Pfam PF01751 Toprim domain 3 132 5.8E-12 T 22-04-2016 IPR006171 Toprim domain PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 649 9.6E-173 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 PANTHER PTHR11390 1 482 8.3E-164 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 PANTHER PTHR11390 499 574 8.3E-164 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 SMART SM00436 124 217 6.4E-38 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 Gene3D G3DSA:3.40.50.140 1 150 8.5E-43 T 22-04-2016 IPR006171 Toprim domain PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 378 394 8.0E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 300 309 8.0E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 8.0E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 499 513 8.0E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 8.0E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 Gene3D G3DSA:1.10.460.10 453 582 2.3E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 Gene3D G3DSA:1.10.460.10 154 211 2.3E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 Gene3D G3DSA:1.10.290.10 269 392 1.5E-35 T 22-04-2016 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PGJ_RS00480 47ad60b212018e68bd6e7c701e1fe904 675 SMART SM00437 258 536 5.9E-77 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PGJ_RS05155 8f5963e008a329b5b199f0eba2ac8f4e 252 PANTHER PTHR11142:SF0 1 249 7.1E-72 T 22-04-2016 PGJ_RS05155 8f5963e008a329b5b199f0eba2ac8f4e 252 Gene3D G3DSA:3.30.70.580 1 107 9.5E-34 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05155 8f5963e008a329b5b199f0eba2ac8f4e 252 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 241 6.4E-50 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05155 8f5963e008a329b5b199f0eba2ac8f4e 252 Gene3D G3DSA:3.30.70.660 109 244 1.6E-36 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05155 8f5963e008a329b5b199f0eba2ac8f4e 252 PANTHER PTHR11142 1 249 7.1E-72 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05155 8f5963e008a329b5b199f0eba2ac8f4e 252 Pfam PF01416 tRNA pseudouridine synthase 152 247 1.5E-22 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05155 8f5963e008a329b5b199f0eba2ac8f4e 252 Pfam PF01416 tRNA pseudouridine synthase 9 106 9.3E-6 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05155 8f5963e008a329b5b199f0eba2ac8f4e 252 SUPERFAMILY SSF55120 1 250 4.89E-71 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05155 8f5963e008a329b5b199f0eba2ac8f4e 252 PIRSF PIRSF001430 1 252 6.2E-77 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05155 8f5963e008a329b5b199f0eba2ac8f4e 252 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 246 30.699 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS07095 c99009513a79ee35b3609628268b1c04 506 PANTHER PTHR32507 1 479 1.3E-170 T 22-04-2016 PGJ_RS07095 c99009513a79ee35b3609628268b1c04 506 Pfam PF00999 Sodium/hydrogen exchanger family 9 395 1.6E-49 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PGJ_RS07095 c99009513a79ee35b3609628268b1c04 506 SUPERFAMILY SSF116726 416 479 1.18E-5 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS07095 c99009513a79ee35b3609628268b1c04 506 PANTHER PTHR32507:SF7 1 479 1.3E-170 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 PGJ_RS09820 9849d0fed6fb8ccebaa32a783df58609 438 PANTHER PTHR33446 241 438 1.2E-37 T 22-04-2016 PGJ_RS09820 9849d0fed6fb8ccebaa32a783df58609 438 PANTHER PTHR33446 6 182 1.2E-37 T 22-04-2016 PGJ_RS09820 9849d0fed6fb8ccebaa32a783df58609 438 Pfam PF05569 BlaR1 peptidase M56 158 267 3.2E-14 T 22-04-2016 IPR008756 Peptidase M56 PGJ_RS09820 9849d0fed6fb8ccebaa32a783df58609 438 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 360 437 1.3E-18 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 PGJ_RS09820 9849d0fed6fb8ccebaa32a783df58609 438 SUPERFAMILY SSF74653 353 435 2.09E-19 T 22-04-2016 PGJ_RS09820 9849d0fed6fb8ccebaa32a783df58609 438 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 362 438 4.0E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 PGJ_RS09820 9849d0fed6fb8ccebaa32a783df58609 438 PANTHER PTHR33446:SF2 241 438 1.2E-37 T 22-04-2016 PGJ_RS09820 9849d0fed6fb8ccebaa32a783df58609 438 PANTHER PTHR33446:SF2 6 182 1.2E-37 T 22-04-2016 PGJ_RS09820 9849d0fed6fb8ccebaa32a783df58609 438 Gene3D G3DSA:3.30.1150.10 354 438 4.5E-9 T 22-04-2016 PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 Gene3D G3DSA:1.10.8.60 190 260 3.5E-30 T 22-04-2016 PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 PANTHER PTHR13779:SF25 8 334 1.4E-166 T 22-04-2016 PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 Gene3D G3DSA:3.40.50.300 24 184 2.9E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 256 331 6.0E-37 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 SMART SM00382 56 187 1.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 SUPERFAMILY SSF52540 24 256 4.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 PANTHER PTHR13779 8 334 1.4E-166 T 22-04-2016 PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 343 159.315 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 Gene3D G3DSA:1.10.10.10 262 332 1.2E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 29 331 2.3E-135 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.0E-32 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 SUPERFAMILY SSF46785 262 333 9.07E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06595 702224f7e45e56ab0dea6e9d554ed376 343 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 1.1E-110 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PGJ_RS05460 37032a97b0b7c4519a4d08271430432f 788 Pfam PF02687 FtsX-like permease family 279 395 1.5E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS05460 37032a97b0b7c4519a4d08271430432f 788 Pfam PF02687 FtsX-like permease family 669 777 2.2E-13 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS05460 37032a97b0b7c4519a4d08271430432f 788 PANTHER PTHR30572:SF4 276 343 1.0E-39 T 22-04-2016 PGJ_RS05460 37032a97b0b7c4519a4d08271430432f 788 PANTHER PTHR30572:SF4 391 788 1.0E-39 T 22-04-2016 PGJ_RS05460 37032a97b0b7c4519a4d08271430432f 788 PANTHER PTHR30572 276 343 1.0E-39 T 22-04-2016 PGJ_RS05460 37032a97b0b7c4519a4d08271430432f 788 PANTHER PTHR30572 391 788 1.0E-39 T 22-04-2016 PGJ_RS05460 37032a97b0b7c4519a4d08271430432f 788 Pfam PF12704 MacB-like periplasmic core domain 15 216 1.3E-13 T 22-04-2016 IPR025857 MacB-like periplasmic core domain PGJ_RS03840 9cb2360778d866568369bb320ff3a286 383 PANTHER PTHR12526 22 378 9.7E-49 T 22-04-2016 PGJ_RS03840 9cb2360778d866568369bb320ff3a286 383 Gene3D G3DSA:3.40.50.2000 165 360 3.1E-21 T 22-04-2016 PGJ_RS03840 9cb2360778d866568369bb320ff3a286 383 SUPERFAMILY SSF53756 4 378 3.27E-62 T 22-04-2016 PGJ_RS03840 9cb2360778d866568369bb320ff3a286 383 Pfam PF13439 Glycosyltransferase Family 4 15 182 2.6E-18 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PGJ_RS03840 9cb2360778d866568369bb320ff3a286 383 Pfam PF00534 Glycosyl transferases group 1 195 344 4.3E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 PGJ_RS07890 22a68a02d496f1cf9a26abcc5a5c5352 238 Pfam PF05140 ResB-like family 143 187 1.6E-8 T 22-04-2016 IPR007816 ResB-like domain PGJ_RS05850 5d2bad0fe9ce8e9a48d0d7267be57e01 127 Pfam PF11680 Protein of unknown function (DUF3276) 9 98 3.5E-20 T 22-04-2016 IPR021694 Protein of unknown function DUF3276 PGJ_RS09075 9768be99447d923cc507bb925039493d 837 SUPERFAMILY SSF52540 309 470 6.82E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09075 9768be99447d923cc507bb925039493d 837 SUPERFAMILY SSF52540 600 673 8.86E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09075 9768be99447d923cc507bb925039493d 837 TIGRFAM TIGR00595 priA: primosomal protein N' 328 837 1.1E-114 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PGJ_RS09075 9768be99447d923cc507bb925039493d 837 PANTHER PTHR30580 1 837 1.4E-142 T 22-04-2016 PGJ_RS09075 9768be99447d923cc507bb925039493d 837 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 837 19.864 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PGJ_RS09075 9768be99447d923cc507bb925039493d 837 Gene3D G3DSA:3.40.50.300 331 475 2.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09075 9768be99447d923cc507bb925039493d 837 Gene3D G3DSA:3.40.50.300 603 738 1.6E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07295 495b21172acf59b4fe8634569eb695fc 300 PANTHER PTHR12234 1 299 1.2E-134 T 22-04-2016 PGJ_RS07295 495b21172acf59b4fe8634569eb695fc 300 PANTHER PTHR12234:SF0 1 299 1.2E-134 T 22-04-2016 PGJ_RS07295 495b21172acf59b4fe8634569eb695fc 300 SUPERFAMILY SSF55116 5 182 5.23E-72 T 22-04-2016 IPR022384 Formiminotransferase subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|UniPathway: UPA00193|UniPathway: UPA00379 PGJ_RS07295 495b21172acf59b4fe8634569eb695fc 300 Gene3D G3DSA:3.30.70.670 184 299 3.9E-49 T 22-04-2016 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|UniPathway: UPA00193|UniPathway: UPA00379 PGJ_RS07295 495b21172acf59b4fe8634569eb695fc 300 SUPERFAMILY SSF55116 183 299 1.1E-46 T 22-04-2016 IPR022384 Formiminotransferase subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|UniPathway: UPA00193|UniPathway: UPA00379 PGJ_RS07295 495b21172acf59b4fe8634569eb695fc 300 Gene3D G3DSA:3.30.990.10 5 182 1.8E-75 T 22-04-2016 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|UniPathway: UPA00193|UniPathway: UPA00379 PGJ_RS07295 495b21172acf59b4fe8634569eb695fc 300 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 6 181 1.1E-73 T 22-04-2016 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|UniPathway: UPA00193|UniPathway: UPA00379 PGJ_RS07295 495b21172acf59b4fe8634569eb695fc 300 SMART SM01222 5 182 1.0E-112 T 22-04-2016 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|UniPathway: UPA00193|UniPathway: UPA00379 PGJ_RS07295 495b21172acf59b4fe8634569eb695fc 300 TIGRFAM TIGR02024 FtcD: glutamate formiminotransferase 4 299 7.6E-131 T 22-04-2016 IPR004227 Formiminotransferase catalytic domain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|UniPathway: UPA00193|UniPathway: UPA00379 PGJ_RS07295 495b21172acf59b4fe8634569eb695fc 300 Pfam PF02971 Formiminotransferase domain 184 289 3.6E-25 T 22-04-2016 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|UniPathway: UPA00193|UniPathway: UPA00379 PGJ_RS07295 495b21172acf59b4fe8634569eb695fc 300 SMART SM01221 183 297 3.1E-75 T 22-04-2016 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|UniPathway: UPA00193|UniPathway: UPA00379 PGJ_RS04425 073a601f73c312679d2ed6fcc3a6917e 168 PIRSF PIRSF001338 1 162 2.1E-63 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 PGJ_RS04425 073a601f73c312679d2ed6fcc3a6917e 168 SUPERFAMILY SSF52255 3 164 1.05E-59 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PGJ_RS04425 073a601f73c312679d2ed6fcc3a6917e 168 PANTHER PTHR23046 1 164 3.8E-77 T 22-04-2016 PGJ_RS04425 073a601f73c312679d2ed6fcc3a6917e 168 PANTHER PTHR23046:SF2 1 164 3.8E-77 T 22-04-2016 PGJ_RS04425 073a601f73c312679d2ed6fcc3a6917e 168 Pfam PF00731 AIR carboxylase 5 149 1.8E-59 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PGJ_RS04425 073a601f73c312679d2ed6fcc3a6917e 168 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 155 31.049 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PGJ_RS04425 073a601f73c312679d2ed6fcc3a6917e 168 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 158 1.2E-59 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PGJ_RS04425 073a601f73c312679d2ed6fcc3a6917e 168 SMART SM01001 3 151 5.2E-84 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PGJ_RS04425 073a601f73c312679d2ed6fcc3a6917e 168 Gene3D G3DSA:3.40.50.7700 2 160 1.8E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PGJ_RS05450 97ef716cfff6332ddfc4a7c61958e74c 219 Gene3D G3DSA:3.40.50.300 1 218 6.8E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05450 97ef716cfff6332ddfc4a7c61958e74c 219 Pfam PF00005 ABC transporter 21 169 9.9E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS05450 97ef716cfff6332ddfc4a7c61958e74c 219 PANTHER PTHR24220 3 218 7.5E-123 T 22-04-2016 PGJ_RS05450 97ef716cfff6332ddfc4a7c61958e74c 219 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS05450 97ef716cfff6332ddfc4a7c61958e74c 219 PANTHER PTHR24220:SF342 3 218 7.5E-123 T 22-04-2016 PGJ_RS05450 97ef716cfff6332ddfc4a7c61958e74c 219 SUPERFAMILY SSF52540 1 218 4.71E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05450 97ef716cfff6332ddfc4a7c61958e74c 219 SMART SM00382 30 219 1.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS01670 02186fc28a2a6440e0ee9377cadf06e3 428 Gene3D G3DSA:3.20.110.10 2 80 1.8E-10 T 22-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain PGJ_RS01670 02186fc28a2a6440e0ee9377cadf06e3 428 Gene3D G3DSA:3.20.110.10 81 308 2.1E-18 T 22-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain PGJ_RS01670 02186fc28a2a6440e0ee9377cadf06e3 428 SUPERFAMILY SSF88713 4 350 1.63E-66 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PGJ_RS01670 02186fc28a2a6440e0ee9377cadf06e3 428 Pfam PF03065 Glycosyl hydrolase family 57 8 319 1.1E-49 T 22-04-2016 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 PGJ_RS05060 daff3dfb6062db431d859aa467fff9c4 288 PANTHER PTHR21294:SF0 227 282 1.6E-81 T 22-04-2016 PGJ_RS05060 daff3dfb6062db431d859aa467fff9c4 288 PANTHER PTHR21294:SF0 1 205 1.6E-81 T 22-04-2016 PGJ_RS05060 daff3dfb6062db431d859aa467fff9c4 288 SMART SM00893 24 212 1.8E-46 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PGJ_RS05060 daff3dfb6062db431d859aa467fff9c4 288 PANTHER PTHR21294 227 282 1.6E-81 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PGJ_RS05060 daff3dfb6062db431d859aa467fff9c4 288 PANTHER PTHR21294 1 205 1.6E-81 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PGJ_RS05060 daff3dfb6062db431d859aa467fff9c4 288 Pfam PF01012 Electron transfer flavoprotein domain 25 190 4.2E-42 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PGJ_RS05060 daff3dfb6062db431d859aa467fff9c4 288 SUPERFAMILY SSF52402 1 211 2.3E-58 T 22-04-2016 PGJ_RS05060 daff3dfb6062db431d859aa467fff9c4 288 Gene3D G3DSA:3.40.50.620 1 281 3.6E-76 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS05060 daff3dfb6062db431d859aa467fff9c4 288 PIRSF PIRSF000090 1 288 2.1E-74 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PGJ_RS08665 04038c8e6d5b5ba11d0048da7c1a6223 208 Pfam PF00717 Peptidase S24-like 36 96 1.7E-10 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B PGJ_RS08665 04038c8e6d5b5ba11d0048da7c1a6223 208 Gene3D G3DSA:2.10.109.10 26 91 6.7E-21 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PGJ_RS08665 04038c8e6d5b5ba11d0048da7c1a6223 208 Gene3D G3DSA:2.10.109.10 171 205 6.7E-21 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PGJ_RS08665 04038c8e6d5b5ba11d0048da7c1a6223 208 PANTHER PTHR12383:SF14 13 124 1.7E-17 T 22-04-2016 PGJ_RS08665 04038c8e6d5b5ba11d0048da7c1a6223 208 PANTHER PTHR12383:SF14 153 205 1.7E-17 T 22-04-2016 PGJ_RS08665 04038c8e6d5b5ba11d0048da7c1a6223 208 SUPERFAMILY SSF51306 28 205 1.72E-29 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PGJ_RS08665 04038c8e6d5b5ba11d0048da7c1a6223 208 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 30 46 1.1E-10 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS08665 04038c8e6d5b5ba11d0048da7c1a6223 208 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 171 190 1.1E-10 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS08665 04038c8e6d5b5ba11d0048da7c1a6223 208 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 81 93 1.1E-10 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS08665 04038c8e6d5b5ba11d0048da7c1a6223 208 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 18 204 2.9E-22 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS08665 04038c8e6d5b5ba11d0048da7c1a6223 208 PANTHER PTHR12383 13 124 1.7E-17 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS08665 04038c8e6d5b5ba11d0048da7c1a6223 208 PANTHER PTHR12383 153 205 1.7E-17 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PGJ_RS07345 6a72b442c3a1018fa8c0b1ec7b0f1a54 127 Pfam PF07610 Protein of unknown function (DUF1573) 51 94 3.3E-23 T 22-04-2016 IPR011467 Protein of unknown function DUF1573 PGJ_RS07345 6a72b442c3a1018fa8c0b1ec7b0f1a54 127 PANTHER PTHR37833 1 126 1.3E-24 T 22-04-2016 PGJ_RS07345 6a72b442c3a1018fa8c0b1ec7b0f1a54 127 PANTHER PTHR37833:SF1 1 126 1.3E-24 T 22-04-2016 PGJ_RS07345 6a72b442c3a1018fa8c0b1ec7b0f1a54 127 Gene3D G3DSA:2.60.40.360 26 126 1.4E-30 T 22-04-2016 IPR008962 PapD-like PGJ_RS02885 c7324fd5934a501291273f5de4524e6e 543 TIGRFAM TIGR01236 D1pyr5carbox1: 1-pyrroline-5-carboxylate dehydrogenase 13 539 4.5E-235 T 22-04-2016 IPR005931 Delta-1-pyrroline-5-carboxylate dehydrogenase GO:0003842|GO:0006537|GO:0006561 KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853|UniPathway: UPA00261 PGJ_RS02885 c7324fd5934a501291273f5de4524e6e 543 Gene3D G3DSA:3.40.605.10 41 306 4.9E-60 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PGJ_RS02885 c7324fd5934a501291273f5de4524e6e 543 Gene3D G3DSA:3.40.309.10 307 499 5.2E-48 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PGJ_RS02885 c7324fd5934a501291273f5de4524e6e 543 Pfam PF00171 Aldehyde dehydrogenase family 58 525 4.6E-100 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PGJ_RS02885 c7324fd5934a501291273f5de4524e6e 543 PANTHER PTHR11699:SF18 23 538 1.7E-258 T 22-04-2016 PGJ_RS02885 c7324fd5934a501291273f5de4524e6e 543 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 320 331 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PGJ_RS02885 c7324fd5934a501291273f5de4524e6e 543 SUPERFAMILY SSF53720 9 526 4.32E-120 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PGJ_RS02885 c7324fd5934a501291273f5de4524e6e 543 PANTHER PTHR11699 23 538 1.7E-258 T 22-04-2016 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 PANTHER PTHR11777 1 875 0.0 T 22-04-2016 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 SUPERFAMILY SSF101353 255 471 5.1E-65 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 876 155.122 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 Gene3D G3DSA:3.30.930.10 2 250 4.2E-111 T 22-04-2016 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 696 1.6E-16 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 SMART SM00863 654 696 9.7E-18 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 Pfam PF01411 tRNA synthetases class II (A) 6 543 4.7E-193 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 2.1E-29 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 2.1E-29 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 309 322 2.1E-29 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 2.1E-29 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 285 301 2.1E-29 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 SUPERFAMILY SSF55186 552 711 1.96E-46 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 SUPERFAMILY SSF50447 460 540 3.88E-13 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 Pfam PF02272 DHHA1 domain 802 868 2.4E-7 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 SUPERFAMILY SSF55681 3 254 7.46E-98 T 22-04-2016 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 855 4.8E-262 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PGJ_RS03000 b9b12d7cbc858bc05de18c3a72a7b58a 876 PANTHER PTHR11777:SF9 1 875 0.0 T 22-04-2016 PGJ_RS06210 7a01137749eedc18332fd7cd5febf737 558 PANTHER PTHR30445:SF1 10 558 2.1E-183 T 22-04-2016 PGJ_RS06210 7a01137749eedc18332fd7cd5febf737 558 Pfam PF06826 Predicted Permease Membrane Region 383 554 5.5E-33 T 22-04-2016 IPR006512 YidE/YbjL duplication PGJ_RS06210 7a01137749eedc18332fd7cd5febf737 558 Pfam PF06826 Predicted Permease Membrane Region 24 188 2.0E-36 T 22-04-2016 IPR006512 YidE/YbjL duplication PGJ_RS06210 7a01137749eedc18332fd7cd5febf737 558 SUPERFAMILY SSF116726 192 273 7.59E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS06210 7a01137749eedc18332fd7cd5febf737 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 28 176 1.0E-41 T 22-04-2016 IPR006512 YidE/YbjL duplication PGJ_RS06210 7a01137749eedc18332fd7cd5febf737 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 387 541 1.4E-52 T 22-04-2016 IPR006512 YidE/YbjL duplication PGJ_RS06210 7a01137749eedc18332fd7cd5febf737 558 Pfam PF02080 TrkA-C domain 215 274 7.2E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS06210 7a01137749eedc18332fd7cd5febf737 558 Pfam PF02080 TrkA-C domain 304 369 6.1E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS06210 7a01137749eedc18332fd7cd5febf737 558 Gene3D G3DSA:3.30.70.1450 304 373 6.4E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS06210 7a01137749eedc18332fd7cd5febf737 558 PANTHER PTHR30445 10 558 2.1E-183 T 22-04-2016 PGJ_RS06210 7a01137749eedc18332fd7cd5febf737 558 SUPERFAMILY SSF116726 289 369 1.7E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS04745 b5b1191c42ba3230c308169e9c0eb12f 300 SUPERFAMILY SSF46955 67 120 6.41E-7 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS04745 b5b1191c42ba3230c308169e9c0eb12f 300 Pfam PF12728 Helix-turn-helix domain 67 117 5.0E-11 T 22-04-2016 PGJ_RS00600 fd4a83240c494168d3b245639b741c6c 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 246 6.8E-115 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 PGJ_RS00600 fd4a83240c494168d3b245639b741c6c 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 PGJ_RS00600 fd4a83240c494168d3b245639b741c6c 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 43.367 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 PGJ_RS00600 fd4a83240c494168d3b245639b741c6c 248 SUPERFAMILY SSF53254 1 245 3.6E-76 T 22-04-2016 IPR029033 Histidine phosphatase superfamily PGJ_RS00600 fd4a83240c494168d3b245639b741c6c 248 SMART SM00855 3 189 4.7E-25 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PGJ_RS00600 fd4a83240c494168d3b245639b741c6c 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 126 3.5E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PGJ_RS00600 fd4a83240c494168d3b245639b741c6c 248 PANTHER PTHR11931 1 248 7.6E-153 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 PGJ_RS00600 fd4a83240c494168d3b245639b741c6c 248 Gene3D G3DSA:3.40.50.1240 1 248 9.8E-94 T 22-04-2016 IPR029033 Histidine phosphatase superfamily PGJ_RS03410 f3fd2643ce7b4b1907648f2f25e5f24d 66 Pfam PF13808 DDE_Tnp_1-associated 6 56 3.7E-11 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal PGJ_RS07200 ce23ec8af54b05f3f733bb3a5906a554 526 Gene3D G3DSA:2.120.10.10 181 523 1.0E-72 T 22-04-2016 IPR011040 Sialidases PGJ_RS07200 ce23ec8af54b05f3f733bb3a5906a554 526 SUPERFAMILY SSF50939 181 522 1.93E-80 T 22-04-2016 IPR011040 Sialidases PGJ_RS07200 ce23ec8af54b05f3f733bb3a5906a554 526 PANTHER PTHR10628:SF5 176 521 5.3E-47 T 22-04-2016 PGJ_RS07200 ce23ec8af54b05f3f733bb3a5906a554 526 PANTHER PTHR10628 176 521 5.3E-47 T 22-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 PGJ_RS07200 ce23ec8af54b05f3f733bb3a5906a554 526 Pfam PF13088 BNR repeat-like domain 222 499 1.0E-24 T 22-04-2016 IPR011040 Sialidases PGJ_RS00785 0707729001a31d806c29766b1d34ebb1 260 SMART SM00479 68 258 7.0E-4 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PGJ_RS00785 0707729001a31d806c29766b1d34ebb1 260 Pfam PF00929 Exonuclease 70 185 2.4E-7 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PGJ_RS00785 0707729001a31d806c29766b1d34ebb1 260 Gene3D G3DSA:3.30.420.10 69 223 6.2E-18 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS00785 0707729001a31d806c29766b1d34ebb1 260 SUPERFAMILY SSF53098 69 226 7.01E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS01235 c53ead93eef3d7e6027798d72975ff6b 555 Gene3D G3DSA:3.40.50.300 271 490 2.9E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01235 c53ead93eef3d7e6027798d72975ff6b 555 PANTHER PTHR10285 202 514 5.1E-103 T 22-04-2016 PGJ_RS01235 c53ead93eef3d7e6027798d72975ff6b 555 Gene3D G3DSA:3.30.980.10 70 171 1.1E-18 T 22-04-2016 PGJ_RS01235 c53ead93eef3d7e6027798d72975ff6b 555 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 293 490 1.0E-14 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 PGJ_RS01235 c53ead93eef3d7e6027798d72975ff6b 555 SUPERFAMILY SSF55186 68 217 1.01E-26 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PGJ_RS01235 c53ead93eef3d7e6027798d72975ff6b 555 PANTHER PTHR10285:SF45 202 514 5.1E-103 T 22-04-2016 PGJ_RS01235 c53ead93eef3d7e6027798d72975ff6b 555 SMART SM00382 289 450 6.5E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS01235 c53ead93eef3d7e6027798d72975ff6b 555 SUPERFAMILY SSF52540 289 487 1.05E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04820 1e3f5c6ca63fbf63bdfdf16a9e313907 234 Pfam PF10544 T5orf172 domain 8 98 8.4E-11 T 22-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding PGJ_RS04820 1e3f5c6ca63fbf63bdfdf16a9e313907 234 SMART SM00974 17 99 1.1E-12 T 22-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding PGJ_RS08485 b6d6341310626e90b4b56e760d445294 215 PANTHER PTHR30353:SF13 3 215 1.9E-45 T 22-04-2016 PGJ_RS08485 b6d6341310626e90b4b56e760d445294 215 PANTHER PTHR30353 3 215 1.9E-45 T 22-04-2016 IPR032818 DedA family PGJ_RS08485 b6d6341310626e90b4b56e760d445294 215 Pfam PF09335 SNARE associated Golgi protein 37 162 1.2E-19 T 22-04-2016 IPR032816 SNARE associated Golgi protein PGJ_RS07590 78a8165423210f32032a7cdc0d8e2a69 209 Gene3D G3DSA:3.40.50.300 8 208 1.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07590 78a8165423210f32032a7cdc0d8e2a69 209 Pfam PF00005 ABC transporter 23 163 9.6E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS07590 78a8165423210f32032a7cdc0d8e2a69 209 SUPERFAMILY SSF52540 4 209 1.08E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07590 78a8165423210f32032a7cdc0d8e2a69 209 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS07590 78a8165423210f32032a7cdc0d8e2a69 209 SMART SM00382 31 208 3.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS07590 78a8165423210f32032a7cdc0d8e2a69 209 PANTHER PTHR24220 8 206 4.0E-48 T 22-04-2016 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 SUPERFAMILY SSF53244 301 432 3.89E-28 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 Gene3D G3DSA:3.90.190.20 299 431 1.8E-31 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 SUPERFAMILY SSF63418 12 86 1.44E-19 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 Pfam PF08245 Mur ligase middle domain 95 279 4.5E-42 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 Gene3D G3DSA:3.40.1390.10 15 79 4.9E-16 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 Pfam PF01225 Mur ligase family, catalytic domain 15 84 4.9E-8 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 434 29.666 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 PANTHER PTHR23135:SF3 1 433 3.0E-133 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 PANTHER PTHR23135 1 433 3.0E-133 T 22-04-2016 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 Gene3D G3DSA:3.40.1190.10 80 298 3.1E-62 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 SUPERFAMILY SSF53623 90 299 1.57E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 18 432 1.2E-112 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS03705 f0f3d27ed9052b556891c72ba48de050 434 Pfam PF02875 Mur ligase family, glutamate ligase domain 303 361 1.2E-9 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS09040 4172bee5906dd73a12f1ffb94e66190e 1706 Pfam PF08126 Propeptide_C25 24 220 1.5E-91 T 22-04-2016 IPR012600 Gingipain propeptide GO:0004197 PGJ_RS09040 4172bee5906dd73a12f1ffb94e66190e 1706 Pfam PF10365 Domain of unknown function (DUF2436) 1410 1571 3.0E-83 T 22-04-2016 IPR018832 Peptidase C25, gingipain, C-terminal PGJ_RS09040 4172bee5906dd73a12f1ffb94e66190e 1706 Pfam PF10365 Domain of unknown function (DUF2436) 697 856 2.9E-81 T 22-04-2016 IPR018832 Peptidase C25, gingipain, C-terminal PGJ_RS09040 4172bee5906dd73a12f1ffb94e66190e 1706 Pfam PF01364 Peptidase family C25 239 571 4.2E-61 T 22-04-2016 IPR001769 Gingipain GO:0006508|GO:0008234 PGJ_RS09040 4172bee5906dd73a12f1ffb94e66190e 1706 Pfam PF07675 Cleaved Adhesin Domain 965 1132 6.6E-59 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS09040 4172bee5906dd73a12f1ffb94e66190e 1706 Pfam PF07675 Cleaved Adhesin Domain 1142 1311 1.2E-74 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS09040 4172bee5906dd73a12f1ffb94e66190e 1706 Pfam PF03785 Peptidase family C25, C terminal ig-like domain 578 656 2.8E-32 T 22-04-2016 IPR005536 Peptidase C25, Ig-like domain GO:0006508|GO:0008233 PGJ_RS09040 4172bee5906dd73a12f1ffb94e66190e 1706 Gene3D G3DSA:3.40.50.1460 346 574 7.3E-70 T 22-04-2016 IPR029030 Caspase-like domain PGJ_RS09040 4172bee5906dd73a12f1ffb94e66190e 1706 SUPERFAMILY SSF52129 228 575 9.42E-117 T 22-04-2016 IPR029030 Caspase-like domain PGJ_RS09040 4172bee5906dd73a12f1ffb94e66190e 1706 SUPERFAMILY SSF81296 578 658 1.19E-37 T 22-04-2016 IPR014756 Immunoglobulin E-set PGJ_RS09040 4172bee5906dd73a12f1ffb94e66190e 1706 Gene3D G3DSA:3.40.50.10390 229 344 1.7E-41 T 22-04-2016 IPR029031 Gingipain, N-terminal PGJ_RS09040 4172bee5906dd73a12f1ffb94e66190e 1706 Gene3D G3DSA:2.60.40.10 577 661 5.1E-47 T 22-04-2016 IPR013783 Immunoglobulin-like fold PGJ_RS07120 ee870667c0eda3eb1390fbe6093548e2 151 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 9 147 9.8E-56 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 PGJ_RS07120 ee870667c0eda3eb1390fbe6093548e2 151 Gene3D G3DSA:3.90.1180.10 8 146 2.0E-59 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 PGJ_RS07120 ee870667c0eda3eb1390fbe6093548e2 151 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 20 146 27.992 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07120 ee870667c0eda3eb1390fbe6093548e2 151 PANTHER PTHR11545 5 147 2.5E-68 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07120 ee870667c0eda3eb1390fbe6093548e2 151 Pfam PF00572 Ribosomal protein L13 19 142 2.2E-54 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07120 ee870667c0eda3eb1390fbe6093548e2 151 SUPERFAMILY SSF52161 10 148 3.4E-56 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 PGJ_RS07120 ee870667c0eda3eb1390fbe6093548e2 151 PIRSF PIRSF002181 4 151 8.1E-50 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PGJ_RS07120 ee870667c0eda3eb1390fbe6093548e2 151 ProSitePatterns PS00783 Ribosomal protein L13 signature. 110 132 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 PGJ_RS02195 2f4807f5bfd964fc3d5e6a06421e263c 64 Gene3D G3DSA:1.10.287.1040 3 62 9.8E-13 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PGJ_RS02195 2f4807f5bfd964fc3d5e6a06421e263c 64 SUPERFAMILY SSF116842 3 62 4.18E-13 T 22-04-2016 PGJ_RS02195 2f4807f5bfd964fc3d5e6a06421e263c 64 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 7 45 0.002 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PGJ_RS02195 2f4807f5bfd964fc3d5e6a06421e263c 64 Pfam PF02609 Exonuclease VII small subunit 7 58 1.5E-14 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PGJ_RS02195 2f4807f5bfd964fc3d5e6a06421e263c 64 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 6 61 5.2E-17 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PGJ_RS02180 5b8f54185d1d7c4c1cb5e194a4d36e9f 275 PIRSF PIRSF003097 1 267 5.6E-60 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 PGJ_RS02180 5b8f54185d1d7c4c1cb5e194a4d36e9f 275 Pfam PF02687 FtsX-like permease family 150 263 1.7E-9 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS08040 78cbfeacc5d2b047e36c351d3853c01e 185 SUPERFAMILY SSF100950 1 185 2.65E-48 T 22-04-2016 PGJ_RS08040 78cbfeacc5d2b047e36c351d3853c01e 185 PIRSF PIRSF006806 1 182 1.7E-44 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PGJ_RS08040 78cbfeacc5d2b047e36c351d3853c01e 185 PANTHER PTHR23407 1 183 2.5E-49 T 22-04-2016 PGJ_RS08040 78cbfeacc5d2b047e36c351d3853c01e 185 Gene3D G3DSA:3.40.50.10420 2 184 2.2E-53 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PGJ_RS08040 78cbfeacc5d2b047e36c351d3853c01e 185 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 179 2.7E-47 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PGJ_RS08040 78cbfeacc5d2b047e36c351d3853c01e 185 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 179 1.4E-38 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PGJ_RS08040 78cbfeacc5d2b047e36c351d3853c01e 185 PANTHER PTHR23407:SF1 1 183 2.5E-49 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PGJ_RS06055 273a3fb24559ef5042e96e4f7f6c4f32 231 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 216 1.2E-63 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PGJ_RS06055 273a3fb24559ef5042e96e4f7f6c4f32 231 Gene3D G3DSA:3.40.50.300 4 224 6.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06055 273a3fb24559ef5042e96e4f7f6c4f32 231 PANTHER PTHR21299 6 228 3.7E-54 T 22-04-2016 PGJ_RS06055 273a3fb24559ef5042e96e4f7f6c4f32 231 Hamap MF_00238 Cytidylate kinase [cmk]. 5 229 31.245 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PGJ_RS06055 273a3fb24559ef5042e96e4f7f6c4f32 231 SUPERFAMILY SSF52540 1 226 1.14E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06055 273a3fb24559ef5042e96e4f7f6c4f32 231 Pfam PF02224 Cytidylate kinase 7 216 1.7E-63 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PGJ_RS02960 55d0293263e4d73bae6e6ab7a0d17492 175 SUPERFAMILY SSF55729 5 173 1.65E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS02960 55d0293263e4d73bae6e6ab7a0d17492 175 Gene3D G3DSA:3.40.630.30 5 173 7.2E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS02960 55d0293263e4d73bae6e6ab7a0d17492 175 Pfam PF13302 Acetyltransferase (GNAT) domain 10 149 2.6E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 PGJ_RS02960 55d0293263e4d73bae6e6ab7a0d17492 175 PANTHER PTHR13256 1 170 1.1E-25 T 22-04-2016 PGJ_RS05340 1d266a32b9ef9179aebdaf1c058b9f26 253 PANTHER PTHR10516:SF320 113 233 3.3E-45 T 22-04-2016 PGJ_RS05340 1d266a32b9ef9179aebdaf1c058b9f26 253 PANTHER PTHR10516:SF320 31 90 3.3E-45 T 22-04-2016 PGJ_RS05340 1d266a32b9ef9179aebdaf1c058b9f26 253 Gene3D G3DSA:1.10.287.460 33 115 8.9E-16 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PGJ_RS05340 1d266a32b9ef9179aebdaf1c058b9f26 253 SUPERFAMILY SSF54534 34 233 3.54E-50 T 22-04-2016 PGJ_RS05340 1d266a32b9ef9179aebdaf1c058b9f26 253 Gene3D G3DSA:3.10.50.40 116 235 1.3E-46 T 22-04-2016 PGJ_RS05340 1d266a32b9ef9179aebdaf1c058b9f26 253 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 25 135 1.1E-18 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PGJ_RS05340 1d266a32b9ef9179aebdaf1c058b9f26 253 PANTHER PTHR10516 113 233 3.3E-45 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PGJ_RS05340 1d266a32b9ef9179aebdaf1c058b9f26 253 PANTHER PTHR10516 31 90 3.3E-45 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PGJ_RS05340 1d266a32b9ef9179aebdaf1c058b9f26 253 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 142 230 3.3E-24 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 SUPERFAMILY SSF53335 71 314 3.68E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 Gene3D G3DSA:3.40.50.300 1363 1454 4.7E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 SUPERFAMILY SSF52540 1239 1507 1.32E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 Gene3D G3DSA:3.40.50.150 106 312 2.6E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 225 249 4.7E-10 T 22-04-2016 PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 144 4.7E-10 T 22-04-2016 PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 104 120 4.7E-10 T 22-04-2016 PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 192 204 4.7E-10 T 22-04-2016 PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 Pfam PF02384 N-6 DNA Methylase 102 317 2.2E-11 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 Gene3D G3DSA:3.40.50.300 1089 1175 1.1E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 Gene3D G3DSA:3.40.50.300 911 1023 1.1E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 Pfam PF00271 Helicase conserved C-terminal domain 1373 1450 2.2E-6 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 SUPERFAMILY SSF52540 1088 1201 2.28E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05565 f09801bf302935d390719c36f474f280 1830 SUPERFAMILY SSF52540 863 1025 2.28E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01020 4bfc4459092b6314dc4b62b3ed45edd9 897 Pfam PF01841 Transglutaminase-like superfamily 543 612 6.8E-7 T 22-04-2016 IPR002931 Transglutaminase-like PGJ_RS01020 4bfc4459092b6314dc4b62b3ed45edd9 897 Pfam PF01841 Transglutaminase-like superfamily 144 234 2.1E-17 T 22-04-2016 IPR002931 Transglutaminase-like PGJ_RS01020 4bfc4459092b6314dc4b62b3ed45edd9 897 PANTHER PTHR35532:SF3 28 359 5.1E-81 T 22-04-2016 PGJ_RS01020 4bfc4459092b6314dc4b62b3ed45edd9 897 SUPERFAMILY SSF54001 556 612 2.1E-5 T 22-04-2016 PGJ_RS01020 4bfc4459092b6314dc4b62b3ed45edd9 897 SUPERFAMILY SSF54001 92 243 3.31E-29 T 22-04-2016 PGJ_RS01020 4bfc4459092b6314dc4b62b3ed45edd9 897 SMART SM00460 181 240 2.4E-8 T 22-04-2016 IPR002931 Transglutaminase-like PGJ_RS01020 4bfc4459092b6314dc4b62b3ed45edd9 897 PANTHER PTHR35532 28 359 5.1E-81 T 22-04-2016 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 PRINTS PR00096 Glutamine amidotransferase superfamily signature 332 345 3.4E-10 T 22-04-2016 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 PRINTS PR00096 Glutamine amidotransferase superfamily signature 219 228 3.4E-10 T 22-04-2016 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 PRINTS PR00096 Glutamine amidotransferase superfamily signature 247 258 3.4E-10 T 22-04-2016 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 SUPERFAMILY SSF52317 152 355 6.21E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 SUPERFAMILY SSF52021 6 149 2.62E-53 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 7 356 2.1E-132 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 6 143 3.0E-52 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 Gene3D G3DSA:3.50.30.20 6 147 6.6E-60 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 5 357 38.985 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 216 230 9.6E-37 T 22-04-2016 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 180 194 9.6E-37 T 22-04-2016 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 281 9.6E-37 T 22-04-2016 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 289 300 9.6E-37 T 22-04-2016 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 247 263 9.6E-37 T 22-04-2016 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 SMART SM01097 5 144 4.7E-83 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 Gene3D G3DSA:3.40.50.880 160 355 5.2E-61 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 Pfam PF00117 Glutamine amidotransferase class-I 181 355 1.5E-40 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 PANTHER PTHR11405 5 356 8.7E-205 T 22-04-2016 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 PRINTS PR00097 Anthranilate synthase component II signature 247 258 1.6E-5 T 22-04-2016 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 PRINTS PR00097 Anthranilate synthase component II signature 219 228 1.6E-5 T 22-04-2016 PGJ_RS06370 a065fa6b0ea20b8021588dd279bc8470 357 PRINTS PR00097 Anthranilate synthase component II signature 332 345 1.6E-5 T 22-04-2016 PGJ_RS01145 9eb51fd6cbcffe62a39d27318649d0b9 152 Gene3D G3DSA:3.30.300.70 5 72 1.0E-5 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal PGJ_RS01145 9eb51fd6cbcffe62a39d27318649d0b9 152 Pfam PF02576 Putative ribosome maturation factor RimP 22 148 1.7E-14 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 PGJ_RS01145 9eb51fd6cbcffe62a39d27318649d0b9 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 142 12.379 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 PGJ_RS01145 9eb51fd6cbcffe62a39d27318649d0b9 152 SUPERFAMILY SSF75420 5 75 8.5E-8 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal PGJ_RS01145 9eb51fd6cbcffe62a39d27318649d0b9 152 PANTHER PTHR33867 1 152 1.9E-16 T 22-04-2016 PGJ_RS01145 9eb51fd6cbcffe62a39d27318649d0b9 152 PANTHER PTHR33867:SF1 1 152 1.9E-16 T 22-04-2016 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 SUPERFAMILY SSF50037 4 74 3.66E-18 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 133 811 6.9E-188 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 129 149 1.1E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 150 168 1.1E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 196 214 1.1E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 Pfam PF07664 Ferrous iron transport protein B C terminus 586 638 1.5E-21 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 PANTHER PTHR11649:SF37 706 843 1.1E-269 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 PANTHER PTHR11649:SF37 398 670 1.1E-269 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 PANTHER PTHR11649:SF37 1 270 1.1E-269 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 SUPERFAMILY SSF52540 127 294 3.19E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 PANTHER PTHR11649 706 843 1.1E-269 T 22-04-2016 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 PANTHER PTHR11649 398 670 1.1E-269 T 22-04-2016 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 PANTHER PTHR11649 1 270 1.1E-269 T 22-04-2016 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 Pfam PF02421 Ferrous iron transport protein B 128 282 1.2E-60 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 127 282 1.6E-12 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 Pfam PF04023 FeoA domain 1 72 3.0E-18 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 SMART SM00899 1 73 1.4E-23 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 Gene3D G3DSA:3.40.50.300 125 295 1.7E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 Pfam PF07670 Nucleoside recognition 482 576 1.9E-16 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 PGJ_RS02790 dad161a52b894a9cdd40d95557661617 844 Pfam PF07670 Nucleoside recognition 643 815 3.8E-38 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 PGJ_RS05105 f2ef1b00ea21132eb42977fcc695d552 458 SUPERFAMILY SSF109998 263 449 3.43E-15 T 22-04-2016 IPR027304 Trigger factor/SurA domain PGJ_RS05105 f2ef1b00ea21132eb42977fcc695d552 458 TIGRFAM TIGR00115 tig: trigger factor 14 430 4.5E-73 T 22-04-2016 IPR005215 Trigger factor GO:0015031 PGJ_RS05105 f2ef1b00ea21132eb42977fcc695d552 458 Gene3D G3DSA:1.10.3120.10 242 384 1.8E-7 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PGJ_RS05105 f2ef1b00ea21132eb42977fcc695d552 458 PANTHER PTHR30560 1 449 1.7E-28 T 22-04-2016 PGJ_RS05105 f2ef1b00ea21132eb42977fcc695d552 458 SUPERFAMILY SSF102735 1 134 3.79E-27 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PGJ_RS05105 f2ef1b00ea21132eb42977fcc695d552 458 Pfam PF05697 Bacterial trigger factor protein (TF) 1 149 7.3E-33 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PGJ_RS05105 f2ef1b00ea21132eb42977fcc695d552 458 Gene3D G3DSA:3.30.70.1050 1 121 1.5E-29 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PGJ_RS02710 f3806e1d8e2d9a76e6e6d28751cb2e08 552 PANTHER PTHR12994:SF17 3 540 8.9E-159 T 22-04-2016 PGJ_RS02710 f3806e1d8e2d9a76e6e6d28751cb2e08 552 PANTHER PTHR12994 3 540 8.9E-159 T 22-04-2016 PGJ_RS02710 f3806e1d8e2d9a76e6e6d28751cb2e08 552 Pfam PF03577 Peptidase family C69 24 439 5.1E-95 T 22-04-2016 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 PGJ_RS06420 ee43680385936731309193f13633d4e6 1007 SUPERFAMILY SSF52540 276 656 4.25E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06420 ee43680385936731309193f13633d4e6 1007 Pfam PF12705 PD-(D/E)XK nuclease superfamily 702 1005 6.1E-47 T 22-04-2016 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 SUPERFAMILY SSF82693 135 171 2.09E-7 T 22-04-2016 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 Pfam PF00873 AcrB/AcrD/AcrF family 4 998 2.0E-146 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 Gene3D G3DSA:3.30.2090.10 696 783 4.9E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 SUPERFAMILY SSF82866 287 477 2.35E-36 T 22-04-2016 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 SUPERFAMILY SSF82693 256 303 2.09E-7 T 22-04-2016 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 Gene3D G3DSA:1.20.1640.10 274 483 1.7E-45 T 22-04-2016 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 Gene3D G3DSA:1.10.3850.10 813 1001 2.1E-47 T 22-04-2016 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 Gene3D G3DSA:3.30.70.1430 25 126 6.9E-18 T 22-04-2016 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 PANTHER PTHR32063 1 1010 1.8E-209 T 22-04-2016 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 PRINTS PR00702 Acriflavin resistance protein family signature 372 396 1.5E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 PRINTS PR00702 Acriflavin resistance protein family signature 450 473 1.5E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 PRINTS PR00702 Acriflavin resistance protein family signature 425 448 1.5E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 PRINTS PR00702 Acriflavin resistance protein family signature 317 340 1.5E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 PRINTS PR00702 Acriflavin resistance protein family signature 23 41 1.5E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 SUPERFAMILY SSF82693 25 119 6.28E-17 T 22-04-2016 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 SUPERFAMILY SSF82714 172 252 1.28E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 SUPERFAMILY SSF82866 823 1002 1.05E-42 T 22-04-2016 PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 Gene3D G3DSA:3.30.2090.10 172 255 1.7E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PGJ_RS06870 b594f8413cb4f1745dee8b17dc3cb41c 1010 PANTHER PTHR32063:SF0 1 1010 1.8E-209 T 22-04-2016 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 PANTHER PTHR10745 144 505 9.3E-201 T 22-04-2016 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 KEGG: 00970+6.1.1.14 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 PANTHER PTHR10745 9 115 9.3E-201 T 22-04-2016 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 KEGG: 00970+6.1.1.14 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 10 292 1.9E-84 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 5 505 46.219 T 22-04-2016 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 Gene3D G3DSA:3.40.50.800 411 505 4.1E-39 T 22-04-2016 IPR004154 Anticodon-binding PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 212 385 6.8E-10 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 Pfam PF03129 Anticodon binding domain 414 502 7.0E-19 T 22-04-2016 IPR004154 Anticodon-binding PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 PRINTS PR01043 Glycyl-tRNA synthetase signature 193 205 2.0E-47 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 PRINTS PR01043 Glycyl-tRNA synthetase signature 246 263 2.0E-47 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 PRINTS PR01043 Glycyl-tRNA synthetase signature 27 41 2.0E-47 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 PRINTS PR01043 Glycyl-tRNA synthetase signature 263 273 2.0E-47 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 PRINTS PR01043 Glycyl-tRNA synthetase signature 368 380 2.0E-47 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 PRINTS PR01043 Glycyl-tRNA synthetase signature 450 469 2.0E-47 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 PRINTS PR01043 Glycyl-tRNA synthetase signature 214 231 2.0E-47 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 SUPERFAMILY SSF52954 400 504 1.28E-32 T 22-04-2016 IPR004154 Anticodon-binding PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 Gene3D G3DSA:3.30.930.10 9 93 6.1E-139 T 22-04-2016 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 Gene3D G3DSA:3.30.930.10 179 410 6.1E-139 T 22-04-2016 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 SUPERFAMILY SSF55681 8 116 5.72E-116 T 22-04-2016 PGJ_RS09725 083eb8c0b8950e4c6b336001ba983c45 515 SUPERFAMILY SSF55681 145 416 5.72E-116 T 22-04-2016 PGJ_RS07270 9a02e5f290de0224bf9eebd937d13ce8 319 PANTHER PTHR10859:SF86 11 319 8.6E-147 T 22-04-2016 PGJ_RS07270 9a02e5f290de0224bf9eebd937d13ce8 319 SUPERFAMILY SSF53448 8 196 1.13E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS07270 9a02e5f290de0224bf9eebd937d13ce8 319 PANTHER PTHR10859 11 319 8.6E-147 T 22-04-2016 PGJ_RS07270 9a02e5f290de0224bf9eebd937d13ce8 319 Pfam PF00535 Glycosyl transferase family 2 12 175 5.6E-36 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PGJ_RS07270 9a02e5f290de0224bf9eebd937d13ce8 319 Gene3D G3DSA:3.90.550.10 8 144 1.9E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS03495 6462632d1221cee6088d7a35b8e6fe64 146 SUPERFAMILY SSF47413 4 64 4.5E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS03495 6462632d1221cee6088d7a35b8e6fe64 146 SMART SM00530 10 61 2.8E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PGJ_RS03495 6462632d1221cee6088d7a35b8e6fe64 146 Gene3D G3DSA:1.10.260.40 5 59 2.9E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS03495 6462632d1221cee6088d7a35b8e6fe64 146 Pfam PF01381 Helix-turn-helix 14 58 4.8E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PGJ_RS05215 6f0342e0eae38b9f19f61f71244e500b 304 Gene3D G3DSA:3.60.15.10 6 304 2.0E-77 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS05215 6f0342e0eae38b9f19f61f71244e500b 304 PANTHER PTHR12553 184 304 2.5E-64 T 22-04-2016 PGJ_RS05215 6f0342e0eae38b9f19f61f71244e500b 304 PANTHER PTHR12553 6 154 2.5E-64 T 22-04-2016 PGJ_RS05215 6f0342e0eae38b9f19f61f71244e500b 304 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 6 303 1.8E-101 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 PGJ_RS05215 6f0342e0eae38b9f19f61f71244e500b 304 Hamap MF_01818 Ribonuclease BN [rbn]. 4 304 33.725 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 PGJ_RS05215 6f0342e0eae38b9f19f61f71244e500b 304 Pfam PF00753 Metallo-beta-lactamase superfamily 26 91 3.2E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS05215 6f0342e0eae38b9f19f61f71244e500b 304 Pfam PF12706 Beta-lactamase superfamily domain 204 272 1.2E-8 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS05215 6f0342e0eae38b9f19f61f71244e500b 304 SUPERFAMILY SSF56281 6 304 7.08E-69 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS00970 803f0988b3577bea2d17f51f38f6e2c1 468 Gene3D G3DSA:3.30.950.10 119 229 5.8E-9 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PGJ_RS00970 803f0988b3577bea2d17f51f38f6e2c1 468 Gene3D G3DSA:3.40.1010.10 4 118 1.2E-25 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PGJ_RS00970 803f0988b3577bea2d17f51f38f6e2c1 468 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 6 244 9.0E-103 T 22-04-2016 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 PGJ_RS00970 803f0988b3577bea2d17f51f38f6e2c1 468 SUPERFAMILY SSF53790 3 246 2.75E-56 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PGJ_RS00970 803f0988b3577bea2d17f51f38f6e2c1 468 Gene3D G3DSA:3.40.50.10230 255 455 3.3E-70 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 PGJ_RS00970 803f0988b3577bea2d17f51f38f6e2c1 468 PANTHER PTHR32439:SF1 249 454 4.2E-53 T 22-04-2016 PGJ_RS00970 803f0988b3577bea2d17f51f38f6e2c1 468 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 213 3.8E-39 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PGJ_RS00970 803f0988b3577bea2d17f51f38f6e2c1 468 SUPERFAMILY SSF63965 256 455 2.49E-61 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 PGJ_RS00970 803f0988b3577bea2d17f51f38f6e2c1 468 PIRSF PIRSF004874 1 468 8.1E-175 T 22-04-2016 IPR014422 Cobalamin (vitamin B12) biosynthesis, bifunctional CbiH/CbiC GO:0009236 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-+5.4.99.60|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148 PGJ_RS00970 803f0988b3577bea2d17f51f38f6e2c1 468 Pfam PF02570 Precorrin-8X methylmutase 258 454 3.9E-64 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 PGJ_RS00970 803f0988b3577bea2d17f51f38f6e2c1 468 PANTHER PTHR32439 249 454 4.2E-53 T 22-04-2016 PGJ_RS03920 44d43397540876950c2f14ac6ddc0327 335 PANTHER PTHR11751 1 333 8.3E-48 T 22-04-2016 PGJ_RS03920 44d43397540876950c2f14ac6ddc0327 335 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 189 202 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 PGJ_RS03920 44d43397540876950c2f14ac6ddc0327 335 Pfam PF00155 Aminotransferase class I and II 37 330 1.2E-26 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PGJ_RS03920 44d43397540876950c2f14ac6ddc0327 335 SUPERFAMILY SSF53383 18 332 2.78E-61 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS03920 44d43397540876950c2f14ac6ddc0327 335 Gene3D G3DSA:3.40.640.10 32 230 6.3E-53 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS03920 44d43397540876950c2f14ac6ddc0327 335 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 13 331 2.1E-89 T 22-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 PGJ_RS03920 44d43397540876950c2f14ac6ddc0327 335 Gene3D G3DSA:3.90.1150.10 231 333 1.4E-19 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS03920 44d43397540876950c2f14ac6ddc0327 335 PANTHER PTHR11751:SF338 1 333 8.3E-48 T 22-04-2016 PGJ_RS02670 769ce3c16bcc2af379a395cdc9dcdfca 361 Pfam PF01609 Transposase DDE domain 143 348 5.5E-48 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS02670 769ce3c16bcc2af379a395cdc9dcdfca 361 Pfam PF05598 Transposase domain (DUF772) 59 133 1.1E-22 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS02670 769ce3c16bcc2af379a395cdc9dcdfca 361 PANTHER PTHR35604 12 177 1.4E-31 T 22-04-2016 PGJ_RS02670 769ce3c16bcc2af379a395cdc9dcdfca 361 PANTHER PTHR35604 203 359 1.4E-31 T 22-04-2016 PGJ_RS03570 a01cda16c858a6c1fe36846b348612b8 335 Gene3D G3DSA:3.40.50.620 7 198 1.6E-79 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS03570 a01cda16c858a6c1fe36846b348612b8 335 SMART SM00893 9 197 2.4E-56 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PGJ_RS03570 a01cda16c858a6c1fe36846b348612b8 335 SUPERFAMILY SSF52467 208 328 4.07E-44 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS03570 a01cda16c858a6c1fe36846b348612b8 335 Gene3D G3DSA:3.40.50.1220 202 329 5.9E-54 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS03570 a01cda16c858a6c1fe36846b348612b8 335 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 208 291 1.7E-33 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal PGJ_RS03570 a01cda16c858a6c1fe36846b348612b8 335 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 272 298 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site PGJ_RS03570 a01cda16c858a6c1fe36846b348612b8 335 PIRSF PIRSF000089 5 333 1.6E-116 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 PGJ_RS03570 a01cda16c858a6c1fe36846b348612b8 335 Pfam PF01012 Electron transfer flavoprotein domain 9 186 3.5E-51 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PGJ_RS03570 a01cda16c858a6c1fe36846b348612b8 335 SUPERFAMILY SSF52402 7 192 1.05E-56 T 22-04-2016 PGJ_RS03570 a01cda16c858a6c1fe36846b348612b8 335 PANTHER PTHR10909 140 327 1.5E-47 T 22-04-2016 PGJ_RS03570 a01cda16c858a6c1fe36846b348612b8 335 PANTHER PTHR10909:SF294 140 327 1.5E-47 T 22-04-2016 PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 Pfam PF16124 RecQ zinc-binding 581 628 3.0E-10 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 Gene3D G3DSA:1.10.10.10 583 665 1.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 SMART SM00487 78 274 3.6E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 Pfam PF00270 DEAD/DEAH box helicase 84 244 5.7E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 SUPERFAMILY SSF52540 122 404 5.69E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 Gene3D G3DSA:3.40.50.300 72 262 4.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 Gene3D G3DSA:3.40.50.300 263 400 9.8E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 Pfam PF00271 Helicase conserved C-terminal domain 281 386 8.2E-17 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 PANTHER PTHR13710:SF81 53 405 3.7E-165 T 22-04-2016 PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 PANTHER PTHR13710:SF81 580 632 3.7E-165 T 22-04-2016 PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 72 430 2.0E-108 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 PANTHER PTHR13710 53 405 3.7E-165 T 22-04-2016 PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 PANTHER PTHR13710 580 632 3.7E-165 T 22-04-2016 PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 SMART SM00490 305 386 4.3E-26 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS07945 625160764878b81526aad2b4258f57dc 707 Gene3D G3DSA:1.10.10.10 524 582 7.6E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS04200 046bdd5ad60d99f60d26d778a705dd43 246 PANTHER PTHR39200 1 228 7.1E-16 T 22-04-2016 PGJ_RS04200 046bdd5ad60d99f60d26d778a705dd43 246 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 49 228 4.0E-39 T 22-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain PGJ_RS04200 046bdd5ad60d99f60d26d778a705dd43 246 PANTHER PTHR39200:SF1 1 228 7.1E-16 T 22-04-2016 PGJ_RS02745 b33849bb16e0c11922ffd1d366255916 955 SUPERFAMILY SSF53383 480 881 5.2E-87 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS02745 b33849bb16e0c11922ffd1d366255916 955 SUPERFAMILY SSF53383 924 944 5.2E-87 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS02745 b33849bb16e0c11922ffd1d366255916 955 PANTHER PTHR11773 6 942 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PGJ_RS02745 b33849bb16e0c11922ffd1d366255916 955 SUPERFAMILY SSF53383 9 436 9.81E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS02745 b33849bb16e0c11922ffd1d366255916 955 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 9 944 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 PGJ_RS02745 b33849bb16e0c11922ffd1d366255916 955 Pfam PF02347 Glycine cleavage system P-protein 479 732 1.9E-7 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PGJ_RS02745 b33849bb16e0c11922ffd1d366255916 955 Pfam PF02347 Glycine cleavage system P-protein 8 439 4.5E-167 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PGJ_RS02745 b33849bb16e0c11922ffd1d366255916 955 Gene3D G3DSA:3.40.640.10 501 741 9.5E-36 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS02745 b33849bb16e0c11922ffd1d366255916 955 Gene3D G3DSA:3.40.640.10 78 301 3.1E-12 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS02745 b33849bb16e0c11922ffd1d366255916 955 PANTHER PTHR11773:SF1 6 942 0.0 T 22-04-2016 PGJ_RS01005 c6222b5b2594fa460457e9bfc63ab24d 155 TIGRFAM TIGR01201 HU_rel: putative DNA-binding protein 1 155 1.3E-49 T 22-04-2016 IPR005902 Putative DNA-binding protein, HU-related PGJ_RS01005 c6222b5b2594fa460457e9bfc63ab24d 155 Pfam PF00216 Bacterial DNA-binding protein 36 85 6.8E-6 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS01005 c6222b5b2594fa460457e9bfc63ab24d 155 Gene3D G3DSA:4.10.520.10 35 115 6.5E-8 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS01005 c6222b5b2594fa460457e9bfc63ab24d 155 SUPERFAMILY SSF47729 33 120 5.3E-13 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS03830 d3f8586170674da56b91f2bebafeccb8 378 SUPERFAMILY SSF52833 260 370 2.57E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS03830 d3f8586170674da56b91f2bebafeccb8 378 Gene3D G3DSA:3.40.30.10 260 365 2.8E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS03830 d3f8586170674da56b91f2bebafeccb8 378 Pfam PF14289 Domain of unknown function (DUF4369) 23 115 3.0E-7 T 22-04-2016 IPR025380 Domain of unknown function DUF4369 PGJ_RS01790 453a364b01769f9f94274e1c03e88717 134 PANTHER PTHR21366 1 133 1.6E-33 T 22-04-2016 PGJ_RS01790 453a364b01769f9f94274e1c03e88717 134 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 5 131 4.1E-48 T 22-04-2016 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384 PGJ_RS01790 453a364b01769f9f94274e1c03e88717 134 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 115 1.1E-23 T 22-04-2016 PGJ_RS01790 453a364b01769f9f94274e1c03e88717 134 Gene3D G3DSA:3.10.180.10 2 132 2.8E-42 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PGJ_RS01790 453a364b01769f9f94274e1c03e88717 134 PANTHER PTHR21366:SF0 1 133 1.6E-33 T 22-04-2016 PGJ_RS01790 453a364b01769f9f94274e1c03e88717 134 SUPERFAMILY SSF54593 1 132 3.36E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PGJ_RS08720 2a46a8a4d524a02d00c684afbe21ce81 323 PANTHER PTHR11138 6 316 1.9E-95 T 22-04-2016 PGJ_RS08720 2a46a8a4d524a02d00c684afbe21ce81 323 Gene3D G3DSA:3.40.50.170 5 199 5.3E-61 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PGJ_RS08720 2a46a8a4d524a02d00c684afbe21ce81 323 Pfam PF00551 Formyl transferase 7 184 2.5E-36 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PGJ_RS08720 2a46a8a4d524a02d00c684afbe21ce81 323 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 6 317 33.169 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PGJ_RS08720 2a46a8a4d524a02d00c684afbe21ce81 323 Gene3D G3DSA:3.10.25.10 214 320 2.1E-28 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PGJ_RS08720 2a46a8a4d524a02d00c684afbe21ce81 323 SUPERFAMILY SSF53328 5 198 9.16E-58 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PGJ_RS08720 2a46a8a4d524a02d00c684afbe21ce81 323 Pfam PF02911 Formyl transferase, C-terminal domain 211 314 1.9E-22 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PGJ_RS08720 2a46a8a4d524a02d00c684afbe21ce81 323 SUPERFAMILY SSF50486 213 317 1.1E-25 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 PGJ_RS08720 2a46a8a4d524a02d00c684afbe21ce81 323 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 7 314 6.2E-74 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PGJ_RS02360 6d04525ca959b81b839431d15e7652cf 485 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 440 464 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 PGJ_RS02360 6d04525ca959b81b839431d15e7652cf 485 PANTHER PTHR30474:SF1 321 483 3.8E-110 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 PGJ_RS02360 6d04525ca959b81b839431d15e7652cf 485 PANTHER PTHR30474:SF1 13 208 3.8E-110 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 PGJ_RS02360 6d04525ca959b81b839431d15e7652cf 485 PANTHER PTHR30474 321 483 3.8E-110 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PGJ_RS02360 6d04525ca959b81b839431d15e7652cf 485 PANTHER PTHR30474 13 208 3.8E-110 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PGJ_RS02360 6d04525ca959b81b839431d15e7652cf 485 Pfam PF01098 Cell cycle protein 252 480 2.7E-46 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PGJ_RS02360 6d04525ca959b81b839431d15e7652cf 485 Pfam PF01098 Cell cycle protein 17 203 2.0E-19 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PGJ_RS00245 069cd510f86470b93103b93be22143a4 197 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 189 1.5E-54 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 PGJ_RS00245 069cd510f86470b93103b93be22143a4 197 PANTHER PTHR39321 1 194 1.2E-25 T 22-04-2016 PGJ_RS00245 069cd510f86470b93103b93be22143a4 197 SUPERFAMILY SSF52374 3 178 1.51E-42 T 22-04-2016 PGJ_RS00245 069cd510f86470b93103b93be22143a4 197 Pfam PF01467 Cytidylyltransferase-like 5 164 1.4E-20 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PGJ_RS00245 069cd510f86470b93103b93be22143a4 197 Gene3D G3DSA:3.40.50.620 2 178 6.2E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS00245 069cd510f86470b93103b93be22143a4 197 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 191 23.811 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 PGJ_RS03550 7fba253bdc5068c60a99ede621b771c6 263 Gene3D G3DSA:3.30.30.60 33 84 1.3E-26 T 22-04-2016 IPR028991 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal GO:0046983 PGJ_RS03550 7fba253bdc5068c60a99ede621b771c6 263 SUPERFAMILY SSF52242 103 260 3.66E-41 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PGJ_RS03550 7fba253bdc5068c60a99ede621b771c6 263 Pfam PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase 22 98 6.3E-35 T 22-04-2016 IPR028991 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal GO:0046983 PGJ_RS03550 7fba253bdc5068c60a99ede621b771c6 263 SUPERFAMILY SSF117778 33 84 3.14E-20 T 22-04-2016 IPR028991 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal GO:0046983 PGJ_RS03550 7fba253bdc5068c60a99ede621b771c6 263 Gene3D G3DSA:3.40.50.280 104 261 2.3E-48 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PGJ_RS03550 7fba253bdc5068c60a99ede621b771c6 263 Pfam PF02310 B12 binding domain 122 246 1.9E-19 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PGJ_RS08340 2d9319dad69fa4ccfa1cfd4f7e882539 121 SUPERFAMILY SSF50193 1 121 3.14E-48 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PGJ_RS08340 2d9319dad69fa4ccfa1cfd4f7e882539 121 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site PGJ_RS08340 2d9319dad69fa4ccfa1cfd4f7e882539 121 Pfam PF00238 Ribosomal protein L14p/L23e 1 121 3.1E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PGJ_RS08340 2d9319dad69fa4ccfa1cfd4f7e882539 121 SMART SM01374 1 121 2.3E-81 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PGJ_RS08340 2d9319dad69fa4ccfa1cfd4f7e882539 121 PANTHER PTHR11761 1 121 7.5E-68 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PGJ_RS08340 2d9319dad69fa4ccfa1cfd4f7e882539 121 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 121 25.306 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PGJ_RS08340 2d9319dad69fa4ccfa1cfd4f7e882539 121 Gene3D G3DSA:2.40.150.20 1 121 2.7E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PGJ_RS08340 2d9319dad69fa4ccfa1cfd4f7e882539 121 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 121 5.0E-52 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 PGJ_RS03985 be5228f5244ca818d09ffe7ad17e120a 194 Gene3D G3DSA:3.40.50.10420 30 193 6.5E-35 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PGJ_RS03985 be5228f5244ca818d09ffe7ad17e120a 194 PANTHER PTHR32479:SF11 30 193 3.4E-27 T 22-04-2016 PGJ_RS03985 be5228f5244ca818d09ffe7ad17e120a 194 SUPERFAMILY SSF100950 29 193 7.11E-32 T 22-04-2016 PGJ_RS03985 be5228f5244ca818d09ffe7ad17e120a 194 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 96 193 2.1E-16 T 22-04-2016 IPR003741 LUD domain PGJ_RS03985 be5228f5244ca818d09ffe7ad17e120a 194 PANTHER PTHR32479 30 193 3.4E-27 T 22-04-2016 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 447 3.3E-42 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 Gene3D G3DSA:3.40.50.300 743 901 2.1E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 Gene3D G3DSA:3.40.50.300 465 605 2.1E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 Pfam PF13361 UvrD-like helicase C-terminal domain 745 848 2.3E-8 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 Gene3D G3DSA:3.40.50.300 348 448 1.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 Gene3D G3DSA:3.40.50.300 10 57 1.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 Gene3D G3DSA:3.40.50.300 107 167 1.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 PANTHER PTHR11070:SF24 551 791 7.0E-91 T 22-04-2016 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 PANTHER PTHR11070:SF24 312 514 7.0E-91 T 22-04-2016 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 PANTHER PTHR11070:SF24 99 182 7.0E-91 T 22-04-2016 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 PANTHER PTHR11070:SF24 6 70 7.0E-91 T 22-04-2016 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 PANTHER PTHR11070:SF24 828 1072 7.0E-91 T 22-04-2016 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 PANTHER PTHR11070 551 791 7.0E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 PANTHER PTHR11070 312 514 7.0E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 PANTHER PTHR11070 99 182 7.0E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 PANTHER PTHR11070 6 70 7.0E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 PANTHER PTHR11070 828 1072 7.0E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 SUPERFAMILY SSF52540 7 61 8.18E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 SUPERFAMILY SSF52540 829 854 8.18E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 SUPERFAMILY SSF52540 525 777 8.18E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 SUPERFAMILY SSF52540 338 489 8.18E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09275 fd12a35d60a243b985188bcd993eb58d 1074 SUPERFAMILY SSF52540 99 179 8.18E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08725 800ce4673f34d0234f3e45266f54e1c5 113 Pfam PF13560 Helix-turn-helix domain 5 60 5.1E-10 T 22-04-2016 PGJ_RS08725 800ce4673f34d0234f3e45266f54e1c5 113 Gene3D G3DSA:1.10.260.40 2 67 3.9E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS08725 800ce4673f34d0234f3e45266f54e1c5 113 SMART SM00530 7 62 3.7E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PGJ_RS08725 800ce4673f34d0234f3e45266f54e1c5 113 SUPERFAMILY SSF47413 2 66 3.56E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS06450 e7ea2094cd6a51664064cfc58a57c965 410 PANTHER PTHR35793:SF2 3 410 1.5E-190 T 22-04-2016 PGJ_RS06450 e7ea2094cd6a51664064cfc58a57c965 410 Pfam PF07670 Nucleoside recognition 52 154 1.8E-9 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 PGJ_RS06450 e7ea2094cd6a51664064cfc58a57c965 410 PANTHER PTHR35793 3 410 1.5E-190 T 22-04-2016 PGJ_RS06450 e7ea2094cd6a51664064cfc58a57c965 410 PIRSF PIRSF036542 2 410 2.4E-164 T 22-04-2016 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB PGJ_RS05275 43eac75929a9695ab8a661306d9b2037 129 Pfam PF08308 PEGA domain 35 80 2.0E-9 T 22-04-2016 IPR013229 PEGA PGJ_RS07875 414c238585ffadf35df98da98632ffdb 254 SUPERFAMILY SSF53448 5 251 1.67E-56 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS07875 414c238585ffadf35df98da98632ffdb 254 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 3 249 36.481 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PGJ_RS07875 414c238585ffadf35df98da98632ffdb 254 Pfam PF02348 Cytidylyltransferase 6 223 8.4E-49 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PGJ_RS07875 414c238585ffadf35df98da98632ffdb 254 Gene3D G3DSA:3.90.550.10 5 249 3.0E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS07875 414c238585ffadf35df98da98632ffdb 254 PANTHER PTHR21485 1 254 1.2E-100 T 22-04-2016 PGJ_RS07875 414c238585ffadf35df98da98632ffdb 254 PANTHER PTHR21485:SF4 1 254 1.2E-100 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PGJ_RS07875 414c238585ffadf35df98da98632ffdb 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 6 242 1.1E-67 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PGJ_RS06605 54d8ba4516586fcd09cd5e179341258a 112 PANTHER PTHR33909:SF1 1 97 4.8E-26 T 22-04-2016 PGJ_RS06605 54d8ba4516586fcd09cd5e179341258a 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 5.1E-15 T 22-04-2016 IPR003849 Preprotein translocase YajC PGJ_RS06605 54d8ba4516586fcd09cd5e179341258a 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 5.1E-15 T 22-04-2016 IPR003849 Preprotein translocase YajC PGJ_RS06605 54d8ba4516586fcd09cd5e179341258a 112 PANTHER PTHR33909 1 97 4.8E-26 T 22-04-2016 PGJ_RS06605 54d8ba4516586fcd09cd5e179341258a 112 SMART SM01323 18 100 4.2E-36 T 22-04-2016 IPR003849 Preprotein translocase YajC PGJ_RS06605 54d8ba4516586fcd09cd5e179341258a 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 96 2.6E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC PGJ_RS06605 54d8ba4516586fcd09cd5e179341258a 112 Pfam PF02699 Preprotein translocase subunit 22 96 1.0E-28 T 22-04-2016 IPR003849 Preprotein translocase YajC PGJ_RS04865 b04911d1edb3e1fe36e82c69e21f28c3 361 Pfam PF05598 Transposase domain (DUF772) 59 133 1.2E-21 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS04865 b04911d1edb3e1fe36e82c69e21f28c3 361 Pfam PF01609 Transposase DDE domain 143 348 4.0E-48 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS04865 b04911d1edb3e1fe36e82c69e21f28c3 361 PANTHER PTHR35604 12 174 7.0E-30 T 22-04-2016 PGJ_RS04865 b04911d1edb3e1fe36e82c69e21f28c3 361 PANTHER PTHR35604 203 359 7.0E-30 T 22-04-2016 PGJ_RS05545 4308750c4a625efc0d86d2a2fe12c6f9 100 Pfam PF12728 Helix-turn-helix domain 43 92 1.7E-10 T 22-04-2016 PGJ_RS05545 4308750c4a625efc0d86d2a2fe12c6f9 100 Gene3D G3DSA:1.10.10.10 42 92 1.6E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS05545 4308750c4a625efc0d86d2a2fe12c6f9 100 SUPERFAMILY SSF46955 42 94 1.19E-11 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS05545 4308750c4a625efc0d86d2a2fe12c6f9 100 PANTHER PTHR34585 3 94 3.2E-28 T 22-04-2016 PGJ_RS05545 4308750c4a625efc0d86d2a2fe12c6f9 100 PANTHER PTHR34585:SF11 3 94 3.2E-28 T 22-04-2016 PGJ_RS02675 4717db24a2c84d31844935732b106632 188 PANTHER PTHR30173:SF24 1 185 1.2E-34 T 22-04-2016 PGJ_RS02675 4717db24a2c84d31844935732b106632 188 Pfam PF08281 Sigma-70, region 4 129 180 9.7E-14 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS02675 4717db24a2c84d31844935732b106632 188 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 51 82 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS02675 4717db24a2c84d31844935732b106632 188 Gene3D G3DSA:1.10.10.10 122 185 3.6E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS02675 4717db24a2c84d31844935732b106632 188 Pfam PF04542 Sigma-70 region 2 30 95 8.1E-13 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS02675 4717db24a2c84d31844935732b106632 188 PANTHER PTHR30173 1 185 1.2E-34 T 22-04-2016 PGJ_RS02675 4717db24a2c84d31844935732b106632 188 SUPERFAMILY SSF88946 8 105 1.02E-22 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS02675 4717db24a2c84d31844935732b106632 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 183 6.5E-29 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS02675 4717db24a2c84d31844935732b106632 188 Gene3D G3DSA:1.10.1740.10 8 102 1.1E-26 T 22-04-2016 PGJ_RS02675 4717db24a2c84d31844935732b106632 188 SUPERFAMILY SSF88659 132 185 5.42E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS05290 0cc400e29d4cc3a29b7744fccc61d2e6 202 Gene3D G3DSA:3.90.1720.10 66 193 4.9E-33 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PGJ_RS05290 0cc400e29d4cc3a29b7744fccc61d2e6 202 PANTHER PTHR21666 64 191 1.4E-18 T 22-04-2016 PGJ_RS05290 0cc400e29d4cc3a29b7744fccc61d2e6 202 Pfam PF00877 NlpC/P60 family 78 187 2.6E-20 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PGJ_RS05290 0cc400e29d4cc3a29b7744fccc61d2e6 202 SUPERFAMILY SSF54001 65 193 3.19E-30 T 22-04-2016 PGJ_RS00790 fccbe8ae49015766faa18b3e50a8583b 117 SMART SM00347 14 116 1.5E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PGJ_RS00790 fccbe8ae49015766faa18b3e50a8583b 117 SUPERFAMILY SSF46785 4 109 1.41E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS00790 fccbe8ae49015766faa18b3e50a8583b 117 Pfam PF13463 Winged helix DNA-binding domain 24 86 1.5E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PGJ_RS00790 fccbe8ae49015766faa18b3e50a8583b 117 Gene3D G3DSA:1.10.10.10 2 96 1.9E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS00410 b76a6d449fe1df4471523f524caf3d75 501 PANTHER PTHR30026 20 86 5.8E-129 T 22-04-2016 PGJ_RS00410 b76a6d449fe1df4471523f524caf3d75 501 PANTHER PTHR30026 112 499 5.8E-129 T 22-04-2016 PGJ_RS00410 b76a6d449fe1df4471523f524caf3d75 501 Pfam PF02321 Outer membrane efflux protein 98 280 5.7E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS00410 b76a6d449fe1df4471523f524caf3d75 501 Pfam PF02321 Outer membrane efflux protein 26 77 4.0E-7 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS00410 b76a6d449fe1df4471523f524caf3d75 501 Pfam PF02321 Outer membrane efflux protein 307 491 4.7E-32 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS00410 b76a6d449fe1df4471523f524caf3d75 501 PANTHER PTHR30026:SF6 20 86 5.8E-129 T 22-04-2016 PGJ_RS00410 b76a6d449fe1df4471523f524caf3d75 501 PANTHER PTHR30026:SF6 112 499 5.8E-129 T 22-04-2016 PGJ_RS00410 b76a6d449fe1df4471523f524caf3d75 501 SUPERFAMILY SSF56954 144 494 3.66E-82 T 22-04-2016 PGJ_RS00410 b76a6d449fe1df4471523f524caf3d75 501 SUPERFAMILY SSF56954 1 76 3.66E-82 T 22-04-2016 PGJ_RS00410 b76a6d449fe1df4471523f524caf3d75 501 Gene3D G3DSA:1.20.1600.10 141 496 9.4E-81 T 22-04-2016 PGJ_RS00410 b76a6d449fe1df4471523f524caf3d75 501 Gene3D G3DSA:1.20.1600.10 22 82 9.4E-81 T 22-04-2016 PGJ_RS09620 0907dd5f0e2fd7eaba6ae95608c1758b 1099 Pfam PF11028 Protein of unknown function (DUF2723) 37 223 1.9E-71 T 22-04-2016 IPR021280 Protein of unknown function DUF2723 PGJ_RS09620 0907dd5f0e2fd7eaba6ae95608c1758b 1099 PANTHER PTHR16214 1 240 2.1E-238 T 22-04-2016 PGJ_RS09620 0907dd5f0e2fd7eaba6ae95608c1758b 1099 PANTHER PTHR16214 849 1090 2.1E-238 T 22-04-2016 PGJ_RS09620 0907dd5f0e2fd7eaba6ae95608c1758b 1099 PANTHER PTHR16214 628 754 2.1E-238 T 22-04-2016 PGJ_RS09620 0907dd5f0e2fd7eaba6ae95608c1758b 1099 PANTHER PTHR16214 364 410 2.1E-238 T 22-04-2016 PGJ_RS09620 0907dd5f0e2fd7eaba6ae95608c1758b 1099 PANTHER PTHR16214 487 612 2.1E-238 T 22-04-2016 PGJ_RS09620 0907dd5f0e2fd7eaba6ae95608c1758b 1099 PANTHER PTHR16214:SF2 1 240 2.1E-238 T 22-04-2016 PGJ_RS09620 0907dd5f0e2fd7eaba6ae95608c1758b 1099 PANTHER PTHR16214:SF2 849 1090 2.1E-238 T 22-04-2016 PGJ_RS09620 0907dd5f0e2fd7eaba6ae95608c1758b 1099 PANTHER PTHR16214:SF2 628 754 2.1E-238 T 22-04-2016 PGJ_RS09620 0907dd5f0e2fd7eaba6ae95608c1758b 1099 PANTHER PTHR16214:SF2 364 410 2.1E-238 T 22-04-2016 PGJ_RS09620 0907dd5f0e2fd7eaba6ae95608c1758b 1099 PANTHER PTHR16214:SF2 487 612 2.1E-238 T 22-04-2016 PGJ_RS03695 d59e662c5987b5450b5a34e811556cb0 255 Gene3D G3DSA:3.40.50.150 25 241 8.1E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS03695 d59e662c5987b5450b5a34e811556cb0 255 PANTHER PTHR18895:SF73 27 238 1.9E-48 T 22-04-2016 PGJ_RS03695 d59e662c5987b5450b5a34e811556cb0 255 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 4 248 51.371 T 22-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 PGJ_RS03695 d59e662c5987b5450b5a34e811556cb0 255 Pfam PF05175 Methyltransferase small domain 43 170 2.5E-16 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 PGJ_RS03695 d59e662c5987b5450b5a34e811556cb0 255 PANTHER PTHR18895 27 238 1.9E-48 T 22-04-2016 PGJ_RS03695 d59e662c5987b5450b5a34e811556cb0 255 SUPERFAMILY SSF53335 3 175 3.73E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS03695 d59e662c5987b5450b5a34e811556cb0 255 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 118 124 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PGJ_RS02555 fcf407638050058e46422b3ad57fe2c0 154 SUPERFAMILY SSF55620 25 129 1.26E-27 T 22-04-2016 PGJ_RS02555 fcf407638050058e46422b3ad57fe2c0 154 PANTHER PTHR34354 1 149 5.2E-67 T 22-04-2016 PGJ_RS02555 fcf407638050058e46422b3ad57fe2c0 154 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 26 137 1.7E-53 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS02555 fcf407638050058e46422b3ad57fe2c0 154 PANTHER PTHR34354:SF1 1 149 5.2E-67 T 22-04-2016 PGJ_RS02555 fcf407638050058e46422b3ad57fe2c0 154 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 154 63.326 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS02555 fcf407638050058e46422b3ad57fe2c0 154 PIRSF PIRSF027377 6 145 1.2E-61 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS02555 fcf407638050058e46422b3ad57fe2c0 154 Gene3D G3DSA:3.30.1130.10 14 146 1.6E-57 T 22-04-2016 PGJ_RS02555 fcf407638050058e46422b3ad57fe2c0 154 Pfam PF14489 QueF-like protein 60 138 1.4E-35 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS06640 25ca29ac9a706901f8bc7eb8a0b4837a 281 PANTHER PTHR21299 1 277 1.4E-117 T 22-04-2016 PGJ_RS06640 25ca29ac9a706901f8bc7eb8a0b4837a 281 Gene3D G3DSA:3.40.50.620 1 174 1.8E-72 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS06640 25ca29ac9a706901f8bc7eb8a0b4837a 281 Gene3D G3DSA:3.30.1300.10 178 278 4.7E-23 T 22-04-2016 PGJ_RS06640 25ca29ac9a706901f8bc7eb8a0b4837a 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 277 2.2E-88 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PGJ_RS06640 25ca29ac9a706901f8bc7eb8a0b4837a 281 Pfam PF02569 Pantoate-beta-alanine ligase 3 277 9.1E-100 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PGJ_RS06640 25ca29ac9a706901f8bc7eb8a0b4837a 281 PANTHER PTHR21299:SF1 1 277 1.4E-117 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PGJ_RS06640 25ca29ac9a706901f8bc7eb8a0b4837a 281 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 36.951 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PGJ_RS06640 25ca29ac9a706901f8bc7eb8a0b4837a 281 SUPERFAMILY SSF52374 1 278 4.38E-98 T 22-04-2016 PGJ_RS04460 eff456500d95e334afe040d3f4d57e6d 367 PANTHER PTHR35604 203 362 6.9E-31 T 22-04-2016 PGJ_RS04460 eff456500d95e334afe040d3f4d57e6d 367 PANTHER PTHR35604 12 177 6.9E-31 T 22-04-2016 PGJ_RS04460 eff456500d95e334afe040d3f4d57e6d 367 Pfam PF01609 Transposase DDE domain 143 348 3.7E-48 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS04460 eff456500d95e334afe040d3f4d57e6d 367 Pfam PF05598 Transposase domain (DUF772) 59 133 1.2E-22 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS06490 ab302b7f7e4c399639f85354235233a3 153 SUPERFAMILY SSF74982 4 134 8.63E-45 T 22-04-2016 IPR023620 Small protein B PGJ_RS06490 ab302b7f7e4c399639f85354235233a3 153 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site PGJ_RS06490 ab302b7f7e4c399639f85354235233a3 153 Gene3D G3DSA:2.40.280.10 9 129 1.1E-44 T 22-04-2016 IPR023620 Small protein B PGJ_RS06490 ab302b7f7e4c399639f85354235233a3 153 Pfam PF01668 SmpB protein 10 72 1.3E-25 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 PGJ_RS06490 ab302b7f7e4c399639f85354235233a3 153 PANTHER PTHR30308:SF2 1 153 1.6E-66 T 22-04-2016 PGJ_RS06490 ab302b7f7e4c399639f85354235233a3 153 Hamap MF_00023 SsrA-binding protein [smpB]. 1 153 63.193 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 PGJ_RS06490 ab302b7f7e4c399639f85354235233a3 153 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 13 134 4.0E-54 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 PGJ_RS06490 ab302b7f7e4c399639f85354235233a3 153 PANTHER PTHR30308 1 153 1.6E-66 T 22-04-2016 PGJ_RS06490 ab302b7f7e4c399639f85354235233a3 153 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 152 1.4E-56 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 PGJ_RS01930 6e5a079f3f24778beb17c7e2f31136b6 339 PANTHER PTHR22550:SF8 7 337 7.5E-62 T 22-04-2016 PGJ_RS01930 6e5a079f3f24778beb17c7e2f31136b6 339 Pfam PF07584 Aerotolerance regulator N-terminal 1 76 2.9E-8 T 22-04-2016 IPR024163 Aerotolerance regulator, N-terminal PGJ_RS01930 6e5a079f3f24778beb17c7e2f31136b6 339 SUPERFAMILY SSF53300 89 287 1.35E-31 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS01930 6e5a079f3f24778beb17c7e2f31136b6 339 Gene3D G3DSA:3.40.50.410 89 284 2.5E-25 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS01930 6e5a079f3f24778beb17c7e2f31136b6 339 PANTHER PTHR22550 7 337 7.5E-62 T 22-04-2016 PGJ_RS01930 6e5a079f3f24778beb17c7e2f31136b6 339 Pfam PF00092 von Willebrand factor type A domain 94 277 4.0E-22 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS01930 6e5a079f3f24778beb17c7e2f31136b6 339 SMART SM00327 90 283 9.5E-21 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS01745 cd1a24c752942860cd4e70a6cce4bacc 324 PANTHER PTHR11079 30 318 1.4E-27 T 22-04-2016 PGJ_RS01745 cd1a24c752942860cd4e70a6cce4bacc 324 SUPERFAMILY SSF55174 30 106 1.7E-5 T 22-04-2016 PGJ_RS01745 cd1a24c752942860cd4e70a6cce4bacc 324 PANTHER PTHR11079:SF73 30 318 1.4E-27 T 22-04-2016 PGJ_RS01745 cd1a24c752942860cd4e70a6cce4bacc 324 Gene3D G3DSA:3.10.290.10 30 77 6.9E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS01745 cd1a24c752942860cd4e70a6cce4bacc 324 Pfam PF00849 RNA pseudouridylate synthase 97 249 7.5E-15 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS01745 cd1a24c752942860cd4e70a6cce4bacc 324 SUPERFAMILY SSF55120 89 305 1.98E-35 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS02470 4aabe7ad4f270ab27b9c0aec470297d7 175 SUPERFAMILY SSF50346 102 172 1.08E-11 T 22-04-2016 IPR011033 PRC-barrel-like PGJ_RS02470 4aabe7ad4f270ab27b9c0aec470297d7 175 Gene3D G3DSA:2.30.30.240 104 172 6.8E-12 T 22-04-2016 PGJ_RS02470 4aabe7ad4f270ab27b9c0aec470297d7 175 PANTHER PTHR33692 10 173 3.2E-20 T 22-04-2016 PGJ_RS02470 4aabe7ad4f270ab27b9c0aec470297d7 175 Pfam PF05239 PRC-barrel domain 102 171 1.7E-4 T 22-04-2016 IPR027275 PRC-barrel domain PGJ_RS02470 4aabe7ad4f270ab27b9c0aec470297d7 175 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 10 170 1.7E-24 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PGJ_RS02470 4aabe7ad4f270ab27b9c0aec470297d7 175 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 172 19.015 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PGJ_RS02470 4aabe7ad4f270ab27b9c0aec470297d7 175 SUPERFAMILY SSF50447 9 93 6.36E-8 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PGJ_RS02470 4aabe7ad4f270ab27b9c0aec470297d7 175 Pfam PF01782 RimM N-terminal domain 10 92 2.2E-8 T 22-04-2016 IPR002676 RimM protein GO:0006364 PGJ_RS02470 4aabe7ad4f270ab27b9c0aec470297d7 175 Gene3D G3DSA:2.40.30.60 6 93 9.8E-6 T 22-04-2016 IPR002676 RimM protein GO:0006364 PGJ_RS07485 46b37c2d9418e2218b54331986fe7007 477 PANTHER PTHR23150 308 457 8.8E-44 T 22-04-2016 PGJ_RS07485 46b37c2d9418e2218b54331986fe7007 477 PANTHER PTHR23150 35 135 8.8E-44 T 22-04-2016 PGJ_RS07485 46b37c2d9418e2218b54331986fe7007 477 PANTHER PTHR23150 260 292 8.8E-44 T 22-04-2016 PGJ_RS07485 46b37c2d9418e2218b54331986fe7007 477 PANTHER PTHR23150:SF19 35 135 8.8E-44 T 22-04-2016 PGJ_RS07485 46b37c2d9418e2218b54331986fe7007 477 PANTHER PTHR23150:SF19 260 292 8.8E-44 T 22-04-2016 PGJ_RS07485 46b37c2d9418e2218b54331986fe7007 477 Gene3D G3DSA:3.90.1580.10 28 88 1.1E-88 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme PGJ_RS07485 46b37c2d9418e2218b54331986fe7007 477 Gene3D G3DSA:3.90.1580.10 219 459 1.1E-88 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme PGJ_RS07485 46b37c2d9418e2218b54331986fe7007 477 PANTHER PTHR23150:SF19 308 457 8.8E-44 T 22-04-2016 PGJ_RS07485 46b37c2d9418e2218b54331986fe7007 477 Pfam PF03781 Sulfatase-modifying factor enzyme 1 36 457 2.5E-50 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme PGJ_RS07485 46b37c2d9418e2218b54331986fe7007 477 SUPERFAMILY SSF56436 213 458 5.65E-67 T 22-04-2016 IPR016187 C-type lectin fold PGJ_RS07485 46b37c2d9418e2218b54331986fe7007 477 SUPERFAMILY SSF56436 34 86 5.65E-67 T 22-04-2016 IPR016187 C-type lectin fold PGJ_RS08050 1648b6702821e29a51e564b389722595 149 SUPERFAMILY SSF53927 14 142 1.13E-33 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PGJ_RS08050 1648b6702821e29a51e564b389722595 149 Gene3D G3DSA:3.40.140.10 14 141 7.9E-36 T 22-04-2016 PGJ_RS08050 1648b6702821e29a51e564b389722595 149 PANTHER PTHR11086 8 139 5.5E-42 T 22-04-2016 IPR015517 Deoxycytidylate deaminase-related PGJ_RS08050 1648b6702821e29a51e564b389722595 149 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 74 109 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PGJ_RS08050 1648b6702821e29a51e564b389722595 149 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 12 120 1.0E-26 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 PGJ_RS08050 1648b6702821e29a51e564b389722595 149 PIRSF PIRSF006019 3 149 1.9E-45 T 22-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 PGJ_RS07845 7b70692ad66cae68932ce9d6bea81d0c 181 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 175 1.7E-37 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PGJ_RS07845 7b70692ad66cae68932ce9d6bea81d0c 181 SUPERFAMILY SSF53323 1 180 4.58E-47 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PGJ_RS07845 7b70692ad66cae68932ce9d6bea81d0c 181 PANTHER PTHR32154:SF15 1 180 1.8E-77 T 22-04-2016 PGJ_RS07845 7b70692ad66cae68932ce9d6bea81d0c 181 Gene3D G3DSA:3.40.920.10 1 180 3.3E-54 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PGJ_RS07845 7b70692ad66cae68932ce9d6bea81d0c 181 PANTHER PTHR32154 1 180 1.8E-77 T 22-04-2016 PGJ_RS07845 7b70692ad66cae68932ce9d6bea81d0c 181 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 3 178 3.3E-25 T 22-04-2016 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 PGJ_RS00755 4d693fbc884ebe6e230059695991b946 71 SUPERFAMILY SSF141694 2 69 3.14E-22 T 22-04-2016 PGJ_RS00755 4d693fbc884ebe6e230059695991b946 71 Pfam PF08922 Domain of unknown function (DUF1905) 3 68 6.2E-20 T 22-04-2016 IPR015018 Protein of unknown function DUF1905 PGJ_RS00755 4d693fbc884ebe6e230059695991b946 71 Gene3D G3DSA:2.40.30.100 2 69 1.0E-30 T 22-04-2016 PGJ_RS04975 5bf16bf628694f8994a9f7c267b767a2 665 SUPERFAMILY SSF56300 472 488 1.41E-6 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS04975 5bf16bf628694f8994a9f7c267b767a2 665 SUPERFAMILY SSF56300 523 551 1.41E-6 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS04975 5bf16bf628694f8994a9f7c267b767a2 665 SUPERFAMILY SSF56300 400 420 1.41E-6 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS04975 5bf16bf628694f8994a9f7c267b767a2 665 SUPERFAMILY SSF56300 182 268 1.41E-6 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS04975 5bf16bf628694f8994a9f7c267b767a2 665 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 18 656 1.8E-301 T 22-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PGJ_RS04975 5bf16bf628694f8994a9f7c267b767a2 665 PIRSF PIRSF000906 11 659 4.8E-292 T 22-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PGJ_RS04975 5bf16bf628694f8994a9f7c267b767a2 665 Gene3D G3DSA:3.60.21.10 400 445 3.5E-5 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS04975 5bf16bf628694f8994a9f7c267b767a2 665 Gene3D G3DSA:3.60.21.10 198 272 3.5E-5 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS04975 5bf16bf628694f8994a9f7c267b767a2 665 Gene3D G3DSA:3.60.21.10 487 577 3.5E-5 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS04975 5bf16bf628694f8994a9f7c267b767a2 665 Gene3D G3DSA:3.60.21.10 50 73 3.5E-5 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS04975 5bf16bf628694f8994a9f7c267b767a2 665 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 15 658 38.251 T 22-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PGJ_RS01100 0feea3e5cb6c42db881f838fa27e2d80 233 SUPERFAMILY SSF53790 3 220 2.36E-81 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PGJ_RS01100 0feea3e5cb6c42db881f838fa27e2d80 233 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 203 1.0E-30 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PGJ_RS01100 0feea3e5cb6c42db881f838fa27e2d80 233 PANTHER PTHR21091 1 228 2.4E-88 T 22-04-2016 PGJ_RS01100 0feea3e5cb6c42db881f838fa27e2d80 233 Gene3D G3DSA:3.30.950.10 113 223 1.9E-42 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PGJ_RS01100 0feea3e5cb6c42db881f838fa27e2d80 233 PANTHER PTHR21091:SF18 1 228 2.4E-88 T 22-04-2016 PGJ_RS01100 0feea3e5cb6c42db881f838fa27e2d80 233 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 82 93 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS01100 0feea3e5cb6c42db881f838fa27e2d80 233 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5 228 5.7E-74 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS01100 0feea3e5cb6c42db881f838fa27e2d80 233 Gene3D G3DSA:3.40.1010.10 2 112 2.6E-13 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PGJ_RS01100 0feea3e5cb6c42db881f838fa27e2d80 233 PIRSF PIRSF005917 1 233 1.4E-93 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS01100 0feea3e5cb6c42db881f838fa27e2d80 233 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 4 222 36.534 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS08960 9b0f70ec1da867090c9dac5dfac70900 190 Pfam PF04191 Phospholipid methyltransferase 80 176 3.6E-13 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 Gene3D G3DSA:3.10.129.10 276 407 4.0E-40 T 22-04-2016 IPR029069 HotDog domain PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 Pfam PF03061 Thioesterase superfamily 316 390 3.3E-12 T 22-04-2016 IPR006683 Thioesterase domain PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 233 6.2E-51 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 PANTHER PTHR10000:SF16 1 266 5.7E-55 T 22-04-2016 PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 3.1E-48 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 2.9E-45 T 22-04-2016 IPR000150 Cof protein GO:0016787 PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 286 399 1.5E-23 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 SUPERFAMILY SSF56784 1 264 1.72E-57 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 Gene3D G3DSA:3.40.50.1000 179 266 1.7E-46 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 Gene3D G3DSA:3.40.50.1000 1 77 1.7E-46 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 Gene3D G3DSA:3.30.1240.10 100 178 2.8E-10 T 22-04-2016 PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 SUPERFAMILY SSF54637 283 399 1.84E-24 T 22-04-2016 IPR029069 HotDog domain PGJ_RS01515 75e18b0e16bb337c939da09dcf033f24 407 PANTHER PTHR10000 1 266 5.7E-55 T 22-04-2016 PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 327 35.649 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 Gene3D G3DSA:1.10.240.10 202 321 2.4E-30 T 22-04-2016 PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 SUPERFAMILY SSF52374 3 326 3.75E-82 T 22-04-2016 PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 Pfam PF00579 tRNA synthetases class I (W and Y) 3 280 1.2E-67 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 4.5E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 4.5E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 4.5E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 4.5E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 PANTHER PTHR10055 1 327 1.4E-121 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 Gene3D G3DSA:3.40.50.620 3 201 3.1E-79 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 PANTHER PTHR10055:SF10 1 327 1.4E-121 T 22-04-2016 PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 326 6.2E-87 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PGJ_RS09345 8a7f88beb23327811b1919ebf5987245 327 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS06715 56eee774375a36bf245709e87ff408e6 335 Pfam PF16872 Putative phage abortive infection protein 216 301 6.0E-18 T 22-04-2016 IPR031709 Putative phage abortive infection protein PGJ_RS06955 607ee9d68bb3f6878aa0146c4d3ea415 925 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 852 923 4.4E-16 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS06955 607ee9d68bb3f6878aa0146c4d3ea415 925 Pfam PF07675 Cleaved Adhesin Domain 310 464 1.8E-59 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS06955 607ee9d68bb3f6878aa0146c4d3ea415 925 Pfam PF07675 Cleaved Adhesin Domain 577 729 3.0E-53 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS06955 607ee9d68bb3f6878aa0146c4d3ea415 925 Pfam PF07675 Cleaved Adhesin Domain 47 200 3.2E-65 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS02370 9d908a09f1e9f45769e0750bd70683c8 152 TIGRFAM TIGR01201 HU_rel: putative DNA-binding protein 1 145 3.4E-51 T 22-04-2016 IPR005902 Putative DNA-binding protein, HU-related PGJ_RS02370 9d908a09f1e9f45769e0750bd70683c8 152 SUPERFAMILY SSF47729 32 117 7.95E-12 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS02370 9d908a09f1e9f45769e0750bd70683c8 152 Pfam PF00216 Bacterial DNA-binding protein 36 84 2.4E-5 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS02370 9d908a09f1e9f45769e0750bd70683c8 152 Gene3D G3DSA:4.10.520.10 35 116 3.9E-7 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS02940 b5a984427fe1f2f9a37905c83a6d85e4 154 PANTHER PTHR30352 1 151 4.9E-52 T 22-04-2016 PGJ_RS02940 b5a984427fe1f2f9a37905c83a6d85e4 154 SUPERFAMILY SSF102114 21 107 2.49E-9 T 22-04-2016 PGJ_RS02940 b5a984427fe1f2f9a37905c83a6d85e4 154 PANTHER PTHR30352:SF2 1 151 4.9E-52 T 22-04-2016 PGJ_RS02940 b5a984427fe1f2f9a37905c83a6d85e4 154 Gene3D G3DSA:3.20.20.70 24 128 3.2E-8 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS02940 b5a984427fe1f2f9a37905c83a6d85e4 154 Pfam PF04055 Radical SAM superfamily 23 82 6.8E-7 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS02940 b5a984427fe1f2f9a37905c83a6d85e4 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 3 151 9.0E-48 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- PGJ_RS02940 b5a984427fe1f2f9a37905c83a6d85e4 154 PIRSF PIRSF000368 1 154 9.4E-55 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- PGJ_RS02940 b5a984427fe1f2f9a37905c83a6d85e4 154 Pfam PF13353 4Fe-4S single cluster domain 13 149 1.3E-37 T 22-04-2016 PGJ_RS08285 ad4afa739c427aae22e032d4b02d559d 261 Hamap MF_01974 Methionine aminopeptidase [map]. 2 249 39.273 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PGJ_RS08285 ad4afa739c427aae22e032d4b02d559d 261 PANTHER PTHR10804:SF41 1 250 4.2E-113 T 22-04-2016 PGJ_RS08285 ad4afa739c427aae22e032d4b02d559d 261 Pfam PF00557 Metallopeptidase family M24 12 238 1.0E-49 T 22-04-2016 IPR000994 Peptidase M24, structural domain PGJ_RS08285 ad4afa739c427aae22e032d4b02d559d 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 6.6E-95 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PGJ_RS08285 ad4afa739c427aae22e032d4b02d559d 261 SUPERFAMILY SSF55920 1 248 6.02E-81 T 22-04-2016 IPR000994 Peptidase M24, structural domain PGJ_RS08285 ad4afa739c427aae22e032d4b02d559d 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 6.5E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PGJ_RS08285 ad4afa739c427aae22e032d4b02d559d 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 6.5E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PGJ_RS08285 ad4afa739c427aae22e032d4b02d559d 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 6.5E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PGJ_RS08285 ad4afa739c427aae22e032d4b02d559d 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 6.5E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PGJ_RS08285 ad4afa739c427aae22e032d4b02d559d 261 Gene3D G3DSA:3.90.230.10 1 250 8.3E-86 T 22-04-2016 IPR000994 Peptidase M24, structural domain PGJ_RS08285 ad4afa739c427aae22e032d4b02d559d 261 PANTHER PTHR10804 1 250 4.2E-113 T 22-04-2016 PGJ_RS03485 1c7846dfa92ae7bf0fc3302b5c00360b 123 PANTHER PTHR33803:SF1 1 99 3.9E-22 T 22-04-2016 PGJ_RS03485 1c7846dfa92ae7bf0fc3302b5c00360b 123 PANTHER PTHR33803 1 99 3.9E-22 T 22-04-2016 PGJ_RS03485 1c7846dfa92ae7bf0fc3302b5c00360b 123 Pfam PF05598 Transposase domain (DUF772) 23 96 7.3E-20 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS07145 f4c1b82c79afc89cfd204fdfc590b1cc 200 Pfam PF01612 3'-5' exonuclease 23 187 7.2E-25 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PGJ_RS07145 f4c1b82c79afc89cfd204fdfc590b1cc 200 Gene3D G3DSA:3.30.420.10 39 187 1.9E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS07145 f4c1b82c79afc89cfd204fdfc590b1cc 200 SMART SM00474 22 191 9.9E-18 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PGJ_RS07145 f4c1b82c79afc89cfd204fdfc590b1cc 200 SUPERFAMILY SSF53098 14 189 1.19E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS07145 f4c1b82c79afc89cfd204fdfc590b1cc 200 PANTHER PTHR13620 22 190 1.3E-38 T 22-04-2016 PGJ_RS04475 773e0964f950070bd979c9e52f71a45f 433 Pfam PF00860 Permease family 20 394 5.3E-41 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PGJ_RS04475 773e0964f950070bd979c9e52f71a45f 433 PANTHER PTHR11119:SF9 16 422 4.2E-139 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 PGJ_RS04475 773e0964f950070bd979c9e52f71a45f 433 PIRSF PIRSF005353 2 433 3.7E-165 T 22-04-2016 IPR026033 Purine permease PbuG-like PGJ_RS04475 773e0964f950070bd979c9e52f71a45f 433 PANTHER PTHR11119 16 422 4.2E-139 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PGJ_RS02830 07d91d4b4378ffc0ddb8708342012fe3 720 PANTHER PTHR38469:SF1 3 719 2.3E-180 T 22-04-2016 PGJ_RS02830 07d91d4b4378ffc0ddb8708342012fe3 720 PANTHER PTHR38469 3 719 2.3E-180 T 22-04-2016 PGJ_RS02830 07d91d4b4378ffc0ddb8708342012fe3 720 Pfam PF10459 Peptidase S46 21 718 1.1E-257 T 22-04-2016 IPR019500 Peptidase S46 GO:0008239|GO:0070009 PGJ_RS02830 07d91d4b4378ffc0ddb8708342012fe3 720 Gene3D G3DSA:2.40.10.10 631 699 2.3E-13 T 22-04-2016 PGJ_RS02830 07d91d4b4378ffc0ddb8708342012fe3 720 SUPERFAMILY SSF50494 183 292 3.75E-29 T 22-04-2016 IPR009003 Peptidase S1, PA clan PGJ_RS02830 07d91d4b4378ffc0ddb8708342012fe3 720 SUPERFAMILY SSF50494 643 706 3.75E-29 T 22-04-2016 IPR009003 Peptidase S1, PA clan PGJ_RS02830 07d91d4b4378ffc0ddb8708342012fe3 720 SUPERFAMILY SSF50494 1 99 3.75E-29 T 22-04-2016 IPR009003 Peptidase S1, PA clan PGJ_RS07150 d3341cdbf883eddc8c4049234d30ddd5 401 SUPERFAMILY SSF88697 5 71 9.94E-12 T 22-04-2016 IPR015947 PUA-like domain PGJ_RS07150 d3341cdbf883eddc8c4049234d30ddd5 401 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 178 356 2.7E-19 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PGJ_RS07150 d3341cdbf883eddc8c4049234d30ddd5 401 Gene3D G3DSA:2.30.130.10 5 70 7.2E-19 T 22-04-2016 IPR015947 PUA-like domain PGJ_RS07150 d3341cdbf883eddc8c4049234d30ddd5 401 PANTHER PTHR11061 4 400 2.0E-99 T 22-04-2016 PGJ_RS07150 d3341cdbf883eddc8c4049234d30ddd5 401 SMART SM00359 5 89 2.1E-4 T 22-04-2016 IPR002478 PUA domain GO:0003723 PGJ_RS07150 d3341cdbf883eddc8c4049234d30ddd5 401 Gene3D G3DSA:3.30.750.80 75 187 9.4E-31 T 22-04-2016 PGJ_RS07150 d3341cdbf883eddc8c4049234d30ddd5 401 PANTHER PTHR11061:SF12 4 400 2.0E-99 T 22-04-2016 PGJ_RS07150 d3341cdbf883eddc8c4049234d30ddd5 401 Gene3D G3DSA:3.40.50.150 192 400 1.8E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS07150 d3341cdbf883eddc8c4049234d30ddd5 401 SUPERFAMILY SSF53335 89 398 1.22E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS07405 20d0f54d766eb901332da7443435981f 225 PIRSF PIRSF006091 1 204 1.2E-34 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PGJ_RS07405 20d0f54d766eb901332da7443435981f 225 SMART SM00900 97 192 7.0E-18 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PGJ_RS07405 20d0f54d766eb901332da7443435981f 225 PANTHER PTHR36118 4 211 8.4E-40 T 22-04-2016 PGJ_RS07405 20d0f54d766eb901332da7443435981f 225 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 5 194 21.41 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PGJ_RS07405 20d0f54d766eb901332da7443435981f 225 PANTHER PTHR36118:SF1 4 211 8.4E-40 T 22-04-2016 PGJ_RS07405 20d0f54d766eb901332da7443435981f 225 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 13 193 3.6E-57 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PGJ_RS07405 20d0f54d766eb901332da7443435981f 225 Pfam PF04205 FMN-binding domain 97 189 1.0E-21 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PGJ_RS06940 6c9418611633a333bd43cedc2434a5fe 626 Gene3D G3DSA:2.60.450.10 51 150 1.8E-11 T 22-04-2016 PGJ_RS06940 6c9418611633a333bd43cedc2434a5fe 626 Gene3D G3DSA:2.60.450.10 168 277 6.5E-10 T 22-04-2016 PGJ_RS06940 6c9418611633a333bd43cedc2434a5fe 626 Gene3D G3DSA:2.60.450.10 337 398 2.2E-7 T 22-04-2016 PGJ_RS06940 6c9418611633a333bd43cedc2434a5fe 626 Pfam PF13100 OstA-like protein 44 201 2.7E-70 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal PGJ_RS09545 fb4d4a38c4bdd882b70974b79218317e 147 Pfam PF14902 Domain of unknown function (DUF4494) 4 143 4.2E-52 T 22-04-2016 IPR027848 Protein of unknown function DUF4494 PGJ_RS06695 3488dfcf46455a2a0628add36fd4e472 166 PANTHER PTHR33202 1 153 5.4E-18 T 22-04-2016 PGJ_RS06695 3488dfcf46455a2a0628add36fd4e472 166 Gene3D G3DSA:1.10.10.10 12 88 1.9E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06695 3488dfcf46455a2a0628add36fd4e472 166 Pfam PF01475 Ferric uptake regulator family 19 117 6.9E-15 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PGJ_RS06695 3488dfcf46455a2a0628add36fd4e472 166 SUPERFAMILY SSF46785 13 144 1.27E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS09900 9a70b593df239741fdd3bf68cf213fa8 1907 Pfam PF01835 MG2 domain 537 623 1.8E-13 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 PGJ_RS09900 9a70b593df239741fdd3bf68cf213fa8 1907 SUPERFAMILY SSF48239 1436 1570 1.19E-7 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PGJ_RS09900 9a70b593df239741fdd3bf68cf213fa8 1907 SUPERFAMILY SSF48239 1606 1681 1.19E-7 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PGJ_RS09900 9a70b593df239741fdd3bf68cf213fa8 1907 SMART SM01360 1145 1235 1.0E-26 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 PGJ_RS09900 9a70b593df239741fdd3bf68cf213fa8 1907 Gene3D G3DSA:1.50.10.20 1582 1665 2.8E-4 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PGJ_RS09900 9a70b593df239741fdd3bf68cf213fa8 1907 Gene3D G3DSA:1.50.10.20 1445 1539 2.8E-4 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PGJ_RS09900 9a70b593df239741fdd3bf68cf213fa8 1907 Pfam PF00207 Alpha-2-macroglobulin family 1145 1234 6.5E-21 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 PGJ_RS09900 9a70b593df239741fdd3bf68cf213fa8 1907 PANTHER PTHR11412 1887 1904 5.2E-34 T 22-04-2016 PGJ_RS09900 9a70b593df239741fdd3bf68cf213fa8 1907 PANTHER PTHR11412 537 1312 5.2E-34 T 22-04-2016 PGJ_RS09900 9a70b593df239741fdd3bf68cf213fa8 1907 PANTHER PTHR11412:SF80 1887 1904 5.2E-34 T 22-04-2016 PGJ_RS09900 9a70b593df239741fdd3bf68cf213fa8 1907 PANTHER PTHR11412:SF80 537 1312 5.2E-34 T 22-04-2016 PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 Pfam PF00919 Uncharacterized protein family UPF0004 19 120 3.9E-30 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 PANTHER PTHR11918:SF43 16 464 1.1E-213 T 22-04-2016 PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 Gene3D G3DSA:2.40.50.140 399 459 5.1E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 19 454 8.9E-136 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 Pfam PF01938 TRAM domain 396 457 5.1E-14 T 22-04-2016 IPR002792 TRAM domain PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 PANTHER PTHR11918 16 464 1.1E-213 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 18 458 67.428 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 Gene3D G3DSA:3.80.30.20 163 396 4.0E-82 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 SUPERFAMILY SSF102114 164 390 1.96E-57 T 22-04-2016 PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 168 188 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 19 457 4.7E-150 T 22-04-2016 PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 Pfam PF04055 Radical SAM superfamily 168 340 2.7E-32 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PGJ_RS04170 7bebc3fe83040597180b584d49007244 465 SMART SM00729 164 384 6.5E-51 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PGJ_RS09325 741e670e1379bcfd61e6a5be72dcf960 433 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 426 47.755 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 PGJ_RS09325 741e670e1379bcfd61e6a5be72dcf960 433 Gene3D G3DSA:3.40.640.10 63 329 7.5E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS09325 741e670e1379bcfd61e6a5be72dcf960 433 PANTHER PTHR11986 1 431 3.1E-201 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PGJ_RS09325 741e670e1379bcfd61e6a5be72dcf960 433 Gene3D G3DSA:3.90.1150.10 334 423 2.8E-57 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS09325 741e670e1379bcfd61e6a5be72dcf960 433 Gene3D G3DSA:3.90.1150.10 4 62 2.8E-57 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS09325 741e670e1379bcfd61e6a5be72dcf960 433 Pfam PF00202 Aminotransferase class-III 28 421 2.8E-122 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PGJ_RS09325 741e670e1379bcfd61e6a5be72dcf960 433 PANTHER PTHR11986:SF8 1 431 3.1E-201 T 22-04-2016 PGJ_RS09325 741e670e1379bcfd61e6a5be72dcf960 433 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 421 1.2E-170 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 PGJ_RS09325 741e670e1379bcfd61e6a5be72dcf960 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 244 281 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PGJ_RS09325 741e670e1379bcfd61e6a5be72dcf960 433 SUPERFAMILY SSF53383 6 424 7.32E-125 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS09245 4ec68ca5d1a635f338b237da0f097b7e 351 Pfam PF16125 Domain of unknown function (DUF4837) 36 328 2.0E-88 T 22-04-2016 IPR032286 Protein of unknown function DUF4837 PGJ_RS02140 7717efb201123053d874cbb2bfdbb965 256 Pfam PF03883 Protein of unknown function (DUF328) 1 244 7.1E-61 T 22-04-2016 IPR005583 Peroxide stress protein YaaA PGJ_RS02140 7717efb201123053d874cbb2bfdbb965 256 PANTHER PTHR30283 2 256 2.2E-59 T 22-04-2016 PGJ_RS02140 7717efb201123053d874cbb2bfdbb965 256 PANTHER PTHR30283:SF3 2 256 2.2E-59 T 22-04-2016 PGJ_RS02140 7717efb201123053d874cbb2bfdbb965 256 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 256 24.934 T 22-04-2016 IPR005583 Peroxide stress protein YaaA PGJ_RS06380 ac387b025fc87d907ff0a4b6afc24fdd 627 PRINTS PR00701 60kDa inner membrane protein signature 259 274 8.9E-8 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PGJ_RS06380 ac387b025fc87d907ff0a4b6afc24fdd 627 PRINTS PR00701 60kDa inner membrane protein signature 94 115 8.9E-8 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PGJ_RS06380 ac387b025fc87d907ff0a4b6afc24fdd 627 PRINTS PR00701 60kDa inner membrane protein signature 441 464 8.9E-8 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PGJ_RS06380 ac387b025fc87d907ff0a4b6afc24fdd 627 Pfam PF14849 YidC periplasmic domain 89 362 2.4E-31 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal PGJ_RS06380 ac387b025fc87d907ff0a4b6afc24fdd 627 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 2 341 5.9E-22 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal PGJ_RS06380 ac387b025fc87d907ff0a4b6afc24fdd 627 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 3 587 15.279 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 PGJ_RS06380 ac387b025fc87d907ff0a4b6afc24fdd 627 Pfam PF02096 60Kd inner membrane protein 376 577 6.0E-42 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PGJ_RS06380 ac387b025fc87d907ff0a4b6afc24fdd 627 PANTHER PTHR12428 368 488 2.5E-46 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PGJ_RS06380 ac387b025fc87d907ff0a4b6afc24fdd 627 PANTHER PTHR12428 507 626 2.5E-46 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PGJ_RS06380 ac387b025fc87d907ff0a4b6afc24fdd 627 PANTHER PTHR12428:SF14 368 488 2.5E-46 T 22-04-2016 PGJ_RS06380 ac387b025fc87d907ff0a4b6afc24fdd 627 PANTHER PTHR12428:SF14 507 626 2.5E-46 T 22-04-2016 PGJ_RS06380 ac387b025fc87d907ff0a4b6afc24fdd 627 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 375 577 5.0E-48 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal PGJ_RS06580 c5d93528bef60ef7efcbf108582cd5d7 710 SUPERFAMILY SSF50494 634 701 5.37E-26 T 22-04-2016 IPR009003 Peptidase S1, PA clan PGJ_RS06580 c5d93528bef60ef7efcbf108582cd5d7 710 SUPERFAMILY SSF50494 179 288 5.37E-26 T 22-04-2016 IPR009003 Peptidase S1, PA clan PGJ_RS06580 c5d93528bef60ef7efcbf108582cd5d7 710 SUPERFAMILY SSF50494 51 101 5.37E-26 T 22-04-2016 IPR009003 Peptidase S1, PA clan PGJ_RS06580 c5d93528bef60ef7efcbf108582cd5d7 710 PANTHER PTHR38469:SF1 4 710 1.2E-176 T 22-04-2016 PGJ_RS06580 c5d93528bef60ef7efcbf108582cd5d7 710 Gene3D G3DSA:2.40.10.10 618 691 1.9E-14 T 22-04-2016 PGJ_RS06580 c5d93528bef60ef7efcbf108582cd5d7 710 Pfam PF10459 Peptidase S46 22 708 1.6E-255 T 22-04-2016 IPR019500 Peptidase S46 GO:0008239|GO:0070009 PGJ_RS06580 c5d93528bef60ef7efcbf108582cd5d7 710 PANTHER PTHR38469 4 710 1.2E-176 T 22-04-2016 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 Gene3D G3DSA:1.10.1750.10 373 472 1.9E-31 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 SUPERFAMILY SSF52540 137 346 5.08E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 9 472 25.642 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 ProSitePatterns PS01008 DnaA protein signature. 431 450 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 12 469 1.3E-136 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 PANTHER PTHR30050:SF2 135 473 6.7E-142 T 22-04-2016 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 PANTHER PTHR30050:SF2 7 108 6.7E-142 T 22-04-2016 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 SMART SM00760 381 450 6.1E-34 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 SUPERFAMILY SSF48295 369 471 6.8E-28 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 Gene3D G3DSA:1.10.8.60 304 372 7.1E-19 T 22-04-2016 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 Pfam PF11638 DnaA N-terminal domain 9 69 1.7E-12 T 22-04-2016 IPR024633 DnaA N-terminal domain PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 431 450 5.1E-35 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 171 191 5.1E-35 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 269 296 5.1E-35 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 235 249 5.1E-35 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 203 217 5.1E-35 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 Gene3D G3DSA:3.40.50.300 128 301 2.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 382 448 3.4E-25 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 Pfam PF00308 Bacterial dnaA protein 137 350 4.6E-63 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 PANTHER PTHR30050 135 473 6.7E-142 T 22-04-2016 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 PANTHER PTHR30050 7 108 6.7E-142 T 22-04-2016 PGJ_RS00005 c87bacd1c80b6a1442e81ad6f66840c4 473 SMART SM00382 170 374 2.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS09850 10e25d7ca91add83640fe4b52b7c03d0 337 SUPERFAMILY SSF54106 292 336 2.09E-9 T 22-04-2016 IPR018392 LysM domain PGJ_RS09850 10e25d7ca91add83640fe4b52b7c03d0 337 Gene3D G3DSA:3.10.350.10 291 336 2.0E-15 T 22-04-2016 IPR018392 LysM domain PGJ_RS09850 10e25d7ca91add83640fe4b52b7c03d0 337 Pfam PF01551 Peptidase family M23 147 242 8.7E-30 T 22-04-2016 IPR016047 Peptidase M23 PGJ_RS09850 10e25d7ca91add83640fe4b52b7c03d0 337 PANTHER PTHR21666 125 322 2.0E-49 T 22-04-2016 PGJ_RS09850 10e25d7ca91add83640fe4b52b7c03d0 337 SUPERFAMILY SSF51261 75 245 1.1E-48 T 22-04-2016 IPR011055 Duplicated hybrid motif PGJ_RS09850 10e25d7ca91add83640fe4b52b7c03d0 337 Gene3D G3DSA:2.70.70.10 118 247 3.4E-43 T 22-04-2016 PGJ_RS09850 10e25d7ca91add83640fe4b52b7c03d0 337 SMART SM00257 293 337 4.6E-11 T 22-04-2016 IPR018392 LysM domain PGJ_RS09850 10e25d7ca91add83640fe4b52b7c03d0 337 Pfam PF01476 LysM domain 294 336 1.5E-10 T 22-04-2016 IPR018392 LysM domain PGJ_RS02665 02a5a6a8ed5eaf9cc59ebd39e908e0d9 555 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 555 44.076 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 PGJ_RS02665 02a5a6a8ed5eaf9cc59ebd39e908e0d9 555 PANTHER PTHR10025 1 554 3.1E-271 T 22-04-2016 PGJ_RS02665 02a5a6a8ed5eaf9cc59ebd39e908e0d9 555 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 102 112 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 PGJ_RS02665 02a5a6a8ed5eaf9cc59ebd39e908e0d9 555 Pfam PF01268 Formate--tetrahydrofolate ligase 2 554 2.4E-244 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 PGJ_RS02665 02a5a6a8ed5eaf9cc59ebd39e908e0d9 555 Gene3D G3DSA:3.40.50.300 247 439 1.3E-137 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02665 02a5a6a8ed5eaf9cc59ebd39e908e0d9 555 Gene3D G3DSA:3.40.50.300 13 127 1.3E-137 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02665 02a5a6a8ed5eaf9cc59ebd39e908e0d9 555 Gene3D G3DSA:3.30.1510.10 128 246 6.9E-44 T 22-04-2016 PGJ_RS02665 02a5a6a8ed5eaf9cc59ebd39e908e0d9 555 SUPERFAMILY SSF52540 4 548 2.8E-217 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02665 02a5a6a8ed5eaf9cc59ebd39e908e0d9 555 Gene3D G3DSA:3.10.410.10 443 532 1.3E-31 T 22-04-2016 PGJ_RS02665 02a5a6a8ed5eaf9cc59ebd39e908e0d9 555 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 327 338 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 PGJ_RS01775 e9b79f4dfb7287ea42f0b6050c21cc34 230 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 6 228 6.3E-90 T 22-04-2016 IPR011138 Succinate dehydrogenase cytochrome b558 subunit UniPathway: UPA00223 PGJ_RS01775 e9b79f4dfb7287ea42f0b6050c21cc34 230 Gene3D G3DSA:1.20.950.10 12 219 3.7E-17 T 22-04-2016 PGJ_RS01775 e9b79f4dfb7287ea42f0b6050c21cc34 230 SUPERFAMILY SSF81343 1 219 3.16E-42 T 22-04-2016 PGJ_RS06535 47fc37f7cf7d56d06dff51d5e2cd6516 90 SUPERFAMILY SSF46955 38 85 3.85E-10 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS06535 47fc37f7cf7d56d06dff51d5e2cd6516 90 PANTHER PTHR34585 1 85 8.3E-18 T 22-04-2016 PGJ_RS06535 47fc37f7cf7d56d06dff51d5e2cd6516 90 Gene3D G3DSA:1.10.10.10 39 87 6.6E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06535 47fc37f7cf7d56d06dff51d5e2cd6516 90 Pfam PF12728 Helix-turn-helix domain 43 86 2.4E-9 T 22-04-2016 PGJ_RS06890 0e6087f6662da081aa74c82579875f15 219 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 56 181 1.6E-14 T 22-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family PGJ_RS06890 0e6087f6662da081aa74c82579875f15 219 Gene3D G3DSA:2.30.30.330 55 192 2.9E-19 T 22-04-2016 PGJ_RS06890 0e6087f6662da081aa74c82579875f15 219 SUPERFAMILY SSF54001 55 185 1.47E-18 T 22-04-2016 PGJ_RS06300 7850f5b329c758fed689e3e2c853edf9 353 Gene3D G3DSA:2.40.50.100 160 191 4.4E-15 T 22-04-2016 PGJ_RS06300 7850f5b329c758fed689e3e2c853edf9 353 Gene3D G3DSA:2.40.50.100 75 106 4.4E-15 T 22-04-2016 PGJ_RS06300 7850f5b329c758fed689e3e2c853edf9 353 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 266 1.8E-34 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PGJ_RS06300 7850f5b329c758fed689e3e2c853edf9 353 SUPERFAMILY SSF111369 63 273 4.45E-31 T 22-04-2016 PGJ_RS06300 7850f5b329c758fed689e3e2c853edf9 353 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 347 7.1E-67 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PGJ_RS06300 7850f5b329c758fed689e3e2c853edf9 353 PANTHER PTHR30469 1 349 5.4E-69 T 22-04-2016 PGJ_RS06530 62f56e0e3d369ee2c95d830cd47387fa 98 Pfam PF12728 Helix-turn-helix domain 43 92 1.2E-10 T 22-04-2016 PGJ_RS06530 62f56e0e3d369ee2c95d830cd47387fa 98 Gene3D G3DSA:1.10.10.10 43 91 2.7E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06530 62f56e0e3d369ee2c95d830cd47387fa 98 SUPERFAMILY SSF46955 43 93 6.41E-12 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS06530 62f56e0e3d369ee2c95d830cd47387fa 98 PANTHER PTHR34585 3 96 2.5E-30 T 22-04-2016 PGJ_RS00975 15922dfce459f3c641a305d259fa7fb3 166 SUPERFAMILY SSF88946 4 92 3.92E-15 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS00975 15922dfce459f3c641a305d259fa7fb3 166 Gene3D G3DSA:1.10.1740.10 4 77 2.5E-14 T 22-04-2016 PGJ_RS00975 15922dfce459f3c641a305d259fa7fb3 166 PANTHER PTHR30173 4 161 1.7E-32 T 22-04-2016 PGJ_RS00975 15922dfce459f3c641a305d259fa7fb3 166 SUPERFAMILY SSF88659 82 160 5.79E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS00975 15922dfce459f3c641a305d259fa7fb3 166 Pfam PF04542 Sigma-70 region 2 11 76 1.8E-11 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS00975 15922dfce459f3c641a305d259fa7fb3 166 Pfam PF08281 Sigma-70, region 4 105 156 2.4E-12 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS00975 15922dfce459f3c641a305d259fa7fb3 166 Gene3D G3DSA:1.10.10.10 97 160 3.2E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS00975 15922dfce459f3c641a305d259fa7fb3 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 160 1.6E-22 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 Pfam PF13291 ACT domain 669 745 1.2E-15 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 Gene3D G3DSA:3.10.20.30 409 470 6.6E-19 T 22-04-2016 IPR012675 Beta-grasp domain PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 PANTHER PTHR21262 99 746 1.5E-208 T 22-04-2016 PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 SUPERFAMILY SSF81271 400 470 4.58E-19 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 Pfam PF02824 TGS domain 410 469 5.7E-19 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 Gene3D G3DSA:3.30.460.10 193 347 2.3E-38 T 22-04-2016 PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 PANTHER PTHR21262:SF0 99 746 1.5E-208 T 22-04-2016 PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 Pfam PF13328 HD domain 53 191 3.9E-18 T 22-04-2016 IPR003607 HD/PDEase domain PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 Pfam PF04607 Region found in RelA / SpoT proteins 253 366 4.4E-32 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 SMART SM00954 253 368 2.6E-49 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 SUPERFAMILY SSF109604 52 206 1.63E-28 T 22-04-2016 PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 Gene3D G3DSA:3.30.70.260 670 743 1.4E-7 T 22-04-2016 PGJ_RS01500 33170ddeb31a82bf36bd9298c8075d5f 746 SUPERFAMILY SSF81301 197 414 2.29E-47 T 22-04-2016 PGJ_RS09500 2991e1bcf56103d36aa81f2e0fdfad0a 342 Pfam PF13808 DDE_Tnp_1-associated 1 63 9.1E-10 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal PGJ_RS09500 2991e1bcf56103d36aa81f2e0fdfad0a 342 PANTHER PTHR30298 1 315 1.7E-53 T 22-04-2016 PGJ_RS09500 2991e1bcf56103d36aa81f2e0fdfad0a 342 Pfam PF01609 Transposase DDE domain 72 310 5.7E-14 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS02700 2991e1bcf56103d36aa81f2e0fdfad0a 342 Pfam PF13808 DDE_Tnp_1-associated 1 63 9.1E-10 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal PGJ_RS02700 2991e1bcf56103d36aa81f2e0fdfad0a 342 PANTHER PTHR30298 1 315 1.7E-53 T 22-04-2016 PGJ_RS02700 2991e1bcf56103d36aa81f2e0fdfad0a 342 Pfam PF01609 Transposase DDE domain 72 310 5.7E-14 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS03065 2991e1bcf56103d36aa81f2e0fdfad0a 342 Pfam PF13808 DDE_Tnp_1-associated 1 63 9.1E-10 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal PGJ_RS03065 2991e1bcf56103d36aa81f2e0fdfad0a 342 PANTHER PTHR30298 1 315 1.7E-53 T 22-04-2016 PGJ_RS03065 2991e1bcf56103d36aa81f2e0fdfad0a 342 Pfam PF01609 Transposase DDE domain 72 310 5.7E-14 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS05120 6bc183990d3c908a4d3a79201ea71b6b 695 Pfam PF01432 Peptidase family M3 246 691 1.2E-118 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 PGJ_RS05120 6bc183990d3c908a4d3a79201ea71b6b 695 Gene3D G3DSA:3.40.390.10 378 516 1.8E-51 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PGJ_RS05120 6bc183990d3c908a4d3a79201ea71b6b 695 Gene3D G3DSA:1.20.1050.40 30 157 4.5E-23 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal PGJ_RS05120 6bc183990d3c908a4d3a79201ea71b6b 695 Gene3D G3DSA:1.10.1370.10 158 364 5.9E-100 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PGJ_RS05120 6bc183990d3c908a4d3a79201ea71b6b 695 Gene3D G3DSA:1.10.1370.10 517 694 5.9E-100 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PGJ_RS05120 6bc183990d3c908a4d3a79201ea71b6b 695 SUPERFAMILY SSF55486 18 694 3.26E-171 T 22-04-2016 PGJ_RS05120 6bc183990d3c908a4d3a79201ea71b6b 695 PANTHER PTHR11804 15 695 0.0 T 22-04-2016 PGJ_RS05120 6bc183990d3c908a4d3a79201ea71b6b 695 PANTHER PTHR11804:SF47 15 695 0.0 T 22-04-2016 PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 Pfam PF09382 RQC domain 403 511 3.2E-23 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 Gene3D G3DSA:3.40.50.300 201 340 9.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 Gene3D G3DSA:1.10.10.10 341 514 2.4E-48 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 SUPERFAMILY SSF47819 529 610 3.05E-21 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 Pfam PF00271 Helicase conserved C-terminal domain 224 327 2.9E-18 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 600 2.3E-199 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 SMART SM00487 14 213 2.2E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 Pfam PF00270 DEAD/DEAH box helicase 22 183 1.2E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 Gene3D G3DSA:3.40.50.300 5 200 5.0E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 SUPERFAMILY SSF52540 58 347 4.14E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 PANTHER PTHR13710 5 725 6.6E-249 T 22-04-2016 PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 Pfam PF16124 RecQ zinc-binding 339 399 3.9E-15 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 460 1.1E-148 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 SUPERFAMILY SSF46785 398 508 2.72E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 SMART SM00341 528 608 1.3E-9 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 SMART SM00956 407 510 8.2E-26 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 Pfam PF00570 HRDC domain 534 598 5.9E-16 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 SMART SM00490 246 327 4.4E-27 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 Gene3D G3DSA:1.10.150.80 533 605 3.3E-16 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PGJ_RS06930 f86dd8e01379fd8418a2d8a7983f2e07 725 PANTHER PTHR13710:SF81 5 725 6.6E-249 T 22-04-2016 PGJ_RS01285 dc7cf1d45f27db692f49cc6dbf0d711e 141 PANTHER PTHR21272 1 141 1.5E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PGJ_RS01285 dc7cf1d45f27db692f49cc6dbf0d711e 141 Gene3D G3DSA:3.40.50.9100 4 140 2.0E-52 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PGJ_RS01285 dc7cf1d45f27db692f49cc6dbf0d711e 141 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 141 3.0E-72 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PGJ_RS01285 dc7cf1d45f27db692f49cc6dbf0d711e 141 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PGJ_RS01285 dc7cf1d45f27db692f49cc6dbf0d711e 141 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 141 54.76 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PGJ_RS01285 dc7cf1d45f27db692f49cc6dbf0d711e 141 SUPERFAMILY SSF52304 4 139 6.41E-51 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PGJ_RS01285 dc7cf1d45f27db692f49cc6dbf0d711e 141 Pfam PF01220 Dehydroquinase class II 4 138 3.8E-50 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PGJ_RS01285 dc7cf1d45f27db692f49cc6dbf0d711e 141 PIRSF PIRSF001399 1 141 8.8E-54 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PGJ_RS04070 37b8bf33d75b8329ccff7b2dd2fb9912 317 PANTHER PTHR10846 2 315 5.3E-55 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 PGJ_RS04070 37b8bf33d75b8329ccff7b2dd2fb9912 317 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 309 8.5E-68 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 PGJ_RS04070 37b8bf33d75b8329ccff7b2dd2fb9912 317 Pfam PF01699 Sodium/calcium exchanger protein 5 151 5.4E-33 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 PGJ_RS04070 37b8bf33d75b8329ccff7b2dd2fb9912 317 Pfam PF01699 Sodium/calcium exchanger protein 172 314 3.1E-29 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 PGJ_RS06360 2c09692c2b349be59b1fc4aeb79cf074 647 TIGRFAM TIGR00552 nadE: NAD+ synthetase 341 506 1.9E-23 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 PGJ_RS06360 2c09692c2b349be59b1fc4aeb79cf074 647 PANTHER PTHR23090:SF9 3 641 3.3E-170 T 22-04-2016 PGJ_RS06360 2c09692c2b349be59b1fc4aeb79cf074 647 SUPERFAMILY SSF52402 326 616 4.41E-70 T 22-04-2016 PGJ_RS06360 2c09692c2b349be59b1fc4aeb79cf074 647 PIRSF PIRSF006630 3 637 2.0E-144 T 22-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 PGJ_RS06360 2c09692c2b349be59b1fc4aeb79cf074 647 PANTHER PTHR23090 3 641 3.3E-170 T 22-04-2016 PGJ_RS06360 2c09692c2b349be59b1fc4aeb79cf074 647 SUPERFAMILY SSF56317 4 283 1.31E-50 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PGJ_RS06360 2c09692c2b349be59b1fc4aeb79cf074 647 Pfam PF02540 NAD synthase 338 506 1.2E-29 T 22-04-2016 IPR022310 NAD/GMP synthase PGJ_RS06360 2c09692c2b349be59b1fc4aeb79cf074 647 Gene3D G3DSA:3.60.110.10 5 281 1.7E-53 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PGJ_RS06360 2c09692c2b349be59b1fc4aeb79cf074 647 Gene3D G3DSA:3.40.50.620 324 616 1.0E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS06360 2c09692c2b349be59b1fc4aeb79cf074 647 Pfam PF00795 Carbon-nitrogen hydrolase 16 272 2.3E-19 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PGJ_RS06600 e819bbcd49c1223a135392e9e99004c5 170 PANTHER PTHR10815:SF5 1 165 4.5E-58 T 22-04-2016 PGJ_RS06600 e819bbcd49c1223a135392e9e99004c5 170 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 86 165 3.6E-36 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PGJ_RS06600 e819bbcd49c1223a135392e9e99004c5 170 SUPERFAMILY SSF53155 6 90 9.61E-14 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 PGJ_RS06600 e819bbcd49c1223a135392e9e99004c5 170 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 136 142 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 PGJ_RS06600 e819bbcd49c1223a135392e9e99004c5 170 SUPERFAMILY SSF46767 85 165 7.06E-31 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PGJ_RS06600 e819bbcd49c1223a135392e9e99004c5 170 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 87 165 1.5E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PGJ_RS06600 e819bbcd49c1223a135392e9e99004c5 170 Gene3D G3DSA:1.10.10.10 85 166 3.8E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06600 e819bbcd49c1223a135392e9e99004c5 170 PANTHER PTHR10815 1 165 4.5E-58 T 22-04-2016 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 195 208 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 402 419 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 PRINTS PR00662 Glucose-6-phosphate isomerase signature 388 402 2.0E-29 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 PRINTS PR00662 Glucose-6-phosphate isomerase signature 370 388 2.0E-29 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 PRINTS PR00662 Glucose-6-phosphate isomerase signature 191 209 2.0E-29 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 PRINTS PR00662 Glucose-6-phosphate isomerase signature 71 90 2.0E-29 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 PRINTS PR00662 Glucose-6-phosphate isomerase signature 267 288 2.0E-29 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 PRINTS PR00662 Glucose-6-phosphate isomerase signature 402 415 2.0E-29 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 Pfam PF00342 Phosphoglucose isomerase 70 419 1.7E-24 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 PANTHER PTHR11469 51 437 6.8E-135 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 Gene3D G3DSA:3.40.50.10490 193 411 7.9E-89 T 22-04-2016 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 Gene3D G3DSA:3.40.50.10490 63 192 1.4E-26 T 22-04-2016 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 SUPERFAMILY SSF53697 16 438 1.37E-125 T 22-04-2016 PGJ_RS02455 ac6c26119c7b2b9befeebfeb9e625593 445 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 429 24.589 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PGJ_RS05025 08f48c60f5bb4730b806cb1fecce3888 267 PIRSF PIRSF005902 1 259 2.6E-68 T 22-04-2016 IPR001130 TatD family GO:0016788 PGJ_RS05025 08f48c60f5bb4730b806cb1fecce3888 267 PANTHER PTHR10060:SF21 1 258 1.8E-91 T 22-04-2016 PGJ_RS05025 08f48c60f5bb4730b806cb1fecce3888 267 Gene3D G3DSA:3.20.20.140 2 256 3.1E-74 T 22-04-2016 PGJ_RS05025 08f48c60f5bb4730b806cb1fecce3888 267 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 255 2.4E-65 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 PGJ_RS05025 08f48c60f5bb4730b806cb1fecce3888 267 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PGJ_RS05025 08f48c60f5bb4730b806cb1fecce3888 267 Pfam PF01026 TatD related DNase 4 254 2.8E-60 T 22-04-2016 IPR001130 TatD family GO:0016788 PGJ_RS05025 08f48c60f5bb4730b806cb1fecce3888 267 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PGJ_RS05025 08f48c60f5bb4730b806cb1fecce3888 267 SUPERFAMILY SSF51556 3 256 1.34E-74 T 22-04-2016 IPR032466 Metal-dependent hydrolase PGJ_RS05025 08f48c60f5bb4730b806cb1fecce3888 267 PANTHER PTHR10060 1 258 1.8E-91 T 22-04-2016 IPR001130 TatD family GO:0016788 PGJ_RS07460 8e133110a762a816c61b30f2a560b3a3 197 Pfam PF02417 Chromate transporter 4 191 3.0E-52 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 PGJ_RS07460 8e133110a762a816c61b30f2a560b3a3 197 PANTHER PTHR33567 2 136 6.8E-61 T 22-04-2016 PGJ_RS07460 8e133110a762a816c61b30f2a560b3a3 197 PANTHER PTHR33567 155 197 6.8E-61 T 22-04-2016 PGJ_RS04595 d912fc50ea679c90a3d58b75ee9631e5 433 PIRSF PIRSF006054 2 433 2.1E-159 T 22-04-2016 IPR021144 Uncharacterised protein family UPF0597 PGJ_RS04595 d912fc50ea679c90a3d58b75ee9631e5 433 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 5 431 34.851 T 22-04-2016 IPR021144 Uncharacterised protein family UPF0597 PGJ_RS04595 d912fc50ea679c90a3d58b75ee9631e5 433 Pfam PF03313 Serine dehydratase alpha chain 169 426 1.8E-52 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit PGJ_RS04595 d912fc50ea679c90a3d58b75ee9631e5 433 PANTHER PTHR30501:SF2 1 433 8.0E-115 T 22-04-2016 PGJ_RS04595 d912fc50ea679c90a3d58b75ee9631e5 433 PANTHER PTHR30501 1 433 8.0E-115 T 22-04-2016 PGJ_RS00580 8f0e7a246394d2e91302d0552a6bd688 411 PANTHER PTHR10151 1 408 3.0E-136 T 22-04-2016 IPR024873 Ectonucleotide pyrophosphatase/phosphodiesterase family PGJ_RS00580 8f0e7a246394d2e91302d0552a6bd688 411 Gene3D G3DSA:3.40.720.10 10 317 1.4E-78 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PGJ_RS00580 8f0e7a246394d2e91302d0552a6bd688 411 SUPERFAMILY SSF53649 32 389 6.25E-93 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PGJ_RS00580 8f0e7a246394d2e91302d0552a6bd688 411 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 37 349 6.8E-79 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 PGJ_RS09575 83d6cb67a66a24740b178005cc180f26 303 Pfam PF08842 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 29 299 1.4E-32 T 22-04-2016 IPR014941 Fimbrillin-A associated anchor protein Mfa1/Mfa2 PGJ_RS02770 92ad7a59c7df20ec027e7fea627898ba 179 PANTHER PTHR18895 22 156 5.2E-27 T 22-04-2016 PGJ_RS02770 92ad7a59c7df20ec027e7fea627898ba 179 Pfam PF03602 Conserved hypothetical protein 95 1 178 3.2E-39 T 22-04-2016 PGJ_RS02770 92ad7a59c7df20ec027e7fea627898ba 179 Gene3D G3DSA:3.40.50.150 1 179 5.1E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS02770 92ad7a59c7df20ec027e7fea627898ba 179 PANTHER PTHR18895:SF60 22 156 5.2E-27 T 22-04-2016 PGJ_RS02770 92ad7a59c7df20ec027e7fea627898ba 179 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 118 124 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PGJ_RS02770 92ad7a59c7df20ec027e7fea627898ba 179 SUPERFAMILY SSF53335 1 178 2.15E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS02770 92ad7a59c7df20ec027e7fea627898ba 179 PIRSF PIRSF004553 1 179 3.1E-37 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS01055 72696bc34cce85385787c863a8c54a1a 432 PIRSF PIRSF016719 33 428 6.8E-102 T 22-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 PGJ_RS01055 72696bc34cce85385787c863a8c54a1a 432 PANTHER PTHR30480:SF3 16 47 2.8E-93 T 22-04-2016 PGJ_RS01055 72696bc34cce85385787c863a8c54a1a 432 PANTHER PTHR30480:SF3 69 428 2.8E-93 T 22-04-2016 PGJ_RS01055 72696bc34cce85385787c863a8c54a1a 432 PANTHER PTHR30480 16 47 2.8E-93 T 22-04-2016 PGJ_RS01055 72696bc34cce85385787c863a8c54a1a 432 PANTHER PTHR30480 69 428 2.8E-93 T 22-04-2016 PGJ_RS01055 72696bc34cce85385787c863a8c54a1a 432 Pfam PF07075 Protein of unknown function (DUF1343) 83 427 1.7E-120 T 22-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 PGJ_RS04255 3f56f202f97b542102fdafe1711ea26c 201 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 12 173 3.3E-53 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 PGJ_RS04255 3f56f202f97b542102fdafe1711ea26c 201 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 87 172 2.5E-33 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 PGJ_RS04255 3f56f202f97b542102fdafe1711ea26c 201 Gene3D G3DSA:3.30.110.10 84 173 3.0E-33 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 PGJ_RS04255 3f56f202f97b542102fdafe1711ea26c 201 PANTHER PTHR10938 7 201 7.6E-55 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 PGJ_RS04255 3f56f202f97b542102fdafe1711ea26c 201 SUPERFAMILY SSF55200 87 173 1.14E-28 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 PGJ_RS04255 3f56f202f97b542102fdafe1711ea26c 201 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 5 174 25.837 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 PGJ_RS04255 3f56f202f97b542102fdafe1711ea26c 201 Gene3D G3DSA:3.10.20.80 7 82 4.4E-33 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 PGJ_RS04255 3f56f202f97b542102fdafe1711ea26c 201 SUPERFAMILY SSF54364 10 81 3.27E-25 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 PGJ_RS04255 3f56f202f97b542102fdafe1711ea26c 201 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 12 80 1.8E-27 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 PGJ_RS06260 7ea6bd53f6addc04c68bb38f056cdb70 393 SUPERFAMILY SSF46785 230 291 6.82E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06260 7ea6bd53f6addc04c68bb38f056cdb70 393 PANTHER PTHR33295 19 337 1.1E-83 T 22-04-2016 PGJ_RS06260 7ea6bd53f6addc04c68bb38f056cdb70 393 Gene3D G3DSA:3.40.50.300 24 132 1.5E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06260 7ea6bd53f6addc04c68bb38f056cdb70 393 Gene3D G3DSA:1.10.10.10 241 287 2.5E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06260 7ea6bd53f6addc04c68bb38f056cdb70 393 SUPERFAMILY SSF52540 12 158 5.8E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06260 7ea6bd53f6addc04c68bb38f056cdb70 393 PANTHER PTHR33295:SF1 19 337 1.1E-83 T 22-04-2016 PGJ_RS06260 7ea6bd53f6addc04c68bb38f056cdb70 393 Pfam PF13173 AAA domain 31 155 2.4E-21 T 22-04-2016 PGJ_RS04050 fc15ae0467a82e74406943ef1f9fa91c 362 Pfam PF13808 DDE_Tnp_1-associated 6 88 3.3E-22 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal PGJ_RS04050 fc15ae0467a82e74406943ef1f9fa91c 362 Pfam PF01609 Transposase DDE domain 102 330 9.1E-15 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS04050 fc15ae0467a82e74406943ef1f9fa91c 362 PANTHER PTHR30298 6 362 3.8E-75 T 22-04-2016 PGJ_RS03490 fc15ae0467a82e74406943ef1f9fa91c 362 Pfam PF13808 DDE_Tnp_1-associated 6 88 3.3E-22 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal PGJ_RS03490 fc15ae0467a82e74406943ef1f9fa91c 362 Pfam PF01609 Transposase DDE domain 102 330 9.1E-15 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS03490 fc15ae0467a82e74406943ef1f9fa91c 362 PANTHER PTHR30298 6 362 3.8E-75 T 22-04-2016 PGJ_RS07365 b53d11ab23c021d29c885f08226e17f4 105 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 105 23.251 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07365 b53d11ab23c021d29c885f08226e17f4 105 PANTHER PTHR21349 1 104 6.4E-30 T 22-04-2016 PGJ_RS07365 b53d11ab23c021d29c885f08226e17f4 105 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 103 8.2E-33 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 PGJ_RS07365 b53d11ab23c021d29c885f08226e17f4 105 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 103 5.7E-27 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS07365 b53d11ab23c021d29c885f08226e17f4 105 SUPERFAMILY SSF141091 1 103 1.96E-30 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 PGJ_RS04040 fa96bdfca3df9854b9f6ea32d73de72a 396 SUPERFAMILY SSF53187 181 255 3.14E-50 T 22-04-2016 PGJ_RS04040 fa96bdfca3df9854b9f6ea32d73de72a 396 SUPERFAMILY SSF53187 33 130 3.14E-50 T 22-04-2016 PGJ_RS04040 fa96bdfca3df9854b9f6ea32d73de72a 396 SMART SM00646 95 253 3.4E-33 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PGJ_RS04040 fa96bdfca3df9854b9f6ea32d73de72a 396 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 35 253 7.4E-52 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PGJ_RS04040 fa96bdfca3df9854b9f6ea32d73de72a 396 PANTHER PTHR30404 25 289 8.4E-66 T 22-04-2016 PGJ_RS04040 fa96bdfca3df9854b9f6ea32d73de72a 396 PANTHER PTHR30404:SF0 25 289 8.4E-66 T 22-04-2016 PGJ_RS04040 fa96bdfca3df9854b9f6ea32d73de72a 396 Gene3D G3DSA:3.40.630.40 33 131 3.6E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PGJ_RS04040 fa96bdfca3df9854b9f6ea32d73de72a 396 Gene3D G3DSA:3.40.630.40 182 256 3.6E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PGJ_RS03190 a95eeaecf2cc03ae55a88279fe66ac23 95 Pfam PF12728 Helix-turn-helix domain 43 89 3.0E-8 T 22-04-2016 PGJ_RS03190 a95eeaecf2cc03ae55a88279fe66ac23 95 SUPERFAMILY SSF46955 43 94 5.95E-11 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS03190 a95eeaecf2cc03ae55a88279fe66ac23 95 PANTHER PTHR34585 3 95 1.4E-27 T 22-04-2016 PGJ_RS03190 a95eeaecf2cc03ae55a88279fe66ac23 95 Gene3D G3DSA:1.10.10.10 43 92 2.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS06180 411b3895483626ea9123f3637bb61d51 311 Gene3D G3DSA:1.10.150.170 114 218 2.4E-26 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS06180 411b3895483626ea9123f3637bb61d51 311 SUPERFAMILY SSF53335 216 311 5.81E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS06180 411b3895483626ea9123f3637bb61d51 311 SUPERFAMILY SSF53335 10 114 5.81E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS06180 411b3895483626ea9123f3637bb61d51 311 PANTHER PTHR11265:SF0 9 311 1.4E-112 T 22-04-2016 PGJ_RS06180 411b3895483626ea9123f3637bb61d51 311 PIRSF PIRSF004486 5 311 4.1E-105 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS06180 411b3895483626ea9123f3637bb61d51 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 11 311 34.538 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS06180 411b3895483626ea9123f3637bb61d51 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 9 310 4.4E-88 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS06180 411b3895483626ea9123f3637bb61d51 311 PANTHER PTHR11265 9 311 1.4E-112 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS06180 411b3895483626ea9123f3637bb61d51 311 Pfam PF01795 MraW methylase family 9 311 9.6E-89 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS06180 411b3895483626ea9123f3637bb61d51 311 SUPERFAMILY SSF81799 115 216 2.75E-23 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PGJ_RS06180 411b3895483626ea9123f3637bb61d51 311 Gene3D G3DSA:3.40.50.150 11 111 3.6E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS06180 411b3895483626ea9123f3637bb61d51 311 Gene3D G3DSA:3.40.50.150 219 311 3.6E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS01345 f7404761ecec040239913774ac958f3f 503 PANTHER PTHR31901:SF5 6 500 1.3E-50 T 22-04-2016 PGJ_RS01345 f7404761ecec040239913774ac958f3f 503 PANTHER PTHR31901 6 500 1.3E-50 T 22-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- PGJ_RS01345 f7404761ecec040239913774ac958f3f 503 Pfam PF03321 GH3 auxin-responsive promoter 20 492 9.4E-102 T 22-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- PGJ_RS05605 960e17f3563553c792aa863b9b9d0225 739 Pfam PF00664 ABC transporter transmembrane region 182 448 6.8E-27 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PGJ_RS05605 960e17f3563553c792aa863b9b9d0225 739 Gene3D G3DSA:1.20.1560.10 167 472 5.2E-66 T 22-04-2016 PGJ_RS05605 960e17f3563553c792aa863b9b9d0225 739 SUPERFAMILY SSF90123 167 473 1.83E-57 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PGJ_RS05605 960e17f3563553c792aa863b9b9d0225 739 Gene3D G3DSA:3.40.50.300 497 729 2.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05605 960e17f3563553c792aa863b9b9d0225 739 SMART SM00382 524 710 6.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS05605 960e17f3563553c792aa863b9b9d0225 739 Pfam PF03412 Peptidase C39 family 7 128 6.9E-31 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 PGJ_RS05605 960e17f3563553c792aa863b9b9d0225 739 Gene3D G3DSA:3.90.70.10 10 128 8.9E-18 T 22-04-2016 PGJ_RS05605 960e17f3563553c792aa863b9b9d0225 739 PANTHER PTHR24221 151 736 7.7E-154 T 22-04-2016 PGJ_RS05605 960e17f3563553c792aa863b9b9d0225 739 SUPERFAMILY SSF52540 494 734 2.55E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05605 960e17f3563553c792aa863b9b9d0225 739 Pfam PF00005 ABC transporter 515 664 1.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS05605 960e17f3563553c792aa863b9b9d0225 739 ProSitePatterns PS00211 ABC transporters family signature. 636 650 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS05605 960e17f3563553c792aa863b9b9d0225 739 PANTHER PTHR24221:SF138 151 736 7.7E-154 T 22-04-2016 PGJ_RS06500 8e9da5de14e5e3f906cf82180dce42df 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 366 51.694 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS06500 8e9da5de14e5e3f906cf82180dce42df 376 PANTHER PTHR21148 1 371 6.9E-143 T 22-04-2016 PGJ_RS06500 8e9da5de14e5e3f906cf82180dce42df 376 PANTHER PTHR21148:SF26 1 371 6.9E-143 T 22-04-2016 PGJ_RS06500 8e9da5de14e5e3f906cf82180dce42df 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 4 374 4.4E-135 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS06500 8e9da5de14e5e3f906cf82180dce42df 376 Gene3D G3DSA:3.20.20.105 1 372 3.2E-146 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS06500 8e9da5de14e5e3f906cf82180dce42df 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 4 373 2.9E-142 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS06500 8e9da5de14e5e3f906cf82180dce42df 376 SUPERFAMILY SSF51713 1 371 1.44E-142 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS06500 8e9da5de14e5e3f906cf82180dce42df 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 366 5.7E-78 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS08325 f081e160d8f886eaa9b4ef732fa9e74a 89 PANTHER PTHR19836 1 89 9.6E-52 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08325 f081e160d8f886eaa9b4ef732fa9e74a 89 SUPERFAMILY SSF57716 2 89 2.71E-33 T 22-04-2016 PGJ_RS08325 f081e160d8f886eaa9b4ef732fa9e74a 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 25.193 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid PGJ_RS08325 f081e160d8f886eaa9b4ef732fa9e74a 89 Gene3D G3DSA:4.10.830.10 35 89 3.5E-30 T 22-04-2016 PGJ_RS08325 f081e160d8f886eaa9b4ef732fa9e74a 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 PGJ_RS08325 f081e160d8f886eaa9b4ef732fa9e74a 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 1.5E-27 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS02735 b2d6e4a646178f8c5522d5146a7913ca 224 PIRSF PIRSF003078 3 224 9.3E-62 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PGJ_RS02735 b2d6e4a646178f8c5522d5146a7913ca 224 PANTHER PTHR31760 19 202 2.5E-51 T 22-04-2016 PGJ_RS02735 b2d6e4a646178f8c5522d5146a7913ca 224 PANTHER PTHR31760:SF0 19 202 2.5E-51 T 22-04-2016 PGJ_RS02735 b2d6e4a646178f8c5522d5146a7913ca 224 Pfam PF02527 rRNA small subunit methyltransferase G 34 174 1.5E-35 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PGJ_RS02735 b2d6e4a646178f8c5522d5146a7913ca 224 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 44 220 1.8E-34 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PGJ_RS02735 b2d6e4a646178f8c5522d5146a7913ca 224 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 25 222 23.74 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PGJ_RS02735 b2d6e4a646178f8c5522d5146a7913ca 224 SUPERFAMILY SSF53335 20 199 2.92E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS02735 b2d6e4a646178f8c5522d5146a7913ca 224 Gene3D G3DSA:3.40.50.150 18 210 1.4E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS06275 6339c054d143e2e02f9b89780ada6139 88 Gene3D G3DSA:3.30.70.240 3 70 4.6E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PGJ_RS09735 5e5a5de530ec5277b4d6d063e9408710 479 Gene3D G3DSA:1.25.40.10 390 463 3.4E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09735 5e5a5de530ec5277b4d6d063e9408710 479 Pfam PF00691 OmpA family 197 271 1.7E-5 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS09735 5e5a5de530ec5277b4d6d063e9408710 479 Pfam PF12984 Domain of unknown function, B. Theta Gene description (DUF3868) 5 108 3.3E-27 T 22-04-2016 IPR024480 Domain of unknown function DUF3868 PGJ_RS09735 5e5a5de530ec5277b4d6d063e9408710 479 Gene3D G3DSA:3.30.1330.60 183 286 1.4E-12 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS09735 5e5a5de530ec5277b4d6d063e9408710 479 SUPERFAMILY SSF48452 383 462 9.21E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS09735 5e5a5de530ec5277b4d6d063e9408710 479 SUPERFAMILY SSF103088 189 286 3.01E-10 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS01660 2659f742e1961a38d52511ff133aa5ef 658 PANTHER PTHR10569 292 646 8.7E-56 T 22-04-2016 IPR010401 Glycogen debranching enzyme GO:0004134|GO:0004135|GO:0005980 KEGG: 00500+3.2.1.33+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PGJ_RS01660 2659f742e1961a38d52511ff133aa5ef 658 SUPERFAMILY SSF48208 180 633 3.0E-64 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PGJ_RS01660 2659f742e1961a38d52511ff133aa5ef 658 Pfam PF06202 Amylo-alpha-1,6-glucosidase 290 631 3.0E-65 T 22-04-2016 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25+3.2.1.33|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PGJ_RS01660 2659f742e1961a38d52511ff133aa5ef 658 Pfam PF12439 Glycogen debranching enzyme N terminal 20 240 1.1E-62 T 22-04-2016 IPR024742 Glycogen debranching enzyme, bacterial and archaeal type, N-terminal PGJ_RS05000 a8ad83523510ec80c6b78ca3bc406964 238 PANTHER PTHR39209 1 231 2.8E-44 T 22-04-2016 PGJ_RS05000 a8ad83523510ec80c6b78ca3bc406964 238 Pfam PF03483 B3/4 domain 65 187 5.9E-17 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PGJ_RS05000 a8ad83523510ec80c6b78ca3bc406964 238 Gene3D G3DSA:3.50.40.10 60 188 5.3E-17 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PGJ_RS05000 a8ad83523510ec80c6b78ca3bc406964 238 SMART SM00873 62 214 9.4E-14 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PGJ_RS05000 a8ad83523510ec80c6b78ca3bc406964 238 SUPERFAMILY SSF56037 54 219 1.05E-22 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PGJ_RS01010 c7cf681d20b74dc7e096ac2dfeb00cf8 163 PANTHER PTHR30231 2 162 2.3E-51 T 22-04-2016 PGJ_RS01010 c7cf681d20b74dc7e096ac2dfeb00cf8 163 Gene3D G3DSA:3.30.420.10 3 162 3.7E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS01010 c7cf681d20b74dc7e096ac2dfeb00cf8 163 Pfam PF16473 3' exoribonuclease, RNase T-like 5 160 1.2E-16 T 22-04-2016 IPR033390 3'-5' exoribonuclease Rv2179c-like domain PGJ_RS01010 c7cf681d20b74dc7e096ac2dfeb00cf8 163 PANTHER PTHR30231:SF10 2 162 2.3E-51 T 22-04-2016 PGJ_RS01010 c7cf681d20b74dc7e096ac2dfeb00cf8 163 SMART SM00479 3 163 6.9E-8 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PGJ_RS01010 c7cf681d20b74dc7e096ac2dfeb00cf8 163 SUPERFAMILY SSF53098 4 162 3.85E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PGJ_RS03250 1b014d900f566630cc4ec5fc41fa8d44 375 ProSitePatterns PS00336 Beta-lactamase class-C active site. 84 91 - T 22-04-2016 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 PGJ_RS03250 1b014d900f566630cc4ec5fc41fa8d44 375 SUPERFAMILY SSF56601 37 358 9.9E-45 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS03250 1b014d900f566630cc4ec5fc41fa8d44 375 PANTHER PTHR22935:SF64 34 350 7.0E-33 T 22-04-2016 PGJ_RS03250 1b014d900f566630cc4ec5fc41fa8d44 375 PANTHER PTHR22935 34 350 7.0E-33 T 22-04-2016 PGJ_RS03250 1b014d900f566630cc4ec5fc41fa8d44 375 Pfam PF00144 Beta-lactamase 79 356 2.6E-31 T 22-04-2016 IPR001466 Beta-lactamase-related PGJ_RS03250 1b014d900f566630cc4ec5fc41fa8d44 375 Gene3D G3DSA:3.40.710.10 35 371 3.9E-48 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PGJ_RS06990 859f6c0efb32a748e45069d0384161cb 470 Pfam PF04468 PSP1 C-terminal conserved region 108 192 1.5E-23 T 22-04-2016 IPR007557 PSP1, C-terminal PGJ_RS06990 859f6c0efb32a748e45069d0384161cb 470 PANTHER PTHR21600:SF3 21 305 3.2E-55 T 22-04-2016 PGJ_RS06990 859f6c0efb32a748e45069d0384161cb 470 PANTHER PTHR21600 21 305 3.2E-55 T 22-04-2016 PGJ_RS03210 55dd40c6df01b48b762c7ccab6592248 345 Gene3D G3DSA:1.10.600.10 140 290 5.6E-13 T 22-04-2016 IPR008949 Isoprenoid synthase domain PGJ_RS03210 55dd40c6df01b48b762c7ccab6592248 345 SUPERFAMILY SSF48576 66 291 4.93E-17 T 22-04-2016 IPR008949 Isoprenoid synthase domain PGJ_RS03210 55dd40c6df01b48b762c7ccab6592248 345 Pfam PF00348 Polyprenyl synthetase 126 272 1.8E-11 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PGJ_RS05400 148a93ca36662483daf8ab0b6d9ed65b 856 Pfam PF00343 Carbohydrate phosphorylase 269 621 6.7E-19 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PGJ_RS05400 148a93ca36662483daf8ab0b6d9ed65b 856 Pfam PF00343 Carbohydrate phosphorylase 126 174 6.6E-5 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PGJ_RS05400 148a93ca36662483daf8ab0b6d9ed65b 856 PANTHER PTHR11468 109 476 8.3E-259 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PGJ_RS05400 148a93ca36662483daf8ab0b6d9ed65b 856 PANTHER PTHR11468 494 777 8.3E-259 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PGJ_RS05400 148a93ca36662483daf8ab0b6d9ed65b 856 PIRSF PIRSF000460 6 796 2.3E-284 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PGJ_RS05400 148a93ca36662483daf8ab0b6d9ed65b 856 Gene3D G3DSA:3.40.50.2000 32 418 5.7E-75 T 22-04-2016 PGJ_RS05400 148a93ca36662483daf8ab0b6d9ed65b 856 Gene3D G3DSA:3.40.50.2000 419 712 1.1E-80 T 22-04-2016 PGJ_RS05400 148a93ca36662483daf8ab0b6d9ed65b 856 Pfam PF11897 Protein of unknown function (DUF3417) 21 122 2.9E-32 T 22-04-2016 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PGJ_RS05400 148a93ca36662483daf8ab0b6d9ed65b 856 PANTHER PTHR11468:SF9 109 476 8.3E-259 T 22-04-2016 PGJ_RS05400 148a93ca36662483daf8ab0b6d9ed65b 856 PANTHER PTHR11468:SF9 494 777 8.3E-259 T 22-04-2016 PGJ_RS05400 148a93ca36662483daf8ab0b6d9ed65b 856 SUPERFAMILY SSF53756 7 743 9.87E-197 T 22-04-2016 PGJ_RS05400 148a93ca36662483daf8ab0b6d9ed65b 856 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 109 709 1.5E-252 T 22-04-2016 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PGJ_RS01400 cec72177ad70f83edb69d8d582324405 167 SUPERFAMILY SSF52788 2 154 1.96E-47 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PGJ_RS01400 cec72177ad70f83edb69d8d582324405 167 PANTHER PTHR11717:SF7 2 154 5.5E-60 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PGJ_RS01400 cec72177ad70f83edb69d8d582324405 167 SMART SM00226 4 153 1.8E-40 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PGJ_RS01400 cec72177ad70f83edb69d8d582324405 167 PANTHER PTHR11717 2 154 5.5E-60 T 22-04-2016 PGJ_RS01400 cec72177ad70f83edb69d8d582324405 167 Gene3D G3DSA:3.40.50.270 2 159 7.7E-53 T 22-04-2016 PGJ_RS01400 cec72177ad70f83edb69d8d582324405 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 4.8E-20 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PGJ_RS01400 cec72177ad70f83edb69d8d582324405 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 4.8E-20 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PGJ_RS01400 cec72177ad70f83edb69d8d582324405 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 4.8E-20 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PGJ_RS01400 cec72177ad70f83edb69d8d582324405 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 106 119 4.8E-20 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PGJ_RS01400 cec72177ad70f83edb69d8d582324405 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 82 97 4.8E-20 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PGJ_RS01400 cec72177ad70f83edb69d8d582324405 167 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 150 9.0E-39 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PGJ_RS09045 90555566dfd1e48002f339320ef2d083 177 PANTHER PTHR23029 1 177 8.6E-23 T 22-04-2016 PGJ_RS09045 90555566dfd1e48002f339320ef2d083 177 Gene3D G3DSA:3.40.50.1240 1 175 3.5E-33 T 22-04-2016 IPR029033 Histidine phosphatase superfamily PGJ_RS09045 90555566dfd1e48002f339320ef2d083 177 SUPERFAMILY SSF53254 1 176 4.93E-35 T 22-04-2016 IPR029033 Histidine phosphatase superfamily PGJ_RS09045 90555566dfd1e48002f339320ef2d083 177 SMART SM00855 2 150 4.5E-15 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PGJ_RS09045 90555566dfd1e48002f339320ef2d083 177 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 162 5.9E-29 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PGJ_RS08660 b7986f83354cb3722f3a47fe0c51d2df 212 Pfam PF08889 WbqC-like protein family 15 148 6.5E-31 T 22-04-2016 IPR014985 WbqC-like protein family PGJ_RS00565 7e13ad9e8ed8eab1c5afc5f02c287e21 191 SUPERFAMILY SSF56925 28 186 2.88E-14 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PGJ_RS00565 7e13ad9e8ed8eab1c5afc5f02c287e21 191 Pfam PF13505 Outer membrane protein beta-barrel domain 12 185 1.7E-9 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel PGJ_RS00565 7e13ad9e8ed8eab1c5afc5f02c287e21 191 Gene3D G3DSA:2.40.160.20 29 183 5.3E-8 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PGJ_RS04985 137aa04749d670fef3a7c078a03733f6 178 PANTHER PTHR22573 12 178 4.1E-47 T 22-04-2016 PGJ_RS04985 137aa04749d670fef3a7c078a03733f6 178 Gene3D G3DSA:3.40.50.2020 2 178 4.4E-59 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS04985 137aa04749d670fef3a7c078a03733f6 178 SUPERFAMILY SSF53271 4 177 6.16E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like PGJ_RS04985 137aa04749d670fef3a7c078a03733f6 178 Pfam PF00156 Phosphoribosyl transferase domain 20 160 2.7E-22 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PGJ_RS04985 137aa04749d670fef3a7c078a03733f6 178 PANTHER PTHR22573:SF56 12 178 4.1E-47 T 22-04-2016 PGJ_RS05915 1c422f5a9b485102822c7df3961c6949 454 Pfam PF01554 MatE 24 184 1.1E-30 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS05915 1c422f5a9b485102822c7df3961c6949 454 Pfam PF01554 MatE 246 405 9.8E-15 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS05915 1c422f5a9b485102822c7df3961c6949 454 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 418 6.2E-55 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS05915 1c422f5a9b485102822c7df3961c6949 454 PANTHER PTHR11206:SF132 7 444 3.0E-94 T 22-04-2016 PGJ_RS05915 1c422f5a9b485102822c7df3961c6949 454 PANTHER PTHR11206 7 444 3.0E-94 T 22-04-2016 PGJ_RS05915 1c422f5a9b485102822c7df3961c6949 454 PIRSF PIRSF006603 1 449 2.4E-92 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS08405 b0aad8404668fb32d4a21c7251396e33 158 PIRSF PIRSF002122 2 158 1.1E-50 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 PGJ_RS08405 b0aad8404668fb32d4a21c7251396e33 158 PANTHER PTHR11205 8 158 6.9E-75 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 PGJ_RS08405 b0aad8404668fb32d4a21c7251396e33 158 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 157 5.1E-59 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PGJ_RS08405 b0aad8404668fb32d4a21c7251396e33 158 Pfam PF00177 Ribosomal protein S7p/S5e 2 151 2.9E-58 T 22-04-2016 IPR023798 Ribosomal protein S7 domain PGJ_RS08405 b0aad8404668fb32d4a21c7251396e33 158 SUPERFAMILY SSF47973 7 151 7.98E-54 T 22-04-2016 IPR023798 Ribosomal protein S7 domain PGJ_RS08405 b0aad8404668fb32d4a21c7251396e33 158 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 158 32.706 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PGJ_RS08405 b0aad8404668fb32d4a21c7251396e33 158 Gene3D G3DSA:1.10.455.10 7 158 1.3E-58 T 22-04-2016 IPR023798 Ribosomal protein S7 domain PGJ_RS08225 04e40068289e385a240684e5d93f9d20 202 PANTHER PTHR36122:SF1 12 196 8.9E-36 T 22-04-2016 PGJ_RS08225 04e40068289e385a240684e5d93f9d20 202 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 14 195 3.2E-24 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PGJ_RS08225 04e40068289e385a240684e5d93f9d20 202 PANTHER PTHR36122 12 196 8.9E-36 T 22-04-2016 PGJ_RS08225 04e40068289e385a240684e5d93f9d20 202 Pfam PF04973 Nicotinamide mononucleotide transporter 13 191 1.9E-43 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PGJ_RS04495 55c762eda28252b0659cce3ed88e3172 381 PANTHER PTHR11669:SF8 130 249 8.7E-47 T 22-04-2016 PGJ_RS04495 55c762eda28252b0659cce3ed88e3172 381 PANTHER PTHR11669:SF8 1 88 8.7E-47 T 22-04-2016 PGJ_RS04495 55c762eda28252b0659cce3ed88e3172 381 PANTHER PTHR11669 130 249 8.7E-47 T 22-04-2016 PGJ_RS04495 55c762eda28252b0659cce3ed88e3172 381 PANTHER PTHR11669 1 88 8.7E-47 T 22-04-2016 PGJ_RS04495 55c762eda28252b0659cce3ed88e3172 381 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 14 242 1.7E-60 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PGJ_RS04495 55c762eda28252b0659cce3ed88e3172 381 Gene3D G3DSA:3.40.50.300 3 83 2.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04495 55c762eda28252b0659cce3ed88e3172 381 Gene3D G3DSA:3.40.50.300 123 206 2.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04495 55c762eda28252b0659cce3ed88e3172 381 SUPERFAMILY SSF52540 3 84 3.54E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04495 55c762eda28252b0659cce3ed88e3172 381 SUPERFAMILY SSF52540 124 247 3.54E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04495 55c762eda28252b0659cce3ed88e3172 381 Pfam PF13177 DNA polymerase III, delta subunit 11 206 4.8E-39 T 22-04-2016 PGJ_RS09025 5a3a0579d079b92a659a1ba29c5b45b1 177 Pfam PF10543 ORF6N domain 14 99 3.1E-30 T 22-04-2016 IPR018873 KilA-N, DNA-binding domain PGJ_RS02825 628da80191cdaa60ee25d63e139ce7ea 662 SUPERFAMILY SSF100950 38 314 2.75E-67 T 22-04-2016 PGJ_RS02825 628da80191cdaa60ee25d63e139ce7ea 662 PANTHER PTHR11280 20 354 2.5E-293 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 PGJ_RS02825 628da80191cdaa60ee25d63e139ce7ea 662 PANTHER PTHR11280 379 661 2.5E-293 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 PGJ_RS02825 628da80191cdaa60ee25d63e139ce7ea 662 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 43 266 1.7E-23 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 PGJ_RS02825 628da80191cdaa60ee25d63e139ce7ea 662 SUPERFAMILY SSF102588 449 652 5.1E-50 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain PGJ_RS02825 628da80191cdaa60ee25d63e139ce7ea 662 SUPERFAMILY SSF102588 376 416 5.1E-50 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain PGJ_RS02825 628da80191cdaa60ee25d63e139ce7ea 662 PANTHER PTHR11280:SF7 20 354 2.5E-293 T 22-04-2016 PGJ_RS02825 628da80191cdaa60ee25d63e139ce7ea 662 PANTHER PTHR11280:SF7 379 661 2.5E-293 T 22-04-2016 PGJ_RS02825 628da80191cdaa60ee25d63e139ce7ea 662 Gene3D G3DSA:3.40.50.10320 376 416 1.8E-64 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain PGJ_RS02825 628da80191cdaa60ee25d63e139ce7ea 662 Gene3D G3DSA:3.40.50.10320 462 661 1.8E-64 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain PGJ_RS02825 628da80191cdaa60ee25d63e139ce7ea 662 Gene3D G3DSA:3.40.50.1360 38 298 4.0E-71 T 22-04-2016 PGJ_RS02825 628da80191cdaa60ee25d63e139ce7ea 662 Pfam PF02585 GlcNAc-PI de-N-acetylase 381 558 1.3E-20 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PGJ_RS09810 d4166e1f9fd2c32fa6024e1365eea055 399 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 84 391 6.1E-147 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PGJ_RS09810 d4166e1f9fd2c32fa6024e1365eea055 399 PANTHER PTHR30578:SF1 4 397 7.7E-189 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PGJ_RS09810 d4166e1f9fd2c32fa6024e1365eea055 399 Pfam PF03116 NQR2, RnfD, RnfE family 43 388 9.7E-106 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 PGJ_RS09810 d4166e1f9fd2c32fa6024e1365eea055 399 PANTHER PTHR30578 4 397 7.7E-189 T 22-04-2016 PGJ_RS09810 d4166e1f9fd2c32fa6024e1365eea055 399 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 3 395 34.145 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PGJ_RS09810 d4166e1f9fd2c32fa6024e1365eea055 399 PIRSF PIRSF016055 2 397 4.4E-162 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PGJ_RS09800 ca7d7d405693bba5c85d62a1428b4bdc 209 PIRSF PIRSF006102 4 209 1.6E-66 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PGJ_RS09800 ca7d7d405693bba5c85d62a1428b4bdc 209 PANTHER PTHR30586 3 209 1.3E-112 T 22-04-2016 PGJ_RS09800 ca7d7d405693bba5c85d62a1428b4bdc 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 10 195 5.6E-60 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PGJ_RS09800 ca7d7d405693bba5c85d62a1428b4bdc 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 208 1.6E-102 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 PGJ_RS09800 ca7d7d405693bba5c85d62a1428b4bdc 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 3 208 34.476 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 PGJ_RS09800 ca7d7d405693bba5c85d62a1428b4bdc 209 PANTHER PTHR30586:SF1 3 209 1.3E-112 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 PGJ_RS00520 88af67a09293de6b2bec4e49818d3cf2 307 PANTHER PTHR12737 4 305 1.7E-101 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PGJ_RS00520 88af67a09293de6b2bec4e49818d3cf2 307 PIRSF PIRSF028188 1 307 2.1E-114 T 22-04-2016 IPR014541 Predicted amidinotransferase, FN0238 type PGJ_RS00520 88af67a09293de6b2bec4e49818d3cf2 307 PANTHER PTHR12737:SF21 4 305 1.7E-101 T 22-04-2016 PGJ_RS00520 88af67a09293de6b2bec4e49818d3cf2 307 Pfam PF02274 Amidinotransferase 11 305 1.4E-78 T 22-04-2016 PGJ_RS00520 88af67a09293de6b2bec4e49818d3cf2 307 SUPERFAMILY SSF55909 7 303 1.18E-38 T 22-04-2016 PGJ_RS00520 88af67a09293de6b2bec4e49818d3cf2 307 Gene3D G3DSA:3.75.10.10 7 303 4.0E-16 T 22-04-2016 PGJ_RS00745 a8ff2c0387e022f9b1af1693137b2e06 193 SUPERFAMILY SSF88946 1 109 1.84E-21 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS00745 a8ff2c0387e022f9b1af1693137b2e06 193 Gene3D G3DSA:1.10.1740.10 4 112 1.0E-22 T 22-04-2016 PGJ_RS00745 a8ff2c0387e022f9b1af1693137b2e06 193 Pfam PF08281 Sigma-70, region 4 133 173 9.2E-11 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS00745 a8ff2c0387e022f9b1af1693137b2e06 193 Gene3D G3DSA:1.10.10.10 132 190 1.5E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS00745 a8ff2c0387e022f9b1af1693137b2e06 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 189 2.7E-26 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS00745 a8ff2c0387e022f9b1af1693137b2e06 193 Pfam PF04542 Sigma-70 region 2 29 94 3.2E-11 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS00745 a8ff2c0387e022f9b1af1693137b2e06 193 SUPERFAMILY SSF88659 122 189 1.87E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PGJ_RS00745 a8ff2c0387e022f9b1af1693137b2e06 193 PANTHER PTHR30173 2 189 1.0E-35 T 22-04-2016 PGJ_RS07255 d81634647e921dc425980de3e7682b5c 188 SUPERFAMILY SSF159941 1 150 1.31E-27 T 22-04-2016 IPR024047 Protein MM3350-like domain PGJ_RS07255 d81634647e921dc425980de3e7682b5c 188 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 16 130 3.1E-8 T 22-04-2016 IPR012912 Plasmid pRiA4b, Orf3 PGJ_RS07255 d81634647e921dc425980de3e7682b5c 188 Gene3D G3DSA:3.10.290.30 2 135 4.1E-24 T 22-04-2016 IPR024047 Protein MM3350-like domain PGJ_RS06215 c7e4d5146e5c57632d5c1f19789732b5 451 Gene3D G3DSA:3.40.630.10 2 188 1.8E-60 T 22-04-2016 PGJ_RS06215 c7e4d5146e5c57632d5c1f19789732b5 451 Gene3D G3DSA:3.40.630.10 364 447 1.8E-60 T 22-04-2016 PGJ_RS06215 c7e4d5146e5c57632d5c1f19789732b5 451 PANTHER PTHR11014:SF72 281 451 1.4E-200 T 22-04-2016 PGJ_RS06215 c7e4d5146e5c57632d5c1f19789732b5 451 PANTHER PTHR11014:SF72 2 263 1.4E-200 T 22-04-2016 PGJ_RS06215 c7e4d5146e5c57632d5c1f19789732b5 451 Pfam PF07687 Peptidase dimerisation domain 192 351 2.2E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PGJ_RS06215 c7e4d5146e5c57632d5c1f19789732b5 451 PANTHER PTHR11014 281 451 1.4E-200 T 22-04-2016 PGJ_RS06215 c7e4d5146e5c57632d5c1f19789732b5 451 PANTHER PTHR11014 2 263 1.4E-200 T 22-04-2016 PGJ_RS06215 c7e4d5146e5c57632d5c1f19789732b5 451 Gene3D G3DSA:3.30.70.360 194 360 2.1E-61 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PGJ_RS06215 c7e4d5146e5c57632d5c1f19789732b5 451 Pfam PF01546 Peptidase family M20/M25/M40 81 446 8.4E-35 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PGJ_RS06215 c7e4d5146e5c57632d5c1f19789732b5 451 SUPERFAMILY SSF53187 2 194 1.11E-58 T 22-04-2016 PGJ_RS06215 c7e4d5146e5c57632d5c1f19789732b5 451 SUPERFAMILY SSF53187 365 447 1.11E-58 T 22-04-2016 PGJ_RS01485 fea6963d71901484792e8f01f75133fc 255 SUPERFAMILY SSF53335 16 234 5.93E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS01485 fea6963d71901484792e8f01f75133fc 255 PANTHER PTHR10108 55 238 5.2E-24 T 22-04-2016 PGJ_RS01485 fea6963d71901484792e8f01f75133fc 255 PANTHER PTHR10108:SF806 55 238 5.2E-24 T 22-04-2016 PGJ_RS01485 fea6963d71901484792e8f01f75133fc 255 Pfam PF13489 Methyltransferase domain 39 178 6.5E-13 T 22-04-2016 PGJ_RS01485 fea6963d71901484792e8f01f75133fc 255 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 18 255 3.5E-61 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 PGJ_RS01485 fea6963d71901484792e8f01f75133fc 255 Gene3D G3DSA:3.40.50.150 51 255 3.6E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS01485 fea6963d71901484792e8f01f75133fc 255 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 10 255 27.617 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 PGJ_RS07285 e56c9caccd15e9170697af638faf6d2f 172 SUPERFAMILY SSF47729 33 117 2.8E-12 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS07285 e56c9caccd15e9170697af638faf6d2f 172 Pfam PF00216 Bacterial DNA-binding protein 37 98 1.2E-7 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS07285 e56c9caccd15e9170697af638faf6d2f 172 Gene3D G3DSA:4.10.520.10 34 116 7.5E-9 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS07285 e56c9caccd15e9170697af638faf6d2f 172 TIGRFAM TIGR01201 HU_rel: putative DNA-binding protein 1 172 1.8E-57 T 22-04-2016 IPR005902 Putative DNA-binding protein, HU-related PGJ_RS02630 9e2540f02a0440bca716489e6e4834d4 139 PANTHER PTHR30266 4 139 3.3E-49 T 22-04-2016 PGJ_RS02630 9e2540f02a0440bca716489e6e4834d4 139 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 14 27 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site PGJ_RS02630 9e2540f02a0440bca716489e6e4834d4 139 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 139 5.1E-47 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PGJ_RS02630 9e2540f02a0440bca716489e6e4834d4 139 PANTHER PTHR30266:SF2 4 139 3.3E-49 T 22-04-2016 PGJ_RS02630 9e2540f02a0440bca716489e6e4834d4 139 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 4 139 26.166 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PGJ_RS02630 9e2540f02a0440bca716489e6e4834d4 139 SUPERFAMILY SSF81330 13 133 1.83E-36 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PGJ_RS02630 9e2540f02a0440bca716489e6e4834d4 139 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 137 4.3E-45 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PGJ_RS02630 9e2540f02a0440bca716489e6e4834d4 139 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 99 108 2.5E-9 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PGJ_RS02630 9e2540f02a0440bca716489e6e4834d4 139 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 90 98 2.5E-9 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PGJ_RS02630 9e2540f02a0440bca716489e6e4834d4 139 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 7 21 2.5E-9 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PGJ_RS07755 b310623c11b28020cd1abcaa356a0ce1 678 Gene3D G3DSA:1.20.1050.40 10 141 1.7E-21 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal PGJ_RS07755 b310623c11b28020cd1abcaa356a0ce1 678 PANTHER PTHR11804:SF8 2 678 1.5E-232 T 22-04-2016 PGJ_RS07755 b310623c11b28020cd1abcaa356a0ce1 678 Pfam PF01432 Peptidase family M3 226 676 1.3E-141 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 PGJ_RS07755 b310623c11b28020cd1abcaa356a0ce1 678 SUPERFAMILY SSF55486 7 676 6.11E-181 T 22-04-2016 PGJ_RS07755 b310623c11b28020cd1abcaa356a0ce1 678 PANTHER PTHR11804 2 678 1.5E-232 T 22-04-2016 PGJ_RS07755 b310623c11b28020cd1abcaa356a0ce1 678 Gene3D G3DSA:3.40.390.10 362 501 3.4E-56 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PGJ_RS07755 b310623c11b28020cd1abcaa356a0ce1 678 Gene3D G3DSA:1.10.1370.10 143 352 9.6E-118 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PGJ_RS07755 b310623c11b28020cd1abcaa356a0ce1 678 Gene3D G3DSA:1.10.1370.10 502 677 9.6E-118 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PGJ_RS00440 ae386f8000ebe1a5ea4f3d39eddbe01d 126 Gene3D G3DSA:1.10.10.60 16 92 2.8E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS00440 ae386f8000ebe1a5ea4f3d39eddbe01d 126 SUPERFAMILY SSF46689 3 107 1.79E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09210 ae386f8000ebe1a5ea4f3d39eddbe01d 126 Gene3D G3DSA:1.10.10.60 16 92 2.8E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS09210 ae386f8000ebe1a5ea4f3d39eddbe01d 126 SUPERFAMILY SSF46689 3 107 1.79E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 573 666 1.7E-22 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 49 124 3.8E-6 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 SUPERFAMILY SSF51445 150 565 3.59E-85 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 PIRSF PIRSF000463 1 668 1.8E-182 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 SUPERFAMILY SSF81296 42 139 1.62E-13 T 22-04-2016 IPR014756 Immunoglobulin E-set PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 PANTHER PTHR10357:SF110 1 666 6.4E-241 T 22-04-2016 PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 Gene3D G3DSA:2.60.40.1180 576 666 3.0E-11 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 SUPERFAMILY SSF51011 576 666 2.64E-13 T 22-04-2016 PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 Gene3D G3DSA:2.60.40.10 40 138 2.0E-15 T 22-04-2016 IPR013783 Immunoglobulin-like fold PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 PANTHER PTHR10357 1 666 6.4E-241 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 Gene3D G3DSA:3.20.20.80 159 557 2.3E-69 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 Pfam PF00128 Alpha amylase, catalytic domain 200 261 2.1E-10 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PGJ_RS07775 76a391df92a4ae3b7236dcf562205e6e 668 SMART SM00642 191 535 4.5E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PGJ_RS00890 65a1f08cd6f7dac11650561a520d3a1e 163 SUPERFAMILY SSF111384 17 160 1.31E-29 T 22-04-2016 IPR024930 Skp domain PGJ_RS00890 65a1f08cd6f7dac11650561a520d3a1e 163 PANTHER PTHR35089 2 156 4.1E-21 T 22-04-2016 PGJ_RS00890 65a1f08cd6f7dac11650561a520d3a1e 163 SMART SM00935 6 161 1.1E-39 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 PGJ_RS00890 65a1f08cd6f7dac11650561a520d3a1e 163 Pfam PF03938 Outer membrane protein (OmpH-like) 8 160 4.3E-35 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 PGJ_RS00890 65a1f08cd6f7dac11650561a520d3a1e 163 Gene3D G3DSA:3.30.910.20 83 160 6.8E-25 T 22-04-2016 PGJ_RS00890 65a1f08cd6f7dac11650561a520d3a1e 163 Gene3D G3DSA:3.30.910.20 7 49 6.8E-25 T 22-04-2016 PGJ_RS00595 525ffa7d81f6c5a58c68b6db8441ee2c 382 Pfam PF13439 Glycosyltransferase Family 4 17 177 2.1E-18 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PGJ_RS00595 525ffa7d81f6c5a58c68b6db8441ee2c 382 PANTHER PTHR12526:SF399 2 375 8.3E-59 T 22-04-2016 PGJ_RS00595 525ffa7d81f6c5a58c68b6db8441ee2c 382 SUPERFAMILY SSF53756 14 376 4.17E-72 T 22-04-2016 PGJ_RS00595 525ffa7d81f6c5a58c68b6db8441ee2c 382 PANTHER PTHR12526 2 375 8.3E-59 T 22-04-2016 PGJ_RS00595 525ffa7d81f6c5a58c68b6db8441ee2c 382 Gene3D G3DSA:3.40.50.2000 161 351 2.0E-24 T 22-04-2016 PGJ_RS00595 525ffa7d81f6c5a58c68b6db8441ee2c 382 Pfam PF00534 Glycosyl transferases group 1 188 351 6.6E-25 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 PGJ_RS05960 d57541c57adf95f85b7479a024a52aa6 97 PANTHER PTHR24012 4 89 1.4E-25 T 22-04-2016 PGJ_RS05960 d57541c57adf95f85b7479a024a52aa6 97 SUPERFAMILY SSF54928 4 91 1.75E-30 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 PGJ_RS05960 d57541c57adf95f85b7479a024a52aa6 97 Gene3D G3DSA:3.30.70.330 4 92 2.4E-30 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 PGJ_RS05960 d57541c57adf95f85b7479a024a52aa6 97 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 74 3.0E-22 T 22-04-2016 IPR000504 RNA recognition motif domain GO:0003676 PGJ_RS05960 d57541c57adf95f85b7479a024a52aa6 97 SMART SM00360 4 77 5.2E-28 T 22-04-2016 IPR000504 RNA recognition motif domain GO:0003676 PGJ_RS02015 64f5ba89dc82b3e8445a635647af8f92 511 Gene3D G3DSA:3.30.565.10 30 207 1.4E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS02015 64f5ba89dc82b3e8445a635647af8f92 511 SUPERFAMILY SSF55874 13 185 2.11E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PGJ_RS02015 64f5ba89dc82b3e8445a635647af8f92 511 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 153 1.3E-14 T 22-04-2016 PGJ_RS05780 cae034bc41525b962d011ad9e313ecef 362 Gene3D G3DSA:3.90.1200.10 179 338 1.4E-23 T 22-04-2016 PGJ_RS05780 cae034bc41525b962d011ad9e313ecef 362 Pfam PF01636 Phosphotransferase enzyme family 20 268 1.0E-24 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase PGJ_RS05780 cae034bc41525b962d011ad9e313ecef 362 SUPERFAMILY SSF56112 3 347 4.62E-34 T 22-04-2016 IPR011009 Protein kinase-like domain PGJ_RS06075 61110a54b2a08c22570a38e6e9eeb589 179 SUPERFAMILY SSF55653 60 147 8.63E-23 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal PGJ_RS06075 61110a54b2a08c22570a38e6e9eeb589 179 Gene3D G3DSA:3.40.5.10 1 49 1.8E-23 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal PGJ_RS06075 61110a54b2a08c22570a38e6e9eeb589 179 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 8.2E-36 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06075 61110a54b2a08c22570a38e6e9eeb589 179 Gene3D G3DSA:3.10.430.100 61 147 2.6E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal PGJ_RS06075 61110a54b2a08c22570a38e6e9eeb589 179 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 23.442 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06075 61110a54b2a08c22570a38e6e9eeb589 179 SUPERFAMILY SSF55658 1 56 7.67E-17 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PGJ_RS06075 61110a54b2a08c22570a38e6e9eeb589 179 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 145 7.9E-24 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal PGJ_RS06075 61110a54b2a08c22570a38e6e9eeb589 179 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 4.6E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal PGJ_RS06075 61110a54b2a08c22570a38e6e9eeb589 179 PANTHER PTHR21368 1 163 1.9E-42 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS05950 6035b15fe26668ff73faadac935f5faf 288 Gene3D G3DSA:2.60.200.30 147 247 7.7E-38 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PGJ_RS05950 6035b15fe26668ff73faadac935f5faf 288 SUPERFAMILY SSF111331 3 284 2.35E-77 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain PGJ_RS05950 6035b15fe26668ff73faadac935f5faf 288 PANTHER PTHR20275 57 285 8.6E-74 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PGJ_RS05950 6035b15fe26668ff73faadac935f5faf 288 Hamap MF_00361 NAD kinase [nadK]. 2 283 30.767 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PGJ_RS05950 6035b15fe26668ff73faadac935f5faf 288 Gene3D G3DSA:3.40.50.10330 1 146 1.6E-32 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PGJ_RS05950 6035b15fe26668ff73faadac935f5faf 288 Pfam PF01513 ATP-NAD kinase 58 247 4.8E-51 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PGJ_RS03110 5320d49cd5ecd6956841df591ed4f649 377 PANTHER PTHR10996:SF111 41 339 5.1E-90 T 22-04-2016 PGJ_RS03110 5320d49cd5ecd6956841df591ed4f649 377 SUPERFAMILY SSF52283 25 114 1.32E-17 T 22-04-2016 PGJ_RS03110 5320d49cd5ecd6956841df591ed4f649 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 265 1.9E-31 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PGJ_RS03110 5320d49cd5ecd6956841df591ed4f649 377 PANTHER PTHR10996 41 339 5.1E-90 T 22-04-2016 PGJ_RS03110 5320d49cd5ecd6956841df591ed4f649 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 9 362 39.717 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 PGJ_RS03110 5320d49cd5ecd6956841df591ed4f649 377 SUPERFAMILY SSF51735 99 266 3.14E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03110 5320d49cd5ecd6956841df591ed4f649 377 Gene3D G3DSA:3.40.50.720 42 125 3.5E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03110 5320d49cd5ecd6956841df591ed4f649 377 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 127 154 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PGJ_RS03110 5320d49cd5ecd6956841df591ed4f649 377 Gene3D G3DSA:3.40.50.720 126 267 1.9E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03110 5320d49cd5ecd6956841df591ed4f649 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 42 287 1.6E-15 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PGJ_RS05720 72aeddc5c1b459987f0539a2b1571ac3 281 SUPERFAMILY SSF57783 6 79 1.45E-15 T 22-04-2016 PGJ_RS05720 72aeddc5c1b459987f0539a2b1571ac3 281 Gene3D G3DSA:3.40.1360.10 185 279 3.8E-15 T 22-04-2016 PGJ_RS05720 72aeddc5c1b459987f0539a2b1571ac3 281 Pfam PF01807 CHC2 zinc finger 24 67 3.7E-6 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PGJ_RS05720 72aeddc5c1b459987f0539a2b1571ac3 281 SUPERFAMILY SSF56731 187 276 7.72E-5 T 22-04-2016 PGJ_RS05720 72aeddc5c1b459987f0539a2b1571ac3 281 Pfam PF13155 Toprim-like 191 275 1.8E-13 T 22-04-2016 PGJ_RS05720 72aeddc5c1b459987f0539a2b1571ac3 281 Gene3D G3DSA:3.90.580.10 5 74 2.4E-16 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PGJ_RS03600 282f374c2f33259432aaad5337b1c39d 367 PANTHER PTHR10681 227 345 2.9E-21 T 22-04-2016 PGJ_RS03600 282f374c2f33259432aaad5337b1c39d 367 SUPERFAMILY SSF52833 227 349 3.31E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS03600 282f374c2f33259432aaad5337b1c39d 367 Pfam PF14289 Domain of unknown function (DUF4369) 17 113 7.5E-16 T 22-04-2016 IPR025380 Domain of unknown function DUF4369 PGJ_RS03600 282f374c2f33259432aaad5337b1c39d 367 ProSitePatterns PS00194 Thioredoxin family active site. 258 276 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PGJ_RS03600 282f374c2f33259432aaad5337b1c39d 367 Pfam PF00578 AhpC/TSA family 229 346 1.8E-23 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PGJ_RS03600 282f374c2f33259432aaad5337b1c39d 367 Gene3D G3DSA:3.40.30.10 3 26 5.2E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS03600 282f374c2f33259432aaad5337b1c39d 367 Gene3D G3DSA:3.40.30.10 225 364 5.2E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS07680 d5ee777bb21c30a74b4af7d622a17be8 105 SUPERFAMILY SSF117916 7 103 1.34E-32 T 22-04-2016 PGJ_RS07680 d5ee777bb21c30a74b4af7d622a17be8 105 PANTHER PTHR13696 7 102 1.8E-23 T 22-04-2016 PGJ_RS07680 d5ee777bb21c30a74b4af7d622a17be8 105 PANTHER PTHR13696:SF62 7 102 1.8E-23 T 22-04-2016 PGJ_RS07680 d5ee777bb21c30a74b4af7d622a17be8 105 Pfam PF01883 Domain of unknown function DUF59 9 81 6.2E-21 T 22-04-2016 IPR002744 Domain of unknown function DUF59 PGJ_RS04645 dadcac04c5853e1f5896001ce57b1e6d 82 Pfam PF14899 Domain of unknown function (DUF4492) 14 76 1.2E-30 T 22-04-2016 IPR027853 Protein of unknown function DUF4492 PGJ_RS07995 5ada1c06eec9ce7a1e610a705ea7130c 211 Pfam PF01609 Transposase DDE domain 153 198 8.0E-11 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS07995 5ada1c06eec9ce7a1e610a705ea7130c 211 PANTHER PTHR35604 12 163 5.5E-20 T 22-04-2016 PGJ_RS07995 5ada1c06eec9ce7a1e610a705ea7130c 211 Pfam PF05598 Transposase domain (DUF772) 59 133 4.5E-22 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 79 361 3.2E-79 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 SMART SM00228 105 177 4.7E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 SMART SM00245 179 367 6.6E-58 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 Pfam PF13180 PDZ domain 108 181 4.1E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 Gene3D G3DSA:3.30.750.44 67 111 1.1E-4 T 22-04-2016 PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 Gene3D G3DSA:3.90.226.10 531 554 5.3E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 Gene3D G3DSA:3.90.226.10 395 407 5.3E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 Gene3D G3DSA:3.90.226.10 188 360 5.3E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 SUPERFAMILY SSF50156 95 188 1.4E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 SUPERFAMILY SSF52096 40 123 2.32E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 SUPERFAMILY SSF52096 199 362 2.32E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 Gene3D G3DSA:2.30.42.10 112 187 8.7E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 PANTHER PTHR32060 58 362 6.4E-93 T 22-04-2016 PGJ_RS03480 e7ef917d701d2e0b17beb65f441ee5e9 569 Pfam PF03572 Peptidase family S41 206 361 2.2E-49 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PGJ_RS07205 90b71f10c4857c4f5876640933cce3c5 485 SUPERFAMILY SSF52058 117 362 2.01E-33 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PGJ_RS07205 90b71f10c4857c4f5876640933cce3c5 485 Gene3D G3DSA:3.80.10.10 119 354 1.6E-39 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PGJ_RS07205 90b71f10c4857c4f5876640933cce3c5 485 PANTHER PTHR24365 148 362 1.5E-15 T 22-04-2016 PGJ_RS08335 703b903200ed431b9811c7e115759538 106 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08335 703b903200ed431b9811c7e115759538 106 Gene3D G3DSA:2.30.30.30 2 93 9.0E-29 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 PGJ_RS08335 703b903200ed431b9811c7e115759538 106 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 99 21.911 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08335 703b903200ed431b9811c7e115759538 106 SUPERFAMILY SSF50104 2 103 6.02E-38 T 22-04-2016 IPR008991 Translation protein SH3-like domain PGJ_RS08335 703b903200ed431b9811c7e115759538 106 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 105 1.4E-39 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08335 703b903200ed431b9811c7e115759538 106 PANTHER PTHR12903 1 105 4.5E-48 T 22-04-2016 PGJ_RS08335 703b903200ed431b9811c7e115759538 106 SMART SM00739 5 32 7.8E-7 T 22-04-2016 IPR005824 KOW PGJ_RS08335 703b903200ed431b9811c7e115759538 106 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 105 1.1E-29 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08335 703b903200ed431b9811c7e115759538 106 Pfam PF00467 KOW motif 8 39 3.6E-7 T 22-04-2016 IPR005824 KOW PGJ_RS04010 4a29780b2e2e7457e8f680c0401b29a8 477 Pfam PF00648 Calpain family cysteine protease 305 471 2.9E-11 T 22-04-2016 IPR001300 Peptidase C2, calpain, catalytic domain GO:0004198|GO:0005622|GO:0006508 PGJ_RS04010 4a29780b2e2e7457e8f680c0401b29a8 477 SMART SM00230 154 477 0.0018 T 22-04-2016 IPR001300 Peptidase C2, calpain, catalytic domain GO:0004198|GO:0005622|GO:0006508 PGJ_RS04010 4a29780b2e2e7457e8f680c0401b29a8 477 Gene3D G3DSA:3.90.70.10 391 455 8.1E-10 T 22-04-2016 PGJ_RS04010 4a29780b2e2e7457e8f680c0401b29a8 477 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 223 234 - T 22-04-2016 IPR000169 Cysteine peptidase, cysteine active site PGJ_RS04010 4a29780b2e2e7457e8f680c0401b29a8 477 SUPERFAMILY SSF54001 149 475 1.01E-41 T 22-04-2016 PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 SUPERFAMILY SSF52218 1 162 5.32E-43 T 22-04-2016 IPR029039 Flavoprotein-like domain PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 PANTHER PTHR19384 1 120 1.0E-38 T 22-04-2016 PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 PANTHER PTHR19384 140 160 1.0E-38 T 22-04-2016 PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 PRINTS PR00369 Flavodoxin signature 51 62 1.7E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 PRINTS PR00369 Flavodoxin signature 80 90 1.7E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 PRINTS PR00369 Flavodoxin signature 5 18 1.7E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 PIRSF PIRSF038996 1 164 1.7E-55 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 Gene3D G3DSA:3.40.50.360 1 162 6.2E-52 T 22-04-2016 IPR029039 Flavoprotein-like domain PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 PANTHER PTHR19384:SF73 1 120 1.0E-38 T 22-04-2016 PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 PANTHER PTHR19384:SF73 140 160 1.0E-38 T 22-04-2016 PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 Pfam PF00258 Flavodoxin 6 159 1.6E-25 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PGJ_RS08060 77512cf2a3d7f566836e507507a8ec55 165 TIGRFAM TIGR01752 flav_long: flavodoxin 3 161 5.2E-54 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 PGJ_RS03990 6e92e3155725799a28827792d9a173b7 157 Pfam PF03061 Thioesterase superfamily 58 144 2.7E-7 T 22-04-2016 IPR006683 Thioesterase domain PGJ_RS03990 6e92e3155725799a28827792d9a173b7 157 SUPERFAMILY SSF54637 4 149 6.68E-30 T 22-04-2016 IPR029069 HotDog domain PGJ_RS03990 6e92e3155725799a28827792d9a173b7 157 PANTHER PTHR12418:SF16 50 151 2.2E-14 T 22-04-2016 PGJ_RS03990 6e92e3155725799a28827792d9a173b7 157 Gene3D G3DSA:3.10.129.10 2 156 7.6E-50 T 22-04-2016 IPR029069 HotDog domain PGJ_RS03990 6e92e3155725799a28827792d9a173b7 157 PANTHER PTHR12418 50 151 2.2E-14 T 22-04-2016 PGJ_RS01305 21c34bdc1323ede273e9557e6e885e75 287 Pfam PF13509 S1 domain 8 66 1.2E-19 T 22-04-2016 PGJ_RS01305 21c34bdc1323ede273e9557e6e885e75 287 PIRSF PIRSF012524 4 280 5.4E-64 T 22-04-2016 IPR014464 Conserved virulence factor B PGJ_RS01305 21c34bdc1323ede273e9557e6e885e75 287 PANTHER PTHR37296 5 282 7.5E-82 T 22-04-2016 PGJ_RS03055 713996f9bb78e558242b7e7e5ec66a86 318 Gene3D G3DSA:3.90.25.10 216 316 3.5E-5 T 22-04-2016 PGJ_RS03055 713996f9bb78e558242b7e7e5ec66a86 318 SUPERFAMILY SSF51735 1 316 8.95E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03055 713996f9bb78e558242b7e7e5ec66a86 318 PANTHER PTHR10366:SF12 3 316 2.0E-103 T 22-04-2016 PGJ_RS03055 713996f9bb78e558242b7e7e5ec66a86 318 PANTHER PTHR10366 3 316 2.0E-103 T 22-04-2016 PGJ_RS03055 713996f9bb78e558242b7e7e5ec66a86 318 Gene3D G3DSA:3.40.50.720 1 215 4.6E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03055 713996f9bb78e558242b7e7e5ec66a86 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 242 1.0E-21 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PGJ_RS03755 40fb4faf6fafddbee00b03f5b2638ead 187 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 12 184 5.0E-99 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PGJ_RS03755 40fb4faf6fafddbee00b03f5b2638ead 187 Gene3D G3DSA:1.20.1200.10 15 184 1.4E-60 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PGJ_RS03755 40fb4faf6fafddbee00b03f5b2638ead 187 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 7 182 5.6E-57 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PGJ_RS03755 40fb4faf6fafddbee00b03f5b2638ead 187 PANTHER PTHR12213 1 184 2.5E-74 T 22-04-2016 PGJ_RS03755 40fb4faf6fafddbee00b03f5b2638ead 187 Pfam PF01923 Cobalamin adenosyltransferase 6 170 4.3E-60 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PGJ_RS03755 40fb4faf6fafddbee00b03f5b2638ead 187 PANTHER PTHR12213:SF0 1 184 2.5E-74 T 22-04-2016 PGJ_RS03755 40fb4faf6fafddbee00b03f5b2638ead 187 SUPERFAMILY SSF89028 5 183 4.9E-60 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PGJ_RS05270 71a556213f58218784c7c260dab119fa 388 PANTHER PTHR30068 1 384 7.4E-116 T 22-04-2016 PGJ_RS05270 71a556213f58218784c7c260dab119fa 388 Pfam PF01553 Acyltransferase 84 215 7.0E-7 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PGJ_RS05270 71a556213f58218784c7c260dab119fa 388 SUPERFAMILY SSF69593 83 183 7.72E-5 T 22-04-2016 PGJ_RS05270 71a556213f58218784c7c260dab119fa 388 PANTHER PTHR30068:SF3 1 384 7.4E-116 T 22-04-2016 PGJ_RS08795 5ecb581b5138f18e474af6fae94c2d8c 508 Gene3D G3DSA:3.40.30.10 471 494 1.6E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS08795 5ecb581b5138f18e474af6fae94c2d8c 508 Gene3D G3DSA:3.40.30.10 387 423 1.6E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS08795 5ecb581b5138f18e474af6fae94c2d8c 508 SUPERFAMILY SSF52833 376 505 1.46E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS09460 c82e2697e670b4c523215b368f0a7041 587 PANTHER PTHR30557:SF1 121 151 0.0 T 22-04-2016 PGJ_RS09460 c82e2697e670b4c523215b368f0a7041 587 PANTHER PTHR30557:SF1 177 582 0.0 T 22-04-2016 PGJ_RS09460 c82e2697e670b4c523215b368f0a7041 587 PANTHER PTHR30557:SF1 10 87 0.0 T 22-04-2016 PGJ_RS09460 c82e2697e670b4c523215b368f0a7041 587 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 129 577 4.4E-201 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PGJ_RS09460 c82e2697e670b4c523215b368f0a7041 587 Pfam PF01964 Radical SAM ThiC family 129 574 3.0E-194 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PGJ_RS09460 c82e2697e670b4c523215b368f0a7041 587 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 128 580 55.048 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PGJ_RS09460 c82e2697e670b4c523215b368f0a7041 587 PANTHER PTHR30557 121 151 0.0 T 22-04-2016 PGJ_RS09460 c82e2697e670b4c523215b368f0a7041 587 PANTHER PTHR30557 177 582 0.0 T 22-04-2016 PGJ_RS09460 c82e2697e670b4c523215b368f0a7041 587 PANTHER PTHR30557 10 87 0.0 T 22-04-2016 PGJ_RS09460 c82e2697e670b4c523215b368f0a7041 587 Pfam PF13667 ThiC-associated domain 10 88 5.9E-30 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PGJ_RS00155 e1b707a922094a7172161cf8cc8001d1 104 PIRSF PIRSF000077 1 104 3.9E-37 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PGJ_RS00155 e1b707a922094a7172161cf8cc8001d1 104 SUPERFAMILY SSF52833 4 103 4.8E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS00155 e1b707a922094a7172161cf8cc8001d1 104 PANTHER PTHR10438 1 103 4.1E-38 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PGJ_RS00155 e1b707a922094a7172161cf8cc8001d1 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PGJ_RS00155 e1b707a922094a7172161cf8cc8001d1 104 Pfam PF00085 Thioredoxin 4 101 9.4E-31 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 PGJ_RS00155 e1b707a922094a7172161cf8cc8001d1 104 Gene3D G3DSA:3.40.30.10 4 103 1.1E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS00155 e1b707a922094a7172161cf8cc8001d1 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 102 3.9E-35 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PGJ_RS00155 e1b707a922094a7172161cf8cc8001d1 104 PRINTS PR00421 Thioredoxin family signature 20 28 3.8E-8 T 22-04-2016 PGJ_RS00155 e1b707a922094a7172161cf8cc8001d1 104 PRINTS PR00421 Thioredoxin family signature 28 37 3.8E-8 T 22-04-2016 PGJ_RS00155 e1b707a922094a7172161cf8cc8001d1 104 PRINTS PR00421 Thioredoxin family signature 68 79 3.8E-8 T 22-04-2016 PGJ_RS06325 83d78c052825926a22064b0ed3faf7ba 827 Pfam PF00593 TonB dependent receptor 546 823 8.8E-13 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS06325 83d78c052825926a22064b0ed3faf7ba 827 SUPERFAMILY SSF56935 142 823 1.68E-50 T 22-04-2016 PGJ_RS06325 83d78c052825926a22064b0ed3faf7ba 827 Gene3D G3DSA:2.170.130.10 125 247 1.1E-5 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS06325 83d78c052825926a22064b0ed3faf7ba 827 Pfam PF07715 TonB-dependent Receptor Plug Domain 140 232 3.7E-8 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS06325 83d78c052825926a22064b0ed3faf7ba 827 PANTHER PTHR30069 1 248 3.7E-18 T 22-04-2016 PGJ_RS06325 83d78c052825926a22064b0ed3faf7ba 827 Pfam PF13715 CarboxypepD_reg-like domain 41 127 9.1E-15 T 22-04-2016 PGJ_RS06325 83d78c052825926a22064b0ed3faf7ba 827 Gene3D G3DSA:2.60.40.1120 40 124 1.2E-10 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS06325 83d78c052825926a22064b0ed3faf7ba 827 SUPERFAMILY SSF49464 39 124 3.14E-14 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS06690 53f7ce64a3af1b0af4cfde838a930aeb 290 Pfam PF11738 Protein of unknown function (DUF3298) 187 265 1.1E-13 T 22-04-2016 IPR021729 Domain of unknown function DUF3298 PGJ_RS06690 53f7ce64a3af1b0af4cfde838a930aeb 290 Gene3D G3DSA:3.30.565.40 36 184 1.2E-15 T 22-04-2016 IPR025303 Domain of unknown function DUF4163 PGJ_RS06690 53f7ce64a3af1b0af4cfde838a930aeb 290 Gene3D G3DSA:3.90.640.20 187 280 1.3E-17 T 22-04-2016 IPR021729 Domain of unknown function DUF3298 PGJ_RS09130 384e7c1c0e1d6fa70ad2f23baa4eafb8 505 Pfam PF08534 Redoxin 382 489 5.3E-10 T 22-04-2016 IPR013740 Redoxin GO:0016491 PGJ_RS09130 384e7c1c0e1d6fa70ad2f23baa4eafb8 505 Gene3D G3DSA:3.40.30.10 2 30 2.0E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS09130 384e7c1c0e1d6fa70ad2f23baa4eafb8 505 Gene3D G3DSA:3.40.30.10 367 503 2.0E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS09130 384e7c1c0e1d6fa70ad2f23baa4eafb8 505 SUPERFAMILY SSF52833 382 503 1.42E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 Pfam PF09190 DALR domain 372 430 7.1E-10 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 Gene3D G3DSA:3.40.50.620 22 330 2.0E-95 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 SUPERFAMILY SSF47323 359 489 3.27E-29 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 PANTHER PTHR10890 5 489 5.5E-187 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 64 73 2.4E-25 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 208 226 2.4E-25 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 239 260 2.4E-25 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 28 39 2.4E-25 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 SMART SM00840 370 442 4.3E-12 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 Gene3D G3DSA:1.20.120.640 332 426 2.8E-17 T 22-04-2016 PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 SUPERFAMILY SSF52374 6 338 3.75E-82 T 22-04-2016 PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 338 2.2E-104 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 5 488 7.9E-138 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 PGJ_RS08125 993096e02e333e888b87a26d769b1037 490 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 5 490 35.877 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 PGJ_RS02265 c8b7fa1837b155e99b89cc10b09eac70 313 Gene3D G3DSA:3.20.20.70 3 295 9.9E-66 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS02265 c8b7fa1837b155e99b89cc10b09eac70 313 PANTHER PTHR32332 1 307 9.5E-122 T 22-04-2016 PGJ_RS02265 c8b7fa1837b155e99b89cc10b09eac70 313 Pfam PF03060 Nitronate monooxygenase 4 75 1.2E-19 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PGJ_RS02265 c8b7fa1837b155e99b89cc10b09eac70 313 Pfam PF03060 Nitronate monooxygenase 80 300 8.4E-43 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PGJ_RS02265 c8b7fa1837b155e99b89cc10b09eac70 313 SUPERFAMILY SSF51412 2 279 1.53E-67 T 22-04-2016 PGJ_RS02265 c8b7fa1837b155e99b89cc10b09eac70 313 PANTHER PTHR32332:SF20 1 307 9.5E-122 T 22-04-2016 PGJ_RS02645 d687e97de0fcbca91c9566db27d5d439 369 Pfam PF07675 Cleaved Adhesin Domain 58 225 2.3E-80 T 22-04-2016 IPR011628 Cleaved adhesin PGJ_RS06725 69ebe0297080722540f97ffb74014180 424 Pfam PF13194 Domain of unknown function (DUF4010) 186 393 5.5E-51 T 22-04-2016 IPR025105 Domain of unknown function DUF4010 PGJ_RS06725 69ebe0297080722540f97ffb74014180 424 PANTHER PTHR39084 10 423 3.8E-44 T 22-04-2016 PGJ_RS01795 33128267352f001fe9c91fa19a92e47e 517 Gene3D G3DSA:3.90.226.10 256 517 6.6E-101 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS01795 33128267352f001fe9c91fa19a92e47e 517 Pfam PF01039 Carboxyl transferase domain 30 514 2.3E-199 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PGJ_RS01795 33128267352f001fe9c91fa19a92e47e 517 PANTHER PTHR22855 6 517 0.0 T 22-04-2016 PGJ_RS01795 33128267352f001fe9c91fa19a92e47e 517 SUPERFAMILY SSF52096 7 257 1.06E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS01795 33128267352f001fe9c91fa19a92e47e 517 PANTHER PTHR22855:SF14 6 517 0.0 T 22-04-2016 PGJ_RS01795 33128267352f001fe9c91fa19a92e47e 517 Gene3D G3DSA:3.90.226.10 2 255 1.2E-84 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS01795 33128267352f001fe9c91fa19a92e47e 517 SUPERFAMILY SSF52096 255 517 1.06E-89 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS02120 32a53f247e7a6e776d9cf486aa1ae3e6 789 ProDom PD004169 PRECURSOR CYSTEINE STREPTOCOCCAL STREPTOPAIN PROTEINASE PROTEASE THIOL B STREPTOCOCCUS EXOTOXIN 105 334 3.0E-136 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02120 32a53f247e7a6e776d9cf486aa1ae3e6 789 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 257 281 6.0E-46 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02120 32a53f247e7a6e776d9cf486aa1ae3e6 789 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 196 212 6.0E-46 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02120 32a53f247e7a6e776d9cf486aa1ae3e6 789 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 224 243 6.0E-46 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02120 32a53f247e7a6e776d9cf486aa1ae3e6 789 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 311 332 6.0E-46 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02120 32a53f247e7a6e776d9cf486aa1ae3e6 789 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 289 310 6.0E-46 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02120 32a53f247e7a6e776d9cf486aa1ae3e6 789 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 126 150 6.0E-46 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02120 32a53f247e7a6e776d9cf486aa1ae3e6 789 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 721 781 1.2E-9 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS02120 32a53f247e7a6e776d9cf486aa1ae3e6 789 Pfam PF01640 Peptidase C10 family 110 303 6.5E-53 T 22-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 PGJ_RS02120 32a53f247e7a6e776d9cf486aa1ae3e6 789 SUPERFAMILY SSF54001 2 334 1.57E-96 T 22-04-2016 PGJ_RS02120 32a53f247e7a6e776d9cf486aa1ae3e6 789 Pfam PF13734 Spi protease inhibitor 7 66 6.3E-17 T 22-04-2016 IPR025896 Spi protease inhibitor PGJ_RS00605 0c39bf87cfbab92721a25b495edc2907 436 SUPERFAMILY SSF53756 130 428 7.85E-8 T 22-04-2016 PGJ_RS03865 46a9d57fe2cea83b7ded33cbcc3d1a2e 608 Gene3D G3DSA:2.30.38.10 401 465 5.2E-19 T 22-04-2016 PGJ_RS03865 46a9d57fe2cea83b7ded33cbcc3d1a2e 608 PANTHER PTHR24096 9 607 5.6E-176 T 22-04-2016 PGJ_RS03865 46a9d57fe2cea83b7ded33cbcc3d1a2e 608 Pfam PF00501 AMP-binding enzyme 14 475 1.2E-82 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PGJ_RS03865 46a9d57fe2cea83b7ded33cbcc3d1a2e 608 Gene3D G3DSA:3.40.50.980 193 286 1.4E-23 T 22-04-2016 PGJ_RS03865 46a9d57fe2cea83b7ded33cbcc3d1a2e 608 Gene3D G3DSA:3.40.50.980 341 397 1.4E-23 T 22-04-2016 PGJ_RS03865 46a9d57fe2cea83b7ded33cbcc3d1a2e 608 PANTHER PTHR24096:SF193 9 607 5.6E-176 T 22-04-2016 PGJ_RS03865 46a9d57fe2cea83b7ded33cbcc3d1a2e 608 SUPERFAMILY SSF56801 344 607 1.57E-104 T 22-04-2016 PGJ_RS03865 46a9d57fe2cea83b7ded33cbcc3d1a2e 608 SUPERFAMILY SSF56801 8 291 1.57E-104 T 22-04-2016 PGJ_RS03865 46a9d57fe2cea83b7ded33cbcc3d1a2e 608 Gene3D G3DSA:3.40.50.980 11 192 1.9E-28 T 22-04-2016 PGJ_RS03865 46a9d57fe2cea83b7ded33cbcc3d1a2e 608 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 22-04-2016 IPR020845 AMP-binding, conserved site PGJ_RS03745 b913d675cbcc20e419cce897d1a096e6 439 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 302 316 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PGJ_RS03745 b913d675cbcc20e419cce897d1a096e6 439 SUPERFAMILY SSF55120 260 431 1.34E-40 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS03745 b913d675cbcc20e419cce897d1a096e6 439 SMART SM00363 204 265 1.9E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS03745 b913d675cbcc20e419cce897d1a096e6 439 PANTHER PTHR21600:SF2 201 434 3.7E-111 T 22-04-2016 PGJ_RS03745 b913d675cbcc20e419cce897d1a096e6 439 Pfam PF01479 S4 domain 205 250 2.9E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS03745 b913d675cbcc20e419cce897d1a096e6 439 Gene3D G3DSA:3.10.290.10 202 266 2.4E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS03745 b913d675cbcc20e419cce897d1a096e6 439 PANTHER PTHR21600 201 434 3.7E-111 T 22-04-2016 PGJ_RS03745 b913d675cbcc20e419cce897d1a096e6 439 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 268 426 5.2E-45 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PGJ_RS03745 b913d675cbcc20e419cce897d1a096e6 439 SUPERFAMILY SSF55174 204 290 3.53E-16 T 22-04-2016 PGJ_RS03745 b913d675cbcc20e419cce897d1a096e6 439 Pfam PF00849 RNA pseudouridylate synthase 264 396 2.2E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS05325 a59109024aa29d9d06798fee0b0dbd0a 115 SUPERFAMILY SSF55785 4 93 6.09E-7 T 22-04-2016 IPR000014 PAS domain PGJ_RS05325 a59109024aa29d9d06798fee0b0dbd0a 115 Gene3D G3DSA:3.30.450.20 4 95 2.4E-11 T 22-04-2016 PGJ_RS05325 a59109024aa29d9d06798fee0b0dbd0a 115 Pfam PF08448 PAS fold 9 66 6.3E-7 T 22-04-2016 IPR013656 PAS fold-4 PGJ_RS04600 d3aead2f1a389eaa3a9fe09b67ade242 163 SMART SM00987 10 161 5.3E-11 T 22-04-2016 PGJ_RS04600 d3aead2f1a389eaa3a9fe09b67ade242 163 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 8 157 6.7E-50 T 22-04-2016 IPR026353 Hypoxanthine-DNA glycosylase PGJ_RS04600 d3aead2f1a389eaa3a9fe09b67ade242 163 SMART SM00986 10 161 5.3E-11 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PGJ_RS04600 d3aead2f1a389eaa3a9fe09b67ade242 163 Gene3D G3DSA:3.40.470.10 9 161 3.1E-33 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PGJ_RS04600 d3aead2f1a389eaa3a9fe09b67ade242 163 SUPERFAMILY SSF52141 9 161 5.49E-36 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PGJ_RS04600 d3aead2f1a389eaa3a9fe09b67ade242 163 Pfam PF03167 Uracil DNA glycosylase superfamily 14 158 1.8E-13 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like PGJ_RS04880 8d04ee8f519a1fa80ea2fe6286ef8be5 157 Pfam PF08989 Domain of unknown function (DUF1896) 4 147 1.7E-58 T 22-04-2016 IPR015082 Protein of unknown function DUF1896 PGJ_RS04880 8d04ee8f519a1fa80ea2fe6286ef8be5 157 Gene3D G3DSA:1.10.8.340 70 155 1.4E-40 T 22-04-2016 PGJ_RS04880 8d04ee8f519a1fa80ea2fe6286ef8be5 157 SUPERFAMILY SSF140753 2 149 8.11E-62 T 22-04-2016 PGJ_RS04880 8d04ee8f519a1fa80ea2fe6286ef8be5 157 Gene3D G3DSA:1.10.8.330 1 69 1.9E-30 T 22-04-2016 PGJ_RS07650 766f6a9f2639aeabe8ae67d861efba8c 340 SUPERFAMILY SSF46589 17 78 5.23E-12 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 PGJ_RS07650 766f6a9f2639aeabe8ae67d861efba8c 340 PANTHER PTHR11538 93 337 4.7E-94 T 22-04-2016 PGJ_RS07650 766f6a9f2639aeabe8ae67d861efba8c 340 Gene3D G3DSA:3.30.930.10 17 337 2.1E-111 T 22-04-2016 PGJ_RS07650 766f6a9f2639aeabe8ae67d861efba8c 340 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 5 336 39.774 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 PGJ_RS07650 766f6a9f2639aeabe8ae67d861efba8c 340 SUPERFAMILY SSF55681 89 337 3.51E-71 T 22-04-2016 PGJ_RS07650 766f6a9f2639aeabe8ae67d861efba8c 340 Pfam PF01409 tRNA synthetases class II core domain (F) 90 336 5.4E-91 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 PGJ_RS07650 766f6a9f2639aeabe8ae67d861efba8c 340 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 82 2.4E-16 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PGJ_RS07650 766f6a9f2639aeabe8ae67d861efba8c 340 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 43 337 2.5E-86 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PGJ_RS03310 54ce744eb3ff7c1df5dc5a778ea35cfe 341 Pfam PF13102 Phage integrase SAM-like domain 9 164 9.0E-17 T 22-04-2016 IPR025269 Phage integrase SAM-like domain PGJ_RS03310 54ce744eb3ff7c1df5dc5a778ea35cfe 341 PANTHER PTHR30349 35 341 3.9E-49 T 22-04-2016 PGJ_RS03310 54ce744eb3ff7c1df5dc5a778ea35cfe 341 Gene3D G3DSA:1.10.443.10 211 341 1.6E-12 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS03310 54ce744eb3ff7c1df5dc5a778ea35cfe 341 PANTHER PTHR30349:SF26 35 341 3.9E-49 T 22-04-2016 PGJ_RS03310 54ce744eb3ff7c1df5dc5a778ea35cfe 341 Gene3D G3DSA:1.10.150.130 115 203 1.4E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal PGJ_RS03310 54ce744eb3ff7c1df5dc5a778ea35cfe 341 SUPERFAMILY SSF56349 117 341 1.0E-29 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS07450 cd036afbf0575912919b256c7c2b416d 296 Pfam PF00535 Glycosyl transferase family 2 6 161 3.6E-15 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PGJ_RS07450 cd036afbf0575912919b256c7c2b416d 296 Gene3D G3DSA:3.90.550.10 3 236 2.2E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS07450 cd036afbf0575912919b256c7c2b416d 296 SUPERFAMILY SSF53448 2 249 2.65E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS07450 cd036afbf0575912919b256c7c2b416d 296 PANTHER PTHR22916 3 205 3.2E-25 T 22-04-2016 PGJ_RS08490 18582a4d304549ebc2bd4c85f546d53c 311 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 249 303 3.7E-17 T 22-04-2016 IPR019264 Domain of unknown function DUF2179 PGJ_RS08490 18582a4d304549ebc2bd4c85f546d53c 311 PIRSF PIRSF006483 2 310 1.1E-63 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT PGJ_RS08490 18582a4d304549ebc2bd4c85f546d53c 311 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 15 243 2.2E-40 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT PGJ_RS08490 18582a4d304549ebc2bd4c85f546d53c 311 PANTHER PTHR33545 1 311 1.4E-74 T 22-04-2016 PGJ_RS08490 18582a4d304549ebc2bd4c85f546d53c 311 PANTHER PTHR33545:SF5 1 311 1.4E-74 T 22-04-2016 PGJ_RS00740 a1d2856769e2855c9d5480cfb4553a93 300 SUPERFAMILY SSF53448 2 281 6.53E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS00740 a1d2856769e2855c9d5480cfb4553a93 300 Gene3D G3DSA:3.90.550.10 6 278 8.5E-19 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS07695 f8997638a4d36bfa6c909c8c92a9e1c0 395 PANTHER PTHR13693 28 394 4.0E-176 T 22-04-2016 PGJ_RS07695 f8997638a4d36bfa6c909c8c92a9e1c0 395 Gene3D G3DSA:3.90.1150.10 277 391 3.2E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS07695 f8997638a4d36bfa6c909c8c92a9e1c0 395 Pfam PF00155 Aminotransferase class I and II 44 385 9.6E-62 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PGJ_RS07695 f8997638a4d36bfa6c909c8c92a9e1c0 395 Gene3D G3DSA:3.40.640.10 61 276 1.3E-95 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS07695 f8997638a4d36bfa6c909c8c92a9e1c0 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PGJ_RS07695 f8997638a4d36bfa6c909c8c92a9e1c0 395 SUPERFAMILY SSF53383 8 392 4.08E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS04120 7621410e40d438a322dc1942739e7029 565 Gene3D G3DSA:1.25.40.10 434 539 8.0E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04120 7621410e40d438a322dc1942739e7029 565 Pfam PF13181 Tetratricopeptide repeat 388 420 0.0039 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04120 7621410e40d438a322dc1942739e7029 565 Gene3D G3DSA:1.25.40.10 374 433 4.5E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04120 7621410e40d438a322dc1942739e7029 565 SMART SM00028 451 484 230.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04120 7621410e40d438a322dc1942739e7029 565 SMART SM00028 388 421 0.067 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04120 7621410e40d438a322dc1942739e7029 565 SMART SM00028 507 540 86.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS04120 7621410e40d438a322dc1942739e7029 565 SUPERFAMILY SSF48452 375 538 8.25E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS04120 7621410e40d438a322dc1942739e7029 565 Gene3D G3DSA:3.30.1330.60 178 257 4.0E-5 T 22-04-2016 IPR006665 OmpA-like domain PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 SUPERFAMILY SSF53623 93 309 5.23E-51 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 PANTHER PTHR23135 1 442 1.3E-146 T 22-04-2016 PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 454 32.351 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 Pfam PF01225 Mur ligase family, catalytic domain 4 105 3.3E-20 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 Gene3D G3DSA:3.40.1190.10 95 312 1.9E-61 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 Gene3D G3DSA:3.40.50.720 3 94 7.2E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 SUPERFAMILY SSF51984 1 94 1.29E-23 T 22-04-2016 PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 394 1.2E-22 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 SUPERFAMILY SSF53244 310 450 5.86E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 Gene3D G3DSA:3.90.190.20 313 448 2.4E-39 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 Pfam PF08245 Mur ligase middle domain 112 291 1.6E-23 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 4 444 5.4E-109 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PGJ_RS06140 ac1fcfeeb77a60c59f45297c323bb5ab 456 PANTHER PTHR23135:SF5 1 442 1.3E-146 T 22-04-2016 PGJ_RS03625 7129a1be434410220ddde5fef1f2ebee 347 SUPERFAMILY SSF64182 22 320 9.55E-53 T 22-04-2016 PGJ_RS03625 7129a1be434410220ddde5fef1f2ebee 347 Pfam PF01368 DHH family 23 175 2.2E-14 T 22-04-2016 IPR001667 DDH domain PGJ_RS03625 7129a1be434410220ddde5fef1f2ebee 347 Pfam PF02272 DHHA1 domain 278 329 2.5E-8 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 PGJ_RS03625 7129a1be434410220ddde5fef1f2ebee 347 Gene3D G3DSA:3.90.1640.10 22 214 1.5E-27 T 22-04-2016 PGJ_RS05580 3c4b455352f26c190eb480c1c1a6ba67 464 Pfam PF13351 Protein of unknown function (DUF4099) 127 208 4.6E-26 T 22-04-2016 IPR025343 Protein of unknown function DUF4099 PGJ_RS05580 3c4b455352f26c190eb480c1c1a6ba67 464 Pfam PF13101 Protein of unknown function (DUF3945) 341 378 1.2E-4 T 22-04-2016 IPR025222 Protein of unknown function DUF3945 PGJ_RS05580 3c4b455352f26c190eb480c1c1a6ba67 464 Pfam PF13101 Protein of unknown function (DUF3945) 241 299 8.8E-24 T 22-04-2016 IPR025222 Protein of unknown function DUF3945 PGJ_RS01585 97ca16a043ec462c99f1cf930c210bde 420 Pfam PF02687 FtsX-like permease family 292 410 2.2E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS01585 97ca16a043ec462c99f1cf930c210bde 420 Pfam PF12704 MacB-like periplasmic core domain 23 250 9.2E-29 T 22-04-2016 IPR025857 MacB-like periplasmic core domain PGJ_RS01585 97ca16a043ec462c99f1cf930c210bde 420 PANTHER PTHR30572 6 420 9.3E-75 T 22-04-2016 PGJ_RS00025 0e1927a0d5e7904f8c0bc8b991ab93ba 384 Gene3D G3DSA:3.60.21.10 156 326 3.0E-19 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS00025 0e1927a0d5e7904f8c0bc8b991ab93ba 384 Pfam PF00149 Calcineurin-like phosphoesterase 157 320 4.3E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PGJ_RS00025 0e1927a0d5e7904f8c0bc8b991ab93ba 384 PANTHER PTHR31302 64 380 8.9E-53 T 22-04-2016 PGJ_RS00025 0e1927a0d5e7904f8c0bc8b991ab93ba 384 PANTHER PTHR31302:SF0 64 380 8.9E-53 T 22-04-2016 PGJ_RS00025 0e1927a0d5e7904f8c0bc8b991ab93ba 384 SUPERFAMILY SSF56300 157 375 2.99E-29 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS07380 298b12fdcef272d6d481080068b8bfec 316 Pfam PF00535 Glycosyl transferase family 2 4 167 2.2E-32 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PGJ_RS07380 298b12fdcef272d6d481080068b8bfec 316 SUPERFAMILY SSF53448 2 263 8.81E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS07380 298b12fdcef272d6d481080068b8bfec 316 PANTHER PTHR10859 2 316 2.8E-173 T 22-04-2016 PGJ_RS07380 298b12fdcef272d6d481080068b8bfec 316 PANTHER PTHR10859:SF100 2 316 2.8E-173 T 22-04-2016 PGJ_RS07380 298b12fdcef272d6d481080068b8bfec 316 Gene3D G3DSA:3.90.550.10 2 175 2.6E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS02620 572b893abdbe5fdde80bd83c079d06b5 104 PANTHER PTHR10160 13 97 1.6E-13 T 22-04-2016 PGJ_RS02620 572b893abdbe5fdde80bd83c079d06b5 104 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 97 5.7E-28 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 PGJ_RS00760 2a95b567bf87528d1b6a516d1d072ef9 145 PIRSF PIRSF016821 1 127 3.4E-54 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 PGJ_RS00760 2a95b567bf87528d1b6a516d1d072ef9 145 SMART SM00363 4 68 1.6E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS00760 2a95b567bf87528d1b6a516d1d072ef9 145 SUPERFAMILY SSF55174 2 100 1.23E-23 T 22-04-2016 PGJ_RS00760 2a95b567bf87528d1b6a516d1d072ef9 145 Pfam PF01479 S4 domain 4 50 1.8E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS00760 2a95b567bf87528d1b6a516d1d072ef9 145 Gene3D G3DSA:3.10.290.10 1 86 7.1E-26 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PGJ_RS05870 9c8e210e4de2b7c26f99684e27c68f42 333 SMART SM00382 35 225 1.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS05870 9c8e210e4de2b7c26f99684e27c68f42 333 PANTHER PTHR24220 8 245 1.5E-74 T 22-04-2016 PGJ_RS05870 9c8e210e4de2b7c26f99684e27c68f42 333 Gene3D G3DSA:3.40.50.300 6 237 1.8E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05870 9c8e210e4de2b7c26f99684e27c68f42 333 Pfam PF00005 ABC transporter 29 175 1.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS05870 9c8e210e4de2b7c26f99684e27c68f42 333 SUPERFAMILY SSF52540 9 235 2.71E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05870 9c8e210e4de2b7c26f99684e27c68f42 333 PANTHER PTHR24220:SF73 8 245 1.5E-74 T 22-04-2016 PGJ_RS01130 060103d66f0decf9b0dc6d40052713e4 110 Pfam PF01253 Translation initiation factor SUI1 36 104 2.1E-14 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 PGJ_RS01130 060103d66f0decf9b0dc6d40052713e4 110 Gene3D G3DSA:3.30.780.10 35 110 8.0E-25 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 PGJ_RS01130 060103d66f0decf9b0dc6d40052713e4 110 SUPERFAMILY SSF55159 35 110 6.02E-19 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 PGJ_RS01130 060103d66f0decf9b0dc6d40052713e4 110 PIRSF PIRSF037511 1 110 7.3E-29 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 PGJ_RS00170 8e16a8f4916a4949a69196b9e8b31e19 84 Pfam PF13701 Transposase DDE domain group 1 1 64 4.8E-7 T 22-04-2016 IPR025668 Transposase DDE domain PGJ_RS00230 c3d5463c0be1c44a5e79d92cb5708607 351 Pfam PF04024 PspC domain 123 183 1.9E-16 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal PGJ_RS04855 509cfd2595f4b8c27e333e62d4a7453d 260 Pfam PF14337 Domain of unknown function (DUF4393) 67 258 2.9E-50 T 22-04-2016 IPR025506 Protein of unknown function DUF4393 PGJ_RS07595 f49a3cbaf4e748e62944f5f80c4ec6d1 141 Pfam PF00583 Acetyltransferase (GNAT) family 34 120 2.8E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 PGJ_RS07595 f49a3cbaf4e748e62944f5f80c4ec6d1 141 Gene3D G3DSA:3.40.630.30 3 141 1.9E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS07595 f49a3cbaf4e748e62944f5f80c4ec6d1 141 SUPERFAMILY SSF55729 9 139 3.19E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS00250 f9bd6f1542bb8be1138d19f58a3976c9 127 SUPERFAMILY SSF54913 6 75 7.78E-7 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PGJ_RS00250 f9bd6f1542bb8be1138d19f58a3976c9 127 Pfam PF09413 Putative prokaryotic signal transducing protein 6 70 4.7E-10 T 22-04-2016 IPR018551 Domain of unknown function DUF2007 PGJ_RS09335 4e1983199bdbd2eabe0df39707c85d57 510 Pfam PF00854 POT family 76 258 3.4E-20 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS09335 4e1983199bdbd2eabe0df39707c85d57 510 Pfam PF00854 POT family 278 469 9.9E-27 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS09335 4e1983199bdbd2eabe0df39707c85d57 510 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 148 160 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS09335 4e1983199bdbd2eabe0df39707c85d57 510 SUPERFAMILY SSF103473 231 507 7.59E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain PGJ_RS09335 4e1983199bdbd2eabe0df39707c85d57 510 SUPERFAMILY SSF103473 3 170 7.59E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain PGJ_RS09335 4e1983199bdbd2eabe0df39707c85d57 510 PANTHER PTHR11654:SF119 234 467 1.4E-116 T 22-04-2016 PGJ_RS09335 4e1983199bdbd2eabe0df39707c85d57 510 PANTHER PTHR11654:SF119 5 173 1.4E-116 T 22-04-2016 PGJ_RS09335 4e1983199bdbd2eabe0df39707c85d57 510 Gene3D G3DSA:1.20.1250.20 290 503 1.1E-6 T 22-04-2016 PGJ_RS09335 4e1983199bdbd2eabe0df39707c85d57 510 Gene3D G3DSA:1.20.1250.20 9 173 2.8E-18 T 22-04-2016 PGJ_RS09335 4e1983199bdbd2eabe0df39707c85d57 510 Gene3D G3DSA:1.20.1250.20 234 263 2.8E-18 T 22-04-2016 PGJ_RS09335 4e1983199bdbd2eabe0df39707c85d57 510 PANTHER PTHR11654 234 467 1.4E-116 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS09335 4e1983199bdbd2eabe0df39707c85d57 510 PANTHER PTHR11654 5 173 1.4E-116 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 PGJ_RS00105 0ff28b3a62e3fb13265b33c8ca1e3f1d 1158 Pfam PF01364 Peptidase family C25 409 787 7.0E-78 T 22-04-2016 IPR001769 Gingipain GO:0006508|GO:0008234 PGJ_RS00105 0ff28b3a62e3fb13265b33c8ca1e3f1d 1158 Gene3D G3DSA:3.40.50.1460 559 788 7.6E-56 T 22-04-2016 IPR029030 Caspase-like domain PGJ_RS00105 0ff28b3a62e3fb13265b33c8ca1e3f1d 1158 Gene3D G3DSA:3.40.50.10390 398 558 1.1E-11 T 22-04-2016 IPR029031 Gingipain, N-terminal PGJ_RS00105 0ff28b3a62e3fb13265b33c8ca1e3f1d 1158 SUPERFAMILY SSF52129 398 790 5.96E-94 T 22-04-2016 IPR029030 Caspase-like domain PGJ_RS05295 3def9573303fc17157f607b170767b4d 245 PANTHER PTHR26402:SF545 1 226 6.7E-86 T 22-04-2016 PGJ_RS05295 3def9573303fc17157f607b170767b4d 245 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS05295 3def9573303fc17157f607b170767b4d 245 SMART SM00448 1 112 2.7E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS05295 3def9573303fc17157f607b170767b4d 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 222 5.9E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PGJ_RS05295 3def9573303fc17157f607b170767b4d 245 SMART SM00862 145 222 9.3E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PGJ_RS05295 3def9573303fc17157f607b170767b4d 245 PANTHER PTHR26402 1 226 6.7E-86 T 22-04-2016 PGJ_RS05295 3def9573303fc17157f607b170767b4d 245 Gene3D G3DSA:3.40.50.2300 1 124 9.0E-35 T 22-04-2016 PGJ_RS05295 3def9573303fc17157f607b170767b4d 245 Gene3D G3DSA:1.10.10.10 126 223 2.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS05295 3def9573303fc17157f607b170767b4d 245 SUPERFAMILY SSF52172 1 181 1.1E-35 T 22-04-2016 IPR011006 CheY-like superfamily PGJ_RS03430 3ebf9e7b55fb650766c6b98e6ad02034 505 PIRSF PIRSF016636 18 505 8.5E-156 T 22-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB PGJ_RS03430 3ebf9e7b55fb650766c6b98e6ad02034 505 PANTHER PTHR13285:SF24 1 471 9.8E-106 T 22-04-2016 PGJ_RS03430 3ebf9e7b55fb650766c6b98e6ad02034 505 PIRSF PIRSF500217 18 505 2.7E-157 T 22-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 PGJ_RS03430 3ebf9e7b55fb650766c6b98e6ad02034 505 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 178 399 4.4E-29 T 22-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT PGJ_RS03430 3ebf9e7b55fb650766c6b98e6ad02034 505 PANTHER PTHR13285 1 471 9.8E-106 T 22-04-2016 PGJ_RS06590 8987c7189a787473705d79c3a7dbc06e 501 Pfam PF01943 Polysaccharide biosynthesis protein 8 284 1.2E-14 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 PGJ_RS10000 fcc8669e232afa53421563960a61ad3e 305 PANTHER PTHR30606 9 305 2.6E-47 T 22-04-2016 PGJ_RS10000 fcc8669e232afa53421563960a61ad3e 305 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 296 2.3E-33 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PGJ_RS10000 fcc8669e232afa53421563960a61ad3e 305 PANTHER PTHR30606:SF2 9 305 2.6E-47 T 22-04-2016 PGJ_RS05525 b7cb2fa89d198f5f97b3bb053c1566ac 293 PIRSF PIRSF033579 1 293 1.1E-109 T 22-04-2016 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 PGJ_RS05525 b7cb2fa89d198f5f97b3bb053c1566ac 293 Gene3D G3DSA:3.40.50.1400 28 181 5.2E-39 T 22-04-2016 PGJ_RS05525 b7cb2fa89d198f5f97b3bb053c1566ac 293 Gene3D G3DSA:3.40.50.1400 203 260 1.6E-16 T 22-04-2016 PGJ_RS05525 b7cb2fa89d198f5f97b3bb053c1566ac 293 Pfam PF06180 Cobalt chelatase (CbiK) 31 291 6.9E-100 T 22-04-2016 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 PGJ_RS05525 b7cb2fa89d198f5f97b3bb053c1566ac 293 SUPERFAMILY SSF53800 34 290 6.32E-66 T 22-04-2016 PGJ_RS07985 c177ca417a7c70acf35c0a90d8c74c02 339 Pfam PF13527 Acetyltransferase (GNAT) domain 2 124 2.4E-22 T 22-04-2016 PGJ_RS07985 c177ca417a7c70acf35c0a90d8c74c02 339 Gene3D G3DSA:3.40.630.30 2 121 3.8E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS07985 c177ca417a7c70acf35c0a90d8c74c02 339 SUPERFAMILY SSF55729 2 260 1.42E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS00405 0c7fd8fd6b6e61937439949dbc2f3fd8 331 PANTHER PTHR30438 11 329 3.0E-108 T 22-04-2016 PGJ_RS00405 0c7fd8fd6b6e61937439949dbc2f3fd8 331 Pfam PF13533 Biotin-lipoyl like 49 93 8.3E-12 T 22-04-2016 PGJ_RS00405 0c7fd8fd6b6e61937439949dbc2f3fd8 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 163 285 6.9E-9 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PGJ_RS00405 0c7fd8fd6b6e61937439949dbc2f3fd8 331 Gene3D G3DSA:2.40.50.100 48 80 3.7E-13 T 22-04-2016 PGJ_RS00405 0c7fd8fd6b6e61937439949dbc2f3fd8 331 Gene3D G3DSA:2.40.50.100 207 238 3.7E-13 T 22-04-2016 PGJ_RS00405 0c7fd8fd6b6e61937439949dbc2f3fd8 331 SUPERFAMILY SSF111369 47 106 5.36E-7 T 22-04-2016 PGJ_RS00405 0c7fd8fd6b6e61937439949dbc2f3fd8 331 SUPERFAMILY SSF111369 163 325 9.68E-8 T 22-04-2016 PGJ_RS00405 0c7fd8fd6b6e61937439949dbc2f3fd8 331 PANTHER PTHR30438:SF1 11 329 3.0E-108 T 22-04-2016 PGJ_RS00765 000025d4fcb8dfe23b1025d6ce3fbc3d 185 Gene3D G3DSA:3.40.50.1470 1 185 6.1E-65 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PGJ_RS00765 000025d4fcb8dfe23b1025d6ce3fbc3d 185 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 185 2.2E-53 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PGJ_RS00765 000025d4fcb8dfe23b1025d6ce3fbc3d 185 SUPERFAMILY SSF53178 2 185 1.1E-57 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PGJ_RS00765 000025d4fcb8dfe23b1025d6ce3fbc3d 185 PANTHER PTHR17224 3 185 1.3E-67 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PGJ_RS00765 000025d4fcb8dfe23b1025d6ce3fbc3d 185 Pfam PF01195 Peptidyl-tRNA hydrolase 4 184 2.6E-53 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PGJ_RS00765 000025d4fcb8dfe23b1025d6ce3fbc3d 185 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 PGJ_RS00765 000025d4fcb8dfe23b1025d6ce3fbc3d 185 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 178 28.927 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PGJ_RS00765 000025d4fcb8dfe23b1025d6ce3fbc3d 185 PANTHER PTHR17224:SF1 3 185 1.3E-67 T 22-04-2016 PGJ_RS00765 000025d4fcb8dfe23b1025d6ce3fbc3d 185 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 PGJ_RS09395 9d0456f0d137c1b09881a44910d90bc5 1596 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1126 1533 6.4E-41 T 22-04-2016 IPR007452 Translocation and assembly module TamB PGJ_RS09395 9d0456f0d137c1b09881a44910d90bc5 1596 Pfam PF05170 AsmA family 9 190 7.7E-11 T 22-04-2016 IPR007844 AsmA PGJ_RS03595 1bee133765194f3521d1eadd43db10d7 282 Pfam PF11306 Protein of unknown function (DUF3108) 30 269 4.0E-41 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 PGJ_RS00910 689574f1bb775f2dce911671e30d7cda 237 Gene3D G3DSA:3.20.20.140 47 194 1.4E-33 T 22-04-2016 PGJ_RS00910 689574f1bb775f2dce911671e30d7cda 237 Pfam PF01026 TatD related DNase 46 168 2.0E-27 T 22-04-2016 IPR001130 TatD family GO:0016788 PGJ_RS00910 689574f1bb775f2dce911671e30d7cda 237 PANTHER PTHR10060 50 166 2.4E-33 T 22-04-2016 IPR001130 TatD family GO:0016788 PGJ_RS00910 689574f1bb775f2dce911671e30d7cda 237 SUPERFAMILY SSF51556 15 224 1.78E-35 T 22-04-2016 IPR032466 Metal-dependent hydrolase PGJ_RS06665 19a59a8391e6b56000e0f6536c563a15 133 Pfam PF14053 Domain of unknown function (DUF4248) 63 128 3.6E-15 T 22-04-2016 IPR025342 Protein of unknown function DUF4248 PGJ_RS07000 b2665108230e21ffda0855c7a29d413a 364 PANTHER PTHR32182:SF0 1 362 3.9E-40 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PGJ_RS07000 b2665108230e21ffda0855c7a29d413a 364 Gene3D G3DSA:3.40.50.300 1 172 5.9E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07000 b2665108230e21ffda0855c7a29d413a 364 Gene3D G3DSA:3.40.50.300 233 341 5.9E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07000 b2665108230e21ffda0855c7a29d413a 364 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 362 2.2E-78 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PGJ_RS07000 b2665108230e21ffda0855c7a29d413a 364 PANTHER PTHR32182 1 362 3.9E-40 T 22-04-2016 PGJ_RS07000 b2665108230e21ffda0855c7a29d413a 364 Pfam PF13175 AAA ATPase domain 1 46 6.1E-11 T 22-04-2016 PGJ_RS07000 b2665108230e21ffda0855c7a29d413a 364 ProSitePatterns PS00618 RecF protein signature 2. 301 319 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PGJ_RS07000 b2665108230e21ffda0855c7a29d413a 364 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 364 83.403 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PGJ_RS07000 b2665108230e21ffda0855c7a29d413a 364 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PGJ_RS07000 b2665108230e21ffda0855c7a29d413a 364 SUPERFAMILY SSF52540 1 344 6.86E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05755 d3f2acdaf814968da844dccfd7e6e8d1 137 Pfam PF14058 PcfK-like protein 2 137 1.5E-37 T 22-04-2016 IPR025624 PcfK-like protein PGJ_RS09450 3c1ac1225d3d86f557e95d674c013363 259 Pfam PF05690 Thiazole biosynthesis protein ThiG 5 251 8.5E-107 T 22-04-2016 PGJ_RS09450 3c1ac1225d3d86f557e95d674c013363 259 SUPERFAMILY SSF110399 2 239 1.96E-82 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 PGJ_RS09450 3c1ac1225d3d86f557e95d674c013363 259 Gene3D G3DSA:3.20.20.70 2 256 7.3E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS09450 3c1ac1225d3d86f557e95d674c013363 259 Hamap MF_00443 Thiazole synthase [thiG]. 3 257 42.04 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 PGJ_RS09450 3c1ac1225d3d86f557e95d674c013363 259 PANTHER PTHR34266 1 258 2.3E-146 T 22-04-2016 PGJ_RS02055 5af2145d3dc5b2bca9dc3a295dc49895 412 PANTHER PTHR23417:SF2 1 111 3.3E-51 T 22-04-2016 PGJ_RS02055 5af2145d3dc5b2bca9dc3a295dc49895 412 PANTHER PTHR23417:SF2 174 410 3.3E-51 T 22-04-2016 PGJ_RS02055 5af2145d3dc5b2bca9dc3a295dc49895 412 PANTHER PTHR23417:SF2 129 139 3.3E-51 T 22-04-2016 PGJ_RS02055 5af2145d3dc5b2bca9dc3a295dc49895 412 SUPERFAMILY SSF53756 51 400 1.73E-17 T 22-04-2016 PGJ_RS02055 5af2145d3dc5b2bca9dc3a295dc49895 412 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 49 207 1.5E-48 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 PGJ_RS02055 5af2145d3dc5b2bca9dc3a295dc49895 412 PANTHER PTHR23417 1 111 3.3E-51 T 22-04-2016 PGJ_RS02055 5af2145d3dc5b2bca9dc3a295dc49895 412 PANTHER PTHR23417 174 410 3.3E-51 T 22-04-2016 PGJ_RS02055 5af2145d3dc5b2bca9dc3a295dc49895 412 PANTHER PTHR23417 129 139 3.3E-51 T 22-04-2016 PGJ_RS06305 0f298594d3e2dde0a57c5430983a407b 462 SUPERFAMILY SSF56954 7 459 6.28E-76 T 22-04-2016 PGJ_RS06305 0f298594d3e2dde0a57c5430983a407b 462 Gene3D G3DSA:1.20.1600.10 48 459 1.2E-68 T 22-04-2016 PGJ_RS06305 0f298594d3e2dde0a57c5430983a407b 462 PANTHER PTHR30026 47 457 9.7E-49 T 22-04-2016 PGJ_RS06305 0f298594d3e2dde0a57c5430983a407b 462 Pfam PF02321 Outer membrane efflux protein 48 242 2.6E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS06305 0f298594d3e2dde0a57c5430983a407b 462 Pfam PF02321 Outer membrane efflux protein 272 453 1.8E-32 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS03265 b2f52f843b841e628f43856e43af0af2 238 SMART SM00850 146 237 4.3E-19 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 PGJ_RS03265 b2f52f843b841e628f43856e43af0af2 238 Pfam PF04397 LytTr DNA-binding domain 147 236 3.1E-17 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 PGJ_RS03265 b2f52f843b841e628f43856e43af0af2 238 SMART SM00448 7 115 2.0E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS03265 b2f52f843b841e628f43856e43af0af2 238 Gene3D G3DSA:3.40.50.2300 5 129 2.6E-29 T 22-04-2016 PGJ_RS03265 b2f52f843b841e628f43856e43af0af2 238 Gene3D G3DSA:2.40.50.40 138 206 3.0E-21 T 22-04-2016 PGJ_RS03265 b2f52f843b841e628f43856e43af0af2 238 SUPERFAMILY SSF52172 5 131 2.56E-26 T 22-04-2016 IPR011006 CheY-like superfamily PGJ_RS03265 b2f52f843b841e628f43856e43af0af2 238 PANTHER PTHR26402 7 139 3.7E-31 T 22-04-2016 PGJ_RS03265 b2f52f843b841e628f43856e43af0af2 238 Pfam PF00072 Response regulator receiver domain 10 116 4.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PGJ_RS02660 ca996154bca41554d119c0286f2927f2 444 Gene3D G3DSA:3.40.50.1010 100 153 2.7E-18 T 22-04-2016 IPR029060 PIN domain-like PGJ_RS02660 ca996154bca41554d119c0286f2927f2 444 Gene3D G3DSA:3.40.50.1010 8 68 2.7E-18 T 22-04-2016 IPR029060 PIN domain-like PGJ_RS02660 ca996154bca41554d119c0286f2927f2 444 PANTHER PTHR30473:SF2 7 444 7.9E-167 T 22-04-2016 PGJ_RS02660 ca996154bca41554d119c0286f2927f2 444 PANTHER PTHR30473 7 444 7.9E-167 T 22-04-2016 PGJ_RS02660 ca996154bca41554d119c0286f2927f2 444 SMART SM00670 8 137 6.3E-11 T 22-04-2016 IPR002716 PIN domain PGJ_RS02660 ca996154bca41554d119c0286f2927f2 444 Pfam PF02562 PhoH-like protein 233 436 1.5E-50 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 PGJ_RS02660 ca996154bca41554d119c0286f2927f2 444 Gene3D G3DSA:3.40.50.300 232 443 3.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02660 ca996154bca41554d119c0286f2927f2 444 Pfam PF13638 PIN domain 10 149 3.6E-33 T 22-04-2016 IPR002716 PIN domain PGJ_RS02660 ca996154bca41554d119c0286f2927f2 444 SUPERFAMILY SSF52540 349 421 1.06E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02660 ca996154bca41554d119c0286f2927f2 444 SUPERFAMILY SSF52540 134 200 1.06E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02660 ca996154bca41554d119c0286f2927f2 444 SUPERFAMILY SSF52540 31 59 1.06E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02660 ca996154bca41554d119c0286f2927f2 444 SUPERFAMILY SSF52540 232 316 1.06E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03040 2459ac9065f6a145de849383abdf284c 234 PANTHER PTHR11079:SF83 2 233 5.1E-82 T 22-04-2016 PGJ_RS03040 2459ac9065f6a145de849383abdf284c 234 Pfam PF00849 RNA pseudouridylate synthase 9 165 2.9E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS03040 2459ac9065f6a145de849383abdf284c 234 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 54 68 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS03040 2459ac9065f6a145de849383abdf284c 234 SUPERFAMILY SSF55120 1 213 8.64E-53 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PGJ_RS03040 2459ac9065f6a145de849383abdf284c 234 PANTHER PTHR11079 2 233 5.1E-82 T 22-04-2016 PGJ_RS00365 1efe6c8680ce76e18030cb15022d3e60 481 Gene3D G3DSA:3.20.20.70 120 394 2.1E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS00365 1efe6c8680ce76e18030cb15022d3e60 481 Pfam PF16499 Alpha galactosidase A 135 439 1.5E-56 T 22-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PGJ_RS00365 1efe6c8680ce76e18030cb15022d3e60 481 Gene3D G3DSA:2.60.40.1180 395 442 8.7E-7 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta PGJ_RS00365 1efe6c8680ce76e18030cb15022d3e60 481 SUPERFAMILY SSF51445 116 400 2.28E-64 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS00365 1efe6c8680ce76e18030cb15022d3e60 481 PRINTS PR00740 Glycosyl hydrolase family 27 signature 194 215 3.3E-26 T 22-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PGJ_RS00365 1efe6c8680ce76e18030cb15022d3e60 481 PRINTS PR00740 Glycosyl hydrolase family 27 signature 153 168 3.3E-26 T 22-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PGJ_RS00365 1efe6c8680ce76e18030cb15022d3e60 481 PRINTS PR00740 Glycosyl hydrolase family 27 signature 356 377 3.3E-26 T 22-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PGJ_RS00365 1efe6c8680ce76e18030cb15022d3e60 481 PRINTS PR00740 Glycosyl hydrolase family 27 signature 257 275 3.3E-26 T 22-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PGJ_RS00365 1efe6c8680ce76e18030cb15022d3e60 481 PRINTS PR00740 Glycosyl hydrolase family 27 signature 228 245 3.3E-26 T 22-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PGJ_RS00365 1efe6c8680ce76e18030cb15022d3e60 481 PANTHER PTHR11452 88 442 2.9E-92 T 22-04-2016 PGJ_RS08170 3d088471fe5334cdc88d72da081f730c 204 SUPERFAMILY SSF64307 1 69 3.79E-13 T 22-04-2016 IPR001455 TusA-like domain PGJ_RS08170 3d088471fe5334cdc88d72da081f730c 204 Pfam PF02635 DsrE/DsrF-like family 117 198 1.4E-6 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein PGJ_RS08170 3d088471fe5334cdc88d72da081f730c 204 PANTHER PTHR33279:SF3 1 203 5.5E-29 T 22-04-2016 PGJ_RS08170 3d088471fe5334cdc88d72da081f730c 204 Pfam PF01206 Sulfurtransferase TusA 3 64 5.7E-13 T 22-04-2016 IPR001455 TusA-like domain PGJ_RS08170 3d088471fe5334cdc88d72da081f730c 204 SUPERFAMILY SSF75169 105 202 5.21E-13 T 22-04-2016 IPR027396 DsrEFH-like PGJ_RS08170 3d088471fe5334cdc88d72da081f730c 204 Gene3D G3DSA:3.40.1260.10 132 189 2.2E-7 T 22-04-2016 IPR027396 DsrEFH-like PGJ_RS08170 3d088471fe5334cdc88d72da081f730c 204 Gene3D G3DSA:3.30.110.40 1 66 1.8E-11 T 22-04-2016 IPR001455 TusA-like domain PGJ_RS08170 3d088471fe5334cdc88d72da081f730c 204 PANTHER PTHR33279 1 203 5.5E-29 T 22-04-2016 PGJ_RS08170 3d088471fe5334cdc88d72da081f730c 204 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 4 28 - T 22-04-2016 IPR001455 TusA-like domain PGJ_RS08170 3d088471fe5334cdc88d72da081f730c 204 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 4 203 1.1E-60 T 22-04-2016 IPR019870 Selenium metabolism protein YedF PGJ_RS05860 ffcb9ded87d1fe24bae9deb8080e06c5 391 PANTHER PTHR30535 29 388 4.0E-47 T 22-04-2016 PGJ_RS05860 ffcb9ded87d1fe24bae9deb8080e06c5 391 SUPERFAMILY SSF53807 97 376 7.85E-28 T 22-04-2016 PGJ_RS05860 ffcb9ded87d1fe24bae9deb8080e06c5 391 Gene3D G3DSA:3.40.50.1980 97 217 4.0E-6 T 22-04-2016 PGJ_RS05860 ffcb9ded87d1fe24bae9deb8080e06c5 391 Gene3D G3DSA:3.40.50.1980 221 381 3.7E-8 T 22-04-2016 PGJ_RS05860 ffcb9ded87d1fe24bae9deb8080e06c5 391 Pfam PF01497 Periplasmic binding protein 105 341 5.4E-47 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 PGJ_RS05860 ffcb9ded87d1fe24bae9deb8080e06c5 391 PANTHER PTHR30535:SF11 29 388 4.0E-47 T 22-04-2016 PGJ_RS04655 e926d2a529b0fe3914d1a506f8f5ef40 387 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 369 5.2E-74 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PGJ_RS04655 e926d2a529b0fe3914d1a506f8f5ef40 387 PANTHER PTHR30365 1 387 1.7E-88 T 22-04-2016 PGJ_RS04655 e926d2a529b0fe3914d1a506f8f5ef40 387 PANTHER PTHR30365:SF6 1 387 1.7E-88 T 22-04-2016 PGJ_RS00400 7ff91efed4208dc7b0f04b47bee1ed9e 393 Pfam PF12698 ABC-2 family transporter protein 28 378 2.2E-33 T 22-04-2016 PGJ_RS00400 7ff91efed4208dc7b0f04b47bee1ed9e 393 PANTHER PTHR30294 4 378 2.9E-75 T 22-04-2016 PGJ_RS00400 7ff91efed4208dc7b0f04b47bee1ed9e 393 PANTHER PTHR30294:SF12 4 378 2.9E-75 T 22-04-2016 PGJ_RS03400 a92adbef0ddd6e85892567089ee18b5d 317 SUPERFAMILY SSF51735 98 288 1.14E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03400 a92adbef0ddd6e85892567089ee18b5d 317 Gene3D G3DSA:3.40.50.720 107 288 8.3E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03400 a92adbef0ddd6e85892567089ee18b5d 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 1.6E-54 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PGJ_RS03400 a92adbef0ddd6e85892567089ee18b5d 317 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 177 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PGJ_RS03400 a92adbef0ddd6e85892567089ee18b5d 317 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PGJ_RS03400 a92adbef0ddd6e85892567089ee18b5d 317 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PGJ_RS03400 a92adbef0ddd6e85892567089ee18b5d 317 SUPERFAMILY SSF52283 1 132 3.78E-27 T 22-04-2016 PGJ_RS03400 a92adbef0ddd6e85892567089ee18b5d 317 Gene3D G3DSA:3.40.50.720 1 106 6.5E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03400 a92adbef0ddd6e85892567089ee18b5d 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 315 1.2E-25 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PGJ_RS03400 a92adbef0ddd6e85892567089ee18b5d 317 PANTHER PTHR10996 1 311 2.4E-97 T 22-04-2016 PGJ_RS05615 beda8b9bdc110262094ff2e834036abc 107 Pfam PF09357 RteC protein 8 98 2.2E-25 T 22-04-2016 IPR018534 Tetracycline regulation of excision, RteC PGJ_RS01995 e9a50a3ea227b81b7644d793305a5bb6 439 PANTHER PTHR30595 8 372 7.6E-28 T 22-04-2016 PGJ_RS01995 e9a50a3ea227b81b7644d793305a5bb6 439 Pfam PF04326 Putative DNA-binding domain 3 108 3.0E-12 T 22-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 PGJ_RS01995 e9a50a3ea227b81b7644d793305a5bb6 439 PANTHER PTHR30595:SF6 8 372 7.6E-28 T 22-04-2016 PGJ_RS01995 e9a50a3ea227b81b7644d793305a5bb6 439 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 277 363 1.4E-18 T 22-04-2016 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain PGJ_RS07965 2361a3782a6d32d5a8c9e8080298824c 455 Pfam PF14092 Domain of unknown function (DUF4270) 26 437 5.1E-56 T 22-04-2016 IPR025366 Protein of unknown function DUF4270 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 111 7.3E-20 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 SUPERFAMILY SSF55681 120 421 1.73E-88 T 22-04-2016 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 226 401 1.4E-27 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 8.6E-132 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 SUPERFAMILY SSF46589 1 116 9.94E-23 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 Gene3D G3DSA:3.30.930.10 109 418 2.1E-116 T 22-04-2016 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 Gene3D G3DSA:1.10.287.40 1 108 1.6E-16 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 2.7E-19 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 2.7E-19 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 2.7E-19 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 2.7E-19 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 2.7E-19 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 PANTHER PTHR11778 1 422 2.5E-167 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PGJ_RS07355 313e9ecd1b1b8d8dd87e3a0e135e3d9f 423 PIRSF PIRSF001529 1 422 1.6E-138 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PGJ_RS08230 d65c793a84a6f1eef4d18c2c17753020 794 Pfam PF07715 TonB-dependent Receptor Plug Domain 92 200 5.5E-11 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS08230 d65c793a84a6f1eef4d18c2c17753020 794 SUPERFAMILY SSF56935 78 794 1.65E-75 T 22-04-2016 PGJ_RS08230 d65c793a84a6f1eef4d18c2c17753020 794 Gene3D G3DSA:2.40.170.20 202 794 8.6E-60 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS08230 d65c793a84a6f1eef4d18c2c17753020 794 PANTHER PTHR32552 16 651 4.6E-139 T 22-04-2016 PGJ_RS08230 d65c793a84a6f1eef4d18c2c17753020 794 PANTHER PTHR32552 668 794 4.6E-139 T 22-04-2016 PGJ_RS08230 d65c793a84a6f1eef4d18c2c17753020 794 Pfam PF00593 TonB dependent receptor 519 780 1.1E-17 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS08230 d65c793a84a6f1eef4d18c2c17753020 794 PANTHER PTHR32552:SF38 16 651 4.6E-139 T 22-04-2016 PGJ_RS08230 d65c793a84a6f1eef4d18c2c17753020 794 PANTHER PTHR32552:SF38 668 794 4.6E-139 T 22-04-2016 PGJ_RS08230 d65c793a84a6f1eef4d18c2c17753020 794 Gene3D G3DSA:2.170.130.10 77 201 1.1E-13 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS09225 3bf7db84fd4b42f6a14f3140b2d783ca 162 PANTHER PTHR22778:SF16 1 160 5.2E-38 T 22-04-2016 PGJ_RS09225 3bf7db84fd4b42f6a14f3140b2d783ca 162 Pfam PF00186 Dihydrofolate reductase 1 159 1.3E-56 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PGJ_RS09225 3bf7db84fd4b42f6a14f3140b2d783ca 162 Gene3D G3DSA:3.40.430.10 1 159 3.3E-53 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain PGJ_RS09225 3bf7db84fd4b42f6a14f3140b2d783ca 162 PANTHER PTHR22778 1 160 5.2E-38 T 22-04-2016 PGJ_RS09225 3bf7db84fd4b42f6a14f3140b2d783ca 162 SUPERFAMILY SSF53597 1 160 3.17E-50 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain PGJ_RS09225 3bf7db84fd4b42f6a14f3140b2d783ca 162 PRINTS PR00070 Dihydrofolate reductase signature 40 51 1.5E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PGJ_RS09225 3bf7db84fd4b42f6a14f3140b2d783ca 162 PRINTS PR00070 Dihydrofolate reductase signature 27 35 1.5E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PGJ_RS09225 3bf7db84fd4b42f6a14f3140b2d783ca 162 PRINTS PR00070 Dihydrofolate reductase signature 91 105 1.5E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PGJ_RS09225 3bf7db84fd4b42f6a14f3140b2d783ca 162 PRINTS PR00070 Dihydrofolate reductase signature 13 23 1.5E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PGJ_RS09225 3bf7db84fd4b42f6a14f3140b2d783ca 162 PIRSF PIRSF000194 1 162 9.6E-54 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PGJ_RS00570 f6d96fff1a63a731d3f6d538023aed63 206 PANTHER PTHR16301:SF0 1 192 3.9E-50 T 22-04-2016 PGJ_RS00570 f6d96fff1a63a731d3f6d538023aed63 206 Gene3D G3DSA:3.30.70.240 137 190 1.4E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain PGJ_RS00570 f6d96fff1a63a731d3f6d538023aed63 206 PANTHER PTHR16301 1 192 3.9E-50 T 22-04-2016 IPR023582 Impact family PGJ_RS00570 f6d96fff1a63a731d3f6d538023aed63 206 SUPERFAMILY SSF54211 5 132 4.93E-39 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PGJ_RS00570 f6d96fff1a63a731d3f6d538023aed63 206 Gene3D G3DSA:3.30.230.30 6 130 3.7E-42 T 22-04-2016 IPR001498 Impact, N-terminal PGJ_RS00570 f6d96fff1a63a731d3f6d538023aed63 206 Pfam PF01205 Uncharacterized protein family UPF0029 20 125 3.8E-27 T 22-04-2016 IPR001498 Impact, N-terminal PGJ_RS05560 36aedd2640d2acc40e7c90db6d69524e 105 SUPERFAMILY SSF46955 41 97 2.01E-6 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS05560 36aedd2640d2acc40e7c90db6d69524e 105 Gene3D G3DSA:1.10.10.10 41 93 1.8E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS05560 36aedd2640d2acc40e7c90db6d69524e 105 Pfam PF12728 Helix-turn-helix domain 41 89 1.7E-7 T 22-04-2016 PGJ_RS05560 36aedd2640d2acc40e7c90db6d69524e 105 PANTHER PTHR34585 3 100 3.0E-27 T 22-04-2016 PGJ_RS05560 36aedd2640d2acc40e7c90db6d69524e 105 PANTHER PTHR34585:SF7 3 100 3.0E-27 T 22-04-2016 PGJ_RS06520 308ab5a938cdae54e87759e8e250d909 238 TIGRFAM TIGR01200 GLPGLI: GLPGLI family protein 4 218 5.9E-46 T 22-04-2016 IPR005901 GLPGLI family protein PGJ_RS06520 308ab5a938cdae54e87759e8e250d909 238 Pfam PF09697 Protein of unknown function (Porph_ging) 145 175 6.5E-10 T 22-04-2016 IPR005901 GLPGLI family protein PGJ_RS04925 a302a5aa18433802bce4080a406f0d69 283 PANTHER PTHR30589:SF0 1 273 3.8E-62 T 22-04-2016 PGJ_RS04925 a302a5aa18433802bce4080a406f0d69 283 PANTHER PTHR30589 1 273 3.8E-62 T 22-04-2016 PGJ_RS04925 a302a5aa18433802bce4080a406f0d69 283 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 277 16.78 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PGJ_RS04925 a302a5aa18433802bce4080a406f0d69 283 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 10 277 1.4E-48 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PGJ_RS04925 a302a5aa18433802bce4080a406f0d69 283 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 271 2.0E-70 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PGJ_RS05625 aea125965057174c91cffb985919675f 670 Pfam PF12696 TraM recognition site of TraD and TraG 462 572 1.7E-14 T 22-04-2016 IPR032689 TraD/TraG, TraM recognition site PGJ_RS05625 aea125965057174c91cffb985919675f 670 SUPERFAMILY SSF52540 190 578 4.45E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05625 aea125965057174c91cffb985919675f 670 Gene3D G3DSA:3.40.50.300 204 278 3.0E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05625 aea125965057174c91cffb985919675f 670 Gene3D G3DSA:3.40.50.300 414 579 3.0E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05625 aea125965057174c91cffb985919675f 670 Pfam PF14293 YWFCY protein 3 62 2.5E-29 T 22-04-2016 IPR025988 YWFCY domain PGJ_RS08940 ca5d6772c3124391fcd5ab0397b53b44 301 Pfam PF07751 Abi-like protein 36 220 4.1E-50 T 22-04-2016 IPR011664 Abortive infection system protein AbiD/AbiF-like PGJ_RS02820 9970e0abeb89b61a486147af4c289244 160 Gene3D G3DSA:1.20.1260.10 2 160 1.2E-52 T 22-04-2016 IPR012347 Ferritin-related PGJ_RS02820 9970e0abeb89b61a486147af4c289244 160 PANTHER PTHR11431 4 143 1.3E-40 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 PGJ_RS02820 9970e0abeb89b61a486147af4c289244 160 Pfam PF00210 Ferritin-like domain 9 144 8.4E-41 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PGJ_RS02820 9970e0abeb89b61a486147af4c289244 160 PANTHER PTHR11431:SF4 4 143 1.3E-40 T 22-04-2016 PGJ_RS02820 9970e0abeb89b61a486147af4c289244 160 SUPERFAMILY SSF47240 3 157 4.92E-50 T 22-04-2016 IPR009078 Ferritin-like superfamily PGJ_RS04330 6c5f154b023bdb8d6cdf72b486ffdf16 405 PANTHER PTHR30307:SF0 332 405 1.0E-123 T 22-04-2016 PGJ_RS04330 6c5f154b023bdb8d6cdf72b486ffdf16 405 PANTHER PTHR30307:SF0 8 288 1.0E-123 T 22-04-2016 PGJ_RS04330 6c5f154b023bdb8d6cdf72b486ffdf16 405 Gene3D G3DSA:3.40.1780.10 7 66 3.7E-79 T 22-04-2016 PGJ_RS04330 6c5f154b023bdb8d6cdf72b486ffdf16 405 Gene3D G3DSA:3.40.1780.10 201 288 3.7E-79 T 22-04-2016 PGJ_RS04330 6c5f154b023bdb8d6cdf72b486ffdf16 405 Gene3D G3DSA:3.40.1780.10 334 403 3.7E-79 T 22-04-2016 PGJ_RS04330 6c5f154b023bdb8d6cdf72b486ffdf16 405 Pfam PF02547 Queuosine biosynthesis protein 10 403 5.6E-98 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS04330 6c5f154b023bdb8d6cdf72b486ffdf16 405 Gene3D G3DSA:2.40.10.240 68 121 2.5E-5 T 22-04-2016 PGJ_RS04330 6c5f154b023bdb8d6cdf72b486ffdf16 405 SUPERFAMILY SSF111337 9 287 9.94E-102 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS04330 6c5f154b023bdb8d6cdf72b486ffdf16 405 SUPERFAMILY SSF111337 332 403 9.94E-102 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS04330 6c5f154b023bdb8d6cdf72b486ffdf16 405 PANTHER PTHR30307 332 405 1.0E-123 T 22-04-2016 PGJ_RS04330 6c5f154b023bdb8d6cdf72b486ffdf16 405 PANTHER PTHR30307 8 288 1.0E-123 T 22-04-2016 PGJ_RS04330 6c5f154b023bdb8d6cdf72b486ffdf16 405 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 7 404 36.561 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PGJ_RS02800 fa2a5f69c9870104fba1d59d0e309bb8 573 SMART SM00155 461 492 0.085 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PGJ_RS02800 fa2a5f69c9870104fba1d59d0e309bb8 573 SMART SM00155 277 307 9.4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PGJ_RS02800 fa2a5f69c9870104fba1d59d0e309bb8 573 PANTHER PTHR21248 274 561 1.8E-13 T 22-04-2016 PGJ_RS02800 fa2a5f69c9870104fba1d59d0e309bb8 573 SUPERFAMILY SSF56024 362 522 2.75E-10 T 22-04-2016 PGJ_RS02800 fa2a5f69c9870104fba1d59d0e309bb8 573 Gene3D G3DSA:3.30.870.10 196 339 5.3E-14 T 22-04-2016 PGJ_RS02800 fa2a5f69c9870104fba1d59d0e309bb8 573 Gene3D G3DSA:3.30.870.10 462 523 1.4E-9 T 22-04-2016 PGJ_RS02800 fa2a5f69c9870104fba1d59d0e309bb8 573 Gene3D G3DSA:3.30.870.10 417 422 1.4E-9 T 22-04-2016 PGJ_RS02800 fa2a5f69c9870104fba1d59d0e309bb8 573 Pfam PF13091 PLD-like domain 233 335 2.6E-9 T 22-04-2016 IPR025202 Phospholipase D-like domain PGJ_RS02800 fa2a5f69c9870104fba1d59d0e309bb8 573 Pfam PF13091 PLD-like domain 456 509 4.8E-8 T 22-04-2016 IPR025202 Phospholipase D-like domain PGJ_RS02800 fa2a5f69c9870104fba1d59d0e309bb8 573 SUPERFAMILY SSF56024 195 340 7.65E-15 T 22-04-2016 PGJ_RS02800 fa2a5f69c9870104fba1d59d0e309bb8 573 PANTHER PTHR21248:SF3 274 561 1.8E-13 T 22-04-2016 PGJ_RS09510 441b1f3525e1650019f6cc052068f428 269 PANTHER PTHR13754 2 262 2.3E-67 T 22-04-2016 PGJ_RS09510 441b1f3525e1650019f6cc052068f428 269 SMART SM00849 12 195 3.5E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS09510 441b1f3525e1650019f6cc052068f428 269 SUPERFAMILY SSF56281 5 252 1.65E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS09510 441b1f3525e1650019f6cc052068f428 269 Pfam PF12706 Beta-lactamase superfamily domain 25 207 7.6E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS09510 441b1f3525e1650019f6cc052068f428 269 PANTHER PTHR13754:SF15 2 262 2.3E-67 T 22-04-2016 PGJ_RS09510 441b1f3525e1650019f6cc052068f428 269 Gene3D G3DSA:3.60.15.10 14 255 2.6E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS07880 723ba34b425d1d62641eea09ed814c3a 173 Pfam PF02525 Flavodoxin-like fold 2 167 1.7E-34 T 22-04-2016 IPR003680 Flavodoxin-like fold PGJ_RS07880 723ba34b425d1d62641eea09ed814c3a 173 PANTHER PTHR10204 1 152 1.5E-47 T 22-04-2016 PGJ_RS07880 723ba34b425d1d62641eea09ed814c3a 173 Gene3D G3DSA:3.40.50.360 1 169 2.3E-37 T 22-04-2016 IPR029039 Flavoprotein-like domain PGJ_RS07880 723ba34b425d1d62641eea09ed814c3a 173 PANTHER PTHR10204:SF42 1 152 1.5E-47 T 22-04-2016 PGJ_RS07880 723ba34b425d1d62641eea09ed814c3a 173 SUPERFAMILY SSF52218 1 171 2.12E-38 T 22-04-2016 IPR029039 Flavoprotein-like domain PGJ_RS04520 655feae9a1f49e7065dc4157bf2781cf 138 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 14 133 1.5E-30 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PGJ_RS04520 655feae9a1f49e7065dc4157bf2781cf 138 SUPERFAMILY SSF52540 25 125 2.26E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04520 655feae9a1f49e7065dc4157bf2781cf 138 PANTHER PTHR33540 1 132 1.2E-32 T 22-04-2016 PGJ_RS04520 655feae9a1f49e7065dc4157bf2781cf 138 Gene3D G3DSA:3.40.50.300 3 137 5.9E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04520 655feae9a1f49e7065dc4157bf2781cf 138 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 130 9.5E-34 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PGJ_RS08545 c0e0c9fdc1f761309157a2ac12840a22 468 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 14 465 1.4E-119 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PGJ_RS08545 c0e0c9fdc1f761309157a2ac12840a22 468 Pfam PF02397 Bacterial sugar transferase 281 463 2.5E-52 T 22-04-2016 IPR003362 Bacterial sugar transferase PGJ_RS08545 c0e0c9fdc1f761309157a2ac12840a22 468 PANTHER PTHR30576 1 467 4.7E-86 T 22-04-2016 PGJ_RS06235 30ef60541e99ed719b8562135ac7949b 379 Pfam PF00753 Metallo-beta-lactamase superfamily 13 81 2.1E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS06235 30ef60541e99ed719b8562135ac7949b 379 SUPERFAMILY SSF56281 268 361 6.23E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS06235 30ef60541e99ed719b8562135ac7949b 379 SUPERFAMILY SSF56281 3 89 6.23E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS06235 30ef60541e99ed719b8562135ac7949b 379 SUPERFAMILY SSF56281 138 181 6.23E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS06235 30ef60541e99ed719b8562135ac7949b 379 Gene3D G3DSA:3.60.15.10 263 345 3.4E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS06235 30ef60541e99ed719b8562135ac7949b 379 Gene3D G3DSA:3.60.15.10 9 176 3.4E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS07770 db3f59fc4b9bf43c2f6425c8a122bd62 767 PANTHER PTHR32468 67 611 4.2E-161 T 22-04-2016 PGJ_RS07770 db3f59fc4b9bf43c2f6425c8a122bd62 767 PANTHER PTHR32468 634 692 4.2E-161 T 22-04-2016 PGJ_RS07770 db3f59fc4b9bf43c2f6425c8a122bd62 767 Pfam PF00999 Sodium/hydrogen exchanger family 80 467 5.2E-58 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PGJ_RS07770 db3f59fc4b9bf43c2f6425c8a122bd62 767 PANTHER PTHR32468:SF0 67 611 4.2E-161 T 22-04-2016 PGJ_RS07770 db3f59fc4b9bf43c2f6425c8a122bd62 767 PANTHER PTHR32468:SF0 634 692 4.2E-161 T 22-04-2016 PGJ_RS08055 c431481a35fe785e3a4cace1e5c8c0ed 117 Pfam PF09633 Protein of unknown function (DUF2023) 11 113 8.1E-41 T 22-04-2016 IPR018594 Domain of unknown function DUF2023 PGJ_RS08055 c431481a35fe785e3a4cace1e5c8c0ed 117 SUPERFAMILY SSF160448 5 114 9.55E-45 T 22-04-2016 IPR018594 Domain of unknown function DUF2023 PGJ_RS08055 c431481a35fe785e3a4cace1e5c8c0ed 117 Gene3D G3DSA:3.30.2190.10 3 116 4.2E-49 T 22-04-2016 IPR018594 Domain of unknown function DUF2023 PGJ_RS06270 430f83d160a66b9e69275ba4ca9e41f9 157 SUPERFAMILY SSF47729 37 118 4.56E-10 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS06270 430f83d160a66b9e69275ba4ca9e41f9 157 Gene3D G3DSA:4.10.520.10 40 92 2.4E-4 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS06045 71c907a79d42d82852c0e216c163887d 347 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 294 3.0E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PGJ_RS06045 71c907a79d42d82852c0e216c163887d 347 SUPERFAMILY SSF56219 25 345 1.99E-33 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PGJ_RS06045 71c907a79d42d82852c0e216c163887d 347 Gene3D G3DSA:3.60.10.10 26 343 2.1E-13 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PGJ_RS04610 3e10eed7f3b1371da5ee362d026074b5 180 PANTHER PTHR40438 4 179 8.1E-13 T 22-04-2016 PGJ_RS04610 3e10eed7f3b1371da5ee362d026074b5 180 Gene3D G3DSA:3.50.20.10 3 170 3.7E-39 T 22-04-2016 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PGJ_RS04610 3e10eed7f3b1371da5ee362d026074b5 180 Pfam PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) 9 170 9.8E-32 T 22-04-2016 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PGJ_RS04610 3e10eed7f3b1371da5ee362d026074b5 180 SUPERFAMILY SSF56271 4 171 1.49E-37 T 22-04-2016 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PGJ_RS04610 3e10eed7f3b1371da5ee362d026074b5 180 PIRSF PIRSF005216 6 172 2.1E-45 T 22-04-2016 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PGJ_RS04610 3e10eed7f3b1371da5ee362d026074b5 180 ProDom PD010449 DECARBOXYLASE PYRUVOYL-DEPENDENT ARGININE SUBUNIT ALPHA CONTAINS: BETA PVLARGDC LYA DECARBOX 10 82 1.0E-5 T 22-04-2016 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PGJ_RS04610 3e10eed7f3b1371da5ee362d026074b5 180 PANTHER PTHR40438:SF1 4 179 8.1E-13 T 22-04-2016 PGJ_RS10005 a7d72be5bafd7353cc18846626f751f4 336 SUPERFAMILY SSF53448 1 275 5.63E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS10005 a7d72be5bafd7353cc18846626f751f4 336 Pfam PF13641 Glycosyltransferase like family 2 3 222 2.3E-21 T 22-04-2016 PGJ_RS10005 a7d72be5bafd7353cc18846626f751f4 336 PANTHER PTHR22916:SF26 1 139 5.4E-54 T 22-04-2016 PGJ_RS10005 a7d72be5bafd7353cc18846626f751f4 336 PANTHER PTHR22916:SF26 160 274 5.4E-54 T 22-04-2016 PGJ_RS10005 a7d72be5bafd7353cc18846626f751f4 336 PANTHER PTHR22916 1 139 5.4E-54 T 22-04-2016 PGJ_RS10005 a7d72be5bafd7353cc18846626f751f4 336 PANTHER PTHR22916 160 274 5.4E-54 T 22-04-2016 PGJ_RS10005 a7d72be5bafd7353cc18846626f751f4 336 Gene3D G3DSA:3.90.550.10 5 251 1.7E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 SUPERFAMILY SSF51905 1 370 1.13E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 Gene3D G3DSA:3.50.50.60 2 137 1.9E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 337 444 6.5E-24 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PANTHER PTHR22912:SF125 1 449 2.1E-158 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 317 3.8E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 333 354 1.0E-64 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 1.0E-64 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 1.0E-64 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.0E-64 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 440 1.0E-64 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 1.0E-64 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 398 413 1.0E-64 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 1.0E-64 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 51 1.0E-64 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 5.2E-33 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 5.2E-33 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 5.2E-33 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 5.2E-33 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 5.2E-33 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PANTHER PTHR22912 1 449 2.1E-158 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 PIRSF PIRSF000350 1 447 1.5E-78 T 22-04-2016 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 SUPERFAMILY SSF55424 334 446 1.6E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 37 47 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 446 1.7E-131 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 Gene3D G3DSA:3.30.390.30 332 446 5.2E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PGJ_RS04940 c7ce99573da84c40b6c24143360bbd2f 449 Gene3D G3DSA:3.50.50.60 138 326 1.8E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PGJ_RS09815 b03ac54cd749a7c5324624f76ab118f7 451 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 4 255 1.8E-84 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 PGJ_RS09815 b03ac54cd749a7c5324624f76ab118f7 451 PANTHER PTHR37839 2 451 9.1E-145 T 22-04-2016 PGJ_RS09815 b03ac54cd749a7c5324624f76ab118f7 451 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 4 450 40.698 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 PGJ_RS09815 b03ac54cd749a7c5324624f76ab118f7 451 Gene3D G3DSA:2.40.50.100 29 85 5.7E-4 T 22-04-2016 PGJ_RS09815 b03ac54cd749a7c5324624f76ab118f7 451 Pfam PF11973 NQRA C-terminal domain 261 312 8.0E-16 T 22-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 PGJ_RS09815 b03ac54cd749a7c5324624f76ab118f7 451 PANTHER PTHR37839:SF1 2 451 9.1E-145 T 22-04-2016 PGJ_RS09815 b03ac54cd749a7c5324624f76ab118f7 451 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 5 450 4.4E-199 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 PGJ_RS01255 130ea373ff638b93c4ac4fec39ec9395 344 SUPERFAMILY SSF48317 117 206 8.11E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PGJ_RS01255 130ea373ff638b93c4ac4fec39ec9395 344 SUPERFAMILY SSF48317 243 323 8.11E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PGJ_RS01255 130ea373ff638b93c4ac4fec39ec9395 344 Gene3D G3DSA:1.20.144.10 251 316 1.4E-5 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PGJ_RS01255 130ea373ff638b93c4ac4fec39ec9395 344 Pfam PF14378 PAP2 superfamily 135 317 2.8E-19 T 22-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 PGJ_RS03045 a68c5fc0281f21fd9f09e490ad0d21ec 199 PANTHER PTHR26402:SF458 122 198 8.3E-14 T 22-04-2016 PGJ_RS03045 a68c5fc0281f21fd9f09e490ad0d21ec 199 SUPERFAMILY SSF46894 116 193 2.45E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PGJ_RS03045 a68c5fc0281f21fd9f09e490ad0d21ec 199 SMART SM00421 129 186 4.0E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PGJ_RS03045 a68c5fc0281f21fd9f09e490ad0d21ec 199 ProSitePatterns PS00622 LuxR-type HTH domain signature. 146 173 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PGJ_RS03045 a68c5fc0281f21fd9f09e490ad0d21ec 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 162 1.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PGJ_RS03045 a68c5fc0281f21fd9f09e490ad0d21ec 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 174 1.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PGJ_RS03045 a68c5fc0281f21fd9f09e490ad0d21ec 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 132 146 1.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PGJ_RS03045 a68c5fc0281f21fd9f09e490ad0d21ec 199 PANTHER PTHR26402 122 198 8.3E-14 T 22-04-2016 PGJ_RS03045 a68c5fc0281f21fd9f09e490ad0d21ec 199 Gene3D G3DSA:1.10.10.10 131 193 7.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS03045 a68c5fc0281f21fd9f09e490ad0d21ec 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 131 186 7.5E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PGJ_RS01710 a6b448e8741e003a2f45ddc35731c97f 364 PANTHER PTHR30518 11 364 6.5E-65 T 22-04-2016 PGJ_RS01710 a6b448e8741e003a2f45ddc35731c97f 364 Gene3D G3DSA:3.30.160.60 325 361 7.8E-8 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 PGJ_RS01710 a6b448e8741e003a2f45ddc35731c97f 364 PANTHER PTHR30518:SF2 11 364 6.5E-65 T 22-04-2016 PGJ_RS01710 a6b448e8741e003a2f45ddc35731c97f 364 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 30 360 4.3E-45 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like PGJ_RS01710 a6b448e8741e003a2f45ddc35731c97f 364 Pfam PF02618 YceG-like family 64 351 6.1E-63 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like PGJ_RS04915 9f72b0dc89fd2142ed66eb03709a0cd6 348 PANTHER PTHR11078 247 342 1.8E-17 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 PGJ_RS04915 9f72b0dc89fd2142ed66eb03709a0cd6 348 PANTHER PTHR11078 46 203 1.8E-17 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 PGJ_RS04915 9f72b0dc89fd2142ed66eb03709a0cd6 348 Gene3D G3DSA:1.10.940.10 196 336 1.5E-32 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PGJ_RS04915 9f72b0dc89fd2142ed66eb03709a0cd6 348 SUPERFAMILY SSF48013 219 345 1.7E-24 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PGJ_RS04915 9f72b0dc89fd2142ed66eb03709a0cd6 348 Pfam PF01029 NusB family 198 338 2.0E-19 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PGJ_RS04915 9f72b0dc89fd2142ed66eb03709a0cd6 348 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 196 339 1.8E-26 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 PGJ_RS07445 7fcb23f5294755ac5f7bdfac4f38d31f 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 85 297 4.8E-64 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 PGJ_RS07445 7fcb23f5294755ac5f7bdfac4f38d31f 374 SUPERFAMILY SSF102405 90 299 7.1E-31 T 22-04-2016 PGJ_RS07445 7fcb23f5294755ac5f7bdfac4f38d31f 374 Gene3D G3DSA:3.40.50.450 125 296 1.1E-6 T 22-04-2016 PGJ_RS07445 7fcb23f5294755ac5f7bdfac4f38d31f 374 Pfam PF02481 DNA recombination-mediator protein A 83 290 5.7E-71 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 PGJ_RS07445 7fcb23f5294755ac5f7bdfac4f38d31f 374 PANTHER PTHR32039 43 371 1.3E-92 T 22-04-2016 PGJ_RS07445 7fcb23f5294755ac5f7bdfac4f38d31f 374 PANTHER PTHR32039:SF8 43 371 1.3E-92 T 22-04-2016 PGJ_RS04620 709714f010b997b45104a4485e02b2ba 361 Pfam PF05598 Transposase domain (DUF772) 59 133 1.1E-22 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS04620 709714f010b997b45104a4485e02b2ba 361 Pfam PF01609 Transposase DDE domain 143 348 1.8E-48 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS04620 709714f010b997b45104a4485e02b2ba 361 PANTHER PTHR35604 203 359 4.2E-31 T 22-04-2016 PGJ_RS04620 709714f010b997b45104a4485e02b2ba 361 PANTHER PTHR35604 12 177 4.2E-31 T 22-04-2016 PGJ_RS08530 07565beefb5ead0caac01a3ea97e05a3 208 SUPERFAMILY SSF47729 30 118 1.41E-7 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS08530 07565beefb5ead0caac01a3ea97e05a3 208 TIGRFAM TIGR01201 HU_rel: putative DNA-binding protein 1 196 4.8E-64 T 22-04-2016 IPR005902 Putative DNA-binding protein, HU-related PGJ_RS08530 07565beefb5ead0caac01a3ea97e05a3 208 Gene3D G3DSA:4.10.520.10 29 84 3.3E-5 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS02350 5f1628d7ba365e7d4b98f4375a7e2501 172 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 5 154 5.0E-16 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PGJ_RS09070 3c3d3a49ec2eacd6b0e6210f5ed545ce 131 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 16 91 3.3E-5 T 22-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 PGJ_RS09070 3c3d3a49ec2eacd6b0e6210f5ed545ce 131 SUPERFAMILY SSF55961 16 127 1.04E-13 T 22-04-2016 PGJ_RS09070 3c3d3a49ec2eacd6b0e6210f5ed545ce 131 Gene3D G3DSA:3.30.530.20 3 128 1.5E-13 T 22-04-2016 IPR023393 START-like domain PGJ_RS09540 4f8c46a4c5fe9bea1b0b18f8df41761d 224 PIRSF PIRSF004848 3 224 1.4E-70 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 PGJ_RS09540 4f8c46a4c5fe9bea1b0b18f8df41761d 224 Pfam PF01168 Alanine racemase, N-terminal domain 13 222 1.7E-20 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PGJ_RS09540 4f8c46a4c5fe9bea1b0b18f8df41761d 224 Gene3D G3DSA:3.20.20.10 16 224 3.4E-79 T 22-04-2016 IPR029066 PLP-binding barrel PGJ_RS09540 4f8c46a4c5fe9bea1b0b18f8df41761d 224 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 16 222 4.3E-53 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 PGJ_RS09540 4f8c46a4c5fe9bea1b0b18f8df41761d 224 SUPERFAMILY SSF51419 15 220 1.18E-70 T 22-04-2016 IPR029066 PLP-binding barrel PGJ_RS09540 4f8c46a4c5fe9bea1b0b18f8df41761d 224 PANTHER PTHR10146 16 224 1.5E-90 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 PGJ_RS09540 4f8c46a4c5fe9bea1b0b18f8df41761d 224 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 65 79 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 PGJ_RS07660 2e828ed73e7768543007524eda774a10 445 SUPERFAMILY SSF48317 43 233 2.62E-30 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PGJ_RS07660 2e828ed73e7768543007524eda774a10 445 Gene3D G3DSA:1.20.144.10 82 227 1.4E-28 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PGJ_RS07660 2e828ed73e7768543007524eda774a10 445 Pfam PF01569 PAP2 superfamily 153 227 5.4E-15 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PGJ_RS07660 2e828ed73e7768543007524eda774a10 445 SMART SM00014 124 225 2.5E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PGJ_RS05600 2c40f85f3a909628987d0c87aca2a7c9 761 SUPERFAMILY SSF56935 159 667 1.47E-17 T 22-04-2016 PGJ_RS05600 2c40f85f3a909628987d0c87aca2a7c9 761 Pfam PF14905 Outer membrane protein beta-barrel family 481 705 7.9E-14 T 22-04-2016 PGJ_RS05600 2c40f85f3a909628987d0c87aca2a7c9 761 Gene3D G3DSA:2.60.40.1120 21 82 6.7E-4 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS05600 2c40f85f3a909628987d0c87aca2a7c9 761 SUPERFAMILY SSF49464 22 88 4.12E-6 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS08145 7a128dbf830a5f0d1e3bf6da59f3ec7b 359 PANTHER PTHR35604 12 172 3.2E-25 T 22-04-2016 PGJ_RS08145 7a128dbf830a5f0d1e3bf6da59f3ec7b 359 PANTHER PTHR35604 201 357 3.2E-25 T 22-04-2016 PGJ_RS08145 7a128dbf830a5f0d1e3bf6da59f3ec7b 359 Pfam PF05598 Transposase domain (DUF772) 59 131 6.5E-17 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS08145 7a128dbf830a5f0d1e3bf6da59f3ec7b 359 Pfam PF01609 Transposase DDE domain 141 346 2.4E-47 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS01535 183c5a841a24faf28ed16cc1c21c6ddf 155 Pfam PF00216 Bacterial DNA-binding protein 36 85 7.7E-6 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PGJ_RS01535 183c5a841a24faf28ed16cc1c21c6ddf 155 Gene3D G3DSA:4.10.520.10 35 114 2.9E-7 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS01535 183c5a841a24faf28ed16cc1c21c6ddf 155 SUPERFAMILY SSF47729 33 120 2.5E-13 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS01535 183c5a841a24faf28ed16cc1c21c6ddf 155 TIGRFAM TIGR01201 HU_rel: putative DNA-binding protein 1 155 5.4E-52 T 22-04-2016 IPR005902 Putative DNA-binding protein, HU-related PGJ_RS09355 a3e1848d8a7ce2f495e87f2c476185aa 157 Pfam PF02590 Predicted SPOUT methyltransferase 1 155 1.2E-51 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS09355 a3e1848d8a7ce2f495e87f2c476185aa 157 SUPERFAMILY SSF75217 1 154 6.8E-46 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases PGJ_RS09355 a3e1848d8a7ce2f495e87f2c476185aa 157 Gene3D G3DSA:3.40.1280.10 1 156 1.8E-53 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PGJ_RS09355 a3e1848d8a7ce2f495e87f2c476185aa 157 PANTHER PTHR33603 1 156 1.9E-57 T 22-04-2016 PGJ_RS09355 a3e1848d8a7ce2f495e87f2c476185aa 157 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 156 26.784 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS09355 a3e1848d8a7ce2f495e87f2c476185aa 157 PANTHER PTHR33603:SF1 1 156 1.9E-57 T 22-04-2016 PGJ_RS09355 a3e1848d8a7ce2f495e87f2c476185aa 157 PIRSF PIRSF004505 1 156 1.3E-46 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.9E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.9E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.9E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.9E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.9E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.9E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.33 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 PANTHER PTHR11652 1 116 2.1E-74 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 PIRSF PIRSF002133 1 124 9.7E-56 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 SUPERFAMILY SSF50249 2 123 1.88E-53 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 Gene3D G3DSA:2.40.50.140 1 123 2.0E-66 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 Pfam PF00164 Ribosomal protein S12/S23 3 123 1.6E-44 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08410 18579209bf48d136ea64dafedcfa6448 134 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 4.5E-69 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PGJ_RS07835 b48f3f60b129e9e2dba7077790769408 158 Gene3D G3DSA:1.20.120.610 3 149 3.4E-25 T 22-04-2016 PGJ_RS07835 b48f3f60b129e9e2dba7077790769408 158 SUPERFAMILY SSF81333 81 150 1.11E-6 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PGJ_RS07835 b48f3f60b129e9e2dba7077790769408 158 SUPERFAMILY SSF81333 3 66 1.15E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PGJ_RS07835 b48f3f60b129e9e2dba7077790769408 158 Pfam PF00137 ATP synthase subunit C 8 66 8.2E-11 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PGJ_RS07835 b48f3f60b129e9e2dba7077790769408 158 Pfam PF00137 ATP synthase subunit C 90 148 4.4E-9 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PGJ_RS04765 4e052ab9d47e57ed9ff40f82dcbc54c4 458 Pfam PF13148 Protein of unknown function (DUF3987) 50 391 8.8E-59 T 22-04-2016 IPR025048 Protein of unknown function DUF3987) PGJ_RS07850 bed504e293e42386c1ea83b3dd911abc 254 SUPERFAMILY SSF52518 24 245 4.59E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS07850 bed504e293e42386c1ea83b3dd911abc 254 PANTHER PTHR18968 6 252 8.6E-110 T 22-04-2016 PGJ_RS07850 bed504e293e42386c1ea83b3dd911abc 254 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 59 218 2.1E-21 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PGJ_RS07850 bed504e293e42386c1ea83b3dd911abc 254 PANTHER PTHR18968:SF117 6 252 8.6E-110 T 22-04-2016 PGJ_RS07850 bed504e293e42386c1ea83b3dd911abc 254 Gene3D G3DSA:3.40.50.970 26 244 2.7E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold PGJ_RS02815 d2d4b31b78718c08edc62a411d4b2bf7 365 Gene3D G3DSA:3.40.50.720 2 195 3.2E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02815 d2d4b31b78718c08edc62a411d4b2bf7 365 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 342 8.5E-151 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS02815 d2d4b31b78718c08edc62a411d4b2bf7 365 Gene3D G3DSA:3.90.25.10 299 353 6.2E-49 T 22-04-2016 PGJ_RS02815 d2d4b31b78718c08edc62a411d4b2bf7 365 Gene3D G3DSA:3.90.25.10 198 252 6.2E-49 T 22-04-2016 PGJ_RS02815 d2d4b31b78718c08edc62a411d4b2bf7 365 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 352 55.812 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 PGJ_RS02815 d2d4b31b78718c08edc62a411d4b2bf7 365 PANTHER PTHR10366 305 362 1.5E-210 T 22-04-2016 PGJ_RS02815 d2d4b31b78718c08edc62a411d4b2bf7 365 PANTHER PTHR10366 5 287 1.5E-210 T 22-04-2016 PGJ_RS02815 d2d4b31b78718c08edc62a411d4b2bf7 365 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 348 4.3E-177 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 PGJ_RS02815 d2d4b31b78718c08edc62a411d4b2bf7 365 PANTHER PTHR10366:SF32 305 362 1.5E-210 T 22-04-2016 PGJ_RS02815 d2d4b31b78718c08edc62a411d4b2bf7 365 PANTHER PTHR10366:SF32 5 287 1.5E-210 T 22-04-2016 PGJ_RS02815 d2d4b31b78718c08edc62a411d4b2bf7 365 SUPERFAMILY SSF51735 4 346 1.51E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS04910 61352f7f08bedf892ed0f3f6add2a4c6 2499 Gene3D G3DSA:2.40.160.10 2343 2495 1.9E-4 T 22-04-2016 IPR023614 Porin domain PGJ_RS04910 61352f7f08bedf892ed0f3f6add2a4c6 2499 TIGRFAM TIGR04189 surface_SprA: cell surface protein SprA 72 2498 0.0 T 22-04-2016 IPR026377 Cell surface SprA PGJ_RS04910 61352f7f08bedf892ed0f3f6add2a4c6 2499 Pfam PF14349 Motility related/secretion protein 1093 1623 1.8E-210 T 22-04-2016 IPR025684 Gliding motility protein SprA N-terminal domain PGJ_RS04910 61352f7f08bedf892ed0f3f6add2a4c6 2499 Pfam PF14349 Motility related/secretion protein 77 372 2.8E-23 T 22-04-2016 IPR025684 Gliding motility protein SprA N-terminal domain PGJ_RS04270 d6e11bff53e5825493a974e75df1802f 166 PANTHER PTHR35604 5 134 1.3E-13 T 22-04-2016 PGJ_RS04270 d6e11bff53e5825493a974e75df1802f 166 Pfam PF05598 Transposase domain (DUF772) 34 107 5.5E-21 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS04895 d6e11bff53e5825493a974e75df1802f 166 PANTHER PTHR35604 5 134 1.3E-13 T 22-04-2016 PGJ_RS04895 d6e11bff53e5825493a974e75df1802f 166 Pfam PF05598 Transposase domain (DUF772) 34 107 5.5E-21 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 PANTHER PTHR12815 46 488 2.2E-114 T 22-04-2016 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 PANTHER PTHR12815 589 690 2.2E-114 T 22-04-2016 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 PANTHER PTHR12815 709 891 2.2E-114 T 22-04-2016 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 PANTHER PTHR12815 506 554 2.2E-114 T 22-04-2016 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 PANTHER PTHR12815:SF11 46 488 2.2E-114 T 22-04-2016 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 PANTHER PTHR12815:SF11 589 690 2.2E-114 T 22-04-2016 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 PANTHER PTHR12815:SF11 709 891 2.2E-114 T 22-04-2016 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 PANTHER PTHR12815:SF11 506 554 2.2E-114 T 22-04-2016 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 PIRSF PIRSF006076 10 891 2.2E-186 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 Pfam PF07244 Surface antigen variable number repeat 387 459 2.4E-9 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 Pfam PF07244 Surface antigen variable number repeat 203 299 4.8E-8 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 Pfam PF07244 Surface antigen variable number repeat 302 383 1.7E-17 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 Pfam PF07244 Surface antigen variable number repeat 46 119 7.6E-7 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 Pfam PF07244 Surface antigen variable number repeat 120 197 1.0E-7 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 Gene3D G3DSA:2.40.160.50 585 891 4.0E-44 T 22-04-2016 PGJ_RS00880 3d80f636dd5bc66f9d79f262b00463d0 891 Gene3D G3DSA:2.40.160.50 428 547 4.0E-44 T 22-04-2016 PGJ_RS03975 d453f8d2694429f0ff34e0cb215a113d 246 PANTHER PTHR30296:SF0 2 243 1.5E-108 T 22-04-2016 PGJ_RS03975 d453f8d2694429f0ff34e0cb215a113d 246 PANTHER PTHR30296 2 243 1.5E-108 T 22-04-2016 PGJ_RS03975 d453f8d2694429f0ff34e0cb215a113d 246 Pfam PF02754 Cysteine-rich domain 128 222 1.9E-10 T 22-04-2016 IPR004017 Cysteine-rich domain PGJ_RS03975 d453f8d2694429f0ff34e0cb215a113d 246 Pfam PF02754 Cysteine-rich domain 3 82 1.6E-13 T 22-04-2016 IPR004017 Cysteine-rich domain PGJ_RS00355 53806a069a42e34920bdb18ae378873a 260 Pfam PF13568 Outer membrane protein beta-barrel domain 21 235 2.1E-36 T 22-04-2016 IPR025665 Outer membrane protein beta-barrel domain PGJ_RS05370 8bcbfebf2502f7d1b894e6d37503604c 260 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 260 39.311 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 PGJ_RS05370 8bcbfebf2502f7d1b894e6d37503604c 260 PANTHER PTHR34148 2 260 3.9E-44 T 22-04-2016 PGJ_RS05370 8bcbfebf2502f7d1b894e6d37503604c 260 Pfam PF02654 Cobalamin-5-phosphate synthase 15 248 4.0E-44 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 PGJ_RS05370 8bcbfebf2502f7d1b894e6d37503604c 260 PANTHER PTHR34148:SF1 2 260 3.9E-44 T 22-04-2016 PGJ_RS08115 5213de22278ab4b0c2b1f4743b2cfe33 275 PANTHER PTHR37323 12 217 7.1E-12 T 22-04-2016 PGJ_RS08115 5213de22278ab4b0c2b1f4743b2cfe33 275 Pfam PF01553 Acyltransferase 68 191 1.6E-9 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PGJ_RS08115 5213de22278ab4b0c2b1f4743b2cfe33 275 PANTHER PTHR37323:SF1 12 217 7.1E-12 T 22-04-2016 PGJ_RS08115 5213de22278ab4b0c2b1f4743b2cfe33 275 SUPERFAMILY SSF69593 60 197 1.24E-8 T 22-04-2016 PGJ_RS08115 5213de22278ab4b0c2b1f4743b2cfe33 275 SMART SM00563 79 196 3.5E-9 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PGJ_RS00620 5c9da31c7737023241dd5d6e5e3423db 258 Gene3D G3DSA:3.40.50.150 3 191 2.9E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS00620 5c9da31c7737023241dd5d6e5e3423db 258 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 36 63 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 PGJ_RS00620 5c9da31c7737023241dd5d6e5e3423db 258 SMART SM00650 20 191 2.5E-56 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 PGJ_RS00620 5c9da31c7737023241dd5d6e5e3423db 258 PANTHER PTHR11727 1 258 1.4E-72 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PGJ_RS00620 5c9da31c7737023241dd5d6e5e3423db 258 Gene3D G3DSA:1.10.8.100 196 256 1.7E-16 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like PGJ_RS00620 5c9da31c7737023241dd5d6e5e3423db 258 SUPERFAMILY SSF53335 4 255 6.43E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS00620 5c9da31c7737023241dd5d6e5e3423db 258 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 4 257 48.035 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PGJ_RS00620 5c9da31c7737023241dd5d6e5e3423db 258 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 4 254 1.8E-79 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PGJ_RS00620 5c9da31c7737023241dd5d6e5e3423db 258 Pfam PF00398 Ribosomal RNA adenine dimethylase 5 229 6.3E-44 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PGJ_RS06755 38989aa0e21275d39d1dc6ec4dcaa44b 244 Gene3D G3DSA:3.30.420.40 89 243 4.8E-41 T 22-04-2016 PGJ_RS06755 38989aa0e21275d39d1dc6ec4dcaa44b 244 SUPERFAMILY SSF53067 4 109 2.81E-9 T 22-04-2016 PGJ_RS06755 38989aa0e21275d39d1dc6ec4dcaa44b 244 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 5 240 1.4E-29 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 PGJ_RS06755 38989aa0e21275d39d1dc6ec4dcaa44b 244 Hamap MF_01274 Type III pantothenate kinase [coaX]. 3 244 20.839 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 PGJ_RS06755 38989aa0e21275d39d1dc6ec4dcaa44b 244 SUPERFAMILY SSF53067 112 243 3.24E-31 T 22-04-2016 PGJ_RS06755 38989aa0e21275d39d1dc6ec4dcaa44b 244 Pfam PF03309 Type III pantothenate kinase 5 196 3.4E-40 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 PGJ_RS06755 38989aa0e21275d39d1dc6ec4dcaa44b 244 PANTHER PTHR34265 75 244 1.6E-39 T 22-04-2016 PGJ_RS00530 3ecf122176f7f75ab25c9fc125676ca5 145 PIRSF PIRSF000441 1 144 8.1E-40 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 PGJ_RS00530 3ecf122176f7f75ab25c9fc125676ca5 145 PANTHER PTHR23416:SF55 2 144 2.9E-32 T 22-04-2016 PGJ_RS00530 3ecf122176f7f75ab25c9fc125676ca5 145 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 89 121 7.7E-5 T 22-04-2016 IPR001451 Hexapeptide repeat PGJ_RS00530 3ecf122176f7f75ab25c9fc125676ca5 145 SUPERFAMILY SSF51161 3 139 7.35E-34 T 22-04-2016 IPR011004 Trimeric LpxA-like PGJ_RS00530 3ecf122176f7f75ab25c9fc125676ca5 145 Gene3D G3DSA:2.160.10.10 22 139 1.3E-25 T 22-04-2016 PGJ_RS00530 3ecf122176f7f75ab25c9fc125676ca5 145 PANTHER PTHR23416 2 144 2.9E-32 T 22-04-2016 PGJ_RS01035 f655124031c8877981e4dd174e7ab642 880 SUPERFAMILY SSF49464 23 101 1.41E-5 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS01035 f655124031c8877981e4dd174e7ab642 880 Gene3D G3DSA:2.60.40.1120 25 128 1.2E-4 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS01035 f655124031c8877981e4dd174e7ab642 880 SUPERFAMILY SSF56935 326 435 5.27E-8 T 22-04-2016 PGJ_RS01035 f655124031c8877981e4dd174e7ab642 880 SUPERFAMILY SSF56935 510 575 5.27E-8 T 22-04-2016 PGJ_RS01035 f655124031c8877981e4dd174e7ab642 880 SUPERFAMILY SSF56935 114 291 5.27E-8 T 22-04-2016 PGJ_RS01035 f655124031c8877981e4dd174e7ab642 880 SUPERFAMILY SSF56935 620 880 5.27E-8 T 22-04-2016 PGJ_RS00350 75727490c6611dc8117e5ef0542ee3da 300 Pfam PF13201 Putative carbohydrate metabolism domain 63 293 9.0E-55 T 22-04-2016 IPR025112 Putative carbohydrate metabolism domain PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 SMART SM00490 256 337 9.3E-31 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 Gene3D G3DSA:3.40.50.300 210 369 3.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 Gene3D G3DSA:3.40.50.300 1 209 2.7E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 PANTHER PTHR24031 1 448 1.2E-202 T 22-04-2016 PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 PANTHER PTHR24031 505 603 1.2E-202 T 22-04-2016 PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 SUPERFAMILY SSF52540 71 357 1.2E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 Pfam PF00271 Helicase conserved C-terminal domain 246 337 1.1E-25 T 22-04-2016 IPR001650 Helicase, C-terminal PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 Gene3D G3DSA:3.30.70.330 516 553 4.8E-4 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 Pfam PF00270 DEAD/DEAH box helicase 27 194 5.0E-46 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 SMART SM00487 21 220 7.3E-60 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 SUPERFAMILY SSF54928 516 569 2.36E-5 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 PANTHER PTHR24031:SF261 1 448 1.2E-202 T 22-04-2016 PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 PANTHER PTHR24031:SF261 505 603 1.2E-202 T 22-04-2016 PGJ_RS00370 ed344fb05f503336fce10407317028c3 604 Pfam PF03880 DbpA RNA binding domain 471 540 1.5E-16 T 22-04-2016 IPR005580 DbpA, RNA-binding domain PGJ_RS07385 b2f61630f47e2a135ed8a9794920e172 179 Pfam PF00881 Nitroreductase family 16 72 6.8E-18 T 22-04-2016 IPR029479 Nitroreductase PGJ_RS07385 b2f61630f47e2a135ed8a9794920e172 179 PANTHER PTHR23026 11 178 1.8E-42 T 22-04-2016 PGJ_RS07385 b2f61630f47e2a135ed8a9794920e172 179 SUPERFAMILY SSF55469 12 178 4.32E-52 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PGJ_RS07385 b2f61630f47e2a135ed8a9794920e172 179 Gene3D G3DSA:3.40.109.10 11 178 1.7E-52 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 PGJ_RS01135 c5f4d84d639449ae161a999407eaaab9 619 PANTHER PTHR18866 356 477 2.4E-154 T 22-04-2016 PGJ_RS01135 c5f4d84d639449ae161a999407eaaab9 619 PANTHER PTHR18866 60 311 2.4E-154 T 22-04-2016 PGJ_RS01135 c5f4d84d639449ae161a999407eaaab9 619 Pfam PF02436 Conserved carboxylase domain 343 473 4.9E-16 T 22-04-2016 IPR003379 Carboxylase, conserved domain PGJ_RS01135 c5f4d84d639449ae161a999407eaaab9 619 SUPERFAMILY SSF51569 5 282 7.03E-50 T 22-04-2016 PGJ_RS01135 c5f4d84d639449ae161a999407eaaab9 619 Pfam PF00682 HMGL-like 125 265 7.6E-14 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PGJ_RS01135 c5f4d84d639449ae161a999407eaaab9 619 SUPERFAMILY SSF89000 302 473 2.51E-23 T 22-04-2016 PGJ_RS01135 c5f4d84d639449ae161a999407eaaab9 619 PANTHER PTHR18866:SF33 356 477 2.4E-154 T 22-04-2016 PGJ_RS01135 c5f4d84d639449ae161a999407eaaab9 619 PANTHER PTHR18866:SF33 60 311 2.4E-154 T 22-04-2016 PGJ_RS01135 c5f4d84d639449ae161a999407eaaab9 619 Gene3D G3DSA:3.20.20.70 9 278 2.2E-66 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS01410 bf6a44716d3760e83ec54cea21a050f2 371 SUPERFAMILY SSF52833 234 370 1.18E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS01410 bf6a44716d3760e83ec54cea21a050f2 371 Pfam PF00578 AhpC/TSA family 236 353 7.1E-21 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PGJ_RS01410 bf6a44716d3760e83ec54cea21a050f2 371 Pfam PF14289 Domain of unknown function (DUF4369) 29 130 7.3E-21 T 22-04-2016 IPR025380 Domain of unknown function DUF4369 PGJ_RS01410 bf6a44716d3760e83ec54cea21a050f2 371 PANTHER PTHR13871 234 357 1.9E-27 T 22-04-2016 PGJ_RS01410 bf6a44716d3760e83ec54cea21a050f2 371 Gene3D G3DSA:3.40.30.10 231 370 8.4E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS01410 bf6a44716d3760e83ec54cea21a050f2 371 Gene3D G3DSA:3.40.30.10 11 38 8.4E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS00270 451a8184910fcfdc6de74c1aad2bd3d9 392 Pfam PF02321 Outer membrane efflux protein 24 198 1.8E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS00270 451a8184910fcfdc6de74c1aad2bd3d9 392 Pfam PF02321 Outer membrane efflux protein 222 388 1.4E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PGJ_RS00270 451a8184910fcfdc6de74c1aad2bd3d9 392 Gene3D G3DSA:1.20.1600.10 24 388 3.6E-34 T 22-04-2016 PGJ_RS00270 451a8184910fcfdc6de74c1aad2bd3d9 392 SUPERFAMILY SSF56954 1 388 5.49E-43 T 22-04-2016 PGJ_RS00270 451a8184910fcfdc6de74c1aad2bd3d9 392 PANTHER PTHR30203 1 387 5.0E-23 T 22-04-2016 PGJ_RS09770 5b40904fd6ca539d96052346b75ad927 290 Gene3D G3DSA:2.60.40.320 165 288 4.0E-37 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 PGJ_RS09770 5b40904fd6ca539d96052346b75ad927 290 Pfam PF11551 Outer membrane protein Omp28 113 286 2.7E-22 T 22-04-2016 IPR021615 Outer membrane protein Omp28 PGJ_RS09770 5b40904fd6ca539d96052346b75ad927 290 Gene3D G3DSA:3.40.30.10 1 98 4.0E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS08270 9fadb7b395074b444e3a58342bebe1c4 128 SUPERFAMILY SSF53137 16 128 1.44E-44 T 22-04-2016 PGJ_RS08270 9fadb7b395074b444e3a58342bebe1c4 128 Pfam PF00411 Ribosomal protein S11 18 127 1.5E-43 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08270 9fadb7b395074b444e3a58342bebe1c4 128 ProSitePatterns PS00054 Ribosomal protein S11 signature. 96 118 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site PGJ_RS08270 9fadb7b395074b444e3a58342bebe1c4 128 Gene3D G3DSA:3.30.420.80 6 128 1.1E-48 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08270 9fadb7b395074b444e3a58342bebe1c4 128 PANTHER PTHR11759 18 128 9.8E-56 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08270 9fadb7b395074b444e3a58342bebe1c4 128 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 125 5.4E-53 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08270 9fadb7b395074b444e3a58342bebe1c4 128 PIRSF PIRSF002131 1 128 1.2E-49 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PGJ_RS08270 9fadb7b395074b444e3a58342bebe1c4 128 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 128 30.704 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PGJ_RS09780 723a33a42fce9e1b0760ebeb500a741d 160 Pfam PF00578 AhpC/TSA family 20 138 2.7E-21 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PGJ_RS09780 723a33a42fce9e1b0760ebeb500a741d 160 Gene3D G3DSA:3.40.30.10 17 160 2.2E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS09780 723a33a42fce9e1b0760ebeb500a741d 160 PANTHER PTHR10681 21 142 1.0E-18 T 22-04-2016 PGJ_RS09780 723a33a42fce9e1b0760ebeb500a741d 160 PANTHER PTHR10681:SF107 21 142 1.0E-18 T 22-04-2016 PGJ_RS09780 723a33a42fce9e1b0760ebeb500a741d 160 SUPERFAMILY SSF52833 19 159 2.61E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS08840 c556345f9517eebc395e41b43d0e8abe 292 TIGRFAM TIGR01200 GLPGLI: GLPGLI family protein 7 256 1.2E-47 T 22-04-2016 IPR005901 GLPGLI family protein PGJ_RS03835 ed40628a71d6afe5e87db29bc2328f6d 286 PANTHER PTHR22916 12 147 1.2E-62 T 22-04-2016 PGJ_RS03835 ed40628a71d6afe5e87db29bc2328f6d 286 PANTHER PTHR22916 172 260 1.2E-62 T 22-04-2016 PGJ_RS03835 ed40628a71d6afe5e87db29bc2328f6d 286 SUPERFAMILY SSF53448 8 267 1.93E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS03835 ed40628a71d6afe5e87db29bc2328f6d 286 Pfam PF00535 Glycosyl transferase family 2 12 193 6.2E-11 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PGJ_RS03835 ed40628a71d6afe5e87db29bc2328f6d 286 Gene3D G3DSA:3.90.550.10 12 265 2.2E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS03835 ed40628a71d6afe5e87db29bc2328f6d 286 PANTHER PTHR22916:SF16 12 147 1.2E-62 T 22-04-2016 PGJ_RS03835 ed40628a71d6afe5e87db29bc2328f6d 286 PANTHER PTHR22916:SF16 172 260 1.2E-62 T 22-04-2016 PGJ_RS03445 d56f63112ec6e732bb466af473b8e10c 254 Gene3D G3DSA:2.50.20.10 14 251 2.7E-80 T 22-04-2016 PGJ_RS03445 d56f63112ec6e732bb466af473b8e10c 254 Pfam PF17131 Outer membrane lipoprotein-sorting protein 66 251 1.9E-68 T 22-04-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein PGJ_RS09740 86b4786f847fdcd9b8873914e336b860 197 SUPERFAMILY SSF103515 108 192 7.98E-6 T 22-04-2016 IPR005546 Autotransporter beta-domain PGJ_RS09740 86b4786f847fdcd9b8873914e336b860 197 Pfam PF12099 Protein of unknown function (DUF3575) 6 196 3.1E-70 T 22-04-2016 IPR021958 Protein of unknown function DUF3575 PGJ_RS09740 86b4786f847fdcd9b8873914e336b860 197 Gene3D G3DSA:2.40.128.130 124 166 5.6E-4 T 22-04-2016 IPR005546 Autotransporter beta-domain PGJ_RS06085 07d0c47e90a40c9303871813fa01d554 117 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 2.2E-25 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS06085 07d0c47e90a40c9303871813fa01d554 117 Gene3D G3DSA:3.30.70.60 1 100 8.8E-36 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PGJ_RS06085 07d0c47e90a40c9303871813fa01d554 117 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 19.668 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS06085 07d0c47e90a40c9303871813fa01d554 117 PANTHER PTHR21011 1 107 1.1E-32 T 22-04-2016 PGJ_RS06085 07d0c47e90a40c9303871813fa01d554 117 Pfam PF01250 Ribosomal protein S6 3 92 1.1E-31 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS06085 07d0c47e90a40c9303871813fa01d554 117 SUPERFAMILY SSF54995 1 98 2.35E-34 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PGJ_RS01815 1ebe7ac168f957ae05f4dae65ed9fca9 383 PANTHER PTHR35806 2 383 1.7E-185 T 22-04-2016 PGJ_RS01815 1ebe7ac168f957ae05f4dae65ed9fca9 383 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 27 377 7.9E-146 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PGJ_RS01815 1ebe7ac168f957ae05f4dae65ed9fca9 383 PIRSF PIRSF015658 5 383 2.7E-164 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PGJ_RS01815 1ebe7ac168f957ae05f4dae65ed9fca9 383 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 28 381 2.6E-152 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PGJ_RS08275 042a9fc73e19ab0922fda2207fb4f1ab 126 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 2 121 27.096 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08275 042a9fc73e19ab0922fda2207fb4f1ab 126 SUPERFAMILY SSF46946 3 116 5.89E-43 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PGJ_RS08275 042a9fc73e19ab0922fda2207fb4f1ab 126 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 4 116 8.6E-52 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08275 042a9fc73e19ab0922fda2207fb4f1ab 126 PIRSF PIRSF002134 1 126 1.5E-40 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08275 042a9fc73e19ab0922fda2207fb4f1ab 126 ProSitePatterns PS00646 Ribosomal protein S13 signature. 89 102 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 PGJ_RS08275 042a9fc73e19ab0922fda2207fb4f1ab 126 Pfam PF00416 Ribosomal protein S13/S18 4 110 1.3E-30 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08275 042a9fc73e19ab0922fda2207fb4f1ab 126 Gene3D G3DSA:4.10.910.10 74 125 1.6E-27 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal PGJ_RS08275 042a9fc73e19ab0922fda2207fb4f1ab 126 Gene3D G3DSA:1.10.8.50 3 72 1.1E-27 T 22-04-2016 PGJ_RS08275 042a9fc73e19ab0922fda2207fb4f1ab 126 PANTHER PTHR10871 4 124 1.3E-65 T 22-04-2016 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 SUPERFAMILY SSF52156 762 886 9.29E-36 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 403 454 8.8E-12 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 Pfam PF00009 Elongation factor Tu GTP binding domain 483 639 5.2E-31 T 22-04-2016 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 397 979 6.6E-238 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 Gene3D G3DSA:2.40.30.10 881 977 7.1E-36 T 22-04-2016 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 ProSitePatterns PS01176 Initiation factor 2 signature. 930 952 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 2 977 16.896 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 SUPERFAMILY SSF50447 652 734 1.68E-21 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 PANTHER PTHR23115 832 975 2.9E-190 T 22-04-2016 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 PANTHER PTHR23115 463 807 2.9E-190 T 22-04-2016 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 PANTHER PTHR23115:SF184 832 975 2.9E-190 T 22-04-2016 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 PANTHER PTHR23115:SF184 463 807 2.9E-190 T 22-04-2016 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 Gene3D G3DSA:3.40.50.10050 779 858 6.4E-24 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 SUPERFAMILY SSF50447 881 977 6.03E-32 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 Gene3D G3DSA:3.40.50.300 471 638 1.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 Gene3D G3DSA:2.40.30.10 650 744 7.7E-20 T 22-04-2016 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 Pfam PF11987 Translation-initiation factor 2 771 869 2.7E-34 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 482 638 1.6E-28 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS01155 f261399fa66c30d566172dd5a308e5c2 979 SUPERFAMILY SSF52540 471 652 3.64E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09150 0d0d7c717edbc9d732870040b6d31f57 761 SUPERFAMILY SSF52540 142 419 1.49E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09150 0d0d7c717edbc9d732870040b6d31f57 761 Gene3D G3DSA:1.10.10.10 654 687 5.8E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS09150 0d0d7c717edbc9d732870040b6d31f57 761 Gene3D G3DSA:3.40.50.300 360 409 3.1E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09150 0d0d7c717edbc9d732870040b6d31f57 761 Gene3D G3DSA:3.40.50.300 154 264 3.1E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09150 0d0d7c717edbc9d732870040b6d31f57 761 Pfam PF14493 Helix-turn-helix domain 649 736 3.7E-19 T 22-04-2016 IPR029491 Helicase Helix-turn-helix domain PGJ_RS09150 0d0d7c717edbc9d732870040b6d31f57 761 PANTHER PTHR23274 5 418 3.0E-101 T 22-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 PGJ_RS09150 0d0d7c717edbc9d732870040b6d31f57 761 Gene3D G3DSA:3.40.50.300 11 153 8.2E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09150 0d0d7c717edbc9d732870040b6d31f57 761 SUPERFAMILY SSF52540 8 71 9.24E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09150 0d0d7c717edbc9d732870040b6d31f57 761 SUPERFAMILY SSF52540 98 217 9.24E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS09150 0d0d7c717edbc9d732870040b6d31f57 761 Pfam PF05970 PIF1-like helicase 12 174 1.7E-23 T 22-04-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 PGJ_RS01580 ec67068fcee84e1dffc79ff29cb95446 424 Pfam PF12704 MacB-like periplasmic core domain 21 211 1.9E-16 T 22-04-2016 IPR025857 MacB-like periplasmic core domain PGJ_RS01580 ec67068fcee84e1dffc79ff29cb95446 424 PANTHER PTHR30572 12 424 1.9E-58 T 22-04-2016 PGJ_RS01580 ec67068fcee84e1dffc79ff29cb95446 424 Pfam PF02687 FtsX-like permease family 289 416 8.3E-21 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS06050 68ba2e669ce444e08ec31da5e3ba17f5 289 PANTHER PTHR30426 1 288 1.0E-85 T 22-04-2016 PGJ_RS06050 68ba2e669ce444e08ec31da5e3ba17f5 289 Pfam PF02401 LytB protein 6 285 1.1E-73 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 PGJ_RS06050 68ba2e669ce444e08ec31da5e3ba17f5 289 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 8 287 3.0E-58 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 PGJ_RS06050 68ba2e669ce444e08ec31da5e3ba17f5 289 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 2 289 26.614 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 PGJ_RS09825 a6e11a76cb9269f746afadbb8dea8c85 122 PIRSF PIRSF019455 1 122 3.0E-22 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 PGJ_RS09825 a6e11a76cb9269f746afadbb8dea8c85 122 PANTHER PTHR34134 1 122 1.8E-27 T 22-04-2016 PGJ_RS09825 a6e11a76cb9269f746afadbb8dea8c85 122 Pfam PF03965 Penicillinase repressor 4 116 5.1E-25 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 PGJ_RS09825 a6e11a76cb9269f746afadbb8dea8c85 122 PANTHER PTHR34134:SF1 1 122 1.8E-27 T 22-04-2016 PGJ_RS09825 a6e11a76cb9269f746afadbb8dea8c85 122 Gene3D G3DSA:1.10.10.10 2 76 4.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS09825 a6e11a76cb9269f746afadbb8dea8c85 122 SUPERFAMILY SSF46785 3 119 9.25E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS05690 5dd26a6032b50b264ab34a58184f2526 363 TIGRFAM TIGR03782 Bac_Flav_CT_J: Bacteroides conjugative transposon TraJ protein 4 324 5.2E-170 T 22-04-2016 IPR022393 Conjugative transposon, TraJ PGJ_RS05690 5dd26a6032b50b264ab34a58184f2526 363 Pfam PF07863 Homologues of TraJ from Bacteroides conjugative transposon 273 328 1.1E-13 T 22-04-2016 IPR012424 Conjugative transposon, TraJ, C-terminal PGJ_RS01370 bfa6158b956fdd5925dde0acc4058289 781 Gene3D G3DSA:3.30.2080.10 616 763 3.6E-57 T 22-04-2016 PGJ_RS01370 bfa6158b956fdd5925dde0acc4058289 781 Gene3D G3DSA:2.70.98.10 28 335 4.9E-88 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PGJ_RS01370 bfa6158b956fdd5925dde0acc4058289 781 SUPERFAMILY SSF48208 278 739 1.56E-37 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PGJ_RS01370 bfa6158b956fdd5925dde0acc4058289 781 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 3 756 0.0 T 22-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- PGJ_RS01370 bfa6158b956fdd5925dde0acc4058289 781 PANTHER PTHR12143 130 776 0.0 T 22-04-2016 PGJ_RS01370 bfa6158b956fdd5925dde0acc4058289 781 PANTHER PTHR12143 5 111 0.0 T 22-04-2016 PGJ_RS01370 bfa6158b956fdd5925dde0acc4058289 781 Pfam PF07971 Glycosyl hydrolase family 92 256 751 6.1E-155 T 22-04-2016 IPR012939 Glycosyl hydrolase family 92 PGJ_RS01370 bfa6158b956fdd5925dde0acc4058289 781 PANTHER PTHR12143:SF22 130 776 0.0 T 22-04-2016 PGJ_RS01370 bfa6158b956fdd5925dde0acc4058289 781 PANTHER PTHR12143:SF22 5 111 0.0 T 22-04-2016 PGJ_RS01370 bfa6158b956fdd5925dde0acc4058289 781 Gene3D G3DSA:1.20.1610.10 456 615 2.3E-62 T 22-04-2016 PGJ_RS01370 bfa6158b956fdd5925dde0acc4058289 781 Gene3D G3DSA:1.20.1050.60 362 451 1.4E-27 T 22-04-2016 PGJ_RS07810 535caa5a1a8647527c4359a64f877237 312 Pfam PF10962 Protein of unknown function (DUF2764) 1 299 1.6E-120 T 22-04-2016 IPR024492 Protein of unknown function DUF2764 PGJ_RS07810 535caa5a1a8647527c4359a64f877237 312 ProDom PD181473 CT309 TC0583 CPN0087/CP0687/CPJ0087/CPB0087 153 293 4.0E-78 T 22-04-2016 PGJ_RS00920 af5ad0fd86cff90a4091cc9793ed5fd2 248 Gene3D G3DSA:3.40.50.10090 13 134 2.2E-17 T 22-04-2016 PGJ_RS00920 af5ad0fd86cff90a4091cc9793ed5fd2 248 Gene3D G3DSA:3.40.50.10090 138 247 8.8E-18 T 22-04-2016 PGJ_RS00920 af5ad0fd86cff90a4091cc9793ed5fd2 248 PANTHER PTHR12390 1 248 8.4E-24 T 22-04-2016 PGJ_RS00920 af5ad0fd86cff90a4091cc9793ed5fd2 248 Pfam PF02602 Uroporphyrinogen-III synthase HemD 26 234 5.6E-36 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PGJ_RS00920 af5ad0fd86cff90a4091cc9793ed5fd2 248 SUPERFAMILY SSF69618 6 245 9.42E-47 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PGJ_RS03395 3093ba38c1c97ad6c7e94e5db8fd7b96 382 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 237 246 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PGJ_RS03395 3093ba38c1c97ad6c7e94e5db8fd7b96 382 SUPERFAMILY SSF53383 13 381 1.53E-85 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS03395 3093ba38c1c97ad6c7e94e5db8fd7b96 382 Pfam PF00155 Aminotransferase class I and II 37 379 1.4E-49 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PGJ_RS03395 3093ba38c1c97ad6c7e94e5db8fd7b96 382 Gene3D G3DSA:3.90.1150.10 271 376 1.5E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS03395 3093ba38c1c97ad6c7e94e5db8fd7b96 382 PANTHER PTHR13693:SF59 1 381 4.6E-163 T 22-04-2016 PGJ_RS03395 3093ba38c1c97ad6c7e94e5db8fd7b96 382 PANTHER PTHR13693 1 381 4.6E-163 T 22-04-2016 PGJ_RS03395 3093ba38c1c97ad6c7e94e5db8fd7b96 382 Gene3D G3DSA:3.40.640.10 71 270 2.7E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS08750 325243b6b6b6a05a613fdbdf982a1ddf 337 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 43 319 5.5E-34 T 22-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PGJ_RS03825 121ff6733a121ec9d58ff77736e842e3 374 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 11 366 5.7E-115 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PGJ_RS03825 121ff6733a121ec9d58ff77736e842e3 374 PANTHER PTHR30244:SF15 1 373 1.4E-104 T 22-04-2016 PGJ_RS03825 121ff6733a121ec9d58ff77736e842e3 374 PIRSF PIRSF000390 1 372 1.3E-102 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PGJ_RS03825 121ff6733a121ec9d58ff77736e842e3 374 Gene3D G3DSA:3.90.1150.10 247 369 4.7E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS03825 121ff6733a121ec9d58ff77736e842e3 374 SUPERFAMILY SSF53383 10 369 2.3E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS03825 121ff6733a121ec9d58ff77736e842e3 374 Gene3D G3DSA:3.40.640.10 10 245 6.1E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS03825 121ff6733a121ec9d58ff77736e842e3 374 PANTHER PTHR30244 1 373 1.4E-104 T 22-04-2016 PGJ_RS05280 06f0421f1ec3cb52e748305fc1537264 208 SUPERFAMILY SSF56784 3 198 4.63E-30 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS05280 06f0421f1ec3cb52e748305fc1537264 208 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 129 188 3.5E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PGJ_RS05280 06f0421f1ec3cb52e748305fc1537264 208 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 1.1E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PGJ_RS05280 06f0421f1ec3cb52e748305fc1537264 208 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 1.1E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PGJ_RS05280 06f0421f1ec3cb52e748305fc1537264 208 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.1E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PGJ_RS05280 06f0421f1ec3cb52e748305fc1537264 208 Gene3D G3DSA:3.40.50.1000 82 203 2.1E-27 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS05280 06f0421f1ec3cb52e748305fc1537264 208 PANTHER PTHR12725:SF63 2 207 2.8E-29 T 22-04-2016 PGJ_RS05280 06f0421f1ec3cb52e748305fc1537264 208 Pfam PF13419 Haloacid dehalogenase-like hydrolase 129 187 6.8E-9 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS05280 06f0421f1ec3cb52e748305fc1537264 208 PANTHER PTHR12725 2 207 2.8E-29 T 22-04-2016 PGJ_RS05280 06f0421f1ec3cb52e748305fc1537264 208 Gene3D G3DSA:1.10.150.240 14 81 9.5E-28 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PGJ_RS07465 b199764f061e00f5afdcedb58fc64e15 185 PANTHER PTHR33567 2 180 2.0E-77 T 22-04-2016 PGJ_RS07465 b199764f061e00f5afdcedb58fc64e15 185 Pfam PF02417 Chromate transporter 6 170 8.5E-48 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 PGJ_RS07465 b199764f061e00f5afdcedb58fc64e15 185 PANTHER PTHR33567:SF2 2 180 2.0E-77 T 22-04-2016 PGJ_RS06610 eef450b0bfb27e288738101f49ad6df8 335 Pfam PF07949 YbbR-like protein 158 236 1.2E-8 T 22-04-2016 IPR012505 YbbR-like PGJ_RS07515 1800c9a963bd2349d5480d52f40bb1d3 458 Pfam PF02687 FtsX-like permease family 327 450 4.5E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS07515 1800c9a963bd2349d5480d52f40bb1d3 458 Pfam PF12704 MacB-like periplasmic core domain 48 279 4.9E-16 T 22-04-2016 IPR025857 MacB-like periplasmic core domain PGJ_RS07515 1800c9a963bd2349d5480d52f40bb1d3 458 PANTHER PTHR30572:SF6 28 458 1.2E-39 T 22-04-2016 PGJ_RS07515 1800c9a963bd2349d5480d52f40bb1d3 458 PANTHER PTHR30572 28 458 1.2E-39 T 22-04-2016 PGJ_RS03175 b8430d1b93ca4219f7b6b5fba0f990ce 98 Pfam PF11888 Protein of unknown function (DUF3408) 3 94 1.7E-25 T 22-04-2016 IPR021823 Protein of unknown function DUF3408 PGJ_RS00550 6e8dd21837e62b03f5a87f1f0176bae2 368 PANTHER PTHR18964:SF2 205 368 1.0E-189 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 PGJ_RS00550 6e8dd21837e62b03f5a87f1f0176bae2 368 PANTHER PTHR18964:SF2 1 186 1.0E-189 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 PGJ_RS00550 6e8dd21837e62b03f5a87f1f0176bae2 368 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 368 2.1E-115 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain PGJ_RS00550 6e8dd21837e62b03f5a87f1f0176bae2 368 SUPERFAMILY SSF53756 1 368 4.89E-127 T 22-04-2016 PGJ_RS00550 6e8dd21837e62b03f5a87f1f0176bae2 368 Gene3D G3DSA:3.40.50.2000 220 358 3.2E-54 T 22-04-2016 PGJ_RS00550 6e8dd21837e62b03f5a87f1f0176bae2 368 Gene3D G3DSA:3.40.50.2000 1 219 1.1E-89 T 22-04-2016 PGJ_RS00550 6e8dd21837e62b03f5a87f1f0176bae2 368 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 368 2.0E-147 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 PGJ_RS00550 6e8dd21837e62b03f5a87f1f0176bae2 368 PANTHER PTHR18964 205 368 1.0E-189 T 22-04-2016 PGJ_RS00550 6e8dd21837e62b03f5a87f1f0176bae2 368 PANTHER PTHR18964 1 186 1.0E-189 T 22-04-2016 PGJ_RS07615 e089b6c61dde85cf269cc7e59e5d9d00 78 Pfam PF00550 Phosphopantetheine attachment site 7 73 2.3E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain PGJ_RS07615 e089b6c61dde85cf269cc7e59e5d9d00 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 5.7E-32 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PGJ_RS07615 e089b6c61dde85cf269cc7e59e5d9d00 78 SUPERFAMILY SSF47336 1 77 1.44E-22 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain PGJ_RS07615 e089b6c61dde85cf269cc7e59e5d9d00 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 20.922 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PGJ_RS07615 e089b6c61dde85cf269cc7e59e5d9d00 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 6.0E-15 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PGJ_RS07615 e089b6c61dde85cf269cc7e59e5d9d00 78 PANTHER PTHR20863 3 76 3.0E-26 T 22-04-2016 PGJ_RS07615 e089b6c61dde85cf269cc7e59e5d9d00 78 Gene3D G3DSA:1.10.1200.10 3 77 1.9E-31 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain PGJ_RS07520 6e5aeca53cccceb993bd09a6c0538038 442 Pfam PF02687 FtsX-like permease family 319 435 2.6E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS07520 6e5aeca53cccceb993bd09a6c0538038 442 PANTHER PTHR30572 318 442 2.6E-15 T 22-04-2016 PGJ_RS07410 5df23e20904a260fb57dbba6ff012be4 327 PANTHER PTHR30578:SF0 1 327 1.6E-120 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 PGJ_RS07410 5df23e20904a260fb57dbba6ff012be4 327 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 10 323 1.1E-128 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 PGJ_RS07410 5df23e20904a260fb57dbba6ff012be4 327 PANTHER PTHR30578 1 327 1.6E-120 T 22-04-2016 PGJ_RS07410 5df23e20904a260fb57dbba6ff012be4 327 Pfam PF03116 NQR2, RnfD, RnfE family 7 323 5.4E-115 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 PGJ_RS07410 5df23e20904a260fb57dbba6ff012be4 327 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 5 325 25.359 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 PGJ_RS03860 7ae4cf75fe44dab961a4f8ce2f854d25 319 SUPERFAMILY SSF75620 1 317 1.96E-103 T 22-04-2016 PGJ_RS03860 7ae4cf75fe44dab961a4f8ce2f854d25 319 Gene3D G3DSA:3.30.160.200 168 254 2.0E-24 T 22-04-2016 PGJ_RS03860 7ae4cf75fe44dab961a4f8ce2f854d25 319 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 187 203 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PGJ_RS03860 7ae4cf75fe44dab961a4f8ce2f854d25 319 Pfam PF00472 RF-1 domain 171 287 2.2E-31 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PGJ_RS03860 7ae4cf75fe44dab961a4f8ce2f854d25 319 SMART SM00937 33 137 3.7E-34 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PGJ_RS03860 7ae4cf75fe44dab961a4f8ce2f854d25 319 Pfam PF03462 PCRF domain 1 162 3.4E-46 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PGJ_RS03860 7ae4cf75fe44dab961a4f8ce2f854d25 319 PANTHER PTHR11075:SF6 1 319 1.8E-122 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PGJ_RS03860 7ae4cf75fe44dab961a4f8ce2f854d25 319 PANTHER PTHR11075 1 319 1.8E-122 T 22-04-2016 PGJ_RS01050 a060fc1987d4c4218683c08676c63855 220 Gene3D G3DSA:3.20.20.70 1 216 4.2E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS01050 a060fc1987d4c4218683c08676c63855 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PGJ_RS01050 a060fc1987d4c4218683c08676c63855 220 PANTHER PTHR10683 1 217 3.3E-78 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PGJ_RS01050 a060fc1987d4c4218683c08676c63855 220 SUPERFAMILY SSF51569 1 216 2.41E-75 T 22-04-2016 PGJ_RS01050 a060fc1987d4c4218683c08676c63855 220 Hamap MF_00494 Probable transaldolase [tal]. 1 218 44.618 T 22-04-2016 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PGJ_RS01050 a060fc1987d4c4218683c08676c63855 220 Pfam PF00923 Transaldolase 3 208 1.0E-58 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PGJ_RS01050 a060fc1987d4c4218683c08676c63855 220 ProSitePatterns PS00958 Transaldolase active site. 84 101 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PGJ_RS01050 a060fc1987d4c4218683c08676c63855 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 215 1.4E-82 T 22-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PGJ_RS06415 551c96b3570e0fff5ca4b9accdeafdaf 241 PANTHER PTHR10794:SF37 147 240 4.0E-15 T 22-04-2016 PGJ_RS06415 551c96b3570e0fff5ca4b9accdeafdaf 241 Pfam PF02517 CAAX protease self-immunity 145 231 3.3E-17 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 PGJ_RS06415 551c96b3570e0fff5ca4b9accdeafdaf 241 PANTHER PTHR10794 147 240 4.0E-15 T 22-04-2016 PGJ_RS03030 0434c9b94a2d9d990ef86d690b6a2556 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 2.8E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PGJ_RS03030 0434c9b94a2d9d990ef86d690b6a2556 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 2.8E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PGJ_RS03030 0434c9b94a2d9d990ef86d690b6a2556 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 5.2E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PGJ_RS03030 0434c9b94a2d9d990ef86d690b6a2556 211 Gene3D G3DSA:1.10.357.10 4 194 1.7E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PGJ_RS03030 0434c9b94a2d9d990ef86d690b6a2556 211 SUPERFAMILY SSF46689 4 78 2.52E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS03030 0434c9b94a2d9d990ef86d690b6a2556 211 PANTHER PTHR30328 1 169 4.5E-21 T 22-04-2016 PGJ_RS03030 0434c9b94a2d9d990ef86d690b6a2556 211 PANTHER PTHR30328:SF8 1 169 4.5E-21 T 22-04-2016 PGJ_RS02855 31924d71e9d9a93d335f59ec36293704 360 Pfam PF00266 Aminotransferase class-V 5 349 1.1E-32 T 22-04-2016 IPR000192 Aminotransferase class V domain PGJ_RS02855 31924d71e9d9a93d335f59ec36293704 360 PANTHER PTHR21152 4 360 4.1E-150 T 22-04-2016 PGJ_RS02855 31924d71e9d9a93d335f59ec36293704 360 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PGJ_RS02855 31924d71e9d9a93d335f59ec36293704 360 Gene3D G3DSA:3.90.1150.10 257 360 1.7E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS02855 31924d71e9d9a93d335f59ec36293704 360 SUPERFAMILY SSF53383 2 357 7.23E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS02855 31924d71e9d9a93d335f59ec36293704 360 Gene3D G3DSA:3.40.640.10 17 255 2.8E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS02855 31924d71e9d9a93d335f59ec36293704 360 PANTHER PTHR21152:SF1 4 360 4.1E-150 T 22-04-2016 PGJ_RS02855 31924d71e9d9a93d335f59ec36293704 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 360 45.793 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 PGJ_RS02855 31924d71e9d9a93d335f59ec36293704 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 5.8E-147 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 PGJ_RS02855 31924d71e9d9a93d335f59ec36293704 360 PIRSF PIRSF000525 1 360 8.1E-135 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 PGJ_RS01280 c2c4bc28cbe19ff1abc3d2499e6cfc33 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 88 1.6E-15 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PGJ_RS01280 c2c4bc28cbe19ff1abc3d2499e6cfc33 308 SUPERFAMILY SSF56349 9 288 2.24E-56 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS01280 c2c4bc28cbe19ff1abc3d2499e6cfc33 308 Gene3D G3DSA:1.10.150.130 7 98 3.1E-22 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal PGJ_RS01280 c2c4bc28cbe19ff1abc3d2499e6cfc33 308 Pfam PF00589 Phage integrase family 111 281 3.0E-45 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS01280 c2c4bc28cbe19ff1abc3d2499e6cfc33 308 PANTHER PTHR30349 1 307 9.0E-106 T 22-04-2016 PGJ_RS01280 c2c4bc28cbe19ff1abc3d2499e6cfc33 308 Gene3D G3DSA:1.10.443.10 111 288 1.7E-52 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS01280 c2c4bc28cbe19ff1abc3d2499e6cfc33 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 296 29.384 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD PGJ_RS01280 c2c4bc28cbe19ff1abc3d2499e6cfc33 308 PANTHER PTHR30349:SF5 1 307 9.0E-106 T 22-04-2016 PGJ_RS04130 01d2d29b53ec9859ef59991fbc24c8d6 199 SUPERFAMILY SSF56752 3 189 5.89E-26 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PGJ_RS04130 01d2d29b53ec9859ef59991fbc24c8d6 199 Pfam PF01063 Amino-transferase class IV 106 184 1.0E-11 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PGJ_RS04130 01d2d29b53ec9859ef59991fbc24c8d6 199 Gene3D G3DSA:3.30.470.10 3 76 4.3E-14 T 22-04-2016 PGJ_RS04130 01d2d29b53ec9859ef59991fbc24c8d6 199 Gene3D G3DSA:3.20.10.10 87 185 2.7E-26 T 22-04-2016 PGJ_RS05940 d3e80a52eac3964ba7fa7d8e9935fd13 244 PANTHER PTHR30625 38 238 4.8E-49 T 22-04-2016 PGJ_RS05940 d3e80a52eac3964ba7fa7d8e9935fd13 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 107 228 2.7E-28 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PGJ_RS09375 0b0030c339339d5066b0f11bf77438ca 117 SMART SM00905 5 117 1.8E-39 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PGJ_RS09375 0b0030c339339d5066b0f11bf77438ca 117 Pfam PF02152 Dihydroneopterin aldolase 5 114 1.1E-29 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PGJ_RS09375 0b0030c339339d5066b0f11bf77438ca 117 Gene3D G3DSA:3.30.1130.10 3 115 8.6E-36 T 22-04-2016 PGJ_RS09375 0b0030c339339d5066b0f11bf77438ca 117 TIGRFAM TIGR00526 folB_dom: FolB domain 4 112 6.1E-22 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PGJ_RS09375 0b0030c339339d5066b0f11bf77438ca 117 SUPERFAMILY SSF55620 1 114 2.06E-29 T 22-04-2016 PGJ_RS09375 0b0030c339339d5066b0f11bf77438ca 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 1.2E-42 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PGJ_RS09375 0b0030c339339d5066b0f11bf77438ca 117 PANTHER PTHR20941 5 113 1.8E-21 T 22-04-2016 PGJ_RS08835 33404a25be9e307ca845864ed4b04d54 859 SUPERFAMILY SSF56935 675 761 5.86E-14 T 22-04-2016 PGJ_RS08835 33404a25be9e307ca845864ed4b04d54 859 SUPERFAMILY SSF56935 103 643 5.86E-14 T 22-04-2016 PGJ_RS08835 33404a25be9e307ca845864ed4b04d54 859 SUPERFAMILY SSF56935 794 853 5.86E-14 T 22-04-2016 PGJ_RS05465 14406b501e87ce1f114c838e51e69654 783 Pfam PF12704 MacB-like periplasmic core domain 15 230 1.6E-13 T 22-04-2016 IPR025857 MacB-like periplasmic core domain PGJ_RS05465 14406b501e87ce1f114c838e51e69654 783 PANTHER PTHR30572 398 783 2.4E-23 T 22-04-2016 PGJ_RS05465 14406b501e87ce1f114c838e51e69654 783 PANTHER PTHR30572 263 351 2.4E-23 T 22-04-2016 PGJ_RS05465 14406b501e87ce1f114c838e51e69654 783 Pfam PF02687 FtsX-like permease family 663 776 1.4E-8 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS05465 14406b501e87ce1f114c838e51e69654 783 Pfam PF02687 FtsX-like permease family 286 401 2.6E-10 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS05465 14406b501e87ce1f114c838e51e69654 783 PANTHER PTHR30572:SF4 398 783 2.4E-23 T 22-04-2016 PGJ_RS05465 14406b501e87ce1f114c838e51e69654 783 PANTHER PTHR30572:SF4 263 351 2.4E-23 T 22-04-2016 PGJ_RS06935 6a45f2eb3f9849a039026883bad09aab 460 Gene3D G3DSA:3.10.50.40 282 421 5.1E-17 T 22-04-2016 PGJ_RS06935 6a45f2eb3f9849a039026883bad09aab 460 Gene3D G3DSA:3.10.50.40 177 279 6.9E-21 T 22-04-2016 PGJ_RS06935 6a45f2eb3f9849a039026883bad09aab 460 Pfam PF00639 PPIC-type PPIASE domain 287 386 1.5E-12 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PGJ_RS06935 6a45f2eb3f9849a039026883bad09aab 460 Pfam PF00639 PPIC-type PPIASE domain 185 275 4.4E-17 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PGJ_RS06935 6a45f2eb3f9849a039026883bad09aab 460 SUPERFAMILY SSF54534 171 276 9.81E-20 T 22-04-2016 PGJ_RS06935 6a45f2eb3f9849a039026883bad09aab 460 PANTHER PTHR10657:SF11 5 341 3.7E-42 T 22-04-2016 PGJ_RS06935 6a45f2eb3f9849a039026883bad09aab 460 SUPERFAMILY SSF109998 29 185 3.34E-18 T 22-04-2016 IPR027304 Trigger factor/SurA domain PGJ_RS06935 6a45f2eb3f9849a039026883bad09aab 460 SUPERFAMILY SSF54534 279 384 1.57E-12 T 22-04-2016 PGJ_RS06935 6a45f2eb3f9849a039026883bad09aab 460 PANTHER PTHR10657 5 341 3.7E-42 T 22-04-2016 PGJ_RS05705 32f69bba32693029fa8a6c7cf478795d 419 TIGRFAM TIGR03779 Bac_Flav_CT_M: Bacteroides conjugative transposon TraM protein 1 416 2.2E-144 T 22-04-2016 IPR022187 Conjugative transposon, TraM PGJ_RS05705 32f69bba32693029fa8a6c7cf478795d 419 Pfam PF12508 Protein of unknown function (DUF3714) 217 409 5.4E-81 T 22-04-2016 IPR022187 Conjugative transposon, TraM PGJ_RS01450 d0132c2392825e6829ac441a94422b73 554 SUPERFAMILY SSF56935 213 554 3.85E-26 T 22-04-2016 PGJ_RS01450 d0132c2392825e6829ac441a94422b73 554 SUPERFAMILY SSF56935 48 111 3.85E-26 T 22-04-2016 PGJ_RS01450 d0132c2392825e6829ac441a94422b73 554 Gene3D G3DSA:2.40.160.60 48 554 2.3E-55 T 22-04-2016 PGJ_RS05555 cb1b9f982bdbf7d16e277842a26feb8a 117 Gene3D G3DSA:1.10.10.60 17 59 5.0E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS05555 cb1b9f982bdbf7d16e277842a26feb8a 117 PANTHER PTHR34585:SF13 1 99 2.1E-26 T 22-04-2016 PGJ_RS05555 cb1b9f982bdbf7d16e277842a26feb8a 117 Pfam PF12728 Helix-turn-helix domain 41 88 1.3E-9 T 22-04-2016 PGJ_RS05555 cb1b9f982bdbf7d16e277842a26feb8a 117 PANTHER PTHR34585 1 99 2.1E-26 T 22-04-2016 PGJ_RS05555 cb1b9f982bdbf7d16e277842a26feb8a 117 SUPERFAMILY SSF46955 38 91 2.56E-7 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS05145 6df7816dc5b3845e32257b445b0d972f 300 Pfam PF13612 Transposase DDE domain 108 263 4.1E-76 T 22-04-2016 IPR025668 Transposase DDE domain PGJ_RS03910 6df7816dc5b3845e32257b445b0d972f 300 Pfam PF13612 Transposase DDE domain 108 263 4.1E-76 T 22-04-2016 IPR025668 Transposase DDE domain PGJ_RS00110 e4281ac82b2cecec38b1cf693179a235 391 SUPERFAMILY SSF56935 46 373 2.75E-6 T 22-04-2016 PGJ_RS00110 e4281ac82b2cecec38b1cf693179a235 391 Gene3D G3DSA:2.40.160.60 310 376 9.3E-9 T 22-04-2016 PGJ_RS00110 e4281ac82b2cecec38b1cf693179a235 391 Gene3D G3DSA:2.40.160.60 45 252 3.6E-11 T 22-04-2016 PGJ_RS06560 3ffe00446a099cbe78e8a65969f18a5f 97 Pfam PF07863 Homologues of TraJ from Bacteroides conjugative transposon 10 75 1.4E-23 T 22-04-2016 IPR012424 Conjugative transposon, TraJ, C-terminal PGJ_RS02640 9d365474f90c55173956a155f0f93fd6 436 PANTHER PTHR11751:SF385 19 275 7.3E-146 T 22-04-2016 PGJ_RS02640 9d365474f90c55173956a155f0f93fd6 436 PANTHER PTHR11751:SF385 299 436 7.3E-146 T 22-04-2016 PGJ_RS02640 9d365474f90c55173956a155f0f93fd6 436 PANTHER PTHR11751 19 275 7.3E-146 T 22-04-2016 PGJ_RS02640 9d365474f90c55173956a155f0f93fd6 436 PANTHER PTHR11751 299 436 7.3E-146 T 22-04-2016 PGJ_RS02640 9d365474f90c55173956a155f0f93fd6 436 SUPERFAMILY SSF53383 19 420 5.52E-43 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PGJ_RS02640 9d365474f90c55173956a155f0f93fd6 436 Pfam PF00155 Aminotransferase class I and II 62 358 3.5E-16 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PGJ_RS02640 9d365474f90c55173956a155f0f93fd6 436 Gene3D G3DSA:3.90.1150.10 266 358 4.6E-5 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PGJ_RS02640 9d365474f90c55173956a155f0f93fd6 436 Gene3D G3DSA:3.40.640.10 65 265 1.1E-27 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PGJ_RS09680 faf3bc9af68a347f11c5110e27f8d5c2 296 Pfam PF01963 TraB family 31 292 2.0E-55 T 22-04-2016 IPR002816 Pheromone shutdown, TraB PGJ_RS01170 08da2c8ec7d9a63047313acb99c7ca45 250 SMART SM00382 26 223 2.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS01170 08da2c8ec7d9a63047313acb99c7ca45 250 SUPERFAMILY SSF52540 2 231 1.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01170 08da2c8ec7d9a63047313acb99c7ca45 250 PANTHER PTHR24220 3 249 2.9E-131 T 22-04-2016 PGJ_RS01170 08da2c8ec7d9a63047313acb99c7ca45 250 Gene3D G3DSA:3.40.50.300 1 234 7.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS01170 08da2c8ec7d9a63047313acb99c7ca45 250 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 2.7E-112 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 PGJ_RS01170 08da2c8ec7d9a63047313acb99c7ca45 250 PANTHER PTHR24220:SF85 3 249 2.9E-131 T 22-04-2016 PGJ_RS01170 08da2c8ec7d9a63047313acb99c7ca45 250 Pfam PF00005 ABC transporter 17 172 2.2E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS08825 83d947c42322ca501c80f3e0492fa8e7 667 SUPERFAMILY SSF52540 184 578 1.12E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08825 83d947c42322ca501c80f3e0492fa8e7 667 Pfam PF14293 YWFCY protein 2 61 5.3E-27 T 22-04-2016 IPR025988 YWFCY domain PGJ_RS08825 83d947c42322ca501c80f3e0492fa8e7 667 Pfam PF12696 TraM recognition site of TraD and TraG 461 572 1.4E-14 T 22-04-2016 IPR032689 TraD/TraG, TraM recognition site PGJ_RS08825 83d947c42322ca501c80f3e0492fa8e7 667 Gene3D G3DSA:3.40.50.300 203 277 1.0E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08825 83d947c42322ca501c80f3e0492fa8e7 667 Gene3D G3DSA:3.40.50.300 413 577 1.0E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS00840 9c2fec3ee2a1804bcf327f49f072a2d8 1226 SUPERFAMILY SSF53300 135 256 4.35E-24 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS00840 9c2fec3ee2a1804bcf327f49f072a2d8 1226 SUPERFAMILY SSF53300 359 421 4.35E-24 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS00840 9c2fec3ee2a1804bcf327f49f072a2d8 1226 Gene3D G3DSA:3.40.50.410 358 421 5.3E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS00840 9c2fec3ee2a1804bcf327f49f072a2d8 1226 Gene3D G3DSA:3.40.50.410 141 259 5.3E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS00840 9c2fec3ee2a1804bcf327f49f072a2d8 1226 SUPERFAMILY SSF69304 999 1190 9.55E-5 T 22-04-2016 PGJ_RS00840 9c2fec3ee2a1804bcf327f49f072a2d8 1226 PANTHER PTHR10579 103 257 3.5E-13 T 22-04-2016 PGJ_RS00840 9c2fec3ee2a1804bcf327f49f072a2d8 1226 SMART SM00327 142 418 6.9E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS00840 9c2fec3ee2a1804bcf327f49f072a2d8 1226 Pfam PF13519 von Willebrand factor type A domain 145 253 4.0E-15 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS00130 0db4b673e5f78d4b899cb639b23db7bf 158 SUPERFAMILY SSF53927 24 157 4.68E-33 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PGJ_RS00130 0db4b673e5f78d4b899cb639b23db7bf 158 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 25 156 4.4E-41 T 22-04-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 PGJ_RS00130 0db4b673e5f78d4b899cb639b23db7bf 158 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 28 120 2.3E-11 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 PGJ_RS00130 0db4b673e5f78d4b899cb639b23db7bf 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 72 117 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PGJ_RS00130 0db4b673e5f78d4b899cb639b23db7bf 158 PANTHER PTHR11644 12 158 2.1E-34 T 22-04-2016 PGJ_RS00130 0db4b673e5f78d4b899cb639b23db7bf 158 Gene3D G3DSA:3.40.140.10 23 157 5.2E-39 T 22-04-2016 PGJ_RS02985 154b7ed8f82b8ceedfd95f5084af3980 243 PANTHER PTHR34070 9 238 4.6E-45 T 22-04-2016 PGJ_RS02985 154b7ed8f82b8ceedfd95f5084af3980 243 PANTHER PTHR34070:SF1 9 238 4.6E-45 T 22-04-2016 PGJ_RS02985 154b7ed8f82b8ceedfd95f5084af3980 243 Gene3D G3DSA:1.25.40.290 140 232 8.2E-21 T 22-04-2016 PGJ_RS02985 154b7ed8f82b8ceedfd95f5084af3980 243 SUPERFAMILY SSF48371 15 231 1.23E-41 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 PGJ_RS02985 154b7ed8f82b8ceedfd95f5084af3980 243 Pfam PF08713 DNA alkylation repair enzyme 12 230 1.2E-61 T 22-04-2016 IPR014825 DNA alkylation repair enzyme PGJ_RS05540 d8cede9de319b9a00a821432a5e19f44 120 Gene3D G3DSA:1.10.10.10 22 57 8.4E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS05540 d8cede9de319b9a00a821432a5e19f44 120 PANTHER PTHR35810 1 104 1.6E-24 T 22-04-2016 PGJ_RS02585 63d0c8e507bf4b4e1fb2e6ccb63690c5 516 PANTHER PTHR30003:SF3 1 516 5.4E-180 T 22-04-2016 PGJ_RS02585 63d0c8e507bf4b4e1fb2e6ccb63690c5 516 PANTHER PTHR30003 1 516 5.4E-180 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PGJ_RS02585 63d0c8e507bf4b4e1fb2e6ccb63690c5 516 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 1 516 3.7E-112 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PGJ_RS02585 63d0c8e507bf4b4e1fb2e6ccb63690c5 516 Pfam PF02652 L-lactate permease 1 514 1.1E-116 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PGJ_RS09440 9b8256bef1a5bb9cab2b97360b652dd1 227 Pfam PF13568 Outer membrane protein beta-barrel domain 27 199 1.1E-19 T 22-04-2016 IPR025665 Outer membrane protein beta-barrel domain PGJ_RS05550 23c0b80d513b9f134783cc93a80a8048 92 PANTHER PTHR34585 1 82 1.7E-26 T 22-04-2016 PGJ_RS05550 23c0b80d513b9f134783cc93a80a8048 92 PANTHER PTHR34585:SF10 1 82 1.7E-26 T 22-04-2016 PGJ_RS05550 23c0b80d513b9f134783cc93a80a8048 92 SUPERFAMILY SSF46955 39 87 5.49E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS05550 23c0b80d513b9f134783cc93a80a8048 92 Gene3D G3DSA:1.10.10.10 41 84 1.9E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS08615 a816daa619503d10b5495dd620310b70 196 Gene3D G3DSA:2.40.160.20 50 183 9.6E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PGJ_RS08615 a816daa619503d10b5495dd620310b70 196 SUPERFAMILY SSF56925 45 183 4.19E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 Pfam PF08543 Phosphomethylpyrimidine kinase 204 435 1.8E-48 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 Gene3D G3DSA:3.20.20.70 450 641 2.5E-58 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 SUPERFAMILY SSF51391 4 179 9.16E-30 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 459 639 1.1E-49 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 Gene3D G3DSA:3.40.1190.20 195 435 3.2E-44 T 22-04-2016 IPR029056 Ribokinase-like PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 Pfam PF02581 Thiamine monophosphate synthase/TENI 5 174 3.1E-16 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 Pfam PF02581 Thiamine monophosphate synthase/TENI 457 638 1.5E-56 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 PANTHER PTHR20857 444 636 8.2E-55 T 22-04-2016 PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 SUPERFAMILY SSF53613 195 431 5.24E-40 T 22-04-2016 IPR029056 Ribokinase-like PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 454 645 21.262 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 SUPERFAMILY SSF51391 446 640 1.06E-53 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 Gene3D G3DSA:3.20.20.70 2 180 3.6E-38 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS09455 d77c77c185ede562df76abcb5d308799 647 PANTHER PTHR20857:SF15 444 636 8.2E-55 T 22-04-2016 PGJ_RS02580 b618d932716ad4b00556e132029f9796 156 Pfam PF05036 Sporulation related domain 80 141 6.6E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 PGJ_RS02580 b618d932716ad4b00556e132029f9796 156 SUPERFAMILY SSF110997 80 151 3.14E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 PGJ_RS02580 b618d932716ad4b00556e132029f9796 156 Gene3D G3DSA:3.30.70.1070 80 147 2.8E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 PGJ_RS00215 1b147ea765fa0a380cd235377c8bf608 322 PANTHER PTHR35604 164 320 2.7E-20 T 22-04-2016 PGJ_RS00215 1b147ea765fa0a380cd235377c8bf608 322 PANTHER PTHR35604 22 138 2.7E-20 T 22-04-2016 PGJ_RS00215 1b147ea765fa0a380cd235377c8bf608 322 Pfam PF05598 Transposase domain (DUF772) 22 94 5.4E-17 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS00215 1b147ea765fa0a380cd235377c8bf608 322 Pfam PF01609 Transposase DDE domain 104 309 2.3E-49 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS03675 3fe2b986f6da36a3faa4ff594e00cf2d 283 PANTHER PTHR12862 1 259 6.0E-33 T 22-04-2016 PGJ_RS03675 3fe2b986f6da36a3faa4ff594e00cf2d 283 SUPERFAMILY SSF53067 110 280 2.1E-43 T 22-04-2016 PGJ_RS03675 3fe2b986f6da36a3faa4ff594e00cf2d 283 SUPERFAMILY SSF53067 1 107 1.25E-30 T 22-04-2016 PGJ_RS03675 3fe2b986f6da36a3faa4ff594e00cf2d 283 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 151 4.4E-10 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type PGJ_RS00395 d4a14ce5a0fe1e807d1e9cd6c4389f21 405 Gene3D G3DSA:3.40.1710.10 69 172 1.6E-6 T 22-04-2016 PGJ_RS00395 d4a14ce5a0fe1e807d1e9cd6c4389f21 405 PANTHER PTHR30294 1 393 6.6E-134 T 22-04-2016 PGJ_RS00395 d4a14ce5a0fe1e807d1e9cd6c4389f21 405 PANTHER PTHR30294:SF2 1 393 6.6E-134 T 22-04-2016 PGJ_RS00395 d4a14ce5a0fe1e807d1e9cd6c4389f21 405 Pfam PF12698 ABC-2 family transporter protein 21 373 2.3E-48 T 22-04-2016 PGJ_RS07265 c460ab41a1c58dcb46c565a11094e2d1 504 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 76 240 6.5E-23 T 22-04-2016 PGJ_RS07265 c460ab41a1c58dcb46c565a11094e2d1 504 PANTHER PTHR33908 1 446 1.6E-31 T 22-04-2016 PGJ_RS03050 6148e8bc1d68e632925aebac0bc7f00b 236 Pfam PF01814 Hemerythrin HHE cation binding domain 86 227 2.6E-15 T 22-04-2016 IPR012312 Haemerythrin-like PGJ_RS03050 6148e8bc1d68e632925aebac0bc7f00b 236 Gene3D G3DSA:1.20.120.520 123 229 1.1E-7 T 22-04-2016 PGJ_RS05200 fecfed792f08dd16319cf5c1dca3431f 132 Gene3D G3DSA:3.10.180.10 9 129 1.6E-24 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PGJ_RS05200 fecfed792f08dd16319cf5c1dca3431f 132 SUPERFAMILY SSF54593 7 126 2.95E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PGJ_RS05200 fecfed792f08dd16319cf5c1dca3431f 132 PANTHER PTHR10374 1 132 1.7E-23 T 22-04-2016 PGJ_RS05200 fecfed792f08dd16319cf5c1dca3431f 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 126 7.1E-8 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PGJ_RS05200 fecfed792f08dd16319cf5c1dca3431f 132 PANTHER PTHR10374:SF8 1 132 1.7E-23 T 22-04-2016 PGJ_RS00545 376fbc82678176c98602b04443c41594 232 PANTHER PTHR34136 1 232 3.2E-65 T 22-04-2016 PGJ_RS00545 376fbc82678176c98602b04443c41594 232 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 54 217 1.4E-52 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 PGJ_RS00545 376fbc82678176c98602b04443c41594 232 PANTHER PTHR34136:SF1 1 232 3.2E-65 T 22-04-2016 PGJ_RS00545 376fbc82678176c98602b04443c41594 232 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 51 223 9.6E-55 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 PGJ_RS08870 48b8360149d3eb46cbaf90c3688212d4 269 Gene3D G3DSA:3.40.50.300 14 223 2.2E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08870 48b8360149d3eb46cbaf90c3688212d4 269 SUPERFAMILY SSF52540 5 201 4.36E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08870 48b8360149d3eb46cbaf90c3688212d4 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 18 219 1.8E-13 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PGJ_RS08870 48b8360149d3eb46cbaf90c3688212d4 269 PANTHER PTHR13696 14 267 1.8E-15 T 22-04-2016 PGJ_RS09390 889f2f5ec1f619d2bb43aeb798193fa7 775 Gene3D G3DSA:2.40.160.50 377 753 8.3E-10 T 22-04-2016 PGJ_RS09390 889f2f5ec1f619d2bb43aeb798193fa7 775 PANTHER PTHR12815 84 240 1.4E-137 T 22-04-2016 PGJ_RS09390 889f2f5ec1f619d2bb43aeb798193fa7 775 PANTHER PTHR12815 272 561 1.4E-137 T 22-04-2016 PGJ_RS09390 889f2f5ec1f619d2bb43aeb798193fa7 775 PANTHER PTHR12815 580 775 1.4E-137 T 22-04-2016 PGJ_RS09390 889f2f5ec1f619d2bb43aeb798193fa7 775 Pfam PF01103 Surface antigen 385 751 5.9E-23 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 PGJ_RS09390 889f2f5ec1f619d2bb43aeb798193fa7 775 PANTHER PTHR12815:SF13 84 240 1.4E-137 T 22-04-2016 PGJ_RS09390 889f2f5ec1f619d2bb43aeb798193fa7 775 PANTHER PTHR12815:SF13 272 561 1.4E-137 T 22-04-2016 PGJ_RS09390 889f2f5ec1f619d2bb43aeb798193fa7 775 PANTHER PTHR12815:SF13 580 775 1.4E-137 T 22-04-2016 PGJ_RS00010 5e14e741c55ec2b6edc94835ec6065a8 190 SUPERFAMILY SSF51161 1 169 2.98E-47 T 22-04-2016 IPR011004 Trimeric LpxA-like PGJ_RS00010 5e14e741c55ec2b6edc94835ec6065a8 190 PANTHER PTHR23416 2 163 1.8E-43 T 22-04-2016 PGJ_RS00010 5e14e741c55ec2b6edc94835ec6065a8 190 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 99 132 8.9E-7 T 22-04-2016 IPR001451 Hexapeptide repeat PGJ_RS00010 5e14e741c55ec2b6edc94835ec6065a8 190 PANTHER PTHR23416:SF53 2 163 1.8E-43 T 22-04-2016 PGJ_RS00010 5e14e741c55ec2b6edc94835ec6065a8 190 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 107 135 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 PGJ_RS00010 5e14e741c55ec2b6edc94835ec6065a8 190 Gene3D G3DSA:2.160.10.10 2 155 1.5E-44 T 22-04-2016 PGJ_RS00010 5e14e741c55ec2b6edc94835ec6065a8 190 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 32 63 1.6E-8 T 22-04-2016 IPR001451 Hexapeptide repeat PGJ_RS09870 ebdd3eada491e43a84e6b933e9f72dc1 265 Gene3D G3DSA:3.30.2010.10 88 149 7.8E-16 T 22-04-2016 PGJ_RS09870 ebdd3eada491e43a84e6b933e9f72dc1 265 PANTHER PTHR22726 3 265 2.4E-73 T 22-04-2016 PGJ_RS09870 ebdd3eada491e43a84e6b933e9f72dc1 265 Pfam PF01435 Peptidase family M48 90 253 2.2E-39 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PGJ_RS09870 ebdd3eada491e43a84e6b933e9f72dc1 265 PANTHER PTHR22726:SF1 3 265 2.4E-73 T 22-04-2016 PGJ_RS06575 e37e71c281784777a68ec4c4c05607e3 469 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 402 469 3.6E-6 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS01240 9a5c03deba59e27083e2bebfc7ddb88f 272 PANTHER PTHR21057:SF2 10 272 5.7E-143 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PGJ_RS01240 9a5c03deba59e27083e2bebfc7ddb88f 272 Pfam PF00793 DAHP synthetase I family 15 261 1.0E-60 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PGJ_RS01240 9a5c03deba59e27083e2bebfc7ddb88f 272 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 16 271 4.5E-122 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PGJ_RS01240 9a5c03deba59e27083e2bebfc7ddb88f 272 Gene3D G3DSA:3.20.20.70 15 271 4.2E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS01240 9a5c03deba59e27083e2bebfc7ddb88f 272 PANTHER PTHR21057 10 272 5.7E-143 T 22-04-2016 PGJ_RS01240 9a5c03deba59e27083e2bebfc7ddb88f 272 SUPERFAMILY SSF51569 15 271 9.77E-98 T 22-04-2016 PGJ_RS05005 ff45f5f11743048a63a0705b5ea8c093 872 SUPERFAMILY SSF49464 31 96 9.55E-9 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS05005 ff45f5f11743048a63a0705b5ea8c093 872 PANTHER PTHR11532:SF58 3 403 3.5E-15 T 22-04-2016 PGJ_RS05005 ff45f5f11743048a63a0705b5ea8c093 872 Pfam PF13715 CarboxypepD_reg-like domain 32 118 2.4E-15 T 22-04-2016 PGJ_RS05005 ff45f5f11743048a63a0705b5ea8c093 872 PANTHER PTHR11532 3 403 3.5E-15 T 22-04-2016 PGJ_RS05005 ff45f5f11743048a63a0705b5ea8c093 872 Gene3D G3DSA:2.60.40.1120 33 123 1.1E-7 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS01540 e3d34b92ea8d280536e7df86f06f2d73 508 SUPERFAMILY SSF69304 382 469 3.4E-5 T 22-04-2016 PGJ_RS01540 e3d34b92ea8d280536e7df86f06f2d73 508 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 438 505 3.5E-7 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS06495 d5a81d56f4d32b4a43e43244495b99b6 360 PANTHER PTHR33529 1 360 2.4E-84 T 22-04-2016 PGJ_RS06495 d5a81d56f4d32b4a43e43244495b99b6 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 356 4.5E-62 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 PGJ_RS06495 d5a81d56f4d32b4a43e43244495b99b6 360 PANTHER PTHR33529:SF1 1 360 2.4E-84 T 22-04-2016 PGJ_RS03380 9ffd5dd470376fb16ac42999484eab40 807 SUPERFAMILY SSF52540 311 455 4.32E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03380 9ffd5dd470376fb16ac42999484eab40 807 Pfam PF13289 SIR2-like domain 104 201 1.1E-10 T 22-04-2016 PGJ_RS00020 509eac1a50a87f03aeabee67909d9901 235 Gene3D G3DSA:3.40.50.1220 71 106 2.0E-38 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS00020 509eac1a50a87f03aeabee67909d9901 235 Gene3D G3DSA:3.40.50.1220 2 21 2.0E-38 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS00020 509eac1a50a87f03aeabee67909d9901 235 Gene3D G3DSA:3.40.50.1220 157 230 2.0E-38 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS00020 509eac1a50a87f03aeabee67909d9901 235 PANTHER PTHR11085 4 229 9.3E-59 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 PGJ_RS00020 509eac1a50a87f03aeabee67909d9901 235 SUPERFAMILY SSF52467 2 232 1.0E-68 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PGJ_RS00020 509eac1a50a87f03aeabee67909d9901 235 Gene3D G3DSA:3.30.1600.10 22 59 2.4E-18 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain PGJ_RS00020 509eac1a50a87f03aeabee67909d9901 235 Gene3D G3DSA:3.30.1600.10 107 152 2.4E-18 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain PGJ_RS00020 509eac1a50a87f03aeabee67909d9901 235 Pfam PF02146 Sir2 family 11 181 6.7E-43 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 PGJ_RS00020 509eac1a50a87f03aeabee67909d9901 235 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 4 231 52.06 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 PGJ_RS01480 d18fb8b40261b0e212764854a0869f83 358 SUPERFAMILY SSF52096 31 344 4.64E-55 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS01480 d18fb8b40261b0e212764854a0869f83 358 PANTHER PTHR11261 22 340 8.2E-40 T 22-04-2016 PGJ_RS01480 d18fb8b40261b0e212764854a0869f83 358 SMART SM00245 115 322 1.3E-5 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PGJ_RS01480 d18fb8b40261b0e212764854a0869f83 358 Pfam PF03572 Peptidase family S41 152 320 5.6E-31 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PGJ_RS01480 d18fb8b40261b0e212764854a0869f83 358 PANTHER PTHR11261:SF2 22 340 8.2E-40 T 22-04-2016 PGJ_RS01480 d18fb8b40261b0e212764854a0869f83 358 Gene3D G3DSA:3.90.226.10 149 351 3.9E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain PGJ_RS07745 6d50c7655877be20056d8a567678825b 211 Pfam PF01609 Transposase DDE domain 153 198 5.6E-11 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS07745 6d50c7655877be20056d8a567678825b 211 PANTHER PTHR35604 12 163 3.9E-21 T 22-04-2016 PGJ_RS07745 6d50c7655877be20056d8a567678825b 211 Pfam PF05598 Transposase domain (DUF772) 59 133 4.2E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS02060 875ad1da5fc35c605b871dee78672f6c 651 PANTHER PTHR10342:SF236 255 627 1.7E-48 T 22-04-2016 PGJ_RS02060 875ad1da5fc35c605b871dee78672f6c 651 Pfam PF00884 Sulfatase 281 556 3.0E-25 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PGJ_RS02060 875ad1da5fc35c605b871dee78672f6c 651 Gene3D G3DSA:3.40.720.10 282 561 7.9E-30 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PGJ_RS02060 875ad1da5fc35c605b871dee78672f6c 651 PIRSF PIRSF005091 15 650 2.3E-89 T 22-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 PGJ_RS02060 875ad1da5fc35c605b871dee78672f6c 651 SUPERFAMILY SSF53649 280 638 5.23E-46 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PGJ_RS02060 875ad1da5fc35c605b871dee78672f6c 651 PANTHER PTHR10342 255 627 1.7E-48 T 22-04-2016 PGJ_RS04800 27b5ad4f7ddc67ff65148de5e151aeba 361 SUPERFAMILY SSF116734 2 194 6.21E-39 T 22-04-2016 PGJ_RS04800 27b5ad4f7ddc67ff65148de5e151aeba 361 Pfam PF01420 Type I restriction modification DNA specificity domain 8 163 1.1E-20 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PGJ_RS04800 27b5ad4f7ddc67ff65148de5e151aeba 361 Pfam PF01420 Type I restriction modification DNA specificity domain 191 347 1.9E-24 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PGJ_RS04800 27b5ad4f7ddc67ff65148de5e151aeba 361 SUPERFAMILY SSF116734 187 361 4.91E-40 T 22-04-2016 PGJ_RS04800 27b5ad4f7ddc67ff65148de5e151aeba 361 PANTHER PTHR30408:SF2 183 360 5.8E-15 T 22-04-2016 PGJ_RS04800 27b5ad4f7ddc67ff65148de5e151aeba 361 PANTHER PTHR30408 183 360 5.8E-15 T 22-04-2016 PGJ_RS03130 73c473bec202dae674784353816d8e1c 270 Pfam PF13525 Outer membrane lipoprotein 34 180 2.3E-15 T 22-04-2016 PGJ_RS03130 73c473bec202dae674784353816d8e1c 270 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 4 217 2.0E-28 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD PGJ_RS07340 670df53aa69e611a9327f662b43bf969 362 PANTHER PTHR37833:SF1 10 355 3.8E-22 T 22-04-2016 PGJ_RS07340 670df53aa69e611a9327f662b43bf969 362 PANTHER PTHR37833 10 355 3.8E-22 T 22-04-2016 PGJ_RS07340 670df53aa69e611a9327f662b43bf969 362 Gene3D G3DSA:2.60.40.360 25 127 9.2E-27 T 22-04-2016 IPR008962 PapD-like PGJ_RS07340 670df53aa69e611a9327f662b43bf969 362 Gene3D G3DSA:2.60.40.360 256 361 1.3E-25 T 22-04-2016 IPR008962 PapD-like PGJ_RS07340 670df53aa69e611a9327f662b43bf969 362 Gene3D G3DSA:2.60.40.360 143 253 2.4E-55 T 22-04-2016 IPR008962 PapD-like PGJ_RS07340 670df53aa69e611a9327f662b43bf969 362 Pfam PF07610 Protein of unknown function (DUF1573) 52 94 9.1E-19 T 22-04-2016 IPR011467 Protein of unknown function DUF1573 PGJ_RS09925 d83a412740a6a626411c872f1f767a91 84 Pfam PF04226 Transglycosylase associated protein 34 81 3.2E-11 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 PGJ_RS09925 d83a412740a6a626411c872f1f767a91 84 PANTHER PTHR33884 1 84 3.5E-12 T 22-04-2016 PGJ_RS06805 d62a373638c991eb140654a7ee37fb62 371 Gene3D G3DSA:3.90.79.10 190 353 4.5E-4 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PGJ_RS03810 2c1b53e5edd59eba1e4b725bc2726eee 204 Pfam PF02397 Bacterial sugar transferase 16 199 3.9E-48 T 22-04-2016 IPR003362 Bacterial sugar transferase PGJ_RS03810 2c1b53e5edd59eba1e4b725bc2726eee 204 PANTHER PTHR30576 9 202 1.8E-67 T 22-04-2016 PGJ_RS06525 5422c6c72d45681f6de4c5362ca686b4 891 Gene3D G3DSA:2.170.130.10 125 214 1.3E-6 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS06525 5422c6c72d45681f6de4c5362ca686b4 891 Gene3D G3DSA:2.60.40.1120 31 124 3.5E-11 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain PGJ_RS06525 5422c6c72d45681f6de4c5362ca686b4 891 PANTHER PTHR11532 9 130 8.0E-15 T 22-04-2016 PGJ_RS06525 5422c6c72d45681f6de4c5362ca686b4 891 PANTHER PTHR11532:SF57 9 130 8.0E-15 T 22-04-2016 PGJ_RS06525 5422c6c72d45681f6de4c5362ca686b4 891 SUPERFAMILY SSF49464 31 127 6.28E-10 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain PGJ_RS06525 5422c6c72d45681f6de4c5362ca686b4 891 Pfam PF13620 Carboxypeptidase regulatory-like domain 31 114 4.2E-11 T 22-04-2016 PGJ_RS06525 5422c6c72d45681f6de4c5362ca686b4 891 SUPERFAMILY SSF56935 771 855 1.53E-14 T 22-04-2016 PGJ_RS06525 5422c6c72d45681f6de4c5362ca686b4 891 SUPERFAMILY SSF56935 328 478 1.53E-14 T 22-04-2016 PGJ_RS06525 5422c6c72d45681f6de4c5362ca686b4 891 SUPERFAMILY SSF56935 506 546 1.53E-14 T 22-04-2016 PGJ_RS06525 5422c6c72d45681f6de4c5362ca686b4 891 SUPERFAMILY SSF56935 111 256 1.53E-14 T 22-04-2016 PGJ_RS06525 5422c6c72d45681f6de4c5362ca686b4 891 SUPERFAMILY SSF56935 590 744 1.53E-14 T 22-04-2016 PGJ_RS04990 5473a36b67ed11acffa481e902c21289 194 SUPERFAMILY SSF52540 2 187 5.42E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04990 5473a36b67ed11acffa481e902c21289 194 PRINTS PR00094 Adenylate kinase signature 151 165 1.8E-32 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PGJ_RS04990 5473a36b67ed11acffa481e902c21289 194 PRINTS PR00094 Adenylate kinase signature 134 149 1.8E-32 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PGJ_RS04990 5473a36b67ed11acffa481e902c21289 194 PRINTS PR00094 Adenylate kinase signature 33 47 1.8E-32 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PGJ_RS04990 5473a36b67ed11acffa481e902c21289 194 PRINTS PR00094 Adenylate kinase signature 82 98 1.8E-32 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PGJ_RS04990 5473a36b67ed11acffa481e902c21289 194 PRINTS PR00094 Adenylate kinase signature 5 18 1.8E-32 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PGJ_RS04990 5473a36b67ed11acffa481e902c21289 194 Gene3D G3DSA:3.40.50.300 2 182 4.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS04990 5473a36b67ed11acffa481e902c21289 194 PANTHER PTHR23359 2 188 8.6E-77 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PGJ_RS04990 5473a36b67ed11acffa481e902c21289 194 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PGJ_RS04990 5473a36b67ed11acffa481e902c21289 194 Pfam PF00406 Adenylate kinase 6 164 2.3E-52 T 22-04-2016 PGJ_RS04990 5473a36b67ed11acffa481e902c21289 194 Hamap MF_00235 Adenylate kinase [adk]. 2 187 40.864 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PGJ_RS04115 fc5c34003ac9fb434b7efbdbecd1e8fa 446 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 388 444 5.2E-6 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS03900 e774f01d3dcc43b14c55e868401dbb16 351 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 310 4.9E-26 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PGJ_RS03900 e774f01d3dcc43b14c55e868401dbb16 351 Gene3D G3DSA:3.40.50.2000 3 152 1.1E-21 T 22-04-2016 PGJ_RS03900 e774f01d3dcc43b14c55e868401dbb16 351 PANTHER PTHR30160:SF7 1 350 2.7E-51 T 22-04-2016 PGJ_RS03900 e774f01d3dcc43b14c55e868401dbb16 351 Gene3D G3DSA:3.40.50.2000 174 341 2.7E-36 T 22-04-2016 PGJ_RS03900 e774f01d3dcc43b14c55e868401dbb16 351 SUPERFAMILY SSF53756 3 342 8.79E-68 T 22-04-2016 PGJ_RS03900 e774f01d3dcc43b14c55e868401dbb16 351 PANTHER PTHR30160 1 350 2.7E-51 T 22-04-2016 PGJ_RS04145 a50998fe3356690f2c73253a50f307de 393 Pfam PF16215 Protein of unknown function (DUF4876) 84 379 2.8E-62 T 22-04-2016 IPR032627 Protein of unknown function DUF4876 PGJ_RS05285 8b06fb1886229eaa7b3711e8558e4893 684 Pfam PF07676 WD40-like Beta Propeller Repeat 219 259 1.9E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller PGJ_RS05285 8b06fb1886229eaa7b3711e8558e4893 684 Pfam PF07676 WD40-like Beta Propeller Repeat 83 118 9.4E-11 T 22-04-2016 IPR011659 WD40-like Beta Propeller PGJ_RS05285 8b06fb1886229eaa7b3711e8558e4893 684 Pfam PF07676 WD40-like Beta Propeller Repeat 276 296 1.9E-4 T 22-04-2016 IPR011659 WD40-like Beta Propeller PGJ_RS05285 8b06fb1886229eaa7b3711e8558e4893 684 Pfam PF00326 Prolyl oligopeptidase family 471 683 4.1E-53 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PGJ_RS05285 8b06fb1886229eaa7b3711e8558e4893 684 SUPERFAMILY SSF82171 212 419 2.09E-49 T 22-04-2016 PGJ_RS05285 8b06fb1886229eaa7b3711e8558e4893 684 SUPERFAMILY SSF82171 39 168 2.09E-49 T 22-04-2016 PGJ_RS05285 8b06fb1886229eaa7b3711e8558e4893 684 PANTHER PTHR11731:SF150 100 684 2.0E-115 T 22-04-2016 PGJ_RS05285 8b06fb1886229eaa7b3711e8558e4893 684 PANTHER PTHR11731 100 684 2.0E-115 T 22-04-2016 PGJ_RS05285 8b06fb1886229eaa7b3711e8558e4893 684 SUPERFAMILY SSF53474 424 683 2.58E-69 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS05285 8b06fb1886229eaa7b3711e8558e4893 684 Gene3D G3DSA:2.130.10.10 38 179 1.7E-59 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PGJ_RS05285 8b06fb1886229eaa7b3711e8558e4893 684 Gene3D G3DSA:2.130.10.10 220 403 1.7E-59 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PGJ_RS05285 8b06fb1886229eaa7b3711e8558e4893 684 Gene3D G3DSA:3.40.50.1820 425 683 1.9E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS06465 950e54a054a242ed8c09826dc1c730f1 200 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 186 7.6E-32 T 22-04-2016 PGJ_RS06465 950e54a054a242ed8c09826dc1c730f1 200 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 6 198 8.1E-67 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial PGJ_RS06465 950e54a054a242ed8c09826dc1c730f1 200 PANTHER PTHR10000 86 193 5.4E-13 T 22-04-2016 PGJ_RS06465 950e54a054a242ed8c09826dc1c730f1 200 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 7 188 6.5E-24 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PGJ_RS06465 950e54a054a242ed8c09826dc1c730f1 200 Gene3D G3DSA:3.40.50.1000 4 22 1.5E-4 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS06465 950e54a054a242ed8c09826dc1c730f1 200 Gene3D G3DSA:3.40.50.1000 68 100 1.5E-4 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS06465 950e54a054a242ed8c09826dc1c730f1 200 Gene3D G3DSA:3.40.50.1000 101 193 7.8E-26 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS06465 950e54a054a242ed8c09826dc1c730f1 200 PANTHER PTHR10000:SF10 86 193 5.4E-13 T 22-04-2016 PGJ_RS06465 950e54a054a242ed8c09826dc1c730f1 200 SUPERFAMILY SSF56784 6 192 6.94E-23 T 22-04-2016 IPR023214 HAD-like domain PGJ_RS07925 f3cdbdda2de0f7a90d9301212fd4a136 139 Pfam PF06803 Protein of unknown function (DUF1232) 76 111 2.7E-15 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 PGJ_RS00575 133efe0d9b4464a9921bc498785e2a50 182 Pfam PF16271 Domain of unknown function (DUF4924) 1 176 4.4E-68 T 22-04-2016 IPR032574 Protein of unknown function DUF4924 PGJ_RS04920 3ab4cbcbe0cdd07ce5beaea7fe4315c5 301 Gene3D G3DSA:3.30.360.10 149 254 2.8E-45 T 22-04-2016 PGJ_RS04920 3ab4cbcbe0cdd07ce5beaea7fe4315c5 301 Gene3D G3DSA:3.40.50.720 8 148 1.7E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS04920 3ab4cbcbe0cdd07ce5beaea7fe4315c5 301 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 87 1.5E-7 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 PGJ_RS04920 3ab4cbcbe0cdd07ce5beaea7fe4315c5 301 SUPERFAMILY SSF51735 5 138 4.51E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS04920 3ab4cbcbe0cdd07ce5beaea7fe4315c5 301 TIGRFAM TIGR01921 DAP-DH: diaminopimelate dehydrogenase 5 300 3.9E-109 T 22-04-2016 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942|UniPathway: UPA00034 PGJ_RS04920 3ab4cbcbe0cdd07ce5beaea7fe4315c5 301 Pfam PF16654 Diaminopimelic acid dehydrogenase C-terminal domain 122 176 6.9E-14 T 22-04-2016 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942|UniPathway: UPA00034 PGJ_RS04920 3ab4cbcbe0cdd07ce5beaea7fe4315c5 301 SUPERFAMILY SSF55347 123 254 1.63E-51 T 22-04-2016 PGJ_RS04920 3ab4cbcbe0cdd07ce5beaea7fe4315c5 301 PIRSF PIRSF025648 4 301 3.4E-136 T 22-04-2016 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942|UniPathway: UPA00034 PGJ_RS04920 3ab4cbcbe0cdd07ce5beaea7fe4315c5 301 PANTHER PTHR31873 3 301 1.7E-54 T 22-04-2016 PGJ_RS08515 533c765c3f5aa3ed29a3bb2c5b41a553 62 PANTHER PTHR15238:SF3 1 62 5.5E-26 T 22-04-2016 PGJ_RS08515 533c765c3f5aa3ed29a3bb2c5b41a553 62 Pfam PF00471 Ribosomal protein L33 10 62 2.8E-21 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08515 533c765c3f5aa3ed29a3bb2c5b41a553 62 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 62 2.7E-19 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS08515 533c765c3f5aa3ed29a3bb2c5b41a553 62 PANTHER PTHR15238 1 62 5.5E-26 T 22-04-2016 PGJ_RS08515 533c765c3f5aa3ed29a3bb2c5b41a553 62 SUPERFAMILY SSF57829 4 62 9.77E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 PGJ_RS08515 533c765c3f5aa3ed29a3bb2c5b41a553 62 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 8 62 15.462 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS09710 c4f9697aadde3bd290b9324d8212c761 383 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 370 2.5E-65 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 PGJ_RS09710 c4f9697aadde3bd290b9324d8212c761 383 SUPERFAMILY SSF53756 1 337 8.16E-28 T 22-04-2016 PGJ_RS09710 c4f9697aadde3bd290b9324d8212c761 383 Pfam PF02684 Lipid-A-disaccharide synthetase 4 356 1.4E-74 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 PGJ_RS09710 c4f9697aadde3bd290b9324d8212c761 383 PANTHER PTHR30372:SF0 1 370 2.1E-85 T 22-04-2016 PGJ_RS09710 c4f9697aadde3bd290b9324d8212c761 383 PANTHER PTHR30372 1 370 2.1E-85 T 22-04-2016 PGJ_RS09255 8c0e91d3560b3f030a41d56c386fa53e 152 PANTHER PTHR10739 3 130 8.9E-23 T 22-04-2016 PGJ_RS09255 8c0e91d3560b3f030a41d56c386fa53e 152 SUPERFAMILY SSF52374 5 130 1.6E-29 T 22-04-2016 PGJ_RS09255 8c0e91d3560b3f030a41d56c386fa53e 152 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 7 68 2.7E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PGJ_RS09255 8c0e91d3560b3f030a41d56c386fa53e 152 Gene3D G3DSA:3.40.50.620 6 131 9.1E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS09255 8c0e91d3560b3f030a41d56c386fa53e 152 Pfam PF01467 Cytidylyltransferase-like 9 98 6.8E-17 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PGJ_RS03520 42bddc05803114e48cb716b82ba0c421 273 Gene3D G3DSA:3.20.20.70 1 272 4.6E-104 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PGJ_RS03520 42bddc05803114e48cb716b82ba0c421 273 PANTHER PTHR37418:SF2 1 273 2.3E-132 T 22-04-2016 PGJ_RS03520 42bddc05803114e48cb716b82ba0c421 273 PANTHER PTHR37418 1 273 2.3E-132 T 22-04-2016 PGJ_RS03520 42bddc05803114e48cb716b82ba0c421 273 Pfam PF05853 beta-keto acid cleavage enzyme 3 271 3.8E-102 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 PGJ_RS03450 1d8d31ebeb5fd97d6ab43094c3c92fbe 425 SUPERFAMILY SSF56935 374 425 1.36E-9 T 22-04-2016 PGJ_RS03450 1d8d31ebeb5fd97d6ab43094c3c92fbe 425 SUPERFAMILY SSF56935 40 333 1.36E-9 T 22-04-2016 PGJ_RS02040 59208680ee22061e80984544a7dbe71a 127 Gene3D G3DSA:3.40.250.10 37 116 5.9E-23 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS02040 59208680ee22061e80984544a7dbe71a 127 Pfam PF00581 Rhodanese-like domain 39 115 3.5E-13 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS02040 59208680ee22061e80984544a7dbe71a 127 SMART SM00450 32 126 3.0E-17 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS02040 59208680ee22061e80984544a7dbe71a 127 SUPERFAMILY SSF52821 38 120 5.24E-24 T 22-04-2016 IPR001763 Rhodanese-like domain PGJ_RS02110 a1a6eecbf553ddcfbb1fa97e54e14b43 646 Pfam PF00593 TonB dependent receptor 400 639 1.2E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS02110 a1a6eecbf553ddcfbb1fa97e54e14b43 646 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 160 1.4E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS02110 a1a6eecbf553ddcfbb1fa97e54e14b43 646 PANTHER PTHR30069:SF2 41 519 1.8E-49 T 22-04-2016 PGJ_RS02110 a1a6eecbf553ddcfbb1fa97e54e14b43 646 Gene3D G3DSA:2.40.170.20 164 646 9.4E-71 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS02110 a1a6eecbf553ddcfbb1fa97e54e14b43 646 PANTHER PTHR30069 41 519 1.8E-49 T 22-04-2016 PGJ_RS02110 a1a6eecbf553ddcfbb1fa97e54e14b43 646 SUPERFAMILY SSF56935 43 638 8.63E-97 T 22-04-2016 PGJ_RS02110 a1a6eecbf553ddcfbb1fa97e54e14b43 646 Gene3D G3DSA:2.170.130.10 40 163 7.6E-35 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PGJ_RS01845 7c57cd77a9dcf5b6a41ca6e78a8cd8b0 257 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 14 245 6.5E-40 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 PGJ_RS01845 7c57cd77a9dcf5b6a41ca6e78a8cd8b0 257 PANTHER PTHR12835 11 243 1.2E-45 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 PGJ_RS01845 7c57cd77a9dcf5b6a41ca6e78a8cd8b0 257 SUPERFAMILY SSF55681 6 206 1.09E-47 T 22-04-2016 PGJ_RS01845 7c57cd77a9dcf5b6a41ca6e78a8cd8b0 257 Pfam PF03099 Biotin/lipoate A/B protein ligase family 21 146 7.4E-15 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 PGJ_RS01845 7c57cd77a9dcf5b6a41ca6e78a8cd8b0 257 Gene3D G3DSA:3.30.930.10 7 204 2.3E-50 T 22-04-2016 PGJ_RS05015 b73b8acbe4a9f01b8b034474a517c5bb 230 Gene3D G3DSA:3.30.1150.10 134 230 1.6E-10 T 22-04-2016 PGJ_RS05015 b73b8acbe4a9f01b8b034474a517c5bb 230 PANTHER PTHR33446 61 230 9.0E-39 T 22-04-2016 PGJ_RS05015 b73b8acbe4a9f01b8b034474a517c5bb 230 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 155 229 1.4E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 PGJ_RS05015 b73b8acbe4a9f01b8b034474a517c5bb 230 PANTHER PTHR33446:SF2 61 230 9.0E-39 T 22-04-2016 PGJ_RS05015 b73b8acbe4a9f01b8b034474a517c5bb 230 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 152 229 9.6E-25 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 PGJ_RS05015 b73b8acbe4a9f01b8b034474a517c5bb 230 SUPERFAMILY SSF74653 148 227 2.88E-23 T 22-04-2016 PGJ_RS09415 de4c9bb3612a2347cf0cc843e043c74b 540 SUPERFAMILY SSF110296 29 117 5.75E-6 T 22-04-2016 PGJ_RS09415 de4c9bb3612a2347cf0cc843e043c74b 540 Gene3D G3DSA:2.130.10.140 43 102 6.3E-5 T 22-04-2016 PGJ_RS09415 de4c9bb3612a2347cf0cc843e043c74b 540 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 469 539 1.8E-13 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS05130 f7488f1a1777b1d2f02329937a615371 450 PIRSF PIRSF005850 1 448 3.1E-155 T 22-04-2016 IPR019219 Protein of unknown function DUF2130 PGJ_RS05130 f7488f1a1777b1d2f02329937a615371 450 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 175 433 6.7E-94 T 22-04-2016 IPR019219 Protein of unknown function DUF2130 PGJ_RS00515 7572584a92d4448e0371c14236d6ad3c 445 SUPERFAMILY SSF56801 186 357 1.43E-7 T 22-04-2016 PGJ_RS00515 7572584a92d4448e0371c14236d6ad3c 445 PANTHER PTHR36932:SF1 14 444 1.4E-36 T 22-04-2016 PGJ_RS00515 7572584a92d4448e0371c14236d6ad3c 445 PANTHER PTHR36932 14 444 1.4E-36 T 22-04-2016 PGJ_RS07310 a34382724ba0e482ad13e0acdd649cfb 382 Pfam PF07396 Phosphate-selective porin O and P 49 379 2.0E-82 T 22-04-2016 IPR010870 Phosphate-selective porin O/P PGJ_RS08925 ca2b6f4e74e0356ee40f0d269e6c847d 341 TIGRFAM TIGR03780 Bac_Flav_CT_N: Bacteroides conjugative transposon TraN protein 1 334 5.8E-106 T 22-04-2016 IPR022298 Conjugative transposon, TraN PGJ_RS08925 ca2b6f4e74e0356ee40f0d269e6c847d 341 Pfam PF13595 Domain of unknown function (DUF4138) 57 333 6.1E-101 T 22-04-2016 IPR022298 Conjugative transposon, TraN PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 Hamap MF_00900 GTPase HflX [hflX]. 33 404 44.744 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 SUPERFAMILY SSF52540 201 384 1.08E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 15 382 3.3E-131 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 270 288 2.2E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 2.2E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 PANTHER PTHR10229 1 383 1.2E-159 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 Gene3D G3DSA:3.40.50.300 200 385 1.1E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 PANTHER PTHR10229:SF0 1 383 1.2E-159 T 22-04-2016 PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 Pfam PF13167 GTP-binding GTPase N-terminal 31 118 2.9E-33 T 22-04-2016 IPR025121 GTPase HflX, N-terminal PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 Pfam PF16360 GTP-binding GTPase Middle Region 120 198 7.9E-32 T 22-04-2016 IPR032305 GTP-binding protein, middle domain PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 PIRSF PIRSF006809 6 396 1.1E-135 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 201 361 1.4E-12 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PGJ_RS08160 7bcd4f5f5f5d299f625e36e1b45660ad 406 Pfam PF01926 50S ribosome-binding GTPase 203 322 1.4E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 PGJ_RS03200 c97db2287c811c9c796a2a4f861f3fcc 246 PANTHER PTHR11795 1 243 1.6E-38 T 22-04-2016 PGJ_RS03200 c97db2287c811c9c796a2a4f861f3fcc 246 Pfam PF02653 Branched-chain amino acid transport system / permease component 4 229 8.2E-27 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PGJ_RS03200 c97db2287c811c9c796a2a4f861f3fcc 246 PANTHER PTHR11795:SF371 1 243 1.6E-38 T 22-04-2016 PGJ_RS04550 9ef287aaed975e18447a22c7dfbf4349 245 SUPERFAMILY SSF53448 6 220 9.64E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS04550 9ef287aaed975e18447a22c7dfbf4349 245 PANTHER PTHR10859 6 238 3.9E-68 T 22-04-2016 PGJ_RS04550 9ef287aaed975e18447a22c7dfbf4349 245 Gene3D G3DSA:3.90.550.10 6 192 4.9E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS04550 9ef287aaed975e18447a22c7dfbf4349 245 Pfam PF00535 Glycosyl transferase family 2 6 172 3.8E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PGJ_RS07585 95085bf1129e690f3378a496309e328e 315 Gene3D G3DSA:3.40.50.1980 44 212 7.7E-29 T 22-04-2016 PGJ_RS07585 95085bf1129e690f3378a496309e328e 315 Pfam PF01297 Zinc-uptake complex component A periplasmic 53 298 2.1E-40 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PGJ_RS07585 95085bf1129e690f3378a496309e328e 315 SUPERFAMILY SSF53807 51 312 1.13E-55 T 22-04-2016 PGJ_RS07585 95085bf1129e690f3378a496309e328e 315 PANTHER PTHR30477 4 312 1.4E-50 T 22-04-2016 PGJ_RS07585 95085bf1129e690f3378a496309e328e 315 PANTHER PTHR30477:SF1 4 312 1.4E-50 T 22-04-2016 PGJ_RS07585 95085bf1129e690f3378a496309e328e 315 Gene3D G3DSA:3.40.50.1980 216 313 7.5E-25 T 22-04-2016 PGJ_RS08790 fe7bbb826dd2d14c15ab849c80590508 469 Pfam PF13351 Protein of unknown function (DUF4099) 131 212 8.1E-28 T 22-04-2016 IPR025343 Protein of unknown function DUF4099 PGJ_RS08790 fe7bbb826dd2d14c15ab849c80590508 469 Pfam PF13101 Protein of unknown function (DUF3945) 244 302 1.3E-23 T 22-04-2016 IPR025222 Protein of unknown function DUF3945 PGJ_RS08790 fe7bbb826dd2d14c15ab849c80590508 469 Pfam PF13101 Protein of unknown function (DUF3945) 346 379 1.9E-5 T 22-04-2016 IPR025222 Protein of unknown function DUF3945 PGJ_RS00535 db7b94a65c46f61f53d3ce183fbb13fe 394 SUPERFAMILY SSF48208 108 390 1.6E-30 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PGJ_RS00535 db7b94a65c46f61f53d3ce183fbb13fe 394 Gene3D G3DSA:1.50.10.10 74 240 1.9E-7 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 PGJ_RS00535 db7b94a65c46f61f53d3ce183fbb13fe 394 Gene3D G3DSA:1.50.10.10 254 390 3.2E-11 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 PGJ_RS09030 16f79219148d417482d864c5f73f363e 410 PANTHER PTHR30349:SF26 41 398 3.8E-88 T 22-04-2016 PGJ_RS09030 16f79219148d417482d864c5f73f363e 410 SUPERFAMILY SSF56349 126 392 3.7E-40 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PGJ_RS09030 16f79219148d417482d864c5f73f363e 410 Pfam PF13102 Phage integrase SAM-like domain 9 174 3.5E-23 T 22-04-2016 IPR025269 Phage integrase SAM-like domain PGJ_RS09030 16f79219148d417482d864c5f73f363e 410 Pfam PF00589 Phage integrase family 263 383 3.7E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS09030 16f79219148d417482d864c5f73f363e 410 PANTHER PTHR30349 41 398 3.8E-88 T 22-04-2016 PGJ_RS09030 16f79219148d417482d864c5f73f363e 410 Gene3D G3DSA:1.10.443.10 224 387 1.5E-29 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PGJ_RS04780 8f6895b376e3922f831253cc949baeac 307 Pfam PF03432 Relaxase/Mobilisation nuclease domain 8 210 1.4E-33 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 PGJ_RS00660 6608391cee297bef0df65d373c562dd2 292 SUPERFAMILY SSF56317 1 286 4.97E-88 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PGJ_RS00660 6608391cee297bef0df65d373c562dd2 292 Gene3D G3DSA:3.60.110.10 1 287 6.4E-100 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PGJ_RS00660 6608391cee297bef0df65d373c562dd2 292 Pfam PF00795 Carbon-nitrogen hydrolase 2 269 4.3E-59 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PGJ_RS00660 6608391cee297bef0df65d373c562dd2 292 PANTHER PTHR23088 1 288 3.1E-131 T 22-04-2016 PGJ_RS00660 6608391cee297bef0df65d373c562dd2 292 PANTHER PTHR23088:SF11 1 288 3.1E-131 T 22-04-2016 PGJ_RS02285 b65c7883034d96098cba8657c1c2b87f 559 Pfam PF06826 Predicted Permease Membrane Region 383 554 3.6E-45 T 22-04-2016 IPR006512 YidE/YbjL duplication PGJ_RS02285 b65c7883034d96098cba8657c1c2b87f 559 Pfam PF06826 Predicted Permease Membrane Region 20 181 1.6E-41 T 22-04-2016 IPR006512 YidE/YbjL duplication PGJ_RS02285 b65c7883034d96098cba8657c1c2b87f 559 PANTHER PTHR30445:SF1 1 558 6.6E-209 T 22-04-2016 PGJ_RS02285 b65c7883034d96098cba8657c1c2b87f 559 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 388 541 3.6E-47 T 22-04-2016 IPR006512 YidE/YbjL duplication PGJ_RS02285 b65c7883034d96098cba8657c1c2b87f 559 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 24 169 8.4E-36 T 22-04-2016 IPR006512 YidE/YbjL duplication PGJ_RS02285 b65c7883034d96098cba8657c1c2b87f 559 Gene3D G3DSA:3.30.70.1450 302 370 1.9E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS02285 b65c7883034d96098cba8657c1c2b87f 559 PANTHER PTHR30445 1 558 6.6E-209 T 22-04-2016 PGJ_RS02285 b65c7883034d96098cba8657c1c2b87f 559 SUPERFAMILY SSF116726 298 370 7.32E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS02285 b65c7883034d96098cba8657c1c2b87f 559 Pfam PF02080 TrkA-C domain 213 280 6.7E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS02285 b65c7883034d96098cba8657c1c2b87f 559 Pfam PF02080 TrkA-C domain 304 368 5.7E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PGJ_RS07140 b2d7c2b60f96876c9e7dd6270275ddcb 186 Pfam PF16702 Domain of unknown function (DUF5063) 10 171 3.1E-50 T 22-04-2016 IPR032025 Protein of unknown function DUF5063 PGJ_RS07685 b4562d324ccf5bc6906ad26cdb266274 262 SUPERFAMILY SSF56300 2 249 3.65E-22 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS07685 b4562d324ccf5bc6906ad26cdb266274 262 PANTHER PTHR34990 6 250 1.5E-38 T 22-04-2016 PGJ_RS07685 b4562d324ccf5bc6906ad26cdb266274 262 Gene3D G3DSA:3.60.21.10 205 250 1.7E-16 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS07685 b4562d324ccf5bc6906ad26cdb266274 262 Gene3D G3DSA:3.60.21.10 4 138 1.7E-16 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like PGJ_RS07685 b4562d324ccf5bc6906ad26cdb266274 262 Pfam PF00149 Calcineurin-like phosphoesterase 4 220 1.1E-7 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PGJ_RS09265 39e89de5438dbdf4a8fbf0744d659773 308 Pfam PF01066 CDP-alcohol phosphatidyltransferase 42 110 1.4E-11 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PGJ_RS02840 24f5a54b71d81186c43607287296f9bd 374 SUPERFAMILY SSF158949 105 244 1.05E-55 T 22-04-2016 IPR018598 Domain of unknown function DUF2027 PGJ_RS02840 24f5a54b71d81186c43607287296f9bd 374 Gene3D G3DSA:2.60.40.1600 114 247 2.6E-58 T 22-04-2016 IPR018598 Domain of unknown function DUF2027 PGJ_RS02840 24f5a54b71d81186c43607287296f9bd 374 Pfam PF09640 Domain of unknown function (DUF2027) 113 266 8.9E-62 T 22-04-2016 IPR018598 Domain of unknown function DUF2027 PGJ_RS02840 24f5a54b71d81186c43607287296f9bd 374 Pfam PF01713 Smr domain 316 372 2.6E-6 T 22-04-2016 IPR002625 Smr domain PGJ_RS06080 a46e4b8c3c822684ab868efcabc303fc 90 SUPERFAMILY SSF46911 16 87 1.44E-28 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06080 a46e4b8c3c822684ab868efcabc303fc 90 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 34 85 3.0E-16 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06080 a46e4b8c3c822684ab868efcabc303fc 90 PANTHER PTHR13479 21 86 2.4E-29 T 22-04-2016 PGJ_RS06080 a46e4b8c3c822684ab868efcabc303fc 90 TIGRFAM TIGR00165 S18: ribosomal protein bS18 20 87 1.9E-33 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06080 a46e4b8c3c822684ab868efcabc303fc 90 ProSitePatterns PS00057 Ribosomal protein S18 signature. 35 58 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06080 a46e4b8c3c822684ab868efcabc303fc 90 Gene3D G3DSA:4.10.640.10 22 87 3.8E-33 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06080 a46e4b8c3c822684ab868efcabc303fc 90 PRINTS PR00974 Ribosomal protein S18 family signature 74 84 1.0E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06080 a46e4b8c3c822684ab868efcabc303fc 90 PRINTS PR00974 Ribosomal protein S18 family signature 52 59 1.0E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06080 a46e4b8c3c822684ab868efcabc303fc 90 PRINTS PR00974 Ribosomal protein S18 family signature 42 52 1.0E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06080 a46e4b8c3c822684ab868efcabc303fc 90 PRINTS PR00974 Ribosomal protein S18 family signature 60 74 1.0E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06080 a46e4b8c3c822684ab868efcabc303fc 90 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 16 87 21.665 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS06080 a46e4b8c3c822684ab868efcabc303fc 90 Pfam PF01084 Ribosomal protein S18 33 82 9.9E-26 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS01080 ce1f40b9b99f447fcffa5905d1497226 506 Gene3D G3DSA:2.160.20.10 251 424 7.2E-7 T 22-04-2016 IPR012334 Pectin lyase fold PGJ_RS01080 ce1f40b9b99f447fcffa5905d1497226 506 SUPERFAMILY SSF51126 238 501 1.43E-10 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor PGJ_RS06660 d5a2414778f6740bafc620a853802ab3 300 Pfam PF13612 Transposase DDE domain 108 263 1.3E-76 T 22-04-2016 IPR025668 Transposase DDE domain PGJ_RS02845 53f667fa77ac4067686583d46b4d09aa 415 SUPERFAMILY SSF110849 363 402 6.54E-5 T 22-04-2016 IPR003115 ParB/Sulfiredoxin PGJ_RS02845 53f667fa77ac4067686583d46b4d09aa 415 SUPERFAMILY SSF110849 207 288 6.54E-5 T 22-04-2016 IPR003115 ParB/Sulfiredoxin PGJ_RS02845 53f667fa77ac4067686583d46b4d09aa 415 PANTHER PTHR36454:SF1 1 415 1.4E-166 T 22-04-2016 PGJ_RS02845 53f667fa77ac4067686583d46b4d09aa 415 Pfam PF06245 Protein of unknown function (DUF1015) 4 413 2.5E-137 T 22-04-2016 IPR008323 Uncharacterised conserved protein UCP033563 PGJ_RS02845 53f667fa77ac4067686583d46b4d09aa 415 PANTHER PTHR36454 1 415 1.4E-166 T 22-04-2016 PGJ_RS02845 53f667fa77ac4067686583d46b4d09aa 415 PIRSF PIRSF033563 1 415 5.4E-153 T 22-04-2016 IPR008323 Uncharacterised conserved protein UCP033563 PGJ_RS06785 b2c1e96198c6d5e7a2e7758cf315c129 317 TIGRFAM TIGR01200 GLPGLI: GLPGLI family protein 31 280 2.0E-43 T 22-04-2016 IPR005901 GLPGLI family protein PGJ_RS06785 b2c1e96198c6d5e7a2e7758cf315c129 317 Pfam PF09697 Protein of unknown function (Porph_ging) 206 232 1.8E-5 T 22-04-2016 IPR005901 GLPGLI family protein PGJ_RS01695 a2622448a448099ff45f27d67709d6c4 234 Pfam PF12836 Helix-hairpin-helix motif 105 164 5.1E-17 T 22-04-2016 PGJ_RS01695 a2622448a448099ff45f27d67709d6c4 234 PANTHER PTHR21180:SF32 39 176 4.0E-15 T 22-04-2016 PGJ_RS01695 a2622448a448099ff45f27d67709d6c4 234 SUPERFAMILY SSF47781 95 166 2.45E-16 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PGJ_RS01695 a2622448a448099ff45f27d67709d6c4 234 PANTHER PTHR21180 39 176 4.0E-15 T 22-04-2016 PGJ_RS01695 a2622448a448099ff45f27d67709d6c4 234 Gene3D G3DSA:1.10.150.310 109 198 1.0E-12 T 22-04-2016 IPR023097 Tex RuvX-like domain PGJ_RS08020 d212ab5d549b5b15a446e0bc43ea2449 302 Pfam PF16119 Domain of unknown function (DUF4835) 23 298 8.3E-99 T 22-04-2016 IPR032274 Protein of unknown function DUF4835 PGJ_RS01910 b75044deaeb4ea9094ffbdc3616178c5 238 SMART SM00014 61 177 4.0E-8 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PGJ_RS01910 b75044deaeb4ea9094ffbdc3616178c5 238 Pfam PF01569 PAP2 superfamily 65 183 8.8E-23 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PGJ_RS01910 b75044deaeb4ea9094ffbdc3616178c5 238 Gene3D G3DSA:1.20.144.10 6 185 5.0E-25 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PGJ_RS01910 b75044deaeb4ea9094ffbdc3616178c5 238 SUPERFAMILY SSF48317 6 187 4.58E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PGJ_RS06250 0e6da66aa610742639ace51d0c285317 940 Gene3D G3DSA:2.40.10.10 240 376 6.1E-37 T 22-04-2016 PGJ_RS06250 0e6da66aa610742639ace51d0c285317 940 SUPERFAMILY SSF50494 217 469 1.71E-31 T 22-04-2016 IPR009003 Peptidase S1, PA clan PGJ_RS06250 0e6da66aa610742639ace51d0c285317 940 Gene3D G3DSA:2.40.10.10 408 445 3.4E-4 T 22-04-2016 PGJ_RS06250 0e6da66aa610742639ace51d0c285317 940 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 268 273 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 PGJ_RS06250 0e6da66aa610742639ace51d0c285317 940 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 884 940 1.6E-8 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS06445 5280b827cd41bc773bc3289565b8903e 188 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 183 5.8E-68 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PGJ_RS06445 5280b827cd41bc773bc3289565b8903e 188 Gene3D G3DSA:3.30.63.10 32 85 2.7E-22 T 22-04-2016 PGJ_RS06445 5280b827cd41bc773bc3289565b8903e 188 Hamap MF_00328 Guanylate kinase [gmk]. 2 186 33.862 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PGJ_RS06445 5280b827cd41bc773bc3289565b8903e 188 PANTHER PTHR23117 3 188 2.3E-70 T 22-04-2016 PGJ_RS06445 5280b827cd41bc773bc3289565b8903e 188 Gene3D G3DSA:3.40.50.300 3 24 3.3E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06445 5280b827cd41bc773bc3289565b8903e 188 Gene3D G3DSA:3.40.50.300 86 184 3.3E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06445 5280b827cd41bc773bc3289565b8903e 188 Pfam PF00625 Guanylate kinase 2 183 4.7E-47 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PGJ_RS06445 5280b827cd41bc773bc3289565b8903e 188 SMART SM00072 1 186 5.5E-46 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PGJ_RS06445 5280b827cd41bc773bc3289565b8903e 188 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PGJ_RS06445 5280b827cd41bc773bc3289565b8903e 188 SUPERFAMILY SSF52540 3 184 1.61E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS02950 109ef4f2254af123e37eecb617ac2fe8 519 SUPERFAMILY SSF50249 39 145 3.86E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02950 109ef4f2254af123e37eecb617ac2fe8 519 Pfam PF00575 S1 RNA binding domain 36 127 1.4E-4 T 22-04-2016 IPR003029 S1 domain GO:0003676 PGJ_RS02950 109ef4f2254af123e37eecb617ac2fe8 519 Pfam PF10150 Ribonuclease E/G family 142 412 2.4E-94 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PGJ_RS02950 109ef4f2254af123e37eecb617ac2fe8 519 PANTHER PTHR30001 1 519 7.3E-164 T 22-04-2016 PGJ_RS02950 109ef4f2254af123e37eecb617ac2fe8 519 Gene3D G3DSA:2.40.50.140 35 146 2.8E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold PGJ_RS02950 109ef4f2254af123e37eecb617ac2fe8 519 SMART SM00316 37 140 3.1E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 PGJ_RS02950 109ef4f2254af123e37eecb617ac2fe8 519 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 436 1.4E-127 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PGJ_RS01165 ca166676b814a0ad79118245f3af1dc9 481 Pfam PF01458 Uncharacterized protein family (UPF0051) 219 452 7.6E-68 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 PGJ_RS01165 ca166676b814a0ad79118245f3af1dc9 481 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 15 472 1.6E-198 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 PGJ_RS01165 ca166676b814a0ad79118245f3af1dc9 481 SUPERFAMILY SSF101960 36 478 9.81E-140 T 22-04-2016 PGJ_RS01165 ca166676b814a0ad79118245f3af1dc9 481 PANTHER PTHR30508 1 481 0.0 T 22-04-2016 PGJ_RS01165 ca166676b814a0ad79118245f3af1dc9 481 PANTHER PTHR30508:SF1 1 481 0.0 T 22-04-2016 PGJ_RS03370 73e627e5fc2abad1968f9a1176fe0940 68 SMART SM00530 7 62 5.0E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PGJ_RS03370 73e627e5fc2abad1968f9a1176fe0940 68 Gene3D G3DSA:1.10.260.40 5 66 9.0E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS03370 73e627e5fc2abad1968f9a1176fe0940 68 SUPERFAMILY SSF47413 4 67 1.18E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS03370 73e627e5fc2abad1968f9a1176fe0940 68 Pfam PF01381 Helix-turn-helix 8 62 1.1E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PGJ_RS09855 42dce603e3cac84a886798b9ed6a8599 322 PANTHER PTHR35604 164 320 2.3E-19 T 22-04-2016 PGJ_RS09855 42dce603e3cac84a886798b9ed6a8599 322 PANTHER PTHR35604 22 138 2.3E-19 T 22-04-2016 PGJ_RS09855 42dce603e3cac84a886798b9ed6a8599 322 Pfam PF05598 Transposase domain (DUF772) 22 94 5.4E-17 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS09855 42dce603e3cac84a886798b9ed6a8599 322 Pfam PF01609 Transposase DDE domain 104 309 7.1E-48 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS05905 d0d395eccd69093df232a993233680e3 357 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 14 340 4.5E-53 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 PGJ_RS05905 d0d395eccd69093df232a993233680e3 357 SUPERFAMILY SSF52540 40 194 2.19E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05905 d0d395eccd69093df232a993233680e3 357 PANTHER PTHR30160:SF13 5 354 5.5E-66 T 22-04-2016 PGJ_RS05905 d0d395eccd69093df232a993233680e3 357 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 354 27.573 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 PGJ_RS05905 d0d395eccd69093df232a993233680e3 357 PANTHER PTHR30160 5 354 5.5E-66 T 22-04-2016 PGJ_RS05905 d0d395eccd69093df232a993233680e3 357 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 7 349 2.2E-87 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 SUPERFAMILY SSF53187 399 483 9.29E-62 T 22-04-2016 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 SUPERFAMILY SSF53187 11 183 9.29E-62 T 22-04-2016 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 484 6.8E-216 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PANTHER PTHR11014 394 484 8.0E-153 T 22-04-2016 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PANTHER PTHR11014 1 186 8.0E-153 T 22-04-2016 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PANTHER PTHR11014 206 305 8.0E-153 T 22-04-2016 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PANTHER PTHR11014:SF54 394 484 8.0E-153 T 22-04-2016 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PANTHER PTHR11014:SF54 1 186 8.0E-153 T 22-04-2016 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PANTHER PTHR11014:SF54 206 305 8.0E-153 T 22-04-2016 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 Pfam PF01546 Peptidase family M20/M25/M40 74 482 1.5E-23 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PIRSF PIRSF016599 2 484 1.1E-201 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 Pfam PF07687 Peptidase dimerisation domain 209 292 9.6E-6 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PRINTS PR00934 X-His dipeptidase (M25) signature 452 474 4.8E-78 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PRINTS PR00934 X-His dipeptidase (M25) signature 102 120 4.8E-78 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PRINTS PR00934 X-His dipeptidase (M25) signature 253 272 4.8E-78 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PRINTS PR00934 X-His dipeptidase (M25) signature 365 383 4.8E-78 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PRINTS PR00934 X-His dipeptidase (M25) signature 136 153 4.8E-78 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PRINTS PR00934 X-His dipeptidase (M25) signature 430 446 4.8E-78 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PRINTS PR00934 X-His dipeptidase (M25) signature 208 225 4.8E-78 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PRINTS PR00934 X-His dipeptidase (M25) signature 81 100 4.8E-78 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 PRINTS PR00934 X-His dipeptidase (M25) signature 160 178 4.8E-78 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 Gene3D G3DSA:3.40.630.10 399 483 2.6E-101 T 22-04-2016 PGJ_RS00630 ff276be0934c08d0f1f06266ba9a461d 484 Gene3D G3DSA:3.40.630.10 3 182 2.6E-101 T 22-04-2016 PGJ_RS08065 889c131304844264cbafe7ba25fdbaa5 386 Pfam PF02595 Glycerate kinase family 4 379 1.7E-141 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PGJ_RS08065 889c131304844264cbafe7ba25fdbaa5 386 SUPERFAMILY SSF110738 3 380 2.09E-122 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PGJ_RS08065 889c131304844264cbafe7ba25fdbaa5 386 PIRSF PIRSF006078 2 383 1.7E-133 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PGJ_RS08065 889c131304844264cbafe7ba25fdbaa5 386 Gene3D G3DSA:3.90.1510.10 43 280 5.7E-91 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 PGJ_RS08065 889c131304844264cbafe7ba25fdbaa5 386 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 380 8.5E-161 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PGJ_RS08065 889c131304844264cbafe7ba25fdbaa5 386 PANTHER PTHR21599 1 378 2.0E-144 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PGJ_RS08065 889c131304844264cbafe7ba25fdbaa5 386 PANTHER PTHR21599:SF0 1 378 2.0E-144 T 22-04-2016 PGJ_RS03070 7e7eb3b53a64217aa64c0e4858f69966 702 SUPERFAMILY SSF55486 333 695 1.57E-22 T 22-04-2016 PGJ_RS09495 613046d30fcee1c2b58ad7137152e895 192 PANTHER PTHR12919 2 166 1.8E-47 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS09495 613046d30fcee1c2b58ad7137152e895 192 SUPERFAMILY SSF54565 3 99 7.32E-35 T 22-04-2016 IPR023803 Ribosomal protein S16 domain PGJ_RS09495 613046d30fcee1c2b58ad7137152e895 192 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 23.845 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS09495 613046d30fcee1c2b58ad7137152e895 192 Pfam PF00886 Ribosomal protein S16 9 67 5.4E-25 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS09495 613046d30fcee1c2b58ad7137152e895 192 TIGRFAM TIGR00002 S16: ribosomal protein bS16 4 79 2.7E-31 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PGJ_RS09495 613046d30fcee1c2b58ad7137152e895 192 Gene3D G3DSA:3.30.1320.10 3 83 1.9E-33 T 22-04-2016 IPR023803 Ribosomal protein S16 domain PGJ_RS01315 cda81bdd6dae5857324591ef1eb1a3bf 160 SUPERFAMILY SSF142433 5 156 1.83E-53 T 22-04-2016 IPR008136 CinA, C-terminal PGJ_RS01315 cda81bdd6dae5857324591ef1eb1a3bf 160 PANTHER PTHR13939 7 155 5.1E-56 T 22-04-2016 PGJ_RS01315 cda81bdd6dae5857324591ef1eb1a3bf 160 Gene3D G3DSA:3.90.950.20 4 158 2.1E-57 T 22-04-2016 IPR008136 CinA, C-terminal PGJ_RS01315 cda81bdd6dae5857324591ef1eb1a3bf 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 9 152 6.5E-47 T 22-04-2016 IPR008136 CinA, C-terminal PGJ_RS01315 cda81bdd6dae5857324591ef1eb1a3bf 160 Pfam PF02464 Competence-damaged protein 5 153 3.6E-56 T 22-04-2016 IPR008136 CinA, C-terminal PGJ_RS07195 8c890ebd017afa96e270b20f6697514c 327 SUPERFAMILY SSF56935 136 276 3.66E-5 T 22-04-2016 PGJ_RS08910 d19532d8330fb9c80df4f6142009964c 207 TIGRFAM TIGR03781 Bac_Flav_CT_K: Bacteroides conjugative transposon TraK protein 6 207 9.8E-109 T 22-04-2016 IPR022276 Conjugative transposon, TraK PGJ_RS07885 b754f27930644a83372b686b142d6ef6 271 Pfam PF01578 Cytochrome C assembly protein 74 258 4.5E-26 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PGJ_RS07885 b754f27930644a83372b686b142d6ef6 271 PANTHER PTHR30071 1 260 5.8E-49 T 22-04-2016 PGJ_RS02310 80f7188dfa7370558b1032c13a330eec 238 Gene3D G3DSA:1.20.1540.10 13 229 9.9E-44 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PGJ_RS02310 80f7188dfa7370558b1032c13a330eec 238 Pfam PF01694 Rhomboid family 56 230 8.4E-33 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PGJ_RS02310 80f7188dfa7370558b1032c13a330eec 238 SUPERFAMILY SSF144091 145 230 3.66E-43 T 22-04-2016 PGJ_RS02310 80f7188dfa7370558b1032c13a330eec 238 SUPERFAMILY SSF144091 12 115 3.66E-43 T 22-04-2016 PGJ_RS02310 80f7188dfa7370558b1032c13a330eec 238 PANTHER PTHR22936 1 113 2.5E-34 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 PGJ_RS02310 80f7188dfa7370558b1032c13a330eec 238 PANTHER PTHR22936 143 226 2.5E-34 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 PGJ_RS02330 c352028dd935a73bf31f3c7bd5a9f6da 58 Pfam PF01609 Transposase DDE domain 2 46 4.1E-13 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS06010 c71b3d0e5a1831e187d39ed3d693c09c 344 Gene3D G3DSA:3.40.30.10 19 117 2.7E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS06010 c71b3d0e5a1831e187d39ed3d693c09c 344 SUPERFAMILY SSF52833 25 118 1.5E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS07190 698815e2095ac6df69b1a29044e0a43e 245 Pfam PF04402 Protein of unknown function (DUF541) 37 211 3.4E-24 T 22-04-2016 IPR007497 Protein of unknown function DUF541 PGJ_RS07190 698815e2095ac6df69b1a29044e0a43e 245 PANTHER PTHR34387 6 204 7.1E-13 T 22-04-2016 PGJ_RS07190 698815e2095ac6df69b1a29044e0a43e 245 PIRSF PIRSF029033 1 221 1.4E-34 T 22-04-2016 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein PGJ_RS07190 698815e2095ac6df69b1a29044e0a43e 245 PANTHER PTHR34387:SF1 6 204 7.1E-13 T 22-04-2016 PGJ_RS02145 e4beb3040c5c4fa663066c174d442426 139 Pfam PF03061 Thioesterase superfamily 22 95 2.3E-7 T 22-04-2016 IPR006683 Thioesterase domain PGJ_RS02145 e4beb3040c5c4fa663066c174d442426 139 SUPERFAMILY SSF54637 5 116 2.86E-26 T 22-04-2016 IPR029069 HotDog domain PGJ_RS02145 e4beb3040c5c4fa663066c174d442426 139 PANTHER PTHR31793 6 115 9.8E-23 T 22-04-2016 PGJ_RS02145 e4beb3040c5c4fa663066c174d442426 139 Gene3D G3DSA:3.10.129.10 2 115 2.0E-24 T 22-04-2016 IPR029069 HotDog domain PGJ_RS08450 2b1676fd0163b2f301b3401fcbed7c89 473 SUPERFAMILY SSF53474 347 355 2.41E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS08450 2b1676fd0163b2f301b3401fcbed7c89 473 SUPERFAMILY SSF53474 126 281 2.41E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS08450 2b1676fd0163b2f301b3401fcbed7c89 473 SUPERFAMILY SSF53474 390 448 2.41E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS08450 2b1676fd0163b2f301b3401fcbed7c89 473 Pfam PF12146 Serine aminopeptidase, S33 190 286 4.7E-15 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 PGJ_RS08450 2b1676fd0163b2f301b3401fcbed7c89 473 Gene3D G3DSA:3.40.50.1820 133 468 1.4E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS08450 2b1676fd0163b2f301b3401fcbed7c89 473 PANTHER PTHR12277 149 276 1.7E-14 T 22-04-2016 PGJ_RS08540 803dd92f6d3187de5784a2860ffa984c 191 SUPERFAMILY SSF55821 5 190 1.74E-42 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PGJ_RS08540 803dd92f6d3187de5784a2860ffa984c 191 Gene3D G3DSA:3.90.870.10 4 191 4.9E-53 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PGJ_RS08540 803dd92f6d3187de5784a2860ffa984c 191 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 191 9.8E-43 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 PGJ_RS08540 803dd92f6d3187de5784a2860ffa984c 191 Pfam PF01300 Telomere recombination 15 191 3.9E-41 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 PGJ_RS08540 803dd92f6d3187de5784a2860ffa984c 191 PANTHER PTHR17490 11 191 1.1E-44 T 22-04-2016 PGJ_RS02390 4313e65e087d017c11d9fb16aec09b42 400 Gene3D G3DSA:1.25.40.10 260 385 4.9E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS02390 4313e65e087d017c11d9fb16aec09b42 400 SUPERFAMILY SSF48452 135 323 3.79E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS02390 4313e65e087d017c11d9fb16aec09b42 400 PANTHER PTHR23083 126 164 4.3E-25 T 22-04-2016 PGJ_RS02390 4313e65e087d017c11d9fb16aec09b42 400 PANTHER PTHR23083 180 332 4.3E-25 T 22-04-2016 PGJ_RS02390 4313e65e087d017c11d9fb16aec09b42 400 PANTHER PTHR23083 352 389 4.3E-25 T 22-04-2016 PGJ_RS02390 4313e65e087d017c11d9fb16aec09b42 400 Pfam PF13432 Tetratricopeptide repeat 257 320 2.0E-7 T 22-04-2016 PGJ_RS02390 4313e65e087d017c11d9fb16aec09b42 400 SMART SM00028 135 168 36.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS02390 4313e65e087d017c11d9fb16aec09b42 400 SMART SM00028 286 319 0.0025 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS02390 4313e65e087d017c11d9fb16aec09b42 400 SMART SM00028 252 285 1.4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PGJ_RS02390 4313e65e087d017c11d9fb16aec09b42 400 Gene3D G3DSA:1.25.40.10 138 259 1.9E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PGJ_RS08805 8f26cacc8a25e7f2fa1c70f6291ca9d2 284 TIGRFAM TIGR01200 GLPGLI: GLPGLI family protein 8 237 2.7E-40 T 22-04-2016 IPR005901 GLPGLI family protein PGJ_RS08805 8f26cacc8a25e7f2fa1c70f6291ca9d2 284 Pfam PF09697 Protein of unknown function (Porph_ging) 169 192 3.3E-6 T 22-04-2016 IPR005901 GLPGLI family protein PGJ_RS08875 809176e5c782e7a9d0c061b23fd6fe30 128 Pfam PF11888 Protein of unknown function (DUF3408) 18 120 2.2E-16 T 22-04-2016 IPR021823 Protein of unknown function DUF3408 PGJ_RS08120 01c274c074006abc5bcff7b119b68f56 452 Gene3D G3DSA:1.20.1530.10 9 256 1.5E-128 T 22-04-2016 IPR023171 Na/H antiporter domain PGJ_RS08120 01c274c074006abc5bcff7b119b68f56 452 Gene3D G3DSA:1.20.1530.10 304 442 1.5E-128 T 22-04-2016 IPR023171 Na/H antiporter domain PGJ_RS08120 01c274c074006abc5bcff7b119b68f56 452 PANTHER PTHR30341 293 452 1.1E-129 T 22-04-2016 PGJ_RS08120 01c274c074006abc5bcff7b119b68f56 452 PANTHER PTHR30341 6 255 1.1E-129 T 22-04-2016 PGJ_RS08120 01c274c074006abc5bcff7b119b68f56 452 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 11 451 20.536 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PGJ_RS08120 01c274c074006abc5bcff7b119b68f56 452 PANTHER PTHR30341:SF0 293 452 1.1E-129 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PGJ_RS08120 01c274c074006abc5bcff7b119b68f56 452 PANTHER PTHR30341:SF0 6 255 1.1E-129 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PGJ_RS08120 01c274c074006abc5bcff7b119b68f56 452 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 21 437 3.5E-107 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PGJ_RS08120 01c274c074006abc5bcff7b119b68f56 452 Pfam PF06965 Na+/H+ antiporter 1 14 438 1.4E-127 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PGJ_RS09745 7002404dfc13c633a064e942a9d5c3d1 359 PANTHER PTHR35604 12 172 1.6E-25 T 22-04-2016 PGJ_RS09745 7002404dfc13c633a064e942a9d5c3d1 359 PANTHER PTHR35604 201 357 1.6E-25 T 22-04-2016 PGJ_RS09745 7002404dfc13c633a064e942a9d5c3d1 359 Pfam PF01609 Transposase DDE domain 141 346 3.9E-48 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS09745 7002404dfc13c633a064e942a9d5c3d1 359 Pfam PF05598 Transposase domain (DUF772) 59 131 6.5E-17 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS05930 edcd7f9d0010747743f314c054558a9f 275 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 198 275 9.7E-18 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 PGJ_RS05930 edcd7f9d0010747743f314c054558a9f 275 SUPERFAMILY SSF74653 199 251 8.89E-7 T 22-04-2016 PGJ_RS05930 edcd7f9d0010747743f314c054558a9f 275 Gene3D G3DSA:3.30.1150.10 160 251 7.4E-6 T 22-04-2016 PGJ_RS04810 a2ff36485d586cb2c7a4e4db41df4a3e 383 SUPERFAMILY SSF116734 10 212 1.8E-33 T 22-04-2016 PGJ_RS04810 a2ff36485d586cb2c7a4e4db41df4a3e 383 PANTHER PTHR30408:SF7 47 201 2.8E-14 T 22-04-2016 PGJ_RS04810 a2ff36485d586cb2c7a4e4db41df4a3e 383 SUPERFAMILY SSF116734 208 382 2.78E-21 T 22-04-2016 PGJ_RS04810 a2ff36485d586cb2c7a4e4db41df4a3e 383 Pfam PF01420 Type I restriction modification DNA specificity domain 20 184 1.7E-11 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PGJ_RS04810 a2ff36485d586cb2c7a4e4db41df4a3e 383 Pfam PF01420 Type I restriction modification DNA specificity domain 213 369 7.8E-9 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PGJ_RS04810 a2ff36485d586cb2c7a4e4db41df4a3e 383 PANTHER PTHR30408 47 201 2.8E-14 T 22-04-2016 PGJ_RS08775 8b70c003fc29fbb34d751eae22a01315 234 SUPERFAMILY SSF46689 7 76 2.36E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 PGJ_RS08775 8b70c003fc29fbb34d751eae22a01315 234 Gene3D G3DSA:1.10.357.10 6 169 2.5E-9 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PGJ_RS01935 c20609aa05d205082fd45b0af8b02655 327 SUPERFAMILY SSF53300 86 263 1.93E-43 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS01935 c20609aa05d205082fd45b0af8b02655 327 Pfam PF07584 Aerotolerance regulator N-terminal 1 74 2.0E-14 T 22-04-2016 IPR024163 Aerotolerance regulator, N-terminal PGJ_RS01935 c20609aa05d205082fd45b0af8b02655 327 Pfam PF00092 von Willebrand factor type A domain 89 279 6.6E-33 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS01935 c20609aa05d205082fd45b0af8b02655 327 Gene3D G3DSA:3.40.50.410 87 283 5.1E-32 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS01935 c20609aa05d205082fd45b0af8b02655 327 PANTHER PTHR22550 1 321 1.4E-81 T 22-04-2016 PGJ_RS01935 c20609aa05d205082fd45b0af8b02655 327 SMART SM00327 87 286 1.4E-23 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS01935 c20609aa05d205082fd45b0af8b02655 327 PANTHER PTHR22550:SF8 1 321 1.4E-81 T 22-04-2016 PGJ_RS02030 22c66b32e31ba3875ef419cccda33f1f 268 PANTHER PTHR30269:SF14 1 267 9.9E-44 T 22-04-2016 PGJ_RS02030 22c66b32e31ba3875ef419cccda33f1f 268 Pfam PF01925 Sulfite exporter TauE/SafE 7 260 2.1E-48 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PGJ_RS02030 22c66b32e31ba3875ef419cccda33f1f 268 PANTHER PTHR30269 1 267 9.9E-44 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PGJ_RS03240 2176ae6d8f353bf868a25fc1c4e13c63 120 PANTHER PTHR35810 1 104 1.4E-23 T 22-04-2016 PGJ_RS06385 0f983335cdbc8b7c0f9dd066cd9fe67a 539 Gene3D G3DSA:3.40.50.880 290 535 5.0E-94 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS06385 0f983335cdbc8b7c0f9dd066cd9fe67a 539 Gene3D G3DSA:3.40.50.300 3 285 1.0E-130 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06385 0f983335cdbc8b7c0f9dd066cd9fe67a 539 Pfam PF06418 CTP synthase N-terminus 5 267 1.1E-123 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PGJ_RS06385 0f983335cdbc8b7c0f9dd066cd9fe67a 539 TIGRFAM TIGR00337 PyrG: CTP synthase 4 528 2.9E-230 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PGJ_RS06385 0f983335cdbc8b7c0f9dd066cd9fe67a 539 SUPERFAMILY SSF52317 292 536 5.68E-74 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like PGJ_RS06385 0f983335cdbc8b7c0f9dd066cd9fe67a 539 Pfam PF00117 Glutamine amidotransferase class-I 304 527 3.2E-51 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PGJ_RS06385 0f983335cdbc8b7c0f9dd066cd9fe67a 539 Hamap MF_01227 CTP synthase [pyrG]. 4 534 47.917 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PGJ_RS06385 0f983335cdbc8b7c0f9dd066cd9fe67a 539 PANTHER PTHR11550 1 531 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PGJ_RS06385 0f983335cdbc8b7c0f9dd066cd9fe67a 539 SUPERFAMILY SSF52540 4 269 2.87E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS06800 05f3eea22065ebba837fcd8c2d4c985d 247 PIRSF PIRSF016557 23 245 2.0E-33 T 22-04-2016 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 UniPathway: UPA00934 PGJ_RS06800 05f3eea22065ebba837fcd8c2d4c985d 247 SUPERFAMILY SSF89550 23 244 4.32E-15 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PGJ_RS06800 05f3eea22065ebba837fcd8c2d4c985d 247 PANTHER PTHR39181:SF1 24 224 7.4E-33 T 22-04-2016 PGJ_RS06800 05f3eea22065ebba837fcd8c2d4c985d 247 PANTHER PTHR39181 24 224 7.4E-33 T 22-04-2016 PGJ_RS09095 e7a16abacd5446bd236308b8099d99fb 303 Pfam PF00520 Ion transport protein 30 241 3.2E-32 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 PGJ_RS09095 e7a16abacd5446bd236308b8099d99fb 303 PANTHER PTHR11537 14 278 1.9E-86 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS09095 e7a16abacd5446bd236308b8099d99fb 303 PRINTS PR00169 Potassium channel signature 215 241 1.6E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS09095 e7a16abacd5446bd236308b8099d99fb 303 PRINTS PR00169 Potassium channel signature 65 88 1.6E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS09095 e7a16abacd5446bd236308b8099d99fb 303 PRINTS PR00169 Potassium channel signature 127 153 1.6E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS09095 e7a16abacd5446bd236308b8099d99fb 303 PRINTS PR00169 Potassium channel signature 91 111 1.6E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS09095 e7a16abacd5446bd236308b8099d99fb 303 PRINTS PR00169 Potassium channel signature 156 179 1.6E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS09095 e7a16abacd5446bd236308b8099d99fb 303 PRINTS PR00169 Potassium channel signature 23 51 1.6E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS09095 e7a16abacd5446bd236308b8099d99fb 303 PRINTS PR00169 Potassium channel signature 186 208 1.6E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PGJ_RS09095 e7a16abacd5446bd236308b8099d99fb 303 PANTHER PTHR11537:SF137 14 278 1.9E-86 T 22-04-2016 PGJ_RS09095 e7a16abacd5446bd236308b8099d99fb 303 SUPERFAMILY SSF81324 29 243 2.58E-51 T 22-04-2016 PGJ_RS09095 e7a16abacd5446bd236308b8099d99fb 303 Gene3D G3DSA:1.10.287.70 30 243 1.7E-50 T 22-04-2016 PGJ_RS03115 6dd99d20f2bb74cbe1c8f5f5fecb33c8 103 Pfam PF11950 Protein of unknown function (DUF3467) 6 83 4.7E-27 T 22-04-2016 IPR021857 Protein of unknown function DUF3467 PGJ_RS02150 efb0ef16fa8ccae80e68f29d82f5c848 414 PANTHER PTHR30217 1 414 1.4E-143 T 22-04-2016 PGJ_RS02150 efb0ef16fa8ccae80e68f29d82f5c848 414 ProSitePatterns PS01276 Peptidase family U32 signature. 172 190 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PGJ_RS02150 efb0ef16fa8ccae80e68f29d82f5c848 414 PANTHER PTHR30217:SF6 1 414 1.4E-143 T 22-04-2016 PGJ_RS02150 efb0ef16fa8ccae80e68f29d82f5c848 414 Gene3D G3DSA:2.40.30.10 343 398 1.1E-5 T 22-04-2016 PGJ_RS02150 efb0ef16fa8ccae80e68f29d82f5c848 414 Pfam PF01136 Peptidase family U32 81 312 4.9E-70 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PGJ_RS02150 efb0ef16fa8ccae80e68f29d82f5c848 414 SUPERFAMILY SSF50447 339 411 1.23E-5 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain PGJ_RS05965 a5b6fcdb59502db49172c5aedb30066e 288 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 216 285 2.7E-9 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS06545 5cafb19b9e302c2b91c15b361254eee0 396 PANTHER PTHR34985 13 331 7.0E-26 T 22-04-2016 PGJ_RS06545 5cafb19b9e302c2b91c15b361254eee0 396 Pfam PF05272 Virulence-associated protein E 102 283 2.8E-25 T 22-04-2016 IPR007936 Virulence-associated E PGJ_RS04280 598dac970886c443926db6db3779a1c0 258 Pfam PF14060 Domain of unknown function (DUF4252) 6 156 1.6E-23 T 22-04-2016 IPR025348 Protein of unknown function DUF4252 PGJ_RS05570 12c392ca2b87ce0c6c5b5215612ec2eb 143 Gene3D G3DSA:1.10.8.340 67 141 1.3E-27 T 22-04-2016 PGJ_RS05570 12c392ca2b87ce0c6c5b5215612ec2eb 143 SUPERFAMILY SSF140753 5 141 4.45E-56 T 22-04-2016 PGJ_RS05570 12c392ca2b87ce0c6c5b5215612ec2eb 143 Gene3D G3DSA:1.10.8.330 6 66 3.5E-25 T 22-04-2016 PGJ_RS05570 12c392ca2b87ce0c6c5b5215612ec2eb 143 Pfam PF08989 Domain of unknown function (DUF1896) 5 141 1.5E-52 T 22-04-2016 IPR015082 Protein of unknown function DUF1896 PGJ_RS03255 145a4da9eb5306c2f978d6bb3a09a4a3 335 Pfam PF06580 Histidine kinase 174 245 4.0E-9 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 PGJ_RS03255 145a4da9eb5306c2f978d6bb3a09a4a3 335 PANTHER PTHR34220:SF1 13 309 6.2E-20 T 22-04-2016 PGJ_RS03255 145a4da9eb5306c2f978d6bb3a09a4a3 335 PANTHER PTHR34220 13 309 6.2E-20 T 22-04-2016 PGJ_RS04235 f8ce56749aeb04bc4583d26933fc6c08 104 SUPERFAMILY SSF47413 14 70 3.56E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS04235 f8ce56749aeb04bc4583d26933fc6c08 104 Gene3D G3DSA:1.10.260.40 8 70 3.4E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PGJ_RS02460 9c9ff43dc83bf537ed35e34265aa1b42 200 Pfam PF14123 Domain of unknown function (DUF4290) 1 173 3.3E-76 T 22-04-2016 IPR025632 Protein of unknown function DUF4290 PGJ_RS09955 2e8766bc84a34391bd182d13fd57ac73 60 Pfam PF04324 BFD-like [2Fe-2S] binding domain 7 57 1.4E-19 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.9E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.9E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.9E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 SUPERFAMILY SSF51735 5 248 1.14E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.5E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.5E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.5E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.5E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.5E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 3.5E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 8.3E-6 T 22-04-2016 PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 247 2.1E-69 T 22-04-2016 PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PANTHER PTHR24322:SF328 11 140 4.0E-57 T 22-04-2016 PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PANTHER PTHR24322:SF328 156 188 4.0E-57 T 22-04-2016 PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 246 2.2E-102 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 Gene3D G3DSA:3.40.50.720 2 248 1.1E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PANTHER PTHR24322 11 140 4.0E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS03035 d74f31f272ce4a4f5dfae16789f651b1 248 PANTHER PTHR24322 156 188 4.0E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PGJ_RS02835 39bc80f0ed34286768d749ee5ac1a3d8 151 Gene3D G3DSA:2.40.320.10 1 147 3.7E-53 T 22-04-2016 IPR023577 CYTH domain PGJ_RS02835 39bc80f0ed34286768d749ee5ac1a3d8 151 Pfam PF01928 CYTH domain 2 135 7.3E-13 T 22-04-2016 IPR023577 CYTH domain PGJ_RS02835 39bc80f0ed34286768d749ee5ac1a3d8 151 PIRSF PIRSF016487 1 151 2.7E-63 T 22-04-2016 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like PGJ_RS02835 39bc80f0ed34286768d749ee5ac1a3d8 151 SUPERFAMILY SSF55154 1 147 9.65E-43 T 22-04-2016 IPR033469 CYTH-like domain PGJ_RS02835 39bc80f0ed34286768d749ee5ac1a3d8 151 PANTHER PTHR40114 1 148 9.7E-39 T 22-04-2016 PGJ_RS02835 39bc80f0ed34286768d749ee5ac1a3d8 151 SMART SM01118 1 148 2.6E-22 T 22-04-2016 IPR023577 CYTH domain PGJ_RS09105 d39e2a35b7f28f765ec7f788d0dc0455 149 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 2 138 3.8E-14 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PGJ_RS09105 d39e2a35b7f28f765ec7f788d0dc0455 149 SMART SM00701 2 119 0.0015 T 22-04-2016 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 PGJ_RS09105 d39e2a35b7f28f765ec7f788d0dc0455 149 PANTHER PTHR11022 3 149 4.2E-33 T 22-04-2016 IPR015510 Peptidoglycan recognition protein GO:0008745|GO:0009253 PGJ_RS09105 d39e2a35b7f28f765ec7f788d0dc0455 149 SUPERFAMILY SSF55846 3 146 3.01E-37 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PGJ_RS09105 d39e2a35b7f28f765ec7f788d0dc0455 149 Gene3D G3DSA:3.40.80.10 2 147 4.9E-39 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PGJ_RS07730 d38f37548ead784038aa49cb114d9bbe 294 Pfam PF11276 Protein of unknown function (DUF3078) 45 134 3.3E-24 T 22-04-2016 IPR021428 Protein of unknown function DUF3078 PGJ_RS09165 8da18309add1cd49888d74b68ec79bdc 91 Pfam PF12732 YtxH-like protein 9 88 6.7E-14 T 22-04-2016 IPR024623 Uncharacterised protein family YtxH PGJ_RS09270 a66b506bb30f3df5a5c83fdd0f6d48db 286 PANTHER PTHR37323 84 257 2.7E-16 T 22-04-2016 PGJ_RS09270 a66b506bb30f3df5a5c83fdd0f6d48db 286 SUPERFAMILY SSF69593 147 267 4.84E-7 T 22-04-2016 PGJ_RS09270 a66b506bb30f3df5a5c83fdd0f6d48db 286 PANTHER PTHR37323:SF1 84 257 2.7E-16 T 22-04-2016 PGJ_RS09625 ab9947233fba8f6718caa12bc308543e 176 PANTHER PTHR10587 32 176 5.2E-31 T 22-04-2016 PGJ_RS09625 ab9947233fba8f6718caa12bc308543e 176 SUPERFAMILY SSF88713 19 176 8.62E-39 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PGJ_RS09625 ab9947233fba8f6718caa12bc308543e 176 Pfam PF01522 Polysaccharide deacetylase 31 127 1.4E-22 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PGJ_RS09625 ab9947233fba8f6718caa12bc308543e 176 Gene3D G3DSA:3.20.20.370 22 176 3.8E-38 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PGJ_RS00525 29cd4ff12cbde6dac861b1ddaabbfc48 159 SUPERFAMILY SSF47729 36 117 6.04E-9 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS07795 a89d1f01ebd69afa5026af1d30fdb22d 405 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 336 405 8.0E-10 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS01705 c515a48415f31e101792ea0981d10dec 249 PANTHER PTHR10953 16 168 2.4E-86 T 22-04-2016 PGJ_RS01705 c515a48415f31e101792ea0981d10dec 249 PANTHER PTHR10953 194 244 2.4E-86 T 22-04-2016 PGJ_RS01705 c515a48415f31e101792ea0981d10dec 249 Gene3D G3DSA:3.40.50.720 17 193 3.5E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS01705 c515a48415f31e101792ea0981d10dec 249 Gene3D G3DSA:3.40.50.720 225 248 3.5E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain PGJ_RS01705 c515a48415f31e101792ea0981d10dec 249 PANTHER PTHR10953:SF145 16 168 2.4E-86 T 22-04-2016 PGJ_RS01705 c515a48415f31e101792ea0981d10dec 249 PANTHER PTHR10953:SF145 194 244 2.4E-86 T 22-04-2016 PGJ_RS01705 c515a48415f31e101792ea0981d10dec 249 Pfam PF00899 ThiF family 20 246 1.4E-40 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PGJ_RS01705 c515a48415f31e101792ea0981d10dec 249 SUPERFAMILY SSF69572 17 248 8.11E-63 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 Gene3D G3DSA:3.30.1360.120 142 234 6.0E-49 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 Gene3D G3DSA:3.30.1360.120 1 52 6.0E-49 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 PIRSF PIRSF006487 1 362 4.7E-98 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 257 1.4E-93 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 PANTHER PTHR13847:SF5 2 360 5.2E-65 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 362 41.973 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 PANTHER PTHR13847 2 360 5.2E-65 T 22-04-2016 PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 Gene3D G3DSA:2.40.30.110 280 357 6.7E-28 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 361 1.4E-111 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 357 1.5E-22 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 Gene3D G3DSA:3.30.70.1400 53 138 1.5E-28 T 22-04-2016 PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 SUPERFAMILY SSF101790 274 361 2.29E-25 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PGJ_RS02085 61239d85418fb60eac8a91a4079520a5 362 SUPERFAMILY SSF103025 1 280 4.4E-94 T 22-04-2016 PGJ_RS01230 071d8aa9423080b01ca879ce615ab7ac 375 Gene3D G3DSA:3.40.630.30 219 340 2.5E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS01230 071d8aa9423080b01ca879ce615ab7ac 375 SUPERFAMILY SSF55729 141 340 8.75E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS01230 071d8aa9423080b01ca879ce615ab7ac 375 SUPERFAMILY SSF55729 5 113 8.75E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase PGJ_RS01230 071d8aa9423080b01ca879ce615ab7ac 375 PANTHER PTHR41368 2 375 3.8E-104 T 22-04-2016 PGJ_RS08895 e387821d748f0ef9922254858f2a9f6e 841 PANTHER PTHR38467 2 841 4.3E-269 T 22-04-2016 PGJ_RS08895 e387821d748f0ef9922254858f2a9f6e 841 SUPERFAMILY SSF52540 405 756 7.83E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08895 e387821d748f0ef9922254858f2a9f6e 841 Gene3D G3DSA:3.40.50.300 420 513 4.0E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08895 e387821d748f0ef9922254858f2a9f6e 841 Gene3D G3DSA:3.40.50.300 596 750 4.0E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08895 e387821d748f0ef9922254858f2a9f6e 841 TIGRFAM TIGR03783 Bac_Flav_CT_G: Bacteroides conjugation system ATPase, TraG family 1 831 0.0 T 22-04-2016 IPR022509 Conjugation system ATPase, TraG PGJ_RS08895 e387821d748f0ef9922254858f2a9f6e 841 Pfam PF12991 Domain of unknown function, B. Theta Gene description (DUF3875) 3 55 4.9E-26 T 22-04-2016 IPR024451 Domain of unknown function DUF3875 PGJ_RS05975 7ae492addd2b5d0941e1423685e37fc5 168 Gene3D G3DSA:3.30.70.1070 96 148 5.3E-5 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 PGJ_RS05975 7ae492addd2b5d0941e1423685e37fc5 168 SUPERFAMILY SSF110997 96 149 8.63E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 PGJ_RS05975 7ae492addd2b5d0941e1423685e37fc5 168 Pfam PF05036 Sporulation related domain 84 149 1.6E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 PGJ_RS08935 ad16510783e35e9749bcf5c76e75c57d 154 Pfam PF12988 Domain of unknown function, B. Theta Gene description (DUF3872) 9 140 5.5E-52 T 22-04-2016 IPR024355 Protein of unknown function DUF3872 PGJ_RS04025 70071e807192099078395cc3bad934ec 471 Pfam PF04932 O-Antigen ligase 278 408 3.5E-8 T 22-04-2016 IPR007016 O-antigen ligase-related PGJ_RS09420 cc17aeac59214ae9242484d9187d907c 529 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 458 528 1.8E-13 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS09420 cc17aeac59214ae9242484d9187d907c 529 Gene3D G3DSA:2.120.10.10 46 93 1.3E-6 T 22-04-2016 IPR011040 Sialidases PGJ_RS09420 cc17aeac59214ae9242484d9187d907c 529 Gene3D G3DSA:2.120.10.10 168 215 1.3E-6 T 22-04-2016 IPR011040 Sialidases PGJ_RS05405 f3c1fd55d7a85896c3cbe1beae32ee4e 327 Pfam PF13905 Thioredoxin-like 216 308 1.7E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS05405 f3c1fd55d7a85896c3cbe1beae32ee4e 327 SUPERFAMILY SSF52833 189 312 2.37E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS05405 f3c1fd55d7a85896c3cbe1beae32ee4e 327 Pfam PF17127 Domain of unknown function (DUF5106) 28 187 3.1E-42 T 22-04-2016 IPR033395 Domain of unknown function DUF5106 PGJ_RS05405 f3c1fd55d7a85896c3cbe1beae32ee4e 327 Gene3D G3DSA:3.40.30.10 185 324 3.9E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS06460 8850357f5b6a53786a31f14a39845185 286 Pfam PF01040 UbiA prenyltransferase family 26 244 1.1E-17 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PGJ_RS06460 8850357f5b6a53786a31f14a39845185 286 PANTHER PTHR11048 1 217 3.9E-39 T 22-04-2016 PGJ_RS06460 8850357f5b6a53786a31f14a39845185 286 PANTHER PTHR11048:SF5 1 217 3.9E-39 T 22-04-2016 PGJ_RS07480 b4437274fa34090f078e9bfa004d7e64 309 TIGRFAM TIGR03513 GldL_gliding: gliding motility-associated protein GldL 21 283 2.5E-121 T 22-04-2016 IPR019852 Gliding motility-associated protein, GldL PGJ_RS06040 33a3f1d5ff05743517f346282bf36e15 164 Gene3D G3DSA:3.40.30.10 4 163 5.0E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS06040 33a3f1d5ff05743517f346282bf36e15 164 SUPERFAMILY SSF52833 11 158 2.05E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold PGJ_RS00625 2f76a99057ead8d4df635c8e3dcae8c8 349 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 24 327 7.7E-41 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PGJ_RS00830 4eabfa6eccc63d68cbc5a6c6d7de8885 445 Pfam PF06321 Major fimbrial subunit protein (FimA) 19 206 1.4E-12 T 22-04-2016 IPR029141 Major fimbrial subunit protein, N-terminal PGJ_RS06740 bed1e3e9b0a3a10bb203f10275779e09 234 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 20 188 4.1E-13 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PGJ_RS06740 bed1e3e9b0a3a10bb203f10275779e09 234 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 23 187 1.7E-7 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related PGJ_RS04935 9a33d3a1e8e98a9c242e19941f38ee4d 263 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.581 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 PGJ_RS04935 9a33d3a1e8e98a9c242e19941f38ee4d 263 PANTHER PTHR11280 1 263 4.1E-172 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 PGJ_RS04935 9a33d3a1e8e98a9c242e19941f38ee4d 263 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 PGJ_RS04935 9a33d3a1e8e98a9c242e19941f38ee4d 263 Gene3D G3DSA:3.40.50.1360 1 261 3.3E-114 T 22-04-2016 PGJ_RS04935 9a33d3a1e8e98a9c242e19941f38ee4d 263 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 8 230 6.5E-24 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 PGJ_RS04935 9a33d3a1e8e98a9c242e19941f38ee4d 263 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 3.4E-126 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 PGJ_RS04935 9a33d3a1e8e98a9c242e19941f38ee4d 263 SUPERFAMILY SSF100950 1 262 1.17E-104 T 22-04-2016 PGJ_RS01785 214673bb329d643cb65e139614289bf9 251 Gene3D G3DSA:1.10.1060.10 114 248 1.9E-20 T 22-04-2016 PGJ_RS01785 214673bb329d643cb65e139614289bf9 251 SUPERFAMILY SSF54292 5 120 1.48E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PGJ_RS01785 214673bb329d643cb65e139614289bf9 251 Pfam PF12838 4Fe-4S dicluster domain 162 232 5.8E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PGJ_RS01785 214673bb329d643cb65e139614289bf9 251 PANTHER PTHR11921 9 251 1.2E-119 T 22-04-2016 PGJ_RS01785 214673bb329d643cb65e139614289bf9 251 PANTHER PTHR11921:SF13 9 251 1.2E-119 T 22-04-2016 PGJ_RS01785 214673bb329d643cb65e139614289bf9 251 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 62 70 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PGJ_RS01785 214673bb329d643cb65e139614289bf9 251 SUPERFAMILY SSF46548 123 248 2.09E-21 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PGJ_RS01785 214673bb329d643cb65e139614289bf9 251 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 124 5.0E-23 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PGJ_RS01785 214673bb329d643cb65e139614289bf9 251 Gene3D G3DSA:3.10.20.30 2 113 4.9E-28 T 22-04-2016 IPR012675 Beta-grasp domain PGJ_RS05630 c165b67b94c154e64f026c347c9225e1 409 Pfam PF03432 Relaxase/Mobilisation nuclease domain 49 211 6.3E-20 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 PGJ_RS03295 9b4d806eb6fb70fe3efa16a234521535 359 Pfam PF14350 Beta protein 5 354 1.0E-70 T 22-04-2016 IPR025683 Protein beta PGJ_RS04470 430d4da0a0412e54787cc65e6c86135b 240 Pfam PF16412 Domain of unknown function (DUF5020) 19 239 3.3E-99 T 22-04-2016 PGJ_RS02010 09ad11762680444f78d2f9689acad250 732 Pfam PF10593 Z1 domain 302 517 1.0E-33 T 22-04-2016 IPR018310 Putative endonuclease, Z1 domain PGJ_RS00500 56d34f7e287b6f8bcb955883aa621df9 328 PANTHER PTHR22916 3 320 1.7E-63 T 22-04-2016 PGJ_RS00500 56d34f7e287b6f8bcb955883aa621df9 328 Pfam PF00535 Glycosyl transferase family 2 6 134 1.9E-36 T 22-04-2016 IPR001173 Glycosyltransferase 2-like PGJ_RS00500 56d34f7e287b6f8bcb955883aa621df9 328 PANTHER PTHR22916:SF24 3 320 1.7E-63 T 22-04-2016 PGJ_RS00500 56d34f7e287b6f8bcb955883aa621df9 328 Gene3D G3DSA:3.90.550.10 2 197 5.0E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS00500 56d34f7e287b6f8bcb955883aa621df9 328 SUPERFAMILY SSF53448 3 214 1.18E-56 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PGJ_RS01800 feffe90caa1e8c6af7699a0a64388b3b 313 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 197 266 2.1E-9 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PGJ_RS01800 feffe90caa1e8c6af7699a0a64388b3b 313 SUPERFAMILY SSF74853 48 133 4.71E-8 T 22-04-2016 IPR001322 Lamin Tail Domain PGJ_RS01800 feffe90caa1e8c6af7699a0a64388b3b 313 Pfam PF00932 Lamin Tail Domain 24 138 6.6E-11 T 22-04-2016 IPR001322 Lamin Tail Domain PGJ_RS09920 e50d31697ea915ea3a9d9b4e5b9bb51d 84 Pfam PF04226 Transglycosylase associated protein 34 80 2.5E-9 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 PGJ_RS08205 0dc8d0fc5b1fe53f535f631a14059e27 459 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 59 153 4.3E-18 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 PGJ_RS08205 0dc8d0fc5b1fe53f535f631a14059e27 459 PANTHER PTHR11219 31 154 9.8E-20 T 22-04-2016 PGJ_RS04230 f18739611bff8deb10f1f26ef5b110c1 371 Pfam PF13657 HipA N-terminal domain 8 115 3.5E-15 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 PGJ_RS04230 f18739611bff8deb10f1f26ef5b110c1 371 PANTHER PTHR30124 205 360 1.7E-27 T 22-04-2016 PGJ_RS04230 f18739611bff8deb10f1f26ef5b110c1 371 PANTHER PTHR30124:SF2 205 360 1.7E-27 T 22-04-2016 PGJ_RS04230 f18739611bff8deb10f1f26ef5b110c1 371 Pfam PF07805 HipA-like N-terminal domain 159 225 3.9E-11 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 PGJ_RS04230 f18739611bff8deb10f1f26ef5b110c1 371 Pfam PF07804 HipA-like C-terminal domain 230 358 1.5E-22 T 22-04-2016 IPR012893 HipA-like, C-terminal PGJ_RS05670 9842a3f77874dc11f8d1fc1873ea4abe 99 Pfam PF13572 Domain of unknown function (DUF4134) 8 98 1.3E-38 T 22-04-2016 IPR025408 Protein of unknown function DUF4134 PGJ_RS01115 3114da2d2f55c9aefce7d854bbefebfe 370 Gene3D G3DSA:3.40.50.620 287 368 3.3E-8 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS01115 3114da2d2f55c9aefce7d854bbefebfe 370 Gene3D G3DSA:3.40.50.620 77 234 7.1E-28 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PGJ_RS01115 3114da2d2f55c9aefce7d854bbefebfe 370 PANTHER PTHR31964 66 236 1.8E-26 T 22-04-2016 PGJ_RS01115 3114da2d2f55c9aefce7d854bbefebfe 370 Pfam PF00582 Universal stress protein family 84 234 7.7E-18 T 22-04-2016 IPR006016 UspA GO:0006950 PGJ_RS01115 3114da2d2f55c9aefce7d854bbefebfe 370 PRINTS PR01438 Universal stress protein signature 212 234 4.8E-10 T 22-04-2016 IPR006015 Universal stress protein A PGJ_RS01115 3114da2d2f55c9aefce7d854bbefebfe 370 PRINTS PR01438 Universal stress protein signature 81 99 4.8E-10 T 22-04-2016 IPR006015 Universal stress protein A PGJ_RS01115 3114da2d2f55c9aefce7d854bbefebfe 370 PRINTS PR01438 Universal stress protein signature 194 206 4.8E-10 T 22-04-2016 IPR006015 Universal stress protein A PGJ_RS01115 3114da2d2f55c9aefce7d854bbefebfe 370 SUPERFAMILY SSF52402 246 369 2.68E-12 T 22-04-2016 PGJ_RS01115 3114da2d2f55c9aefce7d854bbefebfe 370 PANTHER PTHR31964:SF45 66 236 1.8E-26 T 22-04-2016 PGJ_RS01115 3114da2d2f55c9aefce7d854bbefebfe 370 SUPERFAMILY SSF52402 84 240 1.67E-27 T 22-04-2016 PGJ_RS01115 3114da2d2f55c9aefce7d854bbefebfe 370 Pfam PF09413 Putative prokaryotic signal transducing protein 16 66 2.0E-8 T 22-04-2016 IPR018551 Domain of unknown function DUF2007 PGJ_RS08930 684035737953f7200caa8cd0220e75a1 192 Pfam PF10626 Conjugative transposon protein TraO 26 192 6.6E-58 T 22-04-2016 IPR018899 Conjugative transposon, TraO PGJ_RS03460 7c22c2c4e003e3103e6dc1ac9d172f43 568 Pfam PF00664 ABC transporter transmembrane region 38 282 2.1E-27 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PGJ_RS03460 7c22c2c4e003e3103e6dc1ac9d172f43 568 SUPERFAMILY SSF52540 324 567 6.99E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03460 7c22c2c4e003e3103e6dc1ac9d172f43 568 Gene3D G3DSA:3.40.50.300 332 561 1.2E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03460 7c22c2c4e003e3103e6dc1ac9d172f43 568 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS03460 7c22c2c4e003e3103e6dc1ac9d172f43 568 Pfam PF00005 ABC transporter 348 497 5.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS03460 7c22c2c4e003e3103e6dc1ac9d172f43 568 PANTHER PTHR24222:SF29 19 567 2.6E-170 T 22-04-2016 PGJ_RS03460 7c22c2c4e003e3103e6dc1ac9d172f43 568 SUPERFAMILY SSF90123 17 317 8.89E-51 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PGJ_RS03460 7c22c2c4e003e3103e6dc1ac9d172f43 568 SMART SM00382 357 543 8.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS03460 7c22c2c4e003e3103e6dc1ac9d172f43 568 PANTHER PTHR24222 19 567 2.6E-170 T 22-04-2016 PGJ_RS03460 7c22c2c4e003e3103e6dc1ac9d172f43 568 Gene3D G3DSA:1.20.1560.10 13 313 1.2E-41 T 22-04-2016 PGJ_RS03820 1d8a5e33852f67a68c93400f228804bc 435 Pfam PF13440 Polysaccharide biosynthesis protein 41 339 2.0E-12 T 22-04-2016 PGJ_RS01490 c237e9ab6f0bb1f101edc6cebc2d28f0 250 SUPERFAMILY SSF53474 32 240 6.72E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold PGJ_RS01490 c237e9ab6f0bb1f101edc6cebc2d28f0 250 Pfam PF04301 Protein of unknown function (DUF452) 33 247 9.3E-58 T 22-04-2016 IPR007398 Protein of unknown function DUF452 PGJ_RS09350 8aabda671c4c688355e19df7c8179fc6 139 Pfam PF11325 Domain of unknown function (DUF3127) 5 88 6.8E-29 T 22-04-2016 IPR021474 Protein of unknown function DUF3127 PGJ_RS03165 37c9265c4383c679c7caba6838bf788d 333 Pfam PF03432 Relaxase/Mobilisation nuclease domain 10 248 1.6E-25 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 PGJ_RS04225 0e7e43b803ce053deab13865335eb7ea 208 Gene3D G3DSA:1.25.10.10 24 179 7.0E-8 T 22-04-2016 IPR011989 Armadillo-like helical PGJ_RS04225 0e7e43b803ce053deab13865335eb7ea 208 Pfam PF08713 DNA alkylation repair enzyme 21 182 4.9E-14 T 22-04-2016 IPR014825 DNA alkylation repair enzyme PGJ_RS04225 0e7e43b803ce053deab13865335eb7ea 208 SUPERFAMILY SSF48371 20 201 3.01E-36 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 PGJ_RS00985 d2b12c40965dc95b432325b385bba484 150 Pfam PF14060 Domain of unknown function (DUF4252) 9 106 6.2E-7 T 22-04-2016 IPR025348 Protein of unknown function DUF4252 PGJ_RS02305 d01a63a30a39d3c28c14293df7c4a939 951 PANTHER PTHR30189 108 532 1.3E-14 T 22-04-2016 PGJ_RS02305 d01a63a30a39d3c28c14293df7c4a939 951 PANTHER PTHR30189 832 929 1.3E-14 T 22-04-2016 PGJ_RS02305 d01a63a30a39d3c28c14293df7c4a939 951 PANTHER PTHR30189 552 762 1.3E-14 T 22-04-2016 PGJ_RS09065 7e2b6c172a6556001e1fa3ce7b8a9640 211 Pfam PF14127 Domain of unknown function (DUF4294) 48 204 5.1E-60 T 22-04-2016 IPR025636 Protein of unknown function DUF4294 PGJ_RS03275 a9c250ae9cacd5c4f10912435bb0e982 108 Pfam PF09357 RteC protein 12 99 1.1E-26 T 22-04-2016 IPR018534 Tetracycline regulation of excision, RteC PGJ_RS04545 02ea34d17dcbaf9d82885c2ef66383ad 407 Pfam PF02687 FtsX-like permease family 280 401 5.3E-13 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PGJ_RS04545 02ea34d17dcbaf9d82885c2ef66383ad 407 PANTHER PTHR30489 7 402 4.3E-32 T 22-04-2016 PGJ_RS08525 7906e46d651dec66856602a6b671fc64 755 PANTHER PTHR11101 1 86 1.3E-32 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PGJ_RS08525 7906e46d651dec66856602a6b671fc64 755 PANTHER PTHR11101 396 602 1.3E-32 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PGJ_RS08525 7906e46d651dec66856602a6b671fc64 755 PANTHER PTHR11101:SF16 1 86 1.3E-32 T 22-04-2016 PGJ_RS08525 7906e46d651dec66856602a6b671fc64 755 PANTHER PTHR11101:SF16 396 602 1.3E-32 T 22-04-2016 PGJ_RS08525 7906e46d651dec66856602a6b671fc64 755 Pfam PF01384 Phosphate transporter family 26 327 2.1E-23 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PGJ_RS05315 6c8b2075c7e7493c60b164d8ec4a308f 1530 Pfam PF14229 Domain of unknown function (DUF4332) 117 203 5.8E-14 T 22-04-2016 IPR025567 Domain of unknown function DUF4332 KEGG: 00970+6.1.1.6 PGJ_RS03080 f69cf65fc89e50664f852ba6b4e343aa 361 Pfam PF05598 Transposase domain (DUF772) 59 133 1.1E-22 T 22-04-2016 IPR008490 Transposase InsH, N-terminal PGJ_RS03080 f69cf65fc89e50664f852ba6b4e343aa 361 Pfam PF01609 Transposase DDE domain 143 348 3.5E-48 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PGJ_RS03080 f69cf65fc89e50664f852ba6b4e343aa 361 PANTHER PTHR35604 12 177 1.9E-30 T 22-04-2016 PGJ_RS03080 f69cf65fc89e50664f852ba6b4e343aa 361 PANTHER PTHR35604 203 359 1.9E-30 T 22-04-2016 PGJ_RS02005 52c023ea647fd5146d5b07878dd9536f 329 Pfam PF14390 Putative PD-(D/E)XK family member, (DUF4420) 9 306 1.9E-35 T 22-04-2016 IPR025534 Putative PD-(D/E)XK family member (DUF4420) PGJ_RS06555 79084a64336be29ffc0e200a93cf1510 418 Pfam PF01076 Plasmid recombination enzyme 2 211 1.1E-24 T 22-04-2016 IPR001668 Plasmid recombination enzyme GO:0003677|GO:0005727|GO:0006310 PGJ_RS01000 f3e35e70558585290221cc63546f3709 367 Gene3D G3DSA:2.20.110.10 111 191 9.8E-11 T 22-04-2016 PGJ_RS01000 f3e35e70558585290221cc63546f3709 367 SUPERFAMILY SSF82185 111 191 4.18E-15 T 22-04-2016 PGJ_RS01830 1001b689d22857185aa9d7a4c1d0caec 776 SUPERFAMILY SSF101898 384 674 6.02E-13 T 22-04-2016 PGJ_RS01830 1001b689d22857185aa9d7a4c1d0caec 776 Gene3D G3DSA:2.120.10.30 662 727 1.8E-7 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PGJ_RS01830 1001b689d22857185aa9d7a4c1d0caec 776 Gene3D G3DSA:2.120.10.30 547 567 1.8E-7 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PGJ_RS01830 1001b689d22857185aa9d7a4c1d0caec 776 Gene3D G3DSA:2.120.10.30 376 481 1.8E-7 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PGJ_RS01945 ad7b991c698866a2b8ce44e60b82226e 290 PANTHER PTHR33608 1 289 3.0E-94 T 22-04-2016 PGJ_RS01945 ad7b991c698866a2b8ce44e60b82226e 290 SUPERFAMILY SSF53300 73 212 1.14E-14 T 22-04-2016 IPR002035 von Willebrand factor, type A PGJ_RS01945 ad7b991c698866a2b8ce44e60b82226e 290 PANTHER PTHR33608:SF5 1 289 3.0E-94 T 22-04-2016 PGJ_RS01945 ad7b991c698866a2b8ce44e60b82226e 290 Pfam PF01882 Protein of unknown function DUF58 38 122 1.3E-24 T 22-04-2016 IPR002881 Domain of unknown function DUF58 PGJ_RS00825 49b964438fbdf61f2b19ded53236474b 318 Pfam PF08842 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 32 313 2.8E-43 T 22-04-2016 IPR014941 Fimbrillin-A associated anchor protein Mfa1/Mfa2 PGJ_RS01420 8ac1ebead0b16285fd7825009c5ce684 215 SUPERFAMILY SSF89392 35 215 7.85E-5 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX PGJ_RS01420 8ac1ebead0b16285fd7825009c5ce684 215 Pfam PF16584 Outer membrane lipoprotein carrier protein LolA 28 170 2.4E-9 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PGJ_RS03345 58f26ee264a473c717dba8f4ad2fb747 404 Pfam PF05272 Virulence-associated protein E 130 293 7.3E-27 T 22-04-2016 IPR007936 Virulence-associated E PGJ_RS03345 58f26ee264a473c717dba8f4ad2fb747 404 PANTHER PTHR34985 12 404 7.2E-23 T 22-04-2016 PGJ_RS01265 84571240ef76de211b1425c966e0e325 184 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PGJ_RS01265 84571240ef76de211b1425c966e0e325 184 PRINTS PR00502 NUDIX hydrolase family signature 75 89 1.7E-5 T 22-04-2016 IPR020476 NUDIX hydrolase PGJ_RS01265 84571240ef76de211b1425c966e0e325 184 PRINTS PR00502 NUDIX hydrolase family signature 89 104 1.7E-5 T 22-04-2016 IPR020476 NUDIX hydrolase PGJ_RS01265 84571240ef76de211b1425c966e0e325 184 PANTHER PTHR22769 4 169 6.7E-44 T 22-04-2016 PGJ_RS01265 84571240ef76de211b1425c966e0e325 184 SUPERFAMILY SSF55811 15 179 4.47E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PGJ_RS01265 84571240ef76de211b1425c966e0e325 184 Gene3D G3DSA:3.90.79.10 33 179 9.3E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PGJ_RS01265 84571240ef76de211b1425c966e0e325 184 PANTHER PTHR22769:SF37 4 169 6.7E-44 T 22-04-2016 PGJ_RS01265 84571240ef76de211b1425c966e0e325 184 Pfam PF00293 NUDIX domain 48 158 1.8E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PGJ_RS01045 d7e854d4edb6dbfb88b3c07037b59f60 170 Pfam PF07877 Protein of unknown function (DUF1661) 31 60 7.5E-8 T 22-04-2016 IPR012456 Protein of unknown function DUF1661 PGJ_RS05935 742c78a0ecaebeaec701f773bd21d5d4 139 PANTHER PTHR30558 14 136 2.6E-24 T 22-04-2016 PGJ_RS05935 742c78a0ecaebeaec701f773bd21d5d4 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 5.1E-25 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PGJ_RS02740 4ec577e2ef52bf0be43ad9506f3a12fd 214 Pfam PF00753 Metallo-beta-lactamase superfamily 17 197 2.7E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS02740 4ec577e2ef52bf0be43ad9506f3a12fd 214 Gene3D G3DSA:3.60.15.10 12 213 2.9E-50 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS02740 4ec577e2ef52bf0be43ad9506f3a12fd 214 SMART SM00849 15 197 2.0E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS02740 4ec577e2ef52bf0be43ad9506f3a12fd 214 PANTHER PTHR11935 17 213 4.8E-57 T 22-04-2016 PGJ_RS02740 4ec577e2ef52bf0be43ad9506f3a12fd 214 SUPERFAMILY SSF56281 16 213 1.15E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase PGJ_RS10015 15f8b028c738a58978eedf63120816b8 98 Gene3D G3DSA:1.10.10.10 3 91 8.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS10015 15f8b028c738a58978eedf63120816b8 98 SUPERFAMILY SSF46785 7 90 1.11E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PGJ_RS10015 15f8b028c738a58978eedf63120816b8 98 Pfam PF13601 Winged helix DNA-binding domain 13 92 1.3E-31 T 22-04-2016 IPR027395 Winged helix DNA-binding domain PGJ_RS10015 15f8b028c738a58978eedf63120816b8 98 PANTHER PTHR37318 1 97 7.6E-27 T 22-04-2016 PGJ_RS07160 27530226fd1726558a868439dd8d9f50 686 Pfam PF14121 Putative porin 54 685 2.5E-176 T 22-04-2016 IPR025631 Putative porin-10 PGJ_RS02115 1af6518b540623d2e27aa557709c4e2e 216 Pfam PF14064 HmuY protein 48 211 1.2E-25 T 22-04-2016 IPR025921 HmuY protein PGJ_RS05825 ba49423715bdfbcf535a2a68d8770763 390 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 320 387 2.9E-8 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS03125 f9f8ddc8c2f52ff5cd63e1144b6d76df 110 SMART SM01409 19 73 5.4E-5 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS03125 f9f8ddc8c2f52ff5cd63e1144b6d76df 110 Gene3D G3DSA:3.90.940.10 19 98 4.2E-4 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS03125 f9f8ddc8c2f52ff5cd63e1144b6d76df 110 Pfam PF01192 RNA polymerase Rpb6 19 97 4.3E-8 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PGJ_RS05085 294566f92523424680d723e1095760b8 713 SUPERFAMILY SSF49265 247 341 1.21E-5 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 PGJ_RS05085 294566f92523424680d723e1095760b8 713 Gene3D G3DSA:2.60.40.10 258 334 2.9E-7 T 22-04-2016 IPR013783 Immunoglobulin-like fold PGJ_RS01920 fdac4ab0c6013539798ea47771e0f5ba 566 Pfam PF13584 Oxygen tolerance 1 467 2.4E-143 T 22-04-2016 IPR025738 Aerotolerance-related protein BatD PGJ_RS04565 df342e6f834e46fdfda09cae7b42ddec 131 Pfam PF04138 GtrA-like protein 12 127 2.9E-26 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 PGJ_RS04565 df342e6f834e46fdfda09cae7b42ddec 131 PANTHER PTHR38459 4 131 2.8E-14 T 22-04-2016 PGJ_RS04100 62b023ef3993b61064e92915e42f1e19 457 Pfam PF13585 C-terminal domain of CHU protein family 357 440 4.0E-16 T 22-04-2016 PGJ_RS04100 62b023ef3993b61064e92915e42f1e19 457 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 358 429 5.0E-11 T 22-04-2016 IPR026341 Gliding motility-associated, C-terminal domain PGJ_RS06195 2c062d940c5dc744db0b25e346f15f03 518 Pfam PF00932 Lamin Tail Domain 248 346 3.6E-8 T 22-04-2016 IPR001322 Lamin Tail Domain PGJ_RS03220 b706adba2d2a82477a446f087df7d9b8 235 SMART SM00382 29 218 7.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain PGJ_RS03220 b706adba2d2a82477a446f087df7d9b8 235 Pfam PF00005 ABC transporter 20 169 2.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PGJ_RS03220 b706adba2d2a82477a446f087df7d9b8 235 SUPERFAMILY SSF52540 4 220 9.94E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03220 b706adba2d2a82477a446f087df7d9b8 235 PANTHER PTHR24220 6 219 5.2E-59 T 22-04-2016 PGJ_RS03220 b706adba2d2a82477a446f087df7d9b8 235 Gene3D G3DSA:3.40.50.300 2 219 4.9E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03220 b706adba2d2a82477a446f087df7d9b8 235 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PGJ_RS05660 d48c04c21fe2e78c179d90c072bf62e0 246 SUPERFAMILY SSF52540 5 210 5.32E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS05660 d48c04c21fe2e78c179d90c072bf62e0 246 PANTHER PTHR13696 4 219 7.3E-13 T 22-04-2016 PGJ_RS05660 d48c04c21fe2e78c179d90c072bf62e0 246 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 147 1.1E-8 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PGJ_RS05660 d48c04c21fe2e78c179d90c072bf62e0 246 Gene3D G3DSA:3.40.50.300 7 206 2.2E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS07555 32454a663a0732250afeaa521fae3cb4 74 Pfam PF11823 Protein of unknown function (DUF3343) 9 71 1.8E-13 T 22-04-2016 IPR021778 Protein of unknown function DUF3343 PGJ_RS03195 86cce31deab32cb849f2b1c7d0b812d7 300 PANTHER PTHR30482 2 275 8.0E-75 T 22-04-2016 PGJ_RS03195 86cce31deab32cb849f2b1c7d0b812d7 300 Pfam PF02653 Branched-chain amino acid transport system / permease component 4 275 7.7E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PGJ_RS03195 86cce31deab32cb849f2b1c7d0b812d7 300 PANTHER PTHR30482:SF10 2 275 8.0E-75 T 22-04-2016 PGJ_RS09115 411927851b132d6d9b65ef7f69924205 243 Pfam PF13505 Outer membrane protein beta-barrel domain 6 243 1.0E-8 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel PGJ_RS09115 411927851b132d6d9b65ef7f69924205 243 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 235 243 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 PGJ_RS00820 a6d42bc2152b8ad44b099731257beaf8 492 Pfam PF15495 Major fimbrial subunit protein type IV, Fimbrillin, C-terminal 384 489 9.0E-15 T 22-04-2016 IPR029140 Major fimbrial subunit protein, C-terminal PGJ_RS00820 a6d42bc2152b8ad44b099731257beaf8 492 Pfam PF06321 Major fimbrial subunit protein (FimA) 10 321 3.5E-10 T 22-04-2016 IPR029141 Major fimbrial subunit protein, N-terminal PGJ_RS09960 f0cac12719fd02c2afcd46c144d2d94b 424 Pfam PF11013 Protein of unknown function (DUF2851) 2 376 4.7E-128 T 22-04-2016 IPR021272 Protein of unknown function DUF2851 PGJ_RS02090 5e27fdb1881f5e971954e26350e956e2 108 Pfam PF09919 Uncharacterized conserved protein (DUF2149) 16 107 1.3E-32 T 22-04-2016 IPR018676 Protein of unknown function DUF2149 PGJ_RS07740 feadfb3c3f5b0cd27b2083bfd9ed347a 75 Pfam PF07863 Homologues of TraJ from Bacteroides conjugative transposon 2 51 1.9E-11 T 22-04-2016 IPR012424 Conjugative transposon, TraJ, C-terminal PGJ_RS03725 997ca4aea3ccf7635d464d9a917f81dc 448 PANTHER PTHR11206:SF153 14 445 3.3E-89 T 22-04-2016 PGJ_RS03725 997ca4aea3ccf7635d464d9a917f81dc 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 415 5.4E-72 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS03725 997ca4aea3ccf7635d464d9a917f81dc 448 Pfam PF01554 MatE 20 179 4.7E-23 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS03725 997ca4aea3ccf7635d464d9a917f81dc 448 Pfam PF01554 MatE 246 407 4.1E-26 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS03725 997ca4aea3ccf7635d464d9a917f81dc 448 PANTHER PTHR11206 14 445 3.3E-89 T 22-04-2016 PGJ_RS03725 997ca4aea3ccf7635d464d9a917f81dc 448 PIRSF PIRSF006603 5 448 1.3E-66 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PGJ_RS05175 ec60a75b0f6b47ea35e980fa9fce7d9a 234 Pfam PF13568 Outer membrane protein beta-barrel domain 19 200 2.4E-25 T 22-04-2016 IPR025665 Outer membrane protein beta-barrel domain PGJ_RS02765 2b5e384b5d769f507d1101dcf8203649 271 Pfam PF12864 Protein of unknown function (DUF3822) 11 264 1.5E-66 T 22-04-2016 IPR024213 Protein of unknown function DUF3822 PGJ_RS08945 f2978002dda6f10fcc5df1ea245bee7c 155 Pfam PF03703 Bacterial PH domain 70 130 4.6E-10 T 22-04-2016 IPR005182 Domain of unknown function DUF304 PGJ_RS08945 f2978002dda6f10fcc5df1ea245bee7c 155 PANTHER PTHR37938 1 155 2.9E-18 T 22-04-2016 PGJ_RS08945 f2978002dda6f10fcc5df1ea245bee7c 155 PANTHER PTHR37938:SF1 1 155 2.9E-18 T 22-04-2016 PGJ_RS00835 cdbb79242cc9fe2eb1473a74b9193e93 335 Pfam PF06321 Major fimbrial subunit protein (FimA) 16 226 8.7E-10 T 22-04-2016 IPR029141 Major fimbrial subunit protein, N-terminal PGJ_RS06980 5e8ad732ac51772c52f617a4c03f48b6 102 Pfam PF05164 Cell division protein ZapA 10 95 5.5E-12 T 22-04-2016 IPR007838 Cell division protein ZapA-like PGJ_RS06980 5e8ad732ac51772c52f617a4c03f48b6 102 SUPERFAMILY SSF102829 10 96 6.15E-7 T 22-04-2016 IPR007838 Cell division protein ZapA-like PGJ_RS05730 9e9d2e11d0d2f2766324acd7dab3fbee 171 Gene3D G3DSA:1.10.530.40 39 168 8.2E-13 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 PGJ_RS05730 9e9d2e11d0d2f2766324acd7dab3fbee 171 SUPERFAMILY SSF53955 37 169 2.29E-16 T 22-04-2016 IPR023346 Lysozyme-like domain PGJ_RS08740 57c6031171882f2a457e1063db9a8aa8 64 SUPERFAMILY SSF46955 15 59 1.65E-5 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS08740 57c6031171882f2a457e1063db9a8aa8 64 Pfam PF12728 Helix-turn-helix domain 14 61 5.0E-8 T 22-04-2016 PGJ_RS05990 ee30934bd9eea3d45acd941c28a23490 182 Pfam PF07659 Domain of Unknown Function (DUF1599) 119 180 4.3E-27 T 22-04-2016 IPR011630 Clostridium phage phiCTP1, Gp74 PGJ_RS05990 ee30934bd9eea3d45acd941c28a23490 182 Pfam PF07659 Domain of Unknown Function (DUF1599) 26 86 3.5E-28 T 22-04-2016 IPR011630 Clostridium phage phiCTP1, Gp74 PGJ_RS07470 cdca83b3f04ee1ddc2a64558a99584e3 359 TIGRFAM TIGR03523 GldN: gliding motility associated protein GldN 4 292 8.2E-102 T 22-04-2016 IPR019847 Gliding motility associated protein GldN PGJ_RS01825 aae5de1c5c016e06dc93e3231b7f137f 467 Gene3D G3DSA:3.90.70.10 74 464 3.3E-145 T 22-04-2016 PGJ_RS01825 aae5de1c5c016e06dc93e3231b7f137f 467 PANTHER PTHR10363:SF4 1 467 3.9E-215 T 22-04-2016 PGJ_RS01825 aae5de1c5c016e06dc93e3231b7f137f 467 Pfam PF03051 Peptidase C1-like family 30 462 2.8E-134 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 PGJ_RS01825 aae5de1c5c016e06dc93e3231b7f137f 467 PANTHER PTHR10363 1 467 3.9E-215 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 PGJ_RS01825 aae5de1c5c016e06dc93e3231b7f137f 467 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 87 98 - T 22-04-2016 IPR000169 Cysteine peptidase, cysteine active site PGJ_RS01825 aae5de1c5c016e06dc93e3231b7f137f 467 SUPERFAMILY SSF54001 37 464 6.67E-109 T 22-04-2016 PGJ_RS01825 aae5de1c5c016e06dc93e3231b7f137f 467 PIRSF PIRSF005700 26 467 4.9E-149 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 PGJ_RS00865 2da1a8e9e97f5a71209f1749c18f6203 456 SUPERFAMILY SSF110296 325 409 1.44E-10 T 22-04-2016 PGJ_RS00865 2da1a8e9e97f5a71209f1749c18f6203 456 SUPERFAMILY SSF110296 177 283 1.44E-10 T 22-04-2016 PGJ_RS00865 2da1a8e9e97f5a71209f1749c18f6203 456 Gene3D G3DSA:2.130.10.140 174 334 1.2E-6 T 22-04-2016 PGJ_RS00865 2da1a8e9e97f5a71209f1749c18f6203 456 Gene3D G3DSA:2.130.10.10 335 401 1.5E-5 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PGJ_RS06205 798183ecceb502cd658aaa3e406f06d5 168 Gene3D G3DSA:4.10.520.10 37 112 9.5E-6 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS06205 798183ecceb502cd658aaa3e406f06d5 168 SUPERFAMILY SSF47729 36 112 1.34E-10 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS06205 798183ecceb502cd658aaa3e406f06d5 168 TIGRFAM TIGR01201 HU_rel: putative DNA-binding protein 1 168 2.8E-61 T 22-04-2016 IPR005902 Putative DNA-binding protein, HU-related PGJ_RS02865 798183ecceb502cd658aaa3e406f06d5 168 Gene3D G3DSA:4.10.520.10 37 112 9.5E-6 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS02865 798183ecceb502cd658aaa3e406f06d5 168 SUPERFAMILY SSF47729 36 112 1.34E-10 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PGJ_RS02865 798183ecceb502cd658aaa3e406f06d5 168 TIGRFAM TIGR01201 HU_rel: putative DNA-binding protein 1 168 2.8E-61 T 22-04-2016 IPR005902 Putative DNA-binding protein, HU-related PGJ_RS03120 39108f6a138281ee194c004493c4839b 152 Pfam PF14126 Domain of unknown function (DUF4293) 2 151 2.2E-40 T 22-04-2016 IPR025635 Protein of unknown function DUF4293 PGJ_RS04035 6fcc8ec018e3999f7e419d823a412da5 292 Pfam PF02470 MlaD protein 38 106 3.1E-9 T 22-04-2016 IPR003399 Mce/MlaD PGJ_RS04035 6fcc8ec018e3999f7e419d823a412da5 292 PANTHER PTHR33371:SF4 1 292 2.8E-23 T 22-04-2016 PGJ_RS04035 6fcc8ec018e3999f7e419d823a412da5 292 PANTHER PTHR33371 1 292 2.8E-23 T 22-04-2016 PGJ_RS01510 0ba06a3ce0661bcfe7e0114a71bb2e90 593 SUPERFAMILY SSF56935 107 593 5.04E-15 T 22-04-2016 PGJ_RS01510 0ba06a3ce0661bcfe7e0114a71bb2e90 593 Gene3D G3DSA:2.40.170.20 110 193 1.1E-10 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS01510 0ba06a3ce0661bcfe7e0114a71bb2e90 593 Gene3D G3DSA:2.40.170.20 243 593 1.1E-10 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS07005 94b5e9916540d9678bcd82f3a4e4b26b 96 Pfam PF05258 Protein of unknown function (DUF721) 9 95 1.0E-12 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 PGJ_RS02095 aab74ff2bd2e169e268219eeb704727a 192 Pfam PF01618 MotA/TolQ/ExbB proton channel family 100 177 1.6E-8 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PGJ_RS03300 085e8715032d3854ef2a2f7b4b6d5b3a 184 Pfam PF06114 Domain of unknown function (DUF955) 54 172 4.0E-24 T 22-04-2016 IPR010359 HTH domain, IrrE-type PGJ_RS07825 d9fb807b9c942e0500103402ea38b80f 204 Pfam PF01813 ATP synthase subunit D 11 190 1.0E-40 T 22-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 PGJ_RS01855 42501743388b7e9724373ec1c5e54622 262 Pfam PF14129 Domain of unknown function (DUF4296) 28 109 1.8E-17 T 22-04-2016 IPR025381 Domain of unknown function DUF4296 PGJ_RS01755 ee818ce5c7125f1a4d84794ed9f001b3 117 Pfam PF04977 Septum formation initiator 35 111 4.4E-8 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PGJ_RS04405 c3b16e6db1839ca6cc964359a673767f 286 Pfam PF14125 Domain of unknown function (DUF4292) 60 259 6.2E-44 T 22-04-2016 IPR025634 Protein of unknown function DUF4292 PGJ_RS03630 d78be35f1278ae6a883856e72ff1ce0e 198 Pfam PF16109 Domain of unknown function (DUF4827) 18 191 2.4E-33 T 22-04-2016 IPR032252 Protein of unknown function DUF4827 PGJ_RS08610 d6c7d94e078cdad9bf9120280239188e 668 Gene3D G3DSA:2.40.170.20 395 560 2.5E-4 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PGJ_RS07830 b041261ff4c921d4d99d4b3070d79488 604 PANTHER PTHR11629 254 346 1.8E-18 T 22-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 PGJ_RS07830 b041261ff4c921d4d99d4b3070d79488 604 Pfam PF01496 V-type ATPase 116kDa subunit family 511 602 1.2E-6 T 22-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 PGJ_RS07830 b041261ff4c921d4d99d4b3070d79488 604 Pfam PF01496 V-type ATPase 116kDa subunit family 189 349 9.8E-14 T 22-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 PGJ_RS07375 6aa32e2b817b5442824d5580246bb8e7 179 Pfam PF13858 Protein of unknown function (DUF4199) 14 169 2.8E-27 T 22-04-2016 IPR025250 Protein of unknown function DUF4199 PGJ_RS08890 6ea632487b014f82b9631d5a935ef9ad 111 Pfam PF13571 Domain of unknown function (DUF4133) 4 93 9.1E-40 T 22-04-2016 IPR025407 Protein of unknown function DUF4133 PGJ_RS05700 6f2394755c682c7a645e5578b4c6cbef 110 Pfam PF13150 Protein of unknown function (DUF3989) 7 89 6.5E-16 T 22-04-2016 IPR025050 Protein of unknown function DUF3989 PGJ_RS04005 a558f4dec971e58b38f5d829064f6e20 139 SUPERFAMILY SSF55620 4 138 1.0E-32 T 22-04-2016 PGJ_RS04005 a558f4dec971e58b38f5d829064f6e20 139 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 8 138 9.6E-26 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PGJ_RS04005 a558f4dec971e58b38f5d829064f6e20 139 PANTHER PTHR12589 6 137 9.8E-23 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PGJ_RS04005 a558f4dec971e58b38f5d829064f6e20 139 Gene3D G3DSA:3.30.479.10 2 137 3.4E-29 T 22-04-2016 PGJ_RS08150 9c38decd2620801ab41f4dd341b9a4c1 702 SUPERFAMILY SSF51445 28 340 2.0E-88 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily PGJ_RS08150 9c38decd2620801ab41f4dd341b9a4c1 702 Gene3D G3DSA:3.20.20.80 28 340 3.2E-86 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PGJ_RS08150 9c38decd2620801ab41f4dd341b9a4c1 702 PANTHER PTHR10030 33 343 1.2E-54 T 22-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 PGJ_RS08150 9c38decd2620801ab41f4dd341b9a4c1 702 Pfam PF01120 Alpha-L-fucosidase 30 337 1.2E-74 T 22-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 PGJ_RS08150 9c38decd2620801ab41f4dd341b9a4c1 702 SMART SM00812 25 381 4.1E-130 T 22-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 PGJ_RS08150 9c38decd2620801ab41f4dd341b9a4c1 702 PRINTS PR00741 Glycosyl hydrolase family 29 signature 108 124 1.6E-15 T 22-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 PGJ_RS08150 9c38decd2620801ab41f4dd341b9a4c1 702 PRINTS PR00741 Glycosyl hydrolase family 29 signature 323 345 1.6E-15 T 22-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 PGJ_RS08150 9c38decd2620801ab41f4dd341b9a4c1 702 PRINTS PR00741 Glycosyl hydrolase family 29 signature 290 311 1.6E-15 T 22-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 PGJ_RS08150 9c38decd2620801ab41f4dd341b9a4c1 702 PRINTS PR00741 Glycosyl hydrolase family 29 signature 154 173 1.6E-15 T 22-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 PGJ_RS08150 9c38decd2620801ab41f4dd341b9a4c1 702 PANTHER PTHR10030:SF25 33 343 1.2E-54 T 22-04-2016 PGJ_RS03895 21be5b56bdf4b21cd221893aaca8ba18 201 Pfam PF14063 Protein of unknown function (DUF4254) 39 181 3.8E-61 T 22-04-2016 IPR025350 Protein of unknown function DUF4254 PGJ_RS03465 078e7e7424843b56123abc9c9a180012 774 Gene3D G3DSA:3.40.50.300 413 529 1.2E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03465 078e7e7424843b56123abc9c9a180012 774 Gene3D G3DSA:3.40.50.300 274 348 1.2E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03465 078e7e7424843b56123abc9c9a180012 774 Gene3D G3DSA:3.40.50.300 601 730 1.2E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03465 078e7e7424843b56123abc9c9a180012 774 SUPERFAMILY SSF52540 269 394 3.67E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS03465 078e7e7424843b56123abc9c9a180012 774 SUPERFAMILY SSF52540 621 732 3.67E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PGJ_RS08920 780df361c23699fdd4fea694490f4b7c 411 Pfam PF12508 Protein of unknown function (DUF3714) 214 403 9.3E-67 T 22-04-2016 IPR022187 Conjugative transposon, TraM PGJ_RS08920 780df361c23699fdd4fea694490f4b7c 411 TIGRFAM TIGR03779 Bac_Flav_CT_M: Bacteroides conjugative transposon TraM protein 1 411 1.5E-140 T 22-04-2016 IPR022187 Conjugative transposon, TraM PGJ_RS03405 71d0afa8edbfa6c0fadfca4db6c4877e 626 Pfam PF03993 Domain of Unknown Function (DUF349) 273 350 2.2E-18 T 22-04-2016 IPR007139 Protein of unknown function DUF349 PGJ_RS03405 71d0afa8edbfa6c0fadfca4db6c4877e 626 Pfam PF03993 Domain of Unknown Function (DUF349) 432 504 3.9E-19 T 22-04-2016 IPR007139 Protein of unknown function DUF349 PGJ_RS03405 71d0afa8edbfa6c0fadfca4db6c4877e 626 Pfam PF03993 Domain of Unknown Function (DUF349) 121 191 2.4E-12 T 22-04-2016 IPR007139 Protein of unknown function DUF349 PGJ_RS03405 71d0afa8edbfa6c0fadfca4db6c4877e 626 Pfam PF03993 Domain of Unknown Function (DUF349) 196 269 6.2E-14 T 22-04-2016 IPR007139 Protein of unknown function DUF349 PGJ_RS03405 71d0afa8edbfa6c0fadfca4db6c4877e 626 Pfam PF03993 Domain of Unknown Function (DUF349) 356 427 8.0E-23 T 22-04-2016 IPR007139 Protein of unknown function DUF349 PGJ_RS05050 239c838e30750d226a42c5fb58bb4735 157 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 152 9.1E-13 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PGJ_RS07305 5d82892ce9bf87b00cb97539a4e9fa65 384 SUPERFAMILY SSF103473 228 248 3.4E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain PGJ_RS07305 5d82892ce9bf87b00cb97539a4e9fa65 384 SUPERFAMILY SSF103473 7 184 3.4E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain PGJ_RS08140 a4faf09b50fabdf4bf61e46cc6dac5d4 480 Pfam PF15495 Major fimbrial subunit protein type IV, Fimbrillin, C-terminal 395 477 2.8E-18 T 22-04-2016 IPR029140 Major fimbrial subunit protein, C-terminal PGJ_RS01275 ef55d7da939d05f975ec888052b4e4f8 145 Pfam PF05117 Family of unknown function (DUF695) 17 137 4.9E-22 T 22-04-2016 IPR016097 Domain of unknown function DUF695 PGJ_RS05675 84f3b8e2008abd8edc63934501db94b3 125 Pfam PF13571 Domain of unknown function (DUF4133) 6 96 1.8E-40 T 22-04-2016 IPR025407 Protein of unknown function DUF4133 PGJ_RS00015 074e575ce39f9e89ad77bafb5791c2f6 339 Pfam PF01757 Acyltransferase family 10 324 2.1E-27 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 PGJ_RS08885 9dd8d01c0b2c3907c93edf557c451b26 100 Pfam PF13572 Domain of unknown function (DUF4134) 8 99 2.2E-38 T 22-04-2016 IPR025408 Protein of unknown function DUF4134 PGJ_RS01160 246be83eb082f23ab8fa00822ab31e66 163 Pfam PF02674 Colicin V production protein 4 152 6.7E-25 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PGJ_RS03360 a3f254b1dff59af324e47650e9bb3324 307 Pfam PF03432 Relaxase/Mobilisation nuclease domain 9 240 1.4E-38 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 PGJ_RS01990 2420b7f1a6621c9c444e1aa4f84078ca 575 Pfam PF13910 Domain of unknown function (DUF4209) 478 566 1.0E-12 T 22-04-2016 IPR025209 Domain of unknown function DUF4209 PGJ_RS02750 6c9711561419ef15b7f26ff8d44277eb 443 Pfam PF11276 Protein of unknown function (DUF3078) 187 280 3.9E-25 T 22-04-2016 IPR021428 Protein of unknown function DUF3078 PGJ_RS05985 3de983389039c9bc9d6c320b52885f27 430 Pfam PF07681 DoxX 8 91 1.2E-7 T 22-04-2016 IPR032808 DoxX family PGJ_RS09385 d61764e9fafa8827a783e74afffc5161 1515 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1046 1486 3.7E-73 T 22-04-2016 IPR007452 Translocation and assembly module TamB PGJ_RS07705 dd2f2b47eb43b94f636646b7c8a23435 395 Pfam PF09594 Protein of unknown function (DUF2029) 65 294 1.6E-31 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 PGJ_RS09380 3506206cef15e5d2e46a1b8a4c9c3dbe 419 Pfam PF17116 Domain of unknown function (DUF5103) 34 322 8.2E-77 T 22-04-2016 IPR031345 Protein of unknown function DUF5103 PGJ_RS03850 eebe5d3975ced1215d54c46900182acd 347 Pfam PF14897 EpsG family 27 344 2.3E-49 T 22-04-2016 PGJ_RS00670 a42917b6e8b9c55c4733ab0e522a141b 128 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 68 5.3E-18 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PGJ_RS00670 a42917b6e8b9c55c4733ab0e522a141b 128 Pfam PF03840 Preprotein translocase SecG subunit 4 69 3.1E-17 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PGJ_RS00485 d09464a409c20c07e9df2bdf57e61d51 117 Pfam PF07863 Homologues of TraJ from Bacteroides conjugative transposon 2 53 2.0E-13 T 22-04-2016 IPR012424 Conjugative transposon, TraJ, C-terminal PGJ_RS02105 c2540a985a2d48693e7c34a63b8091f4 1469 PANTHER PTHR23304 111 814 3.3E-216 T 22-04-2016 PGJ_RS02105 c2540a985a2d48693e7c34a63b8091f4 1469 PANTHER PTHR23304 929 1369 3.3E-216 T 22-04-2016 PGJ_RS02105 c2540a985a2d48693e7c34a63b8091f4 1469 Pfam PF02514 CobN/Magnesium Chelatase 122 1360 2.6E-292 T 22-04-2016 IPR003672 CobN/magnesium chelatase GO:0009058 PGJ_RS08090 36b1ce9a769218530a959b26b9f3fa87 173 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 76 167 1.8E-30 T 22-04-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 PGJ_RS05750 085bb01e247674b5186a4af5cbefdd19 176 Pfam PF07275 Antirestriction protein (ArdA) 11 173 2.8E-28 T 22-04-2016 IPR009899 Antirestriction PGJ_RS05090 cac5df46917adb943656e96caafe3a5e 368 Pfam PF11199 Protein of unknown function (DUF2891) 27 357 4.6E-128 T 22-04-2016 IPR021365 Protein of unknown function DUF2891 PGJ_RS04525 db6fb5b8f8be0983454a3fff688566c7 75 Pfam PF15562 Immunity protein 17 16 71 2.3E-16 T 22-04-2016 IPR029087 Immunity protein 17 PGJ_RS07760 7e6549d5257c97d03d599852fa8e276c 494 Pfam PF13084 Domain of unknown function (DUF3943) 85 190 2.4E-39 T 22-04-2016 IPR025079 Domain of unknown function DUF3943 PGJ_RS08900 a872b3f44bbeccfb6eb5c98a8907c6a4 209 Pfam PF13605 Domain of unknown function (DUF4141) 4 56 1.8E-23 T 22-04-2016 IPR025415 Protein of unknown function DUF4141 PGJ_RS08730 cee34be31c1851000e95c8ce1d7de7d7 129 SUPERFAMILY SSF46955 45 100 4.94E-6 T 22-04-2016 IPR009061 Putative DNA-binding domain PGJ_RS09600 6069ae288009e1fdb4af109e10966118 183 Pfam PF02620 Uncharacterized ACR, COG1399 61 175 1.1E-18 T 22-04-2016 IPR003772 Protein of unknown function DUF177 PGJ_RS03355 dba2bded0b1ca484f58cd800a6f60c3f 117 Pfam PF05713 Bacterial mobilisation protein (MobC) 72 113 2.9E-8 T 22-04-2016 IPR008687 Bacterial mobilisation PGJ_RS05715 378e3b537fc051d96346d11adf7989c4 194 Pfam PF10626 Conjugative transposon protein TraO 26 193 9.0E-75 T 22-04-2016 IPR018899 Conjugative transposon, TraO PGJ_RS03655 ec4d7f329bfe3426c2b24d84fbed2412 407 Gene3D G3DSA:3.40.50.150 90 183 3.9E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS03655 ec4d7f329bfe3426c2b24d84fbed2412 407 SUPERFAMILY SSF53335 84 197 1.88E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PGJ_RS02785 6f8d10fff81a7c05922bf6d43beb2725 61 Pfam PF12669 Virus attachment protein p12 family 8 44 3.8E-8 T 22-04-2016 PGJ_RS07425 becfd0c86b46b074a47ccec52706aec0 140 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 11 134 1.7E-22 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC PGJ_RS01850 1cb69f3bbdfadb42feea4db6675ce9a3 341 Pfam PF01757 Acyltransferase family 11 309 1.1E-15 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 PGJ_RS01475 bfe997c6bcc9be3ce417759d81d865d4 315 Pfam PF11777 Protein of unknown function (DUF3316) 7 169 8.0E-27 T 22-04-2016 IPR016879 Uncharacterised conserved protein UCP028299 PGJ_RS07495 4068c12aea20c23c9e376734a395c3d8 73 Pfam PF11387 Protein of unknown function (DUF2795) 11 56 8.2E-18 T 22-04-2016 IPR021527 Protein of unknown function DUF2795 PGJ_RS02175 4bad0ab83527ee3749ea697af71b5e3b 75 Pfam PF11297 Protein of unknown function (DUF3098) 2 67 1.2E-30 T 22-04-2016 IPR021448 Protein of unknown function DUF3098 PGJ_RS03340 4837445552d4430eb692fe709231afa2 118 Pfam PF12728 Helix-turn-helix domain 46 92 1.5E-11 T 22-04-2016 PGJ_RS05685 f53af0f0b8f1aecbb5458a4ad1672c09 203 Pfam PF13605 Domain of unknown function (DUF4141) 1 50 9.4E-27 T 22-04-2016 IPR025415 Protein of unknown function DUF4141 PGJ_RS08980 8affbc5f024ce41802a10a644fd2078b 423 Gene3D G3DSA:2.20.25.10 46 78 9.4E-4 T 22-04-2016 PGJ_RS08980 8affbc5f024ce41802a10a644fd2078b 423 Pfam PF14284 PcfJ-like protein 255 407 1.9E-42 T 22-04-2016 IPR025586 PcfJ-like protein PGJ_RS05855 6cd59134847120131645ecaecc13df76 194 Pfam PF11307 Protein of unknown function (DUF3109) 1 181 2.9E-75 T 22-04-2016 IPR021458 Protein of unknown function DUF3109 PGJ_RS05010 8d831d845aa8d5c916e913eb95f6e624 80 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 14 79 1.4E-9 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS04245 3cf31b76ac462b77dd73523f0924e8e3 101 Pfam PF13808 DDE_Tnp_1-associated 6 98 1.3E-18 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal PGJ_RS08565 3ffddec14c19b56ab421bc7815312137 300 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 232 292 1.7E-9 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain PGJ_RS09970 925f5c509caa264a9145dfabafca3327 576 SUPERFAMILY SSF51126 175 453 4.59E-8 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor PGJ_RS06425 ee25f5967a413dad441c07a327b63ce2 415 Pfam PF13387 Domain of unknown function (DUF4105) 37 180 9.3E-24 T 22-04-2016 IPR025178 Domain of unknown function DUF4105 PGJ_RS00330 6e2cce2e4037060857710683e6d6d92b 62 Pfam PF13707 RloB-like protein 13 52 1.8E-10 T 22-04-2016 IPR025591 RloB-like protein PGJ_RS03940 1ad708b778b24a36983730faac9b5e20 520 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 382 482 7.1E-6 T 22-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain PGJ_RS05725 ef9aa865455a61bfb7ec554c8720fce2 153 Pfam PF12988 Domain of unknown function, B. Theta Gene description (DUF3872) 9 139 2.1E-63 T 22-04-2016 IPR024355 Protein of unknown function DUF3872 PGJ_RS08855 8c5d733d8996893285633d0fe0871efa 426 Pfam PF03432 Relaxase/Mobilisation nuclease domain 62 167 2.3E-15 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 PGJ_RS09650 2a35053445cf5cd34e44d6b27145bb09 223 Pfam PF13568 Outer membrane protein beta-barrel domain 21 197 9.7E-27 T 22-04-2016 IPR025665 Outer membrane protein beta-barrel domain PGJ_RS05045 1886ac55a5a704905ad805c3f841a8a5 204 Pfam PF02472 Biopolymer transport protein ExbD/TolR 4 158 2.5E-15 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PGJ_RS00680 f2ad48c796d1a65b6413daeb1184526b 179 Pfam PF04390 Lipopolysaccharide-assembly 20 173 2.2E-13 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PGJ_RS02780 d49b03759d0bcedd765b0106a24b3841 152 Pfam PF10882 Bacterial PH domain 65 140 1.4E-7 T 22-04-2016 IPR027783 Bacterial Pleckstrin homology domain-related PGJ_RS05650 53001ea5886ac6e6c38d327910464f2f 117 Pfam PF11888 Protein of unknown function (DUF3408) 22 109 1.4E-22 T 22-04-2016 IPR021823 Protein of unknown function DUF3408