locus-tag class description RM25_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix RM25_RS00005 PF00308 Bacterial dnaA protein RM25_RS00010 PF07690 Major Facilitator Superfamily RM25_RS00020 PF13439 Glycosyltransferase Family 4 RM25_RS00020 PF00534 Glycosyl transferases group 1 RM25_RS00030 PF12704 MacB-like periplasmic core domain RM25_RS00030 PF00005 ABC transporter RM25_RS00030 PF02687 FtsX-like permease family RM25_RS00035 PF12704 MacB-like periplasmic core domain RM25_RS00035 PF02687 FtsX-like permease family RM25_RS00040 PF00712 DNA polymerase III beta subunit, N-terminal domain RM25_RS00040 PF02767 DNA polymerase III beta subunit, central domain RM25_RS00040 PF02768 DNA polymerase III beta subunit, C-terminal domain RM25_RS00045 PF02463 RecF/RecN/SMC N terminal domain RM25_RS00050 PF05258 Dna[CI] antecedent, DciA RM25_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM25_RS00070 PF00204 DNA gyrase B RM25_RS00070 PF00986 DNA gyrase B subunit, carboxyl terminus RM25_RS00070 PF01751 Toprim domain RM25_RS00075 PF03989 DNA gyrase C-terminal domain, beta-propeller RM25_RS00075 PF00521 DNA gyrase/topoisomerase IV, subunit A RM25_RS00090 PF01875 Memo-like protein RM25_RS00105 PF12089 Transmembrane domain of unknown function (DUF3566) RM25_RS00180 PF00083 Sugar (and other) transporter RM25_RS00185 PF00072 Response regulator receiver domain RM25_RS00185 PF00196 Bacterial regulatory proteins, luxR family RM25_RS00195 PF00083 Sugar (and other) transporter RM25_RS00200 PF07687 Peptidase dimerisation domain RM25_RS00200 PF01546 Peptidase family M20/M25/M40 RM25_RS00205 PF00005 ABC transporter RM25_RS00205 PF00664 ABC transporter transmembrane region RM25_RS00210 PF00664 ABC transporter transmembrane region RM25_RS00210 PF00005 ABC transporter RM25_RS00215 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RM25_RS00215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RM25_RS00220 PF00324 Amino acid permease RM25_RS00225 PF17964 Bacterial Ig domain RM25_RS00225 PF03734 L,D-transpeptidase catalytic domain RM25_RS00230 PF00708 Acylphosphatase RM25_RS00235 PF01205 Uncharacterized protein family UPF0029 RM25_RS00235 PF09186 Domain of unknown function (DUF1949) RM25_RS00240 PF00881 Nitroreductase family RM25_RS00265 PF00483 Nucleotidyl transferase RM25_RS00270 PF00535 Glycosyl transferase family 2 RM25_RS00280 PF00535 Glycosyl transferase family 2 RM25_RS00310 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RM25_RS00315 PF16363 GDP-mannose 4,6 dehydratase RM25_RS00335 PF03275 UDP-galactopyranose mutase RM25_RS00340 PF17994 Galactofuranosyltransferase 2 N-terminal RM25_RS00345 PF01061 ABC-2 type transporter RM25_RS00350 PF00005 ABC transporter RM25_RS00360 PF00535 Glycosyl transferase family 2 RM25_RS00365 PF00795 Carbon-nitrogen hydrolase RM25_RS00365 PF00535 Glycosyl transferase family 2 RM25_RS00390 PF00871 Acetokinase family RM25_RS00395 PF07085 DRTGG domain RM25_RS00395 PF01515 Phosphate acetyl/butaryl transferase RM25_RS00420 PF01471 Putative peptidoglycan binding domain RM25_RS00420 PF08924 Domain of unknown function (DUF1906) RM25_RS00430 PF01471 Putative peptidoglycan binding domain RM25_RS00430 PF08924 Domain of unknown function (DUF1906) RM25_RS00455 PF00005 ABC transporter RM25_RS00460 PF00005 ABC transporter RM25_RS00460 PF12704 MacB-like periplasmic core domain RM25_RS00460 PF02687 FtsX-like permease family RM25_RS00465 PF00271 Helicase conserved C-terminal domain RM25_RS00465 PF00176 SNF2 family N-terminal domain RM25_RS00465 PF12419 SNF2 Helicase protein RM25_RS00485 PF01261 Xylose isomerase-like TIM barrel RM25_RS00490 PF00501 AMP-binding enzyme RM25_RS00495 PF00083 Sugar (and other) transporter RM25_RS00505 PF00356 Bacterial regulatory proteins, lacI family RM25_RS00515 PF00857 Isochorismatase family RM25_RS00525 PF00497 Bacterial extracellular solute-binding proteins, family 3 RM25_RS00530 PF00497 Bacterial extracellular solute-binding proteins, family 3 RM25_RS00535 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS00540 PF00005 ABC transporter RM25_RS00550 PF03551 Transcriptional regulator PadR-like family RM25_RS00555 PF02540 NAD synthase RM25_RS00555 PF00795 Carbon-nitrogen hydrolase RM25_RS00560 PF00155 Aminotransferase class I and II RM25_RS00565 PF02502 Ribose/Galactose Isomerase RM25_RS00570 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RM25_RS00575 PF02447 GntP family permease RM25_RS00590 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM25_RS00590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RM25_RS00595 PF01022 Bacterial regulatory protein, arsR family RM25_RS00600 PF04127 DNA / pantothenate metabolism flavoprotein RM25_RS00600 PF02441 Flavoprotein RM25_RS00605 PF00842 Alanine racemase, C-terminal domain RM25_RS00605 PF01168 Alanine racemase, N-terminal domain RM25_RS00625 PF00285 Citrate synthase, C-terminal domain RM25_RS00630 PF11574 Protein of unknown function (DUF3235) RM25_RS00630 PF06737 Transglycosylase-like domain RM25_RS00635 PF00069 Protein kinase domain RM25_RS00640 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RM25_RS00645 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RM25_RS00645 PF06827 Zinc finger found in FPG and IleRS RM25_RS00650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RM25_RS00650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RM25_RS00655 PF18766 SWI2/SNF2 ATPase RM25_RS00655 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RM25_RS00655 PF12008 Type I restriction and modification enzyme - subunit R C terminal RM25_RS00660 PF01420 Type I restriction modification DNA specificity domain RM25_RS00665 PF02384 N-6 DNA Methylase RM25_RS00665 PF12161 HsdM N-terminal domain RM25_RS00670 PF00005 ABC transporter RM25_RS00680 PF08546 Ketopantoate reductase PanE/ApbA C terminal RM25_RS00680 PF02558 Ketopantoate reductase PanE/ApbA RM25_RS00685 PF00425 chorismate binding enzyme RM25_RS00685 PF04715 Anthranilate synthase component I, N terminal region RM25_RS00685 PF00117 Glutamine amidotransferase class-I RM25_RS00705 PF00781 Diacylglycerol kinase catalytic domain RM25_RS00705 PF02142 MGS-like domain RM25_RS00710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RM25_RS00710 PF02403 Seryl-tRNA synthetase N-terminal domain RM25_RS00720 PF00367 phosphotransferase system, EIIB RM25_RS00720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RM25_RS00720 PF02378 Phosphotransferase system, EIIC RM25_RS00725 PF10996 Beta-Casp domain RM25_RS00725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RM25_RS00725 PF00753 Metallo-beta-lactamase superfamily RM25_RS00730 PF00486 Transcriptional regulatory protein, C terminal RM25_RS00730 PF00072 Response regulator receiver domain RM25_RS00735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM25_RS00735 PF00672 HAMP domain RM25_RS00735 PF00512 His Kinase A (phospho-acceptor) domain RM25_RS00745 PF08534 Redoxin RM25_RS00750 PF02146 Sir2 family RM25_RS00755 PF03816 Cell envelope-related transcriptional attenuator domain RM25_RS00755 PF13399 LytR cell envelope-related transcriptional attenuator RM25_RS00760 PF00764 Arginosuccinate synthase RM25_RS00765 PF08240 Alcohol dehydrogenase GroES-like domain RM25_RS00765 PF00107 Zinc-binding dehydrogenase RM25_RS00800 PF00106 short chain dehydrogenase RM25_RS00805 PF03009 Glycerophosphoryl diester phosphodiesterase family RM25_RS00810 PF08501 Shikimate dehydrogenase substrate binding domain RM25_RS00810 PF01488 Shikimate / quinate 5-dehydrogenase RM25_RS00810 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RM25_RS00820 PF00248 Aldo/keto reductase family RM25_RS00825 PF00005 ABC transporter RM25_RS00825 PF02687 FtsX-like permease family RM25_RS00825 PF12704 MacB-like periplasmic core domain RM25_RS00830 PF12704 MacB-like periplasmic core domain RM25_RS00830 PF02687 FtsX-like permease family RM25_RS00830 PF00005 ABC transporter RM25_RS00835 PF00196 Bacterial regulatory proteins, luxR family RM25_RS00835 PF00072 Response regulator receiver domain RM25_RS00840 PF07730 Histidine kinase RM25_RS00850 PF06736 Protein of unknown function (DUF1211) RM25_RS00865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RM25_RS00875 PF14480 DNA polymerase III polC-type N-terminus I RM25_RS00875 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RM25_RS00875 PF14579 Helix-hairpin-helix motif RM25_RS00875 PF02811 PHP domain RM25_RS00875 PF00929 Exonuclease RM25_RS00875 PF07733 Bacterial DNA polymerase III alpha NTPase domain RM25_RS00875 PF11490 DNA polymerase III polC-type N-terminus II RM25_RS00880 PF01654 Cytochrome bd terminal oxidase subunit I RM25_RS00885 PF02322 Cytochrome bd terminal oxidase subunit II RM25_RS00890 PF00005 ABC transporter RM25_RS00890 PF00664 ABC transporter transmembrane region RM25_RS00895 PF07687 Peptidase dimerisation domain RM25_RS00895 PF01546 Peptidase family M20/M25/M40 RM25_RS00900 PF07690 Major Facilitator Superfamily RM25_RS00910 PF01910 Thiamine-binding protein RM25_RS00915 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM25_RS00915 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RM25_RS00920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RM25_RS00920 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RM25_RS00920 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RM25_RS00920 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RM25_RS00920 PF10371 Domain of unknown function RM25_RS00925 PF01180 Dihydroorotate dehydrogenase RM25_RS00930 PF00171 Aldehyde dehydrogenase family RM25_RS00965 PF00664 ABC transporter transmembrane region RM25_RS00965 PF00005 ABC transporter RM25_RS00970 PF00005 ABC transporter RM25_RS00970 PF00664 ABC transporter transmembrane region RM25_RS00980 PF00809 Pterin binding enzyme RM25_RS00985 PF00324 Amino acid permease RM25_RS01000 PF00005 ABC transporter RM25_RS01005 PF01336 OB-fold nucleic acid binding domain RM25_RS01005 PF00152 tRNA synthetases class II (D, K and N) RM25_RS01010 PF03848 Tellurite resistance protein TehB RM25_RS01015 PF00676 Dehydrogenase E1 component RM25_RS01020 PF02780 Transketolase, C-terminal domain RM25_RS01020 PF02779 Transketolase, pyrimidine binding domain RM25_RS01025 PF00364 Biotin-requiring enzyme RM25_RS01025 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RM25_RS01025 PF02817 e3 binding domain RM25_RS01035 PF06781 Cell division protein CrgA RM25_RS01040 PF05949 Bacterial protein of unknown function (DUF881) RM25_RS01045 PF00117 Glutamine amidotransferase class-I RM25_RS01050 PF00248 Aldo/keto reductase family RM25_RS01065 PF13180 PDZ domain RM25_RS01070 PF13180 PDZ domain RM25_RS01085 PF02770 Acyl-CoA dehydrogenase, middle domain RM25_RS01085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RM25_RS01085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RM25_RS01095 PF13193 AMP-binding enzyme C-terminal domain RM25_RS01095 PF00501 AMP-binding enzyme RM25_RS01100 PF01575 MaoC like domain RM25_RS01110 PF00753 Metallo-beta-lactamase superfamily RM25_RS01110 PF16123 Hydroxyacylglutathione hydrolase C-terminus RM25_RS01115 PF01012 Electron transfer flavoprotein domain RM25_RS01120 PF01012 Electron transfer flavoprotein domain RM25_RS01120 PF00766 Electron transfer flavoprotein FAD-binding domain RM25_RS01125 PF01494 FAD binding domain RM25_RS01140 PF04851 Type III restriction enzyme, res subunit RM25_RS01150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RM25_RS01150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RM25_RS01150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RM25_RS01155 PF03485 Arginyl tRNA synthetase N terminal domain RM25_RS01155 PF00750 tRNA synthetases class I (R) RM25_RS01155 PF05746 DALR anticodon binding domain RM25_RS01160 PF00356 Bacterial regulatory proteins, lacI family RM25_RS01175 PF00083 Sugar (and other) transporter RM25_RS01180 PF00005 ABC transporter RM25_RS01185 PF01032 FecCD transport family RM25_RS01190 PF01032 FecCD transport family RM25_RS01200 PF00480 ROK family RM25_RS01205 PF00939 Sodium:sulfate symporter transmembrane region RM25_RS01210 PF16363 GDP-mannose 4,6 dehydratase RM25_RS01215 PF00440 Bacterial regulatory proteins, tetR family RM25_RS01220 PF00933 Glycosyl hydrolase family 3 N terminal domain RM25_RS01220 PF14310 Fibronectin type III-like domain RM25_RS01220 PF01915 Glycosyl hydrolase family 3 C-terminal domain RM25_RS01225 PF00083 Sugar (and other) transporter RM25_RS01235 PF02308 MgtC family RM25_RS01240 PF07690 Major Facilitator Superfamily RM25_RS01250 PF00293 NUDIX domain RM25_RS01255 PF00294 pfkB family carbohydrate kinase RM25_RS01265 PF00459 Inositol monophosphatase family RM25_RS01270 PF07690 Major Facilitator Superfamily RM25_RS01280 PF00108 Thiolase, N-terminal domain RM25_RS01280 PF02803 Thiolase, C-terminal domain RM25_RS01300 PF00210 Ferritin-like domain RM25_RS01360 PF13419 Haloacid dehalogenase-like hydrolase RM25_RS01365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RM25_RS01375 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RM25_RS01375 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RM25_RS01390 PF00857 Isochorismatase family RM25_RS01400 PF00248 Aldo/keto reductase family RM25_RS01405 PF14256 YwiC-like protein RM25_RS01410 PF05175 Methyltransferase small domain RM25_RS01420 PF00665 Integrase core domain RM25_RS01425 PF14338 Mrr N-terminal domain RM25_RS01425 PF04471 Restriction endonuclease RM25_RS01430 PF03618 Kinase/pyrophosphorylase RM25_RS01435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RM25_RS01435 PF02896 PEP-utilising enzyme, TIM barrel domain RM25_RS01435 PF00391 PEP-utilising enzyme, mobile domain RM25_RS01450 PF00294 pfkB family carbohydrate kinase RM25_RS01455 PF00512 His Kinase A (phospho-acceptor) domain RM25_RS01455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM25_RS01455 PF00672 HAMP domain RM25_RS01460 PF00072 Response regulator receiver domain RM25_RS01460 PF00486 Transcriptional regulatory protein, C terminal RM25_RS01465 PF03180 NLPA lipoprotein RM25_RS01470 PF09383 NIL domain RM25_RS01470 PF00005 ABC transporter RM25_RS01475 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS01490 PF03551 Transcriptional regulator PadR-like family RM25_RS01495 PF03109 ABC1 family RM25_RS01505 PF08543 Phosphomethylpyrimidine kinase RM25_RS01510 PF02581 Thiamine monophosphate synthase RM25_RS01515 PF02110 Hydroxyethylthiazole kinase family RM25_RS01520 PF00324 Amino acid permease RM25_RS01525 PF16916 Dimerisation domain of Zinc Transporter RM25_RS01525 PF01545 Cation efflux family RM25_RS01560 PF01527 Transposase RM25_RS01565 PF00665 Integrase core domain RM25_RS01565 PF13276 HTH-like domain RM25_RS01590 PF02796 Helix-turn-helix domain of resolvase RM25_RS01590 PF00239 Resolvase, N terminal domain RM25_RS01625 PF00665 Integrase core domain RM25_RS01630 PF03605 Anaerobic c4-dicarboxylate membrane transporter RM25_RS01670 PF09827 CRISPR associated protein Cas2 RM25_RS01675 PF01867 CRISPR associated protein Cas1 RM25_RS01675 PF01930 Domain of unknown function DUF83 RM25_RS01705 PF00585 C-terminal regulatory domain of Threonine dehydratase RM25_RS01705 PF00291 Pyridoxal-phosphate dependent enzyme RM25_RS01725 PF07732 Multicopper oxidase RM25_RS01745 PF02575 YbaB/EbfC DNA-binding family RM25_RS01750 PF02132 RecR protein RM25_RS01750 PF13662 Toprim domain RM25_RS01760 PF00133 tRNA synthetases class I (I, L, M and V) RM25_RS01760 PF08264 Anticodon-binding domain of tRNA RM25_RS01765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RM25_RS01765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RM25_RS01770 PF13840 ACT domain RM25_RS01770 PF01842 ACT domain RM25_RS01770 PF00696 Amino acid kinase family RM25_RS01775 PF03023 Lipid II flippase MurJ RM25_RS01780 PF00152 tRNA synthetases class II (D, K and N) RM25_RS01780 PF16995 Transmembrane region of lysyl-tRNA synthetase RM25_RS01780 PF09924 Uncharacterised conserved protein (DUF2156) RM25_RS01780 PF01336 OB-fold nucleic acid binding domain RM25_RS01790 PF00294 pfkB family carbohydrate kinase RM25_RS01795 PF13520 Amino acid permease RM25_RS01820 PF02080 TrkA-C domain RM25_RS01820 PF06826 Predicted Permease Membrane Region RM25_RS01825 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RM25_RS01825 PF02843 Phosphoribosylglycinamide synthetase, C domain RM25_RS01825 PF02844 Phosphoribosylglycinamide synthetase, N domain RM25_RS01830 PF10397 Adenylosuccinate lyase C-terminus RM25_RS01830 PF00206 Lyase RM25_RS01840 PF01259 SAICAR synthetase RM25_RS01845 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RM25_RS01865 PF07690 Major Facilitator Superfamily RM25_RS01910 PF01161 Phosphatidylethanolamine-binding protein RM25_RS01915 PF00271 Helicase conserved C-terminal domain RM25_RS01915 PF08148 DSHCT (NUC185) domain RM25_RS01915 PF00270 DEAD/DEAH box helicase RM25_RS01930 PF00342 Phosphoglucose isomerase RM25_RS01940 PF11954 Domain of unknown function (DUF3471) RM25_RS01940 PF00144 Beta-lactamase RM25_RS01945 PF02913 FAD linked oxidases, C-terminal domain RM25_RS01945 PF01565 FAD binding domain RM25_RS01965 PF13476 AAA domain RM25_RS01970 PF12320 Type 5 capsule protein repressor C-terminal domain RM25_RS01970 PF00149 Calcineurin-like phosphoesterase RM25_RS01975 PF00962 Adenosine/AMP deaminase RM25_RS02000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RM25_RS02000 PF00205 Thiamine pyrophosphate enzyme, central domain RM25_RS02000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RM25_RS02005 PF00999 Sodium/hydrogen exchanger family RM25_RS02025 PF01384 Phosphate transporter family RM25_RS02035 PF13460 NAD(P)H-binding RM25_RS02050 PF08482 ATP-dependent helicase C-terminal RM25_RS02050 PF00271 Helicase conserved C-terminal domain RM25_RS02050 PF04408 Helicase associated domain (HA2) RM25_RS02050 PF00270 DEAD/DEAH box helicase RM25_RS02055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RM25_RS02055 PF14824 Sirohaem biosynthesis protein central RM25_RS02055 PF10414 Sirohaem synthase dimerisation region RM25_RS02060 PF00005 ABC transporter RM25_RS02065 PF02361 Cobalt transport protein RM25_RS02070 PF02553 Cobalt transport protein component CbiN RM25_RS02075 PF01891 Cobalt uptake substrate-specific transmembrane region RM25_RS02085 PF02447 GntP family permease RM25_RS02090 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RM25_RS02090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RM25_RS02095 PF00012 Hsp70 protein RM25_RS02100 PF01025 GrpE RM25_RS02105 PF01556 DnaJ C terminal domain RM25_RS02105 PF00226 DnaJ domain RM25_RS02105 PF00684 DnaJ central domain RM25_RS02110 PF13411 MerR HTH family regulatory protein RM25_RS02120 PF00586 AIR synthase related protein, N-terminal domain RM25_RS02120 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RM25_RS02120 PF02769 AIR synthase related protein, C-terminal domain RM25_RS02125 PF01546 Peptidase family M20/M25/M40 RM25_RS02125 PF07687 Peptidase dimerisation domain RM25_RS02135 PF01268 Formate--tetrahydrofolate ligase RM25_RS02145 PF05167 Uncharacterised ACR (DUF711) RM25_RS02160 PF00156 Phosphoribosyl transferase domain RM25_RS02165 PF00586 AIR synthase related protein, N-terminal domain RM25_RS02165 PF02769 AIR synthase related protein, C-terminal domain RM25_RS02195 PF01476 LysM domain RM25_RS02195 PF00877 NlpC/P60 family RM25_RS02205 PF00005 ABC transporter RM25_RS02205 PF13732 Domain of unknown function (DUF4162) RM25_RS02210 PF00440 Bacterial regulatory proteins, tetR family RM25_RS02220 PF01022 Bacterial regulatory protein, arsR family RM25_RS02225 PF04945 YHS domain RM25_RS02230 PF00155 Aminotransferase class I and II RM25_RS02235 PF00665 Integrase core domain RM25_RS02245 PF08240 Alcohol dehydrogenase GroES-like domain RM25_RS02245 PF13823 Alcohol dehydrogenase GroES-associated RM25_RS02245 PF00107 Zinc-binding dehydrogenase RM25_RS02255 PF00923 Transaldolase/Fructose-6-phosphate aldolase RM25_RS02275 PF01545 Cation efflux family RM25_RS02275 PF16916 Dimerisation domain of Zinc Transporter RM25_RS02280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RM25_RS02280 PF01872 RibD C-terminal domain RM25_RS02300 PF01040 UbiA prenyltransferase family RM25_RS02310 PF01209 ubiE/COQ5 methyltransferase family RM25_RS02315 PF00005 ABC transporter RM25_RS02325 PF00425 chorismate binding enzyme RM25_RS02330 PF01494 FAD binding domain RM25_RS02335 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RM25_RS02340 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RM25_RS02345 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RM25_RS02350 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RM25_RS02360 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RM25_RS02360 PF10531 SLBB domain RM25_RS02360 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RM25_RS02365 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RM25_RS02365 PF00384 Molybdopterin oxidoreductase RM25_RS02365 PF01568 Molydopterin dinucleotide binding domain RM25_RS02370 PF00146 NADH dehydrogenase RM25_RS02375 PF12838 4Fe-4S dicluster domain RM25_RS02380 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RM25_RS02385 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RM25_RS02390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RM25_RS02390 PF00361 Proton-conducting membrane transporter RM25_RS02395 PF00361 Proton-conducting membrane transporter RM25_RS02400 PF00361 Proton-conducting membrane transporter RM25_RS02405 PF00348 Polyprenyl synthetase RM25_RS02420 PF01431 Peptidase family M13 RM25_RS02420 PF05649 Peptidase family M13 RM25_RS02425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RM25_RS02430 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RM25_RS02430 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RM25_RS02430 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RM25_RS02460 PF00578 AhpC/TSA family RM25_RS02465 PF13192 Thioredoxin domain RM25_RS02465 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM25_RS02480 PF00471 Ribosomal protein L33 RM25_RS02485 PF13452 N-terminal half of MaoC dehydratase RM25_RS02495 PF01565 FAD binding domain RM25_RS02495 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RM25_RS02515 PF02357 Transcription termination factor nusG RM25_RS02520 PF03946 Ribosomal protein L11, N-terminal domain RM25_RS02520 PF00298 Ribosomal protein L11, RNA binding domain RM25_RS02525 PF00687 Ribosomal protein L1p/L10e family RM25_RS02530 PF03099 Biotin/lipoate A/B protein ligase family RM25_RS02535 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RM25_RS02535 PF04055 Radical SAM superfamily RM25_RS02540 PF00466 Ribosomal protein L10 RM25_RS02545 PF16320 Ribosomal protein L7/L12 dimerisation domain RM25_RS02545 PF00542 Ribosomal protein L7/L12 C-terminal domain RM25_RS02555 PF04563 RNA polymerase beta subunit RM25_RS02555 PF04565 RNA polymerase Rpb2, domain 3 RM25_RS02555 PF10385 RNA polymerase beta subunit external 1 domain RM25_RS02555 PF00562 RNA polymerase Rpb2, domain 6 RM25_RS02555 PF04561 RNA polymerase Rpb2, domain 2 RM25_RS02555 PF04560 RNA polymerase Rpb2, domain 7 RM25_RS02560 PF00623 RNA polymerase Rpb1, domain 2 RM25_RS02560 PF04998 RNA polymerase Rpb1, domain 5 RM25_RS02560 PF04983 RNA polymerase Rpb1, domain 3 RM25_RS02560 PF04997 RNA polymerase Rpb1, domain 1 RM25_RS02560 PF05000 RNA polymerase Rpb1, domain 4 RM25_RS02565 PF00164 Ribosomal protein S12/S23 RM25_RS02570 PF00177 Ribosomal protein S7p/S5e RM25_RS02575 PF00009 Elongation factor Tu GTP binding domain RM25_RS02575 PF03144 Elongation factor Tu domain 2 RM25_RS02575 PF00679 Elongation factor G C-terminus RM25_RS02575 PF14492 Elongation Factor G, domain II RM25_RS02575 PF03764 Elongation factor G, domain IV RM25_RS02580 PF03144 Elongation factor Tu domain 2 RM25_RS02580 PF03143 Elongation factor Tu C-terminal domain RM25_RS02580 PF00009 Elongation factor Tu GTP binding domain RM25_RS02595 PF00749 tRNA synthetases class I (E and Q), catalytic domain RM25_RS02605 PF00338 Ribosomal protein S10p/S20e RM25_RS02610 PF00297 Ribosomal protein L3 RM25_RS02615 PF00573 Ribosomal protein L4/L1 family RM25_RS02620 PF00276 Ribosomal protein L23 RM25_RS02625 PF00181 Ribosomal Proteins L2, RNA binding domain RM25_RS02625 PF03947 Ribosomal Proteins L2, C-terminal domain RM25_RS02630 PF00203 Ribosomal protein S19 RM25_RS02635 PF00237 Ribosomal protein L22p/L17e RM25_RS02640 PF07650 KH domain RM25_RS02640 PF00189 Ribosomal protein S3, C-terminal domain RM25_RS02645 PF00252 Ribosomal protein L16p/L10e RM25_RS02650 PF00831 Ribosomal L29 protein RM25_RS02655 PF00366 Ribosomal protein S17 RM25_RS02660 PF00238 Ribosomal protein L14p/L23e RM25_RS02665 PF00467 KOW motif RM25_RS02665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RM25_RS02670 PF00281 Ribosomal protein L5 RM25_RS02670 PF00673 ribosomal L5P family C-terminus RM25_RS02675 PF00253 Ribosomal protein S14p/S29e RM25_RS02680 PF00410 Ribosomal protein S8 RM25_RS02685 PF00347 Ribosomal protein L6 RM25_RS02690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RM25_RS02695 PF00333 Ribosomal protein S5, N-terminal domain RM25_RS02695 PF03719 Ribosomal protein S5, C-terminal domain RM25_RS02700 PF00327 Ribosomal protein L30p/L7e RM25_RS02705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RM25_RS02720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RM25_RS02725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RM25_RS02725 PF00005 ABC transporter RM25_RS02730 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS02730 PF12911 N-terminal TM domain of oligopeptide transport permease C RM25_RS02735 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS02745 PF00344 SecY translocase RM25_RS02755 PF00557 Metallopeptidase family M24 RM25_RS02770 PF01176 Translation initiation factor 1A / IF-1 RM25_RS02775 PF00416 Ribosomal protein S13/S18 RM25_RS02780 PF00411 Ribosomal protein S11 RM25_RS02785 PF00163 Ribosomal protein S4/S9 N-terminal domain RM25_RS02785 PF01479 S4 domain RM25_RS02790 PF01000 RNA polymerase Rpb3/RpoA insert domain RM25_RS02790 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RM25_RS02790 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RM25_RS02795 PF01196 Ribosomal protein L17 RM25_RS02800 PF00534 Glycosyl transferases group 1 RM25_RS02800 PF13579 Glycosyl transferase 4-like domain RM25_RS02805 PF06737 Transglycosylase-like domain RM25_RS02805 PF07501 G5 domain RM25_RS02805 PF03990 G5-linked-Ubiquitin-like domain RM25_RS02810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RM25_RS02810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RM25_RS02815 PF00005 ABC transporter RM25_RS02830 PF00005 ABC transporter RM25_RS02845 PF05175 Methyltransferase small domain RM25_RS02850 PF01416 tRNA pseudouridine synthase RM25_RS02855 PF02390 Putative methyltransferase RM25_RS02865 PF03764 Elongation factor G, domain IV RM25_RS02865 PF14492 Elongation Factor G, domain II RM25_RS02865 PF00679 Elongation factor G C-terminus RM25_RS02865 PF00009 Elongation factor Tu GTP binding domain RM25_RS02865 PF03144 Elongation factor Tu domain 2 RM25_RS02870 PF00572 Ribosomal protein L13 RM25_RS02875 PF00380 Ribosomal protein S9/S16 RM25_RS02880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RM25_RS02880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RM25_RS02880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RM25_RS02880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RM25_RS02885 PF00485 Phosphoribulokinase / Uridine kinase family RM25_RS02890 PF01380 SIS domain RM25_RS02895 PF01648 4'-phosphopantetheinyl transferase superfamily RM25_RS02900 PF01256 Carbohydrate kinase RM25_RS02900 PF03853 YjeF-related protein N-terminus RM25_RS02905 PF13439 Glycosyltransferase Family 4 RM25_RS02905 PF00534 Glycosyl transferases group 1 RM25_RS02925 PF00814 Glycoprotease family RM25_RS02935 PF00814 Glycoprotease family RM25_RS02940 PF00881 Nitroreductase family RM25_RS02945 PF03051 Peptidase C1-like family RM25_RS02955 PF07690 Major Facilitator Superfamily RM25_RS02970 PF00571 CBS domain RM25_RS02970 PF00005 ABC transporter RM25_RS02975 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS02980 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RM25_RS02985 PF00166 Chaperonin 10 Kd subunit RM25_RS02990 PF00118 TCP-1/cpn60 chaperonin family RM25_RS02995 PF00571 CBS domain RM25_RS02995 PF00478 IMP dehydrogenase / GMP reductase domain RM25_RS03000 PF00478 IMP dehydrogenase / GMP reductase domain RM25_RS03005 PF02153 Prephenate dehydrogenase RM25_RS03005 PF01817 Chorismate mutase type II RM25_RS03030 PF00132 Bacterial transferase hexapeptide (six repeats) RM25_RS03035 PF00291 Pyridoxal-phosphate dependent enzyme RM25_RS03050 PF11762 L-arabinose isomerase C-terminal domain RM25_RS03050 PF02610 L-arabinose isomerase RM25_RS03055 PF00356 Bacterial regulatory proteins, lacI family RM25_RS03060 PF13407 Periplasmic binding protein domain RM25_RS03070 PF02653 Branched-chain amino acid transport system / permease component RM25_RS03075 PF02653 Branched-chain amino acid transport system / permease component RM25_RS03080 PF02540 NAD synthase RM25_RS03080 PF00958 GMP synthase C terminal domain RM25_RS03080 PF00117 Glutamine amidotransferase class-I RM25_RS03090 PF08659 KR domain RM25_RS03090 PF00550 Phosphopantetheine attachment site RM25_RS03090 PF08240 Alcohol dehydrogenase GroES-like domain RM25_RS03090 PF00698 Acyl transferase domain RM25_RS03090 PF14765 Polyketide synthase dehydratase RM25_RS03095 PF04024 PspC domain RM25_RS03105 PF00072 Response regulator receiver domain RM25_RS03105 PF00196 Bacterial regulatory proteins, luxR family RM25_RS03110 PF04226 Transglycosylase associated protein RM25_RS03120 PF01032 FecCD transport family RM25_RS03125 PF01032 FecCD transport family RM25_RS03135 PF00005 ABC transporter RM25_RS03140 PF13091 PLD-like domain RM25_RS03140 PF13396 Phospholipase_D-nuclease N-terminal RM25_RS03145 PF13361 UvrD-like helicase C-terminal domain RM25_RS03145 PF00580 UvrD/REP helicase N-terminal domain RM25_RS03155 PF00551 Formyl transferase RM25_RS03160 PF02142 MGS-like domain RM25_RS03160 PF01808 AICARFT/IMPCHase bienzyme RM25_RS03165 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RM25_RS03165 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RM25_RS03175 PF00056 lactate/malate dehydrogenase, NAD binding domain RM25_RS03175 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RM25_RS03180 PF00180 Isocitrate/isopropylmalate dehydrogenase RM25_RS03200 PF00571 CBS domain RM25_RS03200 PF01595 Cyclin M transmembrane N-terminal domain RM25_RS03200 PF03471 Transporter associated domain RM25_RS03215 PF00075 RNase H RM25_RS03225 PF00378 Enoyl-CoA hydratase/isomerase RM25_RS03230 PF08264 Anticodon-binding domain of tRNA RM25_RS03230 PF09334 tRNA synthetases class I (M) RM25_RS03235 PF02146 Sir2 family RM25_RS03250 PF13411 MerR HTH family regulatory protein RM25_RS03270 PF00665 Integrase core domain RM25_RS03285 PF00107 Zinc-binding dehydrogenase RM25_RS03285 PF08240 Alcohol dehydrogenase GroES-like domain RM25_RS03295 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RM25_RS03295 PF10371 Domain of unknown function RM25_RS03295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RM25_RS03295 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RM25_RS03295 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RM25_RS03310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RM25_RS03310 PF02785 Biotin carboxylase C-terminal domain RM25_RS03310 PF00289 Biotin carboxylase, N-terminal domain RM25_RS03310 PF00364 Biotin-requiring enzyme RM25_RS03315 PF06827 Zinc finger found in FPG and IleRS RM25_RS03315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RM25_RS03315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RM25_RS03325 PF00293 NUDIX domain RM25_RS03330 PF02545 Maf-like protein RM25_RS03340 PF01039 Carboxyl transferase domain RM25_RS03360 PF00005 ABC transporter RM25_RS03360 PF13732 Domain of unknown function (DUF4162) RM25_RS03380 PF03099 Biotin/lipoate A/B protein ligase family RM25_RS03380 PF02237 Biotin protein ligase C terminal domain RM25_RS03395 PF00665 Integrase core domain RM25_RS03405 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RM25_RS03405 PF02222 ATP-grasp domain RM25_RS03410 PF00731 AIR carboxylase RM25_RS03415 PF03816 Cell envelope-related transcriptional attenuator domain RM25_RS03420 PF01050 Mannose-6-phosphate isomerase RM25_RS03420 PF00483 Nucleotidyl transferase RM25_RS03430 PF02467 Transcription factor WhiB RM25_RS03460 PF03966 Trm112p-like protein RM25_RS03490 PF02446 4-alpha-glucanotransferase RM25_RS03495 PF13378 Enolase C-terminal domain-like RM25_RS03495 PF18374 Enolase N-terminal domain-like RM25_RS03500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RM25_RS03500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RM25_RS03505 PF00005 ABC transporter RM25_RS03505 PF17760 UvrA interaction domain RM25_RS03505 PF17755 UvrA DNA-binding domain RM25_RS03515 PF00425 chorismate binding enzyme RM25_RS03520 PF00501 AMP-binding enzyme RM25_RS03520 PF13193 AMP-binding enzyme C-terminal domain RM25_RS03525 PF00378 Enoyl-CoA hydratase/isomerase RM25_RS03530 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RM25_RS03530 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RM25_RS03535 PF02617 ATP-dependent Clp protease adaptor protein ClpS RM25_RS03545 PF01177 Asp/Glu/Hydantoin racemase RM25_RS03550 PF01138 3' exoribonuclease family, domain 1 RM25_RS03550 PF03725 3' exoribonuclease family, domain 2 RM25_RS03555 PF01725 Ham1 family RM25_RS03560 PF00303 Thymidylate synthase RM25_RS03565 PF00186 Dihydrofolate reductase RM25_RS03570 PF11799 impB/mucB/samB family C-terminal domain RM25_RS03570 PF00817 impB/mucB/samB family RM25_RS03580 PF01642 Methylmalonyl-CoA mutase RM25_RS03580 PF02310 B12 binding domain RM25_RS03585 PF01642 Methylmalonyl-CoA mutase RM25_RS03590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RM25_RS03595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RM25_RS03600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RM25_RS03600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RM25_RS03605 PF01903 CbiX RM25_RS03610 PF01888 CbiD RM25_RS03615 PF02570 Precorrin-8X methylmutase RM25_RS03620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RM25_RS03625 PF02571 Precorrin-6x reductase CbiJ/CobK RM25_RS03630 PF00596 Class II Aldolase and Adducin N-terminal domain RM25_RS03640 PF00578 AhpC/TSA family RM25_RS03660 PF07685 CobB/CobQ-like glutamine amidotransferase domain RM25_RS03665 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RM25_RS03665 PF02875 Mur ligase family, glutamate ligase domain RM25_RS03665 PF08245 Mur ligase middle domain RM25_RS03670 PF13350 Tyrosine phosphatase family RM25_RS03675 PF17760 UvrA interaction domain RM25_RS03675 PF17755 UvrA DNA-binding domain RM25_RS03675 PF00005 ABC transporter RM25_RS03680 PF13291 ACT domain RM25_RS03680 PF04607 Region found in RelA / SpoT proteins RM25_RS03680 PF02824 TGS domain RM25_RS03690 PF00929 Exonuclease RM25_RS03725 PF00665 Integrase core domain RM25_RS03735 PF12848 ABC transporter RM25_RS03735 PF00005 ABC transporter RM25_RS03740 PF02733 Dak1 domain RM25_RS03745 PF02734 DAK2 domain RM25_RS03750 PF00381 PTS HPr component phosphorylation site RM25_RS03750 PF00391 PEP-utilising enzyme, mobile domain RM25_RS03750 PF05524 PEP-utilising enzyme, N-terminal RM25_RS03750 PF03610 PTS system fructose IIA component RM25_RS03760 PF01432 Peptidase family M3 RM25_RS03765 PF13183 4Fe-4S dicluster domain RM25_RS03765 PF01565 FAD binding domain RM25_RS03765 PF02913 FAD linked oxidases, C-terminal domain RM25_RS03775 PF00501 AMP-binding enzyme RM25_RS03785 PF08543 Phosphomethylpyrimidine kinase RM25_RS03790 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RM25_RS03790 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RM25_RS03795 PF01433 Peptidase family M1 domain RM25_RS03795 PF11838 ERAP1-like C-terminal domain RM25_RS03800 PF01323 DSBA-like thioredoxin domain RM25_RS03810 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RM25_RS03810 PF03120 NAD-dependent DNA ligase OB-fold domain RM25_RS03810 PF01653 NAD-dependent DNA ligase adenylation domain RM25_RS03810 PF00533 BRCA1 C Terminus (BRCT) domain RM25_RS03810 PF12826 Helix-hairpin-helix motif RM25_RS03825 PF00893 Small Multidrug Resistance protein RM25_RS03840 PF05698 Bacterial trigger factor protein (TF) C-terminus RM25_RS03840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RM25_RS03840 PF05697 Bacterial trigger factor protein (TF) RM25_RS03845 PF01594 AI-2E family transporter RM25_RS03850 PF01594 AI-2E family transporter RM25_RS03855 PF00574 Clp protease RM25_RS03860 PF00574 Clp protease RM25_RS03865 PF10431 C-terminal, D2-small domain, of ClpB protein RM25_RS03865 PF07724 AAA domain (Cdc48 subfamily) RM25_RS03865 PF06689 ClpX C4-type zinc finger RM25_RS03875 PF14821 Threonine synthase N terminus RM25_RS03875 PF00291 Pyridoxal-phosphate dependent enzyme RM25_RS03880 PF00365 Phosphofructokinase RM25_RS03890 PF00133 tRNA synthetases class I (I, L, M and V) RM25_RS03890 PF08264 Anticodon-binding domain of tRNA RM25_RS03910 PF08245 Mur ligase middle domain RM25_RS03910 PF02875 Mur ligase family, glutamate ligase domain RM25_RS03915 PF00334 Nucleoside diphosphate kinase RM25_RS03930 PF01699 Sodium/calcium exchanger protein RM25_RS03935 PF03741 Integral membrane protein TerC family RM25_RS03950 PF10150 Ribonuclease E/G family RM25_RS03955 PF00829 Ribosomal prokaryotic L21 protein RM25_RS03960 PF01016 Ribosomal L27 protein RM25_RS03965 PF01018 GTP1/OBG RM25_RS03965 PF01926 50S ribosome-binding GTPase RM25_RS03965 PF09269 Domain of unknown function (DUF1967) RM25_RS03970 PF01472 PUA domain RM25_RS03970 PF00696 Amino acid kinase family RM25_RS03980 PF00171 Aldehyde dehydrogenase family RM25_RS03985 PF01467 Cytidylyltransferase-like RM25_RS03995 PF00300 Histidine phosphatase superfamily (branch 1) RM25_RS04025 PF13603 Leucyl-tRNA synthetase, Domain 2 RM25_RS04025 PF09334 tRNA synthetases class I (M) RM25_RS04025 PF00133 tRNA synthetases class I (I, L, M and V) RM25_RS04025 PF08264 Anticodon-binding domain of tRNA RM25_RS04030 PF01979 Amidohydrolase family RM25_RS04035 PF00390 Malic enzyme, N-terminal domain RM25_RS04035 PF03949 Malic enzyme, NAD binding domain RM25_RS04060 PF01649 Ribosomal protein S20 RM25_RS04075 PF00009 Elongation factor Tu GTP binding domain RM25_RS04075 PF00679 Elongation factor G C-terminus RM25_RS04075 PF06421 GTP-binding protein LepA C-terminus RM25_RS04080 PF04055 Radical SAM superfamily RM25_RS04090 PF00459 Inositol monophosphatase family RM25_RS04095 PF01628 HrcA protein C terminal domain RM25_RS04095 PF08220 DeoR-like helix-turn-helix domain RM25_RS04100 PF00684 DnaJ central domain RM25_RS04100 PF01556 DnaJ C terminal domain RM25_RS04100 PF00226 DnaJ domain RM25_RS04105 PF04452 RNA methyltransferase RM25_RS04115 PF01702 Queuine tRNA-ribosyltransferase RM25_RS04125 PF00561 alpha/beta hydrolase fold RM25_RS04135 PF00083 Sugar (and other) transporter RM25_RS04135 PF07690 Major Facilitator Superfamily RM25_RS04140 PF02562 PhoH-like protein RM25_RS04145 PF02130 Uncharacterized protein family UPF0054 RM25_RS04150 PF00571 CBS domain RM25_RS04150 PF03471 Transporter associated domain RM25_RS04150 PF01595 Cyclin M transmembrane N-terminal domain RM25_RS04155 PF01926 50S ribosome-binding GTPase RM25_RS04155 PF07650 KH domain RM25_RS04165 PF07969 Amidohydrolase family RM25_RS04170 PF08502 LeuA allosteric (dimerisation) domain RM25_RS04170 PF00682 HMGL-like RM25_RS04175 PF04343 Protein of unknown function, DUF488 RM25_RS04180 PF01255 Putative undecaprenyl diphosphate synthase RM25_RS04185 PF02565 Recombination protein O C terminal RM25_RS04185 PF11967 Recombination protein O N terminal RM25_RS04195 PF00465 Iron-containing alcohol dehydrogenase RM25_RS04200 PF10662 Ethanolamine utilisation - propanediol utilisation RM25_RS04205 PF00936 BMC domain RM25_RS04215 PF00180 Isocitrate/isopropylmalate dehydrogenase RM25_RS04220 PF01063 Amino-transferase class IV RM25_RS04225 PF00682 HMGL-like RM25_RS04225 PF08502 LeuA allosteric (dimerisation) domain RM25_RS04230 PF01557 Fumarylacetoacetate (FAA) hydrolase family RM25_RS04250 PF09339 IclR helix-turn-helix domain RM25_RS04250 PF01614 Bacterial transcriptional regulator RM25_RS04255 PF00330 Aconitase family (aconitate hydratase) RM25_RS04260 PF00694 Aconitase C-terminal domain RM25_RS04265 PF01553 Acyltransferase RM25_RS04270 PF01820 D-ala D-ala ligase N-terminus RM25_RS04270 PF07478 D-ala D-ala ligase C-terminus RM25_RS04275 PF00665 Integrase core domain RM25_RS04290 PF00586 AIR synthase related protein, N-terminal domain RM25_RS04290 PF02769 AIR synthase related protein, C-terminal domain RM25_RS04295 PF17854 FtsK alpha domain RM25_RS04295 PF09397 Ftsk gamma domain RM25_RS04295 PF01580 FtsK/SpoIIIE family RM25_RS04300 PF00919 Uncharacterized protein family UPF0004 RM25_RS04300 PF04055 Radical SAM superfamily RM25_RS04300 PF18693 TRAM domain RM25_RS04305 PF01066 CDP-alcohol phosphatidyltransferase RM25_RS04310 PF18146 Damage-inducible protein CinA KH domain RM25_RS04310 PF00994 Probable molybdopterin binding domain RM25_RS04310 PF02464 Competence-damaged protein RM25_RS04320 PF00271 Helicase conserved C-terminal domain RM25_RS04320 PF08494 DEAD/H associated RM25_RS04320 PF00270 DEAD/DEAH box helicase RM25_RS04330 PF00154 recA bacterial DNA recombination protein RM25_RS04335 PF02631 RecX family RM25_RS04340 PF00013 KH domain RM25_RS04340 PF01966 HD domain RM25_RS04340 PF12072 Domain of unknown function (DUF3552) RM25_RS04345 PF00005 ABC transporter RM25_RS04350 PF04055 Radical SAM superfamily RM25_RS04350 PF00919 Uncharacterized protein family UPF0004 RM25_RS04360 PF01678 Diaminopimelate epimerase RM25_RS04365 PF01926 50S ribosome-binding GTPase RM25_RS04365 PF13167 GTP-binding GTPase N-terminal RM25_RS04365 PF16360 GTP-binding GTPase Middle Region RM25_RS04370 PF13307 Helicase C-terminal domain RM25_RS04375 PF00717 Peptidase S24-like RM25_RS04375 PF01726 LexA DNA binding domain RM25_RS04385 PF03477 ATP cone domain RM25_RS04390 PF08471 Class II vitamin B12-dependent ribonucleotide reductase RM25_RS04390 PF02867 Ribonucleotide reductase, barrel domain RM25_RS04400 PF04324 BFD-like [2Fe-2S] binding domain RM25_RS04400 PF01266 FAD dependent oxidoreductase RM25_RS04405 PF00890 FAD binding domain RM25_RS04410 PF13183 4Fe-4S dicluster domain RM25_RS04410 PF02754 Cysteine-rich domain RM25_RS04415 PF04198 Putative sugar-binding domain RM25_RS04425 PF09363 XFP C-terminal domain RM25_RS04425 PF09364 XFP N-terminal domain RM25_RS04425 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RM25_RS04430 PF00271 Helicase conserved C-terminal domain RM25_RS04430 PF11898 Domain of unknown function (DUF3418) RM25_RS04430 PF04408 Helicase associated domain (HA2) RM25_RS04430 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RM25_RS04430 PF00270 DEAD/DEAH box helicase RM25_RS04440 PF01547 Bacterial extracellular solute-binding protein RM25_RS04450 PF04545 Sigma-70, region 4 RM25_RS04450 PF04542 Sigma-70 region 2 RM25_RS04450 PF00140 Sigma-70 factor, region 1.2 RM25_RS04450 PF04539 Sigma-70 region 3 RM25_RS04455 PF04542 Sigma-70 region 2 RM25_RS04455 PF04539 Sigma-70 region 3 RM25_RS04455 PF04545 Sigma-70, region 4 RM25_RS04455 PF00140 Sigma-70 factor, region 1.2 RM25_RS04460 PF00056 lactate/malate dehydrogenase, NAD binding domain RM25_RS04460 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RM25_RS04470 PF00986 DNA gyrase B subunit, carboxyl terminus RM25_RS04470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM25_RS04470 PF00204 DNA gyrase B RM25_RS04470 PF01751 Toprim domain RM25_RS04475 PF08546 Ketopantoate reductase PanE/ApbA C terminal RM25_RS04475 PF02558 Ketopantoate reductase PanE/ApbA RM25_RS04480 PF03989 DNA gyrase C-terminal domain, beta-propeller RM25_RS04480 PF00521 DNA gyrase/topoisomerase IV, subunit A RM25_RS04525 PF02254 TrkA-N domain RM25_RS04525 PF02080 TrkA-C domain RM25_RS04530 PF02254 TrkA-N domain RM25_RS04530 PF02080 TrkA-C domain RM25_RS04535 PF13520 Amino acid permease RM25_RS04540 PF01938 TRAM domain RM25_RS04540 PF05958 tRNA (Uracil-5-)-methyltransferase RM25_RS04565 PF13409 Glutathione S-transferase, N-terminal domain RM25_RS04570 PF07690 Major Facilitator Superfamily RM25_RS04575 PF00330 Aconitase family (aconitate hydratase) RM25_RS04575 PF00694 Aconitase C-terminal domain RM25_RS04590 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RM25_RS04590 PF02779 Transketolase, pyrimidine binding domain RM25_RS04590 PF02780 Transketolase, C-terminal domain RM25_RS04610 PF01641 SelR domain RM25_RS04615 PF03976 Polyphosphate kinase 2 (PPK2) RM25_RS04620 PF00665 Integrase core domain RM25_RS04650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RM25_RS04650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RM25_RS04650 PF03129 Anticodon binding domain RM25_RS04655 PF01230 HIT domain RM25_RS04660 PF01066 CDP-alcohol phosphatidyltransferase RM25_RS04670 PF13439 Glycosyltransferase Family 4 RM25_RS04675 PF01066 CDP-alcohol phosphatidyltransferase RM25_RS04680 PF05949 Bacterial protein of unknown function (DUF881) RM25_RS04685 PF06947 Protein of unknown function (DUF1290) RM25_RS04690 PF05949 Bacterial protein of unknown function (DUF881) RM25_RS04695 PF01597 Glycine cleavage H-protein RM25_RS04700 PF00498 FHA domain RM25_RS04705 PF00376 MerR family regulatory protein RM25_RS04715 PF13411 MerR HTH family regulatory protein RM25_RS04720 PF02347 Glycine cleavage system P-protein RM25_RS04725 PF03631 Virulence factor BrkB RM25_RS04735 PF12857 TOBE-like domain RM25_RS04735 PF00005 ABC transporter RM25_RS04745 PF02654 Cobalamin-5-phosphate synthase RM25_RS04750 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RM25_RS04755 PF07685 CobB/CobQ-like glutamine amidotransferase domain RM25_RS04755 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RM25_RS04760 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RM25_RS04765 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RM25_RS04765 PF07685 CobB/CobQ-like glutamine amidotransferase domain RM25_RS04770 PF03186 CobD/Cbib protein RM25_RS04780 PF00982 Glycosyltransferase family 20 RM25_RS04790 PF00982 Glycosyltransferase family 20 RM25_RS04810 PF03747 ADP-ribosylglycohydrolase RM25_RS04835 PF08543 Phosphomethylpyrimidine kinase RM25_RS04835 PF02581 Thiamine monophosphate synthase RM25_RS04835 PF03070 TENA/THI-4/PQQC family RM25_RS04840 PF08275 DNA primase catalytic core, N-terminal domain RM25_RS04840 PF13662 Toprim domain RM25_RS04840 PF08278 DNA primase DnaG DnaB-binding RM25_RS04840 PF10410 DnaB-helicase binding domain of primase RM25_RS04840 PF01807 CHC2 zinc finger RM25_RS04860 PF00365 Phosphofructokinase RM25_RS04870 PF01300 Telomere recombination RM25_RS04880 PF02585 GlcNAc-PI de-N-acetylase RM25_RS04890 PF00005 ABC transporter RM25_RS04890 PF09383 NIL domain RM25_RS04895 PF02653 Branched-chain amino acid transport system / permease component RM25_RS04905 PF00300 Histidine phosphatase superfamily (branch 1) RM25_RS04910 PF00749 tRNA synthetases class I (E and Q), catalytic domain RM25_RS04910 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RM25_RS04920 PF01502 Phosphoribosyl-AMP cyclohydrolase RM25_RS04925 PF00425 chorismate binding enzyme RM25_RS04925 PF04715 Anthranilate synthase component I, N terminal region RM25_RS04930 PF00218 Indole-3-glycerol phosphate synthase RM25_RS04935 PF00291 Pyridoxal-phosphate dependent enzyme RM25_RS04940 PF00290 Tryptophan synthase alpha chain RM25_RS04945 PF01790 Prolipoprotein diacylglyceryl transferase RM25_RS04950 PF01493 GXGXG motif RM25_RS04950 PF01645 Conserved region in glutamate synthase RM25_RS04950 PF04898 Glutamate synthase central domain RM25_RS04950 PF00310 Glutamine amidotransferases class-II RM25_RS04955 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RM25_RS04955 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM25_RS04965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RM25_RS04965 PF14579 Helix-hairpin-helix motif RM25_RS04965 PF02811 PHP domain RM25_RS04965 PF01336 OB-fold nucleic acid binding domain RM25_RS04965 PF07733 Bacterial DNA polymerase III alpha NTPase domain RM25_RS04975 PF04073 Aminoacyl-tRNA editing domain RM25_RS04985 PF00815 Histidinol dehydrogenase RM25_RS04990 PF00155 Aminotransferase class I and II RM25_RS04995 PF00475 Imidazoleglycerol-phosphate dehydratase RM25_RS05000 PF00117 Glutamine amidotransferase class-I RM25_RS05005 PF00977 Histidine biosynthesis protein RM25_RS05015 PF01709 Transcriptional regulator RM25_RS05020 PF02075 Crossover junction endodeoxyribonuclease RuvC RM25_RS05025 PF01330 RuvA N terminal domain RM25_RS05025 PF07499 RuvA, C-terminal domain RM25_RS05030 PF05496 Holliday junction DNA helicase RuvB P-loop domain RM25_RS05030 PF05491 RuvB C-terminal winged helix domain RM25_RS05030 PF17864 RuvB AAA lid domain RM25_RS05040 PF07549 SecD/SecF GG Motif RM25_RS05040 PF02355 Protein export membrane protein RM25_RS05045 PF02355 Protein export membrane protein RM25_RS05045 PF07549 SecD/SecF GG Motif RM25_RS05050 PF00156 Phosphoribosyl transferase domain RM25_RS05055 PF02824 TGS domain RM25_RS05055 PF04607 Region found in RelA / SpoT proteins RM25_RS05055 PF13291 ACT domain RM25_RS05060 PF03993 Domain of Unknown Function (DUF349) RM25_RS05065 PF00753 Metallo-beta-lactamase superfamily RM25_RS05070 PF03129 Anticodon binding domain RM25_RS05070 PF13393 Histidyl-tRNA synthetase RM25_RS05075 PF03306 Alpha-acetolactate decarboxylase RM25_RS05085 PF02938 GAD domain RM25_RS05085 PF01336 OB-fold nucleic acid binding domain RM25_RS05085 PF00152 tRNA synthetases class II (D, K and N) RM25_RS05090 PF12002 MgsA AAA+ ATPase C terminal RM25_RS05090 PF00004 ATPase family associated with various cellular activities (AAA) RM25_RS05090 PF16193 AAA C-terminal domain RM25_RS05095 PF00056 lactate/malate dehydrogenase, NAD binding domain RM25_RS05095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RM25_RS05100 PF02272 DHHA1 domain RM25_RS05100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RM25_RS05100 PF01411 tRNA synthetases class II (A) RM25_RS05105 PF03652 Holliday junction resolvase RM25_RS05110 PF02618 YceG-like family RM25_RS05115 PF01264 Chorismate synthase RM25_RS05120 PF01761 3-dehydroquinate synthase RM25_RS05125 PF09285 Elongation factor P, C-terminal RM25_RS05125 PF08207 Elongation factor P (EF-P) KOW-like domain RM25_RS05125 PF01132 Elongation factor P (EF-P) OB domain RM25_RS05130 PF01029 NusB family RM25_RS05135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RM25_RS05135 PF00117 Glutamine amidotransferase class-I RM25_RS05140 PF02142 MGS-like domain RM25_RS05140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RM25_RS05140 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RM25_RS05145 PF01180 Dihydroorotate dehydrogenase RM25_RS05150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RM25_RS05160 PF00625 Guanylate kinase RM25_RS05165 PF01192 RNA polymerase Rpb6 RM25_RS05170 PF02772 S-adenosylmethionine synthetase, central domain RM25_RS05170 PF00438 S-adenosylmethionine synthetase, N-terminal domain RM25_RS05170 PF02773 S-adenosylmethionine synthetase, C-terminal domain RM25_RS05175 PF17764 3′ DNA-binding domain (3′BD) RM25_RS05180 PF00551 Formyl transferase RM25_RS05180 PF02911 Formyl transferase, C-terminal domain RM25_RS05185 PF01189 16S rRNA methyltransferase RsmB/F RM25_RS05185 PF01029 NusB family RM25_RS05190 PF00834 Ribulose-phosphate 3 epimerase family RM25_RS05195 PF03051 Peptidase C1-like family RM25_RS05205 PF02310 B12 binding domain RM25_RS05205 PF02965 Vitamin B12 dependent methionine synthase, activation domain RM25_RS05205 PF02574 Homocysteine S-methyltransferase RM25_RS05205 PF00809 Pterin binding enzyme RM25_RS05205 PF02607 B12 binding domain RM25_RS05215 PF13419 Haloacid dehalogenase-like hydrolase RM25_RS05220 PF08704 tRNA methyltransferase complex GCD14 subunit RM25_RS05225 PF00227 Proteasome subunit RM25_RS05230 PF00227 Proteasome subunit RM25_RS05235 PF02153 Prephenate dehydrogenase RM25_RS05235 PF01842 ACT domain RM25_RS05240 PF02224 Cytidylate kinase RM25_RS05245 PF01926 50S ribosome-binding GTPase RM25_RS05245 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RM25_RS05260 PF08362 YcdC-like protein, C-terminal region RM25_RS05260 PF00440 Bacterial regulatory proteins, tetR family RM25_RS05270 PF00892 EamA-like transporter family RM25_RS05290 PF02664 S-Ribosylhomocysteinase (LuxS) RM25_RS05295 PF07690 Major Facilitator Superfamily RM25_RS05300 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS05305 PF09084 NMT1/THI5 like RM25_RS05310 PF00561 alpha/beta hydrolase fold RM25_RS05315 PF01209 ubiE/COQ5 methyltransferase family RM25_RS05320 PF01037 Lrp/AsnC ligand binding domain RM25_RS05325 PF00795 Carbon-nitrogen hydrolase RM25_RS05325 PF00535 Glycosyl transferase family 2 RM25_RS05330 PF00535 Glycosyl transferase family 2 RM25_RS05335 PF13397 RNA polymerase-binding protein RM25_RS05350 PF08543 Phosphomethylpyrimidine kinase RM25_RS05355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RM25_RS05360 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM25_RS05360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RM25_RS05365 PF13458 Periplasmic binding protein RM25_RS05370 PF02653 Branched-chain amino acid transport system / permease component RM25_RS05375 PF02653 Branched-chain amino acid transport system / permease component RM25_RS05375 PF11862 Domain of unknown function (DUF3382) RM25_RS05380 PF00005 ABC transporter RM25_RS05380 PF12399 Branched-chain amino acid ATP-binding cassette transporter RM25_RS05385 PF00005 ABC transporter RM25_RS05390 PF00571 CBS domain RM25_RS05395 PF03610 PTS system fructose IIA component RM25_RS05400 PF00557 Metallopeptidase family M24 RM25_RS05400 PF01321 Creatinase/Prolidase N-terminal domain RM25_RS05410 PF09924 Uncharacterised conserved protein (DUF2156) RM25_RS05415 PF02637 GatB domain RM25_RS05415 PF02934 GatB/GatE catalytic domain RM25_RS05420 PF01425 Amidase RM25_RS05425 PF02686 Glu-tRNAGln amidotransferase C subunit RM25_RS05450 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RM25_RS05450 PF00128 Alpha amylase, catalytic domain RM25_RS05465 PF00665 Integrase core domain RM25_RS05465 PF13276 HTH-like domain RM25_RS05475 PF00343 Carbohydrate phosphorylase RM25_RS05475 PF11897 Protein of unknown function (DUF3417) RM25_RS05480 PF11896 Domain of unknown function (DUF3416) RM25_RS05485 PF00128 Alpha amylase, catalytic domain RM25_RS05485 PF16657 Maltogenic Amylase, C-terminal domain RM25_RS05495 PF00128 Alpha amylase, catalytic domain RM25_RS05495 PF02806 Alpha amylase, C-terminal all-beta domain RM25_RS05495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RM25_RS05500 PF00300 Histidine phosphatase superfamily (branch 1) RM25_RS05500 PF00293 NUDIX domain RM25_RS05505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RM25_RS05505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RM25_RS05505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RM25_RS05505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RM25_RS05510 PF00085 Thioredoxin RM25_RS05530 PF01939 Endonuclease NucS RM25_RS05540 PF00561 alpha/beta hydrolase fold RM25_RS05545 PF01923 Cobalamin adenosyltransferase RM25_RS05550 PF10437 Bacterial lipoate protein ligase C-terminus RM25_RS05550 PF03099 Biotin/lipoate A/B protein ligase family RM25_RS05560 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RM25_RS05565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RM25_RS05565 PF02874 ATP synthase alpha/beta family, beta-barrel domain RM25_RS05570 PF00231 ATP synthase RM25_RS05575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RM25_RS05575 PF00306 ATP synthase alpha/beta chain, C terminal domain RM25_RS05575 PF02874 ATP synthase alpha/beta family, beta-barrel domain RM25_RS05580 PF00213 ATP synthase delta (OSCP) subunit RM25_RS05585 PF00430 ATP synthase B/B' CF(0) RM25_RS05590 PF00137 ATP synthase subunit C RM25_RS05595 PF00119 ATP synthase A chain RM25_RS05610 PF00953 Glycosyl transferase family 4 RM25_RS05615 PF01300 Telomere recombination RM25_RS05620 PF13649 Methyltransferase domain RM25_RS05620 PF17827 PrmC N-terminal domain RM25_RS05625 PF03462 PCRF domain RM25_RS05625 PF00472 RF-1 domain RM25_RS05630 PF01197 Ribosomal protein L31 RM25_RS05635 PF07497 Rho termination factor, RNA-binding domain RM25_RS05635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RM25_RS05635 PF07497 Rho termination factor, RNA-binding domain RM25_RS05635 PF07498 Rho termination factor, N-terminal domain RM25_RS05635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RM25_RS05635 PF07498 Rho termination factor, N-terminal domain RM25_RS05645 PF00742 Homoserine dehydrogenase RM25_RS05645 PF03447 Homoserine dehydrogenase, NAD binding domain RM25_RS05645 PF01842 ACT domain RM25_RS05650 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RM25_RS05650 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RM25_RS05675 PF16870 2-oxoglutarate dehydrogenase C-terminal RM25_RS05675 PF16078 2-oxoglutarate dehydrogenase N-terminus RM25_RS05675 PF02779 Transketolase, pyrimidine binding domain RM25_RS05675 PF00676 Dehydrogenase E1 component RM25_RS05675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RM25_RS05680 PF02467 Transcription factor WhiB RM25_RS05685 PF07568 Histidine kinase RM25_RS05685 PF12282 Signal transduction histidine kinase RM25_RS05685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM25_RS05695 PF04542 Sigma-70 region 2 RM25_RS05695 PF08281 Sigma-70, region 4 RM25_RS05700 PF02586 SOS response associated peptidase (SRAP) RM25_RS05705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RM25_RS05710 PF03193 RsgA GTPase RM25_RS05715 PF00459 Inositol monophosphatase family RM25_RS05745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RM25_RS05745 PF01842 ACT domain RM25_RS05745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RM25_RS05750 PF00005 ABC transporter RM25_RS05750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RM25_RS05755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RM25_RS05755 PF00005 ABC transporter RM25_RS05760 PF12911 N-terminal TM domain of oligopeptide transport permease C RM25_RS05760 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS05765 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS05770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RM25_RS05780 PF06968 Biotin and Thiamin Synthesis associated domain RM25_RS05780 PF04055 Radical SAM superfamily RM25_RS05790 PF00561 alpha/beta hydrolase fold RM25_RS05805 PF03699 Uncharacterised protein family (UPF0182) RM25_RS05825 PF00665 Integrase core domain RM25_RS05845 PF13361 UvrD-like helicase C-terminal domain RM25_RS05845 PF00580 UvrD/REP helicase N-terminal domain RM25_RS05845 PF00570 HRDC domain RM25_RS05855 PF12705 PD-(D/E)XK nuclease superfamily RM25_RS05855 PF00580 UvrD/REP helicase N-terminal domain RM25_RS05855 PF13361 UvrD-like helicase C-terminal domain RM25_RS05860 PF13538 UvrD-like helicase C-terminal domain RM25_RS05865 PF00293 NUDIX domain RM25_RS05865 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain RM25_RS05865 PF09297 NADH pyrophosphatase zinc ribbon domain RM25_RS05870 PF13361 UvrD-like helicase C-terminal domain RM25_RS05870 PF00580 UvrD/REP helicase N-terminal domain RM25_RS05875 PF13361 UvrD-like helicase C-terminal domain RM25_RS05875 PF12705 PD-(D/E)XK nuclease superfamily RM25_RS05875 PF00580 UvrD/REP helicase N-terminal domain RM25_RS05880 PF00313 'Cold-shock' DNA-binding domain RM25_RS05900 PF00271 Helicase conserved C-terminal domain RM25_RS05900 PF00270 DEAD/DEAH box helicase RM25_RS05905 PF00579 tRNA synthetases class I (W and Y) RM25_RS05915 PF10698 Protein of unknown function (DUF2505) RM25_RS05940 PF07516 SecA Wing and Scaffold domain RM25_RS05940 PF07517 SecA DEAD-like domain RM25_RS05940 PF01043 SecA preprotein cross-linking domain RM25_RS05945 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RM25_RS05945 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RM25_RS05950 PF00156 Phosphoribosyl transferase domain RM25_RS05955 PF00486 Transcriptional regulatory protein, C terminal RM25_RS05955 PF00072 Response regulator receiver domain RM25_RS05960 PF02622 Uncharacterized ACR, COG1678 RM25_RS05970 PF01668 SmpB protein RM25_RS05980 PF10145 Phage-related minor tail protein RM25_RS05980 PF01464 Transglycosylase SLT domain RM25_RS05980 PF01551 Peptidase family M23 RM25_RS05985 PF02687 FtsX-like permease family RM25_RS05985 PF18075 FtsX extracellular domain RM25_RS05990 PF00005 ABC transporter RM25_RS05995 PF03462 PCRF domain RM25_RS05995 PF00472 RF-1 domain RM25_RS06015 PF00202 Aminotransferase class-III RM25_RS06020 PF00795 Carbon-nitrogen hydrolase RM25_RS06025 PF00324 Amino acid permease RM25_RS06030 PF00011 Hsp20/alpha crystallin family RM25_RS06035 PF00664 ABC transporter transmembrane region RM25_RS06035 PF00005 ABC transporter RM25_RS06040 PF11253 Protein of unknown function (DUF3052) RM25_RS06045 PF17831 Pyruvate dehydrogenase E1 component middle domain RM25_RS06045 PF00456 Transketolase, thiamine diphosphate binding domain RM25_RS06050 PF00155 Aminotransferase class I and II RM25_RS06055 PF17853 GGDEF-like domain RM25_RS06055 PF13556 PucR C-terminal helix-turn-helix domain RM25_RS06060 PF00698 Acyl transferase domain RM25_RS06065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RM25_RS06065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RM25_RS06070 PF00550 Phosphopantetheine attachment site RM25_RS06075 PF02801 Beta-ketoacyl synthase, C-terminal domain RM25_RS06075 PF00109 Beta-ketoacyl synthase, N-terminal domain RM25_RS06085 PF12146 Serine aminopeptidase, S33 RM25_RS06090 PF01168 Alanine racemase, N-terminal domain RM25_RS06095 PF07584 Aerotolerance regulator N-terminal RM25_RS06095 PF13519 von Willebrand factor type A domain RM25_RS06100 PF13519 von Willebrand factor type A domain RM25_RS06100 PF07584 Aerotolerance regulator N-terminal RM25_RS06105 PF01882 Protein of unknown function DUF58 RM25_RS06110 PF17863 AAA lid domain RM25_RS06110 PF07726 ATPase family associated with various cellular activities (AAA) RM25_RS06125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RM25_RS06125 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM25_RS06135 PF03649 Uncharacterised protein family (UPF0014) RM25_RS06140 PF01966 HD domain RM25_RS06140 PF13286 Phosphohydrolase-associated domain RM25_RS06145 PF01207 Dihydrouridine synthase (Dus) RM25_RS06155 PF02910 Fumarate reductase flavoprotein C-term RM25_RS06155 PF00890 FAD binding domain RM25_RS06170 PF02445 Quinolinate synthetase A protein RM25_RS06175 PF00890 FAD binding domain RM25_RS06175 PF02910 Fumarate reductase flavoprotein C-term RM25_RS06180 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RM25_RS06180 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RM25_RS06185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RM25_RS06185 PF03129 Anticodon binding domain RM25_RS06190 PF01297 Zinc-uptake complex component A periplasmic RM25_RS06195 PF00005 ABC transporter RM25_RS06200 PF00950 ABC 3 transport family RM25_RS06205 PF01475 Ferric uptake regulator family RM25_RS06215 PF00171 Aldehyde dehydrogenase family RM25_RS06220 PF01923 Cobalamin adenosyltransferase RM25_RS06225 PF03319 Ethanolamine utilisation protein EutN/carboxysome RM25_RS06240 PF00936 BMC domain RM25_RS06245 PF00936 BMC domain RM25_RS06255 PF08841 Diol dehydratase reactivase ATPase-like domain RM25_RS06255 PF18427 DD-reactivating factor swiveling domain RM25_RS06260 PF02287 Dehydratase small subunit RM25_RS06265 PF02288 Dehydratase medium subunit RM25_RS06270 PF02286 Dehydratase large subunit RM25_RS06275 PF00936 BMC domain RM25_RS06280 PF00936 BMC domain RM25_RS06300 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RM25_RS06300 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RM25_RS06305 PF10369 Small subunit of acetolactate synthase RM25_RS06305 PF01842 ACT domain RM25_RS06310 PF00205 Thiamine pyrophosphate enzyme, central domain RM25_RS06310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RM25_RS06310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RM25_RS06320 PF00977 Histidine biosynthesis protein RM25_RS06325 PF00248 Aldo/keto reductase family RM25_RS06335 PF00271 Helicase conserved C-terminal domain RM25_RS06335 PF00270 DEAD/DEAH box helicase RM25_RS06335 PF08148 DSHCT (NUC185) domain RM25_RS06350 PF00902 Sec-independent protein translocase protein (TatC) RM25_RS06360 PF13280 WYL domain RM25_RS06365 PF13280 WYL domain RM25_RS06370 PF00749 tRNA synthetases class I (E and Q), catalytic domain RM25_RS06380 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RM25_RS06380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RM25_RS06385 PF00849 RNA pseudouridylate synthase RM25_RS06385 PF01479 S4 domain RM25_RS06390 PF04079 Segregation and condensation complex subunit ScpB RM25_RS06395 PF02616 Segregation and condensation protein ScpA RM25_RS06405 PF13614 AAA domain RM25_RS06410 PF00589 Phage integrase family RM25_RS06410 PF02899 Phage integrase, N-terminal SAM-like domain RM25_RS06415 PF00293 NUDIX domain RM25_RS06420 PF06418 CTP synthase N-terminus RM25_RS06420 PF00117 Glutamine amidotransferase class-I RM25_RS06425 PF02463 RecF/RecN/SMC N terminal domain RM25_RS06430 PF01513 ATP-NAD kinase RM25_RS06445 PF00005 ABC transporter RM25_RS06455 PF18407 GCN5-related N-acetyltransferase like domain RM25_RS06455 PF13344 Haloacid dehalogenase-like hydrolase RM25_RS06480 PF00579 tRNA synthetases class I (W and Y) RM25_RS06485 PF00206 Lyase RM25_RS06485 PF14698 Argininosuccinate lyase C-terminal RM25_RS06490 PF01316 Arginine repressor, DNA binding domain RM25_RS06490 PF02863 Arginine repressor, C-terminal domain RM25_RS06495 PF00202 Aminotransferase class-III RM25_RS06500 PF00696 Amino acid kinase family RM25_RS06505 PF01960 ArgJ family RM25_RS06510 PF01118 Semialdehyde dehydrogenase, NAD binding domain RM25_RS06510 PF02774 Semialdehyde dehydrogenase, dimerisation domain RM25_RS06515 PF00155 Aminotransferase class I and II RM25_RS06520 PF03484 tRNA synthetase B5 domain RM25_RS06520 PF03147 Ferredoxin-fold anticodon binding domain RM25_RS06520 PF03483 B3/4 domain RM25_RS06520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RM25_RS06520 PF01588 Putative tRNA binding domain RM25_RS06525 PF01409 tRNA synthetases class II core domain (F) RM25_RS06525 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RM25_RS06530 PF08032 RNA 2'-O ribose methyltransferase substrate binding RM25_RS06530 PF00588 SpoU rRNA Methylase family RM25_RS06535 PF00453 Ribosomal protein L20 RM25_RS06540 PF01632 Ribosomal protein L35 RM25_RS06545 PF00707 Translation initiation factor IF-3, C-terminal domain RM25_RS06545 PF05198 Translation initiation factor IF-3, N-terminal domain RM25_RS06555 PF01634 ATP phosphoribosyltransferase RM25_RS06555 PF08029 HisG, C-terminal domain RM25_RS06560 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RM25_RS06565 PF17862 AAA+ lid domain RM25_RS06565 PF00004 ATPase family associated with various cellular activities (AAA) RM25_RS06565 PF01434 Peptidase family M41 RM25_RS06570 PF01406 tRNA synthetases class I (C) catalytic domain RM25_RS06575 PF00248 Aldo/keto reductase family RM25_RS06605 PF02673 Bacitracin resistance protein BacA RM25_RS06615 PF00291 Pyridoxal-phosphate dependent enzyme RM25_RS06620 PF17782 DprA winged helix domain RM25_RS06620 PF02481 DNA recombination-mediator protein A RM25_RS06625 PF13335 Magnesium chelatase, subunit ChlI C-terminal RM25_RS06625 PF01078 Magnesium chelatase, subunit ChlI RM25_RS06630 PF02021 Uncharacterised protein family UPF0102 RM25_RS06635 PF10611 Protein of unknown function (DUF2469) RM25_RS06640 PF01351 Ribonuclease HII RM25_RS06645 PF10502 Signal peptidase, peptidase S26 RM25_RS06650 PF01245 Ribosomal protein L19 RM25_RS06655 PF13085 2Fe-2S iron-sulfur cluster binding domain RM25_RS06655 PF13183 4Fe-4S dicluster domain RM25_RS06660 PF00890 FAD binding domain RM25_RS06660 PF02910 Fumarate reductase flavoprotein C-term RM25_RS06670 PF07859 alpha/beta hydrolase fold RM25_RS06670 PF00331 Glycosyl hydrolase family 10 RM25_RS06675 PF01746 tRNA (Guanine-1)-methyltransferase RM25_RS06680 PF01782 RimM N-terminal domain RM25_RS06680 PF05239 PRC-barrel domain RM25_RS06690 PF00886 Ribosomal protein S16 RM25_RS06695 PF01979 Amidohydrolase family RM25_RS06700 PF00448 SRP54-type protein, GTPase domain RM25_RS06700 PF02881 SRP54-type protein, helical bundle domain RM25_RS06700 PF02978 Signal peptide binding domain RM25_RS06705 PF00448 SRP54-type protein, GTPase domain RM25_RS06705 PF02881 SRP54-type protein, helical bundle domain RM25_RS06710 PF00665 Integrase core domain RM25_RS06720 PF06470 SMC proteins Flexible Hinge Domain RM25_RS06720 PF02463 RecF/RecN/SMC N terminal domain RM25_RS06730 PF06827 Zinc finger found in FPG and IleRS RM25_RS06730 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RM25_RS06730 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RM25_RS06735 PF00035 Double-stranded RNA binding motif RM25_RS06735 PF14622 Ribonuclease-III-like RM25_RS06740 PF02620 Large ribosomal RNA subunit accumulation protein YceD RM25_RS06745 PF01467 Cytidylyltransferase-like RM25_RS06760 PF00271 Helicase conserved C-terminal domain RM25_RS06760 PF00270 DEAD/DEAH box helicase RM25_RS06760 PF17191 RecG wedge domain RM25_RS06765 PF00830 Ribosomal L28 family RM25_RS06770 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RM25_RS06770 PF12706 Beta-lactamase superfamily domain RM25_RS06770 PF17770 Ribonuclease J C-terminal domain RM25_RS06785 PF01113 Dihydrodipicolinate reductase, N-terminus RM25_RS06785 PF05173 Dihydrodipicolinate reductase, C-terminus RM25_RS06790 PF00013 KH domain RM25_RS06790 PF00575 S1 RNA binding domain RM25_RS06790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RM25_RS06790 PF01138 3' exoribonuclease family, domain 1 RM25_RS06795 PF00312 Ribosomal protein S15 RM25_RS06800 PF06574 FAD synthetase RM25_RS06800 PF01687 Riboflavin kinase RM25_RS06805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RM25_RS06805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RM25_RS06810 PF00230 Major intrinsic protein RM25_RS06815 PF09142 tRNA Pseudouridine synthase II, C terminal RM25_RS06815 PF16198 tRNA pseudouridylate synthase B C-terminal domain RM25_RS06815 PF01509 TruB family pseudouridylate synthase (N terminal domain) RM25_RS06820 PF02033 Ribosome-binding factor A RM25_RS06825 PF00009 Elongation factor Tu GTP binding domain RM25_RS06825 PF04760 Translation initiation factor IF-2, N-terminal region RM25_RS06825 PF11987 Translation-initiation factor 2 RM25_RS06835 PF13184 NusA-like KH domain RM25_RS06835 PF08529 NusA N-terminal domain RM25_RS06840 PF02576 RimP N-terminal domain RM25_RS06840 PF17384 RimP C-terminal SH3 domain RM25_RS06850 PF03129 Anticodon binding domain RM25_RS06850 PF04073 Aminoacyl-tRNA editing domain RM25_RS06850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RM25_RS06855 PF00583 Acetyltransferase (GNAT) family RM25_RS06860 PF04551 GcpE protein RM25_RS06865 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RM25_RS06865 PF13288 DXP reductoisomerase C-terminal domain RM25_RS06865 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RM25_RS06870 PF04055 Radical SAM superfamily RM25_RS06880 PF01765 Ribosome recycling factor RM25_RS06885 PF00696 Amino acid kinase family RM25_RS06890 PF00889 Elongation factor TS RM25_RS06895 PF00318 Ribosomal protein S2 RM25_RS06910 PF02899 Phage integrase, N-terminal SAM-like domain RM25_RS06910 PF00589 Phage integrase family RM25_RS06915 PF01327 Polypeptide deformylase RM25_RS06920 PF00588 SpoU rRNA Methylase family RM25_RS06925 PF13593 SBF-like CPA transporter family (DUF4137) RM25_RS06930 PF00005 ABC transporter RM25_RS06955 PF13649 Methyltransferase domain RM25_RS06960 PF12848 ABC transporter RM25_RS06960 PF00005 ABC transporter RM25_RS06960 PF16326 ABC transporter C-terminal domain RM25_RS06965 PF01883 Iron-sulfur cluster assembly protein RM25_RS06970 PF01592 NifU-like N terminal domain RM25_RS06975 PF00266 Aminotransferase class-V RM25_RS06980 PF00005 ABC transporter RM25_RS06985 PF00355 Rieske [2Fe-2S] domain RM25_RS06990 PF01458 Uncharacterized protein family (UPF0051) RM25_RS06995 PF01458 Uncharacterized protein family (UPF0051) RM25_RS07005 PF00392 Bacterial regulatory proteins, gntR family RM25_RS07010 PF00005 ABC transporter RM25_RS07020 PF01174 SNO glutamine amidotransferase family RM25_RS07025 PF01680 SOR/SNZ family RM25_RS07030 PF00392 Bacterial regulatory proteins, gntR family RM25_RS07035 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RM25_RS07035 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RM25_RS07045 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RM25_RS07055 PF03840 Preprotein translocase SecG subunit RM25_RS07060 PF00121 Triosephosphate isomerase RM25_RS07065 PF00162 Phosphoglycerate kinase RM25_RS07070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RM25_RS07070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RM25_RS07080 PF00005 ABC transporter RM25_RS07085 PF14527 WhiA LAGLIDADG-like domain RM25_RS07085 PF10298 WhiA N-terminal LAGLIDADG-like domain RM25_RS07085 PF02650 WhiA C-terminal HTH domain RM25_RS07090 PF01933 Uncharacterised protein family UPF0052 RM25_RS07095 PF03668 P-loop ATPase protein family RM25_RS07100 PF01541 GIY-YIG catalytic domain RM25_RS07100 PF08459 UvrC Helix-hairpin-helix N-terminal RM25_RS07100 PF02151 UvrB/uvrC motif RM25_RS07105 PF07730 Histidine kinase RM25_RS07110 PF00072 Response regulator receiver domain RM25_RS07110 PF00196 Bacterial regulatory proteins, luxR family RM25_RS07115 PF00005 ABC transporter RM25_RS07115 PF13732 Domain of unknown function (DUF4162) RM25_RS07130 PF00005 ABC transporter RM25_RS07130 PF17755 UvrA DNA-binding domain RM25_RS07130 PF17760 UvrA interaction domain RM25_RS07140 PF00753 Metallo-beta-lactamase superfamily RM25_RS07145 PF03741 Integral membrane protein TerC family RM25_RS07150 PF04851 Type III restriction enzyme, res subunit RM25_RS07150 PF00271 Helicase conserved C-terminal domain RM25_RS07150 PF12344 Ultra-violet resistance protein B RM25_RS07150 PF02151 UvrB/uvrC motif RM25_RS07150 PF17757 UvrB interaction domain RM25_RS07155 PF01121 Dephospho-CoA kinase RM25_RS07165 PF00575 S1 RNA binding domain RM25_RS07170 PF00171 Aldehyde dehydrogenase family RM25_RS07180 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RM25_RS07180 PF01367 5'-3' exonuclease, C-terminal SAM fold RM25_RS07180 PF00476 DNA polymerase family A RM25_RS07185 PF00072 Response regulator receiver domain RM25_RS07185 PF03861 ANTAR domain RM25_RS07195 PF00224 Pyruvate kinase, barrel domain RM25_RS07195 PF02887 Pyruvate kinase, alpha/beta domain RM25_RS07200 PF00849 RNA pseudouridylate synthase RM25_RS07205 PF01252 Signal peptidase (SPase) II RM25_RS07210 PF01258 Prokaryotic dksA/traR C4-type zinc finger RM25_RS07225 PF04472 Cell division protein SepF RM25_RS07230 PF02578 Multi-copper polyphenol oxidoreductase laccase RM25_RS07235 PF12327 FtsZ family, C-terminal domain RM25_RS07235 PF00091 Tubulin/FtsZ family, GTPase domain RM25_RS07240 PF08478 POTRA domain, FtsQ-type RM25_RS07240 PF03799 Cell division protein FtsQ RM25_RS07245 PF01225 Mur ligase family, catalytic domain RM25_RS07245 PF02875 Mur ligase family, glutamate ligase domain RM25_RS07245 PF08245 Mur ligase middle domain RM25_RS07250 PF03033 Glycosyltransferase family 28 N-terminal domain RM25_RS07250 PF04101 Glycosyltransferase family 28 C-terminal domain RM25_RS07255 PF01098 Cell cycle protein RM25_RS07260 PF02875 Mur ligase family, glutamate ligase domain RM25_RS07260 PF08245 Mur ligase middle domain RM25_RS07265 PF00953 Glycosyl transferase family 4 RM25_RS07265 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RM25_RS07270 PF08245 Mur ligase middle domain RM25_RS07270 PF02875 Mur ligase family, glutamate ligase domain RM25_RS07270 PF01225 Mur ligase family, catalytic domain RM25_RS07275 PF01225 Mur ligase family, catalytic domain RM25_RS07275 PF08245 Mur ligase middle domain RM25_RS07275 PF02875 Mur ligase family, glutamate ligase domain RM25_RS07280 PF00905 Penicillin binding protein transpeptidase domain RM25_RS07280 PF03717 Penicillin-binding Protein dimerisation domain RM25_RS07290 PF01795 MraW methylase family RM25_RS07295 PF02381 MraZ protein, putative antitoxin-like RM25_RS07305 PF00817 impB/mucB/samB family RM25_RS07305 PF11799 impB/mucB/samB family C-terminal domain RM25_RS07310 PF02811 PHP domain RM25_RS07310 PF14579 Helix-hairpin-helix motif RM25_RS07310 PF07733 Bacterial DNA polymerase III alpha NTPase domain RM25_RS07310 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RM25_RS07320 PF00570 HRDC domain RM25_RS07320 PF13361 UvrD-like helicase C-terminal domain RM25_RS07325 PF02219 Methylenetetrahydrofolate reductase RM25_RS07330 PF00348 Polyprenyl synthetase RM25_RS07335 PF03793 PASTA domain RM25_RS07335 PF00069 Protein kinase domain RM25_RS07350 PF01474 Class-II DAHP synthetase family RM25_RS07375 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RM25_RS07405 PF02885 Glycosyl transferase family, helical bundle domain RM25_RS07405 PF00591 Glycosyl transferase family, a/b domain RM25_RS07415 PF00478 IMP dehydrogenase / GMP reductase domain RM25_RS07415 PF00571 CBS domain RM25_RS07420 PF01521 Iron-sulphur cluster biosynthesis RM25_RS07450 PF01571 Aminomethyltransferase folate-binding domain RM25_RS07450 PF08669 Glycine cleavage T-protein C-terminal barrel domain RM25_RS07455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RM25_RS07455 PF00364 Biotin-requiring enzyme RM25_RS07455 PF02817 e3 binding domain RM25_RS07465 PF16326 ABC transporter C-terminal domain RM25_RS07465 PF00005 ABC transporter RM25_RS07465 PF12848 ABC transporter RM25_RS07470 PF03951 Glutamine synthetase, beta-Grasp domain RM25_RS07470 PF00120 Glutamine synthetase, catalytic domain RM25_RS07485 PF00106 short chain dehydrogenase RM25_RS07490 PF03710 Glutamate-ammonia ligase adenylyltransferase RM25_RS07490 PF08335 GlnD PII-uridylyltransferase RM25_RS07500 PF00120 Glutamine synthetase, catalytic domain RM25_RS07500 PF03951 Glutamine synthetase, beta-Grasp domain RM25_RS07515 PF00557 Metallopeptidase family M24 RM25_RS07525 PF02591 C4-type zinc ribbon domain RM25_RS07530 PF00557 Metallopeptidase family M24 RM25_RS07530 PF05195 Aminopeptidase P, N-terminal domain RM25_RS07540 PF03328 HpcH/HpaI aldolase/citrate lyase family RM25_RS07555 PF01883 Iron-sulfur cluster assembly protein RM25_RS07555 PF10609 NUBPL iron-transfer P-loop NTPase RM25_RS07560 PF02416 mttA/Hcf106 family RM25_RS07565 PF00701 Dihydrodipicolinate synthetase family RM25_RS07570 PF01596 O-methyltransferase RM25_RS07575 PF00483 Nucleotidyl transferase RM25_RS07580 PF13439 Glycosyltransferase Family 4 RM25_RS07580 PF00534 Glycosyl transferases group 1 RM25_RS07595 PF03641 Possible lysine decarboxylase RM25_RS07600 PF07687 Peptidase dimerisation domain RM25_RS07600 PF01546 Peptidase family M20/M25/M40 RM25_RS07605 PF14602 Hexapeptide repeat of succinyl-transferase RM25_RS07605 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle RM25_RS07615 PF00155 Aminotransferase class I and II RM25_RS07620 PF00037 4Fe-4S binding domain RM25_RS07625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RM25_RS07625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RM25_RS07630 PF10415 Fumarase C C-terminus RM25_RS07630 PF00206 Lyase RM25_RS07640 PF00206 Lyase RM25_RS07640 PF10415 Fumarase C C-terminus RM25_RS07645 PF10415 Fumarase C C-terminus RM25_RS07645 PF00206 Lyase RM25_RS07650 PF03605 Anaerobic c4-dicarboxylate membrane transporter RM25_RS07675 PF00156 Phosphoribosyl transferase domain RM25_RS07680 PF01546 Peptidase family M20/M25/M40 RM25_RS07680 PF07687 Peptidase dimerisation domain RM25_RS07695 PF00291 Pyridoxal-phosphate dependent enzyme RM25_RS07710 PF07690 Major Facilitator Superfamily RM25_RS07715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RM25_RS07730 PF07690 Major Facilitator Superfamily RM25_RS07735 PF02595 Glycerate kinase family RM25_RS07740 PF02554 Carbon starvation protein CstA RM25_RS07740 PF13722 5TM C-terminal transporter carbon starvation CstA RM25_RS07750 PF03466 LysR substrate binding domain RM25_RS07750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RM25_RS07755 PF03601 Conserved hypothetical protein 698 RM25_RS07760 PF00899 ThiF family RM25_RS07760 PF00581 Rhodanese-like domain RM25_RS07765 PF05690 Thiazole biosynthesis protein ThiG RM25_RS07775 PF05690 Thiazole biosynthesis protein ThiG RM25_RS07775 PF01266 FAD dependent oxidoreductase RM25_RS07780 PF02581 Thiamine monophosphate synthase RM25_RS07785 PF03601 Conserved hypothetical protein 698 RM25_RS07795 PF01266 FAD dependent oxidoreductase RM25_RS07795 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RM25_RS07820 PF07690 Major Facilitator Superfamily RM25_RS07825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RM25_RS07825 PF03466 LysR substrate binding domain RM25_RS07860 PF00665 Integrase core domain RM25_RS07860 PF13936 Helix-turn-helix domain RM25_RS07875 PF08774 VRR-NUC domain RM25_RS07875 PF04851 Type III restriction enzyme, res subunit RM25_RS07880 PF01555 DNA methylase RM25_RS07880 PF18273 Type III R-M EcoP15I C-terminal domain RM25_RS07890 PF01555 DNA methylase RM25_RS07890 PF18273 Type III R-M EcoP15I C-terminal domain RM25_RS07905 PF01926 50S ribosome-binding GTPase RM25_RS07905 PF06071 Protein of unknown function (DUF933) RM25_RS07910 PF02127 Aminopeptidase I zinc metalloprotease (M18) RM25_RS07915 PF02646 RmuC family RM25_RS07920 PF02401 LytB protein RM25_RS07925 PF02601 Exonuclease VII, large subunit RM25_RS07925 PF13742 OB-fold nucleic acid binding domain RM25_RS07930 PF02609 Exonuclease VII small subunit RM25_RS07935 PF03006 Haemolysin-III related RM25_RS07940 PF01255 Putative undecaprenyl diphosphate synthase RM25_RS07950 PF03190 Protein of unknown function, DUF255 RM25_RS07955 PF02585 GlcNAc-PI de-N-acetylase RM25_RS07960 PF03449 Transcription elongation factor, N-terminal RM25_RS07960 PF01272 Transcription elongation factor, GreA/GreB, C-term RM25_RS07975 PF01594 AI-2E family transporter RM25_RS07980 PF03167 Uracil DNA glycosylase superfamily RM25_RS07985 PF01625 Peptide methionine sulfoxide reductase RM25_RS08020 PF02245 Methylpurine-DNA glycosylase (MPG) RM25_RS08050 PF13520 Amino acid permease RM25_RS08055 PF03952 Enolase, N-terminal domain RM25_RS08055 PF00113 Enolase, C-terminal TIM barrel domain RM25_RS08065 PF07690 Major Facilitator Superfamily RM25_RS08070 PF00005 ABC transporter RM25_RS08080 PF02909 Tetracyclin repressor-like, C-terminal domain RM25_RS08080 PF00440 Bacterial regulatory proteins, tetR family RM25_RS08090 PF02541 Ppx/GppA phosphatase family RM25_RS08105 PF00113 Enolase, C-terminal TIM barrel domain RM25_RS08105 PF03952 Enolase, N-terminal domain RM25_RS08110 PF03819 MazG nucleotide pyrophosphohydrolase domain RM25_RS08120 PF00665 Integrase core domain RM25_RS08125 PF00270 DEAD/DEAH box helicase RM25_RS08125 PF00271 Helicase conserved C-terminal domain RM25_RS08125 PF02559 CarD-like/TRCF domain RM25_RS08125 PF17757 UvrB interaction domain RM25_RS08125 PF03461 TRCF domain RM25_RS08135 PF01195 Peptidyl-tRNA hydrolase RM25_RS08140 PF14693 Ribosomal protein TL5, C-terminal domain RM25_RS08140 PF01386 Ribosomal L25p family RM25_RS08145 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RM25_RS08145 PF14572 Phosphoribosyl synthetase-associated domain RM25_RS08150 PF00132 Bacterial transferase hexapeptide (six repeats) RM25_RS08150 PF12804 MobA-like NTP transferase domain RM25_RS08155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RM25_RS08155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RM25_RS08160 PF18665 Tetracyclin repressor-like, C-terminal domain RM25_RS08160 PF00440 Bacterial regulatory proteins, tetR family RM25_RS08165 PF08544 GHMP kinases C terminal RM25_RS08165 PF00288 GHMP kinases N terminal domain RM25_RS08170 PF00398 Ribosomal RNA adenine dimethylase RM25_RS08175 PF01026 TatD related DNase RM25_RS08180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RM25_RS08190 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase RM25_RS08190 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RM25_RS08200 PF00860 Permease family RM25_RS08210 PF00288 GHMP kinases N terminal domain RM25_RS08210 PF10509 Galactokinase galactose-binding signature RM25_RS08210 PF08544 GHMP kinases C terminal RM25_RS08220 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RM25_RS08225 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RM25_RS08240 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RM25_RS08240 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RM25_RS08245 PF07690 Major Facilitator Superfamily RM25_RS08255 PF00083 Sugar (and other) transporter RM25_RS08260 PF07690 Major Facilitator Superfamily RM25_RS08300 PF00072 Response regulator receiver domain RM25_RS08300 PF00196 Bacterial regulatory proteins, luxR family RM25_RS08305 PF07730 Histidine kinase RM25_RS08330 PF00226 DnaJ domain RM25_RS08330 PF01556 DnaJ C terminal domain RM25_RS08330 PF00684 DnaJ central domain RM25_RS08335 PF01025 GrpE RM25_RS08340 PF00012 Hsp70 protein RM25_RS08345 PF13180 PDZ domain RM25_RS08360 PF00072 Response regulator receiver domain RM25_RS08360 PF00196 Bacterial regulatory proteins, luxR family RM25_RS08365 PF05384 Sensor protein DegS RM25_RS08365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM25_RS08365 PF07730 Histidine kinase RM25_RS08370 PF00665 Integrase core domain RM25_RS08375 PF00582 Universal stress protein family RM25_RS08380 PF17871 AAA lid domain RM25_RS08380 PF00004 ATPase family associated with various cellular activities (AAA) RM25_RS08380 PF07724 AAA domain (Cdc48 subfamily) RM25_RS08380 PF02861 Clp amino terminal domain, pathogenicity island component RM25_RS08380 PF10431 C-terminal, D2-small domain, of ClpB protein RM25_RS08390 PF00085 Thioredoxin RM25_RS08435 PF00248 Aldo/keto reductase family RM25_RS08485 PF13302 Acetyltransferase (GNAT) domain RM25_RS08510 PF01741 Large-conductance mechanosensitive channel, MscL RM25_RS08550 PF00085 Thioredoxin RM25_RS08555 PF01325 Iron dependent repressor, N-terminal DNA binding domain RM25_RS08555 PF02742 Iron dependent repressor, metal binding and dimerisation domain RM25_RS08555 PF18357 Diphteria toxin repressor SH3 domain RM25_RS08560 PF00266 Aminotransferase class-V RM25_RS08570 PF00860 Permease family RM25_RS08580 PF11228 Protein of unknown function (DUF3027) RM25_RS08585 PF00313 'Cold-shock' DNA-binding domain RM25_RS08625 PF13683 Integrase core domain RM25_RS08625 PF13276 HTH-like domain RM25_RS08630 PF01527 Transposase RM25_RS08635 PF00293 NUDIX domain RM25_RS08655 PF00118 TCP-1/cpn60 chaperonin family RM25_RS08665 PF01238 Phosphomannose isomerase type I RM25_RS08675 PF03176 MMPL family RM25_RS08690 PF01661 Macro domain RM25_RS08700 PF07687 Peptidase dimerisation domain RM25_RS08700 PF01546 Peptidase family M20/M25/M40 RM25_RS08705 PF03315 Serine dehydratase beta chain RM25_RS08705 PF03313 Serine dehydratase alpha chain RM25_RS08710 PF00005 ABC transporter RM25_RS08710 PF17912 MalK OB fold domain RM25_RS08715 PF01053 Cys/Met metabolism PLP-dependent enzyme RM25_RS08730 PF02589 LUD domain RM25_RS08735 PF11870 Domain of unknown function (DUF3390) RM25_RS08735 PF13183 4Fe-4S dicluster domain RM25_RS08735 PF02589 LUD domain RM25_RS08740 PF02754 Cysteine-rich domain RM25_RS08745 PF02652 L-lactate permease RM25_RS08750 PF07729 FCD domain RM25_RS08750 PF00392 Bacterial regulatory proteins, gntR family RM25_RS08755 PF01406 tRNA synthetases class I (C) catalytic domain RM25_RS08755 PF09190 DALR domain RM25_RS08760 PF08032 RNA 2'-O ribose methyltransferase substrate binding RM25_RS08760 PF00588 SpoU rRNA Methylase family RM25_RS08765 PF00324 Amino acid permease RM25_RS08770 PF00324 Amino acid permease RM25_RS08775 PF17763 Glutaminase/Asparaginase C-terminal domain RM25_RS08775 PF00710 Asparaginase, N-terminal RM25_RS08780 PF00464 Serine hydroxymethyltransferase RM25_RS08785 PF02542 YgbB family RM25_RS08790 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RM25_RS08795 PF02559 CarD-like/TRCF domain RM25_RS08805 PF00072 Response regulator receiver domain RM25_RS08805 PF00486 Transcriptional regulatory protein, C terminal RM25_RS08810 PF00512 His Kinase A (phospho-acceptor) domain RM25_RS08810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM25_RS08815 PF01895 PhoU domain RM25_RS08820 PF00300 Histidine phosphatase superfamily (branch 1) RM25_RS08830 PF00106 short chain dehydrogenase RM25_RS08835 PF00364 Biotin-requiring enzyme RM25_RS08840 PF01039 Carboxyl transferase domain RM25_RS08845 PF01039 Carboxyl transferase domain RM25_RS08850 PF00682 HMGL-like RM25_RS08850 PF02436 Conserved carboxylase domain RM25_RS08855 PF00202 Aminotransferase class-III RM25_RS08865 PF07690 Major Facilitator Superfamily RM25_RS08870 PF00490 Delta-aminolevulinic acid dehydratase RM25_RS08875 PF00762 Ferrochelatase RM25_RS08880 PF01593 Flavin containing amine oxidoreductase RM25_RS08885 PF04055 Radical SAM superfamily RM25_RS08885 PF13186 Iron-sulfur cluster-binding domain RM25_RS08890 PF01208 Uroporphyrinogen decarboxylase (URO-D) RM25_RS08895 PF03900 Porphobilinogen deaminase, C-terminal domain RM25_RS08895 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RM25_RS08900 PF01488 Shikimate / quinate 5-dehydrogenase RM25_RS08900 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RM25_RS08900 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RM25_RS08905 PF13537 Glutamine amidotransferase domain RM25_RS08905 PF00733 Asparagine synthase RM25_RS08910 PF00920 Dehydratase family RM25_RS08915 PF01810 LysE type translocator RM25_RS08920 PF01261 Xylose isomerase-like TIM barrel RM25_RS08930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RM25_RS08930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RM25_RS08935 PF00923 Transaldolase/Fructose-6-phosphate aldolase RM25_RS08945 PF00294 pfkB family carbohydrate kinase RM25_RS08955 PF04962 KduI/IolB family RM25_RS08960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RM25_RS08960 PF00205 Thiamine pyrophosphate enzyme, central domain RM25_RS08960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RM25_RS08965 PF00171 Aldehyde dehydrogenase family RM25_RS08970 PF00083 Sugar (and other) transporter RM25_RS08980 PF00107 Zinc-binding dehydrogenase RM25_RS08980 PF08240 Alcohol dehydrogenase GroES-like domain RM25_RS08990 PF01116 Fructose-bisphosphate aldolase class-II RM25_RS09005 PF09335 SNARE associated Golgi protein RM25_RS09010 PF04011 LemA family RM25_RS09015 PF00156 Phosphoribosyl transferase domain RM25_RS09030 PF03169 OPT oligopeptide transporter protein RM25_RS09035 PF10431 C-terminal, D2-small domain, of ClpB protein RM25_RS09035 PF02861 Clp amino terminal domain, pathogenicity island component RM25_RS09035 PF17871 AAA lid domain RM25_RS09035 PF07724 AAA domain (Cdc48 subfamily) RM25_RS09035 PF00004 ATPase family associated with various cellular activities (AAA) RM25_RS09040 PF00202 Aminotransferase class-III RM25_RS09050 PF00709 Adenylosuccinate synthetase RM25_RS09060 PF00171 Aldehyde dehydrogenase family RM25_RS09065 PF01156 Inosine-uridine preferring nucleoside hydrolase RM25_RS09075 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RM25_RS09075 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RM25_RS09080 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RM25_RS09080 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RM25_RS09085 PF07732 Multicopper oxidase RM25_RS09085 PF00394 Multicopper oxidase RM25_RS09085 PF07731 Multicopper oxidase RM25_RS09090 PF01527 Transposase RM25_RS09095 PF13276 HTH-like domain RM25_RS09095 PF00665 Integrase core domain RM25_RS09120 PF00905 Penicillin binding protein transpeptidase domain RM25_RS09120 PF00912 Transglycosylase RM25_RS09125 PF02467 Transcription factor WhiB RM25_RS09135 PF01042 Endoribonuclease L-PSP RM25_RS09140 PF10576 Iron-sulfur binding domain of endonuclease III RM25_RS09140 PF00730 HhH-GPD superfamily base excision DNA repair protein RM25_RS09140 PF00633 Helix-hairpin-helix motif RM25_RS09145 PF00293 NUDIX domain RM25_RS09155 PF00391 PEP-utilising enzyme, mobile domain RM25_RS09155 PF05524 PEP-utilising enzyme, N-terminal RM25_RS09155 PF02896 PEP-utilising enzyme, TIM barrel domain RM25_RS09160 PF00381 PTS HPr component phosphorylation site RM25_RS09165 PF04945 YHS domain RM25_RS09195 PF00085 Thioredoxin RM25_RS09200 PF00498 FHA domain RM25_RS09200 PF12401 Protein of unknown function (DUF2662) RM25_RS09205 PF16697 Inner membrane component of T3SS, cytoplasmic domain RM25_RS09215 PF01098 Cell cycle protein RM25_RS09220 PF00905 Penicillin binding protein transpeptidase domain RM25_RS09225 PF03793 PASTA domain RM25_RS09225 PF00069 Protein kinase domain RM25_RS09235 PF10509 Galactokinase galactose-binding signature RM25_RS09235 PF08544 GHMP kinases C terminal RM25_RS09235 PF00288 GHMP kinases N terminal domain RM25_RS09240 PF01106 NifU-like domain RM25_RS09245 PF02421 Ferrous iron transport protein B RM25_RS09245 PF07664 Ferrous iron transport protein B C terminus RM25_RS09245 PF07670 Nucleoside recognition RM25_RS09260 PF00999 Sodium/hydrogen exchanger family RM25_RS09260 PF02080 TrkA-C domain RM25_RS09260 PF03471 Transporter associated domain RM25_RS09275 PF14437 MafB19-like deaminase RM25_RS09300 PF00746 LPXTG cell wall anchor motif RM25_RS09300 PF16555 Gram-positive pilin subunit D1, N-terminal domain RM25_RS09305 PF16555 Gram-positive pilin subunit D1, N-terminal domain RM25_RS09305 PF00746 LPXTG cell wall anchor motif RM25_RS09320 PF00679 Elongation factor G C-terminus RM25_RS09320 PF00009 Elongation factor Tu GTP binding domain RM25_RS09320 PF03144 Elongation factor Tu domain 2 RM25_RS09320 PF14492 Elongation Factor G, domain II RM25_RS09325 PF01571 Aminomethyltransferase folate-binding domain RM25_RS09330 PF08768 Domain of unknown function (DUF1794) RM25_RS09335 PF02580 D-Tyr-tRNA(Tyr) deacylase RM25_RS09340 PF00486 Transcriptional regulatory protein, C terminal RM25_RS09350 PF01658 Myo-inositol-1-phosphate synthase RM25_RS09355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RM25_RS09355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RM25_RS09370 PF13673 Acetyltransferase (GNAT) domain RM25_RS09370 PF00583 Acetyltransferase (GNAT) family RM25_RS09375 PF13090 Polyphosphate kinase C-terminal domain 2 RM25_RS09375 PF02503 Polyphosphate kinase middle domain RM25_RS09375 PF13089 Polyphosphate kinase N-terminal domain RM25_RS09375 PF17941 Polyphosphate kinase C-terminal domain 1 RM25_RS09385 PF12849 PBP superfamily domain RM25_RS09390 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS09395 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS09400 PF00005 ABC transporter RM25_RS09405 PF01451 Low molecular weight phosphotyrosine protein phosphatase RM25_RS09410 PF01022 Bacterial regulatory protein, arsR family RM25_RS09415 PF06953 Arsenical resistance operon trans-acting repressor ArsD RM25_RS09420 PF02374 Anion-transporting ATPase RM25_RS09425 PF01915 Glycosyl hydrolase family 3 C-terminal domain RM25_RS09425 PF00933 Glycosyl hydrolase family 3 N terminal domain RM25_RS09430 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM25_RS09430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RM25_RS09435 PF00300 Histidine phosphatase superfamily (branch 1) RM25_RS09445 PF03807 NADP oxidoreductase coenzyme F420-dependent RM25_RS09445 PF14748 Pyrroline-5-carboxylate reductase dimerisation RM25_RS09450 PF01118 Semialdehyde dehydrogenase, NAD binding domain RM25_RS09450 PF02774 Semialdehyde dehydrogenase, dimerisation domain RM25_RS09455 PF06736 Protein of unknown function (DUF1211) RM25_RS09465 PF01261 Xylose isomerase-like TIM barrel RM25_RS09475 PF18073 Rubredoxin metal binding domain RM25_RS09475 PF06745 KaiC RM25_RS09480 PF02457 DisA bacterial checkpoint controller nucleotide-binding RM25_RS09480 PF10635 DisA bacterial checkpoint controller linker region RM25_RS09480 PF00633 Helix-hairpin-helix motif RM25_RS09485 PF00730 HhH-GPD superfamily base excision DNA repair protein RM25_RS09485 PF00633 Helix-hairpin-helix motif RM25_RS09490 PF09819 ABC-type cobalt transport system, permease component RM25_RS09495 PF00005 ABC transporter RM25_RS09510 PF01487 Type I 3-dehydroquinase RM25_RS09520 PF10431 C-terminal, D2-small domain, of ClpB protein RM25_RS09520 PF02861 Clp amino terminal domain, pathogenicity island component RM25_RS09520 PF17871 AAA lid domain RM25_RS09520 PF07724 AAA domain (Cdc48 subfamily) RM25_RS09520 PF00004 ATPase family associated with various cellular activities (AAA) RM25_RS09525 PF11774 Lsr2 RM25_RS09530 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RM25_RS09535 PF02152 Dihydroneopterin aldolase RM25_RS09540 PF00809 Pterin binding enzyme RM25_RS09545 PF00392 Bacterial regulatory proteins, gntR family RM25_RS09550 PF01227 GTP cyclohydrolase I RM25_RS09555 PF05970 PIF1-like helicase RM25_RS09560 PF00156 Phosphoribosyl transferase domain RM25_RS09565 PF09179 TilS substrate binding domain RM25_RS09565 PF01171 PP-loop family RM25_RS09580 PF00719 Inorganic pyrophosphatase RM25_RS09590 PF00300 Histidine phosphatase superfamily (branch 1) RM25_RS09605 PF00909 Ammonium Transporter Family RM25_RS09610 PF00543 Nitrogen regulatory protein P-II RM25_RS09615 PF01593 Flavin containing amine oxidoreductase RM25_RS09620 PF00324 Amino acid permease RM25_RS09630 PF00005 ABC transporter RM25_RS09640 PF04468 PSP1 C-terminal conserved region RM25_RS09650 PF09115 DNA polymerase III, delta subunit, C terminal RM25_RS09655 PF02223 Thymidylate kinase RM25_RS09665 PF01131 DNA topoisomerase RM25_RS09665 PF01751 Toprim domain RM25_RS09665 PF13368 Topoisomerase C-terminal repeat RM25_RS09670 PF05175 Methyltransferase small domain RM25_RS09670 PF08468 Methyltransferase small domain N-terminal RM25_RS09680 PF09369 Domain of unknown function (DUF1998) RM25_RS09680 PF00271 Helicase conserved C-terminal domain RM25_RS09680 PF00270 DEAD/DEAH box helicase RM25_RS09690 PF12800 4Fe-4S binding domain RM25_RS09690 PF13247 4Fe-4S dicluster domain RM25_RS09695 PF00384 Molybdopterin oxidoreductase RM25_RS09695 PF01568 Molydopterin dinucleotide binding domain RM25_RS09695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RM25_RS09745 PF00437 Type II/IV secretion system protein RM25_RS09760 PF06965 Na+/H+ antiporter 1 RM25_RS09780 PF00403 Heavy-metal-associated domain RM25_RS09790 PF02583 Metal-sensitive transcriptional repressor RM25_RS09795 PF00772 DnaB-like helicase N terminal domain RM25_RS09795 PF03796 DnaB-like helicase C terminal domain RM25_RS09805 PF07690 Major Facilitator Superfamily RM25_RS09810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RM25_RS09815 PF08241 Methyltransferase domain RM25_RS09840 PF02581 Thiamine monophosphate synthase RM25_RS09840 PF13667 ThiC-associated domain RM25_RS09840 PF01964 Radical SAM ThiC family RM25_RS09845 PF00474 Sodium:solute symporter family RM25_RS09860 PF01566 Natural resistance-associated macrophage protein RM25_RS09905 PF01555 DNA methylase RM25_RS09915 PF07728 AAA domain (dynein-related subfamily) RM25_RS09915 PF12102 Domain of unknown function (DUF3578) RM25_RS09935 PF13276 HTH-like domain RM25_RS09935 PF00665 Integrase core domain RM25_RS09955 PF00885 6,7-dimethyl-8-ribityllumazine synthase RM25_RS09965 PF00677 Lumazine binding domain RM25_RS09970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RM25_RS09970 PF01872 RibD C-terminal domain RM25_RS09985 PF02446 4-alpha-glucanotransferase RM25_RS10000 PF02233 NAD(P) transhydrogenase beta subunit RM25_RS10005 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RM25_RS10005 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RM25_RS10005 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RM25_RS10015 PF00005 ABC transporter RM25_RS10015 PF13732 Domain of unknown function (DUF4162) RM25_RS10025 PF00005 ABC transporter RM25_RS10025 PF12857 TOBE-like domain RM25_RS10030 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS10035 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS10045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RM25_RS10045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RM25_RS10050 PF01507 Phosphoadenosine phosphosulfate reductase family RM25_RS10055 PF01507 Phosphoadenosine phosphosulfate reductase family RM25_RS10060 PF00009 Elongation factor Tu GTP binding domain RM25_RS10065 PF02502 Ribose/Galactose Isomerase RM25_RS10070 PF08241 Methyltransferase domain RM25_RS10080 PF00665 Integrase core domain RM25_RS10085 PF02910 Fumarate reductase flavoprotein C-term RM25_RS10085 PF00890 FAD binding domain RM25_RS10090 PF01869 BadF/BadG/BcrA/BcrD ATPase family RM25_RS10095 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS10120 PF07690 Major Facilitator Superfamily RM25_RS10125 PF00384 Molybdopterin oxidoreductase RM25_RS10125 PF01568 Molydopterin dinucleotide binding domain RM25_RS10135 PF00384 Molybdopterin oxidoreductase RM25_RS10135 PF01568 Molydopterin dinucleotide binding domain RM25_RS10140 PF13247 4Fe-4S dicluster domain RM25_RS10140 PF14711 Respiratory nitrate reductase beta C-terminal RM25_RS10150 PF00384 Molybdopterin oxidoreductase RM25_RS10150 PF02613 Nitrate reductase delta subunit RM25_RS10150 PF02665 Nitrate reductase gamma subunit RM25_RS10160 PF02391 MoaE protein RM25_RS10165 PF00899 ThiF family RM25_RS10165 PF00581 Rhodanese-like domain RM25_RS10170 PF00994 Probable molybdopterin binding domain RM25_RS10170 PF03453 MoeA N-terminal region (domain I and II) RM25_RS10170 PF03454 MoeA C-terminal region (domain IV) RM25_RS10175 PF01967 MoaC family RM25_RS10180 PF01967 MoaC family RM25_RS10180 PF00994 Probable molybdopterin binding domain RM25_RS10185 PF01230 HIT domain RM25_RS10190 PF01527 Transposase RM25_RS10195 PF13276 HTH-like domain RM25_RS10195 PF00665 Integrase core domain RM25_RS10205 PF01266 FAD dependent oxidoreductase RM25_RS10215 PF00005 ABC transporter RM25_RS10220 PF00497 Bacterial extracellular solute-binding proteins, family 3 RM25_RS10225 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS10235 PF00107 Zinc-binding dehydrogenase RM25_RS10235 PF13823 Alcohol dehydrogenase GroES-associated RM25_RS10235 PF08240 Alcohol dehydrogenase GroES-like domain RM25_RS10240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RM25_RS10240 PF01842 ACT domain RM25_RS10240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RM25_RS10245 PF00202 Aminotransferase class-III RM25_RS10260 PF00672 HAMP domain RM25_RS10260 PF07730 Histidine kinase RM25_RS10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM25_RS10265 PF00072 Response regulator receiver domain RM25_RS10265 PF00196 Bacterial regulatory proteins, luxR family RM25_RS10275 PF07690 Major Facilitator Superfamily RM25_RS10280 PF01914 MarC family integral membrane protein RM25_RS10315 PF00437 Type II/IV secretion system protein RM25_RS10335 PF03458 UPF0126 domain RM25_RS10370 PF01022 Bacterial regulatory protein, arsR family RM25_RS10390 PF07690 Major Facilitator Superfamily RM25_RS10400 PF14572 Phosphoribosyl synthetase-associated domain RM25_RS10400 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RM25_RS10410 PF02585 GlcNAc-PI de-N-acetylase RM25_RS10415 PF13439 Glycosyltransferase Family 4 RM25_RS10415 PF00534 Glycosyl transferases group 1 RM25_RS10445 PF01263 Aldose 1-epimerase RM25_RS10450 PF00005 ABC transporter RM25_RS10450 PF17755 UvrA DNA-binding domain RM25_RS10450 PF17760 UvrA interaction domain RM25_RS10460 PF00456 Transketolase, thiamine diphosphate binding domain RM25_RS10460 PF02780 Transketolase, C-terminal domain RM25_RS10460 PF02779 Transketolase, pyrimidine binding domain RM25_RS10465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RM25_RS10465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RM25_RS10475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RM25_RS10475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RM25_RS10480 PF13344 Haloacid dehalogenase-like hydrolase RM25_RS10490 PF02502 Ribose/Galactose Isomerase RM25_RS10495 PF00106 short chain dehydrogenase RM25_RS10500 PF08220 DeoR-like helix-turn-helix domain RM25_RS10500 PF00455 DeoR C terminal sensor domain RM25_RS10505 PF00121 Triosephosphate isomerase RM25_RS10510 PF02734 DAK2 domain RM25_RS10510 PF02733 Dak1 domain RM25_RS10515 PF07729 FCD domain RM25_RS10515 PF00392 Bacterial regulatory proteins, gntR family RM25_RS10520 PF07690 Major Facilitator Superfamily RM25_RS10525 PF04199 Putative cyclase RM25_RS10540 PF00589 Phage integrase family RM25_RS10540 PF02899 Phage integrase, N-terminal SAM-like domain RM25_RS10550 PF00589 Phage integrase family RM25_RS10550 PF02899 Phage integrase, N-terminal SAM-like domain RM25_RS10570 PF00128 Alpha amylase, catalytic domain RM25_RS10570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RM25_RS10595 PF00239 Resolvase, N terminal domain RM25_RS10595 PF02796 Helix-turn-helix domain of resolvase RM25_RS10610 PF00011 Hsp20/alpha crystallin family RM25_RS10615 PF00665 Integrase core domain RM25_RS10620 PF00011 Hsp20/alpha crystallin family RM25_RS10625 PF02705 K+ potassium transporter RM25_RS10645 PF00665 Integrase core domain RM25_RS10645 PF13936 Helix-turn-helix domain RM25_RS10650 PF01527 Transposase RM25_RS10665 PF00589 Phage integrase family RM25_RS10665 PF02899 Phage integrase, N-terminal SAM-like domain RM25_RS10690 PF00665 Integrase core domain RM25_RS10690 PF13276 HTH-like domain RM25_RS10690 PF13333 Integrase core domain RM25_RS10715 PF01145 SPFH domain / Band 7 family RM25_RS10735 PF13276 HTH-like domain RM25_RS10735 PF00665 Integrase core domain RM25_RS10740 PF13936 Helix-turn-helix domain RM25_RS10740 PF00665 Integrase core domain RM25_RS10745 PF00665 Integrase core domain RM25_RS10745 PF13276 HTH-like domain RM25_RS10745 PF13333 Integrase core domain RM25_RS10750 PF01527 Transposase RM25_RS10765 PF03631 Virulence factor BrkB RM25_RS10780 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM25_RS10780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RM25_RS10785 PF00665 Integrase core domain RM25_RS10795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RM25_RS10795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RM25_RS10800 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RM25_RS10805 PF01451 Low molecular weight phosphotyrosine protein phosphatase RM25_RS10810 PF03575 Peptidase family S51 RM25_RS10815 PF00486 Transcriptional regulatory protein, C terminal RM25_RS10815 PF00072 Response regulator receiver domain RM25_RS10820 PF00512 His Kinase A (phospho-acceptor) domain RM25_RS10820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM25_RS10820 PF00672 HAMP domain RM25_RS10835 PF08220 DeoR-like helix-turn-helix domain RM25_RS10835 PF00455 DeoR C terminal sensor domain RM25_RS10840 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RM25_RS10840 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RM25_RS10845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RM25_RS10845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RM25_RS10850 PF04055 Radical SAM superfamily RM25_RS10850 PF13186 Iron-sulfur cluster-binding domain RM25_RS10855 PF09084 NMT1/THI5 like RM25_RS10870 PF00005 ABC transporter RM25_RS10875 PF16385 Domain of unknown function RM25_RS10875 PF00884 Sulfatase RM25_RS10880 PF14863 Alkyl sulfatase dimerisation RM25_RS10880 PF14864 Alkyl sulfatase C-terminal RM25_RS10880 PF00753 Metallo-beta-lactamase superfamily RM25_RS10890 PF07690 Major Facilitator Superfamily RM25_RS10905 PF01261 Xylose isomerase-like TIM barrel RM25_RS10910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RM25_RS10910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RM25_RS10915 PF01261 Xylose isomerase-like TIM barrel RM25_RS10920 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RM25_RS10920 PF00356 Bacterial regulatory proteins, lacI family RM25_RS10935 PF03009 Glycerophosphoryl diester phosphodiesterase family RM25_RS10945 PF00005 ABC transporter RM25_RS10945 PF08021 Siderophore-interacting FAD-binding domain RM25_RS10945 PF00664 ABC transporter transmembrane region RM25_RS10945 PF04954 Siderophore-interacting protein RM25_RS10950 PF01261 Xylose isomerase-like TIM barrel RM25_RS10955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RM25_RS10955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RM25_RS10960 PF00356 Bacterial regulatory proteins, lacI family RM25_RS10965 PF00581 Rhodanese-like domain RM25_RS10970 PF00282 Pyridoxal-dependent decarboxylase conserved domain RM25_RS10975 PF13520 Amino acid permease RM25_RS11000 PF00106 short chain dehydrogenase RM25_RS11010 PF00005 ABC transporter RM25_RS11010 PF00571 CBS domain RM25_RS11020 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS11025 PF00107 Zinc-binding dehydrogenase RM25_RS11025 PF08240 Alcohol dehydrogenase GroES-like domain RM25_RS11030 PF00155 Aminotransferase class I and II RM25_RS11055 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS11060 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS11070 PF07690 Major Facilitator Superfamily RM25_RS11075 PF01281 Ribosomal protein L9, N-terminal domain RM25_RS11075 PF03948 Ribosomal protein L9, C-terminal domain RM25_RS11080 PF01084 Ribosomal protein S18 RM25_RS11085 PF00436 Single-strand binding protein family RM25_RS11090 PF01250 Ribosomal protein S6 RM25_RS11105 PF06778 Chlorite dismutase RM25_RS11125 PF00395 S-layer homology domain RM25_RS11125 PF00963 Cohesin domain RM25_RS11135 PF00117 Glutamine amidotransferase class-I RM25_RS11135 PF13673 Acetyltransferase (GNAT) domain RM25_RS11135 PF13302 Acetyltransferase (GNAT) domain RM25_RS11135 PF03352 Methyladenine glycosylase RM25_RS11135 PF00958 GMP synthase C terminal domain RM25_RS11140 PF01139 tRNA-splicing ligase RtcB RM25_RS11145 PF02903 Alpha amylase, N-terminal ig-like domain RM25_RS11145 PF16657 Maltogenic Amylase, C-terminal domain RM25_RS11145 PF00128 Alpha amylase, catalytic domain RM25_RS11160 PF00905 Penicillin binding protein transpeptidase domain RM25_RS11160 PF00912 Transglycosylase RM25_RS11185 PF00210 Ferritin-like domain RM25_RS11190 PF13545 Crp-like helix-turn-helix domain RM25_RS11190 PF00027 Cyclic nucleotide-binding domain RM25_RS11200 PF00403 Heavy-metal-associated domain RM25_RS11210 PF04343 Protein of unknown function, DUF488 RM25_RS11230 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS11250 PF11799 impB/mucB/samB family C-terminal domain RM25_RS11250 PF00817 impB/mucB/samB family RM25_RS11250 PF13438 Domain of unknown function (DUF4113) RM25_RS11265 PF01418 Helix-turn-helix domain, rpiR family RM25_RS11265 PF02685 Glucokinase RM25_RS11265 PF01380 SIS domain RM25_RS11270 PF02558 Ketopantoate reductase PanE/ApbA RM25_RS11270 PF08546 Ketopantoate reductase PanE/ApbA C terminal RM25_RS11285 PF00394 Multicopper oxidase RM25_RS11285 PF07731 Multicopper oxidase RM25_RS11285 PF07732 Multicopper oxidase RM25_RS11290 PF00512 His Kinase A (phospho-acceptor) domain RM25_RS11290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM25_RS11295 PF00072 Response regulator receiver domain RM25_RS11295 PF00486 Transcriptional regulatory protein, C terminal RM25_RS11305 PF01695 IstB-like ATP binding protein RM25_RS11310 PF00665 Integrase core domain RM25_RS11325 PF00291 Pyridoxal-phosphate dependent enzyme RM25_RS11340 PF00665 Integrase core domain RM25_RS11375 PF06772 Bacterial low temperature requirement A protein (LtrA) RM25_RS11385 PF00067 Cytochrome P450 RM25_RS11390 PF00248 Aldo/keto reductase family RM25_RS11400 PF00128 Alpha amylase, catalytic domain RM25_RS11410 PF00860 Permease family RM25_RS11420 PF13193 AMP-binding enzyme C-terminal domain RM25_RS11420 PF00501 AMP-binding enzyme RM25_RS11425 PF00199 Catalase RM25_RS11425 PF06628 Catalase-related immune-responsive RM25_RS11430 PF04261 Dyp-type peroxidase family RM25_RS11435 PF03109 ABC1 family RM25_RS11465 PF00274 Fructose-bisphosphate aldolase class-I RM25_RS11470 PF04264 YceI-like domain RM25_RS11475 PF00285 Citrate synthase, C-terminal domain RM25_RS11480 PF00248 Aldo/keto reductase family RM25_RS11495 PF03176 MMPL family RM25_RS11520 PF00005 ABC transporter RM25_RS11525 PF01032 FecCD transport family RM25_RS11540 PF01743 Poly A polymerase head domain RM25_RS11540 PF13735 tRNA nucleotidyltransferase domain 2 putative RM25_RS11540 PF12627 Probable RNA and SrmB- binding site of polymerase A RM25_RS11545 PF07690 Major Facilitator Superfamily RM25_RS11570 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM25_RS11575 PF00085 Thioredoxin RM25_RS11585 PF02195 ParB-like nuclease domain RM25_RS11585 PF17762 HTH domain found in ParB protein RM25_RS11590 PF13614 AAA domain RM25_RS11600 PF02527 rRNA small subunit methyltransferase G RM25_RS11610 PF02096 60Kd inner membrane protein RM25_RS11615 PF01809 Putative membrane protein insertion efficiency factor RM25_RS11620 PF00825 Ribonuclease P RM25_RS11630 PF00535 Glycosyl transferase family 2 RM25_RS11635 PF00756 Putative esterase RM25_RS11635 PF08310 LGFP repeat RM25_RS11640 PF00535 Glycosyl transferase family 2 RM25_RS11715 PF12169 DNA polymerase III subunits gamma and tau domain III RM25_RS11735 PF00877 NlpC/P60 family RM25_RS11740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RM25_RS11740 PF08447 PAS fold RM25_RS11775 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RM25_RS11785 PF00270 DEAD/DEAH box helicase RM25_RS11785 PF00271 Helicase conserved C-terminal domain RM25_RS11790 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RM25_RS11800 PF16859 Tetracyclin repressor-like, C-terminal domain RM25_RS11800 PF00440 Bacterial regulatory proteins, tetR family RM25_RS11815 PF10531 SLBB domain RM25_RS11820 PF10114 Sensory domain found in PocR RM25_RS11820 PF12833 Helix-turn-helix domain RM25_RS11825 PF00583 Acetyltransferase (GNAT) family RM25_RS11830 PF00140 Sigma-70 factor, region 1.2 RM25_RS11830 PF04542 Sigma-70 region 2 RM25_RS11830 PF04539 Sigma-70 region 3 RM25_RS11830 PF04545 Sigma-70, region 4 RM25_RS11860 PF02699 Preprotein translocase subunit RM25_RS11890 PF02416 mttA/Hcf106 family RM25_RS11900 PF10145 Phage-related minor tail protein RM25_RS11900 PF01464 Transglycosylase SLT domain RM25_RS11900 PF01551 Peptidase family M23 RM25_RS11905 PF00886 Ribosomal protein S16 RM25_RS11940 PF00781 Diacylglycerol kinase catalytic domain RM25_RS11965 PF00395 S-layer homology domain RM25_RS11965 PF00963 Cohesin domain RM25_RS11975 PF06452 Carbohydrate family 9 binding domain-like RM25_RS11975 PF02018 Carbohydrate binding domain RM25_RS11975 PF00331 Glycosyl hydrolase family 10 RM25_RS11975 PF00395 S-layer homology domain RM25_RS11985 PF00440 Bacterial regulatory proteins, tetR family RM25_RS11985 PF16859 Tetracyclin repressor-like, C-terminal domain RM25_RS11995 PF00069 Protein kinase domain RM25_RS11995 PF03793 PASTA domain RM25_RS12025 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RM25_RS12025 PF00925 GTP cyclohydrolase II RM25_RS12035 PF04055 Radical SAM superfamily RM25_RS12035 PF06463 Molybdenum Cofactor Synthesis C RM25_RS12060 PF04909 Amidohydrolase RM25_RS12090 PF00528 Binding-protein-dependent transport system inner membrane component RM25_RS12135 PF00924 Mechanosensitive ion channel RM25_RS12140 PF08450 SMP-30/Gluconolactonase/LRE-like region RM25_RS12140 PF00069 Protein kinase domain RM25_RS12140 PF01436 NHL repeat