locus strain_id interpro function go others CUB95_RS00010 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|SSF56801 CUB95_RS00015 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704 CUB95_RS00020 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000119|IPR005902|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|PF00216|SSF47729|TIGR01201 CUB95_RS00030 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|SSF52058 CUB95_RS00035 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027848 Protein of unknown function DUF4494 PF14902 CUB95_RS00040 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Pyridoxal phosphate homeostasis protein G3DSA:3.20.20.10|PF01168|PIRSF004848|PS01211|SSF51419|TIGR00044 CUB95_RS00045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023753|IPR028348 FAD dependent protein|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PIRSF038984|PR00411|SSF51905 CUB95_RS00050 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005019|IPR011257 DNA glycosylase|Methyladenine glycosylase GO:0003824|GO:0006281|GO:0006284|GO:0008725 G3DSA:1.10.340.30|PF03352|SSF48150 CUB95_RS00065 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS00070 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011146 HIT-like domain GO:0003824 G3DSA:3.30.428.10|PF16269|SSF54197 CUB95_RS00075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013486|IPR013693 Sporulation stage II protein D, amidase enhancer LytB|Sporulation stage II protein D, amidase enhancer LytB N-terminal GO:0030435 PF08486|TIGR02669 CUB95_RS00080 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 CUB95_RS00085 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028357 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 CUB95_RS00100 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001584|IPR009057|IPR011991|IPR012337|IPR025246 Homeobox domain-like|Integrase, catalytic core|Ribonuclease H-like domain|Transposase IS30-like HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PF13936|SSF46689|SSF53098 CUB95_RS00105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002205|IPR005743|IPR006691|IPR013757|IPR013758|IPR013760|IPR024946|IPR035516 Arginine repressor C-terminal-like domain|DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal|DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain|Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:1.10.268.10|G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|SM00434|SSF101904|SSF56719|TIGR01063 CUB95_RS00110 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|SM00028|SSF48452 CUB95_RS00115 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:1.25.40.120|SM00028|SSF48452 CUB95_RS00120 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 CUB95_RS00125 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001650|IPR005580|IPR011545|IPR014001|IPR027417 DEAD box helicase DbpA/CsdA, RNA-binding domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF03880|SM00487|SM00490|SSF52540 CUB95_RS00130 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR022278 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Phosphoserine aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0004648|GO:0006564 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00160|PF00266|PIRSF000525|PS00595|SSF53383 CUB95_RS00135 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006139|IPR006140|IPR016040|IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|SSF51735|SSF52283 CUB95_RS00140 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008323 Uncharacterised conserved protein UCP033563 PF06245|PIRSF033563 CUB95_RS00145 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001498|IPR020568 Impact, N-terminal|Ribosomal protein S5 domain 2-type fold G3DSA:3.30.230.30|G3DSA:3.30.70.240|PF01205|SSF54211 CUB95_RS00155 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF02878|PF02879|PF02880|PR00509|SSF53738 CUB95_RS00160 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 CUB95_RS00165 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 CUB95_RS00170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011048|IPR015943 Cytochrome cd1-nitrite reductase-like, haem d1 domain|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF51004 CUB95_RS00185 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 CUB95_RS00190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001267|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Thymidine kinase GO:0004797|GO:0005524 G3DSA:3.30.60.20|G3DSA:3.40.50.300|MF_00124|PF00265|PIRSF035805|SSF52540|SSF57716 CUB95_RS00195 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001250|IPR011051|IPR014628|IPR014710 Mannose-6-phosphate isomerase, Firmicutes type, short form|Mannose-6-phosphate isomerase, type I|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0004476|GO:0005975|GO:0008270 G3DSA:2.60.120.10|PF01238|PIRSF036894|SSF51182 CUB95_RS00200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000629|IPR001650|IPR005580|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD box helicase DbpA/CsdA, RNA-binding domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF03880|PS00039|SM00487|SM00490|SSF52540 CUB95_RS00205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003961|IPR008979|IPR011628|IPR011635|IPR013783 CARDB domain|Cleaved adhesin|Fibronectin type III|Galactose-binding domain-like|Immunoglobulin-like fold GO:0005515 G3DSA:2.60.120.260|G3DSA:2.60.40.10|PF07675|PF07705|SSF49265|SSF82171 CUB95_RS00210 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013823|IPR014719 Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GO:0003735|GO:0006412 G3DSA:2.20.120.10|G3DSA:3.30.1390.10|PD001326|PF00542|SSF54736 CUB95_RS00215 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.60.40.1120|PF07715|PF13715|SSF49464|SSF56935 CUB95_RS00230 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001322|IPR032627 Lamin Tail Domain|Protein of unknown function DUF4876 G3DSA:2.60.40.1260|PF16215 CUB95_RS00235 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001431|IPR007863|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|SSF63411 CUB95_RS00240 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF13177|SSF52540 CUB95_RS00245 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007557 PSP1, C-terminal PF04468 CUB95_RS00250 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR020018 Gliding motility-associated lipoprotein, GldH PF14109 CUB95_RS00255 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR009042|IPR011991|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF00140|PF04539|PF04542|PF04545|PIRSF000770|PR00046|SSF88659|SSF88946|TIGR02937 CUB95_RS00265 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.50.300|SSF53795 CUB95_RS00270 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015927 Peptidase S24/S26A/S26B/S26C G3DSA:2.10.109.10|SSF51306 CUB95_RS00275 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008792 Coenzyme PQQ synthesis D PF05402 CUB95_RS00285 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706 CUB95_RS00290 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005255 PdxA family GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF04166|SSF53659 CUB95_RS00295 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032286 Protein of unknown function DUF4837 PF16125 CUB95_RS00300 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004383|IPR007197|IPR013785|IPR027492 Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475 G3DSA:3.20.20.70|MF_01849|PF04055|PF13394|PIRSF006004|SSF102114|TIGR00048 CUB95_RS00310 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007213|IPR016874|IPR029063 Methyltransferase Ppm1/Ppm2/Tcmp|S-adenosyl-L-methionine-dependent methyltransferase|Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0008168|GO:0017000|GO:0032259|GO:1901106 G3DSA:3.40.50.150|PF04072|PIRSF028177|SSF53335 CUB95_RS00315 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005886|IPR016040 NAD(P)-binding domain|UDP-glucose 4-epimerase GO:0003978|GO:0006012 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|SSF51735|TIGR01179 CUB95_RS00325 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783|IPR031345 Immunoglobulin-like fold|Protein of unknown function DUF5103 G3DSA:2.60.40.10|PF17116 CUB95_RS00330 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004843|IPR006146|IPR006179|IPR008334|IPR029052 5'-Nucleotidase, C-terminal|5'-Nucleotidase, conserved site|5'-Nucleotidase/apyrase|Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like GO:0000166|GO:0009166|GO:0016787|GO:0016788|GO:0046872 G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF00149|PF02872|PR01607|PS00785|SSF55816|SSF56300 CUB95_RS00335 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000086|IPR015376|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 G3DSA:3.90.79.10|PF00293|PF09297|PR00502|PS00893|SSF55811 CUB95_RS00340 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006043|IPR026033 Purine permease PbuG-like|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860|PIRSF005353 CUB95_RS00350 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 PF00939|TIGR00785 CUB95_RS00355 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|SSF53807 CUB95_RS00360 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000522|IPR029022|IPR035568 ABC transporter, BtuC-like|ABC transporter, FecCD-like|ABC transporter, FecCD/TroCD-like GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|SSF81345 CUB95_RS00365 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006042|IPR006043 Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860|PS01116|TIGR00801 CUB95_RS00375 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR020941 Suppressor of fused-like domain PF05076 CUB95_RS00380 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS00385 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR005517|IPR009000|IPR014721|IPR020568|IPR027417|IPR035647 EF-G domain III/V-like|Elongation factor EFG, domain V-like|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231 CUB95_RS00390 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004559|IPR006638|IPR007197|IPR013785 Aldolase-type TIM barrel|Coproporphyrinogen III oxidase, oxygen-independent related|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.20.20.70|PF04055|SM00729|SSF102114|TIGR00539 CUB95_RS00415 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF13620|PF14905|SSF49464|SSF56935 CUB95_RS00430 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010652|IPR016983 Protein of unknown function DUF1232|Uncharacterised conserved protein UCP031804 PF06803|PIRSF031804 CUB95_RS00435 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic PF12669 CUB95_RS00445 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.10.50.40|SSF54534 CUB95_RS00450 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000453|IPR020541 Chorismate synthase|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|PS00789|SSF103263|TIGR00033 CUB95_RS00455 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001295|IPR005720|IPR012135|IPR013785|IPR024920 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1|Dihydroorotate dehydrogenase, class 1/ 2|Dihydroorotate dehydrogenase, conserved site GO:0003824|GO:0004152|GO:0005737|GO:0006207|GO:0006221|GO:0006222|GO:0016627|GO:0055114 G3DSA:3.20.20.70|MF_00224|PF01180|PIRSF000164|PS00911|PS00912|SSF51395|TIGR01037 CUB95_RS00460 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001433|IPR012165|IPR017938|IPR019480 Cytochrome-c3 hydrogenase, gamma subunit|Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0006221|GO:0016491|GO:0050660|GO:0051537|GO:0055114 G3DSA:2.10.240.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF10418|PIRSF006816|SSF52343|SSF63380 CUB95_RS00465 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 CUB95_RS00470 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005790|IPR010372|IPR027417 DNA polymerase III delta, N-terminal|DNA polymerase III, delta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF06144|SSF52540|TIGR01128 CUB95_RS00475 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR029464 Type I restriction enzyme R protein, N-terminal domain PF13588 CUB95_RS00480 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003743 C4-type zinc ribbon domain G3DSA:1.10.287.620|PF02591 CUB95_RS00485 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002678 GTP cyclohydrolase 1 type 2/Nif3 G3DSA:3.40.1390.30|PF01784|SSF102705|TIGR00486 CUB95_RS00490 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001261|IPR002933|IPR010161|IPR011650 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006508|GO:0006518|GO:0008152|GO:0008237|GO:0008270|GO:0016787|GO:0045148 G3DSA:3.40.630.10|MF_00550|PF01546|PF07687|PIRSF037215|PS00758|PS00759|SSF53187|SSF55031|TIGR01882 CUB95_RS00495 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006037|IPR006153 Cation/H+ exchanger|Regulator of K+ conductance, C-terminal GO:0006812|GO:0006813|GO:0008324|GO:0015299|GO:0016021|GO:0055085 G3DSA:1.20.91.10|G3DSA:3.30.70.1450|PF00999|PF02080|SSF116726 CUB95_RS00500 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004481|IPR004837 Sodium/calcium exchanger membrane region|Sodium/potassium/calcium exchanger GO:0016021|GO:0055085 PF01699|TIGR00367 CUB95_RS00505 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.60.450.10 CUB95_RS00510 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006674|IPR006675 HD domain|HDIG domain G3DSA:1.10.3210.10|PF01966|SSF109604|TIGR00277 CUB95_RS00520 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000891|IPR003379|IPR011053|IPR013785 Aldolase-type TIM barrel|Carboxylase, conserved domain|Pyruvate carboxyltransferase|Single hybrid motif GO:0003824 G3DSA:2.40.50.100|G3DSA:3.20.20.70|PF00682|PF02436|SSF51230|SSF51569|SSF89000 CUB95_RS00525 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006037|IPR006512 Regulator of K+ conductance, C-terminal|YidE/YbjL duplication GO:0006813|GO:0008324 G3DSA:3.30.70.1450|PF02080|PF06826|SSF116726|TIGR01625 CUB95_RS00530 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.20.5.110 CUB95_RS00535 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001623|IPR007791|IPR029024 Co-chaperone DjlA, N-terminal|DnaJ domain|TerB-like G3DSA:1.10.287.110|G3DSA:1.10.3680.10|PF00226|PF05099|PR00625|SM00271|SSF158682|SSF46565 CUB95_RS00540 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000866|IPR012336|IPR017937 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin, conserved site|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0045454|GO:0055114 G3DSA:3.40.30.10|PF00578|PS00194|SSF52833 CUB95_RS00545 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003744 Queuosine precursor transporter PF02592|TIGR00697 CUB95_RS00550 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016856|IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF|NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0033739|GO:0046857|GO:0055114 G3DSA:3.30.1130.10|MF_00818|PF14489|PIRSF027377|SSF55620|TIGR03139 CUB95_RS00555 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 CUB95_RS00565 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001977|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004140|GO:0005524|GO:0015937 G3DSA:3.40.50.300|MF_00376|PF01121|SSF52540|TIGR00152 CUB95_RS00570 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012505 YbbR-like PF07949 CUB95_RS00575 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003849 Preprotein translocase YajC PF02699|PR01853|SM01323|TIGR00739 CUB95_RS00580 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006027|IPR011605 NusB antitermination factor|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|PF01029|SSF48013|TIGR01951 CUB95_RS00585 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001021|IPR011035|IPR020056|IPR020057|IPR029751 Ribosomal protein L25|Ribosomal protein L25, beta domain|Ribosomal protein L25, long-form|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain GO:0003735|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.170.120.20|G3DSA:2.40.240.10|MF_01334|PD012503|PF01386|PF14693|SSF50715|TIGR00731 CUB95_RS00590 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001328|IPR018171 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01195|SSF53178|TIGR00447 CUB95_RS00595 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002942|IPR025708 Heat shock protein 15|RNA-binding S4 domain GO:0003677|GO:0003723|GO:0003727|GO:0034605|GO:0043023 G3DSA:3.10.290.10|PF01479|PIRSF016821|SM00363|SSF55174 CUB95_RS00600 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002376|IPR004607 Formyl transferase, N-terminal|Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189|GO:0009058|GO:0016742 G3DSA:3.40.50.170|MF_01930|PF00551|SSF53328|TIGR00639 CUB95_RS00605 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009589 Sublancin immunity protein SunI GO:0030153 PF06713 CUB95_RS00610 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000667|IPR012338 Beta-lactamase/transpeptidase-like|Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 G3DSA:3.40.710.10|PF02113|PR00922|SSF56601|TIGR00666 CUB95_RS00615 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006685|IPR010920 LSM domain|Mechanosensitive ion channel MscS GO:0016020|GO:0055085 G3DSA:2.30.30.60|PF00924|SSF50182 CUB95_RS00620 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027931 Domain of unknown function DUF4595 with porin-like fold PF15283 CUB95_RS00625 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027931 Domain of unknown function DUF4595 with porin-like fold G3DSA:3.10.450.150|PF15283 CUB95_RS00630 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024311 Lipocalin-like domain PF12702 CUB95_RS00635 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027931 Domain of unknown function DUF4595 with porin-like fold PF15283 CUB95_RS00640 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR020964 Acyl-CoA dehydrogenase, C-terminal|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.120.470|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF12186|SSF158494|SSF47203|SSF56645 CUB95_RS00645 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001308|IPR014729|IPR014730|IPR014731|IPR029035 DHS-like NAD/FAD-binding domain|Electron transfer flavoprotein alpha subunit/FixB|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|PIRSF000089|SM00893|SSF52402|SSF52467 CUB95_RS00650 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000049|IPR012255|IPR014729|IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Electron transfer flavoprotein, beta-subunit, conserved site|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055 G3DSA:3.40.50.620|PF01012|PIRSF000090|PS01065|SM00893|SSF52402 CUB95_RS00655 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023198|IPR023214 HAD-like domain|Phosphoglycolate phosphatase, domain 2 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784 CUB95_RS00660 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001672|IPR018189 Phosphoglucose isomerase (PGI)|Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 G3DSA:3.40.50.10490|MF_00473|PF00342|PR00662|PS00765|SSF53697 CUB95_RS00665 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF01210|PF07479|PIRSF000114|PR00077|PS00957|SSF48179|SSF51735 CUB95_RS00670 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002313|IPR004364|IPR004365|IPR012340|IPR018149|IPR025567 Aminoacyl-tRNA synthetase, class II (D/K/N)|Domain of unknown function DUF4332|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PF14229|PR00982|SSF50249|SSF55681|TIGR00499 CUB95_RS00680 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008757|IPR024079 Metallopeptidase, catalytic domain|Peptidase M6-like, domain GO:0006508|GO:0008233|GO:0008237 G3DSA:3.40.390.10|PF05547|SSF55486|TIGR03296 CUB95_RS00685 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 CUB95_RS00690 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004561|IPR005801|IPR015890 ADC synthase|Chorismate-utilising enzyme, C-terminal|Isochorismate synthase GO:0008909|GO:0009058 G3DSA:3.60.120.10|PF00425|SSF56322|TIGR00543 CUB95_RS00695 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004433|IPR011766|IPR012001|IPR029035|IPR029061 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase|DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0003824|GO:0009234|GO:0030976|GO:0070204 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|MF_01659|PF02775|PF02776|PIRSF004983|SSF52467|SSF52518|TIGR00173 CUB95_RS00700 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001753|IPR010198|IPR014748|IPR018376|IPR029045 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB|ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152|GO:0008935|GO:0009234 G3DSA:1.10.12.10|G3DSA:3.90.226.10|MF_01934|PF00378|PS00166|SSF52096|TIGR01929 CUB95_RS00705 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013342|IPR018110|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF13378|PS00909|SM00922|SSF51604|SSF54826 CUB95_RS00710 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|SSF56801 CUB95_RS00715 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016037|IPR030960|IPR030963 3-dehydroquinate synthase AroB|3-dehydroquinate synthase domain|3-dehydroquinate synthase family GO:0003856|GO:0005737|GO:0009073|GO:0016838 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|MF_00110|PF01761|PIRSF001455|SSF56796|TIGR01357 CUB95_RS00720 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007298 Copper resistance lipoprotein NlpE PF04170 CUB95_RS00730 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002695|IPR016193|IPR024051 AICAR transformylase domain|AICARFT/IMPCHase bienzyme|Cytidine deaminase-like GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:1.10.287.440|G3DSA:3.40.140.20|PF01808|SM00798|SSF53927 CUB95_RS00740 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10 CUB95_RS00755 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 CUB95_RS00775 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015927 Peptidase S24/S26A/S26B/S26C G3DSA:1.10.260.40|G3DSA:2.10.109.10|SSF51306 CUB95_RS00795 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|SSF53098 CUB95_RS00800 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003593|IPR010982|IPR027417 AAA+ ATPase domain|Lambda repressor-like, DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677 G3DSA:3.30.240.10|G3DSA:3.40.50.300|PF13401|SM00382|SSF47413|SSF52540 CUB95_RS00805 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003593|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SM00382|SSF52540 CUB95_RS00820 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 G3DSA:1.10.287.1050 CUB95_RS00825 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021505 Bacteriophage B3, Orf6 PF11363 CUB95_RS00840 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027848 Protein of unknown function DUF4494 PF14902 CUB95_RS00850 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.30.2000.10 CUB95_RS00855 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006522 Phage virion morphogensis protein PF05069 CUB95_RS00860 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006528|IPR009279 Phage head morphogenesis domain|Protein of unknown function DUF935 PF04233|PF06074|TIGR01641 CUB95_RS00865 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009752 Bacteriophage Mu, Gp36 PF07030 CUB95_RS00875 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:1.10.10.60 CUB95_RS00880 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR035443 Herpesvirus/Caudovirus protease domain G3DSA:3.20.16.10 CUB95_RS00890 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 G3DSA:3.40.80.10|PF01510|SSF55846 CUB95_RS00895 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.20.1170.10 CUB95_RS00905 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10 CUB95_RS00940 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008979 Galactose-binding domain-like G3DSA:2.60.120.260 CUB95_RS00950 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012327|IPR029063 D12 class N6 adenine-specific DNA methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0009007|GO:0032775 G3DSA:3.40.50.150|PF02086|SSF53335 CUB95_RS00955 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009009|IPR012997|IPR034718 Endolytic peptidoglycan transglycosylase RlpA|Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain GO:0016829 G3DSA:2.40.40.10|MF_02071|PF03330|SSF50685|TIGR00413 CUB95_RS00960 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006095|IPR006096|IPR006097|IPR014362|IPR016040|IPR033524 Glutamate dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal|Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain|Leu/Phe/Val dehydrogenases active site|NAD(P)-binding domain GO:0006520|GO:0016491|GO:0016639|GO:0055114 G3DSA:1.10.285.10|G3DSA:3.40.50.10860|G3DSA:3.40.50.720|PF00208|PF02812|PIRSF000185|PR00082|PS00074|SM00839|SSF51735|SSF53223 CUB95_RS00965 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000432|IPR017261|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS/MSH|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.40.50.300|PF00488|PIRSF037677|SM00534|SSF52540 CUB95_RS00980 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000362|IPR004769|IPR008948|IPR013539|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase|Adenylosuccinate lyase PurB, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0006188|GO:0009152 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF08328|PR00149|PS00163|SSF48557|TIGR00928 CUB95_RS00985 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|G3DSA:3.30.2350.10|PF00849|PF01479|PS01149|SM00363|SSF55120|SSF55174|TIGR00093 CUB95_RS00990 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002312|IPR004364|IPR004365|IPR004522|IPR012340 Aminoacyl-tRNA synthetase, class II (D/K/N)|Asparagine-tRNA ligase|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004816|GO:0005524|GO:0005737|GO:0006418|GO:0006421 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00534|PF00152|PF01336|PR01042|SSF50249|SSF55681|TIGR00457 CUB95_RS00995 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|SSF56436 CUB95_RS01005 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025684|IPR026377 Cell surface SprA|Gliding motility protein SprA N-terminal domain PF14349|TIGR04189 CUB95_RS01010 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000085|IPR003583|IPR010994|IPR011114|IPR012340|IPR013849 Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|Helix-hairpin-helix DNA-binding motif, class 1|Holliday junction DNA helicase RuvA, C-terminal|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003677|GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 G3DSA:1.10.150.20|G3DSA:1.10.340.30|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|PF14520|SM00278|SSF46929|SSF47781|SSF50249|TIGR00084 CUB95_RS01015 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000119|IPR010992|IPR011991 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|G3DSA:4.10.520.10|PF00216|SSF47729 CUB95_RS01020 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002052|IPR004398|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0031167|GO:0032259 G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|SSF53335 CUB95_RS01025 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024213 Protein of unknown function DUF3822 PF12864 CUB95_RS01030 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027417|IPR027785 P-loop containing nucleoside triphosphate hydrolase|UvrD-like helicase C-terminal domain G3DSA:3.40.50.300|PF13538|PF13604|SSF52540 CUB95_RS01035 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006640 SprT-like PF10263 CUB95_RS01045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000169|IPR004134 Cysteine peptidase, cysteine active site|Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 G3DSA:3.90.70.10|PF03051|PIRSF005700|PS00139|SSF54001 CUB95_RS01050 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004506|IPR014729|IPR023382 Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740|GO:0016783 G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|PF03054|SSF52402|TIGR00420 CUB95_RS01055 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003740|IPR019264 Domain of unknown function DUF2179|Uncharacterised membrane protein YitT PF02588|PF10035|PIRSF006483 CUB95_RS01060 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014729|IPR018317 Queuosine biosynthesis protein QueC|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|MF_01633|PF06508|PIRSF006293|SSF52402|TIGR00364 CUB95_RS01065 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001576|IPR015824 Phosphoglycerate kinase|Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 G3DSA:3.40.50.1260|MF_00145|PF00162|PIRSF000724|PR00477|SSF53748 CUB95_RS01075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|SSF51735 CUB95_RS01080 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003740|IPR019264 Domain of unknown function DUF2179|Uncharacterised membrane protein YitT PF02588|PF10035 CUB95_RS01085 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010870 Phosphate-selective porin O/P G3DSA:2.40.160.10|PF07396|SSF56935 CUB95_RS01090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|G3DSA:3.40.109.30|PF00881|SSF55469 CUB95_RS01095 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001647|IPR009057 DNA-binding HTH domain, TetR-type|Homeobox domain-like GO:0003677 G3DSA:1.10.10.60|PF00440|PR00455|SSF46689 CUB95_RS01105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005097|IPR016040|IPR032095 NAD(P)-binding domain|Saccharopine dehydrogenase, C-terminal|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF03435|PF16653|SSF51735 CUB95_RS01110 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007076 TfoX, N-terminal G3DSA:3.30.1460.30|PF04993|SSF159894 CUB95_RS01120 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003593|IPR013765|IPR020584|IPR023400|IPR027417 AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094 G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|SM00382|SSF52540|SSF54752|TIGR02012 CUB95_RS01130 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002053|IPR017853|IPR018077 Glycoside hydrolase superfamily|Glycoside hydrolase, family 25|Glycoside hydrolase, family 25 subgroup GO:0003796|GO:0009253|GO:0016998 G3DSA:2.20.110.10|G3DSA:3.20.20.80|PF01183|SM00641|SSF51445|SSF82185 CUB95_RS01135 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005181|IPR013830 SGNH hydrolase-type esterase domain|Sialate O-acetylesterase domain G3DSA:3.40.50.1110|PF03629|SSF52266 CUB95_RS01140 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000771|IPR011289|IPR013785 Aldolase-type TIM barrel|Fructose-1,6-bisphosphate aldolase, class 2|Fructose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832|GO:0030388 G3DSA:3.20.20.70|PF01116|PIRSF001359|SSF51569|TIGR00167|TIGR01859 CUB95_RS01145 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000631|IPR004443|IPR017953|IPR029056|IPR030677 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Bifunctional NAD(P)H-hydrate repair enzyme Nnr|Carbohydrate kinase, predicted, conserved site|Ribokinase-like|YjeF N-terminal domain GO:0052855 G3DSA:3.40.1190.20|G3DSA:3.40.50.10260|MF_01965|MF_01966|PF01256|PF03853|PIRSF017184|PS01050|SSF53613|SSF64153|TIGR00196|TIGR00197 CUB95_RS01150 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000836|IPR005904|IPR029057 Hypoxanthine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004422|GO:0005737|GO:0006166|GO:0009116 G3DSA:3.40.50.2020|PF00156|SSF53271|TIGR01203 CUB95_RS01155 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000850|IPR027417|IPR033690 Adenylate kinase, conserved site|Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006139|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PR00094|PS00113|SSF52540 CUB95_RS01160 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006073|IPR006074|IPR006169|IPR014100|IPR027417|IPR035101 GTP binding domain|GTP-binding protein Obg/CgtA|GTP-binding protein, Obg-type|GTP1/OBG domain|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0003924|GO:0005525 G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PIRSF002401|PR00326|PS00905|SSF52540|SSF82051|TIGR02729 CUB95_RS01165 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003730|IPR011324 Cytotoxic necrotizing factor-like, catalytic|Multi-copper polyphenol oxidoreductase G3DSA:3.60.140.10|PF02578|SSF64438|TIGR00726 CUB95_RS01170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|SM00422|SSF46955 CUB95_RS01175 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation protein, beta-barrel domain GO:0000166|GO:0003676|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0016876|GO:0043039 G3DSA:3.30.930.10|G3DSA:3.30.980.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 CUB95_RS01180 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.1710.10|PF12698 CUB95_RS01185 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000412 ABC-2 transporter GO:0006810|GO:0016020 G3DSA:3.40.1710.10|PF12698|PR00164 CUB95_RS01190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 CUB95_RS01195 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.20.5.50|G3DSA:2.40.50.100|PF13437|SSF111369 CUB95_RS01200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|SSF56954 CUB95_RS01205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009057|IPR014710|IPR018060 DNA binding HTH domain, AraC-type|Homeobox domain-like|RmlC-like jelly roll fold GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF12833|SM00342|SSF46689 CUB95_RS01210 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000534|IPR010190|IPR016040|IPR032094 Diaminopimelate dehydrogenase, Ddh|Meso-diaminopimelate D-dehydrogenase, C-terminal|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding GO:0009089|GO:0016620|GO:0047850|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01118|PF16654|PIRSF025648|SSF51735|SSF55347|TIGR01921 CUB95_RS01220 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001857|IPR008991|IPR018257 Ribosomal protein L19|Ribosomal protein L19, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00402|PF01245|PIRSF002191|PR00061|PS01015|SSF50104|TIGR01024 CUB95_RS01225 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006179|IPR008334 5'-Nucleotidase, C-terminal|5'-Nucleotidase/apyrase GO:0009166|GO:0016787 G3DSA:3.90.780.10|PF02872|PR01607|SSF55816 CUB95_RS01230 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004843|IPR006146|IPR006179|IPR029052 5'-Nucleotidase, conserved site|5'-Nucleotidase/apyrase|Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like GO:0000166|GO:0009166|GO:0016787|GO:0016788|GO:0046872 G3DSA:3.60.21.10|PF00149|PR01607|PS00785|PS00786|SSF56300 CUB95_RS01235 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025665 Outer membrane protein beta-barrel domain PF13568 CUB95_RS01240 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF00037|PS00198|SSF54862 CUB95_RS01250 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003812 Fido domain G3DSA:1.10.3290.10|SSF140931 CUB95_RS01255 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005821|IPR028325 Ion transport domain|Voltage-gated potassium channel GO:0005216|GO:0005249|GO:0006811|GO:0006813|GO:0008076|GO:0016020|GO:0055085 G3DSA:1.10.287.70|G3DSA:1.20.120.350|G3DSA:1.20.5.110|PF00520|PR00169|SSF81324 CUB95_RS01265 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic SSF56399 CUB95_RS01270 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011646|IPR027417 KAP family P-loop domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF07693|SSF52540 CUB95_RS01275 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003497|IPR003812 BRO N-terminal domain|Fido domain G3DSA:1.10.3290.10|PF02498|PF02661|SM01040|SSF140931 CUB95_RS01285 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003812|IPR011991 Fido domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:1.10.3290.10|PF13412|SSF140931|SSF46785 CUB95_RS01290 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 CUB95_RS01315 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005821|IPR028325 Ion transport domain|Voltage-gated potassium channel GO:0005216|GO:0005249|GO:0006811|GO:0006813|GO:0008076|GO:0016020|GO:0055085 G3DSA:1.10.287.70|G3DSA:1.20.120.350|G3DSA:1.20.5.110|PF00520|PR00169|SSF81324 CUB95_RS01325 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005151|IPR029045 ClpP/crotonase-like domain|Tail specific protease GO:0006508|GO:0008236 G3DSA:3.90.226.10|PF03572|SSF52096 CUB95_RS01330 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.420.40|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|SSF100920|SSF100934|SSF53067|TIGR02350 CUB95_RS01335 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005152|IPR029058 Alpha/Beta hydrolase fold|Lipase, secreted GO:0004806|GO:0016042 G3DSA:3.40.50.1820|PIRSF029171|SSF53474 CUB95_RS01340 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|SSF52058 CUB95_RS01350 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027823 Domain of unknown function DUF4468 with TBP-like fold PF14730 CUB95_RS01355 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002694|IPR006171|IPR006295|IPR013264|IPR019475|IPR030846 DNA primase DnaG, bacteria|DNA primase, DnaB-helicase binding domain|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|TOPRIM domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270|GO:0016779 G3DSA:1.20.50.20|G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF10410|PF13155|SM00400|SM00493|SSF56731|SSF57783|TIGR01391 CUB95_RS01360 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001736|IPR022924|IPR025202|IPR027379|IPR030874 Cardiolipin synthase|Cardiolipin synthase N-terminal|Cardiolipin synthase, Firmicutes-type|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824|GO:0008808|GO:0016780|GO:0032049 G3DSA:3.30.870.10|MF_01916|PF13091|PF13396|SM00155|SSF56024|TIGR04265 CUB95_RS01365 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 CUB95_RS01370 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|MF_01368|PF01196|PS01167|SSF64263|TIGR00059 CUB95_RS01375 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009025|IPR011260|IPR011262|IPR011263|IPR011773 DNA-directed RNA polymerase, RBP11-like dimerisation domain|DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 CUB95_RS01380 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001912|IPR002942|IPR005709|IPR018079 RNA-binding S4 domain|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|SM00363|SM01390|SSF55174|TIGR01017 CUB95_RS01385 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001971|IPR018102|IPR019981 Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|SSF53137|TIGR03632 CUB95_RS01390 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001892|IPR010979|IPR018269|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13, conserved site|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PS00646|SSF46946|TIGR03631 CUB95_RS01395 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00251|PD002101|PF00444|SSF57840|TIGR01022 CUB95_RS01400 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004368|IPR006196|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|SM00316|SSF50249|TIGR00008 CUB95_RS01405 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY subunit domain|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00755|PS00756|SSF103491|TIGR00967 CUB95_RS01410 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001196|IPR005749|IPR021131|IPR030878 Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L15, conserved site|Ribosomal protein L18e/L15P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|PS00475|SSF52080|TIGR01071 CUB95_RS01415 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005996|IPR016082|IPR018038 Ribosomal protein L30, bacterial-type|Ribosomal protein L30, conserved site|Ribosomal protein L30, ferredoxin-like fold domain GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.1390.20|MF_01371_B|PF00327|PIRSF002211|PS00634|SSF55129|TIGR01308 CUB95_RS01420 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005324|IPR005712|IPR013810|IPR014721|IPR018192|IPR020568 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|SSF54211|SSF54768|TIGR01021 CUB95_RS01425 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|SSF53137|TIGR00060 CUB95_RS01430 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000702|IPR002358|IPR019906|IPR020040 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, bacterial-type|Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|MF_01365_B|PF00347|PIRSF002162|PR00059|PS00525|SSF56053|TIGR03654 CUB95_RS01435 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PS00053|SSF56047 CUB95_RS01440 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001209|IPR018271|IPR023036 Ribosomal protein S14|Ribosomal protein S14, bacterial/plastid|Ribosomal protein S14, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_00537|PF00253|PS00527|SSF57716 CUB95_RS01445 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002132|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|SSF55282 CUB95_RS01450 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003256|IPR005824|IPR005825|IPR008991|IPR014722 KOW|Ribosomal protein L2 domain 2|Ribosomal protein L24|Ribosomal protein L24/L26, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF00467|PF17136|PS01108|SM00739|SSF50104|TIGR01079 CUB95_RS01455 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000218|IPR005745|IPR019972 Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|SM01374|SSF50193|TIGR01067 CUB95_RS01460 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000266|IPR012340|IPR019979|IPR019984 30S ribosomal protein S17|Nucleic acid-binding, OB-fold|Ribosomal protein S17, conserved site|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PS00056|SSF50249|TIGR03635 CUB95_RS01465 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001854|IPR018254 Ribosomal protein L29, conserved site|Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|PS00579|SSF46561|TIGR00012 CUB95_RS01470 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000114|IPR016180|IPR020798 Ribosomal protein L10e/L16|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00701|SSF54686|TIGR01164 CUB95_RS01475 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280 K Homology domain|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|SM00322|SSF54814|SSF54821|TIGR01009 CUB95_RS01480 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001063|IPR005727 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|MF_01331_B|PF00237|SSF54843|TIGR01044 CUB95_RS01485 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|SSF54570|TIGR01050 CUB95_RS01490 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2 domain 2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 3|Translation protein SH3-like domain GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 CUB95_RS01495 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012678|IPR013025 Ribosomal protein L23/L15e core domain|Ribosomal protein L25/L23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|SSF54189 CUB95_RS01500 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|MF_01328_B|PF00573|SSF52166|TIGR03953 CUB95_RS01505 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000597|IPR009000|IPR019926|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation protein, beta-barrel domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.960.10|MF_01325_B|PF00297|PS00474|SSF50447|TIGR03625 CUB95_RS01510 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001848|IPR018268|IPR027486 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|SM01403|SSF54999|TIGR01049 CUB95_RS01515 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR014721|IPR020568|IPR027417|IPR031157|IPR035647 EF-G domain III/V-like|Elongation factor EFG, domain V-like|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 CUB95_RS01520 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000235|IPR005717|IPR023798 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|SSF47973|TIGR01029 CUB95_RS01525 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacterial-type|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|SSF50249|TIGR00981 CUB95_RS01535 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021857 Protein of unknown function DUF3467 PF11950 CUB95_RS01550 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|SSF47413 CUB95_RS01560 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10 CUB95_RS01565 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003593|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13401|SSF52540 CUB95_RS01580 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 CUB95_RS01585 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003647|IPR010896|IPR011991 Intron encoded nuclease repeat|Nuclease-associated modular DNA-binding 1|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF07453|SM00497 CUB95_RS01590 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 G3DSA:1.20.1580.10|SSF57938 CUB95_RS01595 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010024|IPR019096|IPR023385 Conserved hypothetical protein CHP1671|YopX protein|YopX-like domain, beta barrel type G3DSA:2.30.30.290|PF09643|SSF159006|TIGR01671 CUB95_RS01615 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 G3DSA:1.20.5.170|PF07352|SSF161266 CUB95_RS01625 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006522 Phage virion morphogensis protein PF05069 CUB95_RS01635 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006528 Phage head morphogenesis domain PF04233 CUB95_RS01640 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009279 Protein of unknown function DUF935 PF06074 CUB95_RS01645 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009752 Bacteriophage Mu, Gp36 PF07030 CUB95_RS01660 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010332|IPR011991 ATPase terminase subunit, putative|Winged helix-turn-helix DNA-binding domain GO:0005524|GO:0019069 G3DSA:1.10.10.10|G3DSA:1.10.10.60|PF06056 CUB95_RS01665 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006433|IPR035443 Herpesvirus/Caudovirus protease domain|Prohead protease G3DSA:3.20.16.10|PF04586 CUB95_RS01680 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 G3DSA:3.40.80.10|PF01510|SSF55846 CUB95_RS01710 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013491|IPR027267 Arfaptin homology (AH) domain/BAR domain|Caudovirus, tape measure, N-terminal G3DSA:1.20.1170.10|G3DSA:1.20.58.60|SSF103657|TIGR02675 CUB95_RS01740 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.10.10.60 CUB95_RS01745 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012327|IPR029063 D12 class N6 adenine-specific DNA methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0009007|GO:0032775 G3DSA:3.40.50.150|PF02086|SSF53335 CUB95_RS01750 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain G3DSA:3.30.572.10|PF00303|SSF55831 CUB95_RS01775 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.40.20|G3DSA:2.40.50.100|MF_01322|PF00623|PF04983|PF04997|PF04998|PF05000|SM00663|SSF64484|TIGR02386 CUB95_RS01780 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR019462 DNA-directed RNA polymerase beta subunit, bacterial-type|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2, domain 6|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1800.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|SSF64484|TIGR02013 CUB95_RS01785 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000206|IPR008932|IPR013823|IPR014719 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|SSF48300|SSF54736|TIGR00855 CUB95_RS01790 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 PF00466|SSF160369 CUB95_RS01795 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002143|IPR005878|IPR016095|IPR023673|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|SSF56808|TIGR01169 CUB95_RS01800 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000911|IPR006519|IPR020783|IPR020784|IPR020785 Ribosomal protein L11, C-terminal|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11, conserved site|Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|PS00359|SM00649|SSF46906|SSF54747|TIGR01632 CUB95_RS01805 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001062|IPR005824|IPR006645|IPR008991|IPR014722 KOW|NusG, N-terminal|Ribosomal protein L2 domain 2|Transcription antitermination protein, NusG|Translation protein SH3-like domain GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF00467|PF02357|PR00338|SM00738|SM00739|SSF50104|SSF82679|TIGR00922 CUB95_RS01810 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001901|IPR005807|IPR022943 Preprotein translocase subunit SecE|Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|TIGR00964 CUB95_RS01820 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu-like, domain 2|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 CUB95_RS01845 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 G3DSA:3.30.160.100|PF02482|SSF69754|TIGR00741 CUB95_RS01850 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR004107|IPR011010|IPR011931|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|SSF56349|TIGR02224 CUB95_RS01855 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 G3DSA:1.20.5.1150|MF_00358|PD005521|PF01165|PR00976|TIGR00030 CUB95_RS01860 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 CUB95_RS01870 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000587|IPR000994|IPR001131|IPR028980|IPR029149|IPR032416 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24|Peptidase M24, C-terminal domain|Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|PF16188|PF16189|PS00491|SSF53092|SSF55920 CUB95_RS01875 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001478|IPR005151|IPR011659|IPR012393|IPR015943|IPR028204|IPR029045 ClpP/crotonase-like domain|PDZ domain|Tail specific protease|Tricorn protease|Tricorn protease C1 domain|WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0006508|GO:0008236 G3DSA:2.130.10.10|G3DSA:2.130.10.150|G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF07676|PF14684|PIRSF036421|SSF50156|SSF52096|SSF69304 CUB95_RS01880 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003961|IPR013783|IPR026444 Fibronectin type III|Immunoglobulin-like fold|Secretion system C-terminal sorting domain GO:0005515 G3DSA:2.60.40.10|SM00060|SSF49265|TIGR04183 CUB95_RS01885 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003961|IPR011635|IPR013783|IPR026444 CARDB domain|Fibronectin type III|Immunoglobulin-like fold|Secretion system C-terminal sorting domain GO:0005515 G3DSA:2.60.40.10|PF07705|SM00060|SSF49265|TIGR04183 CUB95_RS01890 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783|IPR021615 Immunoglobulin-like fold|Outer membrane protein Omp28 G3DSA:2.60.40.10|PF11551 CUB95_RS01895 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783|IPR021615 Immunoglobulin-like fold|Outer membrane protein Omp28 G3DSA:2.60.40.10|G3DSA:3.40.30.10|PF11551 CUB95_RS01900 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001497|IPR008332|IPR011991|IPR014048|IPR023546 Methylated-DNA--protein-cysteine methyltransferase|Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|G3DSA:3.30.160.70|MF_00772|PF01035|PS00374|SSF46767|SSF53155|TIGR00589 CUB95_RS01910 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain G3DSA:3.30.1380.10|SSF55166 CUB95_RS01915 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019271 Protein of unknown function DUF2284, metal-binding PF10050 CUB95_RS01920 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001236|IPR001557|IPR015955|IPR016040|IPR022383 L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|NAD(P)-binding domain GO:0003824|GO:0005975|GO:0016491|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|PF00056|PF02866|PIRSF000102|PR00086|SSF51735|SSF56327 CUB95_RS01925 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025578 Protein of unknown function DUF4359 G3DSA:2.20.70.10|PF14271 CUB95_RS01930 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family G3DSA:3.90.1720.10|PF05708|SSF54001 CUB95_RS01940 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.40.160.60|SSF56935 CUB95_RS01950 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001650|IPR005259|IPR011545|IPR014001|IPR027417 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Primosomal protein N' GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006260|GO:0032508 G3DSA:3.40.50.300|MF_00983|PF00270|PF00271|SM00487|SM00490|SSF52540|TIGR00595 CUB95_RS01955 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003607|IPR006674|IPR006675|IPR011621|IPR011624 HD domain|HD/PDEase domain|HDIG domain|Metal-dependent phosphohydrolase, 7TM extracellular domain|Metal-dependent phosphohydrolase, 7TM intracellular domain G3DSA:1.10.3210.10|PF01966|PF07697|PF07698|SM00471|SSF109604|TIGR00277 CUB95_RS01965 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039 G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:3.40.50.620|MF_00022|PF00749|PR00987|PS00178|SSF48163|SSF52374|TIGR00464 CUB95_RS01970 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal G3DSA:3.40.50.2000|PF04413|SSF53756 CUB95_RS01980 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001412|IPR002305|IPR002306|IPR014729 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|PF00579|PR01039|PS00178|SSF52374|TIGR00233 CUB95_RS01995 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004839|IPR015421|IPR015422|IPR015424|IPR027619 Aminotransferase, class I/classII|Putative C-S lyase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383|TIGR04350 CUB95_RS02000 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011050|IPR012334|IPR022208 Pectin lyase fold|Pectin lyase fold/virulence factor|Protein of unknown function DUF3737 G3DSA:2.160.20.10|PF12541|SSF51126 CUB95_RS02005 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284|IPR014327 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70, Bacteroidetes type|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937|TIGR02985 CUB95_RS02010 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006860|IPR012373|IPR014710 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF04773|PIRSF018266 CUB95_RS02015 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF13715|SSF49464|SSF56935 CUB95_RS02020 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012337|IPR025668 Ribonuclease H-like domain|Transposase DDE domain GO:0003676 PF13612|SSF53098 CUB95_RS02025 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 CUB95_RS02030 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019847 Gliding motility associated protein GldN TIGR03523 CUB95_RS02035 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019859|IPR022719|IPR022720 Gliding motility-associated protein GldM|Gliding motility-associated protein GldM, C-terminal|Gliding motility-associated protein GldM, N-terminal PF12080|PF12081|TIGR03517 CUB95_RS02040 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019852 Gliding motility-associated protein, GldL G3DSA:1.20.120.570|TIGR03513 CUB95_RS02045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|SSF56436 CUB95_RS02050 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019861 Type IX secretion system membrane protein, PorP/SprF family G3DSA:2.40.160.10|PF11751|TIGR03519 CUB95_RS02055 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021527 Protein of unknown function DUF2795 PF11387 CUB95_RS02060 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016030|IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type|Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like G3DSA:1.20.1200.10|PD007457|PF01923|SSF89028|TIGR00636 CUB95_RS02075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010994 RuvA domain 2-like G3DSA:1.10.150.320|PF12836|SSF47781 CUB95_RS02080 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007829 TM2 domain PF05154 CUB95_RS02085 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021215 Protein of unknown function DUF2752 PF10825 CUB95_RS02090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007593 CD225/Dispanin family GO:0009607|GO:0016021 PF04505 CUB95_RS02120 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|SSF102405|TIGR00730 CUB95_RS02125 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021768 Protein of unknown function DUF3332 PF11810 CUB95_RS02135 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 CUB95_RS02140 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001279|IPR008254|IPR016440|IPR029039 Flavodoxin/nitric oxide synthase|Flavoprotein-like domain|Metallo-beta-lactamase|Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 G3DSA:3.40.50.360|G3DSA:3.60.15.10|PF00258|PF00753|PIRSF005243|SM00849|SSF52218|SSF56281 CUB95_RS02145 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001431|IPR007863|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|SSF63411 CUB95_RS02150 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin-like phospholipase domain GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 CUB95_RS02155 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|SSF52058 CUB95_RS02165 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018691 Protein of unknown function DUF2188 PF09954 CUB95_RS02170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 CUB95_RS02175 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.20.5.780 CUB95_RS02180 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS02185 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|PF01807|PF13155|SSF56731|SSF57783 CUB95_RS02190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007936 Virulence-associated E PF05272 CUB95_RS02200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061 Putative DNA-binding domain G3DSA:1.10.1660.10|PF12728|SSF46955 CUB95_RS02205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS02210 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000594 THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|SSF69572 CUB95_RS02215 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|SM00421|SSF46894 CUB95_RS02220 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 CUB95_RS02225 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000385|IPR007197|IPR013785|IPR023885 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Radical SAM GO:0003824|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|PF04055|PF13353|PS01305|SSF102114|TIGR04085 CUB95_RS02230 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF14905|SSF49464|SSF56935 CUB95_RS02235 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR005074|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0006810|GO:0008233|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PF03412|PS00211|SM00382|SSF52540|SSF90123 CUB95_RS02250 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS02255 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS02275 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:1.20.5.170|G3DSA:2.70.70.10|PF01551|SSF51261 CUB95_RS02280 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025634 Protein of unknown function DUF4292 G3DSA:2.50.20.10|PF14125 CUB95_RS02285 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|SM00028|SSF48452 CUB95_RS02290 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008181|IPR029054 Deoxyuridine triphosphate nucleotidohydrolase|dUTPase-like GO:0004170|GO:0046080 G3DSA:2.70.40.10|MF_00116|PF00692|SSF51283|TIGR00576 CUB95_RS02295 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003607|IPR006261|IPR006674|IPR023293|IPR026875 Deoxyguanosinetriphosphate triphosphohydrolase, central domain|HD domain|HD/PDEase domain|Phosphohydrolase-associated domain|dNTP triphosphohydrolase GO:0016793 G3DSA:1.10.3210.10|G3DSA:1.10.3410.10|PF01966|PF13286|SM00471|SSF109604|TIGR01353 CUB95_RS02300 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008886|IPR029058 Alpha/Beta hydrolase fold|Uncharacterised protein family UPF0227/Esterase YqiA G3DSA:3.40.50.1820|PF05728|SSF53474 CUB95_RS02305 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13086|PF13087|SSF52540 CUB95_RS02315 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002505|IPR004614|IPR012147 Phosphate acetyl/butaryl transferase|Phosphate acetyl/butyryltransferase|Phosphate acetyltransferase GO:0008152|GO:0016407|GO:0016746 G3DSA:3.40.718.10|PF01515|PIRSF000428|SSF53659|TIGR00651 CUB95_RS02320 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|SSF53067|TIGR00016 CUB95_RS02325 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 CUB95_RS02330 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004839|IPR011282|IPR015421|IPR015422|IPR015424 2-amino-3-ketobutyrate coenzyme A ligase|Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0006567|GO:0008890|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00985|PF00155|SSF53383|TIGR01822 CUB95_RS02335 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005901 GLPGLI family protein PF09697|TIGR01200 CUB95_RS02340 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.160.10|G3DSA:2.60.40.1120|SSF49464|SSF56935 CUB95_RS02345 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002935|IPR029063 O-methyltransferase, family 3|S-adenosyl-L-methionine-dependent methyltransferase GO:0008171 G3DSA:3.40.50.150|PF01596|SSF53335 CUB95_RS02350 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001874|IPR018509 Dehydroquinase, class II|Dehydroquinase, class II, conserved site GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|PS01029|SSF52304|TIGR01088 CUB95_RS02355 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|SSF56349 CUB95_RS02360 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009057|IPR013749|IPR018060|IPR020449|IPR029056 DNA binding HTH domain, AraC-type|Homeobox domain-like|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.1190.20|PF08543|PF12833|PR00032|SM00342|SSF46689|SSF53613 CUB95_RS02375 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007497|IPR016907 Protein of unknown function DUF541|Uncharacterised conserved protein UCP029033, periplasmic protein PF04402|PIRSF029033 CUB95_RS02380 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003961|IPR013783 Fibronectin type III|Immunoglobulin-like fold GO:0005515 G3DSA:2.60.40.10|SSF49265 CUB95_RS02385 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005650|IPR011991 BlaI transcriptional regulatory family|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0045892 G3DSA:1.10.10.10|G3DSA:1.10.4040.10|PF03965|PIRSF019455|SSF46785 CUB95_RS02390 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006260|IPR008756 Peptidase M56|TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|PF05569|SSF74653|TIGR01352 CUB95_RS02395 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002869|IPR002880|IPR009014|IPR019752|IPR022367|IPR029061|IPR033412 2-oxoacid:acceptor oxidoreductase, alpha subunit|Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0016903|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|G3DSA:3.40.920.10|PF01558|PF01855|PF17147|SSF52518|SSF52922|SSF53323|TIGR03710 CUB95_RS02400 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|SSF52518 CUB95_RS02405 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR016102|IPR017866 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, succinyl-CoA synthetase-type|Succinate--CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0006099|GO:0008152 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|MF_00558|PF00549|PF08442|PIRSF001554|PS01217|SSF52210|SSF56059|TIGR01016 CUB95_RS02410 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003781|IPR005810|IPR016040|IPR016102|IPR017440|IPR032875|IPR033847 ATP-citrate lyase/succinyl-CoA ligase, active site|ATP-citrate lyase/succinyl-CoA ligase, conserved site|CoA-binding|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0003824|GO:0008152|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|MF_01988|PF02629|PF13607|PIRSF001553|PR01798|PS00399|PS01216|SM00881|SSF51735|SSF52210|TIGR01019 CUB95_RS02420 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001412|IPR002547|IPR004495|IPR009080|IPR012340|IPR013155|IPR014729|IPR014758|IPR015413|IPR023458|IPR029038|IPR033911 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Methionine-tRNA ligase, type 1|Methioninyl-tRNA synthetase core domain|Methionyl-tRNA synthetase|Methionyl-tRNA synthetase, Zn-domain|Methionyl-tRNA synthetase, beta subunit, C-terminal|Methionyl/Leucyl tRNA synthetase|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Nucleic acid-binding, OB-fold|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-binding domain GO:0000049|GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.40.50.140|G3DSA:3.40.50.620|MF_00098|PF01588|PF08264|PF09334|PR01041|PS00178|SSF47323|SSF50249|SSF52374|SSF57770|TIGR00398|TIGR00399 CUB95_RS02425 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003593|IPR025420|IPR027417 AAA+ ATPase domain|Domain of unknown function DUF4143|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13173|PF13635|SM00382|SSF52540 CUB95_RS02430 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025921 HmuY protein PF14064 CUB95_RS02440 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005502 ADP-ribosylation/Crystallin J1 G3DSA:1.10.4080.10|PF03747|SSF101478 CUB95_RS02450 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF07715|PF13715|PF14905|SSF49464|SSF56935 CUB95_RS02455 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007339|IPR016865 Inner membrane protein RclC|Protein of unknown function DUF417 PF04224|PIRSF028065 CUB95_RS02460 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003961|IPR008979|IPR011628|IPR013783|IPR015943 Cleaved adhesin|Fibronectin type III|Galactose-binding domain-like|Immunoglobulin-like fold|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|G3DSA:2.60.120.200|G3DSA:2.60.120.260|G3DSA:2.60.40.10|PF07675|SM00060|SSF49785|SSF63825 CUB95_RS02465 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001867|IPR011991|IPR016032 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00486|SM00862|SSF46894 CUB95_RS02475 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|SSF56935 CUB95_RS02480 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002744|IPR034904 Fe-S cluster assembly domain|MIP18 family-like G3DSA:3.30.300.130|PF01883|SSF117916 CUB95_RS02485 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 CUB95_RS02490 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004603|IPR011335 DNA mismatch endonuclease vsr|Restriction endonuclease type II-like GO:0004519|GO:0006298 G3DSA:3.40.960.10|PF03852|SSF52980|TIGR00632 CUB95_RS02495 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS02505 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR010093|IPR011991 Putative DNA-binding domain|SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|SSF46955|TIGR01764 CUB95_RS02510 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 G3DSA:3.40.600.10 CUB95_RS02520 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS02530 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS02545 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011991|IPR024978 Homeodomain, phBC6A51-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13022 CUB95_RS02555 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917 CUB95_RS02560 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF159283|SSF53448 CUB95_RS02565 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001310|IPR011146 HIT-like domain|Histidine triad (HIT) protein GO:0003824 G3DSA:3.30.428.10|PF01230|PR00332|SSF54197 CUB95_RS02570 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001437|IPR006359|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|SSF46557|SSF54534|TIGR01462 CUB95_RS02575 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005665|IPR005791|IPR022645|IPR022646|IPR022813 Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01463_B|MF_01464_B|PF02355|PF07549|PR01755|SSF82866|TIGR00916|TIGR00966|TIGR01129 CUB95_RS02580 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|PF03372|SSF56219 CUB95_RS02585 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 G3DSA:1.20.1540.10|PF01694|SSF144091 CUB95_RS02590 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|SM00411|SSF47729 CUB95_RS02605 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002161|IPR021196|IPR029062 Class I glutamine amidotransferase-like|PdxT/SNO family, conserved site|Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 G3DSA:3.40.50.880|MF_01615|PF01174|PIRSF005639|PS01236|SSF52317|TIGR03800 CUB95_RS02610 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001852|IPR011060|IPR013785|IPR033755 Aldolase-type TIM barrel|PdxS/SNZ N-terminal domain|Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ|Ribulose-phosphate binding barrel GO:0003824|GO:0008152|GO:0042819|GO:0042823 G3DSA:3.20.20.70|MF_01824|PF01680|PIRSF029271|PS01235|SSF51366|TIGR00343 CUB95_RS02625 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|SSF52058 CUB95_RS02630 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011635|IPR012336|IPR013783|IPR021615 CARDB domain|Immunoglobulin-like fold|Outer membrane protein Omp28|Thioredoxin-like fold G3DSA:2.60.40.10|G3DSA:3.40.30.10|PF07705|PF11551|SSF52833 CUB95_RS02635 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 G3DSA:3.60.60.10|PF03577 CUB95_RS02640 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011040|IPR015943 Sialidases|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.120.10.10|G3DSA:2.130.10.10|SSF50939 CUB95_RS02645 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 CUB95_RS02650 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|SSF64005|TIGR00055 CUB95_RS02655 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010827|IPR023707 Outer membrane protein assembly factor BamA|POTRA domain, BamA/TamA-like GO:0019867|GO:0071709 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF07244|PIRSF006076 CUB95_RS02660 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|SM00935|SSF111384 CUB95_RS02665 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|SM00935|SSF111384 CUB95_RS02670 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|SM00935|SSF111384 CUB95_RS02675 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001920|IPR004391|IPR015942|IPR018187|IPR033134 Asp/Glu racemase|Asp/Glu racemase, active site 1|Asp/Glu racemase, active site 2|Asp/Glu/hydantoin racemase|Glutamate racemase GO:0006807|GO:0008152|GO:0008881|GO:0009252|GO:0016855|GO:0036361 G3DSA:3.40.50.1860|MF_00258|PF01177|PS00923|PS00924|SSF53681|TIGR00067 CUB95_RS02680 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002156|IPR012337|IPR017290 Ribonuclease H domain|Ribonuclease H, Bacteroides-type|Ribonuclease H-like domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|PF00075|PIRSF037839|SSF53098 CUB95_RS02685 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018637 Domain of unknown function DUF2059 PF09832 CUB95_RS02690 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729|IPR035684 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|Arginyl-tRNA synthetase, catalytic core domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456 CUB95_RS02695 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 CUB95_RS02705 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PF02652|TIGR00795 CUB95_RS02710 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002792|IPR005839|IPR006463|IPR006638|IPR007197|IPR013848|IPR023404 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe|TRAM domain|tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0003824|GO:0005737|GO:0006400|GO:0016740|GO:0051536|GO:0051539 G3DSA:2.40.50.140|G3DSA:3.80.30.20|MF_01864|PF00919|PF01938|PF04055|SM00729|SSF102114|TIGR00089|TIGR01574 CUB95_RS02715 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 CUB95_RS02720 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000917|IPR012160|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Lipoteichoic acid synthase-like|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|PIRSF005091|SSF53649 CUB95_RS02725 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 CUB95_RS02735 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PF03279 CUB95_RS02740 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007074 LicD family PF04991 CUB95_RS02745 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 G3DSA:3.40.50.2000|PF04464|SSF53756 CUB95_RS02750 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR024169 Aminotransferase class V domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|SSF53383 CUB95_RS02755 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000683|IPR004821|IPR014729|IPR016040 Cytidyltransferase-like domain|NAD(P)-binding domain|Oxidoreductase, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.620|G3DSA:3.40.50.720|PF01408|PF01467|SSF51735|SSF52374|SSF55347|TIGR00125 CUB95_RS02775 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002125|IPR002734|IPR004794|IPR016193|IPR024072 Bacterial bifunctional deaminase-reductase, C-terminal|Cytidine and deoxycytidylate deaminase domain|Cytidine deaminase-like|Dihydrofolate reductase-like domain|Riboflavin biosynthesis protein RibD GO:0003824|GO:0008703|GO:0008835|GO:0009231|GO:0055114 G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|SSF53597|SSF53927|TIGR00326 CUB95_RS02780 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002052|IPR004556|IPR007848|IPR019874|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:1.10.8.10|G3DSA:3.40.50.150|PF05175|PS00092|SSF53335|TIGR00536|TIGR03534 CUB95_RS02785 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003783|IPR011991 Regulatory protein RecX|Winged helix-turn-helix DNA-binding domain GO:0006282 G3DSA:1.10.10.10|MF_01114|PF02631 CUB95_RS02790 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|SSF53271 CUB95_RS02800 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|SSF55973|TIGR01034 CUB95_RS02805 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025367 Protein of unknown function DUF4271 PF14093 CUB95_RS02810 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 G3DSA:3.40.50.10090|PF02602|SSF69618 CUB95_RS02815 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000100|IPR014721|IPR020539|IPR020568 Ribonuclease P|Ribonuclease P, conserved site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|MF_00227|PD003629|PF00825|PS00648|SSF54211 CUB95_RS02820 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002696 Putative membrane protein insertion efficiency factor MF_00386|PD004225|PF01809|SM01234|TIGR00278 CUB95_RS02825 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001412|IPR002305|IPR002307|IPR002942|IPR014729|IPR024107 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437 G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02006|PF00579|PR01040|PS00178|SSF52374|SSF55174|TIGR00234 CUB95_RS02830 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000917|IPR012159|IPR017849|IPR017850|IPR024588 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Inner membrane protein YejM|Inner membrane protein YejM, N-terminal|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|PF11893|PIRSF004950|SSF53649 CUB95_RS02840 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10 CUB95_RS02845 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026444 Secretion system C-terminal sorting domain TIGR04183 CUB95_RS02850 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006083|IPR012675|IPR018163|IPR027417 Beta-grasp domain|P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase/uridine kinase|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0005524|GO:0008152|GO:0016301 G3DSA:3.10.20.30|G3DSA:3.30.980.10|G3DSA:3.40.50.300|PF00485|SSF52540|SSF55186 CUB95_RS02855 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003841|IPR004633|IPR026022 Na/Pi-cotransporter II-related/YqeW-like protein|PhoU domain|Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 G3DSA:1.20.58.220|PF01895|PF02690|SSF109755|TIGR00704 CUB95_RS02860 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000489|IPR006390|IPR011005 Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding domain GO:0004156|GO:0009396|GO:0042558|GO:0044237 G3DSA:3.20.20.20|PF00809|PS00793|SSF51717|TIGR01496 CUB95_RS02865 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003390|IPR014046|IPR034701 DNA integrity scanning protein, DisA, N-terminal|Diadenylate cyclase|Diadenylate cyclase CdaA GO:0004016|GO:0006171 G3DSA:3.40.1700.10|MF_01499|PF02457|PIRSF004793|SSF143597|TIGR00159 CUB95_RS02875 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001669|IPR011991|IPR020899|IPR020900|IPR024946 Arginine repressor|Arginine repressor C-terminal-like domain|Arginine repressor, C-terminal|Arginine repressor, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355|GO:0006525|GO:0034618|GO:0051259 G3DSA:1.10.10.10|G3DSA:3.30.1360.40|MF_00173|PD007402|PF01316|PF02863|PR01467|SSF46785|SSF55252 CUB95_RS02880 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 CUB95_RS02885 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021255 Putative auto-transporter adhesin, head GIN domain PF10988 CUB95_RS02895 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000524|IPR011991 Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.10.287.100|PF00392|SM00345|SSF46785 CUB95_RS02900 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008753|IPR018497|IPR024079 Metallopeptidase, catalytic domain|Peptidase M13, C-terminal domain|Peptidase M13, N-terminal domain GO:0004222|GO:0006508|GO:0008237 G3DSA:3.40.390.10|PF01431|PF05649|PR00786|SSF55486 CUB95_RS02910 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|SSF56801 CUB95_RS02915 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000352|IPR005139 Peptide chain release factor|Peptide chain release factor class I/class II GO:0003747|GO:0006415 G3DSA:1.20.58.410|G3DSA:3.30.160.20|PF00472|PF03462|PS00745|SM00937|SSF75620 CUB95_RS02920 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012042|IPR023577|IPR033469 CYTH domain|CYTH-like domain|Inorganic triphosphatase NeuTTM/CthTTM-like G3DSA:2.40.320.10|PF01928|PIRSF016487|SM01118|SSF55154 CUB95_RS02930 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010994 RuvA domain 2-like G3DSA:1.10.150.20|G3DSA:1.10.150.280|G3DSA:1.10.150.310|PF12836|SSF47781 CUB95_RS02955 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF07715|PF13715|SSF49464|SSF56935 CUB95_RS02960 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005130|IPR021144 Serine dehydratase-like, alpha subunit|Uncharacterised protein family UPF0597 G3DSA:1.10.4100.10|MF_01845|PF03313|PIRSF006054 CUB95_RS02965 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004399|IPR013749|IPR029056 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like GO:0008972|GO:0009228 G3DSA:3.40.1190.20|PF08543|SSF53613|TIGR00097 CUB95_RS02970 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013785|IPR022998|IPR034291 Aldolase-type TIM barrel|Thiamine phosphate synthase|Thiamine phosphate synthase/TenI GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|MF_00097|PF02581|SSF51391|TIGR00693 CUB95_RS02975 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002817|IPR025747 Phosphomethylpyrimidine synthase|ThiC-associated domain GO:0009228|GO:0051536 MF_00089|PF01964|PF13667|TIGR00190 CUB95_RS02980 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002922|IPR022828|IPR023753 FAD/NAD(P)-binding domain|Thiazole biosynthetic enzyme Thi4 family|Thiazole biosynthetic enzyme, putative GO:0016491|GO:0055114 G3DSA:3.50.50.60|MF_00304|PF01946|PR00419|SSF51905|TIGR00292 CUB95_RS02985 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013785|IPR022998 Aldolase-type TIM barrel|Thiamine phosphate synthase/TenI GO:0003824 G3DSA:3.20.20.70|PF02581|SSF51391 CUB95_RS02990 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010619 Putative threonine/serine exporter PF06738 CUB95_RS02995 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024528 Threonine/Serine exporter, ThrE PF12821 CUB95_RS03000 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 CUB95_RS03010 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000889|IPR012336|IPR029759|IPR029760 Glutathione peroxidase|Glutathione peroxidase active site|Glutathione peroxidase conserved site|Thioredoxin-like fold GO:0004602|GO:0006979|GO:0055114 G3DSA:3.40.30.10|PF00255|PIRSF000303|PR01011|PS00460|PS00763|SSF52833 CUB95_RS03015 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003000|IPR029035 DHS-like NAD/FAD-binding domain|Sirtuin family GO:0070403 G3DSA:3.40.50.1220|PF02146|SSF52467 CUB95_RS03020 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000774|IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 G3DSA:1.10.287.460|G3DSA:3.10.50.40|PF00254|PF01346|SSF54534 CUB95_RS03025 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000774|IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 G3DSA:1.10.287.460|G3DSA:3.10.50.40|PF00254|PF01346|SSF54534 CUB95_RS03030 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000774|IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 G3DSA:1.10.287.460|G3DSA:3.10.50.40|PF00254|PF01346|SSF54534 CUB95_RS03035 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13404|PR00033|SM00344|SSF46785|SSF54909 CUB95_RS03040 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008257|IPR011697|IPR029062|IPR032466 Class I glutamine amidotransferase-like|Metal-dependent hydrolase|Peptidase C26|Renal dipeptidase family GO:0006508|GO:0016787|GO:0016805 G3DSA:3.20.20.140|G3DSA:3.40.50.880|PF01244|PF07722|SSF51556|SSF52317 CUB95_RS03045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007484 Peptidase M28 G3DSA:3.40.630.10|PF04389|SSF53187 CUB95_RS03050 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 G3DSA:3.90.70.10|PF03051|SSF54001 CUB95_RS03055 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001789|IPR007492|IPR011006 CheY-like superfamily|LytTR DNA-binding domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677 G3DSA:2.40.50.40|G3DSA:3.40.50.2300|PF00072|PF04397|SM00448|SM00850|SSF52172 CUB95_RS03060 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003594|IPR010559 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 G3DSA:3.30.565.10|PF06580|SSF55874 CUB95_RS03065 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783|IPR032675 Immunoglobulin-like fold|Leucine-rich repeat domain, L domain-like G3DSA:2.60.40.10|G3DSA:3.80.10.10|SSF52058 CUB95_RS03070 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000836|IPR004467|IPR023031|IPR029057 Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004588|GO:0006221|GO:0009116 G3DSA:3.40.50.2020|MF_01208|PF00156|SSF53271|TIGR00336 CUB95_RS03075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|SSF55961 CUB95_RS03080 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001525|IPR018117|IPR029063 C-5 cytosine methyltransferase|DNA methylase, C-5 cytosine-specific, active site|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168 G3DSA:3.40.50.150|G3DSA:3.90.120.10|PF00145|PR00105|PS00094|SSF53335|TIGR00675 CUB95_RS03085 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019062 Restriction endonuclease, type II, HpaII PF09561 CUB95_RS03090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025636 Protein of unknown function DUF4294 PF14127 CUB95_RS03105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000866|IPR012336|IPR025380 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Domain of unknown function DUF4369|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PF14289|SSF52833 CUB95_RS03110 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000523|IPR001208|IPR004482|IPR014721|IPR020568|IPR025158|IPR027417 MCM domain|Magnesium chelatase ChlI domain|Mg chelatase-related protein|Mg chelatase-related protein, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003677|GO:0005524|GO:0006270 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF01078|PF13335|PF13541|PR01657|SSF52540|SSF54211|TIGR00368 CUB95_RS03115 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006037|IPR006512 Regulator of K+ conductance, C-terminal|YidE/YbjL duplication GO:0006813|GO:0008324 G3DSA:3.30.70.1450|PF02080|PF06826|SSF116726|TIGR01625 CUB95_RS03125 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004993 GH3 family PF03321 CUB95_RS03130 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783|IPR032812 Immunoglobulin-like fold|SbsA, Ig-like domain G3DSA:2.60.40.10|G3DSA:2.60.40.1120|PF13205|SSF49478 CUB95_RS03135 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011579|IPR027417 ATPase domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01637|SSF52540 CUB95_RS03140 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000326|IPR026841 Inositolphosphotransferase Aur1/Ipt1|Phosphatidic acid phosphatase type 2/haloperoxidase PF14378|SSF48317 CUB95_RS03145 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|SSF51735 CUB95_RS03150 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003029|IPR004476|IPR011805|IPR012340|IPR022966|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease II/R, conserved site|Ribonuclease II/ribonuclease R|Ribonuclease R|S1 domain GO:0003676|GO:0003723|GO:0004518|GO:0004540|GO:0016070 G3DSA:2.40.50.140|MF_01895|PF00575|PF00773|PS01175|SM00316|SM00955|SSF50249|TIGR00358|TIGR02063 CUB95_RS03160 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006145|IPR006224|IPR020103 Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.2350.10|PF00849|PS01129|SSF55120 CUB95_RS03165 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021457 Protein of unknown function DUF3108 PF11306 CUB95_RS03170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF14905|SSF56935 CUB95_RS03185 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.20.110.10|SSF82185 CUB95_RS03190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011723 Zinc finger/thioredoxin putative G3DSA:2.20.25.10|TIGR02098 CUB95_RS03200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001107|IPR018649|IPR033880 Band 7 domain|SHOCT domain|SPFH domain, YdjI-like PF09851|PF13421|SSF117892 CUB95_RS03205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004588|IPR013785|IPR017178 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type|Aldolase-type TIM barrel GO:0003824|GO:0005506|GO:0008299|GO:0016114|GO:0046429|GO:0055114 G3DSA:3.20.20.70|MF_00159|PF04551|PIRSF037336|SSF56014|TIGR00612 CUB95_RS03210 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000031|IPR024694|IPR033747 Class I PurE|PurE domain|PurE, prokaryotic type GO:0006189 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|SM01001|SSF52255|TIGR01162 CUB95_RS03215 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10 CUB95_RS03220 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000394|IPR007046|IPR007634|IPR011991 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00718|TIGR02395 CUB95_RS03230 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021255 Putative auto-transporter adhesin, head GIN domain PF10988 CUB95_RS03235 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 CUB95_RS03245 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032205 Protein of unknown function DUF5024 PF16427 CUB95_RS03250 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025671 Protein of unknown function with HXXEE motif PF13787 CUB95_RS03255 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|SSF55729 CUB95_RS03260 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 CUB95_RS03265 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011042|IPR015943|IPR026444 Secretion system C-terminal sorting domain|Six-bladed beta-propeller, TolB-like|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.120.10.30|G3DSA:2.130.10.10|SSF69322|TIGR04183 CUB95_RS03270 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS03275 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002637|IPR020922|IPR029001 Ham1-like protein|Inosine triphosphate pyrophosphatase-like|dITP/XTP pyrophosphatase GO:0009143|GO:0017111|GO:0047429 G3DSA:3.90.950.10|MF_01405|PF01725|SSF52972|TIGR00042 CUB95_RS03280 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003740|IPR019264 Domain of unknown function DUF2179|Uncharacterised membrane protein YitT PF02588|PF10035|PIRSF006483 CUB95_RS03285 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001412|IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR025709 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF13603|PR00985|PS00178|SSF47323|SSF50677|SSF52374|TIGR00396 CUB95_RS03295 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|SSF53756 CUB95_RS03300 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025350 Protein of unknown function DUF4254 PF14063 CUB95_RS03305 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003231|IPR006162|IPR009081|IPR020806 Acyl carrier protein (ACP)|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain GO:0006633|GO:0031177 G3DSA:1.10.1200.10|MF_01217|PD000887|PF00550|PS00012|SM00823|SSF47336|TIGR00517 CUB95_RS03310 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|SM00825|SSF53901|TIGR03150 CUB95_RS03315 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000999|IPR011907|IPR014720 Double-stranded RNA-binding domain|Ribonuclease III|Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396|GO:0016075 G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF14622|PS00517|SM00358|SM00535|SSF54768|SSF69065|TIGR02191 CUB95_RS03320 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain|Domain of unknown function DUF933|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|SSF52540|SSF81271|TIGR00092 CUB95_RS03325 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|TIGR00544 CUB95_RS03335 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000432|IPR005748|IPR007695|IPR007696|IPR007860|IPR007861|IPR016151|IPR017261|IPR027417 DNA mismatch repair protein MutS|DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS, clamp|DNA mismatch repair protein MutS, connector domain|DNA mismatch repair protein MutS, core|DNA mismatch repair protein MutS-like, N-terminal|DNA mismatch repair protein MutS/MSH|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.30.420.110|G3DSA:3.40.1170.10|G3DSA:3.40.50.300|MF_00096|PF00488|PF01624|PF05188|PF05190|PF05192|PIRSF037677|PS00486|SM00533|SM00534|SSF48334|SSF52540|SSF53150|SSF55271|TIGR01070 CUB95_RS03340 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025079 Domain of unknown function DUF3943 PF13084 CUB95_RS03345 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002765|IPR035439 Uncharacterised protein family UPF0145|Uncharacterised protein family UPF0145/C2CD5 G3DSA:3.30.110.70|MF_00338|PF01906|SSF117782 CUB95_RS03350 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009080|IPR014729|IPR015273|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423 G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|SM00840|SSF47323|SSF52374|TIGR00435 CUB95_RS03355 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002638|IPR006406|IPR007229 Nicotinate phosphoribosyltransferase|Nicotinate phosphoribosyltransferase family|Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0004516|GO:0009435|GO:0019357 G3DSA:3.20.140.10|PF04095|PIRSF000484|SSF51690|SSF54675|TIGR01514 CUB95_RS03360 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001537|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.40.1280.10|PF00588|SSF75217 CUB95_RS03365 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003808 Fe-S metabolism associated domain, SufE-like G3DSA:3.90.1010.10|PF02657|SSF82649 CUB95_RS03370 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032808 DoxX family PF07681 CUB95_RS03375 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001539 Peptidase U32 GO:0006508|GO:0008233 G3DSA:3.20.20.150|PF01136 CUB95_RS03380 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001098|IPR002298|IPR002421|IPR002562|IPR008918|IPR012337|IPR018320|IPR020045|IPR020046|IPR029060 3'-5' exonuclease domain|5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN domain-like|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006139|GO:0006260|GO:0006261|GO:0008408 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF01612|PF02739|PR00868|SM00279|SM00474|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593 CUB95_RS03385 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000092|IPR008949|IPR033749 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase, conserved site GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|SSF48576 CUB95_RS03395 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002915|IPR011343|IPR013785 Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase|Deoxyribose-phosphate aldolase GO:0003824|GO:0004139|GO:0005737|GO:0009264|GO:0016829 G3DSA:3.20.20.70|PF01791|PIRSF001357|SM01133|SSF51569|TIGR00126 CUB95_RS03400 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004518|IPR012359 NTP pyrophosphohydrolase MazG, putative catalytic core|NTP pyrophosphohydrolase MazG-related, YpjD G3DSA:1.10.3420.10|PF03819|PIRSF029904|SSF101386 CUB95_RS03405 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003732|IPR023509 D-Tyr tRNAtyr deacylase-like domain|D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 G3DSA:3.50.80.10|MF_00518|PF02580|SSF69500|TIGR00256 CUB95_RS03410 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000305|IPR001162|IPR001943|IPR004791|IPR010994 GIY-YIG nuclease superfamily|RuvA domain 2-like|UVR domain|UvrABC system, subunit C|UvrC family homology region GO:0005515|GO:0005737|GO:0006281|GO:0009380|GO:0009381 G3DSA:1.10.150.20|G3DSA:3.40.1440.10|G3DSA:4.10.860.10|MF_00203|PF01541|PF08459|SM00465|SSF46600|SSF47781|SSF82771|TIGR00194 CUB95_RS03415 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000836|IPR005764|IPR029057 Adenine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0003999|GO:0005737|GO:0006168|GO:0009116 G3DSA:3.40.50.2020|MF_00004|PF00156|SSF53271 CUB95_RS03420 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002218|IPR004416|IPR020595|IPR023753|IPR026904 FAD/NAD(P)-binding domain|GidA associated domain 3|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0002098|GO:0008033|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PS01280|PS01281|SM01228|SSF51905|TIGR00136 CUB95_RS03425 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011138|IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit|Succinate dehydrogenase cytochrome b558 subunit GO:0016020 G3DSA:1.20.1300.10|SSF81343|TIGR02046 CUB95_RS03430 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003953|IPR011280|IPR015939|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|PF00890|PF02910|PR00368|SSF46977|SSF51905|SSF56425|TIGR01811 CUB95_RS03435 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001041|IPR006058|IPR009051|IPR012675|IPR017896|IPR025192 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Beta-grasp domain|Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536|GO:0051537 G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF12838|PF13085|PS00197|SSF46548|SSF54292 CUB95_RS03440 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005077 Peptidase C11, clostripain PF03415 CUB95_RS03445 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001980|IPR004821|IPR014729 Cytidyltransferase-like domain|Phosphopantetheine adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PF01467|PR01020|SSF52374|TIGR00125|TIGR01510 CUB95_RS03450 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002036|IPR023091 Endoribonuclease YbeY|Metalloprotease catalytic domain, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|MF_00009|PF02130|SSF55486|TIGR00043 CUB95_RS03455 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026444|IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like|Secretion system C-terminal sorting domain G3DSA:3.80.10.10|PF13306|SSF52058|TIGR04183 CUB95_RS03480 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PF08843 CUB95_RS03485 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004843|IPR011990|IPR027417|IPR029052 Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like|P-loop containing nucleoside triphosphate hydrolase|Tetratricopeptide-like helical domain GO:0005515|GO:0016787 G3DSA:1.25.40.10|G3DSA:3.40.50.300|G3DSA:3.60.21.10|PF00149|SSF52540|SSF56300 CUB95_RS03495 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS03510 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018534 Tetracycline regulation of excision, RteC PF09357 CUB95_RS03520 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|TIGR00797 CUB95_RS03525 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003313|IPR009057|IPR014710|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeobox domain-like|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|PR00032|SM00342|SSF46689|SSF51215 CUB95_RS03530 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025671 Protein of unknown function with HXXEE motif PF13787 CUB95_RS03535 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023393 START-like domain G3DSA:3.30.530.20|SSF55961 CUB95_RS03540 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|SSF52317 CUB95_RS03545 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014825|IPR016024 Armadillo-type fold|DNA alkylation repair enzyme GO:0005488 G3DSA:1.20.1660.10|G3DSA:1.25.40.290|PF08713|SSF48371 CUB95_RS03550 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PF08843 CUB95_RS03560 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007358 Nucleoid-associated protein NdpA GO:0009295 PF04245 CUB95_RS03570 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.1350.10 CUB95_RS03585 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.40.160.10|SSF56935 CUB95_RS03590 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR033399 Putative outer membrane lipoprotein-sorting protein G3DSA:2.50.20.10|PF17131 CUB95_RS03595 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004869 Membrane transport protein MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|SSF82866 CUB95_RS03600 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 CUB95_RS03605 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 CUB95_RS03610 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001647|IPR009057 DNA-binding HTH domain, TetR-type|Homeobox domain-like GO:0003677 G3DSA:1.10.10.60|PF00440|PR00455|SSF46689 CUB95_RS03620 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:1.10.10.60|PF12728|SSF46955 CUB95_RS03625 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS03650 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|PF13155|SSF56731|SSF57783 CUB95_RS03655 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS03660 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.20.5.780 CUB95_RS03675 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF13180|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 CUB95_RS03680 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001241|IPR002288|IPR003594|IPR006171|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|TOPRIM domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|PF00204|PF00986|PF01751|PF02518|PR00418|PS00177|SM00387|SM00433|SSF54211|SSF55874|SSF56719 CUB95_RS03685 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 CUB95_RS03690 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 CUB95_RS03695 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000755|IPR009045 D-alanyl-D-alanine dipeptidase|Hedgehog signalling/DD-peptidase zinc-binding domain GO:0005618|GO:0006508|GO:0008237|GO:0016805 G3DSA:3.30.1380.10|MF_01924|PF01427|PIRSF026671|SSF55166 CUB95_RS03700 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000866|IPR012336|IPR025380 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Domain of unknown function DUF4369|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PF14289|SSF52833 CUB95_RS03705 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000979|IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like|Phosphodiesterase MJ0936/Vps29 G3DSA:3.60.21.10|PF12850|SSF56300|TIGR00040 CUB95_RS03710 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.120|SSF48452 CUB95_RS03715 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003488|IPR011991 DNA recombination-mediator protein A|Winged helix-turn-helix DNA-binding domain GO:0009294 G3DSA:1.10.10.10|G3DSA:3.40.50.450|PF02481|SSF102405|TIGR00732 CUB95_RS03720 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13279|SSF54637 CUB95_RS03725 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021272 Protein of unknown function DUF2851 PF11013 CUB95_RS03730 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000326|IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel|Phosphatidic acid phosphatase type 2/haloperoxidase GO:0016021 G3DSA:1.20.144.10|G3DSA:2.40.160.20|PF01569|SM00014|SSF48317 CUB95_RS03735 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000846|IPR016040|IPR022663|IPR023940 Dihydrodipicolinate reductase|Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|NAD(P)-binding domain GO:0008839|GO:0009089|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01113|PF05173|PIRSF000161|SSF51735|SSF55347|TIGR00036 CUB95_RS03740 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000223|IPR015927|IPR019758 Peptidase S24/S26A/S26B/S26C|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|PR00727|PS00761|SSF51306 CUB95_RS03745 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014985 WbqC-like protein family PF08889 CUB95_RS03765 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002606|IPR014729|IPR015864|IPR015865|IPR023465 FAD synthetase|Riboflavin kinase domain|Riboflavin kinase domain, bacterial/eukaryotic|Riboflavin kinase, bacterial|Rossmann-like alpha/beta/alpha sandwich fold GO:0003919|GO:0008531|GO:0009231 G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PIRSF004491|SM00904|SSF52374|SSF82114|TIGR00083 CUB95_RS03770 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003675 CAAX amino terminal protease GO:0016020 PF02517 CUB95_RS03775 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 G3DSA:3.75.10.10|PF04371|SSF55909 CUB95_RS03785 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 CUB95_RS03815 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009057|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeobox domain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PS00041|SM00342|SSF46689 CUB95_RS03820 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009057|IPR011990|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeobox domain-like|Tetratricopeptide-like helical domain GO:0003677|GO:0003700|GO:0005515|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.150.200|G3DSA:1.25.40.10|PF12833|PS00041|SM00342|SSF46689|SSF48452 CUB95_RS03825 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000713|IPR004101|IPR005863|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0009058|GO:0016874|GO:0047480|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_02019|PF01225|PF02875|PF08245|SSF53244|SSF53623|SSF63418|TIGR01143 CUB95_RS03830 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0000175|GO:0003676|GO:0003723|GO:0004654|GO:0006396|GO:0006402 G3DSA:1.10.10.400|G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|SM00316|SM00322|SSF46915|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591 CUB95_RS03835 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001757|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299|IPR027256 HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829 G3DSA:1.20.1110.10|G3DSA:3.40.1110.10|PF00122|PF00702|PR00119|PR00120|PS00154|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01525 CUB95_RS03840 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003740|IPR019264 Domain of unknown function DUF2179|Uncharacterised membrane protein YitT PF02588|PF10035|PIRSF006483 CUB95_RS03845 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001269|IPR004652|IPR013785|IPR018517|IPR024036 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, TIM-barrel, NifR3|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine synthase, putative, C-terminal GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.10.1200.80|G3DSA:3.20.20.70|PF01207|PIRSF006621|PS01136|SSF51395|TIGR00737 CUB95_RS03850 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003593|IPR004605|IPR008823|IPR008824|IPR011991|IPR027417 AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|SM00382|SSF46785|SSF52540|TIGR00635 CUB95_RS03855 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025348 Protein of unknown function DUF4252 PF14060 CUB95_RS03860 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025348 Protein of unknown function DUF4252 PF14060 CUB95_RS03865 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 CUB95_RS03875 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025348 Protein of unknown function DUF4252 PF14060 CUB95_RS03880 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003601|IPR003602|IPR005733|IPR006171|IPR013497|IPR013825|IPR023405|IPR023406|IPR025589|IPR028612 DNA topoisomerase I, bacterial-type|DNA topoisomerase I, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|TOPRIM domain|Topoisomerase C-terminal repeat GO:0003677|GO:0003916|GO:0003917|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.40.50.140|MF_00952|PF01131|PF01751|PF13368|PR00417|PS00396|SM00436|SM00437|SM00493|SSF56712|TIGR01051 CUB95_RS03885 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000623|IPR027417|IPR031322 P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase G3DSA:3.40.50.300|MF_00109|PF01202|PR01100|SSF52540 CUB95_RS03890 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000183|IPR002985|IPR009006|IPR022644|IPR022653|IPR022657|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Arginine decarboxylase|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, conserved site|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0006527|GO:0008295|GO:0008792 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01417|PF02784|PIRSF001336|PR01179|PR01180|PS00878|PS00879|SSF51419|TIGR01273 CUB95_RS03895 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 CUB95_RS03910 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001405|IPR020891|IPR025657 RadC protein|RadC-like JAB domain|Uncharacterised protein family UPF0758, conserved site G3DSA:3.40.140.10|PF04002|PS01302|TIGR00608 CUB95_RS03915 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS03920 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 CUB95_RS03925 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000271|IPR020939 Ribosomal protein L34|Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00391|PD003101|PF00468|PS00784|TIGR01030 CUB95_RS03930 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005543 PASTA domain PF03793|SM00740|SSF54184 CUB95_RS03935 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|G3DSA:3.30.2350.10|PF00849|PF01479|PS01129|SM00363|SSF55120|SSF55174|TIGR00005 CUB95_RS03940 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PIRSF039102|PS00843|SSF52440|SSF56059|TIGR01205 CUB95_RS03945 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|SSF69593 CUB95_RS03950 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR035376 NigD-like, C-terminal beta sandwich domain PF17415 CUB95_RS03960 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704 CUB95_RS03965 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000238|IPR015946|IPR023799 K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain GO:0006364 G3DSA:3.30.300.20|PD007327|PF02033|SSF89919|TIGR00082 CUB95_RS03970 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF13304|SM00382|SSF52540 CUB95_RS03975 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR029492 Domain of unknown function DUF4435 PF14491 CUB95_RS03980 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003445|IPR004772 Cation transporter|TrkH potassium transport family GO:0006812|GO:0008324|GO:0016021|GO:0022820|GO:0055085|GO:0071805 PF02386|PIRSF006247 CUB95_RS03985 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003148|IPR006036|IPR006037|IPR016040 NAD(P)-binding domain|Potassium uptake protein TrkA|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, N-terminal GO:0005886|GO:0006813|GO:0008324|GO:0015079 G3DSA:3.30.70.1450|G3DSA:3.40.50.720|PF02080|PF02254|PR00335|SSF116726|SSF51735 CUB95_RS03990 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005475|IPR005477|IPR009014|IPR020826|IPR029061|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00802|SM00861|SSF52518|SSF52922|TIGR00204 CUB95_RS04000 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032293 Protein of unknown function DUF4840 PF16128 CUB95_RS04005 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006214 Bax inhibitor 1-related PF01027 CUB95_RS04055 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000200|IPR013783|IPR025896 Immunoglobulin-like fold|Peptidase C10, streptopain|Spi protease inhibitor GO:0006508|GO:0008234 G3DSA:2.60.40.10|G3DSA:3.90.70.10|PD004169|PF01640|PF13734|PR00797|SSF54001 CUB95_RS04060 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783|IPR021615 Immunoglobulin-like fold|Outer membrane protein Omp28 G3DSA:2.60.40.10|G3DSA:3.40.30.10|PF11551 CUB95_RS04065 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 CUB95_RS04070 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.40.160.10 CUB95_RS04075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012336|IPR013783|IPR021615 Immunoglobulin-like fold|Outer membrane protein Omp28|Thioredoxin-like fold G3DSA:2.60.40.10|G3DSA:3.40.30.10|PF11551|SSF52833 CUB95_RS04085 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|SSF55811 CUB95_RS04090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001375|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 G3DSA:3.40.50.1820|PF00326|SSF53474 CUB95_RS04095 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20 CUB95_RS04105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.40.50.260|G3DSA:3.55.50.10|PF05954|SSF69255|SSF69279 CUB95_RS04115 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025460 Protein of unknown function DUF4280 PF14107 CUB95_RS04135 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001757|IPR004014|IPR006068|IPR006408|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IIB GO:0000166|GO:0005388|GO:0005524|GO:0016020|GO:0016021|GO:0070588 G3DSA:1.20.1110.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR00119|PS00154|SM00831|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494|TIGR01517 CUB95_RS04140 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003728|IPR028989|IPR028998 Ribosome maturation factor RimP|Ribosome maturation factor RimP, C-terminal|Ribosome maturation factor RimP, N-terminal GO:0042274 G3DSA:2.30.30.180|G3DSA:3.30.300.70|MF_01077|PF02576|PF17384|SSF75420 CUB95_RS04145 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003029|IPR009019|IPR010213|IPR012340|IPR013735|IPR015946|IPR022967|IPR025249|IPR030842 K homology domain, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|S1 domain|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination/antitermination protein NusA, bacterial GO:0003676|GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF00575|PF08529|PF13184|SM00316|SSF50249|SSF54814|SSF69705|TIGR01953 CUB95_RS04150 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000178|IPR000795|IPR005225|IPR006847|IPR009000|IPR023115|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain GO:0003743|GO:0003924|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.30.56.50|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF04760|PF11987|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 CUB95_RS04155 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000825|IPR010231 SUF system FeS cluster assembly, SufB|SUF system FeS cluster assembly, SufBD GO:0016226 PF01458|SSF101960|TIGR01980 CUB95_RS04165 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR010230|IPR027417 ABC transporter-like|FeS cluster assembly SUF system, ATPase SufC|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016887 G3DSA:3.40.50.300|PF00005|SSF52540|TIGR01978 CUB95_RS04170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000825|IPR011542 SUF system FeS cluster assembly, SufBD|SUF system FeS cluster assembly, SufD GO:0016226 PF01458|SSF101960|TIGR01981 CUB95_RS04175 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000192|IPR010970|IPR015421|IPR015422|IPR015424|IPR016454 Aminotransferase class V domain|Cysteine desulfurase|Cysteine desulfurase, SufS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0006534|GO:0030170|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|SSF53383|TIGR01979 CUB95_RS04190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012337|IPR022898|IPR024567 Ribonuclease H-like domain|Ribonuclease HII|Ribonuclease HII/HIII domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00052_B|PF01351|SSF53098 CUB95_RS04195 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011991|IPR026881 WYL domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13280 CUB95_RS04200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910|IPR023996|IPR023997 Carboxypeptidase-like, regulatory domain|TonB-dependent outer membrane protein SusC/RagA, conserved site|TonB-dependent outer membrane protein, SusC/RagA|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF07715|PF13715|SSF49464|SSF56935|TIGR04056|TIGR04057 CUB95_RS04205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR012944|IPR033985 RagB/SusD domain|SusD-like, N-terminal|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF07980|PF14322|SSF48452 CUB95_RS04210 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008979|IPR013783 Galactose-binding domain-like|Immunoglobulin-like fold G3DSA:2.60.120.260|G3DSA:2.60.40.10 CUB95_RS04215 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008979 Galactose-binding domain-like G3DSA:2.60.120.260|G3DSA:2.60.40.1180 CUB95_RS04220 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000209|IPR015500|IPR023828|IPR026444 Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain|Secretion system C-terminal sorting domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|PR00723|PS00138|SSF52743|TIGR04183 CUB95_RS04225 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032675 Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|SSF52058 CUB95_RS04240 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF13180|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 CUB95_RS04250 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008631 Glycogen synthase GO:0004373|GO:0005978 G3DSA:3.40.50.2000|PF05693|SSF53756 CUB95_RS04255 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000811|IPR011834|IPR024517 Alpha-glucan phosphorylase|Glycogen phosphorylase, domain of unknown function DUF3417|Glycosyl transferase, family 35 GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PF11897|PIRSF000460|SSF53756|TIGR02094 CUB95_RS04260 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF14905|SSF49464|SSF56935 CUB95_RS04265 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011050|IPR012334 Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|SSF51126 CUB95_RS04270 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002125|IPR006262|IPR016192|IPR016193 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminase domain|Cytidine deaminase, homotetrameric|Cytidine deaminase-like GO:0003824|GO:0004126|GO:0008270|GO:0009972|GO:0016787 G3DSA:3.40.140.10|PF00383|PS00903|SSF53927|TIGR01354 CUB95_RS04275 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025346 Protein of unknown function DUF4250 PF14056 CUB95_RS04290 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005995|IPR006124|IPR011258|IPR017850 Alkaline-phosphatase-like, core domain|BPG-independent PGAM, N-terminal|Metalloenzyme|Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0003824|GO:0004619|GO:0005737|GO:0006007|GO:0008152|GO:0030145|GO:0046872 G3DSA:3.20.20.140|G3DSA:3.40.1450.10|MF_01038|PF01676|PF06415|PIRSF001492|SSF53649|SSF64158|TIGR01307 CUB95_RS04295 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002043|IPR005122|IPR018085 Uracil-DNA glycosylase family 1|Uracil-DNA glycosylase, active site|Uracil-DNA glycosylase-like GO:0004844|GO:0006281|GO:0006284|GO:0016799 G3DSA:3.40.470.10|MF_00148|PF03167|PS00130|SM00986|SM00987|SSF52141|TIGR00628 CUB95_RS04300 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002043|IPR005122|IPR018085 Uracil-DNA glycosylase family 1|Uracil-DNA glycosylase, active site|Uracil-DNA glycosylase-like GO:0004844|GO:0006281|GO:0006284|GO:0016799 G3DSA:3.40.470.10|MF_00148|PF03167|PS00130|SM00986|SM00987|SSF52141|TIGR00628 CUB95_RS04305 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021458 Protein of unknown function DUF3109 PF11307 CUB95_RS04310 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250|IPR025665 Outer membrane protein beta-barrel domain|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.128.100|PF13568|SSF56925 CUB95_RS04315 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 CUB95_RS04320 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024299|IPR035376 NigD-like N-terminal OB domain|NigD-like, C-terminal beta sandwich domain PF12667|PF17415 CUB95_RS04325 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003717|IPR012340|IPR022572 DNA replication/recombination mediator RecO, N-terminal|Nucleic acid-binding, OB-fold|Recombination protein O, RecO GO:0006281|GO:0006310 G3DSA:2.40.50.140|MF_00201|PF02565|PF11967|SSF50249|SSF57863|TIGR00613 CUB95_RS04335 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|SSF46992|TIGR00029 CUB95_RS04345 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|TOPRIM domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 CUB95_RS04350 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeobox domain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|SM00342|SSF46689 CUB95_RS04355 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001431|IPR007863|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|SSF63411 CUB95_RS04365 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008146|IPR014746|IPR022147|IPR027303 Glutamine synthetase type III N-terminal|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0006807 G3DSA:3.30.590.10|PF00120|PF12437|PS00181|SM01230|SSF55931 CUB95_RS04370 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13444|SSF55729 CUB95_RS04375 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.1130.10|SSF69593 CUB95_RS04380 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003444|IPR020603 MraZ domain|Transcriptional regulator MraZ GO:0003700|GO:0006355 G3DSA:2.10.260.10|MF_01008|PD006745|PF02381|SSF89447 CUB95_RS04385 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 G3DSA:1.10.150.170|MF_01007|PF01795|PIRSF004486|SSF53335|SSF81799|TIGR00006 CUB95_RS04395 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001460|IPR005311|IPR005543|IPR012338 Beta-lactamase/transpeptidase-like|PASTA domain|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PF03793|SSF54184|SSF56519|SSF56601 CUB95_RS04400 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000713|IPR004101|IPR005761|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0016874|GO:0016881|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|PF01225|PF02875|PF08245|SSF53244|SSF53623|SSF63418|TIGR01085 CUB95_RS04405 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000715|IPR003524|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016020|GO:0016021 MF_00038|PF00953|PS01347|PS01348 CUB95_RS04410 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004101|IPR005762|IPR013221 Mur ligase, C-terminal|Mur ligase, central|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0016874|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|SSF51984|SSF53244|SSF53623|TIGR01087 CUB95_RS04415 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 PF01098 CUB95_RS04420 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0009252|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|SSF53756|TIGR01133 CUB95_RS04425 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000713|IPR004101|IPR005758|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramate--L-alanine ligase GO:0005524|GO:0008763|GO:0009058|GO:0009252|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|PF01225|PF02875|PF08245|SSF51984|SSF53244|SSF53623|TIGR01082 CUB95_RS04430 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018247 EF-Hand 1, calcium-binding site PS00018 CUB95_RS04435 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003494|IPR020823 Cell division protein FtsA|SHS2 domain inserted in FtsA GO:0005515|GO:0007049 G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_02033|PF02491|PF14450|PIRSF003101|SM00842|SSF53067|TIGR01174 CUB95_RS04440 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000158|IPR003008|IPR008280|IPR018316|IPR020805|IPR024757 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Cell division protein FtsZ, conserved site|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain GO:0003924|GO:0005525|GO:0005737 G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PS01135|SM00864|SM00865|SSF52490|SSF55307|TIGR00065 CUB95_RS04455 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001584|IPR009057|IPR011991|IPR012337|IPR025246 Homeobox domain-like|Integrase, catalytic core|Ribonuclease H-like domain|Transposase IS30-like HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PF13936|SSF46689|SSF53098 CUB95_RS04465 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001272|IPR008210|IPR013035|IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site|Phosphoenolpyruvate carboxykinase, ATP-utilising|Phosphoenolpyruvate carboxykinase, C-terminal|Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0004612|GO:0005524|GO:0006094|GO:0017076 G3DSA:3.40.449.10|G3DSA:3.90.228.20|MF_00453|PF01293|PIRSF006294|PS00532|SSF53795|SSF68923|TIGR00224 CUB95_RS04470 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR029057 Phosphoribosyltransferase-like G3DSA:3.40.50.2020|PF14681|SSF53271 CUB95_RS04485 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006665 OmpA-like domain G3DSA:1.10.287.620|G3DSA:3.30.1330.60|PF00691|SSF103088 CUB95_RS04500 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS04505 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 CUB95_RS04515 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003593|IPR010285|IPR027417|IPR027785|IPR029491 AAA+ ATPase domain|DNA helicase Pif1-like|Helicase Helix-turn-helix domain|P-loop containing nucleoside triphosphate hydrolase|UvrD-like helicase C-terminal domain GO:0000723|GO:0003678|GO:0006281 G3DSA:1.10.10.60|G3DSA:3.40.50.300|PF05970|PF13538|PF14493|SM00382|SSF52540 CUB95_RS04520 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002560|IPR029261|IPR032877 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain|Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PF01610|PF13542|PF14690 CUB95_RS04530 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003370 Chromate transporter GO:0015109|GO:0015703 PF02417 CUB95_RS04535 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003370 Chromate transporter GO:0015109|GO:0015703 PF02417 CUB95_RS04540 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010073|IPR010918|IPR016188|IPR029062 AIR synthase-related protein, C-terminal domain|Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase|PurM-like, N-terminal domain GO:0004642|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.40.50.880|G3DSA:3.90.650.10|MF_00419|PF02769|PF13507|SM01211|SSF109736|SSF52317|SSF55326|SSF56042|SSF82697 CUB95_RS04555 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005229|IPR013527|IPR013551 Conserved hypothetical protein CHP00255|Domain of unknown function DUF1732|YicC-like, N-terminal PF03755|PF08340|TIGR00255 CUB95_RS04560 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008145|IPR017665|IPR020590|IPR027417 Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0004385|GO:0006163 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00625|PS00856|SM00072|SSF52540|TIGR03263 CUB95_RS04565 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Nicotinate/nicotinamide nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|SSF52374|TIGR00125|TIGR00482 CUB95_RS04570 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PF13440|PF14667 CUB95_RS04575 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS04590 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007267|IPR023214 GtrA-like protein|HAD-like domain GO:0000271|GO:0006810|GO:0016021 G3DSA:3.40.50.1000|PF04138|PF12710|SSF56784|TIGR01488 CUB95_RS04595 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 PF01040 CUB95_RS04600 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 CUB95_RS04605 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 CUB95_RS04610 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|SSF53649 CUB95_RS04615 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001584|IPR009057|IPR011991|IPR012337|IPR025246 Homeobox domain-like|Integrase, catalytic core|Ribonuclease H-like domain|Transposase IS30-like HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PF13936|SSF46689|SSF53098 CUB95_RS04620 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019199|IPR021127 CRISPR-associated endonuclease Cas2|Virulence-associated protein D / CRISPR associated protein Cas2 GO:0004521|GO:0043571 G3DSA:3.30.70.240|MF_01471|PF09827|SSF143430|TIGR01573 CUB95_RS04625 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002729|IPR019855 CRISPR-associated protein Cas1|CRISPR-associated protein Cas1, NMENI subtype GO:0003676|GO:0004519|GO:0004520|GO:0043571|GO:0046872|GO:0051607 MF_01470|PF01867|TIGR00287|TIGR03639 CUB95_RS04630 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003615|IPR012337|IPR028629 CRISPR-associated endonuclease Cas9|HNH nuclease|Ribonuclease H-like domain GO:0003676|GO:0004519 G3DSA:3.30.420.10|MF_01480|PF13395|TIGR01865 CUB95_RS04645 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025420|IPR027417 Domain of unknown function DUF4143|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.1350.10|G3DSA:3.40.50.300|PF13173|PF13635|SSF52540 CUB95_RS04650 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000362|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0006099|GO:0016829 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10415|PR00149|PS00163|SSF48557 CUB95_RS04655 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010870 Phosphate-selective porin O/P G3DSA:2.40.160.10|PF07396|SSF56935 CUB95_RS04660 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004550|IPR006034|IPR020827|IPR027473|IPR027474|IPR027475 Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|Asparaginase/glutaminase-like|L-asparaginase, C-terminal domain|L-asparaginase, N-terminal|L-asparaginase, type II GO:0004067|GO:0006520|GO:0006528 G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PIRSF500176|PR00139|PS00144|PS00917|SM00870|SSF53774|TIGR00520 CUB95_RS04665 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 PF03605|PIRSF004539|TIGR00770 CUB95_RS04670 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|SSF52833 CUB95_RS04675 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014127 Conserved hypothetical protein CHP02757 PF09674|TIGR02757 CUB95_RS04680 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|SSF49464|SSF56935 CUB95_RS04685 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005901 GLPGLI family protein PF09697|TIGR01200 CUB95_RS04690 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011055|IPR016047|IPR018392 Duplicated hybrid motif|LysM domain|Peptidase M23 G3DSA:2.70.70.10|G3DSA:3.10.350.10|PF01476|PF01551|SM00257|SSF51261|SSF54106 CUB95_RS04695 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001650|IPR004609|IPR011545|IPR012340|IPR014001|IPR027417|IPR033454 ATP-dependent DNA helicase RecG|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|RecG, wedge domain GO:0003676|GO:0004003|GO:0005524|GO:0006281|GO:0006310 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00270|PF00271|PF17191|SM00487|SM00490|SSF50249|SSF52540|TIGR00643 CUB95_RS04700 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001228|IPR029044|IPR034683 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|Cytidylyltransferase IspD/TarI|Nucleotide-diphospho-sugar transferases GO:0008299|GO:0050518|GO:0070567 G3DSA:3.90.550.10|MF_00108|PF01128|SSF53448|TIGR00453 CUB95_RS04705 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002818|IPR006287|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|Protein DJ-1 G3DSA:3.40.50.880|PF01965|SSF52317|TIGR01383 CUB95_RS04710 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, all-beta|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0006741|GO:0008152|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|SSF111331 CUB95_RS04715 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR011527|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|SM00382|SSF52540|SSF90123 CUB95_RS04720 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.30.1150.10|G3DSA:3.40.30.10|PF00578|SSF52833 CUB95_RS04730 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:1.20.1170.10|G3DSA:2.130.10.10|SSF63829 CUB95_RS04735 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000326|IPR001011|IPR011158|IPR018296 Acid phosphatase, class A, bacterial|Acid phosphatase, class A, bacterial, conserved site|Nonspecific acid phosphatase, class A|Phosphatidic acid phosphatase type 2/haloperoxidase GO:0003993|GO:0030288 G3DSA:1.20.144.10|PF01569|PIRSF000897|PR00483|PS01157|SM00014|SSF48317 CUB95_RS04740 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010870 Phosphate-selective porin O/P G3DSA:2.40.160.10|PF07396|SSF56935 CUB95_RS04750 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.10.287.1110|G3DSA:1.20.58.280|G3DSA:1.25.40.10|PD102047|PF06552|PF13289|PF13374|SSF48439|SSF48452 CUB95_RS04755 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR020846 Major facilitator superfamily domain G3DSA:1.20.1250.20|PF13347|SSF103473 CUB95_RS04760 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000843|IPR010982|IPR011991|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|SM00354|SSF47413|SSF53822 CUB95_RS04765 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910|IPR023996|IPR023997 Carboxypeptidase-like, regulatory domain|TonB-dependent outer membrane protein SusC/RagA, conserved site|TonB-dependent outer membrane protein, SusC/RagA|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF07715|PF13715|SSF49464|SSF56935|TIGR04056|TIGR04057 CUB95_RS04770 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR012944|IPR033985 RagB/SusD domain|SusD-like, N-terminal|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF07980|PF14322|SSF48452 CUB95_RS04775 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783|IPR025970|IPR032187 Immunoglobulin-like fold|Outer membrane protein SusF/SusE|SusE outer membrane protein GO:0019867|GO:2001070 G3DSA:2.60.40.10|PF14292|PF16411 CUB95_RS04780 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783|IPR033408 Domain of unknown function DUF5115|Immunoglobulin-like fold G3DSA:2.60.40.10|PF17142 CUB95_RS04785 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006046|IPR006047|IPR013783|IPR017853 Alpha amylase|Glycoside hydrolase superfamily|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin-like fold GO:0003824|GO:0005975|GO:0043169 G3DSA:2.60.40.10|G3DSA:3.20.20.80|PF00128|PF13290|PR00110|SM00642|SSF51445 CUB95_RS04795 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250|IPR025079 Domain of unknown function DUF3943|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13084 CUB95_RS04800 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005822|IPR005823 Ribosomal protein L13|Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|SSF52161|TIGR01066 CUB95_RS04805 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|SSF54211 CUB95_RS04810 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00963|SSF52313|TIGR01011 CUB95_RS04815 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001816|IPR009060|IPR014039|IPR018101 Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01126|PS01127|SSF46934|SSF54713|TIGR00116 CUB95_RS04825 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 CUB95_RS04830 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001769|IPR008979|IPR029030|IPR029031 Caspase-like domain|Galactose-binding domain-like|Gingipain|Gingipain, N-terminal GO:0006508|GO:0008234 G3DSA:2.60.120.260|G3DSA:2.60.40.1310|G3DSA:3.40.50.10390|G3DSA:3.40.50.1460|PF01364|SSF52129 CUB95_RS04835 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.40.160.60|SSF56935 CUB95_RS04840 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003526|IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685|GO:0016114 G3DSA:3.30.1330.50|MF_00107|PF02542|PS01350|SSF69765|TIGR00151 CUB95_RS04850 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000859|IPR006626|IPR011050|IPR012334|IPR026444|IPR027828|IPR029456 CUB domain|Parallel beta-helix repeat|Pectin lyase fold|Pectin lyase fold/virulence factor|Protein of unknown function DUF4465|Secretion system C-terminal sorting domain|Sialidase, N-terminal G3DSA:2.160.20.10|G3DSA:2.60.120.290|G3DSA:2.60.40.1180|PF14717|PF14873|SM00710|SSF51126|TIGR04183 CUB95_RS04860 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 CUB95_RS04865 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018294|IPR029044|IPR034683 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site|Cytidylyltransferase IspD/TarI|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0008299|GO:0070567 G3DSA:3.90.550.10|PF01128|PS01295|SSF53448 CUB95_RS04870 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007074 LicD family PF04991 CUB95_RS04875 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001478|IPR004387|IPR008915 PDZ domain|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0005515|GO:0006508|GO:0016021 G3DSA:2.30.42.10|PF02163|SSF50156|TIGR00054 CUB95_RS04880 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003821|IPR013512|IPR013644|IPR016040|IPR026877 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|NAD(P)-binding domain GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|SSF51735|SSF55347|SSF69055|TIGR00243 CUB95_RS04885 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002676|IPR009000|IPR011033|IPR011961 16S rRNA processing protein RimM|PRC-barrel-like|RimM protein|Translation protein, beta-barrel domain GO:0005840|GO:0006364|GO:0043022 G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|SSF50346|SSF50447|TIGR02273 CUB95_RS04890 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001986|IPR005750|IPR013792 Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|MF_00111|PF00275|SSF55205|TIGR01072 CUB95_RS04895 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025632 Protein of unknown function DUF4290 PF14123 CUB95_RS04900 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000905|IPR022496 Gcp-like domain|tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 G3DSA:3.30.420.40|PF00814|SSF53067|TIGR03725 CUB95_RS04915 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006047|IPR013783|IPR014756|IPR015171|IPR017853|IPR019492 Cyclo-malto-dextrinase, C-terminal|Cyclomaltodextrinase, N-terminal|Glycoside hydrolase superfamily|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0005975 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF09087|PF10438|SM00642|SSF51011|SSF51445|SSF81296 CUB95_RS04920 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006047|IPR011840|IPR013783|IPR014756|IPR017853 Glycoside hydrolase superfamily|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold|Pullulanase, type I GO:0003824|GO:0005975 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|SM00642|SSF51445|SSF81296|TIGR02104 CUB95_RS04925 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013785|IPR014718|IPR017853|IPR019563|IPR029483|IPR029486 Aldolase-type TIM barrel|Glycoside hydrolase superfamily|Glycoside hydrolase-type carbohydrate-binding|Glycosyl-hydrolase 97, C-terminal oligomerisation domain|Glycosyl-hydrolase 97, N-terminal domain|Glycosyl-hydrolase 97, catalytic domain GO:0003824|GO:0030246 G3DSA:2.60.40.1180|G3DSA:2.70.98.10|G3DSA:3.20.20.70|PF10566|PF14508|PF14509|SSF51445 CUB95_RS04930 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002044|IPR003385|IPR013783|IPR013784|IPR017853 Carbohydrate binding module family 20|Carbohydrate-binding-like fold|Glycoside hydrolase superfamily|Glycoside hydrolase, family 77|Immunoglobulin-like fold GO:0004134|GO:0005975|GO:0030246|GO:2001070 G3DSA:2.60.40.10|G3DSA:3.20.20.80|PF00686|PF02446|SM01065|SSF49452|SSF51445 CUB95_RS04935 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004792|IPR023166|IPR023753 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like|FAD/NAD(P)-binding domain|HI0933 insert-like domain GO:0016491|GO:0055114 G3DSA:1.10.8.260|G3DSA:2.40.30.10|G3DSA:3.50.50.60|PF03486|PR00368|PR00411|SSF160996|SSF51905|TIGR00275 CUB95_RS04940 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011611|IPR029056 Carbohydrate kinase PfkB|Ribokinase-like G3DSA:3.40.1190.20|PF00294|SSF53613 CUB95_RS04945 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 CUB95_RS04950 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001362|IPR013148|IPR013189|IPR013320|IPR018053|IPR023296|IPR032313 Concanavalin A-like lectin/glucanase domain|Domain of unknown function DUF4980|Glycoside hydrolase, family 32|Glycoside hydrolase, family 32, active site|Glycosyl hydrolase family 32, C-terminal|Glycosyl hydrolase family 32, N-terminal|Glycosyl hydrolase, five-bladed beta-propellor domain GO:0004553|GO:0005975 G3DSA:2.115.10.20|G3DSA:2.60.120.560|PF00251|PF08244|PF16352|PS00609|SM00640|SSF49899|SSF75005 CUB95_RS04955 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|SSF56935 CUB95_RS04960 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR009057|IPR011006|IPR018060|IPR025997|IPR028082 CheY-like superfamily|DNA binding HTH domain, AraC-type|Histidine kinase-like ATPase, C-terminal domain|Homeobox domain-like|Periplasmic binding protein|Periplasmic binding protein-like I|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0003677|GO:0003700|GO:0006355|GO:0007165|GO:0016310|GO:0016772|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF12833|PF13407|PR00344|SM00342|SM00387|SM00388|SM00448|SSF46689|SSF47384|SSF52172|SSF53822|SSF55874 CUB95_RS04970 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10 CUB95_RS04975 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 CUB95_RS04990 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 G3DSA:2.60.40.730|PF01880|SSF49367|TIGR00332 CUB95_RS05025 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.50.300 CUB95_RS05035 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002645|IPR011547 SLC26A/SulP transporter domain|STAS domain GO:0008272|GO:0015116|GO:0016021 G3DSA:3.30.750.24|PF00916|PF01740|SSF52091 CUB95_RS05040 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000119|IPR010992|IPR011991 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|G3DSA:4.10.520.10|PF00216|SSF46785|SSF47729 CUB95_RS05045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0015969 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|SM00471|SM00954|SSF109604|SSF81271|SSF81301|TIGR00691 CUB95_RS05050 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000189|IPR008258|IPR023346 Lysozyme-like domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|PF01464|PS00922|SSF53955 CUB95_RS05060 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003115|IPR004437 ParB/RepB/Spo0J partition protein family|ParB/Sulfiredoxin GO:0003677 G3DSA:1.10.10.730|G3DSA:3.30.1190.10|G3DSA:3.90.1530.10|PF02195|SM00470|SSF109709|SSF110849|TIGR00180 CUB95_RS05065 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PIRSF009320|SSF52540 CUB95_RS05070 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002828|IPR030048 Survival protein SurE|Survival protein SurE-like phosphatase/nucleotidase GO:0008252|GO:0016787 G3DSA:3.40.1210.10|MF_00060|PF01975|SSF64167|TIGR00087 CUB95_RS05075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 G3DSA:3.40.50.2000|PF02684|SSF53756|TIGR00215 CUB95_RS05080 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032816 SNARE associated Golgi protein PF09335 CUB95_RS05085 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|TIGR00797 CUB95_RS05090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain G3DSA:3.10.50.40|PF00254|SSF54534 CUB95_RS05095 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002314|IPR002315|IPR004154|IPR022961 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Glycine-tRNA ligase, bacterial|Glycyl-tRNA synthetase GO:0000166|GO:0004812|GO:0004820|GO:0005524|GO:0005737|GO:0006418|GO:0006426 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00253_B|PF00587|PF03129|PR01043|SSF52954|SSF55681|TIGR00389 CUB95_RS05105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002205|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 G3DSA:3.30.1360.40|G3DSA:3.90.199.10|PF00521|SM00434|SSF56719 CUB95_RS05110 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016879 Uncharacterised conserved protein UCP028299 PF11777 CUB95_RS05115 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005151|IPR028204|IPR029045 ClpP/crotonase-like domain|Tail specific protease|Tricorn protease C1 domain GO:0006508|GO:0008236 G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF14684|SM00245|SSF52096 CUB95_RS05125 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000559|IPR020628|IPR027417 Formate-tetrahydrofolate ligase, FTHFS|Formate-tetrahydrofolate ligase, FTHFS, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0004329|GO:0005524 G3DSA:3.10.410.10|G3DSA:3.40.50.300|MF_01543|PF01268|PS00721|PS00722|SSF52540 CUB95_RS05130 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005215|IPR008880|IPR008881|IPR027304 Trigger factor|Trigger factor, C-terminal|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.30.70.1050|PF05697|PF05698|PIRSF003095|SSF102735|SSF109998|TIGR00115 CUB95_RS05135 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001907|IPR023562|IPR029045|IPR033135 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, histidine active site|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00382|SSF52096 CUB95_RS05140 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003593|IPR003959|IPR004487|IPR010603|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type GO:0005524|GO:0006457|GO:0008270|GO:0046983|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382 CUB95_RS05145 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001650|IPR002121|IPR004589|IPR006293|IPR010997|IPR011545|IPR011991|IPR014001|IPR018982|IPR027417|IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain|DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|DNA helicase, ATP-dependent, RecQ type, bacterial|HRDC domain|HRDC-like|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RQC domain|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003676|GO:0003824|GO:0004003|GO:0005524|GO:0005622|GO:0006260|GO:0006281|GO:0006310|GO:0008026|GO:0009432|GO:0043140|GO:0044237 G3DSA:1.10.10.10|G3DSA:1.10.150.80|G3DSA:3.40.50.300|PF00270|PF00271|PF00570|PF09382|PF16124|SM00341|SM00487|SM00490|SM00956|SSF46785|SSF47819|SSF52540|TIGR00614|TIGR01389 CUB95_RS05160 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000644|IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|CBS domain|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01964|PF00478|PF00571|PIRSF000130|PS00487|SM00116|SM01240|SSF51412|SSF54631|TIGR01302 CUB95_RS05165 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027304 Trigger factor/SurA domain G3DSA:3.10.50.40|PF13616|SSF109998|SSF54534 CUB95_RS05170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000297|IPR023058|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site|Trigger factor/SurA domain GO:0016853 G3DSA:1.10.4030.10|G3DSA:3.10.50.40|PF00639|PS01096|SSF109998|SSF54534 CUB95_RS05175 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005653 Organic solvent tolerance-like, N-terminal G3DSA:2.60.450.10|PF13100 CUB95_RS05185 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002099|IPR003594|IPR013507|IPR014721|IPR014762|IPR014790|IPR020568|IPR020667 DNA mismatch repair protein family|DNA mismatch repair protein, C-terminal|DNA mismatch repair protein, MutL|DNA mismatch repair, conserved site|Histidine kinase-like ATPase, C-terminal domain|MutL, C-terminal, dimerisation|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0006298|GO:0030983 G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00149|PF01119|PF08676|PF13589|PS00058|SM00853|SM01340|SSF118116|SSF54211|SSF55874|TIGR00585 CUB95_RS05190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006665|IPR011250 OmpA-like domain|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|G3DSA:3.30.1330.60|PF00691|SSF103088 CUB95_RS05195 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010992|IPR011991 Integration host factor (IHF)-like DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|G3DSA:4.10.520.10|PF14848|SSF47729 CUB95_RS05200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR017871|IPR022374|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, ATP-binding protein, ChvD|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|SM00382|SSF52540|TIGR03719 CUB95_RS05205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR027417|IPR030921 AAA+ ATPase domain|ABC transporter-like|LPS export ABC transporter, ATP-binding protein LptB|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0043190|GO:0055085 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540|TIGR04406 CUB95_RS05210 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PF02405 CUB95_RS05215 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 CUB95_RS05225 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005225|IPR006073|IPR015946|IPR016484|IPR027417|IPR032859 GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:1.20.120.430|G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PF14714|PIRSF006485|PR00326|SSF52540|TIGR00231|TIGR03594 CUB95_RS05230 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417 GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0003723|GO:0005525|GO:0005622 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|SSF52540|SSF54814|TIGR00231|TIGR00436 CUB95_RS05235 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|SSF53901|TIGR00747 CUB95_RS05240 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002677|IPR011332 Ribosomal protein L32p|Zinc-binding ribosomal protein GO:0003735|GO:0006412|GO:0015934 MF_00340|PF01783|SSF57829|TIGR01031 CUB95_RS05245 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003772 Large ribosomal RNA subunit accumulation protein YceD PF02620 CUB95_RS05255 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003594|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF02518|PR00344|SM00387|SSF55874 CUB95_RS05265 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.60|SSF56925 CUB95_RS05270 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000209|IPR013783|IPR015500|IPR022398|IPR023828|IPR026444|IPR032304 Immunoglobulin-like fold|Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain|Secretion system C-terminal sorting domain|Subtilase, N-terminal GO:0004252|GO:0006508 G3DSA:2.60.40.10|G3DSA:3.40.50.200|PF00082|PF16361|PR00723|PS00137|PS00138|SSF52743|TIGR04183 CUB95_RS05275 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783|IPR024361 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal|Immunoglobulin-like fold G3DSA:2.60.40.10|PF13004 CUB95_RS05280 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783|IPR024361 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal|Immunoglobulin-like fold G3DSA:2.60.40.10|PF13004 CUB95_RS05290 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS05305 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006638|IPR007197|IPR013785|IPR031012 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Radical SAM|Radical SAM mobile pair protein B GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|SM00729|SSF102114|TIGR04470 CUB95_RS05310 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF13483|SSF56281 CUB95_RS05315 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 CUB95_RS05320 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeobox domain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|SM00342|SSF46689|SSF51215 CUB95_RS05325 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS05330 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061 Putative DNA-binding domain G3DSA:1.10.1660.10|PF12728|SSF46955 CUB95_RS05335 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007936 Virulence-associated E PF05272 CUB95_RS05340 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|PF01807|PF13155|SSF56731|SSF57783 CUB95_RS05345 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS05350 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.20.5.780 CUB95_RS05355 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 CUB95_RS05360 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003798 DNA recombination RmuC G3DSA:1.20.5.340|PF02646 CUB95_RS05365 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000713|IPR000821|IPR001608|IPR004101|IPR009006|IPR011079|IPR013221|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase/group IV decarboxylase, C-terminal|Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|PLP-binding barrel GO:0003824|GO:0005524|GO:0006522|GO:0008784|GO:0009058|GO:0016874 G3DSA:2.40.37.10|G3DSA:3.20.20.10|G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_01201|PF00842|PF01168|PF01225|PF08245|PR00992|SM01005|SSF50621|SSF51419|SSF53244|SSF53623|SSF63418|TIGR00492 CUB95_RS05370 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|SSF46785 CUB95_RS05375 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013830|IPR014982 GSCFA|SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF08885|SSF52266 CUB95_RS05380 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004881|IPR010914|IPR012340|IPR027417|IPR031944 Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Ribosome biogenesis GTPase RsgA|Ribosome biogenesis GTPase RsgA, N-terminal|RsgA GTPase domain GO:0003924|GO:0005525 G3DSA:1.10.40.50|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01820|PF03193|PF16745|SSF50249|SSF52540|TIGR00157 CUB95_RS05385 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002661|IPR023584 Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|MF_00040|PF01765|SSF55194|TIGR00496 CUB95_RS05390 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003018|IPR029016 GAF domain|GAF domain-like GO:0005515 G3DSA:3.30.450.40|PF13185|SM00065|SSF55781 CUB95_RS05395 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001737|IPR011530|IPR020596|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methylase transferase, conserved site|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PS01131|SM00650|SSF53335|TIGR00755 CUB95_RS05400 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706|TIGR00374 CUB95_RS05405 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001160|IPR002933 Peptidase M20|Peptidase M20C, Xaa-His dipeptidase GO:0006508|GO:0008152|GO:0016787 G3DSA:3.40.630.10|PF01546|PIRSF016599|PR00934|SSF53187|TIGR01893 CUB95_RS05410 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|G3DSA:3.30.460.20|PF01544|SSF143865|SSF144083 CUB95_RS05415 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007139 Protein of unknown function DUF349 G3DSA:1.20.120.20|PF03993 CUB95_RS05430 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004394 Protein Iojap/ribosomal silencing factor RsfS G3DSA:3.30.460.10|MF_01477|PF02410|SSF81301|TIGR00090 CUB95_RS05435 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|SM00382|SSF140990|SSF52540|TIGR01241 CUB95_RS05440 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 PF01148|PS01315 CUB95_RS05445 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF07715|PF13715|SSF49464|SSF56935 CUB95_RS05450 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012332 P22 tailspike C-terminal domain-like G3DSA:2.160.20.20 CUB95_RS05455 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011050|IPR012332 P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor G3DSA:2.160.20.20|SSF51126 CUB95_RS05460 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|SSF47729 CUB95_RS05465 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20 CUB95_RS05470 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60 CUB95_RS05475 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021958 Protein of unknown function DUF3575 G3DSA:2.40.128.130|PF12099 CUB95_RS05480 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021958 Protein of unknown function DUF3575 PF12099 CUB95_RS05490 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003594|IPR010559 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 G3DSA:3.30.565.10|PF06580|SSF55874 CUB95_RS05495 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001789|IPR007492|IPR011006 CheY-like superfamily|LytTR DNA-binding domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677 G3DSA:2.40.50.40|G3DSA:3.40.50.2300|PF00072|PF04397|SM00448|SM00850|SSF52172 CUB95_RS05500 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007329 FMN-binding GO:0010181|GO:0016020 PF04205|SM00900 CUB95_RS05505 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000534|IPR005986|IPR012080|IPR012280|IPR016040 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, beta-type|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0004073|GO:0005737|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|SM00859|SSF51735|SSF55347|TIGR01296 CUB95_RS05510 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006016|IPR006153|IPR014729 Cation/H+ exchanger|Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006812|GO:0006950|GO:0015299|GO:0016021|GO:0055085 G3DSA:1.20.91.10|G3DSA:3.40.50.620|PF00582|PF00999|SSF52402 CUB95_RS05515 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 CUB95_RS05520 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011991|IPR014464 Conserved virulence factor B|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:2.40.50.140|PF13509|PIRSF012524 CUB95_RS05540 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF14848|SSF47729 CUB95_RS05545 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001611|IPR013783|IPR032675 Immunoglobulin-like fold|Leucine-rich repeat|Leucine-rich repeat domain, L domain-like GO:0005515 G3DSA:2.60.40.10|G3DSA:3.80.10.10|PF13855|SSF52058 CUB95_RS05550 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|SSF52058 CUB95_RS05555 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005502 ADP-ribosylation/Crystallin J1 G3DSA:1.10.4080.10|PF03747|SSF101478 CUB95_RS05560 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.10.150.160|G3DSA:1.25.40.10|PF13181|SM00028|SSF48452 CUB95_RS05565 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|SSF53850 CUB95_RS05570 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|SSF74653|TIGR01352 CUB95_RS05575 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472 CUB95_RS05580 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472 CUB95_RS05585 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618 CUB95_RS05590 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000422|IPR000926|IPR016299|IPR017945|IPR032677 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain|GTP cyclohydrolase II|GTP cyclohydrolase II, RibA|Riboflavin biosynthesis protein RibBA GO:0003935|GO:0008686|GO:0009231 G3DSA:3.90.870.10|MF_00179|MF_00180|MF_01283|PF00925|PF00926|PIRSF001259|SSF142695|SSF55821|TIGR00505|TIGR00506 CUB95_RS05595 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005495 Permease LptG/LptF-related GO:0016021 PF03739 CUB95_RS05605 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 CUB95_RS05610 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 CUB95_RS05620 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012337|IPR013520 Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676 G3DSA:1.20.5.140|G3DSA:3.30.420.10|PF00929|SM00479|SSF53098 CUB95_RS05625 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005122 Uracil-DNA glycosylase-like G3DSA:3.40.470.10 CUB95_RS05630 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 CUB95_RS05635 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000594 THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|SSF69572 CUB95_RS05640 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR020846 Major facilitator superfamily domain G3DSA:1.20.1250.20|SSF103473 CUB95_RS05645 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000445|IPR003265|IPR005760|IPR011257|IPR015797|IPR023170|IPR029119 A/G-specific adenine glycosylase MutY|DNA glycosylase|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain|MutY, C-terminal|NUDIX hydrolase domain-like GO:0003677|GO:0003824|GO:0006281|GO:0006284|GO:0016787|GO:0019104 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PF00633|PF00730|PF14815|SM00478|SSF48150|SSF55811|TIGR01084 CUB95_RS05650 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002695|IPR011607 AICARFT/IMPCHase bienzyme|Methylglyoxal synthase-like domain GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.50.1380|PF01808|PF02142|SM00851|SSF52335 CUB95_RS05655 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004753 Cell shape determining protein MreB GO:0000902 G3DSA:3.30.420.40|PF06723|PR01652|SSF53067|TIGR00904 CUB95_RS05660 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007221 Rod shape-determining protein MreC GO:0008360 PF04085 CUB95_RS05665 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TIGR03426 CUB95_RS05670 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001460|IPR005311|IPR012338|IPR017790 Beta-lactamase/transpeptidase-like|Penicillin-binding protein 2|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658|GO:0016020 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|SSF56519|SSF56601|TIGR03423 CUB95_RS05675 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001182|IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site|Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0007049|GO:0016021|GO:0051301 PF01098|PS00428 CUB95_RS05685 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494 CUB95_RS05690 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007156|IPR023353 LemA|LemA-like domain G3DSA:1.20.1440.20|PF04011|SSF140478 CUB95_RS05695 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007621 TPM domain PF04536 CUB95_RS05705 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417 CarD-like/TRCF domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transcription-repair coupling factor|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0003684|GO:0005524|GO:0006281 G3DSA:3.40.50.300|MF_00969|PF00270|PF00271|PF02559|PF03461|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540|TIGR00580 CUB95_RS05715 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|SSF52058 CUB95_RS05720 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|SSF53187 CUB95_RS05725 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026444|IPR032675 Leucine-rich repeat domain, L domain-like|Secretion system C-terminal sorting domain G3DSA:3.80.10.10|SSF52058|TIGR04183 CUB95_RS05735 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006664|IPR006665|IPR008969|IPR011250|IPR013783 Carboxypeptidase-like, regulatory domain|Immunoglobulin-like fold|OmpA-like domain|Outer membrane protein, bacterial|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0009279|GO:0016021 G3DSA:2.40.160.20|G3DSA:2.60.40.10|G3DSA:3.30.1330.60|PF00691|PF13620|PR01021|SSF103088|SSF49464 CUB95_RS05740 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR011991|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0005515 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.30.70.100|PF13181|SM00028|SSF48452 CUB95_RS05745 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032675 Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|SSF52058 CUB95_RS05760 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003834|IPR012336|IPR028250 Cytochrome C biogenesis protein, transmembrane domain|Thiol:disulfide interchange protein DsbD, N-terminal domain|Thioredoxin-like fold GO:0016020|GO:0017004|GO:0055114 G3DSA:2.60.40.1250|G3DSA:3.40.30.10|PF02683|PF11412|PF13899|SSF52833 CUB95_RS05765 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000878|IPR008189|IPR014776|IPR014777|IPR018063 SAM-dependent methyltransferase RsmI, conserved site|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|PS01296|SSF53790|TIGR00096 CUB95_RS05770 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.10.287.510|G3DSA:1.20.5.320 CUB95_RS05775 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016192|IPR016193|IPR028883 APOBEC/CMP deaminase, zinc-binding|Cytidine deaminase-like|tRNA-specific adenosine deaminase GO:0002100|GO:0003824|GO:0008251|GO:0008270|GO:0016787 G3DSA:3.40.140.10|MF_00972|PF14437|PS00903|SSF53927 CUB95_RS05780 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003509|IPR011335 Restriction endonuclease type II-like|Uncharacterised protein family UPF0102 G3DSA:3.40.1350.10|MF_00048|PF02021|SSF52980 CUB95_RS05785 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004143|IPR004408 Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0004077|GO:0006464 G3DSA:2.30.30.100|G3DSA:3.30.930.10|PF03099|SSF55681|TIGR00121 CUB95_RS05790 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001048|IPR011817|IPR015963 Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|SSF53633|TIGR02075 CUB95_RS05795 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003442|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.40.50.300|PF02367|SSF52540|TIGR00150 CUB95_RS05800 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001789|IPR011006|IPR013973|IPR017849 Alkaline phosphatase-like, alpha/beta/alpha|CheY-like superfamily|PglZ domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003824|GO:0008152 G3DSA:3.40.50.2300|G3DSA:3.40.720.10|PF00072|PF08665|SM00448|SSF52172 CUB95_RS05805 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.20.58.280|G3DSA:1.25.40.10|PF13181|SM00028|SSF48452 CUB95_RS05815 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001986|IPR006264|IPR013792|IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0009073|GO:0016765 G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|PS00885|SSF55205 CUB95_RS05835 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000462|IPR004533 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--serine O-phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066|PS00379|TIGR00473 CUB95_RS05840 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003817|IPR033175 Phosphatidylserine decarboxylase, archaeal-type|Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 G3DSA:2.40.50.100|PF02666|TIGR00164 CUB95_RS05845 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003141|IPR004013|IPR004805|IPR011708|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003824|GO:0006260|GO:0008408 G3DSA:1.10.150.280|G3DSA:2.40.50.140|G3DSA:3.20.20.140|PF02811|PF07733|PF14579|SM00481|SSF89550|TIGR00594 CUB95_RS05850 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|SSF52833|TIGR01068 CUB95_RS05860 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001451|IPR010137|IPR011004|IPR029098 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Trimeric LpxA-like|Udp N-acetylglucosamine O-acyltransferase, C-terminal GO:0008610|GO:0008780 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|PF00132|PF13720|PIRSF000456|SSF51161 CUB95_RS05865 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01845 CUB95_RS05870 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00915 CUB95_RS05875 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 G3DSA:1.10.287.470|G3DSA:1.20.1600.10|G3DSA:2.40.50.100|PF13437|PF13533|SSF111369|TIGR01730 CUB95_RS05880 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002646|IPR003607|IPR006674|IPR006675|IPR032828 HD domain|HD/PDEase domain|HDIG domain|Poly A polymerase, head domain|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0003723|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|PF01743|PF01966|PF12627|SM00471|SSF81301|SSF81891|TIGR00277 CUB95_RS05885 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF13715|PF14905|SSF49464|SSF56935 CUB95_RS05895 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 PIRSF003097 CUB95_RS05900 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021448 Protein of unknown function DUF3098 PF11297 CUB95_RS05905 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673 CUB95_RS05910 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002501|IPR014780|IPR020103|IPR032819 Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain|tRNA pseudouridine synthase II, TruB|tRNA pseudouridylate synthase B, C-terminal GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 G3DSA:3.30.2350.10|MF_01080|PF01509|PF16198|SSF55120|TIGR00431 CUB95_RS05915 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 G3DSA:3.40.1780.10|PF02547|SSF111337|TIGR00113 CUB95_RS05920 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|SSF55083|TIGR01498 CUB95_RS05935 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|SSF52058 CUB95_RS05945 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002177|IPR008331|IPR009078|IPR012347|IPR023188 DNA-binding protein Dps|DNA-binding protein Dps, conserved site|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006879|GO:0006950|GO:0008199|GO:0016722|GO:0055114 G3DSA:1.20.1260.10|PF00210|PIRSF005900|PR01346|PS00819|SSF47240 CUB95_RS05955 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|SM01387|SSF47060|TIGR00952 CUB95_RS05960 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006298|IPR009000|IPR027417|IPR031157|IPR035647 EF-G domain III/V-like|Elongation factor EFG, domain V-like|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PR00315|PS00301|SM00838|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394 CUB95_RS05965 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250|IPR025665 Outer membrane protein beta-barrel domain|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13568|SSF56925 CUB95_RS05975 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005046|IPR011889|IPR032675 Bacterial surface protein 26-residue repeat|Leucine-rich repeat domain, L domain-like|Protein of unknown function DUF285 G3DSA:3.80.10.10|PF03382|SSF52058|TIGR02167 CUB95_RS05980 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003815|IPR011249 Metalloenzyme, LuxS/M16 peptidase-like|S-ribosylhomocysteinase (LuxS) GO:0003824|GO:0005506|GO:0009372|GO:0043768|GO:0046872 G3DSA:3.30.1360.80|PD013172|PF02664|PR01487|SSF63411 CUB95_RS05985 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000845|IPR010049 MTA/SAH nucleosidase|Nucleoside phosphorylase domain GO:0003824|GO:0008782|GO:0008930|GO:0009116|GO:0009164|GO:0019509 G3DSA:3.40.50.1580|PF01048|SSF53167|TIGR01704 CUB95_RS05990 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018580 Uncharacterised protein family YfhO PF09586 CUB95_RS06000 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012332 P22 tailspike C-terminal domain-like G3DSA:2.160.20.20 CUB95_RS06005 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011630 Clostridium phage phiCTP1, Gp74 PF07659 CUB95_RS06010 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000652|IPR013785|IPR020861|IPR022896 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096|GO:0008152 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|SSF51351|TIGR00419 CUB95_RS06015 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 CUB95_RS06020 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001474|IPR018234|IPR020602 GTP cyclohydrolase I|GTP cyclohydrolase I domain|GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 G3DSA:1.10.286.10|G3DSA:3.30.1130.10|MF_00223|PF01227|PS00859|PS00860|SSF55620|TIGR00063 CUB95_RS06025 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004808|IPR005135|IPR020847|IPR020848 AP endonuclease 1|AP endonuclease 1, binding site|AP endonuclease 1, conserved site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00726|PS00728|SSF56219|TIGR00195|TIGR00633 CUB95_RS06030 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|SSF52266 CUB95_RS06035 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004299|IPR024194|IPR028362 Alginate O-acetyltransferase AlgI|Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB|Membrane bound O-acyl transferase, MBOAT GO:0042121 PF03062|PIRSF016636|PIRSF500217 CUB95_RS06045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025347 Protein of unknown function DUF4251 PF14059 CUB95_RS06055 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006042|IPR006043|IPR017588 Uric acid permease UacT-like|Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085 PF00860|TIGR00801|TIGR03173 CUB95_RS06060 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000836|IPR010079|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like|Xanthine phosphoribosyltransferase GO:0009116|GO:0016763|GO:0043101|GO:0046110 G3DSA:3.40.50.2020|MF_01184|PF00156|SSF53271|TIGR01744 CUB95_RS06065 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 CUB95_RS06075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 CUB95_RS06080 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.20.5.780 CUB95_RS06085 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS06090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|PF01807|PF13155|SSF56731|SSF57783 CUB95_RS06095 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007936 Virulence-associated E PF05272 CUB95_RS06105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS06110 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:1.10.10.60|PF12728|SSF46955 CUB95_RS06145 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025624 PcfK-like protein PF14058 CUB95_RS06150 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009899 Antirestriction PF07275 CUB95_RS06155 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025586 PcfJ-like protein G3DSA:3.90.820.10|PF14284 CUB95_RS06160 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.30.450.80 CUB95_RS06170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 CUB95_RS06175 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13508|SSF55729 CUB95_RS06185 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 CUB95_RS06190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002196|IPR023346|IPR023347 Glycoside hydrolase, family 24|Lysozyme domain|Lysozyme-like domain GO:0003796|GO:0009253|GO:0016998 G3DSA:1.10.530.40|PF00959|SSF53955 CUB95_RS06195 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024355 Protein of unknown function DUF3872 PF12988 CUB95_RS06200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|PF01807|PF13155|SSF56731|SSF57783 CUB95_RS06205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018899 Conjugative transposon, TraO PF10626 CUB95_RS06210 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022298 Conjugative transposon, TraN PF13595|TIGR03780 CUB95_RS06215 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000123|IPR000477|IPR024937 Domain X|RNA-directed DNA polymerase (reverse transcriptase), msDNA|Reverse transcriptase domain GO:0003723|GO:0003964|GO:0006278|GO:0006397 G3DSA:3.30.70.270|PF00078|PF01348|PR00866|SSF56672 CUB95_RS06225 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022298 Conjugative transposon, TraN PF13595 CUB95_RS06230 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022187 Conjugative transposon, TraM PF12508|TIGR03779 CUB95_RS06235 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025050 Protein of unknown function DUF3989 PF13150 CUB95_RS06240 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007430|IPR022276 Bacterial virulence protein VirB8|Conjugative transposon, TraK GO:0016020 PF04335|TIGR03781 CUB95_RS06245 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012424|IPR022393 Conjugative transposon, TraJ|Conjugative transposon, TraJ, C-terminal PF07863|TIGR03782 CUB95_RS06250 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025415 Protein of unknown function DUF4141 G3DSA:1.20.58.430|PF13605 CUB95_RS06255 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022509|IPR024451|IPR027417 Conjugation system ATPase, TraG|Domain of unknown function DUF3875|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF12991|SSF52540|TIGR03783 CUB95_RS06260 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025407 Protein of unknown function DUF4133 PF13571 CUB95_RS06265 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008020|IPR025408 Capsid protein G8P|Protein of unknown function DUF4134 GO:0019028 PF13572|PIRSF004117 CUB95_RS06275 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|SSF52540 CUB95_RS06285 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS06290 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS06295 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|SSF52540 CUB95_RS06310 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 CUB95_RS06315 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025988|IPR027417|IPR032689 P-loop containing nucleoside triphosphate hydrolase|TraD/TraG, TraM recognition site|YWFCY domain G3DSA:3.40.50.300|PF12696|PF14293|SSF52540 CUB95_RS06325 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018534 Tetracycline regulation of excision, RteC PF09357 CUB95_RS06330 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011608 PRD domain GO:0006355 G3DSA:1.10.1790.10 CUB95_RS06340 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR005074|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0006810|GO:0008233|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PF03412|PS00211|SM00382|SSF52540|SSF90123 CUB95_RS06345 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF13715|PF14905|SSF49464|SSF56935 CUB95_RS06350 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007197|IPR013785|IPR023885 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13353|SSF102114|TIGR04085 CUB95_RS06360 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013747|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF08541|SSF53901 CUB95_RS06365 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001647|IPR009057 DNA-binding HTH domain, TetR-type|Homeobox domain-like GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|SSF46689 CUB95_RS06375 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003601|IPR003602|IPR006171|IPR013497|IPR013825|IPR023405|IPR025589 DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|TOPRIM domain|Topoisomerase C-terminal repeat GO:0003677|GO:0003916|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.40.50.140|PF01131|PF01751|PF13342|PR00417|SM00436|SM00437|SM00493|SSF56712 CUB95_RS06380 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015082 Protein of unknown function DUF1896 G3DSA:1.10.8.330|G3DSA:1.10.8.340|PF08989|SSF140753 CUB95_RS06390 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003594 Histidine kinase-like ATPase, C-terminal domain G3DSA:3.30.565.10|PF13589|SSF55874 CUB95_RS06395 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 CUB95_RS06400 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS06405 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS06410 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|SSF46955 CUB95_RS06415 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS06425 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS06435 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018891 Abortive bacteriophage infection, resistance PF10592 CUB95_RS06440 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025534 Putative PD-(D/E)XK family member (DUF4420) PF14390 CUB95_RS06445 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018310 Putative endonuclease, Z1 domain G3DSA:3.40.50.300|PF10593 CUB95_RS06450 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003594 Histidine kinase-like ATPase, C-terminal domain G3DSA:3.30.565.10|PF13589|SSF55874 CUB95_RS06460 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001525|IPR018117|IPR029063|IPR031303 C-5 cytosine methyltransferase|DNA methylase, C-5 cytosine-specific, conserved site|DNA methylase, C-5 cytosine-specific, active site|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168 G3DSA:3.40.50.150|PF00145|PR00105|PS00094|PS00095|SSF53335|TIGR00675 CUB95_RS06465 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001584|IPR009057|IPR011991|IPR012337|IPR025246 Homeobox domain-like|Integrase, catalytic core|Ribonuclease H-like domain|Transposase IS30-like HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PF13936|SSF46689|SSF53098 CUB95_RS06480 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS06485 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS06495 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000873|IPR025110 AMP-binding enzyme, C-terminal domain|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|SSF56801 CUB95_RS06500 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|SM00822|SSF51735 CUB95_RS06505 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PF01758 CUB95_RS06510 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250|IPR025737 MetA-pathway of phenol degradation, putative|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13557 CUB95_RS06515 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SM00028|SSF48452 CUB95_RS06520 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|SSF55083 CUB95_RS06525 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006073|IPR016496|IPR025121|IPR027417|IPR032305 GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PIRSF006809|PR00326|SSF52540|TIGR03156 CUB95_RS06530 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011004|IPR032533 Protein of unknown function DUF4954|Trimeric LpxA-like G3DSA:2.160.10.10|PF16314|SSF51161 CUB95_RS06535 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007863|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16, C-terminal|Peptidase M16, N-terminal GO:0003824|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|SSF63411 CUB95_RS06540 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004646|IPR004647|IPR011167 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain|Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain|Iron-dependent fumarate hydratase GO:0004333|GO:0006091|GO:0016829|GO:0016836 G3DSA:3.20.130.10|PF05681|PF05683|PIRSF001394|SSF117457|TIGR00722|TIGR00723 CUB95_RS06545 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000415|IPR016446|IPR029479 Flavin oxidoreductase Frp family|Nitroreductase|Nitroreductase-like GO:0016491|GO:0055114 G3DSA:3.40.109.10|PF00881|PIRSF005426|SSF55469 CUB95_RS06550 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000788|IPR013344|IPR013509 Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal|Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0005524|GO:0006260|GO:0031419|GO:0055114 G3DSA:3.20.70.20|PF00317|PF02867|PR01183|SSF51998|TIGR02504 CUB95_RS06555 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006156|IPR006157 Dihydroneopterin aldolase|Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 G3DSA:3.30.1130.10|PF02152|SM00905|SSF55620|TIGR00525|TIGR00526 CUB95_RS06560 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF01520|SM00646|SSF53187 CUB95_RS06565 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003399 Mce/MlaD G3DSA:1.20.1330.10|PF02470 CUB95_RS06580 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001957|IPR003593|IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR024633|IPR027417 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|DnaA N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PF11638|PR00051|PS01008|SM00382|SM00760|SSF48295|SSF52540|TIGR00362 CUB95_RS06585 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006282|IPR007371|IPR007373 Thiamin pyrophosphokinase|Thiamin pyrophosphokinase, catalytic domain|Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0004788|GO:0005524|GO:0006772|GO:0009229|GO:0030975 G3DSA:2.60.120.320|G3DSA:3.40.50.10240|PF04263|SSF63999|TIGR01378 CUB95_RS06590 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PF04973|TIGR01528 CUB95_RS06595 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 CUB95_RS06600 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.30.10 CUB95_RS06605 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004813|IPR004814 Oligopeptide transporter OPT|Oligopeptide transporter, OPT superfamily GO:0055085 PF03169|TIGR00728|TIGR00733 CUB95_RS06610 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023368|IPR023370 TsaA-like domain|Uncharacterised protein family UPF0066, conserved site G3DSA:2.40.30.70|G3DSA:3.30.2310.10|PF01980|PS01318|SSF118196|TIGR00104 CUB95_RS06615 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013083|IPR026870 Zinc finger, RING/FYVE/PHD-type|Zinc-ribbon domain G3DSA:3.30.40.10|PF13240 CUB95_RS06620 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 CUB95_RS06625 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008969 Carboxypeptidase-like, regulatory domain G3DSA:2.60.40.1120|PF13715|SSF49464 CUB95_RS06630 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007197|IPR013785 Aldolase-type TIM barrel|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13353|SSF102114 CUB95_RS06645 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001599|IPR002890|IPR008930|IPR013783 Alpha-2-macroglobulin|Alpha-2-macroglobulin, N-terminal|Immunoglobulin-like fold|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0004866 G3DSA:1.50.10.20|G3DSA:2.60.40.10|PF00207|PF01835|SM01360|SSF48239 CUB95_RS06650 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 MF_00191|PF02401 CUB95_RS06665 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000209|IPR015500|IPR023828 Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|PR00723|PS00138|SSF52743 CUB95_RS06670 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003953|IPR005288|IPR015939|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|L-aspartate oxidase|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0005737|GO:0008734|GO:0009435|GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|PF00890|PF02910|PIRSF000171|PR00368|PR00411|SSF46977|SSF51905|SSF56425|TIGR00551 CUB95_RS06675 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003473|IPR023066 Quinolinate synthase A, type 2|Quinolinate synthetase A GO:0008987|GO:0009435|GO:0016765|GO:0051539 G3DSA:3.40.50.10800|MF_00568|PF02445|SSF142754|TIGR00550 CUB95_RS06680 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002638|IPR004393|IPR013785|IPR022412|IPR027277 Aldolase-type TIM barrel|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|SSF51690|SSF54675|TIGR00078 CUB95_RS06685 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001094|IPR008254|IPR010086|IPR029039 Flavodoxin, long chain|Flavodoxin-like|Flavodoxin/nitric oxide synthase|Flavoprotein-like domain GO:0010181|GO:0055114 G3DSA:3.40.50.360|PF00258|PIRSF038996|PR00369|SSF52218|TIGR01752 CUB95_RS06690 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018594 Domain of unknown function DUF2023 G3DSA:3.30.2190.10|PF09633|SSF160448 CUB95_RS06700 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435 CUB95_RS06715 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002810 NfeD-like, C-terminal domain G3DSA:2.40.50.140|PF01957|SSF141322 CUB95_RS06720 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001107|IPR001972|IPR018080 Band 7 domain|Band 7/stomatin-like, conserved site|Stomatin family GO:0016020 PF01145|PR00721|PS01270|SM00244|SSF117892 CUB95_RS06725 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003331 UDP-N-acetylglucosamine 2-epimerase domain G3DSA:3.40.50.2000|PF02350|SSF53756 CUB95_RS06730 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|TIGR00797 CUB95_RS06735 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006121|IPR017969 Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site GO:0030001|GO:0046872 G3DSA:3.30.70.100|PF00403|PS01047|SSF55008 CUB95_RS06740 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001757|IPR006121|IPR008250|IPR017969|IPR018303|IPR023214|IPR023298 HAD-like domain|Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, phosphorylation site GO:0016021|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00943|PS00154|PS01047|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494 CUB95_RS06745 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003607|IPR004087|IPR004088|IPR006674|IPR006675|IPR015946|IPR017705|IPR022711 HD domain|HD/PDEase domain|HDIG domain|K Homology domain|K Homology domain, type 1|K homology domain-like, alpha/beta|Ribonuclease Y|Ribonuclease Y, N-terminal GO:0003676|GO:0003723|GO:0006402|GO:0016020 G3DSA:1.10.3210.10|G3DSA:3.30.300.20|MF_00335|PF00013|PF01966|PF12072|SM00322|SM00471|SSF109604|SSF54791|TIGR00277|TIGR03319 CUB95_RS06750 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007838 Cell division protein ZapA-like PF05164|SSF102829 CUB95_RS06755 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.20.5.170 CUB95_RS06765 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005835|IPR005907|IPR029044 Glucose-1-phosphate thymidylyltransferase, short form|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0008879|GO:0009058|GO:0016779|GO:0045226 G3DSA:3.90.550.10|PF00483|SSF53448|TIGR01207 CUB95_RS06770 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003856|IPR005702|IPR025669|IPR027417 AAA domain|Exopolysaccharide synthesis protein|P-loop containing nucleoside triphosphate hydrolase|Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020|GO:0045226 G3DSA:3.30.1890.10|G3DSA:3.40.50.300|PF02706|PF13614|SSF52540|TIGR01007 CUB95_RS06775 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016769|IPR023214 Bacteriophage SP01, Orf1|HAD-like domain G3DSA:3.40.50.1000|PIRSF020079|SSF56784 CUB95_RS06785 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|SSF56219 CUB95_RS06790 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002701|IPR006218|IPR013785|IPR020822 Aldolase-type TIM barrel|Chorismate mutase|Chorismate mutase, type II|DAHP synthetase I/KDSA GO:0003824|GO:0009058|GO:0046417 G3DSA:1.20.59.10|G3DSA:3.20.20.70|PF00793|PF01817|SM00830|SSF48600|SSF51569 CUB95_RS06795 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|SM00028|SSF48452 CUB95_RS06800 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012867 Domain of unknown function DUF1648 PF07853 CUB95_RS06805 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005920|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Imidazolonepropionase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0005737|GO:0016787|GO:0016810|GO:0016812|GO:0019556 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_00372|PF01979|SSF51338|SSF51556|TIGR01224 CUB95_RS06810 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001106|IPR005921|IPR008948|IPR022313|IPR024083 Aromatic amino acid lyase|Fumarase/histidase, N-terminal|Histidine ammonia-lyase|L-Aspartase-like|Phenylalanine/histidine ammonia-lyases, active site GO:0003824|GO:0004397|GO:0005737|GO:0006548|GO:0016841 G3DSA:1.10.275.10|G3DSA:1.20.200.10|PF00221|PS00488|SSF48557|TIGR01225 CUB95_RS06815 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023636|IPR023637|IPR035085|IPR035400|IPR035401 Urocanase|Urocanase conserved site|Urocanase, C-terminal domain|Urocanase, N-terminal domain|Urocanase, Rossmann-like domain GO:0016153 G3DSA:3.40.1770.10|MF_00577|PF01175|PF17391|PF17392|PIRSF001423|PS01233|SSF111326|TIGR01228 CUB95_RS06820 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004227|IPR007044|IPR012886|IPR013802|IPR022384 Cyclodeaminase/cyclohydrolase|Formiminotransferase catalytic domain|Formiminotransferase subdomain|Formiminotransferase, C-terminal subdomain|Formiminotransferase, N-terminal subdomain GO:0003824|GO:0005542|GO:0008152|GO:0016740|GO:0044237 G3DSA:3.30.70.670|G3DSA:3.30.990.10|PF02971|PF04961|PF07837|SM01221|SM01222|SSF101262|SSF55116|TIGR02024 CUB95_RS06825 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008183|IPR011013|IPR014718 Aldose 1-/Glucose-6-phosphate 1-epimerase|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0016853|GO:0030246 G3DSA:2.70.98.10|PF01263|SSF74650 CUB95_RS06845 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000792|IPR011991|IPR012312|IPR016032 Haemerythrin-like|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.520|PF00196|PF01814|PR00038|PS00622|SM00421|SSF46894 CUB95_RS06850 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|SM00421|SSF46894 CUB95_RS06855 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001736|IPR022924|IPR025202 Cardiolipin synthase|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824|GO:0008808|GO:0016780|GO:0032049 G3DSA:3.30.870.10|PF13091|PIRSF000850|SM00155|SSF56024|TIGR04265 CUB95_RS06860 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000644|IPR001347|IPR004800 CBS domain|Phosphosugar isomerase, KdsD/KpsF-type|Sugar isomerase (SIS) GO:0005975|GO:0016853|GO:0097367|GO:1901135 G3DSA:3.10.580.10|G3DSA:3.40.50.10490|PF00571|PF01380|PIRSF004692|SSF53697|TIGR00393 CUB95_RS06865 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006218|IPR006269|IPR013785 3-deoxy-8-phosphooctulonate synthase|Aldolase-type TIM barrel|DAHP synthetase I/KDSA GO:0003824|GO:0005737|GO:0008152|GO:0008676|GO:0009058 G3DSA:3.20.20.70|PF00793|SSF51569|TIGR01362 CUB95_RS06870 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.30.420.40|SSF53067 CUB95_RS06875 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618 CUB95_RS06885 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472 CUB95_RS06890 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472 CUB95_RS06905 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR013842|IPR027417|IPR035647 EF-G domain III/V-like|Elongation factor 4|Elongation factor EFG, domain V-like|GTP-binding protein LepA, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation elongation factor EFTu-like, domain 2 GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|SSF52540|SSF54980|TIGR00231|TIGR01393 CUB95_RS06910 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000595|IPR014710|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF00027|SSF51206 CUB95_RS06915 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021428 Protein of unknown function DUF3078 PF11276 CUB95_RS06920 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002142|IPR004634|IPR004635|IPR029045 ClpP/crotonase-like domain|Peptidase S49|Peptidase S49, SppA|Peptidase S49, protease IV GO:0006465|GO:0006508|GO:0008233|GO:0016021 G3DSA:3.90.226.10|PF01343|PIRSF001217|SSF52096|TIGR00705|TIGR00706 CUB95_RS06925 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003758|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 G3DSA:3.40.50.300|MF_00409|PF02606|SSF52540|TIGR00682 CUB95_RS06930 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000845|IPR011268|IPR011270 Nucleoside phosphorylase domain|Purine nucleoside phosphorylase|Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0003824|GO:0004731|GO:0006139|GO:0009116 G3DSA:3.40.50.1580|PF01048|PIRSF000477|SSF53167|TIGR01697|TIGR01700 CUB95_RS06935 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006283|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Thiamine-monophosphate kinase GO:0009030|GO:0009228 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|PF00586|PF02769|PIRSF005303|SSF55326|SSF56042 CUB95_RS06945 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000103|IPR008255|IPR012081|IPR012336|IPR023753 Alkyl hydroperoxide reductase subunit F|FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin-like fold GO:0000302|GO:0008785|GO:0016491|GO:0016651|GO:0050660|GO:0051287|GO:0055114 G3DSA:3.40.30.10|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF07992|PIRSF000238|PR00368|PR00469|PS00573|SSF51905|SSF52833|TIGR03140 CUB95_RS06950 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000866|IPR012336|IPR017559|IPR019479|IPR024706 Alkyl hydroperoxide reductase subunit C|Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like fold GO:0006979|GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.30.1020.10|G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|SSF52833|TIGR03137 CUB95_RS06955 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR029065 Enolase|Enolase C-terminal domain-like|Enolase N-terminal domain-like|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 CUB95_RS06960 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 CUB95_RS06965 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023198|IPR023214 HAD-like domain|Phosphoglycolate phosphatase, domain 2 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784 CUB95_RS06970 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 CUB95_RS06975 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001375|IPR011659|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|WD40-like Beta Propeller GO:0006508|GO:0008236 G3DSA:2.140.10.30|G3DSA:3.40.50.1820|PF00326|PF07676|SSF53474|SSF82171 CUB95_RS06980 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001708|IPR019998|IPR028053|IPR028055 Membrane insertase OXA1/ALB3/YidC|Membrane insertase YidC|Membrane insertase YidC, N-terminal|Membrane insertase YidC/Oxa1, C-terminal GO:0016021|GO:0051205 G3DSA:1.20.58.60|MF_01810|PF02096|PF14849|PR00701|TIGR03592|TIGR03593 CUB95_RS06985 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|SSF52317|SSF52540|TIGR00337 CUB95_RS06990 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026950 Capsule assembly protein Wzi PF14052 CUB95_RS06995 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024311 Lipocalin-like domain PF16585 CUB95_RS07000 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000715|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016021 PF00953|PS01348 CUB95_RS07005 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS07015 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.50.2000|SSF53756 CUB95_RS07020 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003331|IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like|UDP-N-acetylglucosamine 2-epimerase domain GO:0008761 G3DSA:3.40.50.2000|PF02350|SSF53756|TIGR00236 CUB95_RS07025 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032719 Glycosyltransferase WbsX PF14307 CUB95_RS07030 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic TIGR04370 CUB95_RS07035 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002797 Polysaccharide biosynthesis protein GO:0016020 PF01943 CUB95_RS07040 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.30.1890.10 CUB95_RS07045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531 CUB95_RS07050 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003362 Bacterial sugar transferase PF02397 CUB95_RS07055 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001126|IPR017961|IPR022880|IPR024728 DNA polymerase IV|DNA polymerase type-Y, HhH motif|DNA polymerase, Y-family, little finger domain|UmuC domain GO:0003684|GO:0003887|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|MF_01113|PF00817|PF11798|PF11799|SSF100879|SSF56672 CUB95_RS07060 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 CUB95_RS07065 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026444 Secretion system C-terminal sorting domain G3DSA:2.60.40.1270|TIGR04183 CUB95_RS07075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011871 Fibrobacter succinogenes major paralogous domain PF09603 CUB95_RS07085 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003741 LUD domain G3DSA:3.40.50.10420|PF02589|SSF100950 CUB95_RS07090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003741|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|LUD domain G3DSA:3.30.70.20|G3DSA:3.40.50.10420|PF02589|PF13183|PS00198|SSF100950|SSF54862 CUB95_RS07095 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004017 Cysteine-rich domain PF02754 CUB95_RS07100 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000888|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 G3DSA:2.60.120.10|PD001462|PF00908|SSF51182|TIGR01221 CUB95_RS07105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR031762 Protein of unknown function DUF4738 PF15889 CUB95_RS07110 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023190|IPR023214 HAD-like domain|Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 G3DSA:1.10.150.210|G3DSA:3.30.70.260|G3DSA:3.40.50.1000|PF12710|PF13740|SSF55021|SSF56784|TIGR00338|TIGR01488 CUB95_RS07115 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|SSF53383 CUB95_RS07120 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13480|SSF55729 CUB95_RS07125 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008894|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|WxcM-like, C-terminal G3DSA:2.60.120.10|PF05523|SSF51182 CUB95_RS07130 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005888|IPR016040 NAD(P)-binding domain|dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|SSF51735|TIGR01181 CUB95_RS07135 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000979|IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like|Phosphodiesterase MJ0936/Vps29 G3DSA:3.60.21.10|PF12850|SSF56300|TIGR00040 CUB95_RS07140 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026865|IPR027417 Cytidylate kinase-like family|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13189|SSF52540 CUB95_RS07145 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|TIGR00797 CUB95_RS07150 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 CUB95_RS07160 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021670 Protein of unknown function DUF3256 PF11644|SSF160925 CUB95_RS07165 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004740|IPR020846 Major facilitator superfamily domain|Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 G3DSA:1.20.1250.20|PF03825|SSF103473|TIGR00889 CUB95_RS07170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001943|IPR003729 Bifunctional nuclease domain|UVR domain GO:0004518|GO:0005515 G3DSA:4.10.860.10|PF02151|PF02577|SSF103256 CUB95_RS07175 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006700|IPR015947|IPR029026|IPR029028 Alpha/beta knot methyltransferases|PUA-like domain|Ribosomal RNA small subunit methyltransferase E|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0006364|GO:0008168 G3DSA:2.40.240.20|G3DSA:3.40.1280.10|PF04452|PIRSF015601|SSF75217|SSF88697|TIGR00046 CUB95_RS07180 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF07715|PF13620|SSF49464|SSF56935 CUB95_RS07185 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|SSF52058 CUB95_RS07190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 CUB95_RS07195 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011467|IPR013783 Immunoglobulin-like fold|Protein of unknown function DUF1573 G3DSA:2.60.40.10|PF07610 CUB95_RS07200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000109|IPR018456|IPR020846 Major facilitator superfamily domain|PTR2 family proton/oligopeptide symporter, conserved site|Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0006857|GO:0016020 G3DSA:1.20.1250.20|PF00854|PS01023|SSF103473 CUB95_RS07205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250|IPR025665 Outer membrane protein beta-barrel domain|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13568|SSF56925 CUB95_RS07210 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018392|IPR028082 LysM domain|Periplasmic binding protein-like I G3DSA:3.10.350.10|G3DSA:3.40.50.2300|PF01476|SM00257|SSF53822|SSF54106 CUB95_RS07215 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000601|IPR013783|IPR026341 Gliding motility-associated, C-terminal domain|Immunoglobulin-like fold|PKD domain G3DSA:2.60.40.10|PF13585|SSF49299|TIGR04131 CUB95_RS07220 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004602|IPR017871|IPR027417 ABC transporter, conserved site|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:3.30.190.20|G3DSA:3.40.50.300|PS00211|SSF52540|TIGR00630 CUB95_RS07230 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005911|IPR006638|IPR007197|IPR013785|IPR032432 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Protein YhcC-like|Radical SAM|Radical SAM, C-terminal extension GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF16199|SM00729|SSF102114|TIGR01212 CUB95_RS07235 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001375|IPR002469|IPR029058 Alpha/Beta hydrolase fold|Dipeptidylpeptidase IV, N-terminal domain|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 G3DSA:2.140.10.30|G3DSA:3.40.50.1820|PF00326|PF00930|SSF53474|SSF82171 CUB95_RS07240 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF14905|SSF56935 CUB95_RS07255 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.50.2000|SSF53756 CUB95_RS07260 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS07265 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS07270 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic PF13440 CUB95_RS07275 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS07285 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000023|IPR012003|IPR012828|IPR015912|IPR022953 ATP-dependent 6-phosphofructokinase|ATP-dependent 6-phosphofructokinase, prokaryotic|ATP-dependent 6-phosphofructokinase, prokaryotic-type|Phosphofructokinase domain|Phosphofructokinase, conserved site GO:0003872|GO:0005524|GO:0006002|GO:0006096|GO:0008443 G3DSA:3.40.50.450|MF_00339|PF00365|PIRSF000532|PR00476|PS00433|SSF53784|TIGR02482 CUB95_RS07290 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000194|IPR003593|IPR004100|IPR005722|IPR020003|IPR024034|IPR027417 AAA+ ATPase domain|ATP synthase, F1 complex, beta subunit|ATPase, F1/V1 complex, beta/alpha subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015992|GO:0045261|GO:0046034|GO:0046933 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PS00152|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039 CUB95_RS07295 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 G3DSA:2.60.15.10|PD000944|PF02823|SSF51344 CUB95_RS07300 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR020846 Major facilitator superfamily domain SSF103473 CUB95_RS07305 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.120.220|MF_01393|PF00119|PR00123|SSF81336|TIGR01131 CUB95_RS07310 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000454|IPR002379|IPR005953|IPR020537 ATP synthase, F0 complex, subunit C|ATP synthase, F0 complex, subunit C, DCCD-binding site|ATP synthase, F0 complex, subunit C, bacterial/chloroplast|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PR00124|PS00605|SSF81333|TIGR01260 CUB95_RS07315 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002146|IPR005864|IPR028987 ATP synthase, F0 complex, subunit b, bacterial|ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast|F-type ATP synthase subunit B-like, membrane domain GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.5.620|MF_01398|PF00430|SSF81573|TIGR01144 CUB95_RS07320 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000711|IPR026015 ATPase, OSCP/delta subunit|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain GO:0015986|GO:0046933 G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|SSF47928|TIGR01145 CUB95_RS07325 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR020003|IPR023366|IPR027417 ATP synthase subunit alpha-like domain|ATP synthase, F1 complex, alpha subunit|ATP synthase, alpha subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015992|GO:0045261|GO:0046034|GO:0046933 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PS00152|SSF47917|SSF50615|SSF52540|TIGR00962 CUB95_RS07330 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 G3DSA:1.10.287.80|MF_00815|PF00231|PR00126|SSF52943|TIGR01146 CUB95_RS07345 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 CUB95_RS07350 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01085|PS01086|SSF51366|TIGR01163 CUB95_RS07355 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011060|IPR013785|IPR013798 Aldolase-type TIM barrel|Indole-3-glycerol phosphate synthase|Ribulose-phosphate binding barrel GO:0003824|GO:0004425|GO:0008152 G3DSA:3.20.20.70|PF00218|SSF51366 CUB95_RS07360 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011060|IPR013785 Aldolase-type TIM barrel|Ribulose-phosphate binding barrel GO:0003824|GO:0008152 G3DSA:3.20.20.70|SSF51366 CUB95_RS07365 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0008152 G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|SSF52317|TIGR00566 CUB95_RS07370 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006645 NusG, N-terminal GO:0006355 G3DSA:3.30.70.940|PF02357|SSF82679 CUB95_RS07375 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeobox domain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|SM00342|SSF46689 CUB95_RS07380 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic PF03571 CUB95_RS07385 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014825|IPR016024 Armadillo-type fold|DNA alkylation repair enzyme GO:0005488 G3DSA:1.20.1660.10|PF08713|SSF48371 CUB95_RS07390 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000795|IPR004548|IPR005225|IPR009000|IPR027417|IPR031157|IPR032090|IPR035647 EF-G domain III/V-like|P-loop containing nucleoside triphosphate hydrolase|Peptide chain release factor 3|Peptide chain release factor 3, C-terminal|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation protein, beta-barrel domain GO:0003924|GO:0005525|GO:0005737|GO:0006415 G3DSA:2.40.30.10|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00072|PF00009|PF16658|PR00315|PS00301|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR00503 CUB95_RS07395 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005913|IPR016040|IPR029903 NAD(P)-binding domain|RmlD-like substrate binding domain|dTDP-4-dehydrorhamnose reductase family G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF04321|SSF51735|TIGR01214 CUB95_RS07400 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032574 Protein of unknown function DUF4924 PF16271 CUB95_RS07405 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PF01810 CUB95_RS07410 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000600 ROK family G3DSA:3.30.420.40|PF00480|PS01125|SSF53067 CUB95_RS07420 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026444 Secretion system C-terminal sorting domain TIGR04183 CUB95_RS07425 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|SSF88659|SSF88946|TIGR02937 CUB95_RS07440 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003790|IPR013783|IPR017853 Glycoside hydrolase superfamily|Glycosyl hydrolase-like 10|Immunoglobulin-like fold G3DSA:2.60.40.10|G3DSA:3.20.20.80|PF02638|SSF51445 CUB95_RS07445 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005046|IPR011889|IPR032675 Bacterial surface protein 26-residue repeat|Leucine-rich repeat domain, L domain-like|Protein of unknown function DUF285 G3DSA:3.80.10.10|PF03382|SSF52047|SSF52058|TIGR02167 CUB95_RS07460 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 G3DSA:2.40.230.20|PF16412|SSF111364 CUB95_RS07465 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002649|IPR016009|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PIRSF000386|SSF75217|TIGR00088 CUB95_RS07470 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin-like phospholipase domain GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 CUB95_RS07475 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000994|IPR007865|IPR028980|IPR029149 Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24 GO:0004177|GO:0030145 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF05195|SM01011|SSF53092|SSF55920 CUB95_RS07480 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 G3DSA:3.90.70.10|PF03051|PIRSF005700|SSF54001 CUB95_RS07485 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001667|IPR003156|IPR004610 Bacterial RecJ exonuclease|DDH domain|DHHA1 domain GO:0003676|GO:0006281|GO:0006310|GO:0008409 G3DSA:3.90.1640.10|PF01368|PF02272|SSF64182|TIGR00644 CUB95_RS07490 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001650|IPR004589|IPR011545|IPR011991|IPR014001|IPR027417|IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain|DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0005524|GO:0006310|GO:0008026 G3DSA:1.10.10.10|G3DSA:3.40.50.300|PF00270|PF00271|PF16124|SM00487|SM00490|SSF52540|TIGR00614 CUB95_RS07495 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011032|IPR020818 GroES chaperonin family|GroES-like GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|SM00883|SSF50129 CUB95_RS07500 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|SSF48592|SSF52029|SSF54849|TIGR02348 CUB95_RS07505 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014825|IPR016024 Armadillo-type fold|DNA alkylation repair enzyme GO:0005488 G3DSA:1.25.40.290|PF08713|SSF48371 CUB95_RS07510 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase, tRNA-binding arm|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|tRNA-binding arm GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438 G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422 CUB95_RS07515 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004518|IPR011551 NTP pyrophosphohydrolase MazG|NTP pyrophosphohydrolase MazG, putative catalytic core G3DSA:1.10.287.1080|PF03819|SSF101386|TIGR00444 CUB95_RS07525 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001279|IPR013471 Metallo-beta-lactamase|Ribonuclease Z/BN GO:0016891|GO:0042779 G3DSA:3.60.15.10|MF_01818|PF00753|PF12706|SSF56281|TIGR02651 CUB95_RS07530 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 G3DSA:3.90.840.10|PF01289|SSF56978 CUB95_RS07535 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005902|IPR010992 Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|SSF47729|TIGR01201 CUB95_RS07545 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR009057|IPR011006|IPR011990|IPR018060|IPR018062|IPR019734 CheY-like superfamily|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Histidine kinase-like ATPase, C-terminal domain|Homeobox domain-like|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0000155|GO:0000160|GO:0003677|GO:0003700|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.150.200|G3DSA:1.10.287.130|G3DSA:1.25.40.10|G3DSA:3.30.565.10|G3DSA:3.30.70.100|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF12833|PF13176|PR00344|PS00041|SM00028|SM00342|SM00387|SM00388|SM00448|SSF46689|SSF47384|SSF48452|SSF52172|SSF55874 CUB95_RS07550 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012332 P22 tailspike C-terminal domain-like G3DSA:2.160.20.20 CUB95_RS07560 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|SSF53955|SSF56601 CUB95_RS07565 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|SSF52540|TIGR00174 CUB95_RS07570 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001451|IPR010137|IPR011004|IPR029098 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Trimeric LpxA-like|Udp N-acetylglucosamine O-acyltransferase, C-terminal GO:0008610|GO:0008780 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|PF00132|PF13720|PIRSF000456|SSF51161|TIGR01852 CUB95_RS07575 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004463|IPR010084|IPR011334|IPR013114|IPR015870|IPR020568|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain|Ribosomal protein S5 domain 2-type fold|UDP-3-O-acyl N-acetylglucosamine deacetylase|UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal|UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0005737|GO:0006633|GO:0008759|GO:0009245|GO:0016836 G3DSA:3.10.129.10|G3DSA:3.30.1700.10|G3DSA:3.30.230.20|MF_00388|PF03331|PF07977|SSF54211|SSF54637|TIGR01750 CUB95_RS07580 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001451|IPR007691|IPR011004|IPR020573 Hexapeptide repeat|Trimeric LpxA-like|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016410|GO:0016747 G3DSA:2.160.10.10|MF_00523|PF00132|PF04613|SSF51161|TIGR01853 CUB95_RS07585 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604 CUB95_RS07590 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001754|IPR011060|IPR011995|IPR013785 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, type 2|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0006221|GO:0008152 G3DSA:3.20.20.70|MF_01215|PF00215|SM00934|SSF51366|TIGR02127 CUB95_RS07595 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000352|IPR004373|IPR005139 Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00093|PF00472|PF03462|PS00745|SM00937|SSF75620|TIGR00019 CUB95_RS07600 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain G3DSA:3.30.1330.10|G3DSA:3.90.650.10|PF02769|SSF55326|SSF56042 CUB95_RS07605 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013708|IPR016040 NAD(P)-binding domain|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 G3DSA:3.40.50.10860|G3DSA:3.40.50.720|PF08501|SSF51735|SSF53223 CUB95_RS07610 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004033|IPR023576|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|UbiE/COQ5 methyltransferase|UbiE/COQ5 methyltransferase, conserved site GO:0008168 G3DSA:3.40.50.150|MF_01813|PF01209|PS01183|PS01184|SSF53335|TIGR01934 CUB95_RS07615 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018236|IPR028923 SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01058|SSF56104 CUB95_RS07620 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003714|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0005524 G3DSA:3.40.50.300|PF02562|SSF52540 CUB95_RS07625 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001264|IPR011812|IPR023346 Biosynthetic peptidoglycan transglycosylase|Glycosyl transferase, family 51|Lysozyme-like domain GO:0009252|GO:0009274|GO:0016021|GO:0016763 G3DSA:1.10.3810.10|MF_00766|PF00912|SSF53955|TIGR02070 CUB95_RS07630 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014017|IPR027417|IPR034739 P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD/AddA helicase, N-terminal GO:0005524|GO:0016787 G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|SSF52540 CUB95_RS07635 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011604|IPR027417 Exonuclease, phage-type/RecB, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0004518 G3DSA:3.40.50.300|G3DSA:3.90.320.10|PF12705|SSF52540 CUB95_RS07640 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014017|IPR027417|IPR034739 P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD/AddA helicase, N-terminal GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF00580|PF13361|SSF52540 CUB95_RS07645 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS07655 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS07660 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|SSF46955 CUB95_RS07665 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS07670 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS07675 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001650|IPR003356|IPR027417|IPR029063 DNA methylase, adenine-specific|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0006306|GO:0008170 G3DSA:3.40.50.150|G3DSA:3.40.50.300|PF00271|PF02384|PR00507|SM00490|SSF52540|SSF53335 CUB95_RS07680 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015082 Protein of unknown function DUF1896 G3DSA:1.10.8.330|G3DSA:1.10.8.340|PF08989|SSF140753 CUB95_RS07685 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003601|IPR003602|IPR006171|IPR013497|IPR013825|IPR023405|IPR025589 DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|TOPRIM domain|Topoisomerase C-terminal repeat GO:0003677|GO:0003916|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.40.50.140|PF01131|PF01751|PF13342|PR00417|SM00436|SM00437|SM00493|SSF56712 CUB95_RS07695 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeobox domain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 CUB95_RS07700 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004869 Membrane transport protein MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|SSF82866 CUB95_RS07705 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR033399 Putative outer membrane lipoprotein-sorting protein G3DSA:2.50.20.10|PF17131 CUB95_RS07710 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.40.160.10|SSF56935 CUB95_RS07715 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF07715|PF13715|SSF49464|SSF56935 CUB95_RS07720 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF75011 CUB95_RS07725 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018534 Tetracycline regulation of excision, RteC PF09357 CUB95_RS07730 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009362 Protein of unknown function DUF1016 PF06250 CUB95_RS07740 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025988|IPR027417|IPR032689 P-loop containing nucleoside triphosphate hydrolase|TraD/TraG, TraM recognition site|YWFCY domain G3DSA:3.40.50.300|PF12696|PF14293|SSF52540 CUB95_RS07760 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 CUB95_RS07765 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025988|IPR027417|IPR032689 P-loop containing nucleoside triphosphate hydrolase|TraD/TraG, TraM recognition site|YWFCY domain G3DSA:3.40.50.300|PF12696|PF14293|SSF52540 CUB95_RS07775 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012337|IPR025668 Ribonuclease H-like domain|Transposase DDE domain GO:0003676 PF13612|SSF53098 CUB95_RS07780 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018534 Tetracycline regulation of excision, RteC PF09357 CUB95_RS07785 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011608 PRD domain GO:0006355 G3DSA:1.10.1790.10 CUB95_RS07795 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR005074|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0006810|GO:0008233|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PF03412|PS00211|SM00382|SSF52540|SSF90123 CUB95_RS07800 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF13715|PF14905|SSF49464|SSF56935 CUB95_RS07805 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006638|IPR007197|IPR013785|IPR023885 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13186|SM00729|SSF102114|TIGR04085 CUB95_RS07810 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013747|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF08541|SSF53901 CUB95_RS07815 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001647|IPR009057 DNA-binding HTH domain, TetR-type|Homeobox domain-like GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|SSF46689 CUB95_RS07820 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025222|IPR025343 Protein of unknown function DUF3945|Protein of unknown function DUF4099 PF13101|PF13351 CUB95_RS07830 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015082 Protein of unknown function DUF1896 G3DSA:1.10.8.330|G3DSA:1.10.8.340|PF08989|SSF140753 CUB95_RS07835 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001650|IPR003356|IPR027417|IPR029063 DNA methylase, adenine-specific|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0006306|GO:0008170 G3DSA:3.40.50.150|G3DSA:3.40.50.300|PF00271|PF02384|PR00507|SM00490|SSF52540|SSF53335 CUB95_RS07840 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS07845 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS07850 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|SSF46955 CUB95_RS07855 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS07865 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS07870 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 G3DSA:3.75.10.10|PF04371|SSF55909 CUB95_RS07875 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|SSF56317 CUB95_RS07880 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 CUB95_RS07885 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001451|IPR011004|IPR024688 Hexapeptide repeat|Maltose/galactoside acetyltransferase|Trimeric LpxA-like GO:0016407 G3DSA:2.160.10.10|PF00132|PF12464|SM01266|SSF51161 CUB95_RS07890 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002942|IPR006145|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|G3DSA:3.30.2350.10|PF00849|SSF55120|SSF55174 CUB95_RS07895 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001623|IPR008971 DnaJ domain|HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.60.260.20|PF00226|PR00625|SM00271|SSF46565|SSF49493 CUB95_RS07900 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005730|IPR009006|IPR022643|IPR022644|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Carboxynorspermidine decarboxylase|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|PLP-binding barrel GO:0003824|GO:0016831|GO:0045312 G3DSA:2.40.37.10|G3DSA:3.20.20.10|PF00278|PF02784|PIRSF038941|SSF50621|SSF51419|TIGR01047 CUB95_RS07905 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013785|IPR022998 Aldolase-type TIM barrel|Thiamine phosphate synthase/TenI GO:0003824 G3DSA:3.20.20.70|PF02581|SSF51391 CUB95_RS07910 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000842|IPR005946|IPR029057|IPR029099 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|PF13793|PF14572|PS00114|SM01400|SSF53271|TIGR01251 CUB95_RS07915 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018673 Protein of unknown function DUF2141 PF09912 CUB95_RS07920 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF14905|SSF56935 CUB95_RS07930 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011991|IPR027395 Winged helix DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13601|SSF46785 CUB95_RS07935 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005151|IPR029045 ClpP/crotonase-like domain|Tail specific protease GO:0006508|GO:0008236 G3DSA:3.90.226.10|PF03572|SM00245|SSF52096 CUB95_RS07940 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|SSF46785 CUB95_RS07945 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|SM00788|SSF52540|TIGR00184 CUB95_RS07950 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004154|IPR004516|IPR015807 Anticodon-binding|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0004821|GO:0005524|GO:0005737|GO:0006427 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF03129|PF13393|PIRSF001549|SSF52954|SSF55681|TIGR00442 CUB95_RS07960 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000445|IPR003265|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PIRSF001435|SM00478|SSF48150|TIGR01083 CUB95_RS07965 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012808|IPR015996 Conserved hypothetical protein CHP02453|Uncharacterised conserved protein UCP028451 PF09365|PIRSF028451|TIGR02453 CUB95_RS07980 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000843|IPR010982|IPR025997|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13407|PS00356|SM00354|SSF47413|SSF53822 CUB95_RS07985 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003594|IPR004358|IPR011990|IPR033405|IPR033406 Domain of unknown function DUF5112|Domain of unknown function DUF5113|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase-related protein, C-terminal|Tetratricopeptide-like helical domain GO:0005515|GO:0016310|GO:0016772 G3DSA:1.25.40.10|G3DSA:3.30.565.10|PF02518|PF17139|PF17140|PR00344|SM00387|SSF48452|SSF55874 CUB95_RS07990 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SSF52172 CUB95_RS07995 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 PF03806 CUB95_RS08030 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PIRSF002070|SSF50249|TIGR00621 CUB95_RS08035 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000644|IPR002550|IPR005170|IPR016166|IPR016169|IPR019862 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Domain of unknown function DUF21|FAD-binding, type 2|Gliding motility-associated protein GldE|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|SM00116|SM01091|SSF54631|SSF56176|TIGR03520 CUB95_RS08040 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 G3DSA:3.90.470.20|PF01648|SSF56214 CUB95_RS08045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003409 MORN motif G3DSA:2.20.110.10|PF02493|SM00698|SSF82185 CUB95_RS08050 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004193|IPR006047|IPR006048|IPR006407|IPR013783|IPR014756|IPR017853 1,4-alpha-glucan-branching enzyme, GlgB|Alpha-amylase/branching enzyme, C-terminal all beta|Glycoside hydrolase superfamily|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0003844|GO:0004553|GO:0005975|GO:0005978|GO:0043169 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF02806|PF02922|PIRSF000463|SM00642|SSF51011|SSF51445|SSF81296 CUB95_RS08060 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004381|IPR018193 Glycerate kinase|Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 G3DSA:3.90.1510.10|PF02595|PIRSF006078|SSF110738|TIGR00045 CUB95_RS08070 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003770 Endolytic murein transglycosylase G3DSA:3.30.160.60|MF_02065|PF02618|TIGR00247 CUB95_RS08075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 CUB95_RS08080 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 CUB95_RS08090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000529|IPR014717|IPR020814 Ribosomal protein S6|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|SSF54995|TIGR00166 CUB95_RS08095 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|SSF46911|TIGR00165 CUB95_RS08100 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009027|IPR020069|IPR020070|IPR020594 Ribosomal protein L9, C-terminal|Ribosomal protein L9, N-terminal|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|PS00651|SSF55653|SSF55658|TIGR00158 CUB95_RS08105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027417|IPR033469 CYTH-like domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:2.40.320.10|G3DSA:3.40.50.300|PF13521|SSF52540|SSF55154 CUB95_RS08110 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001288|IPR019813|IPR019814|IPR019815 Translation initiation factor 3|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal|Translation initiation factor 3, conserved site GO:0003743|GO:0006413 G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|PS00938|SSF54364|SSF55200|TIGR00168 CUB95_RS08115 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001706|IPR018265|IPR021137 Ribosomal protein L35|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00514|PF01632|PR00064|PS00936|SSF143034|TIGR00001 CUB95_RS08120 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005813|IPR035566 Ribosomal protein L20|Ribosomal protein L20 C-terminal domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|MF_00382|PD002389|PF00453|PR00062|PS00937|SSF74731|TIGR01032 CUB95_RS08125 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003029|IPR006641|IPR010994|IPR012337|IPR012340|IPR018974|IPR022967|IPR023319|IPR023323|IPR032639 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease H-like domain|RuvA domain 2-like|S1 domain|Tex protein, YqgF-like domain|Tex-like domain|Tex-like protein, HTH domain|Tex-like protein, N-terminal|YqgF/RNase H-like domain GO:0003676|GO:0006139 G3DSA:1.10.10.650|G3DSA:1.10.150.310|G3DSA:1.10.3500.10|G3DSA:2.40.50.140|PF00575|PF09371|PF12836|PF16921|SM00316|SM00732|SSF158832|SSF47781|SSF50249|SSF53098 CUB95_RS08135 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|SM00382|SSF52540 CUB95_RS08140 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008753|IPR018497|IPR024079 Metallopeptidase, catalytic domain|Peptidase M13, C-terminal domain|Peptidase M13, N-terminal domain GO:0004222|GO:0006508|GO:0008237 G3DSA:3.40.390.10|PF01431|PF05649|PR00786|SSF55486 CUB95_RS08150 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF14848|SSF47729 CUB95_RS08155 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|SM00382|SSF52540 CUB95_RS08160 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|SSF51064|SSF58014 CUB95_RS08165 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253 Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349 CUB95_RS08170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001645|IPR004101|IPR013221|IPR018109 Folylpolyglutamate synthetase|Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF08245|PIRSF001563|PS01012|SSF53244|SSF53623|TIGR01499 CUB95_RS08175 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 CUB95_RS08180 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|SSF55821|TIGR00057 CUB95_RS08185 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000644|IPR001807|IPR014743 CBS domain|Chloride channel, core|Chloride channel, voltage gated GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|G3DSA:3.10.580.10|PF00571|PF00654|PR00762|SSF54631|SSF81340 CUB95_RS08190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002376|IPR005793|IPR005794|IPR011034 Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|Methionyl-tRNA formyltransferase GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|SSF50486|SSF53328|TIGR00460 CUB95_RS08195 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003869|IPR016040 NAD(P)-binding domain|Polysaccharide biosynthesis protein, CapD-like domain G3DSA:3.40.50.720|PF02719|SSF51735 CUB95_RS08200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic PF14907 CUB95_RS08205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|SSF53383 CUB95_RS08210 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003362 Bacterial sugar transferase PF02397 CUB95_RS08215 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 CUB95_RS08220 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13579|SSF53756 CUB95_RS08225 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 CUB95_RS08230 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS08235 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.50.2000|SSF53756 CUB95_RS08240 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic PF14897 CUB95_RS08245 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 CUB95_RS08255 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.50.2000|SSF53756 CUB95_RS08260 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002495|IPR029044 Glycosyl transferase, family 8|Nucleotide-diphospho-sugar transferases GO:0016757 G3DSA:3.90.550.10|PF01501|SSF53448 CUB95_RS08265 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002797 Polysaccharide biosynthesis protein GO:0016020 PF01943 CUB95_RS08280 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001509|IPR016040|IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase GO:0003824|GO:0009226|GO:0016491|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00956|PF01370|SSF51735 CUB95_RS08295 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain G3DSA:3.30.1380.10 CUB95_RS08305 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 CUB95_RS08310 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR017867|IPR023485 Phosphotyrosine protein phosphatase I superfamily|Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 G3DSA:3.40.50.2300|PF01451|PR00719|SM00226|SSF52788 CUB95_RS08315 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005583 Peroxide stress protein YaaA MF_00652|PF03883 CUB95_RS08325 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025668 Transposase DDE domain PF13612 CUB95_RS08340 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025420|IPR027417 Domain of unknown function DUF4143|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13173|PF13635|SSF52540 CUB95_RS08350 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|SSF56281 CUB95_RS08355 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009003|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Peptidase S1, PA clan G3DSA:2.40.10.10|G3DSA:3.40.50.300|PF13365|SSF50494|SSF52540 CUB95_RS08400 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|SSF55729 CUB95_RS08405 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS08415 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000093|IPR006171|IPR015967|IPR023627|IPR023628 DNA recombination protein RecR|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|Recombination protein RecR, conserved site|TOPRIM domain GO:0003677|GO:0006281|GO:0006310 G3DSA:3.40.1360.10|MF_00017|PF02132|PF13662|PS01300|SM00493|SSF111304|TIGR00615 CUB95_RS08420 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005546 Autotransporter beta-domain G3DSA:2.40.128.130|SSF103515 CUB95_RS08425 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003790|IPR017853 Glycoside hydrolase superfamily|Glycosyl hydrolase-like 10 G3DSA:3.20.20.80|PF02638|SSF51445 CUB95_RS08430 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13404|PR00033|SM00344|SSF46785|SSF54909 CUB95_RS08435 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001566|IPR002792|IPR010280|IPR012340|IPR029063|IPR030390|IPR030391 (Uracil-5)-methyltransferase family|23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD|Nucleic acid-binding, OB-fold|RNA methyltransferase TrmA, active site|RNA methyltransferase TrmA, conserved site|S-adenosyl-L-methionine-dependent methyltransferase|TRAM domain GO:0003723|GO:0006396|GO:0008173 G3DSA:2.40.50.140|G3DSA:3.40.50.150|PF01938|PF05958|PS01230|PS01231|SSF50249|SSF53335|TIGR00479 CUB95_RS08440 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010870 Phosphate-selective porin O/P G3DSA:2.40.160.10|PF07396|SSF56935 CUB95_RS08445 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.30.470.20|SSF56059 CUB95_RS08450 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011991|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.40.50.300|PF13173|SSF46785|SSF52540 CUB95_RS08455 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002869|IPR002880|IPR009014|IPR011766|IPR011895|IPR017900|IPR019456|IPR019752|IPR029061|IPR033412 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate-flavodoxin oxidoreductase|Pyruvate-flavodoxin oxidoreductase, EKR domain|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0005506|GO:0008152|GO:0016491|GO:0016903|GO:0022900|GO:0030976|GO:0055114 G3DSA:3.30.70.20|G3DSA:3.40.50.920|G3DSA:3.40.50.970|G3DSA:3.40.920.10|G3DSA:4.10.780.10|PF01558|PF01855|PF02775|PF10371|PF13484|PF17147|PIRSF000159|PS00198|SM00890|SSF52518|SSF52922|SSF53323|SSF54862|TIGR02176 CUB95_RS08460 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002314|IPR002320|IPR004095|IPR004154|IPR012675|IPR012676|IPR012947|IPR018163 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Beta-grasp domain|TGS|TGS-like|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0016876|GO:0043039 G3DSA:3.10.20.30|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF02824|PF03129|PF07973|PR01047|SM00863|SSF52954|SSF55186|SSF55681|SSF81271|TIGR00418 CUB95_RS08465 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.10.287.1110|G3DSA:1.25.40.10|PF13181|PF13414|SM00028|SSF48452 CUB95_RS08470 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023635 Peptide deformylase G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|SSF56420|TIGR00079 CUB95_RS08475 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005227|IPR006641|IPR012337 Putative pre-16S rRNA nuclease|Ribonuclease H-like domain|YqgF/RNase H-like domain GO:0003676|GO:0006139|GO:0006364 G3DSA:3.30.420.140|MF_00651|PF03652|SM00732|SSF53098|TIGR00250 CUB95_RS08480 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 CUB95_RS08485 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024623 Uncharacterised protein family YtxH PF12732 CUB95_RS08490 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PF07332 CUB95_RS08505 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000121|IPR002192|IPR008279|IPR010121|IPR013815|IPR015813|IPR018274|IPR023151 ATP-grasp fold, subdomain 1|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate, phosphate dikinase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005524|GO:0006090|GO:0016301|GO:0016310|GO:0016772|GO:0050242 G3DSA:1.10.189.10|G3DSA:1.20.80.30|G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PIRSF000853|PS00370|PS00742|SSF51621|SSF52009|SSF56059|TIGR01828 CUB95_RS08515 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008979|IPR011635|IPR013783 CARDB domain|Galactose-binding domain-like|Immunoglobulin-like fold G3DSA:2.60.120.200|G3DSA:2.60.120.260|G3DSA:2.60.40.10|PF07705 CUB95_RS08520 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003601|IPR003602|IPR005738|IPR006171|IPR013497|IPR013825|IPR023405 DNA topoisomerase III|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|TOPRIM domain GO:0003677|GO:0003916|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.40.50.140|PF01131|PF01751|PR00417|SM00436|SM00437|SM00493|SSF56712|TIGR01056 CUB95_RS08525 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006664|IPR006665|IPR011659|IPR011990 OmpA-like domain|Outer membrane protein, bacterial|Tetratricopeptide-like helical domain|WD40-like Beta Propeller GO:0005515|GO:0009279|GO:0016021 G3DSA:1.25.40.10|G3DSA:2.130.10.150|G3DSA:3.30.1330.60|PF00691|PF07676|PR01021|SSF103088|SSF48452|SSF82171 CUB95_RS08530 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001678|IPR023267|IPR027391|IPR029063|IPR031341 RNA (C5-cytosine) methyltransferase|Ribosomal RNA small subunit methyltransferase F, N-terminal|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type|rRNA small subunit methyltransferase F, RNA-binding PUA-like domain GO:0008168 G3DSA:3.30.70.1170|G3DSA:3.40.50.150|PF01189|PF13636|PF17125|PR02008|SSF53335 CUB95_RS08535 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000398|IPR020940|IPR023451 Thymidylate synthase|Thymidylate synthase, active site|Thymidylate synthase/dCMP hydroxymethylase domain GO:0004799|GO:0006231 G3DSA:3.30.572.10|MF_00008|PF00303|PR00108|PS00091|SSF55831|TIGR03284 CUB95_RS08540 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001796|IPR012259|IPR024072 Dihydrofolate reductase|Dihydrofolate reductase domain|Dihydrofolate reductase-like domain GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 G3DSA:3.40.430.10|PF00186|PIRSF000194|PR00070|SSF53597 CUB95_RS08545 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009164|IPR029052 Fructose-1,6-bisphosphatase class 3|Metallo-dependent phosphatase-like GO:0006094|GO:0042132 G3DSA:3.60.21.10|MF_01854|PF06874|PIRSF000906|SSF56300 CUB95_RS08550 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13579|SSF53756 CUB95_RS08555 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS08560 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001048|IPR001341|IPR005260|IPR018042 Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase GO:0004072|GO:0008652|GO:0009089 G3DSA:3.30.70.260|G3DSA:3.40.1160.10|PF00696|PIRSF000726|PS00324|SSF53633|SSF55021|TIGR00657 CUB95_RS08565 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 CUB95_RS08570 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000253|IPR008984 Forkhead-associated (FHA) domain|SMAD/FHA domain GO:0005515 G3DSA:2.60.200.20|G3DSA:3.90.820.10|PF00498|SSF49879 CUB95_RS08575 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 CUB95_RS08580 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025635 Protein of unknown function DUF4293 PF14126 CUB95_RS08585 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006110|IPR012293 RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 G3DSA:3.90.940.10|PF01192|SM01409|SSF63562 CUB95_RS08590 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR017689 Outer membrane protein assembly factor BamD|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13525|SSF48452|TIGR03302 CUB95_RS08595 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432|GO:0016787 G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 CUB95_RS08605 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025631 Putative porin-10 PF14121 CUB95_RS08610 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000537|IPR004657|IPR026046 1,4-dihydroxy-2-naphthoate octaprenyltransferase|UbiA prenyltransferase domain containing protein 1|UbiA prenyltransferase family GO:0004659|GO:0009234|GO:0016021|GO:0016765|GO:0046428 MF_01937|PF01040|PIRSF005355|TIGR00751 CUB95_RS08615 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PF01966|SSF109604 CUB95_RS08620 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002125|IPR016192|IPR016193 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminase domain|Cytidine deaminase-like GO:0003824|GO:0008270|GO:0016787 G3DSA:3.40.140.10|PF00383|PS00903|SSF53927 CUB95_RS08625 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR004602|IPR027417 ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.20.1580.10|G3DSA:3.40.50.300|PF00005|SSF52540|TIGR00630 CUB95_RS08635 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00062|SSF51430 CUB95_RS08640 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeobox domain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|SM00342|SSF46689 CUB95_RS08645 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001917|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0008152|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00599|SSF53383 CUB95_RS08650 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001206|IPR005218|IPR016064|IPR017438 Diacylglycerol kinase, catalytic domain|Diacylglycerol/lipid kinase|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0008152|GO:0016301 G3DSA:3.40.50.10330|PF00781|SM00046|SSF111331|TIGR00147 CUB95_RS08655 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002052|IPR007848|IPR022882|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|S-adenosyl-L-methionine-dependent methyltransferase|tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0003676|GO:0008168|GO:0016430|GO:0032259 G3DSA:3.40.50.150|MF_01872|PF05175|PS00092|SSF53335 CUB95_RS08660 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027417|IPR027543 AAA+ ATPase domain|ATPase, AAA-type, core|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|Lon, substrate-binding domain|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon proteolytic domain|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 G3DSA:1.10.4060.10|G3DSA:1.10.8.60|G3DSA:2.30.130.40|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 CUB95_RS08665 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002616|IPR004803 tRNA-guanine transglycosylase|tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0016763|GO:0101030 G3DSA:3.20.20.105|MF_00168|PF01702|SSF51713|TIGR00430|TIGR00449 CUB95_RS08670 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005495 Permease LptG/LptF-related GO:0016021 PF03739 CUB95_RS08675 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|SM00487|SM00490|SSF52540 CUB95_RS08680 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000438|IPR029045|IPR034733 Acetyl-CoA carboxylase|Acetyl-CoA carboxylase carboxyl transferase, beta subunit|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|PF01039|PR01070|SSF52096 CUB95_RS08685 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000089|IPR001882|IPR011053 Biotin-binding site|Biotin/lipoyl attachment|Single hybrid motif G3DSA:2.40.50.100|G3DSA:2.60.420.10|PF00364|PS00188|SSF51230 CUB95_RS08695 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal|tRNA-binding arm GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|PF00587|PF02403|PIRSF001529|PR00981|SSF46589|SSF55681|TIGR00414 CUB95_RS08700 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006004|IPR008333|IPR009051|IPR017938|IPR019480|IPR023753|IPR028261 Alpha-helical ferredoxin|Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|Glutamate synthase (NADPH), homotetrameric|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0016491|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:2.10.240.10|G3DSA:2.40.30.10|G3DSA:3.40.50.720|G3DSA:3.40.50.80|G3DSA:3.50.50.60|PF00970|PF07992|PF10418|PF14691|PR00419|SSF46548|SSF51971|SSF52343|SSF63380|TIGR01316 CUB95_RS08705 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PF01048|SSF53167 CUB95_RS08710 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027417 GTP binding domain|GTP-binding protein TrmE, N-terminal|MnmE, helical domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 G3DSA:1.20.120.430|G3DSA:3.30.1360.120|MF_00379|PF01926|PF10396|PF12631|PR00326|SSF52540|TIGR00231|TIGR00450 CUB95_RS08720 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 CUB95_RS08725 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13669|SSF54593 CUB95_RS08730 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004137|IPR010048|IPR011254|IPR016099|IPR016100 Hydroxylamine reductase|Hydroxylamine reductase/Ni-containing CO dehydrogenase|Prismane, alpha-bundle|Prismane-like|Prismane-like, alpha/beta-sandwich GO:0003824|GO:0005737|GO:0016491|GO:0016661|GO:0051536|GO:0055114 G3DSA:1.20.1270.20|G3DSA:3.40.50.2030|MF_00069|PF03063|PIRSF000076|SSF56821|TIGR01703 CUB95_RS08735 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|SM00419|SSF46785|SSF51206 CUB95_RS08740 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|SSF47729 CUB95_RS08745 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PF01578 CUB95_RS08750 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007816 ResB-like domain PF05140 CUB95_RS08755 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003321|IPR011031 Cytochrome c552|Multihaem cytochrome GO:0006807|GO:0042279|GO:0042597|GO:0055114 G3DSA:1.10.1130.10|PF02335|PIRSF000243|SSF48695 CUB95_RS08760 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005126|IPR011031|IPR017571|IPR024717 Cytochrome c nitrite reductase, small subunit|Denitrification system component NapC/NirT/NrfH|Multihaem cytochrome|NapC/NirT cytochrome c, N-terminal GO:0016021|GO:0019333|GO:0020037|GO:0022900 G3DSA:1.10.3820.10|PF03264|PIRSF000013|SSF48695|TIGR03153 CUB95_RS08765 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005625|IPR015943 PepSY-associated TM protein|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF03929 CUB95_RS08770 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007438 Protein of unknown function DUF488 PF04343 CUB95_RS08780 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 CUB95_RS08785 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009351 Protein of unknown function DUF1006 PF06224 CUB95_RS08790 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF13483|SSF56281 CUB95_RS08800 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226 CUB95_RS08805 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0048037 G3DSA:2.30.110.10|PF01613|SSF50475 CUB95_RS08815 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000924|IPR001412|IPR004514|IPR011035|IPR014729|IPR020056|IPR020058|IPR020059|IPR020061 Aminoacyl-tRNA synthetase, class I, conserved site|Glutamine-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004819|GO:0005524|GO:0005737|GO:0006412|GO:0006418|GO:0006425|GO:0016876|GO:0043039 G3DSA:1.10.1160.10|G3DSA:2.40.240.10|G3DSA:3.40.50.620|PF00749|PF03950|PR00987|PS00178|SSF50715|SSF52374|TIGR00440 CUB95_RS08820 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13432|SM00028|SSF48452 CUB95_RS08825 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000943|IPR007627|IPR007630|IPR009042|IPR011991|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF00140|PF04542|PF04545|PIRSF000770|PR00046|SSF88659|SSF88946|TIGR02937 CUB95_RS08830 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011042|IPR027372 Phytase-like domain|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF13449|SSF75011 CUB95_RS08840 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006368|IPR016040 GDP-mannose 4,6-dehydratase|NAD(P)-binding domain GO:0008446|GO:0019673 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00955|PF16363|SSF51735|TIGR01472 CUB95_RS08845 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF159283|SSF53448 CUB95_RS08855 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011991|IPR019707 Winged helix-turn-helix DNA-binding domain|Winged helix-turn-helix domain (DUF2582) G3DSA:1.10.10.10|PF10771 CUB95_RS08860 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aspartate-tRNA ligase, type 1|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|SSF50249|SSF55261|SSF55681|TIGR00459 CUB95_RS08870 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF07715|PF13715|SSF49464|SSF56935 CUB95_RS08875 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF63825 CUB95_RS08880 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001647|IPR009057 DNA-binding HTH domain, TetR-type|Homeobox domain-like GO:0003677 G3DSA:1.10.10.60|PF00440|PR00455|SSF46689 CUB95_RS08885 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003538|IPR006260 Gram-negative bacterial TonB protein|TonB, C-terminal GO:0006810|GO:0015343|GO:0015891|GO:0030288|GO:0031992 G3DSA:3.30.1150.10|PF03544|PR01374|SSF74653|TIGR01352 CUB95_RS08890 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001783|IPR017938|IPR023366|IPR026017 ATP synthase subunit alpha-like domain|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.20|PF00677|PIRSF000498|SSF63380|TIGR00187 CUB95_RS08895 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004099|IPR006258|IPR012999|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|SSF51905|SSF55424|TIGR01350 CUB95_RS08900 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR023012 Aminotransferase class V domain|Probable glycine dehydrogenase (decarboxylating) subunit 2|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0004375|GO:0019464 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00713|PF00266|SSF53383 CUB95_RS08905 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015421|IPR015422|IPR015424|IPR020581|IPR023010 Glycine cleavage system P protein|Probable glycine dehydrogenase (decarboxylating) subunit 1|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0004375|GO:0006546|GO:0009116|GO:0055114 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00712|PF02347|PIRSF006815|SSF53383 CUB95_RS08910 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002930|IPR003016|IPR011053|IPR017453|IPR033753 2-oxo acid dehydrogenase, lipoyl-binding site|Glycine cleavage system H-protein|Glycine cleavage system H-protein, subgroup|Glycine cleavage system H-protein/Simiate|Single hybrid motif GO:0005960|GO:0019464 G3DSA:2.40.50.100|MF_00272|PF01597|PS00189|SSF51230|TIGR00527 CUB95_RS08915 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006222|IPR006223|IPR013977|IPR022903|IPR029043 Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain|Glycine cleavage system T protein|Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:4.10.1250.10|MF_00259|PF01571|PF08669|PIRSF006487|SSF101790|SSF103025|TIGR00528 CUB95_RS08925 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000307|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|SSF54565|TIGR00002 CUB95_RS08930 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.20.20.30|G3DSA:3.10.450.50|PF13248 CUB95_RS08935 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002053|IPR017853|IPR018077 Glycoside hydrolase superfamily|Glycoside hydrolase, family 25|Glycoside hydrolase, family 25 subgroup GO:0003796|GO:0009253|GO:0016998 G3DSA:3.20.20.80|PF01183|SM00641|SSF51445 CUB95_RS08945 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001345|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 G3DSA:3.40.50.1240|PF00300|PIRSF000709|PS00175|SM00855|SSF53254 CUB95_RS08950 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005325 Protein of unknown function DUF308, membrane PF03729 CUB95_RS08955 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000764|IPR006083|IPR026008|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase/uridine kinase|Uridine kinase|Uridine kinase-like GO:0004849|GO:0005524|GO:0008152|GO:0016301|GO:0016773 G3DSA:3.40.50.300|MF_00551|PF00485|PR00988|SSF52540|TIGR00235 CUB95_RS08960 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005122 Uracil-DNA glycosylase-like G3DSA:3.40.470.10|SSF52141 CUB95_RS08965 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|SSF56219 CUB95_RS08970 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|SSF56935 CUB95_RS08975 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008979 Galactose-binding domain-like G3DSA:2.40.50.140|G3DSA:2.60.120.260 CUB95_RS08980 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008979 Galactose-binding domain-like G3DSA:2.40.50.140|G3DSA:2.60.120.260 CUB95_RS08985 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002150|IPR027493|IPR034704 L28p-like|Ribosomal protein L31|Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00502|PF01197|PR01249|PS01143|SSF143800|TIGR00105 CUB95_RS08990 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001604|IPR020821 DNA/RNA non-specific endonuclease|Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 G3DSA:3.40.570.10|PF01223|SM00477|SM00892|SSF54060 CUB95_RS09005 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10|G3DSA:3.40.30.10 CUB95_RS09010 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10|G3DSA:3.40.30.10 CUB95_RS09015 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000889|IPR012336|IPR029760 Glutathione peroxidase|Glutathione peroxidase conserved site|Thioredoxin-like fold GO:0004602|GO:0006979|GO:0055114 G3DSA:3.40.30.10|PF00255|PIRSF000303|PR01011|PS00763|SSF52833 CUB95_RS09025 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 CUB95_RS09030 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.20.5.780 CUB95_RS09035 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS09045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007936 Virulence-associated E PF05272 CUB95_RS09050 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061 Putative DNA-binding domain G3DSA:1.10.1660.10|PF12728|SSF46955 CUB95_RS09055 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS09060 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000594 THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|SSF69572 CUB95_RS09065 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|SM00421|SSF46894 CUB95_RS09070 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 CUB95_RS09075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001584|IPR009057|IPR011991|IPR012337|IPR025246 Homeobox domain-like|Integrase, catalytic core|Ribonuclease H-like domain|Transposase IS30-like HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PF13936|SSF46689|SSF53098 CUB95_RS09090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006035|IPR020855 Ureohydrolase|Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 G3DSA:3.40.800.10|PF00491|PIRSF036979|PS01053|SSF52768 CUB95_RS09095 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF14905|SSF56935 CUB95_RS09105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS09110 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS09120 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474 CUB95_RS09125 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004567 Type II pantothenate kinase GO:0004594|GO:0005524|GO:0015937 G3DSA:3.30.420.40|PF03630|SSF53067 CUB95_RS09130 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|SM00411|SSF47729 CUB95_RS09135 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004659|IPR012340|IPR019307|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 G3DSA:2.40.50.140|PF10150|SM00316|SSF50249|TIGR00757 CUB95_RS09145 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 CUB95_RS09155 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001539|IPR013785|IPR020988 Aldolase-type TIM barrel|Peptidase U32|Peptidase U32, collagenase GO:0003824|GO:0006508|GO:0008233 G3DSA:3.20.20.70|PF01136|PF12392 CUB95_RS09160 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.40.160.60|SSF56935 CUB95_RS09170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000933|IPR016286|IPR017853 Alpha-L-fucosidase, metazoa-type|Glycoside hydrolase superfamily|Glycoside hydrolase, family 29 GO:0004560|GO:0005975|GO:0006004 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF01120|PIRSF001092|PR00741|SM00812|SSF51445 CUB95_RS09175 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 G3DSA:3.20.20.380|PF03932|SSF110395 CUB95_RS09185 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002931|IPR008964|IPR013783 Immunoglobulin-like fold|Invasin/intimin cell-adhesion fragments|Transglutaminase-like G3DSA:2.60.40.10|G3DSA:3.90.260.10|PF01841|SM00460|SSF49373|SSF54001 CUB95_RS09190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004498|IPR029063 Ribosomal protein L11 methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0006479|GO:0008276 G3DSA:3.40.50.150|MF_00735|PF06325|PIRSF000401|SSF53335 CUB95_RS09195 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002053|IPR017853|IPR018077 Glycoside hydrolase superfamily|Glycoside hydrolase, family 25|Glycoside hydrolase, family 25 subgroup GO:0003796|GO:0009253|GO:0016998 G3DSA:3.20.20.80|PF01183|SM00641|SSF51445 CUB95_RS09200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000023|IPR011183|IPR022953 ATP-dependent 6-phosphofructokinase|Phosphofructokinase domain|Pyrophosphate-dependent phosphofructokinase PfpB GO:0003872|GO:0005524|GO:0006002|GO:0006096|GO:0047334 G3DSA:1.10.10.480|G3DSA:3.40.50.450|G3DSA:3.40.50.460|MF_01980|PF00365|PIRSF005677|PR00476|SSF53784|TIGR02477 CUB95_RS09210 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|SM00563|SSF69593 CUB95_RS09215 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002508|IPR003961|IPR013783 Fibronectin type III|Immunoglobulin-like fold|N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0005515|GO:0008745|GO:0009253 G3DSA:2.60.40.10|G3DSA:3.40.630.40|PF00041|PF01520|SM00060|SSF49265|SSF53187 CUB95_RS09225 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006638|IPR007197|IPR013704|IPR013785|IPR020612|IPR022946|IPR024560 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Methylthiotransferase, conserved site|Radical SAM|Uncharacterised protein family UPF0313|Uncharacterised protein family UPF0313, C-terminal|Uncharacterised protein family UPF0313, N-terminal GO:0003824|GO:0051536|GO:0051539 G3DSA:3.20.20.70|G3DSA:3.40.50.280|MF_01251|PF04055|PF08497|PF11842|PS01278|SM00729|SSF102114|TIGR03904 CUB95_RS09230 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006439|IPR006549|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|HAD-superfamily hydrolase,subfamily IIIA|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01549|TIGR01662 CUB95_RS09240 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003593|IPR003959|IPR008921|IPR021886|IPR027417|IPR032423 AAA C-terminal domain|AAA+ ATPase domain|ATPase, AAA-type, core|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0006260 G3DSA:1.10.3710.10|G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF00004|PF12002|PF16193|PR00830|SM00382|SSF48019|SSF52540 CUB95_RS09245 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006139|IPR006140|IPR016040|IPR029752|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00670|PS00671|SSF51735|SSF52283 CUB95_RS09250 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005115 Uncharacterised domain UPF0126 PF03458 CUB95_RS09260 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001597|IPR011166|IPR015421|IPR015422|IPR015424 Aromatic amino acid beta-eliminating lyase/threonine aldolase|Beta-eliminating lyase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0006520|GO:0009072|GO:0016829|GO:0016830 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PIRSF001386|SSF53383 CUB95_RS09265 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 PF03600 CUB95_RS09270 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|SSF55811 CUB95_RS09275 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005146|IPR020825 B3/B4 tRNA-binding domain|Phenylalanyl-tRNA synthetase, B3/B4 GO:0003723|GO:0004826 G3DSA:3.50.40.10|PF03483|SM00873|SSF56037 CUB95_RS09280 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001357|IPR001679|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840 BRCT domain|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, adenylation|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:2.40.50.140|G3DSA:3.30.470.30|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03120|PIRSF001604|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091 CUB95_RS09290 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025578|IPR025640 Domain of unknown function DUF4339|Protein of unknown function DUF4359 PF14237|PF14271 CUB95_RS09295 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|SM00382|SM00962|SM00963|SSF47446|SSF52540|TIGR00959 CUB95_RS09300 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000672|IPR016040|IPR020630|IPR020631|IPR020867 NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0004488|GO:0055114 G3DSA:3.40.50.10860|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00766|PS00767|SSF51735|SSF53223 CUB95_RS09305 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001440|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.10.150.160|PF00515|SM00028|SSF48452 CUB95_RS09310 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12838|PS00198|SSF54862 CUB95_RS09315 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002880|IPR009014|IPR029061|IPR033412 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.970|PF01855|PF17147|SSF52518|SSF52922 CUB95_RS09320 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|SSF52518 CUB95_RS09325 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002869|IPR019752 Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016491|GO:0016903|GO:0055114 G3DSA:3.40.920.10|PF01558|SSF53323 CUB95_RS09330 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006665|IPR011250 OmpA-like domain|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|G3DSA:3.30.1330.60|PF00691|SSF103088 CUB95_RS09340 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002864|IPR029069 Acyl-ACP thioesterase|HotDog domain GO:0006633|GO:0016790 G3DSA:3.10.129.10|PF01643|SSF54637 CUB95_RS09345 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005474|IPR005475|IPR009014|IPR020826|IPR029061|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00801|PS00802|SM00861|SSF52518|SSF52922 CUB95_RS09350 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 G3DSA:3.40.1400.10|PF02502|PIRSF005384|SSF89623|TIGR00689 CUB95_RS09355 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001697|IPR011037|IPR015793|IPR015795|IPR015813|IPR018209 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, active site|Pyruvate kinase, barrel|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|SSF50800|SSF51621|SSF52935|TIGR01064 CUB95_RS09360 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.90.820.10 CUB95_RS09375 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005801|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0009058 G3DSA:3.60.120.10|PF00425|PR00095|SSF56322 CUB95_RS09380 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|SSF56752 CUB95_RS09395 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011991|IPR027395 Winged helix DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13601|SSF46785 CUB95_RS09405 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025324 Protein of unknown function DUF4230 PF14014 CUB95_RS09410 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025324 Protein of unknown function DUF4230 PF14014 CUB95_RS09415 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|TIGR00797 CUB95_RS09420 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR031762 Protein of unknown function DUF4738 PF15889 CUB95_RS09425 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.20.110.10|SSF82185 CUB95_RS09430 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 CUB95_RS09435 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001544|IPR005786 Aminotransferase class IV|Branched-chain amino acid aminotransferase II GO:0003824|GO:0004084|GO:0008152|GO:0009081 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PIRSF006468|SSF56752|TIGR01123 CUB95_RS09440 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 G3DSA:1.10.287.1040|PF02609|SSF116842|TIGR01280 CUB95_RS09445 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003753|IPR020579|IPR025824 Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain GO:0003676|GO:0006308|GO:0008855|GO:0009318 PF02601|PF13742|TIGR00237 CUB95_RS09450 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|SSF53649 CUB95_RS09455 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002220|IPR005263|IPR013785|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00666|SM01130|SSF51569|TIGR00674 CUB95_RS09460 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006033|IPR006034|IPR020827|IPR027473|IPR027474|IPR027475 Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|Asparaginase/glutaminase-like|L-asparaginase, C-terminal domain|L-asparaginase, N-terminal|L-asparaginase, type I GO:0004067|GO:0006520 G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PIRSF500176|PR00139|PS00144|PS00917|SM00870|SSF53774|TIGR00519 CUB95_RS09465 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531 CUB95_RS09470 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0097367|GO:1901135|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF01380|PF13522|SSF53697|SSF56235|TIGR01135 CUB95_RS09475 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR029055|IPR029057 Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase-like G3DSA:3.40.50.2020|G3DSA:3.60.20.10|SSF53271|SSF56235 CUB95_RS09480 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002474|IPR006274|IPR017926|IPR029062 Carbamoyl-phosphate synthase small subunit, N-terminal domain|Carbamoyl-phosphate synthase, small subunit|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00099|SM01097|SSF52021|SSF52317|TIGR01368 CUB95_RS09485 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Methylglyoxal synthase-like domain|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|PF02142|PF02786|PF02787|PR00098|PS00866|PS00867|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 CUB95_RS09500 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005839|IPR006467|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|MiaB-like tRNA modifying enzyme|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0006400|GO:0016740|GO:0051536|GO:0051539 G3DSA:3.40.50.2300|G3DSA:3.80.30.20|PF00919|PF04055|PS01278|SM00729|SSF102114|TIGR00089|TIGR01579 CUB95_RS09505 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS09530 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025250 Protein of unknown function DUF4199 PF13858 CUB95_RS09535 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS09540 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003374|IPR024932 ApbE-like domain|Flavin transferase ApbE GO:0017013 G3DSA:3.10.520.10|PF02424|PIRSF006268|SSF143631 CUB95_RS09545 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000595|IPR011991|IPR014710|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|SSF46785|SSF51206 CUB95_RS09550 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001567|IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal|Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 G3DSA:1.10.1370.10|G3DSA:1.20.1050.40|PF01432|SSF55486 CUB95_RS09555 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002125|IPR016192|IPR016193|IPR016473 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminase domain|Cytidine deaminase-like|Deoxycytidylate deaminase GO:0003824|GO:0004132|GO:0006220|GO:0008270|GO:0016787 G3DSA:3.40.140.10|PF00383|PIRSF006019|PS00903|SSF53927 CUB95_RS09560 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF13180|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 CUB95_RS09565 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002698 5-formyltetrahydrofolate cyclo-ligase G3DSA:3.40.50.10420|PF01812|PIRSF006806|SSF100950|TIGR02727 CUB95_RS09570 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007922 Protein of unknown function DUF721/UPF0232 PF05258 CUB95_RS09575 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001238|IPR003395|IPR018078|IPR027417 DNA-binding, RecF|DNA-binding, RecF, conserved site|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0003697|GO:0005524|GO:0006281 G3DSA:3.40.50.300|MF_00365|PF02463|PS00618|SSF52540|TIGR00611 CUB95_RS09580 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.30.10 CUB95_RS09585 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019620 Putative metal-binding protein PF10678|TIGR03853 CUB95_RS09595 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840|PR01651|TIGR00810 CUB95_RS09600 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.25.40.120 CUB95_RS09605 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 G3DSA:3.30.160.150|PF04390 CUB95_RS09610 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002078|IPR002197|IPR003593|IPR009057|IPR011991|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeobox domain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.10|G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|SM00382|SSF46689|SSF52540 CUB95_RS09625 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002575|IPR005337|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain|RapZ-like family GO:0005524 G3DSA:3.30.200.20|G3DSA:3.90.1200.10|PF01636|PF03668|SSF56112 CUB95_RS09630 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448 CUB95_RS09635 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, glutamine amidotransferase|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|PR00096|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 CUB95_RS09640 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001185|IPR019823 Large-conductance mechanosensitive channel|Large-conductance mechanosensitive channel, conserved site GO:0005216|GO:0006810|GO:0016021 MF_00115|PF01741|PR01264|PS01327|SSF81330|TIGR00220 CUB95_RS09645 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006424|IPR016040|IPR020828|IPR020829|IPR020830|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|SM00846|SSF51735|SSF55347|TIGR01534 CUB95_RS09650 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|SSF52540|TIGR00174 CUB95_RS09655 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001206|IPR016064|IPR017438 Diacylglycerol kinase, catalytic domain|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0008152|GO:0016301 G3DSA:3.40.50.10330|PF00781|SSF111331 CUB95_RS09665 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004300|IPR011330|IPR027291 Glycoside hydrolase 38/57, N-terminal domain|Glycoside hydrolase family 57, N-terminal domain|Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 G3DSA:3.20.110.10|PF03065|SSF88713 CUB95_RS09670 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 CUB95_RS09675 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008928|IPR024742|IPR032790 Glycogen debranching enzyme, C-terminal|Glycogen debranching enzyme, bacterial and archaeal type, N-terminal|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|PF06202|PF12439|SSF48208 CUB95_RS09685 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10|PF13290 CUB95_RS09690 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 PF05547|SSF55486|TIGR03296 CUB95_RS09695 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR017896|IPR017900|IPR029039 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Flavoprotein-like domain G3DSA:3.30.70.20|G3DSA:3.40.50.360|PF13237|PS00198|SSF52218|SSF54862 CUB95_RS09700 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000200|IPR013783|IPR025896 Immunoglobulin-like fold|Peptidase C10, streptopain|Spi protease inhibitor GO:0006508|GO:0008234 G3DSA:2.60.40.10|G3DSA:3.90.70.10|PD004169|PF01640|PF13734|PR00797|SSF54001 CUB95_RS09705 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000150|IPR006379|IPR023214 Cof family|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB GO:0016787 G3DSA:3.40.50.1000|PF08282|PS01228|PS01229|SSF56784|TIGR00099|TIGR01484 CUB95_RS09710 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|PF01545|SSF161111|TIGR01297 CUB95_RS09715 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin-like phospholipase domain GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 CUB95_RS09720 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PF02535 CUB95_RS09725 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001584|IPR009057|IPR011991|IPR012337|IPR025246 Homeobox domain-like|Integrase, catalytic core|Ribonuclease H-like domain|Transposase IS30-like HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PF13936|SSF46689|SSF53098 CUB95_RS09735 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|TIGR00797 CUB95_RS09745 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012947|IPR018163 Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0005524|GO:0016876|GO:0043039 G3DSA:3.30.980.10|PF07973|SM00863|SSF55186 CUB95_RS09750 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006047|IPR017853 Glycoside hydrolase superfamily|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|SM00642|SSF51011|SSF51445 CUB95_RS09755 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004410|IPR014043|IPR016035|IPR016036|IPR020801|IPR024925 Acyl transferase|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl CoA-acyl carrier protein transacylase, FabD-type|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0004314|GO:0008152 G3DSA:3.40.366.10|PF00698|PIRSF000446|SM00827|SSF52151|SSF55048|TIGR00128 CUB95_RS09760 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001406|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|SSF55120|TIGR00071 CUB95_RS09765 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004477|IPR025405 ComEC/Rec2-related protein|Domain of unknown function DUF4131 PF03772|PF13567|TIGR00360 CUB95_RS09780 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025921 HmuY protein PF14064 CUB95_RS09785 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF07715|PF13715|SSF49464|SSF56935 CUB95_RS09790 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003672 CobN/magnesium chelatase GO:0009058 PF02514 CUB95_RS09800 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618 CUB95_RS09805 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018676 Protein of unknown function DUF2149 PF09919 CUB95_RS09820 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 G3DSA:3.60.60.10|PF03577 CUB95_RS09825 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 CUB95_RS09835 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025381 Domain of unknown function DUF4296 PF14129 CUB95_RS09840 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781 CUB95_RS09845 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic SSF109635 CUB95_RS09850 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002300|IPR002301|IPR009008|IPR009080|IPR013155|IPR014729|IPR023586 Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 2|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.10|G3DSA:3.40.50.620|MF_02003|PF00133|PF08264|PR00984|SSF47323|SSF50677|SSF52374|TIGR00392 CUB95_RS09855 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027375 DKNYY family PF13644 CUB95_RS09860 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250|IPR025665 Outer membrane protein beta-barrel domain|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13568 CUB95_RS09865 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025112 Putative carbohydrate metabolism domain PF13201 CUB95_RS09870 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011204 Virulence protein RhuM-like PF13310|PIRSF015268 CUB95_RS09875 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR021280 Protein of unknown function DUF2723|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF11028 CUB95_RS09880 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 CUB95_RS09885 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004453|IPR009051|IPR013542|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Domain of unknown function DUF1730|Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491|GO:0051536 G3DSA:3.30.70.20|PF08331|PF13484|PS00198|SSF46548|TIGR00276 CUB95_RS09890 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000200|IPR025896|IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like|Peptidase C10, streptopain|Spi protease inhibitor GO:0006508|GO:0008234 G3DSA:2.60.40.1270|G3DSA:3.80.10.10|G3DSA:3.90.70.10|PD004169|PF01640|PF13306|PF13734|PR00797|SSF54001 CUB95_RS09895 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008979|IPR011628|IPR013783 Cleaved adhesin|Galactose-binding domain-like|Immunoglobulin-like fold G3DSA:2.60.120.260|G3DSA:2.60.40.10|PF07675 CUB95_RS09910 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005240 Protein of unknown function DUF389 PF04087|TIGR00341 CUB95_RS09915 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008979|IPR011044|IPR013783|IPR015943 Galactose-binding domain-like|Immunoglobulin-like fold|Quinoprotein amine dehydrogenase, beta chain-like|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|G3DSA:2.60.120.260|G3DSA:2.60.40.10|SSF49785|SSF50969 CUB95_RS09955 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002560|IPR029261|IPR032877 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain|Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PF01610|PF13542|PF14690 CUB95_RS09960 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012337|IPR013520|IPR014017|IPR027417|IPR034739 Exonuclease, RNase T/DNA polymerase III|P-loop containing nucleoside triphosphate hydrolase|Ribonuclease H-like domain|UvrD-like DNA helicase, C-terminal|UvrD/AddA helicase, N-terminal GO:0003676|GO:0005524|GO:0016787 G3DSA:3.30.420.10|G3DSA:3.40.50.300|PF00580|PF00929|PF13361|SM00479|SSF52540|SSF53098 CUB95_RS09970 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001375|IPR002470|IPR023302|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Peptidase S9A, N-terminal domain|Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508|GO:0008236|GO:0070008 G3DSA:2.130.10.120|G3DSA:3.40.50.1820|PF00326|PF02897|PR00862|SSF50993|SSF53474 CUB95_RS09975 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025875|IPR026444|IPR032675 Leucine rich repeat 4|Leucine-rich repeat domain, L domain-like|Secretion system C-terminal sorting domain G3DSA:3.80.10.10|PF12799|SSF52058|TIGR04183 CUB95_RS09985 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001270|IPR001943|IPR003593|IPR003959|IPR004176|IPR018368|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|P-loop containing nucleoside triphosphate hydrolase|UVR domain GO:0005515|GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02151|PF02861|PF07724|PF10431|PR00300|PS00870|SM00382|SM01086|SSF52540|SSF81923 CUB95_RS09995 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025366 Protein of unknown function DUF4270 PF14092 CUB95_RS10000 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013534 Starch synthase, catalytic domain PF08323|SSF53756 CUB95_RS10005 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003721|IPR014729 Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0004592|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|SSF52374|TIGR00018 CUB95_RS10010 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003190|IPR009010 Aspartate decarboxylase|Aspartate decarboxylase-like domain GO:0004068|GO:0006523 G3DSA:2.40.40.20|MF_00446|PD009294|PF02261|PIRSF006246|SSF50692|TIGR00223 CUB95_RS10015 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014825|IPR016024 Armadillo-type fold|DNA alkylation repair enzyme GO:0005488 G3DSA:1.20.1660.10|G3DSA:1.25.40.290|PF08713|SSF48371 CUB95_RS10020 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|SSF55961 CUB95_RS10025 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000305 GIY-YIG nuclease superfamily G3DSA:3.40.1440.10|PF01541|SSF82771 CUB95_RS10035 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001684|IPR018261 Ribosomal protein L27|Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|PS00831|SSF110324|TIGR00062 CUB95_RS10040 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001787|IPR028909 Ribosomal protein L21|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|SSF141091|TIGR00061 CUB95_RS10045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010846 Protein of unknown function DUF1460 G3DSA:1.10.3670.10|G3DSA:2.30.260.10|PF07313|SSF54001 CUB95_RS10050 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025535 Protein of unknown function DUF4421 PF14391 CUB95_RS10055 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|SSF51735|SSF55347 CUB95_RS10060 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019026|IPR032625 Peptidase M64, IgA|Peptidase M64, N-terminal PF09471|PF16217 CUB95_RS10065 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004316 SWEET sugar transporter GO:0016021 PF03083 CUB95_RS10070 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000890|IPR011245|IPR023865 Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site|Butyrate kinase GO:0005524|GO:0005622|GO:0005737|GO:0008152|GO:0016301|GO:0016310|GO:0016774|GO:0047761 G3DSA:3.30.420.40|MF_00542|PF00871|PIRSF036458|PR00471|PS01075|SSF53067|TIGR02707 CUB95_RS10075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002505|IPR012147 Phosphate acetyl/butaryl transferase|Phosphate acetyl/butyryltransferase GO:0008152|GO:0016746 G3DSA:3.40.50.10750|G3DSA:3.40.50.2300|PF01515|PIRSF000428|SSF53659 CUB95_RS10080 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000494|IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like|Receptor L-domain G3DSA:3.80.10.10|G3DSA:3.80.20.20|PF13306|SSF52058 CUB95_RS10090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012657|IPR026354 23S rRNA-intervening sequence protein|Four helix bundle suffix domain G3DSA:1.20.1440.60|SSF158446|TIGR02436|TIGR04258 CUB95_RS10095 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002569|IPR002579|IPR011057 Mss4-like|Peptide methionine sulphoxide reductase MrsB|Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0033743|GO:0055114 G3DSA:2.170.150.20|G3DSA:3.30.1060.10|MF_01400|MF_01401|PF01625|PF01641|SSF51316|SSF55068|TIGR00357|TIGR00401 CUB95_RS10100 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008331|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|SSF47240 CUB95_RS10105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002744|IPR019591|IPR027417|IPR033756|IPR034904 Fe-S cluster assembly domain|Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35|MIP18 family-like|Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.300.130|G3DSA:3.40.50.300|MF_02040|PF01883|PF10609|SSF117916|SSF52540 CUB95_RS10115 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010985|IPR013321 Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|SSF47598 CUB95_RS10120 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001107 Band 7 domain PF01145|SM00244|SSF117892 CUB95_RS10125 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010282|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|Uncharacterised protein family HutD/Ves G3DSA:2.60.120.10|PF05962|SSF51182 CUB95_RS10145 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001478|IPR005151|IPR029045 ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|SM00245|SSF50156|SSF52096 CUB95_RS10160 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|SM00563|SSF69593 CUB95_RS10165 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 CUB95_RS10170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002195|IPR004722|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Dihydroorotase|Dihydroorotase, conserved site|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0004151|GO:0006221|GO:0016787|GO:0016810|GO:0016812|GO:0046872 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PS00483|SSF51338|SSF51556|TIGR00857 CUB95_RS10175 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025380 Domain of unknown function DUF4369 PF14289 CUB95_RS10185 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PF04977 CUB95_RS10190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001270|IPR003593|IPR008921|IPR012763|IPR022754|IPR027417 AAA+ ATPase domain|ClpA/B family|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF12169|PF13177|PR00300|SM00382|SSF48019|SSF52540|TIGR02397 CUB95_RS10200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011703|IPR027417 ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|SSF52540 CUB95_RS10205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002035|IPR002881 Domain of unknown function DUF58|von Willebrand factor, type A G3DSA:3.40.50.410|PF01882|SSF53300 CUB95_RS10215 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002035|IPR024163 Aerotolerance regulator, N-terminal|von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|PF07584|SM00327|SSF53300 CUB95_RS10220 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002035|IPR024163 Aerotolerance regulator, N-terminal|von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|PF07584|SM00327|SSF53300 CUB95_RS10225 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001440|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|SM00028|SSF48452 CUB95_RS10230 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001452|IPR011990|IPR019734|IPR025738|IPR027363 Aerotolerance-related protein BatD|Methylthioribose-1-phosphate isomerase-like, N-terminal domain|SH3 domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.20.120.420|G3DSA:1.25.40.10|G3DSA:2.30.30.40|PF13432|PF13584|SM00028|SSF48452|SSF50044 CUB95_RS10235 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SM00014|SSF48317 CUB95_RS10240 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 G3DSA:3.40.1780.10|PF02547|SSF111337 CUB95_RS10245 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002625|IPR018598 Domain of unknown function DUF2027|Smr domain G3DSA:2.60.40.1600|PF01713|PF09640|SSF158949 CUB95_RS10250 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003010|IPR003694|IPR014445|IPR014729|IPR022310 Carbon-nitrogen hydrolase|Glutamine-dependent NAD(+) synthetase|NAD(+) synthetase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0006807|GO:0009435|GO:0016810 G3DSA:3.40.50.620|G3DSA:3.60.110.10|PF00795|PF02540|PIRSF006630|SSF52402|SSF56317|TIGR00552 CUB95_RS10260 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012332 P22 tailspike C-terminal domain-like G3DSA:2.160.20.20 CUB95_RS10270 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002505|IPR012188|IPR012301|IPR012302|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|NAD(P)-binding domain|NAD(P)-dependent malic enzyme|Phosphate acetyl/butaryl transferase GO:0004470|GO:0004471|GO:0006108|GO:0008152|GO:0016746|GO:0046872|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.720|G3DSA:3.40.718.10|PF00390|PF01515|PF03949|PIRSF036684|SM00919|SM01274|SSF51735|SSF53223|SSF53659 CUB95_RS10275 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001647|IPR009057|IPR011075 DNA-binding HTH domain, TetR-type|Homeobox domain-like|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|PF00440|PR00455|SSF46689|SSF48498 CUB95_RS10280 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0015969 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 CUB95_RS10285 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025393|IPR029044 Domain of unknown function DUF4301|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF14134|SSF53448 CUB95_RS10295 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008979|IPR011042|IPR013783|IPR026444 Galactose-binding domain-like|Immunoglobulin-like fold|Secretion system C-terminal sorting domain|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.10|G3DSA:2.120.10.30|G3DSA:2.60.120.260|G3DSA:2.60.40.10|SSF82171|TIGR04183 CUB95_RS10320 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007433 Protein of unknown function DUF481 G3DSA:2.40.160.40|PF04338 CUB95_RS10325 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.20.120.330 CUB95_RS10355 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.50.1460 CUB95_RS10365 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001150|IPR004184|IPR005949|IPR019777 Formate C-acetyltransferase glycine radical, conserved site|Formate acetyltransferase|Glycine radical domain|Pyruvate formate lyase domain GO:0003824|GO:0005737|GO:0005975|GO:0008152|GO:0008861 G3DSA:3.20.70.20|PF01228|PF02901|PIRSF000379|PS00850|SSF51998|TIGR01255 CUB95_RS10370 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001989|IPR007197|IPR012838|IPR012839 Organic radical enzyme activase|Pyruvate formate-lyase activating enzyme|Radical SAM|Radical-activating enzyme, conserved site GO:0003824|GO:0016491|GO:0043365|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.80.30.10|PF04055|PF13353|PIRSF000371|PS01087|SSF102114|TIGR02493 CUB95_RS10375 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|SSF54637 CUB95_RS10380 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011204 Virulence protein RhuM-like PF13310 CUB95_RS10385 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003251|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Rubrerythrin GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1260.10|G3DSA:2.20.28.10|PF02915|SSF47240|SSF57802 CUB95_RS10395 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014191|IPR023404 Anaerobic ribonucleoside-triphosphate reductase activator|Radical SAM, alpha/beta horseshoe G3DSA:3.80.30.20|PF13353|SSF102114|TIGR02826 CUB95_RS10400 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005144|IPR012833 ATP-cone domain|Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 G3DSA:2.20.25.10|G3DSA:3.20.70.20|PF03477|PF13597|SSF51998|TIGR02827 CUB95_RS10405 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin-like phospholipase domain GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 CUB95_RS10410 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001460|IPR012338 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|PF00905|SSF56601 CUB95_RS10415 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003373|IPR005225|IPR007167|IPR008988|IPR011640|IPR011642|IPR027417|IPR030389 FeoB-type guanine nucleotide-binding (G) domain|Ferrous iron transport protein B|Ferrous iron transport protein B, C-terminal|Ferrous iron transporter FeoA domain|Nucleoside transporter/FeoB GTPase, Gate domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcriptional repressor, C-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021|GO:0046914 G3DSA:2.30.30.90|G3DSA:3.40.50.300|PF02421|PF04023|PF07664|PF07670|SM00899|SSF50037|SSF52540|TIGR00231|TIGR00437 CUB95_RS10420 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004630|IPR018383 Uncharacterised protein family UPF0324, bacteria|Uncharacterised protein family UPF0324, prokaryote GO:0016021 PF03601|TIGR00698 CUB95_RS10435 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PF13488|PR01021|SSF103088 CUB95_RS10440 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002314|IPR004154|IPR004499|IPR016061|IPR017449 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Proline-tRNA ligase, class II, C-terminal|Proline-tRNA ligase, class IIa, archaeal-type|Prolyl-tRNA synthetase, class II GO:0000166|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.110.30|G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_01571|PF00587|PF03129|PF09180|SM00946|SSF52954|SSF55681|SSF64586|TIGR00408 CUB95_RS10455 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001537|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|SSF55315|SSF75217 CUB95_RS10460 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000184 Bacterial surface antigen (D15) GO:0019867 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF01103 CUB95_RS10465 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|SM00849|SSF56281 CUB95_RS10470 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.30.497.10|SSF48452 CUB95_RS10475 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 CUB95_RS10480 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003593|IPR004504|IPR014721|IPR020568|IPR027417 AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01498|PF13481|PF13541|PR01874|SM00382|SSF52540|SSF54211|TIGR00416 CUB95_RS10490 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524|IPR032781 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PF16326|PS00211|SM00382|SSF52540 CUB95_RS10495 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006073|IPR019987|IPR027417 GTP binding domain|GTP-binding protein, ribosome biogenesis, YsxC|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00321|PF01926|SSF52540|TIGR03598 CUB95_RS10500 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066|IPR024086 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucosamine mutase, archaeal type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|SSF53738|SSF55957|TIGR03990 CUB95_RS10505 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032252 Protein of unknown function DUF4827 PF16109 CUB95_RS10510 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|SSF56349 CUB95_RS10515 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969|IPR012910 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF07715|PF13715|SSF49464|SSF56935 CUB95_RS10520 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018527|IPR024922|IPR024935 Rubredoxin|Rubredoxin domain|Rubredoxin, iron-binding site GO:0005506|GO:0009055|GO:0046872 G3DSA:2.20.28.10|PF00301|PIRSF000071|PR00163|PS00202|SSF57802 CUB95_RS10525 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008136 CinA, C-terminal G3DSA:3.90.950.20|PF02464|SSF142433|TIGR00199 CUB95_RS10530 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000905|IPR017860|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|Peptidase M22, conserved site|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|PS01016|SSF53067|TIGR00329|TIGR03723 CUB95_RS10535 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000994|IPR001714|IPR002467 Peptidase M24|Peptidase M24, methionine aminopeptidase|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|SSF55920|TIGR00500 CUB95_RS10540 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|SSF52058 CUB95_RS10550 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000014|IPR012312 Haemerythrin-like|PAS domain G3DSA:1.10.3910.10|G3DSA:1.20.120.520|G3DSA:3.30.450.20|PF01814|PF13596|SSF55785 CUB95_RS10565 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250|IPR025665 Outer membrane protein beta-barrel domain|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13568 CUB95_RS10570 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001160|IPR002933 Peptidase M20|Peptidase M20C, Xaa-His dipeptidase GO:0006508|GO:0008152|GO:0016787 G3DSA:3.40.630.10|PF01546|PIRSF016599|PR00934|SSF53187|TIGR01893 CUB95_RS10580 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|SM00935|SSF111384 CUB95_RS10595 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|SSF53955|SSF56601 CUB95_RS10600 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002082|IPR006130|IPR006131|IPR006132 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|SSF53671|TIGR00670 CUB95_RS10605 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002801|IPR020542|IPR020545 Aspartate carbamoyltransferase regulatory subunit, C-terminal|Aspartate carbamoyltransferase regulatory subunit, N-terminal|Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 G3DSA:2.30.30.20|G3DSA:3.30.70.140|G3DSA:3.90.820.10|MF_00002|PD006194|PF01948|PF02748|SSF54893|SSF57825|TIGR00240 CUB95_RS10610 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0003824|GO:0004372|GO:0006545|GO:0030170|GO:0035999 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|SSF53383 CUB95_RS10620 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007452 Translocation and assembly module TamB PF04357 CUB95_RS10625 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008703|IPR022615 Na(+)-translocating NADH-quinone reductase subunit A|Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0006814|GO:0016655|GO:0055114 G3DSA:2.40.50.100|MF_00425|PF05896|PF11973|TIGR01936 CUB95_RS10630 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004338|IPR010966 NADH-quinone reductase NQR2/RnfD|Na(+)-translocating NADH-quinone reductase subunit B GO:0006810|GO:0009276|GO:0010181|GO:0016020|GO:0016021|GO:0016655|GO:0022904|GO:0055114 MF_00426|PF03116|PIRSF016055|TIGR01937 CUB95_RS10635 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007329|IPR010204 FMN-binding|Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016020|GO:0016021|GO:0016655|GO:0055114 MF_00427|PF04205|PIRSF009437|SM00900|TIGR01938 CUB95_RS10640 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003667|IPR011292 Na(+)-translocating NADH-quinone reductase subunit D|Rnf-Nqr subunit, membrane protein GO:0016020|GO:0016655|GO:0055114 MF_00428|PF02508|PIRSF006102|TIGR01939 CUB95_RS10645 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003667|IPR010967 Na(+)-translocating NADH-quinone reductase subunit E|Rnf-Nqr subunit, membrane protein GO:0009276|GO:0016020|GO:0016021|GO:0016655|GO:0022904|GO:0055114 MF_00429|PF02508|PIRSF006102|TIGR01940 CUB95_RS10650 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001041|IPR001433|IPR001709|IPR008333|IPR010205|IPR012675|IPR017938 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|Na(+)-translocating NADH-quinone reductase subunit F|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0006814|GO:0009055|GO:0016021|GO:0016491|GO:0016655|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|MF_00430|PF00111|PF00175|PF00970|PR00371|SSF52343|SSF54292|SSF63380|TIGR01941 CUB95_RS10665 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025460 Protein of unknown function DUF4280 PF14107 CUB95_RS10675 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.40.50.260|G3DSA:3.55.50.10|PF05954|SSF69255|SSF69279|SSF69349 CUB95_RS10685 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410 CUB95_RS10690 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000601|IPR013783|IPR022409 Immunoglobulin-like fold|PKD domain|PKD/Chitinase domain G3DSA:2.60.40.10|PF00801|SM00089|SSF49299 CUB95_RS10695 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic PF17561 CUB95_RS10710 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR035177 Protein of unknown function DUF5467 PF17555 CUB95_RS10720 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF07724|PF10431|PR00300|SM00382|SM01086|SSF52540|SSF81923 CUB95_RS10725 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic PF17543 CUB95_RS10730 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007048 GpW/Gp25/anti-adapter protein IraD G3DSA:3.10.450.40|PF04965|SSF160719 CUB95_RS10740 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.40.50.260|G3DSA:3.55.50.10|PF05954|SSF69255|SSF69279|SSF69349 CUB95_RS10755 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 CUB95_RS10760 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014983|IPR015002 Domain of unknown function DUF1851|GAD-related PF08887|PF08906 CUB95_RS10775 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR035576 Protein of unknown function DUF5458 PF17541 CUB95_RS10780 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 CUB95_RS10795 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR009042|IPR011991|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF00140|PF04539|PF04542|PF04545|PIRSF000770|PR00046|SSF88659|SSF88946|TIGR02937 CUB95_RS10800 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000241|IPR002052|IPR004114|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Putative RNA methylase domain|S-adenosyl-L-methionine-dependent methyltransferase|THUMP domain GO:0003676|GO:0003723|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF01170|PF02926|PS00092|PS01261|SM00981|SSF53335 CUB95_RS10805 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001375|IPR002469|IPR029058 Alpha/Beta hydrolase fold|Dipeptidylpeptidase IV, N-terminal domain|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 G3DSA:2.140.10.30|G3DSA:3.40.50.1820|PF00326|PF00930|SSF53474|SSF82171 CUB95_RS10810 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000115|IPR011054|IPR013815|IPR016185|IPR020560|IPR020561|IPR020562 ATP-grasp fold, subdomain 1|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, N-terminal|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 CUB95_RS10820 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011415|IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain|Predicted bifunctional spore maturation protein, fused SpmA/SpmB PF07670|PIRSF036542 CUB95_RS10825 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002797|IPR029303 Polysaccharide biosynthesis protein|Polysaccharide biosynthesis protein, C-terminal domain GO:0016020 PF01943|PF14667 CUB95_RS10830 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009003|IPR019500 Peptidase S1, PA clan|Peptidase S46 GO:0008239|GO:0070009 G3DSA:2.40.10.10|PF10459|SSF50494 CUB95_RS10845 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 G3DSA:3.20.130.10|PF05683|SSF117457|TIGR00723 CUB95_RS10850 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PF05681|TIGR00722 CUB95_RS10855 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.980.10|G3DSA:3.40.50.300|SSF52540 CUB95_RS10860 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025496 Protein of unknown function DUF4387 PF14330 CUB95_RS10865 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010839 Acyclic terpene utilisation PF07287 CUB95_RS10870 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006395|IPR022662|IPR022665|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Methylaspartate ammonia-lyase|Methylaspartate ammonia-lyase, C-terminal|Methylaspartate ammonia-lyase, N-terminal GO:0050096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF05034|PF07476|PIRSF017107|SSF51604|SSF54826|TIGR01502 CUB95_RS10875 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006396|IPR014714|IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic|Glutamate mutase E subunit, C-terminal domain|Glutamate mutase epsilon subunit GO:0003824|GO:0008152|GO:0016866|GO:0019670|GO:0031419|GO:0050097 G3DSA:3.20.20.240|G3DSA:3.90.970.10|MF_01923|PF06368|PIRSF001495|SSF51703|TIGR01503 CUB95_RS10880 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006230 Protein MutL G3DSA:3.30.420.40|PF13941|PIRSF004729|SSF53067|TIGR01319 CUB95_RS10885 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006158|IPR006394 Cobalamin (vitamin B12)-binding domain|Glutamate mutase sigma subunit GO:0016866|GO:0019670|GO:0031419|GO:0046872 G3DSA:3.40.50.280|MF_00526|PF02310|SSF52242|TIGR01501 CUB95_RS10895 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002901|IPR018392 LysM domain|Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 G3DSA:1.10.530.10|G3DSA:3.10.350.10|PF01476|PF01832|SM00047|SM00257|SSF54106 CUB95_RS10905 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PIRSF002111|PR00681|SM00316|SSF50249 CUB95_RS10915 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|SSF74982|TIGR00086 CUB95_RS10920 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025402 Domain of unknown function DUF4375 PF14300 CUB95_RS10925 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000525|IPR011991 Initiator Rep protein|Winged helix-turn-helix DNA-binding domain GO:0003887|GO:0005727|GO:0006270 G3DSA:1.10.10.10|PF01051|SSF46785 CUB95_RS10935 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448 CUB95_RS10940 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001667 DDH domain G3DSA:3.90.1640.10|PF01368|SSF64182 CUB95_RS10945 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000194|IPR003593|IPR004665|IPR011113|IPR011129|IPR012340|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock domain|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, RNA-binding domain|Transcription termination factor Rho GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|SM00357|SM00382|SSF50249|SSF52540|TIGR00767 CUB95_RS10950 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004644|IPR005130|IPR005131|IPR029009 Allosteric substrate binding domain|Iron-sulphur-dependent L-serine dehydratase single chain form|Serine dehydratase beta chain|Serine dehydratase-like, alpha subunit GO:0003941|GO:0006094|GO:0051539 G3DSA:1.10.4100.10|G3DSA:3.30.1330.90|PF03313|PF03315|SSF143548|TIGR00720 CUB95_RS10955 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023346 Lysozyme-like domain G3DSA:1.10.530.10|SSF53955 CUB95_RS10965 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003742|IPR029026|IPR029028 Alpha/beta knot methyltransferases|RNA methyltransferase RlmH|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0005737|GO:0006364|GO:0008168 G3DSA:3.40.1280.10|MF_00658|PF02590|PIRSF004505|SSF75217 CUB95_RS10970 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027890 Protein of unknown function DUF4491 PF14898 CUB95_RS10975 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site GO:0000287|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|SSF53738|SSF55957 CUB95_RS10980 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PS00170|SSF50891 CUB95_RS10985 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|SM00833|SSF52540|SSF90002 CUB95_RS10990 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322 CUB95_RS10995 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 PF01654|PIRSF006446 CUB95_RS11000 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027853 Protein of unknown function DUF4492 PF14899 CUB95_RS11005 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|SSF56954 CUB95_RS11010 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011053|IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain|Single hybrid motif G3DSA:1.10.287.470|G3DSA:1.20.1600.10|G3DSA:3.90.1170.30|PF16576|SSF51230 CUB95_RS11015 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.1710.10|PF12698 CUB95_RS11020 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.1710.10|PF12698 CUB95_RS11030 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PIRSF000126|PR00080|PR00081|PS00061|SSF51735 CUB95_RS11040 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006145|IPR006224|IPR020103 Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.2350.10|PF00849|PS01129|SSF55120 CUB95_RS11045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002347|IPR011284|IPR016040|IPR020904 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0004316|GO:0006633|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735|TIGR01830 CUB95_RS11050 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001647|IPR009057 DNA-binding HTH domain, TetR-type|Homeobox domain-like GO:0003677 G3DSA:1.10.10.60|PF00440|PR00455|SSF46689 CUB95_RS11060 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025590 Protein of unknown function DUF4348 PF14254 CUB95_RS11065 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002319|IPR004188|IPR004529|IPR010978|IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit|tRNA-binding arm GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|SSF46589|SSF55681|TIGR00468 CUB95_RS11075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|SSF51161 CUB95_RS11080 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0047429 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972|TIGR00172 CUB95_RS11085 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005151|IPR029045 ClpP/crotonase-like domain|Tail specific protease GO:0006508|GO:0008236 G3DSA:3.90.226.10|PF03572|SSF52096 CUB95_RS11090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010023|IPR023214 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase|HAD-like domain GO:0019143 G3DSA:3.40.50.1000|PF08282|PIRSF006118|SSF56784|TIGR01670 CUB95_RS11095 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008927|IPR016040|IPR018931|IPR019665 6-phosphogluconate dehydrogenase C-terminal domain-like|Domain of unknown function DUF2520|NAD(P)-binding domain|Putative oxidoreductase/dehydrogenase, Rossmann-like domain GO:0055114 G3DSA:1.10.1040.20|G3DSA:3.40.50.720|PF10727|PF10728|SSF48179|SSF51735 CUB95_RS11100 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13480|SSF55729 CUB95_RS11105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 CUB95_RS11110 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003329|IPR004528|IPR029044 3-deoxy-D-manno-octulosonate cytidylyltransferase|Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0005737|GO:0008690 G3DSA:3.90.550.10|MF_00057|PF02348|SSF53448|TIGR00466 CUB95_RS11120 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000897|IPR003593|IPR004390|IPR013822|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY GO:0005525|GO:0006614 G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02881|PS00300|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064 CUB95_RS11125 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005839|IPR005840|IPR006638|IPR007197|IPR013785|IPR013848|IPR020612 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Radical SAM|Ribosomal protein S12 methylthiotransferase RimO GO:0003824|GO:0005737|GO:0006400|GO:0016740|GO:0018339|GO:0051536|GO:0051539 G3DSA:2.40.50.140|G3DSA:3.20.20.70|MF_01865|PF00919|PF04055|PS01278|SM00729|SSF102114|TIGR00089|TIGR01125 CUB95_RS11130 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|SM00411|SSF47729 CUB95_RS11135 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|SM00411|SSF47729 CUB95_RS11150 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002176|IPR012337|IPR020563 Crossover junction endodeoxyribonuclease RuvC|Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site|Ribonuclease H-like domain GO:0003676|GO:0004520|GO:0006281|GO:0006310|GO:0008821 G3DSA:3.30.420.10|MF_00034|PF02075|PR00696|PS01321|SSF53098|TIGR00228 CUB95_RS11155 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 CUB95_RS11160 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|PIRSF003078|SSF53335|TIGR00138 CUB95_RS11165 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021729 Domain of unknown function DUF3298 G3DSA:3.30.565.40|G3DSA:3.90.640.20 CUB95_RS11170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|SSF56784|TIGR01509|TIGR01549 CUB95_RS11175 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|SSF51621|TIGR00222 CUB95_RS11180 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007329|IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain|FMN-binding GO:0010181|GO:0016020 PF04205|PF12801|SM00900 CUB95_RS11185 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003698|IPR004143|IPR004562|IPR006638|IPR007197|IPR019491|IPR023404 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Elongator protein 3/MiaB/NifB|Lipoate protein ligase, C-terminal|Lipoyl synthase|Lipoyltransferase/lipoate-protein ligase|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0006464|GO:0009107|GO:0009249|GO:0016992|GO:0051536|GO:0051539 G3DSA:3.30.390.50|G3DSA:3.30.930.10|G3DSA:3.80.30.20|MF_00206|PF03099|PF04055|PF10437|SM00729|SSF102114|SSF55681|SSF82649|TIGR00510|TIGR00545 CUB95_RS11200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002180|IPR034964 Lumazine synthase|Lumazine/riboflavin synthase GO:0000906|GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|SSF52121|TIGR00114 CUB95_RS11205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006597|IPR011990|IPR018704 Sel1-like repeat|Tetratricopeptide repeat-like domain|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF09976|SM00671|SSF48452 CUB95_RS11215 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000103|IPR005982|IPR008255|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|SSF51905|TIGR01292 CUB95_RS11220 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002624|IPR027417|IPR031314 Deoxynucleoside kinase|Deoxynucleoside kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006139|GO:0019206 G3DSA:3.40.50.300|PF01712|PIRSF000705|SSF52540 CUB95_RS11225 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002624|IPR027417|IPR031314 Deoxynucleoside kinase|Deoxynucleoside kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006139|GO:0019206 G3DSA:3.40.50.300|PF01712|PIRSF000705|SSF52540 CUB95_RS11230 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002591|IPR017849|IPR017850|IPR026263 Alkaline phosphatase, prokaryotic|Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824|GO:0004035|GO:0008152 G3DSA:3.40.720.10|PF01663|PIRSF031924|SSF53649 CUB95_RS11235 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012349|IPR024747 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-related GO:0048037 G3DSA:2.30.110.10|PF12900|SSF50475 CUB95_RS11240 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001567|IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal|Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 G3DSA:1.10.1370.10|G3DSA:1.20.1050.40|PF01432|SSF55486 CUB95_RS11250 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|SSF53187 CUB95_RS11260 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.60.40.1120|PF13715 CUB95_RS11265 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002587|IPR013021|IPR016040 Myo-inositol-1-phosphate synthase|Myo-inositol-1-phosphate synthase, GAPDH-like|NAD(P)-binding domain GO:0004512|GO:0006021|GO:0008654 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01658|PF07994|PIRSF015578|SSF51735|SSF55347 CUB95_RS11270 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01549 CUB95_RS11275 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066 CUB95_RS11280 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.30.470.20|SSF56059 CUB95_RS11285 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448 CUB95_RS11295 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 CUB95_RS11300 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005901 GLPGLI family protein PF09697|TIGR01200 CUB95_RS11305 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005901 GLPGLI family protein PF09697|TIGR01200 CUB95_RS11310 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000531|IPR008969 Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF13715|SSF49464|SSF56935 CUB95_RS11320 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|TIGR00494 CUB95_RS11325 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000432|IPR002625|IPR005747|IPR007696|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, core|Endonuclease MutS2|P-loop containing nucleoside triphosphate hydrolase|Smr domain GO:0004519|GO:0005524|GO:0006298|GO:0016887|GO:0030983|GO:0045910 G3DSA:1.10.1420.10|G3DSA:3.40.50.300|MF_00092|PF00488|PF01713|PIRSF005814|SM00463|SM00533|SM00534|SSF160443|SSF48334|SSF52540 CUB95_RS11335 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011063|IPR012094|IPR012795|IPR012796|IPR014729|IPR020825 Lysidine-tRNA(Ile) synthetase, C-terminal|Phenylalanyl-tRNA synthetase, B3/B4|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:3.40.50.620|G3DSA:3.50.40.10|MF_01161|PF01171|SM00977|SSF52402|SSF56037|TIGR02432 CUB95_RS11340 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002478|IPR015947|IPR019614|IPR029063 PUA domain|PUA-like domain|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosylmethionine-dependent methyltransferase GO:0003723|GO:0008168 G3DSA:2.30.130.10|G3DSA:3.30.750.80|G3DSA:3.40.50.150|PF10672|SM00359|SSF53335|SSF88697 CUB95_RS11345 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002562|IPR012337 3'-5' exonuclease domain|Ribonuclease H-like domain GO:0003676|GO:0006139|GO:0008408 G3DSA:3.30.420.10|PF01612|SM00474|SSF53098 CUB95_RS11350 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002543|IPR011991|IPR018541|IPR025199|IPR027417 DNA translocase FtsK, 4TM region|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003677|GO:0005524 G3DSA:1.10.10.10|G3DSA:3.40.50.300|PF01580|PF09397|PF13491|SM00843|SSF46785|SSF52540 CUB95_RS11355 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004564|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein carrier protein LolA-like G3DSA:2.50.20.10|PF16584|SSF89392 CUB95_RS11365 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR017039 Virulence factor BrkB PF03631|TIGR00765 CUB95_RS11370 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001404|IPR003594|IPR019805|IPR020568|IPR020575 Heat shock protein Hsp90 family|Heat shock protein Hsp90, N-terminal|Heat shock protein Hsp90, conserved site|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold GO:0005524|GO:0006457|GO:0006950|GO:0051082 G3DSA:3.30.565.10|G3DSA:3.40.50.300|PF00183|PF13589|PIRSF002583|PR00775|PS00298|SSF54211|SSF55874 CUB95_RS11375 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003724|IPR027417 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0008817|GO:0009236 G3DSA:3.40.50.300|PF02572|PIRSF015617|SSF52540 CUB95_RS11385 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003593|IPR007692|IPR007693|IPR007694|IPR016136|IPR027417 AAA+ ATPase domain|DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|SM00382|SSF48024|SSF52540|TIGR00665 CUB95_RS11390 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004424|IPR006204|IPR013750|IPR014721|IPR020568 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PF08544|PIRSF010376|SSF54211|SSF55060|TIGR00154 CUB95_RS11395 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001383|IPR026569|IPR034704 L28p-like|Ribosomal protein L28|Ribosomal protein L28/L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00830|SSF143800|TIGR00009 CUB95_RS11400 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001705|IPR011332 Ribosomal protein L33|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00294|PF00471|SSF57829|TIGR01023 CUB95_RS11405 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025379 Protein of unknown function DUF4295 PF14128 CUB95_RS11410 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007452 Translocation and assembly module TamB PF04357 CUB95_RS11415 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000184 Bacterial surface antigen (D15) GO:0019867 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF01103 CUB95_RS11440 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009589 Sublancin immunity protein SunI GO:0030153 PF06713 CUB95_RS11445 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR020937|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.10.450.50|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|SM00957|SM00958|SSF52540|SSF81767|SSF81886 CUB95_RS11455 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025178 Domain of unknown function DUF4105 G3DSA:1.20.1250.20|PF13387 CUB95_RS11460 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.40.160.60|SSF56935 CUB95_RS11465 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010664|IPR026265 Lipopolysaccharide assembly, LptC-related|Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 G3DSA:2.60.450.10|PF06835|TIGR04409 CUB95_RS11470 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000644|IPR002550|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Domain of unknown function DUF21|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|SM01091|SSF54631|SSF56176 CUB95_RS11475 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027304 Trigger factor/SurA domain G3DSA:1.10.4030.10|G3DSA:3.10.50.40|PF13616|PF13623|SSF109998|SSF54534 CUB95_RS11500 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003136|IPR011994|IPR027417 Cytidylate kinase|Cytidylate kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0004127|GO:0005524|GO:0006139 G3DSA:3.40.50.300|MF_00238|PF02224|SSF52540|TIGR00017 CUB95_RS11505 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR019861 Type IX secretion system membrane protein, PorP/SprF family G3DSA:2.40.160.60|PF11751|SSF56935 CUB95_RS11510 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|SSF74653|TIGR01352 CUB95_RS11515 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000092|IPR008949|IPR033749 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase, conserved site GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|SSF48576 CUB95_RS11525 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001130|IPR015991|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family|Uncharacterised hydrolase TatD-type GO:0004536|GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01091|PS01137|SSF51556|TIGR00010 CUB95_RS11530 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011250|IPR018550 Lipid A 3-O-deacylase-related|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF09411 CUB95_RS11535 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825 B3/B4 tRNA-binding domain|Ferrodoxin-fold anticodon-binding domain|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, class IIc, beta subunit|Phenylalanyl-tRNA synthetase, B3/B4|Putative DNA-binding domain|tRNA synthetase, B5-domain|tRNA-binding domain GO:0000049|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432 G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472 CUB95_RS11540 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002876|IPR017856|IPR026564|IPR029072 Integrase, N-terminal zinc-binding domain-like|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.70.980|MF_00693|PF01709|SSF75625|TIGR01033 CUB95_RS11545 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007351 Uncharacterised protein YjbR PF04237|SSF142906 CUB95_RS11555 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007351 Uncharacterised protein YjbR PF04237|SSF142906 CUB95_RS11560 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|SSF51735 CUB95_RS11565 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021474 Protein of unknown function DUF3127 PF11325 CUB95_RS11570 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001001|IPR022634|IPR022635|IPR022637 DNA polymerase III, beta chain|DNA polymerase III, beta chain, C-terminal|DNA polymerase III, beta chain, N-terminal|DNA polymerase III, beta chain, central GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|PF00712|PF02767|PF02768|PIRSF000804|SM00480|SSF55979|TIGR00663 CUB95_RS11575 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012337|IPR013520 Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF00929|SM00479|SSF53098 CUB95_RS11580 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003382|IPR005252|IPR007085 Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavoprotein GO:0003824|GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|SSF102645|SSF52507|TIGR00521 CUB95_RS11585 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032274 Protein of unknown function DUF4835 PF16119 CUB95_RS11590 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003395|IPR004604|IPR027417 DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0005524|GO:0006281|GO:0006310 G3DSA:3.40.50.300|PF02463|PIRSF003128|SSF52540|TIGR00634 CUB95_RS11595 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009003|IPR011990|IPR019734 Peptidase S1, PA clan|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.10.287.1110|G3DSA:1.20.58.280|G3DSA:1.25.40.10|G3DSA:2.40.10.10|PF13432|SM00028|SSF48452|SSF50494 CUB95_RS11605 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PF08843 CUB95_RS11620 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001604|IPR020821 DNA/RNA non-specific endonuclease|Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 G3DSA:3.40.570.10|PF01223|SM00477|SM00892|SSF54060 CUB95_RS11640 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 CUB95_RS11655 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025665 Outer membrane protein beta-barrel domain PF13568 CUB95_RS11665 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003812|IPR011991|IPR025230 Domain of unknown function DUF4172|Fido domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:1.10.3290.10|PF02661|PF13776|SSF140931 CUB95_RS11670 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000440|IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid|NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0016651|GO:0055114 MF_01394|PF00507 CUB95_RS11675 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006137|IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit|NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0008137|GO:0048038|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.40.50.700|MF_01356|PF01058|SSF56770|TIGR01957 CUB95_RS11680 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001135|IPR001268|IPR029014 NADH-quinone oxidoreductase, subunit D|NADH:ubiquinone oxidoreductase, 30kDa subunit|NiFe hydrogenase-like GO:0008137|GO:0016651|GO:0048038|GO:0051287|GO:0055114 G3DSA:1.10.645.10|PD001581|PF00329|PF00346|SSF143243|SSF56762 CUB95_RS11685 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001694|IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site|NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 MF_01350|PF00146|PS00668 CUB95_RS11690 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12838|PS00198|SSF54862 CUB95_RS11695 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 G3DSA:1.20.1250.20|PF00499 CUB95_RS11700 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 MF_01456|PF00420 CUB95_RS11705 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001516|IPR001750|IPR003945|IPR018393 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH-plastoquinone oxidoreductase, chain 5|NADH-plastoquinone oxidoreductase, chain 5 subgroup|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 PF00361|PF00662|PR01434|PR01435|TIGR01974 CUB95_RS11710 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001750|IPR003918|IPR010227 NADH-quinone oxidoreductase, chain M/4|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PF00361|PR01437|TIGR01972 CUB95_RS11715 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001750|IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 MF_00445|PF00361|TIGR01770 CUB95_RS11730 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.40.50.260|G3DSA:3.55.50.10|PF05954|SSF69255|SSF69279|SSF69349 CUB95_RS11740 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003587|IPR006141|IPR025460|IPR028992|IPR030934|IPR032869 Hedgehog/Intein (Hint) domain|Hint domain N-terminal|Intein C-terminal splicing region|Intein N-terminal splicing region|Protein of unknown function DUF4280|WHH domain-containing protein GO:0016539 G3DSA:2.170.16.10|PF07591|PF14107|PF14414|SM00306|SSF51294|TIGR01443|TIGR01445 CUB95_RS11745 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018958 Knr4/Smi1-like domain G3DSA:3.40.1580.10|PF14568|SM00860|SSF160631 CUB95_RS11760 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR028992|IPR030934 Hedgehog/Intein (Hint) domain|Intein C-terminal splicing region G3DSA:2.170.16.10|PF07591|SSF51294|TIGR01443 CUB95_RS11770 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR028992|IPR030934 Hedgehog/Intein (Hint) domain|Intein C-terminal splicing region G3DSA:2.170.16.10|PF07591|SSF51294|TIGR01443 CUB95_RS11795 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016024 Armadillo-type fold GO:0005488 G3DSA:1.25.40.70|PF13646|SSF48371 CUB95_RS11815 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR026834|IPR028992|IPR030934 Hedgehog/Intein (Hint) domain|Intein C-terminal splicing region|LHH G3DSA:2.170.16.10|PF07591|PF14411|SSF51294|TIGR01443 CUB95_RS11820 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018958 Knr4/Smi1-like domain G3DSA:3.40.1580.10|PF14567|SM00860|SSF160631 CUB95_RS11825 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018958 Knr4/Smi1-like domain G3DSA:3.40.1580.10|PF14568|SM00860|SSF160631 CUB95_RS11840 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR028992|IPR030934|IPR032869 Hedgehog/Intein (Hint) domain|Intein C-terminal splicing region|WHH domain-containing protein G3DSA:2.170.16.10|PF07591|PF14414|SSF51294|TIGR01443 CUB95_RS11845 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018958 Knr4/Smi1-like domain G3DSA:3.40.1580.10|PF09346|SM00860|SSF160631 CUB95_RS11850 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003587|IPR006141|IPR028992|IPR030934 Hedgehog/Intein (Hint) domain|Hint domain N-terminal|Intein C-terminal splicing region|Intein N-terminal splicing region GO:0016539 G3DSA:2.170.16.10|PF07591|SM00306|SSF51294|TIGR01443|TIGR01445 CUB95_RS11855 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032869 WHH domain-containing protein PF14414 CUB95_RS11860 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.40.1580.10|PF14568|SSF160631 CUB95_RS11880 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002560|IPR029261|IPR032877 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain|Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PF01610|PF13542|PF14690 CUB95_RS11885 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000209|IPR015500|IPR022398|IPR023827|IPR023828 Peptidase S8, subtilisin, Asp-active site|Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|PR00723|PS00136|PS00137|PS00138|SSF52743 CUB95_RS11890 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 G3DSA:3.30.70.80|PF05922 CUB95_RS11895 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000209|IPR015500|IPR022398|IPR023827|IPR023828 Peptidase S8, subtilisin, Asp-active site|Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|PR00723|PS00136|PS00137|PS00138|SSF52743 CUB95_RS11900 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 CUB95_RS11905 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|SSF51735 CUB95_RS11910 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011576|IPR012349 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase, putative GO:0048037 G3DSA:2.30.110.10|PF01243|SSF50475 CUB95_RS11925 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS11930 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021561|IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain|Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system PF11459|PF17194 CUB95_RS11940 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001650|IPR027417 Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF00271|SM00490|SSF52540 CUB95_RS11945 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|SSF56349 CUB95_RS11950 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS11955 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015082 Protein of unknown function DUF1896 G3DSA:1.10.8.330|G3DSA:1.10.8.340|PF08989|SSF140753 CUB95_RS11965 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS11970 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR010093|IPR011991 Putative DNA-binding domain|SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|SSF46955|TIGR01764 CUB95_RS11975 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS11990 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF14659|SSF56349 CUB95_RS11995 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 G3DSA:3.90.220.20|PF01420|SSF116734 CUB95_RS12000 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 G3DSA:3.90.220.20|PF01420|SSF116734 CUB95_RS12005 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.90.220.20|SSF116734 CUB95_RS12010 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 G3DSA:1.10.287.1120|G3DSA:3.90.220.20|PF01420|SSF116734 CUB95_RS12015 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007421|IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain|Schlafen, AAA domain GO:0005524 PF04326|PF13749 CUB95_RS12020 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004919|IPR011089 Domain of unknown function DUF1524|Domain of unknown function DUF262 PF03235|PF07510 CUB95_RS12025 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002052|IPR003356|IPR004546|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|Restriction endonuclease, type I, HsdM|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0009007|GO:0009307|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|SSF53335|TIGR00497 CUB95_RS12030 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.90.70.10 CUB95_RS12035 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004473|IPR006935|IPR007409|IPR014001|IPR022625|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, type I, HsdR|Restriction endonuclease, type I, HsdR, N-terminal|Type-1 restriction enzyme R protein, C-terminal GO:0003677|GO:0004519|GO:0005524|GO:0006304|GO:0009035|GO:0009307|GO:0016787 G3DSA:3.40.50.300|PF04313|PF04851|PF12008|SM00487|SSF52540|TIGR00348 CUB95_RS12040 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13443|SM00530|SSF47413 CUB95_RS12045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003356|IPR021341|IPR027417|IPR029063 DNA methylase, adenine-specific|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF2958|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0006306|GO:0008170 G3DSA:3.40.50.150|G3DSA:3.40.50.300|PF02384|PF11171|SSF52540|SSF53335 CUB95_RS12050 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003601|IPR003602|IPR005738|IPR006171|IPR013497|IPR023405|IPR025589 DNA topoisomerase III|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|TOPRIM domain|Topoisomerase C-terminal repeat GO:0003677|GO:0003916|GO:0006265 G3DSA:1.10.460.10|G3DSA:3.40.50.140|PF01131|PF01751|PF13342|PR00417|SM00436|SM00437|SM00493|SSF56712|TIGR01056 CUB95_RS12055 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025222|IPR025343 Protein of unknown function DUF3945|Protein of unknown function DUF4099 PF13101|PF13351 CUB95_RS12060 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002937|IPR014105|IPR023753 Amine oxidase|Carotenoid/retinoid oxidoreductase|FAD/NAD(P)-binding domain GO:0016117|GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|SSF51905|TIGR02734 CUB95_RS12065 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|SM00028|SSF48452 CUB95_RS12070 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 CUB95_RS12075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|SM00563|SSF69593 CUB95_RS12080 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007354 Carotene biosynthesis associated membrane protein PF04240 CUB95_RS12085 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000086|IPR011876|IPR015797 Isopentenyl-diphosphate delta-isomerase, type 1|NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0004452|GO:0008299|GO:0016787 G3DSA:3.90.79.10|MF_00202|PF00293|PIRSF018427|SSF55811|TIGR02150 CUB95_RS12090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002060|IPR008949|IPR019845 Isoprenoid synthase domain|Squalene/phytoene synthase|Squalene/phytoene synthase, conserved site GO:0009058|GO:0016740|GO:0016765 G3DSA:1.10.600.10|PF00494|PS01045|SSF48576 CUB95_RS12095 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609 CUB95_RS12100 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001789|IPR007492|IPR011006 CheY-like superfamily|LytTR DNA-binding domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677 G3DSA:2.40.50.40|G3DSA:3.40.50.2300|PF00072|PF04397|SM00448|SM00850|SSF52172 CUB95_RS12105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003594|IPR010559 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 G3DSA:3.30.565.10|PF06580 CUB95_RS12110 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.40.160.60 CUB95_RS12115 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 CUB95_RS12135 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10 CUB95_RS12150 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009057 Homeobox domain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 CUB95_RS12155 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001917|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0008152|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00599|SSF53383 CUB95_RS12160 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:2.170.15.10 CUB95_RS12165 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR020864 Membrane attack complex component/perforin (MACPF) domain PF01823 CUB95_RS12170 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013783|IPR026906|IPR032675 Immunoglobulin-like fold|Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:2.60.40.10|G3DSA:3.80.10.10|PF13306|SSF52058 CUB95_RS12180 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002559|IPR014736 Transposase, IS4-like|Transposase, Tn5-like, core GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609 CUB95_RS12185 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025988|IPR027417|IPR032689 P-loop containing nucleoside triphosphate hydrolase|TraD/TraG, TraM recognition site|YWFCY domain G3DSA:3.40.50.300|PF12696|PF14293|SSF52540 CUB95_RS12190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 CUB95_RS12200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|SSF52540 CUB95_RS12205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS12210 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS12220 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025408 Protein of unknown function DUF4134 PF13572 CUB95_RS12225 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025407 Protein of unknown function DUF4133 PF13571 CUB95_RS12230 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022509|IPR024451|IPR027417 Conjugation system ATPase, TraG|Domain of unknown function DUF3875|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF12991|SSF52540|TIGR03783 CUB95_RS12235 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025415 Protein of unknown function DUF4141 PF13605 CUB95_RS12240 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012424|IPR022393 Conjugative transposon, TraJ|Conjugative transposon, TraJ, C-terminal PF07863|TIGR03782 CUB95_RS12245 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007430|IPR022276 Bacterial virulence protein VirB8|Conjugative transposon, TraK GO:0016020 PF04335|TIGR03781 CUB95_RS12255 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022187 Conjugative transposon, TraM PF12508|TIGR03779 CUB95_RS12260 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022298 Conjugative transposon, TraN PF13595|TIGR03780 CUB95_RS12265 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018899 Conjugative transposon, TraO PF10626 CUB95_RS12270 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024355 Protein of unknown function DUF3872 PF12988 CUB95_RS12275 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023346|IPR023347 Lysozyme domain|Lysozyme-like domain GO:0003796 G3DSA:1.10.530.40|SSF53955 CUB95_RS12285 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|SSF47729 CUB95_RS12315 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015082 Protein of unknown function DUF1896 G3DSA:1.10.8.330|G3DSA:1.10.8.340|PF08989|SSF140753 CUB95_RS12320 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS12330 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|SSF56349 CUB95_RS12335 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024363 Protein of unknown function DUF3853 G3DSA:1.10.1660.20|PF12964 CUB95_RS12355 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003615 HNH nuclease G3DSA:3.40.1800.10|SM00507 CUB95_RS12395 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|SSF52540 CUB95_RS12410 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.10.10.60 CUB95_RS12415 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021474 Protein of unknown function DUF3127 PF11325 CUB95_RS12425 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025408 Protein of unknown function DUF4134 PF13572 CUB95_RS12435 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022509|IPR027417 Conjugation system ATPase, TraG|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540|TIGR03783 CUB95_RS12450 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR032492 Domain of unknown function DUF5045 PF16464 CUB95_RS12455 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.20.5.1230 CUB95_RS12460 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022276 Conjugative transposon, TraK TIGR03781 CUB95_RS12470 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022187 Conjugative transposon, TraM PF12508|TIGR03779 CUB95_RS12475 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022298 Conjugative transposon, TraN PF13595|TIGR03780 CUB95_RS12490 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027417|IPR032689 P-loop containing nucleoside triphosphate hydrolase|TraD/TraG, TraM recognition site G3DSA:3.40.50.300|PF12696|SSF52540 CUB95_RS12495 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010982|IPR011991 Lambda repressor-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|G3DSA:3.30.1190.10|SSF47413 CUB95_RS12505 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS12515 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR010093|IPR011991 Putative DNA-binding domain|SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|SSF46955|TIGR01764 CUB95_RS12520 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS12530 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR010093|IPR011991 Putative DNA-binding domain|SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|SSF46955|TIGR01764 CUB95_RS12535 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 CUB95_RS12540 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025222|IPR025343 Protein of unknown function DUF3945|Protein of unknown function DUF4099 PF13101|PF13351 CUB95_RS12545 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003601|IPR003602|IPR006171|IPR013497|IPR013825|IPR023405|IPR025589 DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|TOPRIM domain|Topoisomerase C-terminal repeat GO:0003677|GO:0003916|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.40.50.140|PF01131|PF01751|PF13342|PR00417|SM00436|SM00437|SM00493|SSF56712 CUB95_RS12550 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR015082 Protein of unknown function DUF1896 G3DSA:1.10.8.330|G3DSA:1.10.8.340|PF08989|SSF140753 CUB95_RS12555 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000330|IPR001650|IPR003356|IPR014001|IPR027417|IPR029063 DNA methylase, adenine-specific|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|S-adenosyl-L-methionine-dependent methyltransferase|SNF2-related, N-terminal domain GO:0003677|GO:0005524|GO:0006306|GO:0008170 G3DSA:1.10.287.510|G3DSA:3.40.50.150|G3DSA:3.40.50.300|PF00176|PF00271|PF02384|PR00507|SM00487|SM00490|SSF52540|SSF53335 CUB95_RS12560 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007349 Domain of unknown function DUF418 PF04235 CUB95_RS12565 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 CUB95_RS12570 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PF13673|SSF55729 CUB95_RS12575 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000640|IPR000795|IPR005225|IPR005517|IPR009000|IPR014721|IPR020568|IPR027417|IPR031157|IPR035647 EF-G domain III/V-like|Elongation factor EFG, domain V-like|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG/EF2, domain IV|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03764|PF14492|PR00315|PR01037|PS00301|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231 CUB95_RS12580 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55874 CUB95_RS12585 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025943|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeobox domain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 2|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00676|SM00382|SM00448|SSF46689|SSF52172|SSF52540 CUB95_RS12590 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002734|IPR024072 Bacterial bifunctional deaminase-reductase, C-terminal|Dihydrofolate reductase-like domain GO:0008703|GO:0009231|GO:0055114 G3DSA:3.40.430.10|PF01872|SSF53597 CUB95_RS12595 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018534 Tetracycline regulation of excision, RteC PF09357 CUB95_RS12600 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007421|IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain|Schlafen, AAA domain GO:0005524 PF04326|PF13749 CUB95_RS12610 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025988|IPR027417|IPR032689 P-loop containing nucleoside triphosphate hydrolase|TraD/TraG, TraM recognition site|YWFCY domain G3DSA:3.40.50.300|PF12696|PF14293|SSF52540 CUB95_RS12615 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 CUB95_RS12630 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|SSF52540 CUB95_RS12635 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS12640 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021823 Protein of unknown function DUF3408 PF11888 CUB95_RS12650 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025408 Protein of unknown function DUF4134 PF13572 CUB95_RS12655 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025407 Protein of unknown function DUF4133 PF13571 CUB95_RS12660 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022509|IPR024451|IPR027417 Conjugation system ATPase, TraG|Domain of unknown function DUF3875|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF12991|SSF52540|TIGR03783 CUB95_RS12665 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024452 Protein of unknown function DUF3876 PF12992 CUB95_RS12670 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025415 Protein of unknown function DUF4141 PF13605 CUB95_RS12675 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012424|IPR022393 Conjugative transposon, TraJ|Conjugative transposon, TraJ, C-terminal PF07863|TIGR03782 CUB95_RS12680 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022276 Conjugative transposon, TraK TIGR03781 CUB95_RS12685 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025050 Protein of unknown function DUF3989 PF13150 CUB95_RS12690 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022187 Conjugative transposon, TraM PF12508|TIGR03779 CUB95_RS12695 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR022298 Conjugative transposon, TraN PF13595|TIGR03780 CUB95_RS12700 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018899 Conjugative transposon, TraO PF10626 CUB95_RS12705 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|PF01807|PF13155|SSF57783 CUB95_RS12710 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024355 Protein of unknown function DUF3872 PF12988 CUB95_RS12715 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR023346|IPR023347 Lysozyme domain|Lysozyme-like domain GO:0003796 G3DSA:1.10.530.40|SSF53955 CUB95_RS12735 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024356 Protein of unknown function DUF3873 PF12989 CUB95_RS12740 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.30.450.80 CUB95_RS12745 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025586 PcfJ-like protein PF14284 CUB95_RS12750 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025624 PcfK-like protein PF14058 CUB95_RS12780 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002901|IPR011055|IPR016047 Duplicated hybrid motif|Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain|Peptidase M23 GO:0004040 G3DSA:1.10.530.10|G3DSA:2.70.70.10|PF01551|PF01832|SM00047|SSF51261 CUB95_RS12785 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025222|IPR025343 Protein of unknown function DUF3945|Protein of unknown function DUF4099 PF13101|PF13351 CUB95_RS12795 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR007695|IPR016151 DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 G3DSA:3.40.1170.10|PF01624|SSF55271 CUB95_RS12805 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR013610 Domain of unknown function DUF1738 PF08401 CUB95_RS12810 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025054 Domain of unknown function DUF3991 G3DSA:3.40.1360.10|PF13154|PF13155 CUB95_RS12815 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005182 Domain of unknown function DUF304 PF03703 CUB95_RS12825 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:3.30.65.10 CUB95_RS12830 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|SSF47729 CUB95_RS12850 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 CUB95_RS12855 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR008687 Bacterial mobilisation PF05713 CUB95_RS12865 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000525|IPR011991 Initiator Rep protein|Winged helix-turn-helix DNA-binding domain GO:0003887|GO:0005727|GO:0006270 G3DSA:1.10.10.10|PF01051|SSF46785 CUB95_RS12890 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR014736|IPR025668 Transposase DDE domain|Transposase, Tn5-like, core G3DSA:3.90.350.10|PF13701 CUB95_RS12900 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012338|IPR023650 Beta-lactamase, class-A active site|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF13354|PS00146|SSF56601 CUB95_RS12905 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic G3DSA:1.20.1170.10 CUB95_RS12915 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:1.10.10.60|G3DSA:3.40.50.300|PF13384|PF13481|SSF52540 CUB95_RS12920 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR010093|IPR011991 SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|TIGR01764 CUB95_RS12930 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025269|IPR035386 Arm, DNA-binding domain|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Phage integrase SAM-like domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13102|PF17293|SSF56349 CUB95_RS12935 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000551|IPR011991|IPR013088 MerR-type HTH domain|Winged helix-turn-helix DNA-binding domain|Zinc finger, NHR/GATA-type GO:0003677|GO:0006355|GO:0008270 G3DSA:1.10.10.10|G3DSA:1.10.1660.10|G3DSA:3.30.50.10|PF12728|PF13411 CUB95_RS12980 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR024401 WYL domain containing protein PF10902 CUB95_RS13010 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003358|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 G3DSA:3.40.50.150|MF_01057|PF02390|SSF53335 CUB95_RS13020 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000209|IPR015500|IPR022398|IPR023827 Peptidase S8, subtilisin, Asp-active site|Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|PR00723|PS00136|PS00137|SSF52743 CUB95_RS13040 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.300|SSF48452 CUB95_RS13045 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 CUB95_RS13065 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011050|IPR012332 P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor G3DSA:2.160.20.20|SSF51126 CUB95_RS13070 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PR00421|PS00194|SSF52833|TIGR01068 CUB95_RS13075 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 CUB95_RS13080 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|SSF46785 CUB95_RS13085 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000119|IPR005902|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Putative DNA-binding protein, HU-related GO:0003677 G3DSA:4.10.520.10|PF00216|SSF47729|TIGR01201 CUB95_RS13090 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009045|IPR013230 Hedgehog signalling/DD-peptidase zinc-binding domain|Peptidase M15A, C-terminal G3DSA:3.30.1380.10|PF08291|SSF55166 CUB95_RS13100 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 CUB95_RS13105 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003356|IPR022749|IPR029063 DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0006306|GO:0008170 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|SSF53335 CUB95_RS13115 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR004473|IPR006935|IPR007409|IPR014001|IPR021810|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF3387|Restriction endonuclease, type I, HsdR|Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0005524|GO:0006304|GO:0009035|GO:0009307|GO:0016787 G3DSA:3.40.50.300|PF04313|PF04851|PF11867|SM00487|SSF52540|TIGR00348 CUB95_RS13120 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR009057|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeobox domain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PS00041|SM00342|SSF46689 CUB95_RS13125 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012893 HipA-like, C-terminal PF07804 CUB95_RS13130 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR017508 HipA, N-terminal subdomain 1 PF13657|TIGR03071 CUB95_RS13135 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001387|IPR010982|IPR017507 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Transcription regulator, HipB-like GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413|TIGR03070 CUB95_RS13150 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR006056|IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|RidA family|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298|TIGR00004 CUB95_RS13190 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|SSF52540 CUB95_RS13200 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012332 P22 tailspike C-terminal domain-like G3DSA:2.160.20.20 CUB95_RS13205 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011991|IPR025420|IPR027417 Domain of unknown function DUF4143|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.40.50.300|PF13173|PF13635|SSF52540 CUB95_RS13210 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR018841 Protein of unknown function DUF2442 PF10387 CUB95_RS13215 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR025427 Protein of unknown function DUF4160 PF13711 CUB95_RS13220 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011050|IPR012332 P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor G3DSA:2.160.20.20|SSF51126 CUB95_RS13225 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011050|IPR012332 P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor G3DSA:2.160.20.20|SSF51126 CUB95_RS13235 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012332 P22 tailspike C-terminal domain-like G3DSA:2.160.20.20 CUB95_RS13240 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR011050|IPR012334 Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|SSF51126 CUB95_RS13250 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR012332|IPR012334|IPR018832 P22 tailspike C-terminal domain-like|Pectin lyase fold|Peptidase C25, gingipain, C-terminal G3DSA:2.160.20.10|G3DSA:2.160.20.20|PF10365 CUB95_RS13255 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:3.30.300.20|PF02566|SSF82784 CUB95_RS13260 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR021354 Protein of unknown function DUF2975 PF11188 CUB95_RS13265 /data/g2d_mirror/Prevotella_intermedia_KCOM_1741/ASM276395v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13443|SM00530|SSF47413