Pro_0001 SM00480 DNA polymerase III beta subunit Pro_0005 SM00434 DNA Topoisomerase IV Pro_0006 SM00028 Tetratricopeptide repeats Pro_0010 SM00382 ATPases associated with a variety of cellular activities Pro_0010 SM00962 SRP54-type protein, GTPase domain Pro_0010 SM00963 SRP54-type protein, helical bundle domain Pro_0011 SM00331 Sigma factor PP2C-like phosphatases Pro_0013 SM00360 RNA recognition motif Pro_0017 SM00271 DnaJ molecular chaperone homology domain Pro_0023 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Pro_0026 SM00841 Elongation factor P, C-terminal Pro_0026 SM01185 Pro_0026 Pro_0032 SM00507 HNH nucleases Pro_0044 SM00903 Flavin reductase like domain Pro_0045 SM00849 Metallo-beta-lactamase superfamily Pro_0045 SM00903 Flavin reductase like domain Pro_0047 SM00487 DEAD-like helicases superfamily Pro_0047 SM00490 helicase superfamily c-terminal domain Pro_0048 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Pro_0050 SM00562 Pro_0050 Pro_0052 SM00845 GatB domain Pro_0056 SM00382 ATPases associated with a variety of cellular activities Pro_0065 SM00981 Pro_0065 Pro_0071 SM00968 SMC proteins Flexible Hinge Domain Pro_0074 SM00878 Biotin carboxylase C-terminal domain Pro_0079 SM00382 ATPases associated with a variety of cellular activities Pro_0085 SM00382 ATPases associated with a variety of cellular activities Pro_0091 SM00382 ATPases associated with a variety of cellular activities Pro_0105 SM00382 ATPases associated with a variety of cellular activities Pro_0106 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Pro_0120 SM00756 Pro_0120 Pro_0121 SM00729 Elongator protein 3, MiaB family, Radical SAM Pro_0142 SM00271 DnaJ molecular chaperone homology domain Pro_0145 SM00382 ATPases associated with a variety of cellular activities Pro_0150 SM00448 cheY-homologous receiver domain Pro_0150 SM00862 Transcriptional regulatory protein, C terminal Pro_0154 SM00028 Tetratricopeptide repeats Pro_0155 SM00382 ATPases associated with a variety of cellular activities Pro_0156 SM00448 cheY-homologous receiver domain Pro_0156 SM00862 Transcriptional regulatory protein, C terminal Pro_0159 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Pro_0160 SM00563 Phosphate acyltransferases Pro_0165 SM00360 RNA recognition motif Pro_0177 SM00421 helix_turn_helix, Lux Regulon Pro_0179 SM01118 Pro_0179 Pro_0187 SM00450 Rhodanese Homology Domain Pro_0191 SM01001 AIR carboxylase Pro_0194 SM00421 helix_turn_helix, Lux Regulon Pro_0194 SM00448 cheY-homologous receiver domain Pro_0200 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Pro_0205 SM00937 Pro_0205 Pro_0212 SM00836 DALR anticodon binding domain Pro_0212 SM01016 Arginyl tRNA synthetase N terminal dom Pro_0217 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Pro_0217 SM00954 Region found in RelA / SpoT proteins Pro_0218 SM00382 ATPases associated with a variety of cellular activities Pro_0219 SM00363 S4 RNA-binding domain Pro_0230 SM00649 Ribosomal protein L11/L12 Pro_0231 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Pro_0231 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Pro_0233 SM00382 ATPases associated with a variety of cellular activities Pro_0233 SM01086 C-terminal, D2-small domain, of ClpB protein Pro_0235 SM01192 Pro_0235 Pro_0235 SM01193 Pro_0235 Pro_0243 SM01004 Delta-aminolevulinic acid dehydratase Pro_0245 SM00382 ATPases associated with a variety of cellular activities Pro_0245 SM00463 Small MutS-related domain Pro_0245 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Pro_0245 SM00534 ATPase domain of DNA mismatch repair MUTS family Pro_0248 SM01093 Pro_0248 Pro_0255 SM00382 ATPases associated with a variety of cellular activities Pro_0277 SM00100 Cyclic nucleotide-monophosphate binding domain Pro_0277 SM00419 helix_turn_helix, cAMP Regulatory protein Pro_0279 SM00732 Likely ribonuclease with RNase H fold. Pro_0289 SM00852 Probable molybdopterin binding domain Pro_0298 SM00798 AICARFT/IMPCHase bienzyme Pro_0298 SM00851 MGS-like domain Pro_0301 SM00387 Histidine kinase-like ATPases Pro_0301 SM00388 His Kinase A (phosphoacceptor) domain Pro_0306 SM01091 Transporter associated domain Pro_0319 SM00327 von Willebrand factor (vWF) type A domain Pro_0319 SM00382 ATPases associated with a variety of cellular activities Pro_0321 SM00382 ATPases associated with a variety of cellular activities Pro_0340 SM00567 E-Z type HEAT repeats Pro_0351 SM00316 Ribosomal protein S1-like RNA-binding domain Pro_0365 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Pro_0366 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Pro_0366 SM00245 tail specific protease Pro_0370 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Pro_0370 SM01232 Pro_0370 Pro_0373 SM00257 Lysin motif Pro_0388 SM00382 ATPases associated with a variety of cellular activities Pro_0396 SM01133 Pro_0396 Pro_0409 SM00363 S4 RNA-binding domain Pro_0409 SM01390 Pro_0409 Pro_0410 SM01234 Pro_0410 Pro_0419 SM00838 Elongation factor G C-terminus Pro_0430 SM00382 ATPases associated with a variety of cellular activities Pro_0432 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Pro_0432 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Pro_0432 SM00493 Pro_0432 Pro_0445 SM00382 ATPases associated with a variety of cellular activities Pro_0452 SM00822 Pro_0452 Pro_0465 SM00072 Guanylate kinase homologues. Pro_0481 SM00244 prohibitin homologues Pro_0489 SM00833 Cobalamin synthesis protein cobW C-terminal domain Pro_0497 SM00487 DEAD-like helicases superfamily Pro_0497 SM00490 helicase superfamily c-terminal domain Pro_0506 SM00788 Adenylosuccinate synthetase Pro_0515 SM00855 Phosphoglycerate mutase family Pro_0530 SM00316 Ribosomal protein S1-like RNA-binding domain Pro_0548 SM00877 Pro_0548 Pro_0550 SM00877 Pro_0550 Pro_0552 SM00961 Ribulose bisphosphate carboxylase, small chain Pro_0557 SM00877 Pro_0557 Pro_0561 SM00849 Metallo-beta-lactamase superfamily Pro_0563 SM00382 ATPases associated with a variety of cellular activities Pro_0567 SM00382 ATPases associated with a variety of cellular activities Pro_0567 SM00760 Bacterial dnaA protein helix-turn-helix domain Pro_0596 SM00382 ATPases associated with a variety of cellular activities Pro_0628 SM00974 Pro_0628 Pro_0629 SM00487 DEAD-like helicases superfamily Pro_0673 SM00382 ATPases associated with a variety of cellular activities Pro_0676 SM00062 Bacterial periplasmic substrate-binding proteins Pro_0696 SM00974 Pro_0696 Pro_0728 SM00642 Alpha-amylase domain Pro_0732 SM00974 Pro_0732 Pro_0742 SM00382 ATPases associated with a variety of cellular activities Pro_0745 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Pro_0748 SM00967 RNA 2'-O ribose methyltransferase substrate binding Pro_0751 SM00481 DNA polymerase alpha chain like domain Pro_0753 SM01387 Pro_0753 Pro_0754 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Pro_0757 SM00400 zinc finger Pro_0757 SM00493 Pro_0757 Pro_0763 SM00650 Ribosomal RNA adenine dimethylases Pro_0766 SM00861 Transketolase, pyrimidine binding domain Pro_0772 SM00450 Rhodanese Homology Domain Pro_0777 SM00479 Pro_0777 Pro_0822 SM00382 ATPases associated with a variety of cellular activities Pro_0828 SM00487 DEAD-like helicases superfamily Pro_0828 SM00490 helicase superfamily c-terminal domain Pro_0836 SM00382 ATPases associated with a variety of cellular activities Pro_0843 SM01350 Pro_0843 Pro_0854 SM01211 Pro_0854 Pro_0862 SM01329 Pro_0862 Pro_0864 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Pro_0867 SM00732 Likely ribonuclease with RNase H fold. Pro_0880 SM00478 endonuclease III Pro_0881 SM00382 ATPases associated with a variety of cellular activities Pro_0888 SM00382 ATPases associated with a variety of cellular activities Pro_0897 SM00851 MGS-like domain Pro_0897 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Pro_0899 SM00382 ATPases associated with a variety of cellular activities Pro_0900 SM00363 S4 RNA-binding domain Pro_0921 SM00382 ATPases associated with a variety of cellular activities Pro_0928 SM00861 Transketolase, pyrimidine binding domain Pro_0939 SM00271 DnaJ molecular chaperone homology domain Pro_0944 SM00859 Semialdehyde dehydrogenase, NAD binding domain Pro_0953 SM00903 Flavin reductase like domain Pro_0954 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Pro_0954 SM00465 GIY-YIG type nucleases (URI domain) Pro_0956 SM00481 DNA polymerase alpha chain like domain Pro_0959 SM01018 B12 binding domain Pro_0963 SM00271 DnaJ molecular chaperone homology domain Pro_0966 SM00873 B3/4 domain Pro_0966 SM00874 tRNA synthetase B5 domain Pro_0966 SM00896 Ferredoxin-fold anticodon binding domain Pro_0969 SM00955 Pro_0969 Pro_0980 SM00382 ATPases associated with a variety of cellular activities Pro_0988 SM00316 Ribosomal protein S1-like RNA-binding domain Pro_0988 SM00357 Cold shock protein domain Pro_0988 SM00955 Pro_0988 Pro_1000 SM00487 DEAD-like helicases superfamily Pro_1000 SM00490 helicase superfamily c-terminal domain Pro_1000 SM00982 Pro_1000 Pro_1000 SM01058 CarD-like/TRCF domain Pro_1014 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Pro_1014 SM00245 tail specific protease Pro_1016 SM00986 Uracil DNA glycosylase superfamily Pro_1016 SM00987 UreE urease accessory protein, C-terminal domain Pro_1020 SM00382 ATPases associated with a variety of cellular activities Pro_1026 SM00382 ATPases associated with a variety of cellular activities Pro_1038 SM01230 Pro_1038 Pro_1044 SM00646 Pro_1044 Pro_1059 SM00382 ATPases associated with a variety of cellular activities Pro_1064 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Pro_1070 SM00905 Dihydroneopterin aldolase Pro_1077 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Pro_1078 SM00642 Alpha-amylase domain Pro_1082 SM00382 ATPases associated with a variety of cellular activities Pro_1082 SM01086 C-terminal, D2-small domain, of ClpB protein Pro_1083 SM00448 cheY-homologous receiver domain Pro_1083 SM00862 Transcriptional regulatory protein, C terminal Pro_1088 SM00563 Phosphate acyltransferases Pro_1094 SM00487 DEAD-like helicases superfamily Pro_1094 SM00490 helicase superfamily c-terminal domain Pro_1096 SM00382 ATPases associated with a variety of cellular activities Pro_1098 SM00493 Pro_1098 Pro_1099 SM00729 Elongator protein 3, MiaB family, Radical SAM Pro_1101 SM00450 Rhodanese Homology Domain Pro_1102 SM00729 Elongator protein 3, MiaB family, Radical SAM Pro_1102 SM00876 Biotin and Thiamin Synthesis associated domain Pro_1107 SM00382 ATPases associated with a variety of cellular activities Pro_1107 SM01086 C-terminal, D2-small domain, of ClpB protein Pro_1114 SM00363 S4 RNA-binding domain Pro_1118 SM01400 Pro_1118 Pro_1121 SM00387 Histidine kinase-like ATPases Pro_1121 SM01248 Pro_1121 Pro_1131 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Pro_1134 SM00917 LeuA allosteric (dimerisation) domain Pro_1137 SM00434 DNA Topoisomerase IV Pro_1138 SM01240 Pro_1138 Pro_1146 SM00382 ATPases associated with a variety of cellular activities Pro_1193 SM00679 Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins. Pro_1196 SM00382 ATPases associated with a variety of cellular activities Pro_1197 SM00360 RNA recognition motif Pro_1234 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Pro_1234 SM00474 3'-5' exonuclease Pro_1234 SM00475 5'-3' exonuclease Pro_1234 SM00482 DNA polymerase A domain Pro_1235 SM00840 Pro_1235 Pro_1241 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Pro_1241 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Pro_1271 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. Pro_1281 SM00861 Transketolase, pyrimidine binding domain Pro_1303 SM00382 ATPases associated with a variety of cellular activities Pro_1305 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Pro_1307 SM00316 Ribosomal protein S1-like RNA-binding domain Pro_1307 SM00322 K homology RNA-binding domain Pro_1312 SM00984 UDP binding domain Pro_1332 SM00382 ATPases associated with a variety of cellular activities Pro_1338 SM00382 ATPases associated with a variety of cellular activities Pro_1347 SM00904 Riboflavin kinase Pro_1352 SM01001 AIR carboxylase Pro_1360 SM00382 ATPases associated with a variety of cellular activities Pro_1360 SM00962 SRP54-type protein, GTPase domain Pro_1360 SM00963 SRP54-type protein, helical bundle domain Pro_1373 SM00967 RNA 2'-O ribose methyltransferase substrate binding Pro_1379 SM00729 Elongator protein 3, MiaB family, Radical SAM Pro_1383 SM00864 Tubulin/FtsZ family, GTPase domain Pro_1383 SM00865 Tubulin/FtsZ family, C-terminal domain Pro_1385 SM00729 Elongator protein 3, MiaB family, Radical SAM Pro_1386 SM00670 Large family of predicted nucleotide-binding domains Pro_1401 SM00411 bacterial (prokaryotic) histone like domain Pro_1403 SM00642 Alpha-amylase domain Pro_1408 SM01207 Pro_1408 Pro_1409 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Pro_1421 SM01209 Pro_1421 Pro_1421 SM01210 Pro_1421 Pro_1422 SM00091 PAS domain Pro_1422 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Pro_1422 SM00387 Histidine kinase-like ATPases Pro_1422 SM00388 His Kinase A (phosphoacceptor) domain Pro_1424 SM01248 Pro_1424 Pro_1438 SM00363 S4 RNA-binding domain Pro_1462 SM00849 Metallo-beta-lactamase superfamily Pro_1503 SM00382 ATPases associated with a variety of cellular activities Pro_1506 SM00833 Cobalamin synthesis protein cobW C-terminal domain Pro_1507 SM00320 WD40 repeats Pro_1508 SM00833 Cobalamin synthesis protein cobW C-terminal domain Pro_1542 SM00421 helix_turn_helix, Lux Regulon Pro_1542 SM00448 cheY-homologous receiver domain Pro_1543 SM00387 Histidine kinase-like ATPases Pro_1574 SM00419 helix_turn_helix, cAMP Regulatory protein Pro_1577 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Pro_1578 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Pro_1590 SM00883 Chaperonin 10 Kd subunit Pro_1591 SM00382 ATPases associated with a variety of cellular activities Pro_1595 SM01011 Aminopeptidase P, N-terminal domain Pro_1600 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Pro_1600 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Pro_1616 SM00938 Nitrogen regulatory protein P-II Pro_1617 SM00363 S4 RNA-binding domain Pro_1619 SM00998 Adenylosuccinate lyase C-terminus Pro_1621 SM00487 DEAD-like helicases superfamily Pro_1621 SM00490 helicase superfamily c-terminal domain Pro_1621 SM01142 Pro_1621 Pro_1628 SM00271 DnaJ molecular chaperone homology domain Pro_1634 SM00567 E-Z type HEAT repeats Pro_1639 SM00663 RNA polymerase I subunit A N-terminus Pro_1645 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Pro_1647 SM00322 K homology RNA-binding domain Pro_1652 SM00729 Elongator protein 3, MiaB family, Radical SAM Pro_1656 SM00729 Elongator protein 3, MiaB family, Radical SAM Pro_1657 SM00316 Ribosomal protein S1-like RNA-binding domain Pro_1662 SM00464 Found in ATP-dependent protease La (LON) Pro_1663 SM01403 Pro_1663 Pro_1665 SM00838 Elongation factor G C-terminus Pro_1665 SM00889 Elongation factor G, domain IV Pro_1670 SM00729 Elongator protein 3, MiaB family, Radical SAM Pro_1681 SM01005 Alanine racemase, C-terminal domain Pro_1682 SM00507 HNH nucleases Pro_1683 SM00937 Pro_1683 Pro_1689 SM00662 RNA polymerases D Pro_1701 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Pro_1702 SM01374 Pro_1702 Pro_1706 SM00322 K homology RNA-binding domain Pro_1709 SM01382 Pro_1709 Pro_1709 SM01383 Pro_1709 Pro_1716 SM00382 ATPases associated with a variety of cellular activities Pro_1724 SM00450 Rhodanese Homology Domain Pro_1740 SM00474 3'-5' exonuclease Pro_1747 SM00226 Low molecular weight phosphatase family Pro_1752 SM01329 Pro_1752 Pro_1762 SM00358 Double-stranded RNA binding motif Pro_1762 SM00535 Ribonuclease III family Pro_1768 SM00823 Phosphopantetheine attachment site Pro_1769 SM00825 Beta-ketoacyl synthase Pro_1770 SM00861 Transketolase, pyrimidine binding domain Pro_1774 SM00028 Tetratricopeptide repeats Pro_1775 SM00382 ATPases associated with a variety of cellular activities Pro_1780 SM00448 cheY-homologous receiver domain Pro_1780 SM00862 Transcriptional regulatory protein, C terminal Pro_1786 SM00996 S-adenosyl-L-homocysteine hydrolase Pro_1786 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Pro_1789 SM00478 endonuclease III Pro_1792 SM00116 Domain in cystathionine beta-synthase and other proteins. Pro_1792 SM00924 MgtE intracellular N domain Pro_1796 SM00387 Histidine kinase-like ATPases Pro_1796 SM00433 TopoisomeraseII Pro_1799 SM00345 helix_turn_helix gluconate operon transcriptional repressor Pro_1801 SM00957 SecA DEAD-like domain Pro_1801 SM00958 SecA preprotein cross-linking domain Pro_1805 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Pro_1805 SM00534 ATPase domain of DNA mismatch repair MUTS family Pro_1809 SM00487 DEAD-like helicases superfamily Pro_1809 SM00490 helicase superfamily c-terminal domain Pro_1812 SM00849 Metallo-beta-lactamase superfamily Pro_1813 SM01130 Pro_1813 Pro_1814 SM00859 Semialdehyde dehydrogenase, NAD binding domain Pro_1817 SM00382 ATPases associated with a variety of cellular activities Pro_1817 SM00994 ClpX C4-type zinc finger Pro_1817 SM01086 C-terminal, D2-small domain, of ClpB protein Pro_1818 SM00382 ATPases associated with a variety of cellular activities Pro_1823 SM00028 Tetratricopeptide repeats Pro_1836 SM01228 Pro_1836 Pro_1839 SM00731 SprT homologues. Pro_1841 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Pro_1841 SM00292 breast cancer carboxy-terminal domain Pro_1841 SM00532 Ligase N family Pro_1868 SM00729 Elongator protein 3, MiaB family, Radical SAM