CS550_RS00025	SM00838	Elongation factor G C-terminus
CS550_RS00025	SM00889	Elongation factor G, domain IV
CS550_RS00030	SM01403	CS550_RS00030
CS550_RS00050	SM01382	CS550_RS00050
CS550_RS00050	SM01383	CS550_RS00050
CS550_RS00065	SM00322	K homology RNA-binding domain
CS550_RS00085	SM01374	CS550_RS00085
CS550_RS00090	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CS550_RS00145	SM00316	Ribosomal protein S1-like RNA-binding domain
CS550_RS00165	SM00363	S4 RNA-binding domain
CS550_RS00165	SM01390	CS550_RS00165
CS550_RS00170	SM00662	RNA polymerases D
CS550_RS00225	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CS550_RS00260	SM00450	Rhodanese Homology Domain
CS550_RS00275	SM00812	Alpha-L-fucosidase
CS550_RS00295	SM00840	CS550_RS00295
CS550_RS00305	SM00563	Phosphate acyltransferases
CS550_RS00340	SM00255	Toll - interleukin 1 - resistance
CS550_RS00340	SM00364	Leucine-rich repeats, bacterial type
CS550_RS00340	SM00365	Leucine-rich repeat, SDS22-like subfamily
CS550_RS00340	SM00368	Leucine rich repeat, ribonuclease inhibitor type
CS550_RS00340	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CS550_RS00380	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CS550_RS00380	SM00245	tail specific protease
CS550_RS00390	SM00480	DNA polymerase III beta subunit
CS550_RS00395	SM00479	CS550_RS00395
CS550_RS00415	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CS550_RS00460	SM00642	Alpha-amylase domain
CS550_RS00465	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CS550_RS00465	SM00474	3'-5' exonuclease
CS550_RS00465	SM00475	5'-3' exonuclease
CS550_RS00465	SM00482	DNA polymerase A domain
CS550_RS00470	SM00028	Tetratricopeptide repeats
CS550_RS00470	SM00342	helix_turn_helix, arabinose operon control protein
CS550_RS00470	SM00387	Histidine kinase-like ATPases
CS550_RS00470	SM00388	His Kinase A (phosphoacceptor) domain
CS550_RS00470	SM00448	cheY-homologous receiver domain
CS550_RS00515	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CS550_RS00515	SM00954	Region found in RelA / SpoT proteins
CS550_RS00545	SM00400	zinc finger
CS550_RS00545	SM00493	CS550_RS00545
CS550_RS00590	SM01192	CS550_RS00590
CS550_RS00590	SM01193	CS550_RS00590
CS550_RS00615	SM00487	DEAD-like helicases superfamily
CS550_RS00615	SM00490	helicase superfamily c-terminal domain
CS550_RS00645	SM00060	Fibronectin type 3 domain
CS550_RS00720	SM00506	Appr-1"-p processing enzyme
CS550_RS00735	SM00271	DnaJ molecular chaperone homology domain
CS550_RS00745	SM00487	DEAD-like helicases superfamily
CS550_RS00745	SM00490	helicase superfamily c-terminal domain
CS550_RS00745	SM00982	CS550_RS00745
CS550_RS00745	SM01058	CarD-like/TRCF domain
CS550_RS00750	SM00014	Acid phosphatase homologues
CS550_RS00755	SM00478	endonuclease III
CS550_RS00755	SM00525	CS550_RS00755
CS550_RS00780	SM00382	ATPases associated with a variety of cellular activities
CS550_RS00800	SM00825	Beta-ketoacyl synthase
CS550_RS00805	SM00358	Double-stranded RNA binding motif
CS550_RS00805	SM00535	Ribonuclease III family
CS550_RS00820	SM00382	ATPases associated with a variety of cellular activities
CS550_RS00835	SM01387	CS550_RS00835
CS550_RS00875	SM00812	Alpha-L-fucosidase
CS550_RS00880	SM00861	Transketolase, pyrimidine binding domain
CS550_RS00895	SM00919	Malic enzyme, NAD binding domain
CS550_RS00895	SM01274	CS550_RS00895
CS550_RS00910	SM00382	ATPases associated with a variety of cellular activities
CS550_RS00985	SM01211	CS550_RS00985
CS550_RS01000	SM00028	Tetratricopeptide repeats
CS550_RS01025	SM00900	CS550_RS01025
CS550_RS01140	SM01221	CS550_RS01140
CS550_RS01140	SM01222	CS550_RS01140
CS550_RS01155	SM00357	Cold shock protein domain
CS550_RS01155	SM00382	ATPases associated with a variety of cellular activities
CS550_RS01155	SM00384	DNA binding domain with preference for A/T rich regions
CS550_RS01155	SM00959	Rho termination factor, N-terminal domain
CS550_RS01220	SM00487	DEAD-like helicases superfamily
CS550_RS01220	SM00490	helicase superfamily c-terminal domain
CS550_RS01275	SM00903	Flavin reductase like domain
CS550_RS01295	SM00062	Bacterial periplasmic substrate-binding proteins
CS550_RS01300	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CS550_RS01305	SM00474	3'-5' exonuclease
CS550_RS01315	SM00387	Histidine kinase-like ATPases
CS550_RS01315	SM00433	TopoisomeraseII
CS550_RS01350	SM00487	DEAD-like helicases superfamily
CS550_RS01350	SM00490	helicase superfamily c-terminal domain
CS550_RS01365	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CS550_RS01370	SM00463	Small MutS-related domain
CS550_RS01370	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CS550_RS01370	SM00534	ATPase domain of DNA mismatch repair MUTS family
CS550_RS01410	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CS550_RS01410	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CS550_RS01415	SM00649	Ribosomal protein L11/L12
CS550_RS01440	SM00663	RNA polymerase I subunit A N-terminus
CS550_RS01445	SM00100	Cyclic nucleotide-monophosphate binding domain
CS550_RS01445	SM00419	helix_turn_helix, cAMP Regulatory protein
CS550_RS01470	SM00322	K homology RNA-binding domain
CS550_RS01470	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CS550_RS01510	SM00853	MutL C terminal dimerisation domain
CS550_RS01510	SM01340	CS550_RS01510
CS550_RS01530	SM00341	Helicase and RNase D C-terminal
CS550_RS01530	SM00487	DEAD-like helicases superfamily
CS550_RS01530	SM00490	helicase superfamily c-terminal domain
CS550_RS01530	SM00956	CS550_RS01530
CS550_RS01535	SM00382	ATPases associated with a variety of cellular activities
CS550_RS01535	SM00994	ClpX C4-type zinc finger
CS550_RS01535	SM01086	C-terminal, D2-small domain, of ClpB protein
CS550_RS01615	SM00947	Carbonic anhydrase
CS550_RS01725	SM00028	Tetratricopeptide repeats
CS550_RS01735	SM01091	Transporter associated domain
CS550_RS01805	SM00342	helix_turn_helix, arabinose operon control protein
CS550_RS01865	SM00530	Helix-turn-helix XRE-family like proteins 
CS550_RS01890	SM00788	Adenylosuccinate synthetase
CS550_RS01935	SM00729	Elongator protein 3, MiaB family, Radical SAM
CS550_RS01980	SM01323	CS550_RS01980
CS550_RS01995	SM00382	ATPases associated with a variety of cellular activities
CS550_RS02070	SM00729	Elongator protein 3, MiaB family, Radical SAM
CS550_RS02105	SM00072	Guanylate kinase homologues.
CS550_RS02115	SM00957	SecA DEAD-like domain
CS550_RS02115	SM00958	SecA preprotein cross-linking domain
CS550_RS02150	SM00883	Chaperonin 10 Kd subunit
CS550_RS02160	SM01240	CS550_RS02160
CS550_RS02185	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CS550_RS02190	SM00851	MGS-like domain
CS550_RS02190	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CS550_RS02235	SM00935	Outer membrane protein (OmpH-like)
CS550_RS02300	SM00890	Domain of unknown function
CS550_RS02365	SM00841	Elongation factor P, C-terminal
CS550_RS02365	SM01185	CS550_RS02365
CS550_RS02375	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CS550_RS02390	SM00740	CS550_RS02390
CS550_RS02430	SM00842	Cell division protein FtsA
CS550_RS02435	SM00864	Tubulin/FtsZ family, GTPase domain
CS550_RS02435	SM00865	Tubulin/FtsZ family, C-terminal domain
CS550_RS02470	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CS550_RS02575	SM00382	ATPases associated with a variety of cellular activities
CS550_RS02575	SM00464	Found in ATP-dependent protease La (LON)
CS550_RS02615	SM00360	RNA recognition motif
CS550_RS02620	SM00382	ATPases associated with a variety of cellular activities
CS550_RS02690	SM00382	ATPases associated with a variety of cellular activities
CS550_RS02725	SM00886	Stress responsive A/B Barrel Domain
CS550_RS02780	SM01038	Beta galactosidase small chain
CS550_RS02810	SM00382	ATPases associated with a variety of cellular activities
CS550_RS02870	SM00382	ATPases associated with a variety of cellular activities
CS550_RS02955	SM00855	Phosphoglycerate mutase family
CS550_RS03025	SM00387	Histidine kinase-like ATPases
CS550_RS03025	SM00388	His Kinase A (phosphoacceptor) domain
CS550_RS03030	SM00448	cheY-homologous receiver domain
CS550_RS03030	SM00862	Transcriptional regulatory protein, C terminal
CS550_RS03070	SM00363	S4 RNA-binding domain
CS550_RS03075	SM00740	CS550_RS03075
CS550_RS03135	SM00387	Histidine kinase-like ATPases
CS550_RS03140	SM00382	ATPases associated with a variety of cellular activities
CS550_RS03140	SM00448	cheY-homologous receiver domain
CS550_RS03180	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CS550_RS03180	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CS550_RS03180	SM00493	CS550_RS03180
CS550_RS03215	SM00028	Tetratricopeptide repeats
CS550_RS03225	SM00316	Ribosomal protein S1-like RNA-binding domain
CS550_RS03225	SM00322	K homology RNA-binding domain
CS550_RS03230	SM01065	Starch binding domain
CS550_RS03260	SM00893	Electron transfer flavoprotein domain
CS550_RS03265	SM00893	Electron transfer flavoprotein domain
CS550_RS03325	SM00873	B3/4 domain
CS550_RS03400	SM00849	Metallo-beta-lactamase superfamily
CS550_RS03425	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CS550_RS03455	SM00530	Helix-turn-helix XRE-family like proteins 
CS550_RS03515	SM00342	helix_turn_helix, arabinose operon control protein
CS550_RS03685	SM00382	ATPases associated with a variety of cellular activities
CS550_RS03705	SM00830	Chorismate mutase type II
CS550_RS03720	SM00098	Alkaline phosphatase homologues
CS550_RS03735	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CS550_RS03735	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CS550_RS03735	SM00493	CS550_RS03735
CS550_RS03760	SM00382	ATPases associated with a variety of cellular activities
CS550_RS03925	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CS550_RS04035	SM01038	Beta galactosidase small chain
CS550_RS04040	SM00642	Alpha-amylase domain
CS550_RS04085	SM00986	Uracil DNA glycosylase superfamily
CS550_RS04085	SM00987	UreE urease accessory protein, C-terminal domain 
CS550_RS04175	SM00448	cheY-homologous receiver domain
CS550_RS04200	SM00838	Elongation factor G C-terminus
CS550_RS04200	SM00889	Elongation factor G, domain IV
CS550_RS04205	SM00729	Elongator protein 3, MiaB family, Radical SAM
CS550_RS04225	SM00831	Cation transporter/ATPase, N-terminus
CS550_RS04250	SM00382	ATPases associated with a variety of cellular activities
CS550_RS04275	SM01001	AIR carboxylase
CS550_RS04290	SM00028	Tetratricopeptide repeats
CS550_RS04305	SM00904	Riboflavin kinase
CS550_RS04335	SM00946	Prolyl-tRNA synthetase, C-terminal
CS550_RS04470	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CS550_RS04530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CS550_RS04545	SM00382	ATPases associated with a variety of cellular activities
CS550_RS04555	SM00729	Elongator protein 3, MiaB family, Radical SAM
CS550_RS04565	SM00028	Tetratricopeptide repeats
CS550_RS04565	SM00386	HAT (Half-A-TPR) repeats
CS550_RS04610	SM00382	ATPases associated with a variety of cellular activities
CS550_RS04615	SM00382	ATPases associated with a variety of cellular activities
CS550_RS04645	SM00028	Tetratricopeptide repeats
CS550_RS04660	SM00382	ATPases associated with a variety of cellular activities
CS550_RS04710	SM00529	Helix-turn-helix diphteria tox regulatory element
CS550_RS04710	SM00899	CS550_RS04710
CS550_RS04725	SM00646	CS550_RS04725
CS550_RS04745	SM00422	helix_turn_helix, mercury resistance
CS550_RS04750	SM00419	helix_turn_helix, cAMP Regulatory protein
CS550_RS04760	SM00230	Calpain-like thiol protease family.
CS550_RS04865	SM00363	S4 RNA-binding domain
CS550_RS04900	SM00028	Tetratricopeptide repeats
CS550_RS04915	SM00984	UDP binding domain
CS550_RS04990	SM00028	Tetratricopeptide repeats
CS550_RS05005	SM00344	helix_turn_helix ASNC type
CS550_RS05030	SM00363	S4 RNA-binding domain
CS550_RS05045	SM00382	ATPases associated with a variety of cellular activities
CS550_RS05045	SM01086	C-terminal, D2-small domain, of ClpB protein
CS550_RS05060	SM00382	ATPases associated with a variety of cellular activities
CS550_RS05060	SM00962	SRP54-type protein, GTPase domain
CS550_RS05060	SM00963	SRP54-type protein, helical bundle domain
CS550_RS05085	SM00382	ATPases associated with a variety of cellular activities
CS550_RS05125	SM01005	Alanine racemase, C-terminal domain
CS550_RS05165	SM00448	cheY-homologous receiver domain
CS550_RS05165	SM00862	Transcriptional regulatory protein, C terminal
CS550_RS05175	SM00729	Elongator protein 3, MiaB family, Radical SAM
CS550_RS05215	SM00893	Electron transfer flavoprotein domain
CS550_RS05220	SM00893	Electron transfer flavoprotein domain
CS550_RS05230	SM00882	Coenzyme A transferase
CS550_RS05245	SM00534	ATPase domain of DNA mismatch repair MUTS family
CS550_RS05275	SM00882	Coenzyme A transferase
CS550_RS05290	SM00530	Helix-turn-helix XRE-family like proteins 
CS550_RS05305	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CS550_RS05305	SM00245	tail specific protease
CS550_RS05315	SM00382	ATPases associated with a variety of cellular activities
CS550_RS05320	SM00382	ATPases associated with a variety of cellular activities
CS550_RS05445	SM00028	Tetratricopeptide repeats
CS550_RS05465	SM01409	CS550_RS05465
CS550_RS05500	SM00062	Bacterial periplasmic substrate-binding proteins
CS550_RS05505	SM00382	ATPases associated with a variety of cellular activities
CS550_RS05525	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CS550_RS05540	SM00421	helix_turn_helix, Lux Regulon
CS550_RS05550	SM00822	CS550_RS05550
CS550_RS05585	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CS550_RS05605	SM00563	Phosphate acyltransferases
CS550_RS05625	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CS550_RS05625	SM00292	breast cancer carboxy-terminal domain
CS550_RS05625	SM00532	Ligase N family
CS550_RS05635	SM00493	CS550_RS05635
CS550_RS05640	SM00316	Ribosomal protein S1-like RNA-binding domain
CS550_RS05645	SM00411	bacterial (prokaryotic) histone like domain
CS550_RS05725	SM00841	Elongation factor P, C-terminal
CS550_RS05725	SM01185	CS550_RS05725
CS550_RS05740	SM00984	UDP binding domain
CS550_RS05765	SM01118	CS550_RS05765
CS550_RS05800	SM00155	Phospholipase D. Active site motifs.
CS550_RS05860	SM00487	DEAD-like helicases superfamily
CS550_RS05860	SM00490	helicase superfamily c-terminal domain
CS550_RS06000	SM00382	ATPases associated with a variety of cellular activities
CS550_RS06030	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CS550_RS06030	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CS550_RS06030	SM00493	CS550_RS06030
CS550_RS06080	SM00899	CS550_RS06080
CS550_RS06100	SM00316	Ribosomal protein S1-like RNA-binding domain
CS550_RS06135	SM00849	Metallo-beta-lactamase superfamily
CS550_RS06160	SM00854	Bacterial capsule synthesis protein PGA_cap
CS550_RS06230	SM00670	Large family of predicted nucleotide-binding domains
CS550_RS06255	SM00881	CoA binding domain
CS550_RS06275	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CS550_RS06275	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CS550_RS06295	SM00244	prohibitin homologues
CS550_RS06335	SM00849	Metallo-beta-lactamase superfamily
CS550_RS06360	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CS550_RS06385	SM00563	Phosphate acyltransferases
CS550_RS06415	SM01209	CS550_RS06415
CS550_RS06415	SM01210	CS550_RS06415
CS550_RS06425	SM00981	CS550_RS06425
CS550_RS06495	SM00478	endonuclease III
CS550_RS06505	SM00382	ATPases associated with a variety of cellular activities
CS550_RS06540	SM00487	DEAD-like helicases superfamily
CS550_RS06540	SM00490	helicase superfamily c-terminal domain
CS550_RS06545	SM00530	Helix-turn-helix XRE-family like proteins 
CS550_RS06550	SM00028	Tetratricopeptide repeats
CS550_RS06555	SM00434	DNA Topoisomerase IV
CS550_RS06610	SM00798	AICARFT/IMPCHase bienzyme
CS550_RS06610	SM00851	MGS-like domain
CS550_RS06710	SM00382	ATPases associated with a variety of cellular activities
CS550_RS06750	SM00028	Tetratricopeptide repeats
CS550_RS06755	SM00421	helix_turn_helix, Lux Regulon
CS550_RS06755	SM00448	cheY-homologous receiver domain
CS550_RS06760	SM00028	Tetratricopeptide repeats
CS550_RS06760	SM00387	Histidine kinase-like ATPases
CS550_RS06790	SM00756	CS550_RS06790
CS550_RS06970	SM00450	Rhodanese Homology Domain
CS550_RS06975	SM00450	Rhodanese Homology Domain
CS550_RS06975	SM00849	Metallo-beta-lactamase superfamily
CS550_RS06985	SM00100	Cyclic nucleotide-monophosphate binding domain
CS550_RS06985	SM00419	helix_turn_helix, cAMP Regulatory protein
CS550_RS07020	SM00327	von Willebrand factor (vWF) type A domain
CS550_RS07025	SM00327	von Willebrand factor (vWF) type A domain
CS550_RS07030	SM00028	Tetratricopeptide repeats
CS550_RS07040	SM00028	Tetratricopeptide repeats
CS550_RS07045	SM00014	Acid phosphatase homologues
CS550_RS07070	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CS550_RS07220	SM00226	Low molecular weight phosphatase family
CS550_RS07235	SM00843	CS550_RS07235
CS550_RS07300	SM00900	CS550_RS07300
CS550_RS07305	SM00434	DNA Topoisomerase IV
CS550_RS07315	SM00245	tail specific protease
CS550_RS07350	SM00155	Phospholipase D. Active site motifs.
CS550_RS07355	SM00954	Region found in RelA / SpoT proteins
CS550_RS07360	SM00028	Tetratricopeptide repeats
CS550_RS07435	SM00382	ATPases associated with a variety of cellular activities
CS550_RS07530	SM00382	ATPases associated with a variety of cellular activities
CS550_RS07585	SM00382	ATPases associated with a variety of cellular activities
CS550_RS07610	SM00487	DEAD-like helicases superfamily
CS550_RS07625	SM00387	Histidine kinase-like ATPases
CS550_RS07625	SM00433	TopoisomeraseII
CS550_RS07675	SM00450	Rhodanese Homology Domain
CS550_RS07700	SM00382	ATPases associated with a variety of cellular activities
CS550_RS07710	SM00316	Ribosomal protein S1-like RNA-binding domain
CS550_RS07710	SM00955	CS550_RS07710
CS550_RS07745	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CS550_RS07820	SM00382	ATPases associated with a variety of cellular activities
CS550_RS07845	SM01091	Transporter associated domain
CS550_RS07870	SM00836	DALR anticodon binding domain
CS550_RS07870	SM01016	Arginyl tRNA synthetase N terminal dom
CS550_RS07910	SM00382	ATPases associated with a variety of cellular activities
CS550_RS07990	SM00986	Uracil DNA glycosylase superfamily
CS550_RS07990	SM00987	UreE urease accessory protein, C-terminal domain 
CS550_RS08000	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CS550_RS08000	SM00245	tail specific protease
CS550_RS08020	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CS550_RS08020	SM00631	CS550_RS08020
CS550_RS08045	SM00382	ATPases associated with a variety of cellular activities
CS550_RS08050	SM00460	Transglutaminase/protease-like homologues
CS550_RS08060	SM00479	CS550_RS08060
CS550_RS08165	SM01234	CS550_RS08165
CS550_RS08190	SM00935	Outer membrane protein (OmpH-like)
CS550_RS08195	SM00935	Outer membrane protein (OmpH-like)
CS550_RS08265	SM00450	Rhodanese Homology Domain
CS550_RS08270	SM00347	helix_turn_helix multiple antibiotic resistance protein
CS550_RS08275	SM00479	CS550_RS08275
CS550_RS08305	SM00363	S4 RNA-binding domain
CS550_RS08365	SM00382	ATPases associated with a variety of cellular activities
CS550_RS08365	SM00962	SRP54-type protein, GTPase domain
CS550_RS08365	SM00963	SRP54-type protein, helical bundle domain
CS550_RS08370	SM00729	Elongator protein 3, MiaB family, Radical SAM
CS550_RS08380	SM00382	ATPases associated with a variety of cellular activities
CS550_RS08415	SM00470	ParB-like nuclease domain
CS550_RS08425	SM00257	Lysin motif
CS550_RS08430	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CS550_RS08445	SM00650	Ribosomal RNA adenine dimethylases
CS550_RS08450	SM00116	Domain in cystathionine beta-synthase and other proteins.
CS550_RS08450	SM00924	MgtE intracellular N domain
CS550_RS08470	SM00855	Phosphoglycerate mutase family
CS550_RS08510	SM00411	bacterial (prokaryotic) histone like domain
CS550_RS08585	SM00984	UDP binding domain
CS550_RS08600	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CS550_RS08600	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CS550_RS08600	SM00493	CS550_RS08600
CS550_RS08660	SM00729	Elongator protein 3, MiaB family, Radical SAM
CS550_RS08660	SM00876	Biotin and Thiamin Synthesis associated domain
CS550_RS08710	SM00905	Dihydroneopterin aldolase
CS550_RS08740	SM01400	CS550_RS08740
CS550_RS08745	SM00487	DEAD-like helicases superfamily
CS550_RS08745	SM00490	helicase superfamily c-terminal domain
CS550_RS08790	SM00876	Biotin and Thiamin Synthesis associated domain
CS550_RS08855	SM00849	Metallo-beta-lactamase superfamily
CS550_RS08860	SM00870	CS550_RS08860
CS550_RS08875	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CS550_RS08880	SM00342	helix_turn_helix, arabinose operon control protein
CS550_RS08995	SM00257	Lysin motif
CS550_RS09055	SM00342	helix_turn_helix, arabinose operon control protein
CS550_RS09155	SM00900	CS550_RS09155
CS550_RS09200	SM00382	ATPases associated with a variety of cellular activities
CS550_RS09210	SM00257	Lysin motif
CS550_RS09220	SM00382	ATPases associated with a variety of cellular activities
CS550_RS09230	SM00387	Histidine kinase-like ATPases
CS550_RS09240	SM00758	CS550_RS09240
CS550_RS09260	SM00481	DNA polymerase alpha chain like domain
CS550_RS09325	SM00881	CoA binding domain
CS550_RS09350	SM00387	Histidine kinase-like ATPases
CS550_RS09355	SM00382	ATPases associated with a variety of cellular activities
CS550_RS09355	SM00448	cheY-homologous receiver domain
CS550_RS09375	SM00382	ATPases associated with a variety of cellular activities
CS550_RS09375	SM01086	C-terminal, D2-small domain, of ClpB protein
CS550_RS09420	SM00382	ATPases associated with a variety of cellular activities
CS550_RS09420	SM00760	Bacterial dnaA protein helix-turn-helix domain
CS550_RS09460	SM00729	Elongator protein 3, MiaB family, Radical SAM
CS550_RS09485	SM00861	Transketolase, pyrimidine binding domain
CS550_RS09550	SM00382	ATPases associated with a variety of cellular activities
CS550_RS09560	SM01360	CS550_RS09560
CS550_RS09570	SM00732	Likely ribonuclease with RNase H fold.
CS550_RS09580	SM00028	Tetratricopeptide repeats
CS550_RS09585	SM00382	ATPases associated with a variety of cellular activities
CS550_RS09720	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CS550_RS09720	SM00534	ATPase domain of DNA mismatch repair MUTS family
CS550_RS09765	SM00487	DEAD-like helicases superfamily
CS550_RS09765	SM00490	helicase superfamily c-terminal domain
CS550_RS09815	SM00047	Lysozyme subfamily 2
CS550_RS09815	SM00257	Lysin motif
CS550_RS09825	SM00937	CS550_RS09825
CS550_RS09830	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CS550_RS09875	SM00028	Tetratricopeptide repeats
CS550_RS09875	SM00382	ATPases associated with a variety of cellular activities
CS550_RS09920	SM00387	Histidine kinase-like ATPases
CS550_RS09955	SM01130	CS550_RS09955
CS550_RS09980	SM00977	TilS substrate C-terminal domain
CS550_RS10060	SM00855	Phosphoglycerate mutase family
CS550_RS10105	SM00490	helicase superfamily c-terminal domain
CS550_RS10180	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CS550_RS10210	SM01133	CS550_RS10210
CS550_RS10225	SM00465	GIY-YIG type nucleases (URI domain)
CS550_RS10230	SM01228	CS550_RS10230
CS550_RS10315	SM00028	Tetratricopeptide repeats
CS550_RS10420	SM00028	Tetratricopeptide repeats
