PAGK_RS00005	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
PAGK_RS00010	SM00480	DNA polymerase III beta subunit
PAGK_RS00045	SM00387	Histidine kinase-like ATPases
PAGK_RS00045	SM00433	TopoisomeraseII
PAGK_RS00050	SM00434	DNA Topoisomerase IV
PAGK_RS00065	SM00354	helix_turn _helix lactose operon repressor
PAGK_RS00070	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS00150	SM00420	helix_turn_helix, Deoxyribose operon repressor
PAGK_RS00150	SM01134	PAGK_RS00150
PAGK_RS00220	SM00257	Lysin motif
PAGK_RS00220	SM01043	Bacterial transcriptional activator domain
PAGK_RS00255	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS00260	SM00421	helix_turn_helix, Lux Regulon
PAGK_RS00260	SM00448	cheY-homologous receiver domain
PAGK_RS00285	SM00420	helix_turn_helix, Deoxyribose operon repressor
PAGK_RS00285	SM01134	PAGK_RS00285
PAGK_RS00295	SM00872	Alpha mannosidase, middle domain
PAGK_RS00310	SM01149	PAGK_RS00310
PAGK_RS00325	SM00387	Histidine kinase-like ATPases
PAGK_RS00360	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS00440	SM00354	helix_turn _helix lactose operon repressor
PAGK_RS00495	SM01060	PAGK_RS00495
PAGK_RS00500	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS00510	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS00515	SM00327	von Willebrand factor (vWF) type A domain
PAGK_RS00530	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS00605	SM00387	Histidine kinase-like ATPases
PAGK_RS00605	SM00388	His Kinase A (phosphoacceptor) domain
PAGK_RS00610	SM00448	cheY-homologous receiver domain
PAGK_RS00610	SM00862	Transcriptional regulatory protein, C terminal
PAGK_RS00625	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS00635	SM00857	Resolvase, N terminal domain
PAGK_RS00640	SM00857	Resolvase, N terminal domain
PAGK_RS00655	SM01095	Cpl-7 lysozyme C-terminal domain
PAGK_RS00775	SM00420	helix_turn_helix, Deoxyribose operon repressor
PAGK_RS00775	SM01134	PAGK_RS00775
PAGK_RS00780	SM00984	UDP binding domain
PAGK_RS00830	SM00487	DEAD-like helicases superfamily
PAGK_RS00830	SM00490	helicase superfamily c-terminal domain
PAGK_RS00830	SM00847	Helicase associated domain (HA2)  Add an annotation
PAGK_RS00920	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS00975	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01000	SM00890	Domain of unknown function
PAGK_RS01015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PAGK_RS01015	SM00895	PAGK_RS01015
PAGK_RS01040	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01055	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01060	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01080	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01085	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01090	SM00530	Helix-turn-helix XRE-family like proteins 
PAGK_RS01115	SM00220	Serine/Threonine protein kinases, catalytic domain
PAGK_RS01115	SM00740	PAGK_RS01115
PAGK_RS01130	SM00331	Sigma factor PP2C-like phosphatases
PAGK_RS01130	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
PAGK_RS01135	SM00240	Forkhead associated domain
PAGK_RS01140	SM00240	Forkhead associated domain
PAGK_RS01220	SM00363	S4 RNA-binding domain
PAGK_RS01230	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01240	SM00493	PAGK_RS01240
PAGK_RS01250	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01330	SM00100	Cyclic nucleotide-monophosphate binding domain
PAGK_RS01330	SM00419	helix_turn_helix, cAMP Regulatory protein
PAGK_RS01335	SM00478	endonuclease III
PAGK_RS01335	SM00525	PAGK_RS01335
PAGK_RS01410	SM00487	DEAD-like helicases superfamily
PAGK_RS01410	SM00490	helicase superfamily c-terminal domain
PAGK_RS01425	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
PAGK_RS01425	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
PAGK_RS01425	SM00493	PAGK_RS01425
PAGK_RS01485	SM00855	Phosphoglycerate mutase family
PAGK_RS01520	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01570	SM00905	Dihydroneopterin aldolase
PAGK_RS01600	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01600	SM01086	C-terminal, D2-small domain, of ClpB protein
PAGK_RS01625	SM00796	Allophanate hydrolase subunit 1
PAGK_RS01630	SM00797	Allophanate hydrolase subunit 2
PAGK_RS01655	SM00421	helix_turn_helix, Lux Regulon
PAGK_RS01655	SM00448	cheY-homologous receiver domain
PAGK_RS01670	SM01061	CAT RNA binding domain
PAGK_RS01695	SM00478	endonuclease III
PAGK_RS01695	SM00525	PAGK_RS01695
PAGK_RS01705	SM01004	Delta-aminolevulinic acid dehydratase
PAGK_RS01750	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01755	SM00919	Malic enzyme, NAD binding domain
PAGK_RS01755	SM01274	PAGK_RS01755
PAGK_RS01780	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PAGK_RS01790	SM01155	PAGK_RS01790
PAGK_RS01805	SM00855	Phosphoglycerate mutase family
PAGK_RS01830	SM00909	Sporulation and spore germination
PAGK_RS01835	SM00822	PAGK_RS01835
PAGK_RS01860	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01875	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS01895	SM00855	Phosphoglycerate mutase family
PAGK_RS01905	SM00862	Transcriptional regulatory protein, C terminal
PAGK_RS01970	SM01058	CarD-like/TRCF domain
PAGK_RS01980	SM00448	cheY-homologous receiver domain
PAGK_RS01980	SM00862	Transcriptional regulatory protein, C terminal
PAGK_RS01985	SM00387	Histidine kinase-like ATPases
PAGK_RS01985	SM00388	His Kinase A (phosphoacceptor) domain
PAGK_RS02005	SM00855	Phosphoglycerate mutase family
PAGK_RS02020	SM00870	PAGK_RS02020
PAGK_RS02070	SM00967	RNA 2'-O ribose methyltransferase substrate binding
PAGK_RS02075	SM00840	PAGK_RS02075
PAGK_RS02130	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS02165	SM00829	Enoylreductase
PAGK_RS02190	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS02205	SM00506	Appr-1"-p processing enzyme
PAGK_RS02210	SM00829	Enoylreductase
PAGK_RS02215	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS02235	SM00421	helix_turn_helix, Lux Regulon
PAGK_RS02235	SM00448	cheY-homologous receiver domain
PAGK_RS02240	SM00855	Phosphoglycerate mutase family
PAGK_RS02290	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS02325	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS02430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PAGK_RS02430	SM00866	PAGK_RS02430
PAGK_RS02465	SM00354	helix_turn _helix lactose operon repressor
PAGK_RS02530	SM00487	DEAD-like helicases superfamily
PAGK_RS02530	SM00490	helicase superfamily c-terminal domain
PAGK_RS02550	SM00357	Cold shock protein domain
PAGK_RS02590	SM00529	Helix-turn-helix diphteria tox regulatory element
PAGK_RS02630	SM00858	PAGK_RS02630
PAGK_RS02635	SM00834	Putative regulatory protein
PAGK_RS02675	SM00852	Probable molybdopterin binding domain
PAGK_RS02690	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAGK_RS02705	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS02730	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PAGK_RS02745	SM00852	Probable molybdopterin binding domain
PAGK_RS02815	SM00650	Ribosomal RNA adenine dimethylases
PAGK_RS02825	SM00347	helix_turn_helix multiple antibiotic resistance protein
PAGK_RS02845	SM01400	PAGK_RS02845
PAGK_RS02890	SM00829	Enoylreductase
PAGK_RS02900	SM00487	DEAD-like helicases superfamily
PAGK_RS02900	SM00490	helicase superfamily c-terminal domain
PAGK_RS02900	SM00982	PAGK_RS02900
PAGK_RS02900	SM01058	CarD-like/TRCF domain
PAGK_RS02920	SM01192	PAGK_RS02920
PAGK_RS02920	SM01193	PAGK_RS02920
PAGK_RS02990	SM00220	Serine/Threonine protein kinases, catalytic domain
PAGK_RS03005	SM00479	PAGK_RS03005
PAGK_RS03040	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03060	SM00347	helix_turn_helix multiple antibiotic resistance protein
PAGK_RS03080	SM00642	Alpha-amylase domain
PAGK_RS03085	SM01350	PAGK_RS03085
PAGK_RS03105	SM00292	breast cancer carboxy-terminal domain
PAGK_RS03105	SM00532	Ligase N family
PAGK_RS03125	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
PAGK_RS03125	SM01232	PAGK_RS03125
PAGK_RS03170	SM00487	DEAD-like helicases superfamily
PAGK_RS03170	SM00490	helicase superfamily c-terminal domain
PAGK_RS03180	SM00490	helicase superfamily c-terminal domain
PAGK_RS03185	SM00487	DEAD-like helicases superfamily
PAGK_RS03230	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03230	SM00994	ClpX C4-type zinc finger
PAGK_RS03230	SM01086	C-terminal, D2-small domain, of ClpB protein
PAGK_RS03235	SM00245	tail specific protease
PAGK_RS03300	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03310	SM00354	helix_turn _helix lactose operon repressor
PAGK_RS03330	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PAGK_RS03350	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03385	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03410	SM00822	PAGK_RS03410
PAGK_RS03425	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03435	SM00244	prohibitin homologues
PAGK_RS03510	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PAGK_RS03530	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PAGK_RS03560	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03605	SM00316	Ribosomal protein S1-like RNA-binding domain
PAGK_RS03615	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03685	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03700	SM00904	Riboflavin kinase
PAGK_RS03705	SM01387	PAGK_RS03705
PAGK_RS03710	SM00316	Ribosomal protein S1-like RNA-binding domain
PAGK_RS03710	SM00322	K homology RNA-binding domain
PAGK_RS03730	SM00849	Metallo-beta-lactamase superfamily
PAGK_RS03740	SM00487	DEAD-like helicases superfamily
PAGK_RS03740	SM00490	helicase superfamily c-terminal domain
PAGK_RS03770	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03775	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03810	SM00872	Alpha mannosidase, middle domain
PAGK_RS03815	SM00354	helix_turn _helix lactose operon repressor
PAGK_RS03845	SM00358	Double-stranded RNA binding motif
PAGK_RS03845	SM00535	Ribonuclease III family
PAGK_RS03850	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
PAGK_RS03850	SM01232	PAGK_RS03850
PAGK_RS03880	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03880	SM00962	SRP54-type protein, GTPase domain
PAGK_RS03880	SM00963	SRP54-type protein, helical bundle domain
PAGK_RS03890	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS03890	SM00962	SRP54-type protein, GTPase domain
PAGK_RS03890	SM00963	SRP54-type protein, helical bundle domain
PAGK_RS03965	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS04065	SM00967	RNA 2'-O ribose methyltransferase substrate binding
PAGK_RS04075	SM00873	B3/4 domain
PAGK_RS04075	SM00874	tRNA synthetase B5 domain
PAGK_RS04075	SM00896	Ferredoxin-fold anticodon binding domain
PAGK_RS04080	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAGK_RS04080	SM00876	Biotin and Thiamin Synthesis associated domain
PAGK_RS04130	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS04195	SM00363	S4 RNA-binding domain
PAGK_RS04235	SM00487	DEAD-like helicases superfamily
PAGK_RS04235	SM00490	helicase superfamily c-terminal domain
PAGK_RS04235	SM01142	PAGK_RS04235
PAGK_RS04270	SM01329	PAGK_RS04270
PAGK_RS04285	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
PAGK_RS04310	SM00346	helix_turn_helix isocitrate lyase regulation
PAGK_RS04330	SM00563	Phosphate acyltransferases
PAGK_RS04355	SM00843	PAGK_RS04355
PAGK_RS04370	SM00937	PAGK_RS04370
PAGK_RS04375	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS04390	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PAGK_RS04465	SM00448	cheY-homologous receiver domain
PAGK_RS04465	SM00862	Transcriptional regulatory protein, C terminal
PAGK_RS04470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PAGK_RS04470	SM00387	Histidine kinase-like ATPases
PAGK_RS04470	SM00388	His Kinase A (phosphoacceptor) domain
PAGK_RS04475	SM00909	Sporulation and spore germination
PAGK_RS04490	SM00957	SecA DEAD-like domain
PAGK_RS04490	SM00958	SecA preprotein cross-linking domain
PAGK_RS04525	SM00487	DEAD-like helicases superfamily
PAGK_RS04525	SM00490	helicase superfamily c-terminal domain
PAGK_RS04540	SM00331	Sigma factor PP2C-like phosphatases
PAGK_RS04540	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
PAGK_RS04560	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS04575	SM00341	Helicase and RNase D C-terminal
PAGK_RS04650	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS04655	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS04700	SM00387	Histidine kinase-like ATPases
PAGK_RS04720	SM00861	Transketolase, pyrimidine binding domain
PAGK_RS04755	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS04765	SM00937	PAGK_RS04765
PAGK_RS04825	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS04845	SM00986	Uracil DNA glycosylase superfamily
PAGK_RS04845	SM00987	UreE urease accessory protein, C-terminal domain 
PAGK_RS04855	SM00347	helix_turn_helix multiple antibiotic resistance protein
PAGK_RS04880	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PAGK_RS04895	SM00530	Helix-turn-helix XRE-family like proteins 
PAGK_RS04925	SM00344	helix_turn_helix ASNC type
PAGK_RS04955	SM01133	PAGK_RS04955
PAGK_RS04980	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS05015	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS05080	SM01409	PAGK_RS05080
PAGK_RS05085	SM00072	Guanylate kinase homologues.
PAGK_RS05100	SM00841	Elongation factor P, C-terminal
PAGK_RS05100	SM01185	PAGK_RS05100
PAGK_RS05115	SM00854	Bacterial capsule synthesis protein PGA_cap
PAGK_RS05145	SM00732	Likely ribonuclease with RNase H fold.
PAGK_RS05150	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PAGK_RS05160	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS05200	SM00849	Metallo-beta-lactamase superfamily
PAGK_RS05210	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAGK_RS05210	SM00954	Region found in RelA / SpoT proteins
PAGK_RS05235	SM01323	PAGK_RS05235
PAGK_RS05240	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS05245	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PAGK_RS05290	SM00481	DNA polymerase alpha chain like domain
PAGK_RS05420	SM00845	GatB domain
PAGK_RS05465	SM00642	Alpha-amylase domain
PAGK_RS05475	SM00642	Alpha-amylase domain
PAGK_RS05485	SM00642	Alpha-amylase domain
PAGK_RS05565	SM00046	Diacylglycerol kinase catalytic domain (presumed)
PAGK_RS05595	SM00422	helix_turn_helix, mercury resistance
PAGK_RS05605	SM00422	helix_turn_helix, mercury resistance
PAGK_RS05610	SM00240	Forkhead associated domain
PAGK_RS05650	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PAGK_RS05655	SM00421	helix_turn_helix, Lux Regulon
PAGK_RS05655	SM00448	cheY-homologous receiver domain
PAGK_RS05660	SM00387	Histidine kinase-like ATPases
PAGK_RS05665	SM00829	Enoylreductase
PAGK_RS05725	SM00474	3'-5' exonuclease
PAGK_RS05730	SM00861	Transketolase, pyrimidine binding domain
PAGK_RS05820	SM00434	DNA Topoisomerase IV
PAGK_RS05835	SM00387	Histidine kinase-like ATPases
PAGK_RS05835	SM00433	TopoisomeraseII
PAGK_RS05900	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS05900	SM00487	DEAD-like helicases superfamily
PAGK_RS05900	SM00490	helicase superfamily c-terminal domain
PAGK_RS05900	SM00847	Helicase associated domain (HA2)  Add an annotation
PAGK_RS05935	SM00487	DEAD-like helicases superfamily
PAGK_RS05935	SM00491	PAGK_RS05935
PAGK_RS05960	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAGK_RS05975	SM00322	K homology RNA-binding domain
PAGK_RS05975	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAGK_RS05985	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS05995	SM00420	helix_turn_helix, Deoxyribose operon repressor
PAGK_RS05995	SM01134	PAGK_RS05995
PAGK_RS06000	SM00530	Helix-turn-helix XRE-family like proteins 
PAGK_RS06015	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAGK_RS06030	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
PAGK_RS06045	SM00851	MGS-like domain
PAGK_RS06045	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PAGK_RS06045	SM01209	PAGK_RS06045
PAGK_RS06050	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
PAGK_RS06115	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
PAGK_RS06130	SM00825	Beta-ketoacyl synthase
PAGK_RS06145	SM00327	von Willebrand factor (vWF) type A domain
PAGK_RS06150	SM00327	von Willebrand factor (vWF) type A domain
PAGK_RS06255	SM00400	zinc finger
PAGK_RS06255	SM00493	PAGK_RS06255
PAGK_RS06255	SM00766	DNA primase DnaG DnaB-binding
PAGK_RS06265	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAGK_RS06305	SM00421	helix_turn_helix, Lux Regulon
PAGK_RS06305	SM00448	cheY-homologous receiver domain
PAGK_RS06335	SM00917	LeuA allosteric (dimerisation) domain
PAGK_RS06350	SM00116	Domain in cystathionine beta-synthase and other proteins.
PAGK_RS06350	SM01091	Transporter associated domain
PAGK_RS06390	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS06395	SM00421	helix_turn_helix, Lux Regulon
PAGK_RS06395	SM00448	cheY-homologous receiver domain
PAGK_RS06420	SM00487	DEAD-like helicases superfamily
PAGK_RS06420	SM00490	helicase superfamily c-terminal domain
PAGK_RS06440	SM00829	Enoylreductase
PAGK_RS06450	SM00271	DnaJ molecular chaperone homology domain
PAGK_RS06460	SM00849	Metallo-beta-lactamase superfamily
PAGK_RS06475	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAGK_RS06525	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PAGK_RS06530	SM00838	Elongation factor G C-terminus
PAGK_RS06535	SM00642	Alpha-amylase domain
PAGK_RS06550	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS06550	SM00487	DEAD-like helicases superfamily
PAGK_RS06560	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PAGK_RS06590	SM00919	Malic enzyme, NAD binding domain
PAGK_RS06590	SM01274	PAGK_RS06590
PAGK_RS06620	SM01007	Class II Aldolase and Adducin N-terminal domain
PAGK_RS06630	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
PAGK_RS06645	SM00347	helix_turn_helix multiple antibiotic resistance protein
PAGK_RS06650	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS06695	SM00421	helix_turn_helix, Lux Regulon
PAGK_RS06695	SM00448	cheY-homologous receiver domain
PAGK_RS06700	SM00387	Histidine kinase-like ATPases
PAGK_RS06705	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS06740	SM00903	Flavin reductase like domain
PAGK_RS06785	SM00855	Phosphoglycerate mutase family
PAGK_RS06810	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
PAGK_RS06845	SM00316	Ribosomal protein S1-like RNA-binding domain
PAGK_RS06855	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAGK_RS06860	SM00562	PAGK_RS06860
PAGK_RS06895	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PAGK_RS06915	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PAGK_RS06915	SM00465	GIY-YIG type nucleases (URI domain)
PAGK_RS06925	SM00855	Phosphoglycerate mutase family
PAGK_RS06945	SM00849	Metallo-beta-lactamase superfamily
PAGK_RS06955	SM00487	DEAD-like helicases superfamily
PAGK_RS06955	SM00490	helicase superfamily c-terminal domain
PAGK_RS06995	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS07010	SM00327	von Willebrand factor (vWF) type A domain
PAGK_RS07015	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS07030	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS07035	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS07045	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS07065	SM00316	Ribosomal protein S1-like RNA-binding domain
PAGK_RS07085	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
PAGK_RS07085	SM00474	3'-5' exonuclease
PAGK_RS07085	SM00475	5'-3' exonuclease
PAGK_RS07085	SM00482	DNA polymerase A domain
PAGK_RS07095	SM00448	cheY-homologous receiver domain
PAGK_RS07095	SM01012	PAGK_RS07095
PAGK_RS07155	SM00864	Tubulin/FtsZ family, GTPase domain
PAGK_RS07155	SM00865	Tubulin/FtsZ family, C-terminal domain
PAGK_RS07230	SM00460	Transglutaminase/protease-like homologues
PAGK_RS07255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PAGK_RS07255	SM00895	PAGK_RS07255
PAGK_RS07310	SM00220	Serine/Threonine protein kinases, catalytic domain
PAGK_RS07320	SM00849	Metallo-beta-lactamase superfamily
PAGK_RS07335	SM00563	Phosphate acyltransferases
PAGK_RS07355	SM00465	GIY-YIG type nucleases (URI domain)
PAGK_RS07355	SM00479	PAGK_RS07355
PAGK_RS07420	SM01240	PAGK_RS07420
PAGK_RS07440	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS07520	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAGK_RS07560	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS07590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PAGK_RS07590	SM00866	PAGK_RS07590
PAGK_RS07615	SM01230	PAGK_RS07615
PAGK_RS07650	SM01230	PAGK_RS07650
PAGK_RS07685	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS07715	SM01011	Aminopeptidase P, N-terminal domain
PAGK_RS07730	SM00924	MgtE intracellular N domain
PAGK_RS07755	SM01130	PAGK_RS07755
PAGK_RS07835	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
PAGK_RS07835	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
PAGK_RS07850	SM01120	PAGK_RS07850
PAGK_RS07895	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS07920	SM00812	Alpha-L-fucosidase
PAGK_RS07960	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS08000	SM00984	UDP binding domain
PAGK_RS08005	SM00642	Alpha-amylase domain
PAGK_RS08070	SM00347	helix_turn_helix multiple antibiotic resistance protein
PAGK_RS08130	SM00670	Large family of predicted nucleotide-binding domains
PAGK_RS08175	SM00986	Uracil DNA glycosylase superfamily
PAGK_RS08175	SM00987	UreE urease accessory protein, C-terminal domain 
PAGK_RS08300	SM00641	Glycosyl hydrolases family 25
PAGK_RS08385	SM00899	PAGK_RS08385
PAGK_RS08415	SM00411	bacterial (prokaryotic) histone like domain
PAGK_RS08510	SM01038	Beta galactosidase small chain
PAGK_RS08515	SM01001	AIR carboxylase
PAGK_RS08570	SM00822	PAGK_RS08570
PAGK_RS08600	SM00878	Biotin carboxylase C-terminal domain
PAGK_RS08640	SM00479	PAGK_RS08640
PAGK_RS08670	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS08685	SM00116	Domain in cystathionine beta-synthase and other proteins.
PAGK_RS08685	SM01091	Transporter associated domain
PAGK_RS08740	SM00798	AICARFT/IMPCHase bienzyme
PAGK_RS08740	SM00851	MGS-like domain
PAGK_RS08775	SM00881	CoA binding domain
PAGK_RS08795	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS08805	SM00155	Phospholipase D. Active site motifs.
PAGK_RS08835	SM00830	Chorismate mutase type II
PAGK_RS08840	SM01240	PAGK_RS08840
PAGK_RS08845	SM00116	Domain in cystathionine beta-synthase and other proteins.
PAGK_RS08845	SM01240	PAGK_RS08845
PAGK_RS08870	SM00883	Chaperonin 10 Kd subunit
PAGK_RS08895	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS08940	SM00487	DEAD-like helicases superfamily
PAGK_RS08940	SM00490	helicase superfamily c-terminal domain
PAGK_RS08960	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS09060	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS09070	SM00822	PAGK_RS09070
PAGK_RS09080	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS09115	SM00662	RNA polymerases D
PAGK_RS09120	SM00363	S4 RNA-binding domain
PAGK_RS09120	SM01390	PAGK_RS09120
PAGK_RS09140	SM00316	Ribosomal protein S1-like RNA-binding domain
PAGK_RS09225	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PAGK_RS09230	SM01374	PAGK_RS09230
PAGK_RS09250	SM00322	K homology RNA-binding domain
PAGK_RS09265	SM01382	PAGK_RS09265
PAGK_RS09265	SM01383	PAGK_RS09265
PAGK_RS09285	SM01403	PAGK_RS09285
PAGK_RS09345	SM00838	Elongation factor G C-terminus
PAGK_RS09345	SM00889	Elongation factor G, domain IV
PAGK_RS09375	SM00663	RNA polymerase I subunit A N-terminus
PAGK_RS09400	SM00649	Ribosomal protein L11/L12
PAGK_RS09405	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
PAGK_RS09405	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PAGK_RS09535	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS09550	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS09620	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
PAGK_RS09625	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PAGK_RS09675	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS09695	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS09705	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS09725	SM01120	PAGK_RS09725
PAGK_RS09765	SM00710	Parallel beta-helix repeats
PAGK_RS09800	SM00287	Bacterial SH3 domain homologues
PAGK_RS09865	SM00244	prohibitin homologues
PAGK_RS09935	SM01211	PAGK_RS09935
PAGK_RS09960	SM00998	Adenylosuccinate lyase C-terminus
PAGK_RS09965	SM01209	PAGK_RS09965
PAGK_RS09965	SM01210	PAGK_RS09965
PAGK_RS09970	SM00788	Adenylosuccinate synthetase
PAGK_RS09980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PAGK_RS09980	SM00895	PAGK_RS09980
PAGK_RS09990	SM01130	PAGK_RS09990
PAGK_RS10095	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS10095	SM01086	C-terminal, D2-small domain, of ClpB protein
PAGK_RS10115	SM00903	Flavin reductase like domain
PAGK_RS10125	SM00387	Histidine kinase-like ATPases
PAGK_RS10130	SM00421	helix_turn_helix, Lux Regulon
PAGK_RS10130	SM00448	cheY-homologous receiver domain
PAGK_RS10135	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS10160	SM00829	Enoylreductase
PAGK_RS10170	SM00422	helix_turn_helix, mercury resistance
PAGK_RS10175	SM00271	DnaJ molecular chaperone homology domain
PAGK_RS10200	SM00448	cheY-homologous receiver domain
PAGK_RS10200	SM00862	Transcriptional regulatory protein, C terminal
PAGK_RS10210	SM01133	PAGK_RS10210
PAGK_RS10320	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS10325	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS10355	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS10370	SM00861	Transketolase, pyrimidine binding domain
PAGK_RS10385	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAGK_RS10460	SM00226	Low molecular weight phosphatase family
PAGK_RS10470	SM00448	cheY-homologous receiver domain
PAGK_RS10470	SM00862	Transcriptional regulatory protein, C terminal
PAGK_RS10475	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PAGK_RS10475	SM00387	Histidine kinase-like ATPases
PAGK_RS10475	SM00388	His Kinase A (phosphoacceptor) domain
PAGK_RS10570	SM00836	DALR anticodon binding domain
PAGK_RS10570	SM01016	Arginyl tRNA synthetase N terminal dom
PAGK_RS10605	SM00487	DEAD-like helicases superfamily
PAGK_RS10605	SM00490	helicase superfamily c-terminal domain
PAGK_RS10625	SM01110	PAGK_RS10625
PAGK_RS10720	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS10725	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS10815	SM00287	Bacterial SH3 domain homologues
PAGK_RS10920	SM00354	helix_turn _helix lactose operon repressor
PAGK_RS10960	SM00829	Enoylreductase
PAGK_RS11000	SM00382	ATPases associated with a variety of cellular activities
PAGK_RS11015	SM00530	Helix-turn-helix XRE-family like proteins 
PAGK_RS11020	SM00873	B3/4 domain
PAGK_RS11045	SM00893	Electron transfer flavoprotein domain
PAGK_RS11060	SM00346	helix_turn_helix isocitrate lyase regulation
PAGK_RS11145	SM00450	Rhodanese Homology Domain
PAGK_RS11170	SM00518	AP endonuclease family 2
PAGK_RS11180	SM00563	Phosphate acyltransferases
PAGK_RS11185	SM00871	Bacterial transcription activator, effector binding domain
PAGK_RS11190	SM01208	PAGK_RS11190
PAGK_RS11215	SM00829	Enoylreductase
PAGK_RS11250	SM00347	helix_turn_helix multiple antibiotic resistance protein
PAGK_RS11325	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
PAGK_RS11325	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
PAGK_RS11345	SM00287	Bacterial SH3 domain homologues
PAGK_RS11360	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
PAGK_RS11360	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
PAGK_RS11365	SM00344	helix_turn_helix ASNC type
PAGK_RS11415	SM01005	Alanine racemase, C-terminal domain
PAGK_RS11465	SM00354	helix_turn _helix lactose operon repressor
PAGK_RS11490	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAGK_RS11520	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PAGK_RS11575	SM00861	Transketolase, pyrimidine binding domain
PAGK_RS11610	SM01007	Class II Aldolase and Adducin N-terminal domain
PAGK_RS11615	SM00420	helix_turn_helix, Deoxyribose operon repressor
PAGK_RS11615	SM01134	PAGK_RS11615
PAGK_RS11635	SM00354	helix_turn _helix lactose operon repressor
PAGK_RS11685	SM00470	ParB-like nuclease domain
PAGK_RS11720	SM00393	Putative single-stranded nucleic acids-binding domain
PAGK_RS11760	SM00480	DNA polymerase III beta subunit
