locus-tag class description CTM46_RS00020 PF03051 Peptidase C1-like family CTM46_RS00030 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CTM46_RS00030 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CTM46_RS00035 PF06508 Queuosine biosynthesis protein QueC CTM46_RS00040 PF00162 Phosphoglycerate kinase CTM46_RS00060 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CTM46_RS00060 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CTM46_RS00090 PF16653 Saccharopine dehydrogenase C-terminal domain CTM46_RS00090 PF03435 Saccharopine dehydrogenase NADP binding domain CTM46_RS00100 PF00154 recA bacterial DNA recombination protein CTM46_RS00115 PF00756 Putative esterase CTM46_RS00115 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase CTM46_RS00120 PF01116 Fructose-bisphosphate aldolase class-II CTM46_RS00125 PF03853 YjeF-related protein N-terminus CTM46_RS00125 PF01256 Carbohydrate kinase CTM46_RS00130 PF00156 Phosphoribosyl transferase domain CTM46_RS00140 PF01926 50S ribosome-binding GTPase CTM46_RS00140 PF01018 GTP1/OBG CTM46_RS00145 PF02578 Multi-copper polyphenol oxidoreductase laccase CTM46_RS00155 PF02272 DHHA1 domain CTM46_RS00155 PF01411 tRNA synthetases class II (A) CTM46_RS00155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CTM46_RS00170 PF00005 ABC transporter CTM46_RS00185 PF12833 Helix-turn-helix domain CTM46_RS00185 PF12852 Cupin CTM46_RS00190 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain CTM46_RS00190 PF01118 Semialdehyde dehydrogenase, NAD binding domain CTM46_RS00200 PF01245 Ribosomal protein L19 CTM46_RS00210 PF00149 Calcineurin-like phosphoesterase CTM46_RS00210 PF02872 5'-nucleotidase, C-terminal domain CTM46_RS00220 PF00037 4Fe-4S binding domain CTM46_RS00225 PF04607 Region found in RelA / SpoT proteins CTM46_RS00235 PF00027 Cyclic nucleotide-binding domain CTM46_RS00235 PF00520 Ion transport protein CTM46_RS00250 PF00012 Hsp70 protein CTM46_RS00270 PF01807 CHC2 zinc finger CTM46_RS00270 PF10410 DnaB-helicase binding domain of primase CTM46_RS00270 PF08275 DNA primase catalytic core, N-terminal domain CTM46_RS00275 PF13091 PLD-like domain CTM46_RS00275 PF13396 Phospholipase_D-nuclease N-terminal CTM46_RS00285 PF01196 Ribosomal protein L17 CTM46_RS00290 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CTM46_RS00290 PF01000 RNA polymerase Rpb3/RpoA insert domain CTM46_RS00290 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CTM46_RS00295 PF01479 S4 domain CTM46_RS00295 PF00163 Ribosomal protein S4/S9 N-terminal domain CTM46_RS00300 PF00411 Ribosomal protein S11 CTM46_RS00305 PF00416 Ribosomal protein S13/S18 CTM46_RS00310 PF00444 Ribosomal protein L36 CTM46_RS00315 PF01176 Translation initiation factor 1A / IF-1 CTM46_RS00320 PF00344 SecY translocase CTM46_RS00325 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CTM46_RS00330 PF00327 Ribosomal protein L30p/L7e CTM46_RS00335 PF03719 Ribosomal protein S5, C-terminal domain CTM46_RS00335 PF00333 Ribosomal protein S5, N-terminal domain CTM46_RS00340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CTM46_RS00345 PF00347 Ribosomal protein L6 CTM46_RS00350 PF00410 Ribosomal protein S8 CTM46_RS00355 PF00253 Ribosomal protein S14p/S29e CTM46_RS00360 PF00281 Ribosomal protein L5 CTM46_RS00360 PF00673 ribosomal L5P family C-terminus CTM46_RS00365 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CTM46_RS00365 PF00467 KOW motif CTM46_RS00370 PF00238 Ribosomal protein L14p/L23e CTM46_RS00375 PF00366 Ribosomal protein S17 CTM46_RS00380 PF00831 Ribosomal L29 protein CTM46_RS00385 PF00252 Ribosomal protein L16p/L10e CTM46_RS00390 PF00189 Ribosomal protein S3, C-terminal domain CTM46_RS00390 PF07650 KH domain CTM46_RS00395 PF00237 Ribosomal protein L22p/L17e CTM46_RS00400 PF00203 Ribosomal protein S19 CTM46_RS00405 PF03947 Ribosomal Proteins L2, C-terminal domain CTM46_RS00405 PF00181 Ribosomal Proteins L2, RNA binding domain CTM46_RS00410 PF00276 Ribosomal protein L23 CTM46_RS00415 PF00573 Ribosomal protein L4/L1 family CTM46_RS00420 PF00297 Ribosomal protein L3 CTM46_RS00425 PF00338 Ribosomal protein S10p/S20e CTM46_RS00430 PF03144 Elongation factor Tu domain 2 CTM46_RS00430 PF00009 Elongation factor Tu GTP binding domain CTM46_RS00430 PF03764 Elongation factor G, domain IV CTM46_RS00430 PF14492 Elongation Factor G, domain II CTM46_RS00430 PF00679 Elongation factor G C-terminus CTM46_RS00435 PF00177 Ribosomal protein S7p/S5e CTM46_RS00440 PF00164 Ribosomal protein S12/S23 CTM46_RS00465 PF03575 Peptidase family S51 CTM46_RS00490 PF04997 RNA polymerase Rpb1, domain 1 CTM46_RS00490 PF05000 RNA polymerase Rpb1, domain 4 CTM46_RS00490 PF04983 RNA polymerase Rpb1, domain 3 CTM46_RS00490 PF00623 RNA polymerase Rpb1, domain 2 CTM46_RS00490 PF04998 RNA polymerase Rpb1, domain 5 CTM46_RS00495 PF04563 RNA polymerase beta subunit CTM46_RS00495 PF04560 RNA polymerase Rpb2, domain 7 CTM46_RS00495 PF04561 RNA polymerase Rpb2, domain 2 CTM46_RS00495 PF04565 RNA polymerase Rpb2, domain 3 CTM46_RS00495 PF10385 RNA polymerase beta subunit external 1 domain CTM46_RS00495 PF00562 RNA polymerase Rpb2, domain 6 CTM46_RS00500 PF16320 Ribosomal protein L7/L12 dimerisation domain CTM46_RS00500 PF00542 Ribosomal protein L7/L12 C-terminal domain CTM46_RS00505 PF00466 Ribosomal protein L10 CTM46_RS00510 PF00687 Ribosomal protein L1p/L10e family CTM46_RS00515 PF03946 Ribosomal protein L11, N-terminal domain CTM46_RS00515 PF00298 Ribosomal protein L11, RNA binding domain CTM46_RS00520 PF00467 KOW motif CTM46_RS00520 PF02357 Transcription termination factor nusG CTM46_RS00535 PF03144 Elongation factor Tu domain 2 CTM46_RS00535 PF00009 Elongation factor Tu GTP binding domain CTM46_RS00535 PF03143 Elongation factor Tu C-terminal domain CTM46_RS00565 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS00565 PF00589 Phage integrase family CTM46_RS00570 PF01165 Ribosomal protein S21 CTM46_RS00575 PF00144 Beta-lactamase CTM46_RS00585 PF00557 Metallopeptidase family M24 CTM46_RS00585 PF01321 Creatinase/Prolidase N-terminal domain CTM46_RS00615 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CTM46_RS00615 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CTM46_RS00635 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CTM46_RS00635 PF00056 lactate/malate dehydrogenase, NAD binding domain CTM46_RS00665 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CTM46_RS00665 PF04851 Type III restriction enzyme, res subunit CTM46_RS00665 PF18074 Primosomal protein N C-terminal domain CTM46_RS00665 PF17764 3′ DNA-binding domain (3′BD) CTM46_RS00665 PF00271 Helicase conserved C-terminal domain CTM46_RS00670 PF07698 7TM receptor with intracellular HD hydrolase CTM46_RS00670 PF07697 7TM-HD extracellular CTM46_RS00670 PF01966 HD domain CTM46_RS00680 PF00749 tRNA synthetases class I (E and Q), catalytic domain CTM46_RS00695 PF00579 tRNA synthetases class I (W and Y) CTM46_RS00705 PF00155 Aminotransferase class I and II CTM46_RS00750 PF03781 Sulfatase-modifying factor enzyme 1 CTM46_RS00765 PF01923 Cobalamin adenosyltransferase CTM46_RS00805 PF03641 Possible lysine decarboxylase CTM46_RS00815 PF01757 Acyltransferase family CTM46_RS00820 PF00753 Metallo-beta-lactamase superfamily CTM46_RS00820 PF00258 Flavodoxin CTM46_RS00825 PF00675 Insulinase (Peptidase family M16) CTM46_RS00825 PF05193 Peptidase M16 inactive domain CTM46_RS00865 PF00692 dUTPase CTM46_RS00870 PF01966 HD domain CTM46_RS00890 PF01515 Phosphate acetyl/butaryl transferase CTM46_RS00895 PF00871 Acetokinase family CTM46_RS00905 PF01370 NAD dependent epimerase/dehydratase family CTM46_RS00910 PF00155 Aminotransferase class I and II CTM46_RS00925 PF01596 O-methyltransferase CTM46_RS00930 PF01220 Dehydroquinase class II CTM46_RS00935 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS00935 PF00589 Phage integrase family CTM46_RS00940 PF08543 Phosphomethylpyrimidine kinase CTM46_RS00940 PF02581 Thiamine monophosphate synthase CTM46_RS00980 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CTM46_RS00980 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CTM46_RS00980 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CTM46_RS00985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTM46_RS00990 PF00549 CoA-ligase CTM46_RS00990 PF08442 ATP-grasp domain CTM46_RS00995 PF00549 CoA-ligase CTM46_RS00995 PF02629 CoA binding domain CTM46_RS01030 PF09334 tRNA synthetases class I (M) CTM46_RS01030 PF08264 Anticodon-binding domain of tRNA CTM46_RS01030 PF01588 Putative tRNA binding domain CTM46_RS01065 PF04224 Protein of unknown function, DUF417 CTM46_RS01085 PF01883 Iron-sulfur cluster assembly protein CTM46_RS01090 PF12850 Calcineurin-like phosphoesterase superfamily domain CTM46_RS01095 PF03852 DNA mismatch endonuclease Vsr CTM46_RS01110 PF00483 Nucleotidyl transferase CTM46_RS01110 PF01050 Mannose-6-phosphate isomerase CTM46_RS01115 PF01230 HIT domain CTM46_RS01120 PF01272 Transcription elongation factor, GreA/GreB, C-term CTM46_RS01120 PF03449 Transcription elongation factor, N-terminal CTM46_RS01125 PF07549 SecD/SecF GG Motif CTM46_RS01125 PF02355 Protein export membrane protein CTM46_RS01140 PF00216 Bacterial DNA-binding protein CTM46_RS01150 PF01174 SNO glutamine amidotransferase family CTM46_RS01155 PF01680 SOR/SNZ family CTM46_RS01190 PF03577 Peptidase family C69 CTM46_RS01205 PF01255 Putative undecaprenyl diphosphate synthase CTM46_RS01230 PF01177 Asp/Glu/Hydantoin racemase CTM46_RS01240 PF01693 Caulimovirus viroplasmin CTM46_RS01250 PF03485 Arginyl tRNA synthetase N terminal domain CTM46_RS01250 PF05746 DALR anticodon binding domain CTM46_RS01250 PF00750 tRNA synthetases class I (R) CTM46_RS01255 PF00005 ABC transporter CTM46_RS01265 PF02652 L-lactate permease CTM46_RS01270 PF00919 Uncharacterized protein family UPF0004 CTM46_RS01270 PF01938 TRAM domain CTM46_RS01270 PF04055 Radical SAM superfamily CTM46_RS01275 PF00664 ABC transporter transmembrane region CTM46_RS01275 PF00005 ABC transporter CTM46_RS01300 PF04991 LicD family CTM46_RS01310 PF00266 Aminotransferase class-V CTM46_RS01315 PF01467 Cytidylyltransferase-like CTM46_RS01325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CTM46_RS01325 PF01872 RibD C-terminal domain CTM46_RS01330 PF17827 PrmC N-terminal domain CTM46_RS01330 PF05175 Methyltransferase small domain CTM46_RS01335 PF02631 RecX family CTM46_RS01350 PF00438 S-adenosylmethionine synthetase, N-terminal domain CTM46_RS01350 PF02773 S-adenosylmethionine synthetase, C-terminal domain CTM46_RS01350 PF02772 S-adenosylmethionine synthetase, central domain CTM46_RS01365 PF00825 Ribonuclease P CTM46_RS01370 PF01809 Putative membrane protein insertion efficiency factor CTM46_RS01375 PF00579 tRNA synthetases class I (W and Y) CTM46_RS01400 PF02824 TGS domain CTM46_RS01400 PF03129 Anticodon binding domain CTM46_RS01400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CTM46_RS01400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTM46_RS01405 PF02690 Na+/Pi-cotransporter CTM46_RS01410 PF00809 Pterin binding enzyme CTM46_RS01415 PF02457 DisA bacterial checkpoint controller nucleotide-binding CTM46_RS01430 PF01316 Arginine repressor, DNA binding domain CTM46_RS01430 PF02863 Arginine repressor, C-terminal domain CTM46_RS01435 PF00005 ABC transporter CTM46_RS01455 PF05649 Peptidase family M13 CTM46_RS01455 PF01431 Peptidase family M13 CTM46_RS01465 PF00501 AMP-binding enzyme CTM46_RS01470 PF03462 PCRF domain CTM46_RS01470 PF00472 RF-1 domain CTM46_RS01475 PF01928 CYTH domain CTM46_RS01515 PF00593 TonB dependent receptor CTM46_RS01515 PF07715 TonB-dependent Receptor Plug Domain CTM46_RS01520 PF03313 Serine dehydratase alpha chain CTM46_RS01525 PF08543 Phosphomethylpyrimidine kinase CTM46_RS01530 PF02581 Thiamine monophosphate synthase CTM46_RS01535 PF13667 ThiC-associated domain CTM46_RS01535 PF01964 Radical SAM ThiC family CTM46_RS01545 PF02581 Thiamine monophosphate synthase CTM46_RS01545 PF17792 ThiD2 family CTM46_RS01555 PF12821 Threonine/Serine exporter, ThrE CTM46_RS01555 PF06738 Putative threonine/serine exporter CTM46_RS01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTM46_RS01560 PF03466 LysR substrate binding domain CTM46_RS01570 PF00255 Glutathione peroxidase CTM46_RS01575 PF02146 Sir2 family CTM46_RS01580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTM46_RS01580 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CTM46_RS01585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTM46_RS01585 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CTM46_RS01590 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CTM46_RS01590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTM46_RS01595 PF13404 AsnC-type helix-turn-helix domain CTM46_RS01595 PF01037 Lrp/AsnC ligand binding domain CTM46_RS01600 PF01244 Membrane dipeptidase (Peptidase family M19) CTM46_RS01605 PF04389 Peptidase family M28 CTM46_RS01615 PF00072 Response regulator receiver domain CTM46_RS01615 PF04397 LytTr DNA-binding domain CTM46_RS01620 PF06580 Histidine kinase CTM46_RS01620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTM46_RS01620 PF07694 5TMR of 5TMR-LYT CTM46_RS01630 PF00156 Phosphoribosyl transferase domain CTM46_RS01640 PF00145 C-5 cytosine-specific DNA methylase CTM46_RS01645 PF09561 HpaII restriction endonuclease CTM46_RS01685 PF13335 Magnesium chelatase, subunit ChlI C-terminal CTM46_RS01685 PF01078 Magnesium chelatase, subunit ChlI CTM46_RS01690 PF06826 Predicted Permease Membrane Region CTM46_RS01690 PF02080 TrkA-C domain CTM46_RS01735 PF11066 Protein of unknown function (DUF2867) CTM46_RS01735 PF13460 NAD(P)H-binding CTM46_RS01740 PF00575 S1 RNA binding domain CTM46_RS01740 PF00773 RNB domain CTM46_RS01740 PF08206 Ribonuclease B OB domain CTM46_RS01740 PF17876 Cold shock domain CTM46_RS01750 PF00849 RNA pseudouridylate synthase CTM46_RS01775 PF04551 GcpE protein CTM46_RS01780 PF00731 AIR carboxylase CTM46_RS01790 PF04552 Sigma-54, DNA binding domain CTM46_RS01790 PF00309 Sigma-54 factor, Activator interacting domain (AID) CTM46_RS01790 PF04963 Sigma-54 factor, core binding domain CTM46_RS01805 PF04545 Sigma-70, region 4 CTM46_RS01805 PF04542 Sigma-70 region 2 CTM46_RS01830 PF13302 Acetyltransferase (GNAT) domain CTM46_RS01860 PF01725 Ham1 family CTM46_RS01865 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CTM46_RS01865 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CTM46_RS01870 PF09334 tRNA synthetases class I (M) CTM46_RS01870 PF13603 Leucyl-tRNA synthetase, Domain 2 CTM46_RS01870 PF08264 Anticodon-binding domain of tRNA CTM46_RS01890 PF00550 Phosphopantetheine attachment site CTM46_RS01895 PF02801 Beta-ketoacyl synthase, C-terminal domain CTM46_RS01895 PF00109 Beta-ketoacyl synthase, N-terminal domain CTM46_RS01900 PF14622 Ribonuclease-III-like CTM46_RS01900 PF00035 Double-stranded RNA binding motif CTM46_RS01905 PF01926 50S ribosome-binding GTPase CTM46_RS01905 PF06071 Protein of unknown function (DUF933) CTM46_RS01910 PF01790 Prolipoprotein diacylglyceryl transferase CTM46_RS01920 PF01624 MutS domain I CTM46_RS01920 PF05188 MutS domain II CTM46_RS01920 PF05192 MutS domain III CTM46_RS01920 PF00488 MutS domain V CTM46_RS01920 PF05190 MutS family domain IV CTM46_RS01925 PF01906 Putative heavy-metal-binding CTM46_RS01930 PF01406 tRNA synthetases class I (C) catalytic domain CTM46_RS01930 PF09190 DALR domain CTM46_RS01935 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CTM46_RS01935 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CTM46_RS01940 PF08032 RNA 2'-O ribose methyltransferase substrate binding CTM46_RS01940 PF00588 SpoU rRNA Methylase family CTM46_RS01945 PF02657 Fe-S metabolism associated domain CTM46_RS01955 PF01136 Peptidase family U32 CTM46_RS01960 PF01367 5'-3' exonuclease, C-terminal SAM fold CTM46_RS01960 PF01612 3'-5' exonuclease CTM46_RS01960 PF00476 DNA polymerase family A CTM46_RS01960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CTM46_RS01965 PF00348 Polyprenyl synthetase CTM46_RS01975 PF01791 DeoC/LacD family aldolase CTM46_RS01980 PF03819 MazG nucleotide pyrophosphohydrolase domain CTM46_RS01985 PF02580 D-Tyr-tRNA(Tyr) deacylase CTM46_RS01990 PF01541 GIY-YIG catalytic domain CTM46_RS01990 PF08459 UvrC Helix-hairpin-helix N-terminal CTM46_RS01995 PF00156 Phosphoribosyl transferase domain CTM46_RS02000 PF01134 Glucose inhibited division protein A CTM46_RS02000 PF13932 GidA associated domain CTM46_RS02015 PF00890 FAD binding domain CTM46_RS02015 PF02910 Fumarate reductase flavoprotein C-term CTM46_RS02020 PF13085 2Fe-2S iron-sulfur cluster binding domain CTM46_RS02030 PF01467 Cytidylyltransferase-like CTM46_RS02035 PF02130 Uncharacterized protein family UPF0054 CTM46_RS02045 PF13180 PDZ domain CTM46_RS02045 PF03572 Peptidase family S41 CTM46_RS02050 PF01751 Toprim domain CTM46_RS02050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTM46_RS02050 PF00204 DNA gyrase B CTM46_RS02050 PF00986 DNA gyrase B subunit, carboxyl terminus CTM46_RS02065 PF01427 D-ala-D-ala dipeptidase CTM46_RS02150 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS02150 PF00589 Phage integrase family CTM46_RS02155 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS02155 PF00589 Phage integrase family CTM46_RS02165 PF00872 Transposase, Mutator family CTM46_RS02170 PF00664 ABC transporter transmembrane region CTM46_RS02170 PF00005 ABC transporter CTM46_RS02175 PF00005 ABC transporter CTM46_RS02175 PF00664 ABC transporter transmembrane region CTM46_RS02230 PF13173 AAA domain CTM46_RS02230 PF13635 Domain of unknown function (DUF4143) CTM46_RS02270 PF02463 RecF/RecN/SMC N terminal domain CTM46_RS02295 PF14659 Phage integrase, N-terminal SAM-like domain CTM46_RS02295 PF00589 Phage integrase family CTM46_RS02305 PF12850 Calcineurin-like phosphoesterase superfamily domain CTM46_RS02315 PF02481 DNA recombination-mediator protein A CTM46_RS02335 PF01569 PAP2 superfamily CTM46_RS02340 PF05173 Dihydrodipicolinate reductase, C-terminus CTM46_RS02340 PF01113 Dihydrodipicolinate reductase, N-terminus CTM46_RS02345 PF10502 Signal peptidase, peptidase S26 CTM46_RS02350 PF08889 WbqC-like protein family CTM46_RS02370 PF13635 Domain of unknown function (DUF4143) CTM46_RS02370 PF13173 AAA domain CTM46_RS02385 PF18073 Rubredoxin metal binding domain CTM46_RS02405 PF08774 VRR-NUC domain CTM46_RS02405 PF04851 Type III restriction enzyme, res subunit CTM46_RS02410 PF01555 DNA methylase CTM46_RS02410 PF18273 Type III R-M EcoP15I C-terminal domain CTM46_RS02415 PF18273 Type III R-M EcoP15I C-terminal domain CTM46_RS02415 PF01555 DNA methylase CTM46_RS02430 PF01687 Riboflavin kinase CTM46_RS02430 PF06574 FAD synthetase CTM46_RS02530 PF12833 Helix-turn-helix domain CTM46_RS02540 PF08245 Mur ligase middle domain CTM46_RS02540 PF01225 Mur ligase family, catalytic domain CTM46_RS02540 PF02875 Mur ligase family, glutamate ligase domain CTM46_RS02550 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CTM46_RS02550 PF01138 3' exoribonuclease family, domain 1 CTM46_RS02550 PF03725 3' exoribonuclease family, domain 2 CTM46_RS02550 PF00013 KH domain CTM46_RS02550 PF00575 S1 RNA binding domain CTM46_RS02555 PF00403 Heavy-metal-associated domain CTM46_RS02570 PF01207 Dihydrouridine synthase (Dus) CTM46_RS02575 PF05496 Holliday junction DNA helicase RuvB P-loop domain CTM46_RS02575 PF05491 RuvB C-terminal winged helix domain CTM46_RS02575 PF17864 RuvB AAA lid domain CTM46_RS02590 PF08281 Sigma-70, region 4 CTM46_RS02590 PF04542 Sigma-70 region 2 CTM46_RS02605 PF13368 Topoisomerase C-terminal repeat CTM46_RS02605 PF01751 Toprim domain CTM46_RS02605 PF01131 DNA topoisomerase CTM46_RS02610 PF01202 Shikimate kinase CTM46_RS02615 PF17810 Arginine decarboxylase helical bundle domain CTM46_RS02615 PF17944 Arginine decarboxylase C-terminal helical extension CTM46_RS02615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CTM46_RS02620 PF04542 Sigma-70 region 2 CTM46_RS02620 PF08281 Sigma-70, region 4 CTM46_RS02630 PF04002 RadC-like JAB domain CTM46_RS02635 PF00535 Glycosyl transferase family 2 CTM46_RS02640 PF01132 Elongation factor P (EF-P) OB domain CTM46_RS02640 PF09285 Elongation factor P, C-terminal CTM46_RS02640 PF08207 Elongation factor P (EF-P) KOW-like domain CTM46_RS02645 PF00468 Ribosomal protein L34 CTM46_RS02655 PF00849 RNA pseudouridylate synthase CTM46_RS02655 PF01479 S4 domain CTM46_RS02660 PF07478 D-ala D-ala ligase C-terminus CTM46_RS02660 PF01820 D-ala D-ala ligase N-terminus CTM46_RS02685 PF12704 MacB-like periplasmic core domain CTM46_RS02685 PF02687 FtsX-like permease family CTM46_RS02690 PF02033 Ribosome-binding factor A CTM46_RS02695 PF16745 RsgA N-terminal domain CTM46_RS02695 PF03193 RsgA GTPase CTM46_RS02705 PF02386 Cation transport protein CTM46_RS02710 PF02080 TrkA-C domain CTM46_RS02710 PF02254 TrkA-N domain CTM46_RS02715 PF02780 Transketolase, C-terminal domain CTM46_RS02715 PF02779 Transketolase, pyrimidine binding domain CTM46_RS02715 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CTM46_RS02730 PF01027 Inhibitor of apoptosis-promoting Bax1 CTM46_RS02775 PF13734 Spi protease inhibitor CTM46_RS02775 PF01640 Peptidase C10 family CTM46_RS02785 PF00578 AhpC/TSA family CTM46_RS02805 PF00293 NUDIX domain CTM46_RS02805 PF09297 NADH pyrophosphatase zinc ribbon domain CTM46_RS02805 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CTM46_RS02810 PF13472 GDSL-like Lipase/Acylhydrolase family CTM46_RS02810 PF07859 alpha/beta hydrolase fold CTM46_RS02860 PF00690 Cation transporter/ATPase, N-terminus CTM46_RS02860 PF00689 Cation transporting ATPase, C-terminus CTM46_RS02865 PF02576 RimP N-terminal domain CTM46_RS02865 PF17384 RimP C-terminal SH3 domain CTM46_RS02870 PF00575 S1 RNA binding domain CTM46_RS02870 PF08529 NusA N-terminal domain CTM46_RS02870 PF13184 NusA-like KH domain CTM46_RS02875 PF04760 Translation initiation factor IF-2, N-terminal region CTM46_RS02875 PF11987 Translation-initiation factor 2 CTM46_RS02875 PF00009 Elongation factor Tu GTP binding domain CTM46_RS02880 PF01458 Uncharacterized protein family (UPF0051) CTM46_RS02890 PF00005 ABC transporter CTM46_RS02895 PF01458 Uncharacterized protein family (UPF0051) CTM46_RS02900 PF00266 Aminotransferase class-V CTM46_RS02910 PF01351 Ribonuclease HII CTM46_RS02920 PF00593 TonB dependent receptor CTM46_RS02920 PF07715 TonB-dependent Receptor Plug Domain CTM46_RS02945 PF00082 Subtilase family CTM46_RS02945 PF02225 PA domain CTM46_RS02945 PF13860 FlgD Ig-like domain CTM46_RS02945 PF05922 Peptidase inhibitor I9 CTM46_RS02955 PF13180 PDZ domain CTM46_RS02955 PF03572 Peptidase family S41 CTM46_RS02970 PF00343 Carbohydrate phosphorylase CTM46_RS02970 PF11897 Protein of unknown function (DUF3417) CTM46_RS02985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CTM46_RS03005 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CTM46_RS03005 PF01676 Metalloenzyme superfamily CTM46_RS03010 PF03167 Uracil DNA glycosylase superfamily CTM46_RS03015 PF03167 Uracil DNA glycosylase superfamily CTM46_RS03035 PF04542 Sigma-70 region 2 CTM46_RS03035 PF08281 Sigma-70, region 4 CTM46_RS03045 PF02565 Recombination protein O C terminal CTM46_RS03045 PF11967 Recombination protein O N terminal CTM46_RS03055 PF01649 Ribosomal protein S20 CTM46_RS03065 PF00986 DNA gyrase B subunit, carboxyl terminus CTM46_RS03065 PF01751 Toprim domain CTM46_RS03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTM46_RS03065 PF00204 DNA gyrase B CTM46_RS03075 PF00675 Insulinase (Peptidase family M16) CTM46_RS03075 PF05193 Peptidase M16 inactive domain CTM46_RS03090 PF12437 Glutamine synthetase type III N terminal CTM46_RS03090 PF00120 Glutamine synthetase, catalytic domain CTM46_RS03090 PF18318 Glutamine synthetase C-terminal domain CTM46_RS03105 PF02381 MraZ protein, putative antitoxin-like CTM46_RS03110 PF01795 MraW methylase family CTM46_RS03120 PF00905 Penicillin binding protein transpeptidase domain CTM46_RS03120 PF03717 Penicillin-binding Protein dimerisation domain CTM46_RS03125 PF02875 Mur ligase family, glutamate ligase domain CTM46_RS03125 PF01225 Mur ligase family, catalytic domain CTM46_RS03125 PF08245 Mur ligase middle domain CTM46_RS03130 PF00953 Glycosyl transferase family 4 CTM46_RS03135 PF08245 Mur ligase middle domain CTM46_RS03135 PF02875 Mur ligase family, glutamate ligase domain CTM46_RS03140 PF01098 Cell cycle protein CTM46_RS03145 PF03033 Glycosyltransferase family 28 N-terminal domain CTM46_RS03145 PF04101 Glycosyltransferase family 28 C-terminal domain CTM46_RS03150 PF08245 Mur ligase middle domain CTM46_RS03150 PF02875 Mur ligase family, glutamate ligase domain CTM46_RS03150 PF01225 Mur ligase family, catalytic domain CTM46_RS03160 PF02491 SHS2 domain inserted in FTSA CTM46_RS03165 PF00091 Tubulin/FtsZ family, GTPase domain CTM46_RS03165 PF12327 FtsZ family, C-terminal domain CTM46_RS03210 PF01293 Phosphoenolpyruvate carboxykinase CTM46_RS03235 PF00535 Glycosyl transferase family 2 CTM46_RS03240 PF00534 Glycosyl transferases group 1 CTM46_RS03240 PF13439 Glycosyltransferase Family 4 CTM46_RS03245 PF05970 PIF1-like helicase CTM46_RS03245 PF02689 Helicase CTM46_RS03260 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CTM46_RS03260 PF02769 AIR synthase related protein, C-terminal domain CTM46_RS03260 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CTM46_RS03280 PF00625 Guanylate kinase CTM46_RS03285 PF01467 Cytidylyltransferase-like CTM46_RS03295 PF00535 Glycosyl transferase family 2 CTM46_RS03315 PF01040 UbiA prenyltransferase family CTM46_RS03340 PF09827 CRISPR associated protein Cas2 CTM46_RS03350 PF13395 HNH endonuclease CTM46_RS03350 PF18541 RuvC endonuclease subdomain 3 CTM46_RS03350 PF18470 Cas9 alpha-helical lobe domain CTM46_RS03355 PF00206 Lyase CTM46_RS03355 PF10415 Fumarase C C-terminus CTM46_RS03365 PF00710 Asparaginase, N-terminal CTM46_RS03365 PF17763 Glutaminase/Asparaginase C-terminal domain CTM46_RS03370 PF03605 Anaerobic c4-dicarboxylate membrane transporter CTM46_RS03375 PF00578 AhpC/TSA family CTM46_RS03390 PF04225 Opacity-associated protein A LysM-like domain CTM46_RS03390 PF01551 Peptidase family M23 CTM46_RS03395 PF17191 RecG wedge domain CTM46_RS03395 PF00271 Helicase conserved C-terminal domain CTM46_RS03395 PF00270 DEAD/DEAH box helicase CTM46_RS03400 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTM46_RS03410 PF01513 ATP-NAD kinase CTM46_RS03415 PF00664 ABC transporter transmembrane region CTM46_RS03415 PF00005 ABC transporter CTM46_RS03430 PF01569 PAP2 superfamily CTM46_RS03455 PF00356 Bacterial regulatory proteins, lacI family CTM46_RS03460 PF07715 TonB-dependent Receptor Plug Domain CTM46_RS03460 PF00593 TonB dependent receptor CTM46_RS03475 PF07980 SusD family CTM46_RS03480 PF14292 SusE outer membrane protein CTM46_RS03480 PF16411 Outer membrane protein SusF_SusE CTM46_RS03500 PF00572 Ribosomal protein L13 CTM46_RS03505 PF00380 Ribosomal protein S9/S16 CTM46_RS03510 PF00318 Ribosomal protein S2 CTM46_RS03515 PF00889 Elongation factor TS CTM46_RS03525 PF01557 Fumarylacetoacetate (FAA) hydrolase family CTM46_RS03540 PF02542 YgbB family CTM46_RS03565 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTM46_RS03570 PF04991 LicD family CTM46_RS03575 PF02163 Peptidase family M50 CTM46_RS03575 PF17820 PDZ domain CTM46_RS03580 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CTM46_RS03580 PF13288 DXP reductoisomerase C-terminal domain CTM46_RS03580 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CTM46_RS03585 PF01782 RimM N-terminal domain CTM46_RS03590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CTM46_RS03600 PF00814 Glycoprotease family CTM46_RS03615 PF10438 Cyclo-malto-dextrinase C-terminal domain CTM46_RS03615 PF09087 Cyclomaltodextrinase, N-terminal CTM46_RS03615 PF00128 Alpha amylase, catalytic domain CTM46_RS03620 PF03714 Bacterial pullanase-associated domain CTM46_RS03620 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CTM46_RS03620 PF00128 Alpha amylase, catalytic domain CTM46_RS03625 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CTM46_RS03625 PF10566 Glycoside hydrolase 97 CTM46_RS03625 PF14508 Glycosyl-hydrolase 97 N-terminal CTM46_RS03630 PF02446 4-alpha-glucanotransferase CTM46_RS03650 PF08244 Glycosyl hydrolases family 32 C terminal CTM46_RS03650 PF00251 Glycosyl hydrolases family 32 N-terminal domain CTM46_RS03660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTM46_RS03660 PF12833 Helix-turn-helix domain CTM46_RS03660 PF07494 Two component regulator propeller CTM46_RS03660 PF00512 His Kinase A (phospho-acceptor) domain CTM46_RS03660 PF00072 Response regulator receiver domain CTM46_RS03660 PF07495 Y_Y_Y domain CTM46_RS03690 PF06397 Desulfoferrodoxin, N-terminal domain CTM46_RS03690 PF01880 Desulfoferrodoxin CTM46_RS03725 PF00916 Sulfate permease family CTM46_RS03725 PF01740 STAS domain CTM46_RS03745 PF13291 ACT domain CTM46_RS03745 PF02824 TGS domain CTM46_RS03745 PF04607 Region found in RelA / SpoT proteins CTM46_RS03750 PF01464 Transglycosylase SLT domain CTM46_RS03760 PF02195 ParB-like nuclease domain CTM46_RS03760 PF17762 HTH domain found in ParB protein CTM46_RS03765 PF13614 AAA domain CTM46_RS03770 PF01975 Survival protein SurE CTM46_RS03775 PF02684 Lipid-A-disaccharide synthetase CTM46_RS03785 PF09335 SNARE associated Golgi protein CTM46_RS03800 PF03129 Anticodon binding domain CTM46_RS03810 PF00521 DNA gyrase/topoisomerase IV, subunit A CTM46_RS03820 PF01471 Putative peptidoglycan binding domain CTM46_RS03820 PF03572 Peptidase family S41 CTM46_RS03820 PF17820 PDZ domain CTM46_RS03825 PF01268 Formate--tetrahydrofolate ligase CTM46_RS03830 PF05698 Bacterial trigger factor protein (TF) C-terminus CTM46_RS03830 PF05697 Bacterial trigger factor protein (TF) CTM46_RS03835 PF00574 Clp protease CTM46_RS03840 PF10431 C-terminal, D2-small domain, of ClpB protein CTM46_RS03840 PF07724 AAA domain (Cdc48 subfamily) CTM46_RS03840 PF06689 ClpX C4-type zinc finger CTM46_RS03845 PF09382 RQC domain CTM46_RS03845 PF00570 HRDC domain CTM46_RS03845 PF16124 RecQ zinc-binding CTM46_RS03845 PF00271 Helicase conserved C-terminal domain CTM46_RS03845 PF00270 DEAD/DEAH box helicase CTM46_RS03855 PF00589 Phage integrase family CTM46_RS03855 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS03865 PF00589 Phage integrase family CTM46_RS03865 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS03880 PF00571 CBS domain CTM46_RS03880 PF00478 IMP dehydrogenase / GMP reductase domain CTM46_RS03885 PF05698 Bacterial trigger factor protein (TF) C-terminus CTM46_RS03890 PF00639 PPIC-type PPIASE domain CTM46_RS03890 PF09312 SurA N-terminal domain CTM46_RS03905 PF01119 DNA mismatch repair protein, C-terminal domain CTM46_RS03905 PF08676 MutL C terminal dimerisation domain CTM46_RS03930 PF12848 ABC transporter CTM46_RS03930 PF00005 ABC transporter CTM46_RS03935 PF00005 ABC transporter CTM46_RS03935 PF12399 Branched-chain amino acid ATP-binding cassette transporter CTM46_RS03940 PF02405 Permease MlaE CTM46_RS03945 PF00005 ABC transporter CTM46_RS03955 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CTM46_RS03955 PF01926 50S ribosome-binding GTPase CTM46_RS03960 PF07650 KH domain CTM46_RS03960 PF01926 50S ribosome-binding GTPase CTM46_RS03965 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CTM46_RS03965 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CTM46_RS03970 PF01783 Ribosomal L32p protein family CTM46_RS03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTM46_RS03985 PF00512 His Kinase A (phospho-acceptor) domain CTM46_RS04000 PF01483 Proprotein convertase P-domain CTM46_RS04000 PF00082 Subtilase family CTM46_RS04020 PF02646 RmuC family CTM46_RS04025 PF00842 Alanine racemase, C-terminal domain CTM46_RS04025 PF01168 Alanine racemase, N-terminal domain CTM46_RS04085 PF12706 Beta-lactamase superfamily domain CTM46_RS04100 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS04100 PF00589 Phage integrase family CTM46_RS04105 PF14659 Phage integrase, N-terminal SAM-like domain CTM46_RS04105 PF00589 Phage integrase family CTM46_RS04110 PF03193 RsgA GTPase CTM46_RS04110 PF16745 RsgA N-terminal domain CTM46_RS04115 PF01765 Ribosome recycling factor CTM46_RS04125 PF00398 Ribosomal RNA adenine dimethylase CTM46_RS04135 PF07687 Peptidase dimerisation domain CTM46_RS04135 PF01546 Peptidase family M20/M25/M40 CTM46_RS04140 PF01544 CorA-like Mg2+ transporter protein CTM46_RS04160 PF17862 AAA+ lid domain CTM46_RS04160 PF01434 Peptidase family M41 CTM46_RS04160 PF00004 ATPase family associated with various cellular activities (AAA) CTM46_RS04170 PF07715 TonB-dependent Receptor Plug Domain CTM46_RS04170 PF00593 TonB dependent receptor CTM46_RS04220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTM46_RS04220 PF06580 Histidine kinase CTM46_RS04220 PF07694 5TMR of 5TMR-LYT CTM46_RS04225 PF04397 LytTr DNA-binding domain CTM46_RS04225 PF00072 Response regulator receiver domain CTM46_RS04230 PF04205 FMN-binding domain CTM46_RS04235 PF01118 Semialdehyde dehydrogenase, NAD binding domain CTM46_RS04235 PF02774 Semialdehyde dehydrogenase, dimerisation domain CTM46_RS04240 PF00999 Sodium/hydrogen exchanger family CTM46_RS04240 PF00582 Universal stress protein family CTM46_RS04245 PF00005 ABC transporter CTM46_RS04250 PF17783 CvfB-like winged helix domain CTM46_RS04250 PF13509 S1 domain CTM46_RS04270 PF03747 ADP-ribosylglycohydrolase CTM46_RS04285 PF03544 Gram-negative bacterial TonB protein C-terminal CTM46_RS04295 PF02472 Biopolymer transport protein ExbD/TolR CTM46_RS04305 PF00925 GTP cyclohydrolase II CTM46_RS04305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CTM46_RS04320 PF01638 HxlR-like helix-turn-helix CTM46_RS04340 PF00899 ThiF family CTM46_RS04350 PF14815 NUDIX domain CTM46_RS04350 PF00633 Helix-hairpin-helix motif CTM46_RS04350 PF00730 HhH-GPD superfamily base excision DNA repair protein CTM46_RS04355 PF02142 MGS-like domain CTM46_RS04355 PF01808 AICARFT/IMPCHase bienzyme CTM46_RS04375 PF03717 Penicillin-binding Protein dimerisation domain CTM46_RS04375 PF00905 Penicillin binding protein transpeptidase domain CTM46_RS04380 PF01098 Cell cycle protein CTM46_RS04385 PF13180 PDZ domain CTM46_RS04385 PF17820 PDZ domain CTM46_RS04400 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS04400 PF00589 Phage integrase family CTM46_RS04405 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS04405 PF00589 Phage integrase family CTM46_RS04465 PF01076 Plasmid recombination enzyme CTM46_RS04490 PF02559 CarD-like/TRCF domain CTM46_RS04490 PF17757 UvrB interaction domain CTM46_RS04490 PF03461 TRCF domain CTM46_RS04490 PF00271 Helicase conserved C-terminal domain CTM46_RS04490 PF00270 DEAD/DEAH box helicase CTM46_RS04505 PF07687 Peptidase dimerisation domain CTM46_RS04505 PF01546 Peptidase family M20/M25/M40 CTM46_RS04520 PF00223 Photosystem I psaA/psaB protein CTM46_RS04520 PF00691 OmpA family CTM46_RS04550 PF02683 Cytochrome C biogenesis protein transmembrane region CTM46_RS04550 PF11412 Disulphide bond corrector protein DsbC CTM46_RS04555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTM46_RS04570 PF14437 MafB19-like deaminase CTM46_RS04575 PF02021 Uncharacterised protein family UPF0102 CTM46_RS04580 PF02237 Biotin protein ligase C terminal domain CTM46_RS04580 PF03099 Biotin/lipoate A/B protein ligase family CTM46_RS04580 PF08279 HTH domain CTM46_RS04585 PF00696 Amino acid kinase family CTM46_RS04590 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CTM46_RS04595 PF00486 Transcriptional regulatory protein, C terminal CTM46_RS04595 PF00072 Response regulator receiver domain CTM46_RS04610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CTM46_RS04635 PF01066 CDP-alcohol phosphatidyltransferase CTM46_RS04640 PF02666 Phosphatidylserine decarboxylase CTM46_RS04645 PF02811 PHP domain CTM46_RS04645 PF14579 Helix-hairpin-helix motif CTM46_RS04645 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CTM46_RS04645 PF07733 Bacterial DNA polymerase III alpha NTPase domain CTM46_RS04645 PF01336 OB-fold nucleic acid binding domain CTM46_RS04650 PF00085 Thioredoxin CTM46_RS04665 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CTM46_RS04665 PF00132 Bacterial transferase hexapeptide (six repeats) CTM46_RS04675 PF00873 AcrB/AcrD/AcrF family CTM46_RS04680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTM46_RS04680 PF00529 HlyD membrane-fusion protein of T1SS CTM46_RS04685 PF01743 Poly A polymerase head domain CTM46_RS04685 PF13735 tRNA nucleotidyltransferase domain 2 putative CTM46_RS04685 PF12627 Probable RNA and SrmB- binding site of polymerase A CTM46_RS04705 PF02673 Bacitracin resistance protein BacA CTM46_RS04710 PF16198 tRNA pseudouridylate synthase B C-terminal domain CTM46_RS04710 PF01509 TruB family pseudouridylate synthase (N terminal domain) CTM46_RS04715 PF02547 Queuosine biosynthesis protein CTM46_RS04720 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CTM46_RS04725 PF00210 Ferritin-like domain CTM46_RS04735 PF00312 Ribosomal protein S15 CTM46_RS04740 PF14492 Elongation Factor G, domain II CTM46_RS04740 PF03144 Elongation factor Tu domain 2 CTM46_RS04740 PF00009 Elongation factor Tu GTP binding domain CTM46_RS04740 PF00679 Elongation factor G C-terminus CTM46_RS04760 PF02664 S-Ribosylhomocysteinase (LuxS) CTM46_RS04765 PF01048 Phosphorylase superfamily CTM46_RS04790 PF00121 Triosephosphate isomerase CTM46_RS04800 PF01227 GTP cyclohydrolase I CTM46_RS04805 PF03372 Endonuclease/Exonuclease/phosphatase family CTM46_RS04815 PF03062 MBOAT, membrane-bound O-acyltransferase family CTM46_RS04835 PF00860 Permease family CTM46_RS04840 PF00156 Phosphoribosyl transferase domain CTM46_RS04845 PF00593 TonB dependent receptor CTM46_RS04845 PF07715 TonB-dependent Receptor Plug Domain CTM46_RS04850 PF00501 AMP-binding enzyme CTM46_RS04850 PF13193 AMP-binding enzyme C-terminal domain CTM46_RS04855 PF00106 short chain dehydrogenase CTM46_RS04880 PF16360 GTP-binding GTPase Middle Region CTM46_RS04880 PF01926 50S ribosome-binding GTPase CTM46_RS04880 PF13167 GTP-binding GTPase N-terminal CTM46_RS04890 PF00675 Insulinase (Peptidase family M16) CTM46_RS04890 PF05193 Peptidase M16 inactive domain CTM46_RS04895 PF05683 Fumarase C-terminus CTM46_RS04895 PF05681 Fumarate hydratase (Fumerase) CTM46_RS04900 PF00881 Nitroreductase family CTM46_RS04905 PF03477 ATP cone domain CTM46_RS04905 PF02867 Ribonucleotide reductase, barrel domain CTM46_RS04905 PF00317 Ribonucleotide reductase, all-alpha domain CTM46_RS04910 PF02152 Dihydroneopterin aldolase CTM46_RS04915 PF01476 LysM domain CTM46_RS04915 PF01520 N-acetylmuramoyl-L-alanine amidase CTM46_RS04935 PF08299 Bacterial dnaA protein helix-turn-helix CTM46_RS04935 PF00308 Bacterial dnaA protein CTM46_RS04935 PF11638 DnaA N-terminal domain CTM46_RS04965 PF18389 TrmO C-terminal domain CTM46_RS04965 PF01980 tRNA-methyltransferase O CTM46_RS04975 PF02861 Clp amino terminal domain, pathogenicity island component CTM46_RS04975 PF00004 ATPase family associated with various cellular activities (AAA) CTM46_RS04975 PF07724 AAA domain (Cdc48 subfamily) CTM46_RS04975 PF17871 AAA lid domain CTM46_RS04975 PF10431 C-terminal, D2-small domain, of ClpB protein CTM46_RS05000 PF02401 LytB protein CTM46_RS05005 PF02086 D12 class N6 adenine-specific DNA methyltransferase CTM46_RS05010 PF04556 DpnII restriction endonuclease CTM46_RS05020 PF00082 Subtilase family CTM46_RS05020 PF02225 PA domain CTM46_RS05020 PF06280 Fn3-like domain CTM46_RS05025 PF02910 Fumarate reductase flavoprotein C-term CTM46_RS05025 PF00890 FAD binding domain CTM46_RS05030 PF02445 Quinolinate synthetase A protein CTM46_RS05035 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CTM46_RS05035 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CTM46_RS05040 PF00258 Flavodoxin CTM46_RS05070 PF01145 SPFH domain / Band 7 family CTM46_RS05075 PF02350 UDP-N-acetylglucosamine 2-epimerase CTM46_RS05090 PF01554 MatE CTM46_RS05095 PF00403 Heavy-metal-associated domain CTM46_RS05100 PF00403 Heavy-metal-associated domain CTM46_RS05105 PF00013 KH domain CTM46_RS05105 PF12072 Domain of unknown function (DUF3552) CTM46_RS05105 PF01966 HD domain CTM46_RS05125 PF00483 Nucleotidyl transferase CTM46_RS05130 PF13614 AAA domain CTM46_RS05135 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CTM46_RS05150 PF18152 DAHP synthase ferredoxin-like domain CTM46_RS05150 PF00793 DAHP synthetase I family CTM46_RS05165 PF01979 Amidohydrolase family CTM46_RS05170 PF00221 Aromatic amino acid lyase CTM46_RS05175 PF01175 Urocanase Rossmann-like domain CTM46_RS05175 PF17391 Urocanase N-terminal domain CTM46_RS05175 PF17392 Urocanase C-terminal domain CTM46_RS05180 PF02971 Formiminotransferase domain CTM46_RS05180 PF07837 Formiminotransferase domain, N-terminal subdomain CTM46_RS05185 PF01263 Aldose 1-epimerase CTM46_RS05200 PF00196 Bacterial regulatory proteins, luxR family CTM46_RS05205 PF00196 Bacterial regulatory proteins, luxR family CTM46_RS05205 PF17874 MalT-like TPR region CTM46_RS05210 PF13396 Phospholipase_D-nuclease N-terminal CTM46_RS05210 PF13091 PLD-like domain CTM46_RS05215 PF01380 SIS domain CTM46_RS05215 PF00571 CBS domain CTM46_RS05220 PF00793 DAHP synthetase I family CTM46_RS05230 PF01618 MotA/TolQ/ExbB proton channel family CTM46_RS05260 PF06421 GTP-binding protein LepA C-terminus CTM46_RS05260 PF00679 Elongation factor G C-terminus CTM46_RS05260 PF00009 Elongation factor Tu GTP binding domain CTM46_RS05260 PF03144 Elongation factor Tu domain 2 CTM46_RS05275 PF01343 Peptidase family S49 CTM46_RS05280 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CTM46_RS05285 PF01048 Phosphorylase superfamily CTM46_RS05290 PF02769 AIR synthase related protein, C-terminal domain CTM46_RS05290 PF00586 AIR synthase related protein, N-terminal domain CTM46_RS05305 PF13192 Thioredoxin domain CTM46_RS05305 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTM46_RS05310 PF10417 C-terminal domain of 1-Cys peroxiredoxin CTM46_RS05310 PF00578 AhpC/TSA family CTM46_RS05315 PF00113 Enolase, C-terminal TIM barrel domain CTM46_RS05315 PF03952 Enolase, N-terminal domain CTM46_RS05320 PF03466 LysR substrate binding domain CTM46_RS05320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTM46_RS05335 PF07676 WD40-like Beta Propeller Repeat CTM46_RS05335 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CTM46_RS05335 PF00326 Prolyl oligopeptidase family CTM46_RS05340 PF02096 60Kd inner membrane protein CTM46_RS05340 PF14849 YidC periplasmic domain CTM46_RS05345 PF06418 CTP synthase N-terminus CTM46_RS05345 PF00117 Glutamine amidotransferase class-I CTM46_RS05365 PF00953 Glycosyl transferase family 4 CTM46_RS05370 PF00535 Glycosyl transferase family 2 CTM46_RS05385 PF02350 UDP-N-acetylglucosamine 2-epimerase CTM46_RS05390 PF05045 Rhamnan synthesis protein F CTM46_RS05390 PF14307 Glycosyltransferase WbsX CTM46_RS05415 PF02397 Bacterial sugar transferase CTM46_RS05475 PF02589 LUD domain CTM46_RS05475 PF13183 4Fe-4S dicluster domain CTM46_RS05475 PF11870 Domain of unknown function (DUF3390) CTM46_RS05480 PF02754 Cysteine-rich domain CTM46_RS05485 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CTM46_RS05505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CTM46_RS05515 PF05523 WxcM-like, C-terminal CTM46_RS05520 PF16363 GDP-mannose 4,6 dehydratase CTM46_RS05555 PF03825 Nucleoside H+ symporter CTM46_RS05565 PF04452 RNA methyltransferase CTM46_RS05570 PF00593 TonB dependent receptor CTM46_RS05600 PF00854 POT family CTM46_RS05620 PF17760 UvrA interaction domain CTM46_RS05620 PF17755 UvrA DNA-binding domain CTM46_RS05630 PF04055 Radical SAM superfamily CTM46_RS05630 PF16199 Radical_SAM C-terminal domain CTM46_RS05635 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CTM46_RS05635 PF00326 Prolyl oligopeptidase family CTM46_RS05660 PF00535 Glycosyl transferase family 2 CTM46_RS05660 PF01501 Glycosyl transferase family 8 CTM46_RS05665 PF01501 Glycosyl transferase family 8 CTM46_RS05665 PF00535 Glycosyl transferase family 2 CTM46_RS05675 PF00535 Glycosyl transferase family 2 CTM46_RS05685 PF00365 Phosphofructokinase CTM46_RS05690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTM46_RS05690 PF02874 ATP synthase alpha/beta family, beta-barrel domain CTM46_RS05695 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CTM46_RS05705 PF00119 ATP synthase A chain CTM46_RS05710 PF00137 ATP synthase subunit C CTM46_RS05715 PF00430 ATP synthase B/B' CF(0) CTM46_RS05720 PF00213 ATP synthase delta (OSCP) subunit CTM46_RS05725 PF00306 ATP synthase alpha/beta chain, C terminal domain CTM46_RS05725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTM46_RS05725 PF02874 ATP synthase alpha/beta family, beta-barrel domain CTM46_RS05730 PF00231 ATP synthase CTM46_RS05750 PF00834 Ribulose-phosphate 3 epimerase family CTM46_RS05755 PF00218 Indole-3-glycerol phosphate synthase CTM46_RS05760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CTM46_RS05765 PF00117 Glutamine amidotransferase class-I CTM46_RS05800 PF00009 Elongation factor Tu GTP binding domain CTM46_RS05800 PF16658 Class II release factor RF3, C-terminal domain CTM46_RS05805 PF04321 RmlD substrate binding domain CTM46_RS05820 PF00480 ROK family CTM46_RS05830 PF08281 Sigma-70, region 4 CTM46_RS05830 PF04542 Sigma-70 region 2 CTM46_RS05845 PF02638 Glycosyl hydrolase-like 10 CTM46_RS05865 PF01746 tRNA (Guanine-1)-methyltransferase CTM46_RS05875 PF05195 Aminopeptidase P, N-terminal domain CTM46_RS05875 PF00557 Metallopeptidase family M24 CTM46_RS05885 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CTM46_RS05885 PF17768 RecJ OB domain CTM46_RS05885 PF02272 DHHA1 domain CTM46_RS05885 PF01368 DHH family CTM46_RS05890 PF09382 RQC domain CTM46_RS05890 PF00271 Helicase conserved C-terminal domain CTM46_RS05890 PF16124 RecQ zinc-binding CTM46_RS05890 PF00570 HRDC domain CTM46_RS05890 PF00270 DEAD/DEAH box helicase CTM46_RS05895 PF00166 Chaperonin 10 Kd subunit CTM46_RS05900 PF00118 TCP-1/cpn60 chaperonin family CTM46_RS05905 PF08713 DNA alkylation repair enzyme CTM46_RS05910 PF00133 tRNA synthetases class I (I, L, M and V) CTM46_RS05910 PF08264 Anticodon-binding domain of tRNA CTM46_RS05910 PF10458 Valyl tRNA synthetase tRNA binding arm CTM46_RS05915 PF03819 MazG nucleotide pyrophosphohydrolase domain CTM46_RS05925 PF12706 Beta-lactamase superfamily domain CTM46_RS05945 PF12833 Helix-turn-helix domain CTM46_RS05945 PF07495 Y_Y_Y domain CTM46_RS05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTM46_RS05945 PF00072 Response regulator receiver domain CTM46_RS05945 PF07494 Two component regulator propeller CTM46_RS05945 PF00512 His Kinase A (phospho-acceptor) domain CTM46_RS05960 PF17092 Penicillin-binding protein OB-like domain CTM46_RS05960 PF00905 Penicillin binding protein transpeptidase domain CTM46_RS05960 PF00912 Transglycosylase CTM46_RS05970 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CTM46_RS05970 PF00132 Bacterial transferase hexapeptide (six repeats) CTM46_RS05975 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CTM46_RS05975 PF07977 FabA-like domain CTM46_RS05980 PF00132 Bacterial transferase hexapeptide (six repeats) CTM46_RS05980 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CTM46_RS05985 PF01966 HD domain CTM46_RS05990 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CTM46_RS05995 PF03462 PCRF domain CTM46_RS05995 PF00472 RF-1 domain CTM46_RS06000 PF02769 AIR synthase related protein, C-terminal domain CTM46_RS06000 PF00586 AIR synthase related protein, N-terminal domain CTM46_RS06005 PF08501 Shikimate dehydrogenase substrate binding domain CTM46_RS06010 PF01209 ubiE/COQ5 methyltransferase family CTM46_RS06015 PF01259 SAICAR synthetase CTM46_RS06020 PF02562 PhoH-like protein CTM46_RS06025 PF00912 Transglycosylase CTM46_RS06030 PF13361 UvrD-like helicase C-terminal domain CTM46_RS06030 PF00580 UvrD/REP helicase N-terminal domain CTM46_RS06035 PF12705 PD-(D/E)XK nuclease superfamily CTM46_RS06040 PF13361 UvrD-like helicase C-terminal domain CTM46_RS06040 PF00580 UvrD/REP helicase N-terminal domain CTM46_RS06045 PF04371 Porphyromonas-type peptidyl-arginine deiminase CTM46_RS06050 PF00795 Carbon-nitrogen hydrolase CTM46_RS06060 PF14602 Hexapeptide repeat of succinyl-transferase CTM46_RS06060 PF12464 Maltose acetyltransferase CTM46_RS06060 PF00132 Bacterial transferase hexapeptide (six repeats) CTM46_RS06065 PF00849 RNA pseudouridylate synthase CTM46_RS06075 PF01556 DnaJ C terminal domain CTM46_RS06075 PF00226 DnaJ domain CTM46_RS06080 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CTM46_RS06090 PF14572 Phosphoribosyl synthetase-associated domain CTM46_RS06090 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CTM46_RS06120 PF01475 Ferric uptake regulator family CTM46_RS06125 PF00709 Adenylosuccinate synthetase CTM46_RS06130 PF13393 Histidyl-tRNA synthetase CTM46_RS06130 PF03129 Anticodon binding domain CTM46_RS06140 PF00633 Helix-hairpin-helix motif CTM46_RS06140 PF10576 Iron-sulfur binding domain of endonuclease III CTM46_RS06140 PF00730 HhH-GPD superfamily base excision DNA repair protein CTM46_RS06160 PF00356 Bacterial regulatory proteins, lacI family CTM46_RS06165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTM46_RS06165 PF01590 GAF domain CTM46_RS06165 PF08446 PAS fold CTM46_RS06165 PF00360 Phytochrome region CTM46_RS06165 PF00512 His Kinase A (phospho-acceptor) domain CTM46_RS06210 PF00436 Single-strand binding protein family CTM46_RS06215 PF00571 CBS domain CTM46_RS06215 PF03471 Transporter associated domain CTM46_RS06230 PF02806 Alpha amylase, C-terminal all-beta domain CTM46_RS06230 PF00128 Alpha amylase, catalytic domain CTM46_RS06230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CTM46_RS06240 PF02595 Glycerate kinase family CTM46_RS06250 PF02618 YceG-like family CTM46_RS06255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTM46_RS06255 PF00512 His Kinase A (phospho-acceptor) domain CTM46_RS06260 PF00072 Response regulator receiver domain CTM46_RS06260 PF00486 Transcriptional regulatory protein, C terminal CTM46_RS06270 PF01250 Ribosomal protein S6 CTM46_RS06275 PF01084 Ribosomal protein S18 CTM46_RS06280 PF01281 Ribosomal protein L9, N-terminal domain CTM46_RS06280 PF03948 Ribosomal protein L9, C-terminal domain CTM46_RS06290 PF05198 Translation initiation factor IF-3, N-terminal domain CTM46_RS06290 PF00707 Translation initiation factor IF-3, C-terminal domain CTM46_RS06295 PF01632 Ribosomal protein L35 CTM46_RS06300 PF00453 Ribosomal protein L20 CTM46_RS06305 PF00575 S1 RNA binding domain CTM46_RS06305 PF09371 Tex-like protein N-terminal domain CTM46_RS06305 PF16921 Tex protein YqgF-like domain CTM46_RS06305 PF17674 HHH domain CTM46_RS06310 PF12848 ABC transporter CTM46_RS06310 PF00005 ABC transporter CTM46_RS06310 PF16326 ABC transporter C-terminal domain CTM46_RS06315 PF05649 Peptidase family M13 CTM46_RS06315 PF01431 Peptidase family M13 CTM46_RS06335 PF00005 ABC transporter CTM46_RS06335 PF12848 ABC transporter CTM46_RS06340 PF01025 GrpE CTM46_RS06345 PF00226 DnaJ domain CTM46_RS06345 PF01556 DnaJ C terminal domain CTM46_RS06345 PF00684 DnaJ central domain CTM46_RS06350 PF08245 Mur ligase middle domain CTM46_RS06350 PF02875 Mur ligase family, glutamate ligase domain CTM46_RS06355 PF07690 Major Facilitator Superfamily CTM46_RS06360 PF01300 Telomere recombination CTM46_RS06370 PF00551 Formyl transferase CTM46_RS06370 PF02911 Formyl transferase, C-terminal domain CTM46_RS06375 PF02719 Polysaccharide biosynthesis protein CTM46_RS06385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CTM46_RS06400 PF02397 Bacterial sugar transferase CTM46_RS06405 PF00534 Glycosyl transferases group 1 CTM46_RS06405 PF13477 Glycosyl transferase 4-like CTM46_RS06410 PF13439 Glycosyltransferase Family 4 CTM46_RS06410 PF00534 Glycosyl transferases group 1 CTM46_RS06415 PF00535 Glycosyl transferase family 2 CTM46_RS06435 PF00535 Glycosyl transferase family 2 CTM46_RS06450 PF00535 Glycosyl transferase family 2 CTM46_RS06450 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 CTM46_RS06455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CTM46_RS06455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CTM46_RS06455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CTM46_RS06505 PF01370 NAD dependent epimerase/dehydratase family CTM46_RS06530 PF00581 Rhodanese-like domain CTM46_RS06530 PF17773 UPF0176 acylphosphatase like domain CTM46_RS06540 PF01451 Low molecular weight phosphotyrosine protein phosphatase CTM46_RS06545 PF03883 Peroxide stress protein YaaA CTM46_RS06560 PF13302 Acetyltransferase (GNAT) domain CTM46_RS06575 PF13662 Toprim domain CTM46_RS06575 PF02132 RecR protein CTM46_RS06585 PF02638 Glycosyl hydrolase-like 10 CTM46_RS06590 PF01037 Lrp/AsnC ligand binding domain CTM46_RS06600 PF05958 tRNA (Uracil-5-)-methyltransferase CTM46_RS06600 PF01938 TRAM domain CTM46_RS06620 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CTM46_RS06620 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CTM46_RS06620 PF12838 4Fe-4S dicluster domain CTM46_RS06620 PF10371 Domain of unknown function CTM46_RS06620 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CTM46_RS06620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTM46_RS06625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTM46_RS06625 PF03129 Anticodon binding domain CTM46_RS06625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CTM46_RS06625 PF02824 TGS domain CTM46_RS06650 PF01327 Polypeptide deformylase CTM46_RS06655 PF03652 Holliday junction resolvase CTM46_RS06685 PF02896 PEP-utilising enzyme, TIM barrel domain CTM46_RS06685 PF00391 PEP-utilising enzyme, mobile domain CTM46_RS06685 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CTM46_RS06700 PF01751 Toprim domain CTM46_RS06700 PF01131 DNA topoisomerase CTM46_RS06705 PF00691 OmpA family CTM46_RS06710 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CTM46_RS06710 PF01189 16S rRNA methyltransferase RsmB/F CTM46_RS06710 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CTM46_RS06715 PF00303 Thymidylate synthase CTM46_RS06720 PF00186 Dihydrofolate reductase CTM46_RS06725 PF06874 Firmicute fructose-1,6-bisphosphatase CTM46_RS06740 PF00742 Homoserine dehydrogenase CTM46_RS06740 PF00696 Amino acid kinase family CTM46_RS06740 PF03447 Homoserine dehydrogenase, NAD binding domain CTM46_RS06745 PF00005 ABC transporter CTM46_RS06775 PF12344 Ultra-violet resistance protein B CTM46_RS06775 PF00271 Helicase conserved C-terminal domain CTM46_RS06775 PF04851 Type III restriction enzyme, res subunit CTM46_RS06775 PF17757 UvrB interaction domain CTM46_RS06795 PF01040 UbiA prenyltransferase family CTM46_RS06805 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CTM46_RS06820 PF17755 UvrA DNA-binding domain CTM46_RS06820 PF17760 UvrA interaction domain CTM46_RS06830 PF00248 Aldo/keto reductase family CTM46_RS06840 PF00155 Aminotransferase class I and II CTM46_RS06845 PF00781 Diacylglycerol kinase catalytic domain CTM46_RS06850 PF05175 Methyltransferase small domain CTM46_RS06855 PF00004 ATPase family associated with various cellular activities (AAA) CTM46_RS06855 PF05362 Lon protease (S16) C-terminal proteolytic domain CTM46_RS06855 PF02190 ATP-dependent protease La (LON) substrate-binding domain CTM46_RS06860 PF01702 Queuine tRNA-ribosyltransferase CTM46_RS06870 PF00270 DEAD/DEAH box helicase CTM46_RS06870 PF00271 Helicase conserved C-terminal domain CTM46_RS06875 PF01039 Carboxyl transferase domain CTM46_RS06880 PF00364 Biotin-requiring enzyme CTM46_RS06890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTM46_RS06890 PF02403 Seryl-tRNA synthetase N-terminal domain CTM46_RS06895 PF00175 Oxidoreductase NAD-binding domain CTM46_RS06895 PF00970 Oxidoreductase FAD-binding domain CTM46_RS06895 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CTM46_RS06900 PF01048 Phosphorylase superfamily CTM46_RS06905 PF10396 GTP-binding protein TrmE N-terminus CTM46_RS06905 PF12631 MnmE helical domain CTM46_RS06905 PF01926 50S ribosome-binding GTPase CTM46_RS06915 PF08241 Methyltransferase domain CTM46_RS06920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CTM46_RS06930 PF03063 Prismane/CO dehydrogenase family CTM46_RS06945 PF01578 Cytochrome C assembly protein CTM46_RS06955 PF02335 Cytochrome c552 CTM46_RS06970 PF04343 Protein of unknown function, DUF488 CTM46_RS07000 PF04226 Transglycosylase associated protein CTM46_RS07005 PF01613 Flavin reductase like domain CTM46_RS07010 PF00749 tRNA synthetases class I (E and Q), catalytic domain CTM46_RS07010 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CTM46_RS07020 PF04539 Sigma-70 region 3 CTM46_RS07020 PF04545 Sigma-70, region 4 CTM46_RS07020 PF04542 Sigma-70 region 2 CTM46_RS07020 PF03979 Sigma-70 factor, region 1.1 CTM46_RS07020 PF00140 Sigma-70 factor, region 1.2 CTM46_RS07035 PF16363 GDP-mannose 4,6 dehydratase CTM46_RS07040 PF00483 Nucleotidyl transferase CTM46_RS07040 PF01050 Mannose-6-phosphate isomerase CTM46_RS07055 PF00152 tRNA synthetases class II (D, K and N) CTM46_RS07055 PF01336 OB-fold nucleic acid binding domain CTM46_RS07055 PF02938 GAD domain CTM46_RS07075 PF17932 Tetracyclin repressor-like, C-terminal domain CTM46_RS07075 PF00440 Bacterial regulatory proteins, tetR family CTM46_RS07080 PF00677 Lumazine binding domain CTM46_RS07085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CTM46_RS07085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTM46_RS07090 PF02347 Glycine cleavage system P-protein CTM46_RS07095 PF02347 Glycine cleavage system P-protein CTM46_RS07100 PF01597 Glycine cleavage H-protein CTM46_RS07105 PF01571 Aminomethyltransferase folate-binding domain CTM46_RS07105 PF08669 Glycine cleavage T-protein C-terminal barrel domain CTM46_RS07115 PF00886 Ribosomal protein S16 CTM46_RS07125 PF01183 Glycosyl hydrolases family 25 CTM46_RS07135 PF00300 Histidine phosphatase superfamily (branch 1) CTM46_RS07145 PF00485 Phosphoribulokinase / Uridine kinase family CTM46_RS07175 PF01197 Ribosomal protein L31 CTM46_RS07180 PF01223 DNA/RNA non-specific endonuclease CTM46_RS07205 PF00255 Glutathione peroxidase CTM46_RS07220 PF03630 Fumble CTM46_RS07225 PF00216 Bacterial DNA-binding protein CTM46_RS07230 PF00575 S1 RNA binding domain CTM46_RS07230 PF10150 Ribonuclease E/G family CTM46_RS07235 PF00593 TonB dependent receptor CTM46_RS07235 PF07715 TonB-dependent Receptor Plug Domain CTM46_RS07245 PF01136 Peptidase family U32 CTM46_RS07245 PF12392 Collagenase CTM46_RS07265 PF03932 CutC family CTM46_RS07285 PF13419 Haloacid dehalogenase-like hydrolase CTM46_RS07290 PF08497 Radical SAM N-terminal CTM46_RS07290 PF04055 Radical SAM superfamily CTM46_RS07290 PF11842 Domain of unknown function (DUF3362) CTM46_RS07315 PF00365 Phosphofructokinase CTM46_RS07320 PF01183 Glycosyl hydrolases family 25 CTM46_RS07360 PF00004 ATPase family associated with various cellular activities (AAA) CTM46_RS07360 PF12002 MgsA AAA+ ATPase C terminal CTM46_RS07360 PF16193 AAA C-terminal domain CTM46_RS07365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTM46_RS07365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTM46_RS07370 PF03458 UPF0126 domain CTM46_RS07390 PF01212 Beta-eliminating lyase CTM46_RS07395 PF03600 Citrate transporter CTM46_RS07400 PF00293 NUDIX domain CTM46_RS07410 PF12826 Helix-hairpin-helix motif CTM46_RS07410 PF03120 NAD-dependent DNA ligase OB-fold domain CTM46_RS07410 PF01653 NAD-dependent DNA ligase adenylation domain CTM46_RS07410 PF00533 BRCA1 C Terminus (BRCT) domain CTM46_RS07425 PF02881 SRP54-type protein, helical bundle domain CTM46_RS07425 PF02978 Signal peptide binding domain CTM46_RS07425 PF00448 SRP54-type protein, GTPase domain CTM46_RS07430 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CTM46_RS07430 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CTM46_RS07460 PF01389 OmpA-like transmembrane domain CTM46_RS07460 PF00691 OmpA family CTM46_RS07475 PF02780 Transketolase, C-terminal domain CTM46_RS07475 PF00456 Transketolase, thiamine diphosphate binding domain CTM46_RS07475 PF02779 Transketolase, pyrimidine binding domain CTM46_RS07480 PF02502 Ribose/Galactose Isomerase CTM46_RS07485 PF02887 Pyruvate kinase, alpha/beta domain CTM46_RS07485 PF00224 Pyruvate kinase, barrel domain CTM46_RS07505 PF00425 chorismate binding enzyme CTM46_RS07510 PF01063 Amino-transferase class IV CTM46_RS07535 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS07535 PF00589 Phage integrase family CTM46_RS07540 PF00589 Phage integrase family CTM46_RS07540 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS07580 PF00005 ABC transporter CTM46_RS07580 PF00664 ABC transporter transmembrane region CTM46_RS07580 PF03412 Peptidase C39 family CTM46_RS07620 PF00155 Aminotransferase class I and II CTM46_RS07645 PF01554 MatE CTM46_RS07665 PF00892 EamA-like transporter family CTM46_RS07670 PF01063 Amino-transferase class IV CTM46_RS07675 PF02609 Exonuclease VII small subunit CTM46_RS07680 PF13742 OB-fold nucleic acid binding domain CTM46_RS07680 PF02601 Exonuclease VII, large subunit CTM46_RS07690 PF00701 Dihydrodipicolinate synthetase family CTM46_RS07695 PF17763 Glutaminase/Asparaginase C-terminal domain CTM46_RS07695 PF00710 Asparaginase, N-terminal CTM46_RS07705 PF01380 SIS domain CTM46_RS07710 PF00156 Phosphoribosyl transferase domain CTM46_RS07715 PF00117 Glutamine amidotransferase class-I CTM46_RS07715 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CTM46_RS07720 PF02142 MGS-like domain CTM46_RS07720 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CTM46_RS07720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTM46_RS07735 PF04055 Radical SAM superfamily CTM46_RS07735 PF00919 Uncharacterized protein family UPF0004 CTM46_RS07735 PF01938 TRAM domain CTM46_RS07770 PF00535 Glycosyl transferase family 2 CTM46_RS07775 PF02424 ApbE family CTM46_RS07785 PF01432 Peptidase family M3 CTM46_RS07790 PF14437 MafB19-like deaminase CTM46_RS07795 PF13180 PDZ domain CTM46_RS07795 PF03572 Peptidase family S41 CTM46_RS07810 PF02463 RecF/RecN/SMC N terminal domain CTM46_RS07845 PF00158 Sigma-54 interaction domain CTM46_RS07845 PF00072 Response regulator receiver domain CTM46_RS07845 PF02954 Bacterial regulatory protein, Fis family CTM46_RS07860 PF03668 P-loop ATPase protein family CTM46_RS07865 PF12804 MobA-like NTP transferase domain CTM46_RS07870 PF02540 NAD synthase CTM46_RS07870 PF00958 GMP synthase C terminal domain CTM46_RS07870 PF00117 Glutamine amidotransferase class-I CTM46_RS07880 PF01741 Large-conductance mechanosensitive channel, MscL CTM46_RS07885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CTM46_RS07885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTM46_RS07910 PF00534 Glycosyl transferases group 1 CTM46_RS07910 PF13439 Glycosyltransferase Family 4 CTM46_RS07935 PF01640 Peptidase C10 family CTM46_RS07935 PF13734 Spi protease inhibitor CTM46_RS07945 PF01545 Cation efflux family CTM46_RS07950 PF01734 Patatin-like phospholipase CTM46_RS07955 PF02535 ZIP Zinc transporter CTM46_RS07960 PF01554 MatE CTM46_RS07970 PF02824 TGS domain CTM46_RS07970 PF03129 Anticodon binding domain CTM46_RS07970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CTM46_RS07970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTM46_RS07975 PF00128 Alpha amylase, catalytic domain CTM46_RS07980 PF00698 Acyl transferase domain CTM46_RS07985 PF01416 tRNA pseudouridine synthase CTM46_RS07990 PF13567 Domain of unknown function (DUF4131) CTM46_RS07990 PF03772 Competence protein CTM46_RS07990 PF00753 Metallo-beta-lactamase superfamily CTM46_RS07995 PF00501 AMP-binding enzyme CTM46_RS07995 PF13193 AMP-binding enzyme C-terminal domain CTM46_RS08000 PF12704 MacB-like periplasmic core domain CTM46_RS08000 PF02687 FtsX-like permease family CTM46_RS08025 PF01168 Alanine racemase, N-terminal domain CTM46_RS08035 PF03352 Methyladenine glycosylase CTM46_RS08040 PF00535 Glycosyl transferase family 2 CTM46_RS08040 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CTM46_RS08060 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CTM46_RS08060 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CTM46_RS08070 PF03989 DNA gyrase C-terminal domain, beta-propeller CTM46_RS08070 PF00521 DNA gyrase/topoisomerase IV, subunit A CTM46_RS08090 PF03880 DbpA RNA binding domain CTM46_RS08090 PF00271 Helicase conserved C-terminal domain CTM46_RS08090 PF00270 DEAD/DEAH box helicase CTM46_RS08095 PF00266 Aminotransferase class-V CTM46_RS08100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTM46_RS08100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTM46_RS08110 PF09186 Domain of unknown function (DUF1949) CTM46_RS08110 PF01205 Uncharacterized protein family UPF0029 CTM46_RS08120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTM46_RS08120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTM46_RS08120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTM46_RS08120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTM46_RS08130 PF07715 TonB-dependent Receptor Plug Domain CTM46_RS08130 PF00593 TonB dependent receptor CTM46_RS08150 PF01594 AI-2E family transporter CTM46_RS08155 PF00265 Thymidine kinase CTM46_RS08160 PF01238 Phosphomannose isomerase type I CTM46_RS08165 PF00270 DEAD/DEAH box helicase CTM46_RS08165 PF03880 DbpA RNA binding domain CTM46_RS08165 PF00271 Helicase conserved C-terminal domain CTM46_RS08180 PF16320 Ribosomal protein L7/L12 dimerisation domain CTM46_RS08180 PF00542 Ribosomal protein L7/L12 C-terminal domain CTM46_RS08205 PF05193 Peptidase M16 inactive domain CTM46_RS08205 PF00675 Insulinase (Peptidase family M16) CTM46_RS08210 PF09115 DNA polymerase III, delta subunit, C terminal CTM46_RS08215 PF04468 PSP1 C-terminal conserved region CTM46_RS08225 PF04539 Sigma-70 region 3 CTM46_RS08225 PF04545 Sigma-70, region 4 CTM46_RS08225 PF04542 Sigma-70 region 2 CTM46_RS08225 PF00140 Sigma-70 factor, region 1.2 CTM46_RS08225 PF03979 Sigma-70 factor, region 1.1 CTM46_RS08275 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CTM46_RS08285 PF04055 Radical SAM superfamily CTM46_RS08300 PF16363 GDP-mannose 4,6 dehydratase CTM46_RS08315 PF00149 Calcineurin-like phosphoesterase CTM46_RS08315 PF02872 5'-nucleotidase, C-terminal domain CTM46_RS08320 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CTM46_RS08320 PF00293 NUDIX domain CTM46_RS08320 PF09297 NADH pyrophosphatase zinc ribbon domain CTM46_RS08325 PF00860 Permease family CTM46_RS08335 PF00939 Sodium:sulfate symporter transmembrane region CTM46_RS08345 PF01032 FecCD transport family CTM46_RS08350 PF00860 Permease family CTM46_RS08360 PF00535 Glycosyl transferase family 2 CTM46_RS08365 PF03764 Elongation factor G, domain IV CTM46_RS08365 PF00679 Elongation factor G C-terminus CTM46_RS08365 PF00009 Elongation factor Tu GTP binding domain CTM46_RS08365 PF03144 Elongation factor Tu domain 2 CTM46_RS08365 PF14492 Elongation Factor G, domain II CTM46_RS08370 PF06969 HemN C-terminal domain CTM46_RS08370 PF04055 Radical SAM superfamily CTM46_RS08445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTM46_RS08450 PF01264 Chorismate synthase CTM46_RS08455 PF01180 Dihydroorotate dehydrogenase CTM46_RS08460 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CTM46_RS08460 PF00175 Oxidoreductase NAD-binding domain CTM46_RS08460 PF00970 Oxidoreductase FAD-binding domain CTM46_RS08490 PF01784 NIF3 (NGG1p interacting factor 3) CTM46_RS08495 PF07687 Peptidase dimerisation domain CTM46_RS08495 PF01546 Peptidase family M20/M25/M40 CTM46_RS08500 PF00999 Sodium/hydrogen exchanger family CTM46_RS08505 PF01699 Sodium/calcium exchanger protein CTM46_RS08530 PF00682 HMGL-like CTM46_RS08530 PF02436 Conserved carboxylase domain CTM46_RS08540 PF02080 TrkA-C domain CTM46_RS08540 PF06826 Predicted Permease Membrane Region CTM46_RS08550 PF00226 DnaJ domain CTM46_RS08550 PF05099 Tellurite resistance protein TerB CTM46_RS08555 PF00578 AhpC/TSA family CTM46_RS08565 PF14489 QueF-like protein CTM46_RS08570 PF00011 Hsp20/alpha crystallin family CTM46_RS08580 PF01121 Dephospho-CoA kinase CTM46_RS08590 PF02699 Preprotein translocase subunit CTM46_RS08595 PF01029 NusB family CTM46_RS08600 PF01386 Ribosomal L25p family CTM46_RS08600 PF14693 Ribosomal protein TL5, C-terminal domain CTM46_RS08605 PF01195 Peptidyl-tRNA hydrolase CTM46_RS08610 PF01479 S4 domain CTM46_RS08615 PF00551 Formyl transferase CTM46_RS08625 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CTM46_RS08630 PF00924 Mechanosensitive ion channel CTM46_RS08655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTM46_RS08655 PF02770 Acyl-CoA dehydrogenase, middle domain CTM46_RS08655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTM46_RS08660 PF01012 Electron transfer flavoprotein domain CTM46_RS08660 PF00766 Electron transfer flavoprotein FAD-binding domain CTM46_RS08665 PF01012 Electron transfer flavoprotein domain CTM46_RS08670 PF13419 Haloacid dehalogenase-like hydrolase CTM46_RS08675 PF00342 Phosphoglucose isomerase CTM46_RS08680 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CTM46_RS08680 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CTM46_RS08685 PF01336 OB-fold nucleic acid binding domain CTM46_RS08685 PF00152 tRNA synthetases class II (D, K and N) CTM46_RS08685 PF14229 Domain of unknown function (DUF4332) CTM46_RS08700 PF03061 Thioesterase superfamily CTM46_RS08705 PF00425 chorismate binding enzyme CTM46_RS08710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTM46_RS08715 PF00378 Enoyl-CoA hydratase/isomerase CTM46_RS08725 PF00501 AMP-binding enzyme CTM46_RS08725 PF13193 AMP-binding enzyme C-terminal domain CTM46_RS08725 PF00668 Condensation domain CTM46_RS08725 PF00550 Phosphopantetheine attachment site CTM46_RS08730 PF01761 3-dehydroquinate synthase CTM46_RS08745 PF02142 MGS-like domain CTM46_RS08745 PF01808 AICARFT/IMPCHase bienzyme CTM46_RS08760 PF03330 Lytic transglycolase CTM46_RS08760 PF05036 Sporulation related domain CTM46_RS08765 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CTM46_RS08765 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CTM46_RS08770 PF05188 MutS domain II CTM46_RS08770 PF01624 MutS domain I CTM46_RS08770 PF05190 MutS family domain IV CTM46_RS08770 PF05192 MutS domain III CTM46_RS08770 PF00488 MutS domain V CTM46_RS08785 PF00206 Lyase CTM46_RS08785 PF08328 Adenylosuccinate lyase C-terminal CTM46_RS08790 PF01479 S4 domain CTM46_RS08790 PF00849 RNA pseudouridylate synthase CTM46_RS08795 PF01336 OB-fold nucleic acid binding domain CTM46_RS08795 PF00152 tRNA synthetases class II (D, K and N) CTM46_RS08800 PF03781 Sulfatase-modifying factor enzyme 1 CTM46_RS08820 PF01330 RuvA N terminal domain CTM46_RS08820 PF07499 RuvA, C-terminal domain CTM46_RS08855 PF00589 Phage integrase family CTM46_RS08855 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS08860 PF00589 Phage integrase family CTM46_RS08860 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS08870 PF01131 DNA topoisomerase CTM46_RS08870 PF01751 Toprim domain CTM46_RS08880 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CTM46_RS08900 PF00589 Phage integrase family CTM46_RS08905 PF08281 Sigma-70, region 4 CTM46_RS08905 PF00665 Integrase core domain CTM46_RS08910 PF01695 IstB-like ATP binding protein CTM46_RS09065 PF00589 Phage integrase family CTM46_RS09065 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS09075 PF02390 Putative methyltransferase CTM46_RS09085 PF00082 Subtilase family CTM46_RS09085 PF05922 Peptidase inhibitor I9 CTM46_RS09120 PF00005 ABC transporter CTM46_RS09120 PF00664 ABC transporter transmembrane region CTM46_RS09125 PF00664 ABC transporter transmembrane region CTM46_RS09125 PF00005 ABC transporter CTM46_RS09125 PF08021 Siderophore-interacting FAD-binding domain CTM46_RS09125 PF04954 Siderophore-interacting protein CTM46_RS09145 PF00085 Thioredoxin CTM46_RS09155 PF01475 Ferric uptake regulator family CTM46_RS09185 PF02384 N-6 DNA Methylase CTM46_RS09190 PF01420 Type I restriction modification DNA specificity domain CTM46_RS09195 PF11867 Domain of unknown function (DUF3387) CTM46_RS09195 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CTM46_RS09195 PF18766 SWI2/SNF2 ATPase CTM46_RS09240 PF01042 Endoribonuclease L-PSP CTM46_RS09285 PF13173 AAA domain CTM46_RS09285 PF13635 Domain of unknown function (DUF4143) CTM46_RS09330 PF08126 Propeptide_C25 CTM46_RS09330 PF03785 Peptidase family C25, C terminal ig-like domain CTM46_RS09330 PF01364 Peptidase family C25 CTM46_RS09330 PF10365 Domain of unknown function (DUF2436) CTM46_RS09330 PF07675 Cleaved Adhesin Domain CTM46_RS09345 PF13443 Cro/C1-type HTH DNA-binding domain CTM46_RS09350 PF00675 Insulinase (Peptidase family M16) CTM46_RS09350 PF05193 Peptidase M16 inactive domain CTM46_RS09360 PF00593 TonB dependent receptor CTM46_RS09360 PF07715 TonB-dependent Receptor Plug Domain CTM46_RS09365 PF02514 CobN/Magnesium Chelatase CTM46_RS09365 PF11965 Domain of unknown function (DUF3479) CTM46_RS09405 PF03577 Peptidase family C69 CTM46_RS09410 PF01551 Peptidase family M23 CTM46_RS09410 PF04225 Opacity-associated protein A LysM-like domain CTM46_RS09425 PF01252 Signal peptidase (SPase) II CTM46_RS09435 PF08264 Anticodon-binding domain of tRNA CTM46_RS09435 PF00133 tRNA synthetases class I (I, L, M and V) CTM46_RS09465 PF01522 Polysaccharide deacetylase CTM46_RS09470 PF08331 Domain of unknown function (DUF1730) CTM46_RS09475 PF01640 Peptidase C10 family CTM46_RS09475 PF13734 Spi protease inhibitor CTM46_RS09535 PF00580 UvrD/REP helicase N-terminal domain CTM46_RS09535 PF13361 UvrD-like helicase C-terminal domain CTM46_RS09540 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CTM46_RS09540 PF00326 Prolyl oligopeptidase family CTM46_RS09565 PF00004 ATPase family associated with various cellular activities (AAA) CTM46_RS09565 PF17871 AAA lid domain CTM46_RS09565 PF02861 Clp amino terminal domain, pathogenicity island component CTM46_RS09565 PF10431 C-terminal, D2-small domain, of ClpB protein CTM46_RS09565 PF07724 AAA domain (Cdc48 subfamily) CTM46_RS09580 PF08323 Starch synthase catalytic domain CTM46_RS09580 PF00534 Glycosyl transferases group 1 CTM46_RS09585 PF02569 Pantoate-beta-alanine ligase CTM46_RS09590 PF02261 Aspartate decarboxylase CTM46_RS09600 PF12102 Domain of unknown function (DUF3578) CTM46_RS09600 PF07728 AAA domain (dynein-related subfamily) CTM46_RS09625 PF01016 Ribosomal L27 protein CTM46_RS09630 PF00829 Ribosomal prokaryotic L21 protein CTM46_RS09645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CTM46_RS09645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTM46_RS09665 PF00871 Acetokinase family CTM46_RS09670 PF01515 Phosphate acetyl/butaryl transferase CTM46_RS09695 PF01625 Peptide methionine sulfoxide reductase CTM46_RS09695 PF01641 SelR domain CTM46_RS09700 PF00210 Ferritin-like domain CTM46_RS09715 PF01883 Iron-sulfur cluster assembly protein CTM46_RS09715 PF10609 NUBPL iron-transfer P-loop NTPase CTM46_RS09765 PF01979 Amidohydrolase family CTM46_RS09785 PF12169 DNA polymerase III subunits gamma and tau domain III CTM46_RS09800 PF07726 ATPase family associated with various cellular activities (AAA) CTM46_RS09800 PF17863 AAA lid domain CTM46_RS09805 PF01882 Protein of unknown function DUF58 CTM46_RS09815 PF07584 Aerotolerance regulator N-terminal CTM46_RS09815 PF13519 von Willebrand factor type A domain CTM46_RS09820 PF07584 Aerotolerance regulator N-terminal CTM46_RS09820 PF13519 von Willebrand factor type A domain CTM46_RS09835 PF01569 PAP2 superfamily CTM46_RS09840 PF02547 Queuosine biosynthesis protein CTM46_RS09850 PF02540 NAD synthase CTM46_RS09850 PF00795 Carbon-nitrogen hydrolase CTM46_RS09870 PF00390 Malic enzyme, N-terminal domain CTM46_RS09870 PF03949 Malic enzyme, NAD binding domain CTM46_RS09870 PF01515 Phosphate acetyl/butaryl transferase CTM46_RS09875 PF00440 Bacterial regulatory proteins, tetR family CTM46_RS09880 PF13291 ACT domain CTM46_RS09880 PF04607 Region found in RelA / SpoT proteins CTM46_RS09880 PF02824 TGS domain CTM46_RS09965 PF02901 Pyruvate formate lyase-like CTM46_RS09965 PF01228 Glycine radical CTM46_RS09970 PF04055 Radical SAM superfamily CTM46_RS09975 PF01575 MaoC like domain CTM46_RS09990 PF02915 Rubrerythrin CTM46_RS10025 PF04023 FeoA domain CTM46_RS10025 PF07664 Ferrous iron transport protein B C terminus CTM46_RS10025 PF02421 Ferrous iron transport protein B CTM46_RS10025 PF17910 FeoB cytosolic helical domain CTM46_RS10025 PF07670 Nucleoside recognition CTM46_RS10030 PF03601 Conserved hypothetical protein 698 CTM46_RS10040 PF00691 OmpA family CTM46_RS10040 PF04972 BON domain CTM46_RS10045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTM46_RS10045 PF09180 Prolyl-tRNA synthetase, C-terminal CTM46_RS10045 PF03129 Anticodon binding domain CTM46_RS10055 PF08032 RNA 2'-O ribose methyltransferase substrate binding CTM46_RS10055 PF00588 SpoU rRNA Methylase family CTM46_RS10080 PF18073 Rubredoxin metal binding domain CTM46_RS10095 PF00005 ABC transporter CTM46_RS10095 PF16326 ABC transporter C-terminal domain CTM46_RS10095 PF12848 ABC transporter CTM46_RS10100 PF01926 50S ribosome-binding GTPase CTM46_RS10105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTM46_RS10105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTM46_RS10105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTM46_RS10105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTM46_RS10120 PF00301 Rubredoxin CTM46_RS10125 PF00994 Probable molybdopterin binding domain CTM46_RS10125 PF02464 Competence-damaged protein CTM46_RS10125 PF18146 Damage-inducible protein CinA KH domain CTM46_RS10130 PF00814 Glycoprotease family CTM46_RS10135 PF00557 Metallopeptidase family M24 CTM46_RS10165 PF07687 Peptidase dimerisation domain CTM46_RS10165 PF01546 Peptidase family M20/M25/M40 CTM46_RS10190 PF00912 Transglycosylase CTM46_RS10190 PF00905 Penicillin binding protein transpeptidase domain CTM46_RS10195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CTM46_RS10195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CTM46_RS10200 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CTM46_RS10200 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CTM46_RS10205 PF00464 Serine hydroxymethyltransferase CTM46_RS10220 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CTM46_RS10220 PF11973 NQRA C-terminal domain CTM46_RS10225 PF03116 NQR2, RnfD, RnfE family CTM46_RS10230 PF04205 FMN-binding domain CTM46_RS10235 PF02508 Rnf-Nqr subunit, membrane protein CTM46_RS10240 PF02508 Rnf-Nqr subunit, membrane protein CTM46_RS10245 PF00175 Oxidoreductase NAD-binding domain CTM46_RS10245 PF00970 Oxidoreductase FAD-binding domain CTM46_RS10245 PF00111 2Fe-2S iron-sulfur cluster binding domain CTM46_RS10385 PF02861 Clp amino terminal domain, pathogenicity island component CTM46_RS10385 PF10431 C-terminal, D2-small domain, of ClpB protein CTM46_RS10385 PF17871 AAA lid domain CTM46_RS10385 PF07724 AAA domain (Cdc48 subfamily) CTM46_RS10385 PF00004 ATPase family associated with various cellular activities (AAA) CTM46_RS10445 PF04542 Sigma-70 region 2 CTM46_RS10445 PF00140 Sigma-70 factor, region 1.2 CTM46_RS10445 PF03979 Sigma-70 factor, region 1.1 CTM46_RS10445 PF04539 Sigma-70 region 3 CTM46_RS10445 PF04545 Sigma-70, region 4 CTM46_RS10450 PF02926 THUMP domain CTM46_RS10450 PF01170 Putative RNA methylase family UPF0020 CTM46_RS10455 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CTM46_RS10455 PF00326 Prolyl oligopeptidase family CTM46_RS10460 PF02844 Phosphoribosylglycinamide synthetase, N domain CTM46_RS10460 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CTM46_RS10460 PF02843 Phosphoribosylglycinamide synthetase, C domain CTM46_RS10470 PF07670 Nucleoside recognition CTM46_RS10480 PF10459 Peptidase S46 CTM46_RS10500 PF05681 Fumarate hydratase (Fumerase) CTM46_RS10520 PF07476 Methylaspartate ammonia-lyase C-terminus CTM46_RS10520 PF05034 Methylaspartate ammonia-lyase N-terminus CTM46_RS10525 PF06368 Methylaspartate mutase E chain (MutE) CTM46_RS10530 PF13941 MutL protein CTM46_RS10535 PF02310 B12 binding domain CTM46_RS10540 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CTM46_RS10540 PF01476 LysM domain CTM46_RS10550 PF00575 S1 RNA binding domain CTM46_RS10555 PF01668 SmpB protein CTM46_RS10580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTM46_RS10580 PF07497 Rho termination factor, RNA-binding domain CTM46_RS10585 PF03313 Serine dehydratase alpha chain CTM46_RS10585 PF03315 Serine dehydratase beta chain CTM46_RS10600 PF02590 Predicted SPOUT methyltransferase CTM46_RS10610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTM46_RS10610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTM46_RS10610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTM46_RS10610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTM46_RS10615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CTM46_RS10620 PF07683 Cobalamin synthesis protein cobW C-terminal domain CTM46_RS10620 PF02492 CobW/HypB/UreG, nucleotide-binding domain CTM46_RS10635 PF01654 Cytochrome bd terminal oxidase subunit I CTM46_RS10650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTM46_RS10670 PF00106 short chain dehydrogenase CTM46_RS10680 PF01479 S4 domain CTM46_RS10680 PF00849 RNA pseudouridylate synthase CTM46_RS10690 PF00440 Bacterial regulatory proteins, tetR family CTM46_RS10690 PF08361 MAATS-type transcriptional repressor, C-terminal region CTM46_RS10705 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CTM46_RS10705 PF01409 tRNA synthetases class II core domain (F) CTM46_RS10715 PF00132 Bacterial transferase hexapeptide (six repeats) CTM46_RS10720 PF02545 Maf-like protein CTM46_RS10745 PF01209 ubiE/COQ5 methyltransferase family CTM46_RS10750 PF02348 Cytidylyltransferase CTM46_RS10760 PF02881 SRP54-type protein, helical bundle domain CTM46_RS10760 PF00448 SRP54-type protein, GTPase domain CTM46_RS10765 PF04055 Radical SAM superfamily CTM46_RS10765 PF00919 Uncharacterized protein family UPF0004 CTM46_RS10765 PF18693 TRAM domain CTM46_RS10770 PF00216 Bacterial DNA-binding protein CTM46_RS10790 PF02075 Crossover junction endodeoxyribonuclease RuvC CTM46_RS10795 PF00753 Metallo-beta-lactamase superfamily CTM46_RS10800 PF02527 rRNA small subunit methyltransferase G CTM46_RS10810 PF13419 Haloacid dehalogenase-like hydrolase CTM46_RS10815 PF02548 Ketopantoate hydroxymethyltransferase CTM46_RS10820 PF00890 FAD binding domain CTM46_RS10820 PF04205 FMN-binding domain CTM46_RS10820 PF03358 NADPH-dependent FMN reductase CTM46_RS10825 PF04055 Radical SAM superfamily CTM46_RS10840 PF00885 6,7-dimethyl-8-ribityllumazine synthase CTM46_RS10855 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTM46_RS10860 PF01712 Deoxynucleoside kinase CTM46_RS10870 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase CTM46_RS10885 PF01432 Peptidase family M3 CTM46_RS10905 PF07687 Peptidase dimerisation domain CTM46_RS10905 PF01546 Peptidase family M20/M25/M40 CTM46_RS10955 PF00005 ABC transporter CTM46_RS10985 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CTM46_RS10990 PF01713 Smr domain CTM46_RS10990 PF00488 MutS domain V CTM46_RS10995 PF01171 PP-loop family CTM46_RS11000 PF10672 S-adenosylmethionine-dependent methyltransferase CTM46_RS11000 PF17785 PUA-like domain CTM46_RS11010 PF01580 FtsK/SpoIIIE family CTM46_RS11010 PF09397 Ftsk gamma domain CTM46_RS11010 PF17854 FtsK alpha domain CTM46_RS11010 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CTM46_RS11030 PF03631 Virulence factor BrkB CTM46_RS11040 PF00183 Hsp90 protein CTM46_RS11045 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CTM46_RS11045 PF12557 Cob(I)alamin adenosyltransferase N terminal CTM46_RS11055 PF03796 DnaB-like helicase C terminal domain CTM46_RS11055 PF00772 DnaB-like helicase N terminal domain CTM46_RS11060 PF00288 GHMP kinases N terminal domain CTM46_RS11060 PF08544 GHMP kinases C terminal CTM46_RS11080 PF00830 Ribosomal L28 family CTM46_RS11085 PF00471 Ribosomal protein L33 CTM46_RS11140 PF01043 SecA preprotein cross-linking domain CTM46_RS11140 PF02810 SEC-C motif CTM46_RS11140 PF07516 SecA Wing and Scaffold domain CTM46_RS11140 PF07517 SecA DEAD-like domain CTM46_RS11165 PF03471 Transporter associated domain CTM46_RS11165 PF00571 CBS domain CTM46_RS11185 PF02224 Cytidylate kinase CTM46_RS11195 PF03544 Gram-negative bacterial TonB protein C-terminal CTM46_RS11200 PF00348 Polyprenyl synthetase CTM46_RS11210 PF01026 TatD related DNase CTM46_RS11220 PF03483 B3/4 domain CTM46_RS11220 PF03147 Ferredoxin-fold anticodon binding domain CTM46_RS11220 PF03484 tRNA synthetase B5 domain CTM46_RS11220 PF01588 Putative tRNA binding domain CTM46_RS11220 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CTM46_RS11225 PF01709 Transcriptional regulator CTM46_RS11245 PF00712 DNA polymerase III beta subunit, N-terminal domain CTM46_RS11245 PF02767 DNA polymerase III beta subunit, central domain CTM46_RS11245 PF02768 DNA polymerase III beta subunit, C-terminal domain CTM46_RS11250 PF00929 Exonuclease CTM46_RS11250 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CTM46_RS11250 PF14480 DNA polymerase III polC-type N-terminus I CTM46_RS11250 PF07733 Bacterial DNA polymerase III alpha NTPase domain CTM46_RS11250 PF11490 DNA polymerase III polC-type N-terminus II CTM46_RS11250 PF14579 Helix-hairpin-helix motif CTM46_RS11250 PF02811 PHP domain CTM46_RS11255 PF02441 Flavoprotein CTM46_RS11255 PF04127 DNA / pantothenate metabolism flavoprotein CTM46_RS11265 PF13476 AAA domain CTM46_RS11315 PF12680 SnoaL-like domain CTM46_RS11315 PF08281 Sigma-70, region 4 CTM46_RS11315 PF04542 Sigma-70 region 2 CTM46_RS11335 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CTM46_RS11340 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CTM46_RS11345 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CTM46_RS11345 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CTM46_RS11350 PF00146 NADH dehydrogenase CTM46_RS11355 PF12838 4Fe-4S dicluster domain CTM46_RS11365 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CTM46_RS11370 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CTM46_RS11370 PF00361 Proton-conducting membrane transporter CTM46_RS11370 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CTM46_RS11375 PF00361 Proton-conducting membrane transporter CTM46_RS11380 PF00361 Proton-conducting membrane transporter CTM46_RS11520 PF00872 Transposase, Mutator family CTM46_RS11530 PF13542 Helix-turn-helix domain of transposase family ISL3 CTM46_RS11530 PF01610 Transposase CTM46_RS11530 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CTM46_RS11535 PF00082 Subtilase family CTM46_RS11545 PF05922 Peptidase inhibitor I9 CTM46_RS11545 PF00082 Subtilase family CTM46_RS11550 PF01638 HxlR-like helix-turn-helix CTM46_RS11555 PF13460 NAD(P)H-binding CTM46_RS11575 PF16353 Domain of unknown function(DUF4981) CTM46_RS11575 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CTM46_RS11575 PF02837 Glycosyl hydrolases family 2, sugar binding domain CTM46_RS11575 PF02929 Beta galactosidase small chain CTM46_RS11575 PF00703 Glycosyl hydrolases family 2 CTM46_RS11635 PF13361 UvrD-like helicase C-terminal domain CTM46_RS11635 PF00580 UvrD/REP helicase N-terminal domain CTM46_RS11655 PF00440 Bacterial regulatory proteins, tetR family CTM46_RS11655 PF08361 MAATS-type transcriptional repressor, C-terminal region CTM46_RS11665 PF00082 Subtilase family CTM46_RS11675 PF00082 Subtilase family CTM46_RS11700 PF00589 Phage integrase family CTM46_RS11700 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS11705 PF00589 Phage integrase family CTM46_RS11705 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS11715 PF01751 Toprim domain CTM46_RS11715 PF01131 DNA topoisomerase CTM46_RS11725 PF01593 Flavin containing amine oxidoreductase CTM46_RS11735 PF00535 Glycosyl transferase family 2 CTM46_RS11750 PF00293 NUDIX domain CTM46_RS11765 PF04397 LytTr DNA-binding domain CTM46_RS11765 PF00072 Response regulator receiver domain CTM46_RS11770 PF07694 5TMR of 5TMR-LYT CTM46_RS11770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTM46_RS11770 PF06580 Histidine kinase CTM46_RS11780 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS11780 PF00589 Phage integrase family CTM46_RS11790 PF00665 Integrase core domain CTM46_RS11825 PF00155 Aminotransferase class I and II CTM46_RS11975 PF00589 Phage integrase family CTM46_RS11975 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS11980 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS11980 PF00589 Phage integrase family CTM46_RS11985 PF00589 Phage integrase family CTM46_RS11985 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS12025 PF02899 Phage integrase, N-terminal SAM-like domain CTM46_RS12025 PF00589 Phage integrase family CTM46_RS12050 PF03432 Relaxase/Mobilisation nuclease domain CTM46_RS12080 PF00271 Helicase conserved C-terminal domain CTM46_RS12080 PF00176 SNF2 family N-terminal domain CTM46_RS12095 PF13173 AAA domain CTM46_RS12095 PF13635 Domain of unknown function (DUF4143) CTM46_RS12100 PF12950 TaqI-like C-terminal specificity domain CTM46_RS12100 PF07669 Eco57I restriction-modification methylase CTM46_RS12105 PF02796 Helix-turn-helix domain of resolvase CTM46_RS12105 PF00239 Resolvase, N terminal domain CTM46_RS12145 PF00398 Ribosomal RNA adenine dimethylase