RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 SUPERFAMILY SSF52374 410 666 1.07E-121 T 22-04-2016 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 SUPERFAMILY SSF52374 17 211 1.07E-121 T 22-04-2016 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 31 648 6.3E-173 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 4.1E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 408 423 4.1E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 4.1E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 535 548 4.1E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 54 65 4.1E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 Gene3D G3DSA:1.10.730.10 664 842 1.4E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 Gene3D G3DSA:3.90.740.10 216 396 1.2E-51 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 PANTHER PTHR11946 284 953 0.0 T 22-04-2016 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 PANTHER PTHR11946 9 259 0.0 T 22-04-2016 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 18 858 1.4E-264 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 16 1057 13.315 T 22-04-2016 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 Pfam PF08264 Anticodon-binding domain of tRNA 705 850 5.9E-27 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 Gene3D G3DSA:3.40.50.620 18 207 2.3E-132 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 Gene3D G3DSA:3.40.50.620 413 654 2.3E-132 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 SUPERFAMILY SSF47323 673 907 4.86E-47 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 SUPERFAMILY SSF50677 213 410 1.05E-47 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 PANTHER PTHR11946:SF87 284 953 0.0 T 22-04-2016 RM25_RS01760 8ef4343f7c22fa8aac24a6127b354381 1067 PANTHER PTHR11946:SF87 9 259 0.0 T 22-04-2016 RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 9.0E-10 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 PRINTS PR00149 Fumarate lyase superfamily signature 98 116 9.0E-10 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 9.0E-10 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 9.0E-10 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 PANTHER PTHR11444 7 472 1.6E-99 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 SMART SM00998 369 455 2.5E-17 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 SUPERFAMILY SSF48557 6 456 3.61E-80 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 Pfam PF00206 Lyase 28 305 1.4E-21 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 PANTHER PTHR11444:SF2 7 472 1.6E-99 T 22-04-2016 RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 7 454 4.1E-117 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 Gene3D G3DSA:1.20.200.10 102 451 1.3E-76 T 22-04-2016 RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 Gene3D G3DSA:1.10.275.10 9 101 3.1E-21 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RM25_RS01830 3cddddd619a0cbba909ca9c01b50ad13 477 Pfam PF10397 Adenylosuccinate lyase C-terminus 370 453 7.4E-14 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RM25_RS09465 678ddb93e30b1be901fa9aad574351f7 283 SUPERFAMILY SSF51658 15 269 5.5E-48 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS09465 678ddb93e30b1be901fa9aad574351f7 283 Gene3D G3DSA:3.20.20.150 15 261 4.4E-38 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS09465 678ddb93e30b1be901fa9aad574351f7 283 PANTHER PTHR12110:SF17 13 283 1.6E-38 T 22-04-2016 RM25_RS09465 678ddb93e30b1be901fa9aad574351f7 283 Pfam PF01261 Xylose isomerase-like TIM barrel 33 220 1.5E-18 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS09465 678ddb93e30b1be901fa9aad574351f7 283 PANTHER PTHR12110 13 283 1.6E-38 T 22-04-2016 RM25_RS06065 e10263e05f641afe393f8d3b13802832 334 Gene3D G3DSA:3.40.47.10 174 331 4.7E-43 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS06065 e10263e05f641afe393f8d3b13802832 334 PANTHER PTHR18919:SF103 36 334 6.2E-102 T 22-04-2016 RM25_RS06065 e10263e05f641afe393f8d3b13802832 334 SUPERFAMILY SSF53901 11 332 7.9E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS06065 e10263e05f641afe393f8d3b13802832 334 PANTHER PTHR18919 36 334 6.2E-102 T 22-04-2016 RM25_RS06065 e10263e05f641afe393f8d3b13802832 334 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 12 331 9.2E-97 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RM25_RS06065 e10263e05f641afe393f8d3b13802832 334 Gene3D G3DSA:3.40.47.10 11 173 1.5E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS06065 e10263e05f641afe393f8d3b13802832 334 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 244 331 6.9E-28 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RM25_RS06065 e10263e05f641afe393f8d3b13802832 334 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 116 194 2.5E-22 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RM25_RS05445 1258cfd7752d76d3e5b1e183ec0f5484 347 PANTHER PTHR11933:SF10 1 332 1.3E-114 T 22-04-2016 RM25_RS05445 1258cfd7752d76d3e5b1e183ec0f5484 347 SUPERFAMILY SSF52402 1 222 1.02E-38 T 22-04-2016 RM25_RS05445 1258cfd7752d76d3e5b1e183ec0f5484 347 Gene3D G3DSA:2.40.30.10 275 334 4.8E-15 T 22-04-2016 RM25_RS05445 1258cfd7752d76d3e5b1e183ec0f5484 347 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 332 4.5E-76 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RM25_RS05445 1258cfd7752d76d3e5b1e183ec0f5484 347 PANTHER PTHR11933 1 332 1.3E-114 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RM25_RS05445 1258cfd7752d76d3e5b1e183ec0f5484 347 Gene3D G3DSA:2.30.30.280 192 255 1.7E-18 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 RM25_RS05445 1258cfd7752d76d3e5b1e183ec0f5484 347 Pfam PF03054 tRNA methyl transferase 1 332 1.8E-92 T 22-04-2016 RM25_RS05445 1258cfd7752d76d3e5b1e183ec0f5484 347 Gene3D G3DSA:3.40.50.620 1 189 8.0E-60 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 SUPERFAMILY SSF47323 423 544 1.7E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 11 81 2.2E-21 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 117 128 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 Pfam PF00750 tRNA synthetases class I (R) 107 391 4.5E-96 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 PRINTS PR01038 Arginyl-tRNA synthetase signature 291 312 1.1E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 PRINTS PR01038 Arginyl-tRNA synthetase signature 148 161 1.1E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 PRINTS PR01038 Arginyl-tRNA synthetase signature 109 124 1.1E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 140 1.1E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 SMART SM01016 2 81 3.1E-28 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 16 544 1.3E-141 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 PANTHER PTHR11956 1 544 1.4E-206 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 SUPERFAMILY SSF52374 107 419 2.44E-76 T 22-04-2016 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 Gene3D G3DSA:3.40.50.620 107 427 2.8E-96 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 Gene3D G3DSA:1.10.730.10 428 544 2.4E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 Gene3D G3DSA:3.30.1360.70 12 99 6.1E-26 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 SMART SM00836 429 544 3.4E-42 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 Hamap MF_00123 Arginine--tRNA ligase [argS]. 2 544 25.638 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 SUPERFAMILY SSF55190 16 93 2.22E-21 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RM25_RS01155 4bdd67aec0d359ce4a405cd19a2aff00 544 Pfam PF05746 DALR anticodon binding domain 429 544 2.0E-36 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RM25_RS07725 1e3563aebbfff9f8aa3b2bc46208b809 297 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 151 269 1.6E-33 T 22-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase RM25_RS07725 1e3563aebbfff9f8aa3b2bc46208b809 297 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 137 2.4E-26 T 22-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase RM25_RS07725 1e3563aebbfff9f8aa3b2bc46208b809 297 SUPERFAMILY SSF54593 5 140 2.59E-26 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RM25_RS07725 1e3563aebbfff9f8aa3b2bc46208b809 297 PANTHER PTHR33990 150 296 2.4E-33 T 22-04-2016 RM25_RS07725 1e3563aebbfff9f8aa3b2bc46208b809 297 Gene3D G3DSA:3.10.180.10 1 142 1.1E-38 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RM25_RS07725 1e3563aebbfff9f8aa3b2bc46208b809 297 Gene3D G3DSA:3.10.180.10 148 280 7.6E-38 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RM25_RS07725 1e3563aebbfff9f8aa3b2bc46208b809 297 PANTHER PTHR33990:SF2 150 296 2.4E-33 T 22-04-2016 RM25_RS07725 1e3563aebbfff9f8aa3b2bc46208b809 297 SUPERFAMILY SSF54593 161 296 9.0E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RM25_RS08150 970b05ba9479c8c79488de109e2d2ea2 515 PANTHER PTHR22572:SF115 24 471 6.7E-190 T 22-04-2016 RM25_RS08150 970b05ba9479c8c79488de109e2d2ea2 515 PANTHER PTHR22572 24 471 6.7E-190 T 22-04-2016 RM25_RS08150 970b05ba9479c8c79488de109e2d2ea2 515 SUPERFAMILY SSF51161 243 460 2.06E-39 T 22-04-2016 IPR011004 Trimeric LpxA-like RM25_RS08150 970b05ba9479c8c79488de109e2d2ea2 515 Gene3D G3DSA:2.160.10.10 278 460 1.5E-40 T 22-04-2016 RM25_RS08150 970b05ba9479c8c79488de109e2d2ea2 515 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 425 453 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RM25_RS08150 970b05ba9479c8c79488de109e2d2ea2 515 Gene3D G3DSA:3.90.550.10 22 273 2.1E-76 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS08150 970b05ba9479c8c79488de109e2d2ea2 515 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 417 449 1.3E-5 T 22-04-2016 IPR001451 Hexapeptide repeat RM25_RS08150 970b05ba9479c8c79488de109e2d2ea2 515 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 22 474 37.776 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 RM25_RS08150 970b05ba9479c8c79488de109e2d2ea2 515 Pfam PF00483 Nucleotidyl transferase 26 245 3.7E-22 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RM25_RS08150 970b05ba9479c8c79488de109e2d2ea2 515 SUPERFAMILY SSF53448 25 275 1.15E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS08150 970b05ba9479c8c79488de109e2d2ea2 515 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 24 474 4.6E-166 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 RM25_RS11340 881b5b1ecea8e586075a4c36f20ca300 333 Gene3D G3DSA:3.30.420.10 130 158 1.2E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS11340 881b5b1ecea8e586075a4c36f20ca300 333 Gene3D G3DSA:3.30.420.10 190 321 1.2E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS11340 881b5b1ecea8e586075a4c36f20ca300 333 SUPERFAMILY SSF46689 4 107 3.23E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS11340 881b5b1ecea8e586075a4c36f20ca300 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 78 2.3E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS11340 881b5b1ecea8e586075a4c36f20ca300 333 SUPERFAMILY SSF53098 137 148 3.67E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS11340 881b5b1ecea8e586075a4c36f20ca300 333 SUPERFAMILY SSF53098 187 328 3.67E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS11340 881b5b1ecea8e586075a4c36f20ca300 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS11340 881b5b1ecea8e586075a4c36f20ca300 333 Pfam PF00665 Integrase core domain 136 284 1.8E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS11340 881b5b1ecea8e586075a4c36f20ca300 333 PANTHER PTHR24559 183 316 4.7E-16 T 22-04-2016 RM25_RS11340 881b5b1ecea8e586075a4c36f20ca300 333 PANTHER PTHR24559 125 149 4.7E-16 T 22-04-2016 RM25_RS10785 881b5b1ecea8e586075a4c36f20ca300 333 Gene3D G3DSA:3.30.420.10 130 158 1.2E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10785 881b5b1ecea8e586075a4c36f20ca300 333 Gene3D G3DSA:3.30.420.10 190 321 1.2E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10785 881b5b1ecea8e586075a4c36f20ca300 333 SUPERFAMILY SSF46689 4 107 3.23E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10785 881b5b1ecea8e586075a4c36f20ca300 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 78 2.3E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS10785 881b5b1ecea8e586075a4c36f20ca300 333 SUPERFAMILY SSF53098 137 148 3.67E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10785 881b5b1ecea8e586075a4c36f20ca300 333 SUPERFAMILY SSF53098 187 328 3.67E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10785 881b5b1ecea8e586075a4c36f20ca300 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10785 881b5b1ecea8e586075a4c36f20ca300 333 Pfam PF00665 Integrase core domain 136 284 1.8E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS10785 881b5b1ecea8e586075a4c36f20ca300 333 PANTHER PTHR24559 183 316 4.7E-16 T 22-04-2016 RM25_RS10785 881b5b1ecea8e586075a4c36f20ca300 333 PANTHER PTHR24559 125 149 4.7E-16 T 22-04-2016 RM25_RS03725 881b5b1ecea8e586075a4c36f20ca300 333 Gene3D G3DSA:3.30.420.10 130 158 1.2E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03725 881b5b1ecea8e586075a4c36f20ca300 333 Gene3D G3DSA:3.30.420.10 190 321 1.2E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03725 881b5b1ecea8e586075a4c36f20ca300 333 SUPERFAMILY SSF46689 4 107 3.23E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS03725 881b5b1ecea8e586075a4c36f20ca300 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 78 2.3E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS03725 881b5b1ecea8e586075a4c36f20ca300 333 SUPERFAMILY SSF53098 137 148 3.67E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03725 881b5b1ecea8e586075a4c36f20ca300 333 SUPERFAMILY SSF53098 187 328 3.67E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03725 881b5b1ecea8e586075a4c36f20ca300 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03725 881b5b1ecea8e586075a4c36f20ca300 333 Pfam PF00665 Integrase core domain 136 284 1.8E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS03725 881b5b1ecea8e586075a4c36f20ca300 333 PANTHER PTHR24559 183 316 4.7E-16 T 22-04-2016 RM25_RS03725 881b5b1ecea8e586075a4c36f20ca300 333 PANTHER PTHR24559 125 149 4.7E-16 T 22-04-2016 RM25_RS08300 979c3ee11afd907eb8216b718ae5e074 219 SMART SM00448 2 117 2.6E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS08300 979c3ee11afd907eb8216b718ae5e074 219 SUPERFAMILY SSF52172 1 177 5.89E-34 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS08300 979c3ee11afd907eb8216b718ae5e074 219 Pfam PF00072 Response regulator receiver domain 4 117 1.7E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS08300 979c3ee11afd907eb8216b718ae5e074 219 SMART SM00421 155 212 1.1E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS08300 979c3ee11afd907eb8216b718ae5e074 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS08300 979c3ee11afd907eb8216b718ae5e074 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS08300 979c3ee11afd907eb8216b718ae5e074 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS08300 979c3ee11afd907eb8216b718ae5e074 219 PANTHER PTHR26402:SF151 2 218 1.7E-72 T 22-04-2016 RM25_RS08300 979c3ee11afd907eb8216b718ae5e074 219 Gene3D G3DSA:3.40.50.2300 1 156 1.2E-36 T 22-04-2016 RM25_RS08300 979c3ee11afd907eb8216b718ae5e074 219 PANTHER PTHR26402 2 218 1.7E-72 T 22-04-2016 RM25_RS08300 979c3ee11afd907eb8216b718ae5e074 219 Gene3D G3DSA:1.10.10.10 157 216 2.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08300 979c3ee11afd907eb8216b718ae5e074 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 212 3.0E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS05400 e1c5331fde792c9faf71e9d8629a9964 377 Pfam PF01321 Creatinase/Prolidase N-terminal domain 18 149 1.9E-14 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 RM25_RS05400 e1c5331fde792c9faf71e9d8629a9964 377 Gene3D G3DSA:3.90.230.10 149 372 1.8E-66 T 22-04-2016 IPR000994 Peptidase M24, structural domain RM25_RS05400 e1c5331fde792c9faf71e9d8629a9964 377 SUPERFAMILY SSF53092 6 147 1.59E-20 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal RM25_RS05400 e1c5331fde792c9faf71e9d8629a9964 377 SUPERFAMILY SSF55920 149 372 2.49E-65 T 22-04-2016 IPR000994 Peptidase M24, structural domain RM25_RS05400 e1c5331fde792c9faf71e9d8629a9964 377 PANTHER PTHR10804 14 28 6.9E-69 T 22-04-2016 RM25_RS05400 e1c5331fde792c9faf71e9d8629a9964 377 PANTHER PTHR10804 130 373 6.9E-69 T 22-04-2016 RM25_RS05400 e1c5331fde792c9faf71e9d8629a9964 377 Pfam PF00557 Metallopeptidase family M24 160 358 2.3E-55 T 22-04-2016 IPR000994 Peptidase M24, structural domain RM25_RS05400 e1c5331fde792c9faf71e9d8629a9964 377 Gene3D G3DSA:3.40.350.10 8 147 1.2E-18 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RM25_RS05400 e1c5331fde792c9faf71e9d8629a9964 377 PANTHER PTHR10804:SF110 14 28 6.9E-69 T 22-04-2016 RM25_RS05400 e1c5331fde792c9faf71e9d8629a9964 377 PANTHER PTHR10804:SF110 130 373 6.9E-69 T 22-04-2016 RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 Pfam PF17191 RecG wedge domain 22 144 5.2E-7 T 22-04-2016 IPR033454 RecG, wedge domain RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 SMART SM00487 284 486 2.8E-23 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 SUPERFAMILY SSF50249 22 190 1.71E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 PANTHER PTHR24031 318 639 1.6E-82 T 22-04-2016 RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 PANTHER PTHR24031:SF249 318 639 1.6E-82 T 22-04-2016 RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 PANTHER PTHR24031:SF249 288 301 1.6E-82 T 22-04-2016 RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 Gene3D G3DSA:3.40.50.300 493 672 1.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 PANTHER PTHR24031 288 301 1.6E-82 T 22-04-2016 RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 SUPERFAMILY SSF52540 204 479 8.13E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 PANTHER PTHR24031:SF249 710 724 1.6E-82 T 22-04-2016 RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 Pfam PF00270 DEAD/DEAH box helicase 312 461 2.6E-14 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 Gene3D G3DSA:2.40.50.140 52 149 1.2E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 PANTHER PTHR24031 710 724 1.6E-82 T 22-04-2016 RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 Pfam PF00271 Helicase conserved C-terminal domain 506 623 3.1E-18 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 SMART SM00490 539 624 9.0E-19 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 Gene3D G3DSA:3.40.50.300 275 482 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06760 d7c4399538bee16cb82ebf5a628f5f8b 735 SUPERFAMILY SSF52540 418 633 6.63E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06690 577d8ebf168f448243a4cfd1f482ff5d 163 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 22.04 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06690 577d8ebf168f448243a4cfd1f482ff5d 163 PANTHER PTHR12919 2 139 1.1E-34 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06690 577d8ebf168f448243a4cfd1f482ff5d 163 Pfam PF00886 Ribosomal protein S16 10 67 2.6E-20 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06690 577d8ebf168f448243a4cfd1f482ff5d 163 TIGRFAM TIGR00002 S16: ribosomal protein bS16 4 79 5.9E-29 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06690 577d8ebf168f448243a4cfd1f482ff5d 163 SUPERFAMILY SSF54565 3 87 1.83E-29 T 22-04-2016 IPR023803 Ribosomal protein S16 domain RM25_RS06690 577d8ebf168f448243a4cfd1f482ff5d 163 PANTHER PTHR12919:SF20 2 139 1.1E-34 T 22-04-2016 RM25_RS06690 577d8ebf168f448243a4cfd1f482ff5d 163 Gene3D G3DSA:3.30.1320.10 3 83 1.3E-28 T 22-04-2016 IPR023803 Ribosomal protein S16 domain RM25_RS06285 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF01610 Transposase 168 423 3.8E-63 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS06285 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498:SF1 50 438 4.8E-31 T 22-04-2016 RM25_RS06285 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 49 92 3.5E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS06285 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498 50 438 4.8E-31 T 22-04-2016 RM25_RS08235 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF01610 Transposase 168 423 3.8E-63 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS08235 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498:SF1 50 438 4.8E-31 T 22-04-2016 RM25_RS08235 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 49 92 3.5E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS08235 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498 50 438 4.8E-31 T 22-04-2016 RM25_RS01610 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF01610 Transposase 168 423 3.8E-63 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS01610 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498:SF1 50 438 4.8E-31 T 22-04-2016 RM25_RS01610 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 49 92 3.5E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS01610 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498 50 438 4.8E-31 T 22-04-2016 RM25_RS10330 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF01610 Transposase 168 423 3.8E-63 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS10330 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498:SF1 50 438 4.8E-31 T 22-04-2016 RM25_RS10330 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 49 92 3.5E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS10330 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498 50 438 4.8E-31 T 22-04-2016 RM25_RS08800 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF01610 Transposase 168 423 3.8E-63 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS08800 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498:SF1 50 438 4.8E-31 T 22-04-2016 RM25_RS08800 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 49 92 3.5E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS08800 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498 50 438 4.8E-31 T 22-04-2016 RM25_RS03260 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF01610 Transposase 168 423 3.8E-63 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS03260 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498:SF1 50 438 4.8E-31 T 22-04-2016 RM25_RS03260 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 49 92 3.5E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS03260 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498 50 438 4.8E-31 T 22-04-2016 RM25_RS03280 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF01610 Transposase 168 423 3.8E-63 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS03280 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498:SF1 50 438 4.8E-31 T 22-04-2016 RM25_RS03280 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 49 92 3.5E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS03280 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498 50 438 4.8E-31 T 22-04-2016 RM25_RS04065 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF01610 Transposase 168 423 3.8E-63 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS04065 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498:SF1 50 438 4.8E-31 T 22-04-2016 RM25_RS04065 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 49 92 3.5E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS04065 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498 50 438 4.8E-31 T 22-04-2016 RM25_RS03355 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF01610 Transposase 168 423 3.8E-63 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS03355 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498:SF1 50 438 4.8E-31 T 22-04-2016 RM25_RS03355 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 49 92 3.5E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS03355 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498 50 438 4.8E-31 T 22-04-2016 RM25_RS04785 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF01610 Transposase 168 423 3.8E-63 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS04785 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498:SF1 50 438 4.8E-31 T 22-04-2016 RM25_RS04785 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 49 92 3.5E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS04785 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498 50 438 4.8E-31 T 22-04-2016 RM25_RS00445 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF01610 Transposase 168 423 3.8E-63 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS00445 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498:SF1 50 438 4.8E-31 T 22-04-2016 RM25_RS00445 86b3d01a35dc56688ecfd6b536e4733b 441 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 49 92 3.5E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS00445 86b3d01a35dc56688ecfd6b536e4733b 441 PANTHER PTHR33498 50 438 4.8E-31 T 22-04-2016 RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 Pfam PF13307 Helicase C-terminal domain 507 665 1.4E-28 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 SUPERFAMILY SSF52540 476 644 8.55E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 SUPERFAMILY SSF52540 215 286 8.55E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 SUPERFAMILY SSF52540 416 430 8.55E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 SUPERFAMILY SSF52540 51 102 8.55E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 PANTHER PTHR11472:SF37 35 438 5.4E-138 T 22-04-2016 RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 PANTHER PTHR11472:SF37 457 671 5.4E-138 T 22-04-2016 RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 Gene3D G3DSA:3.40.50.300 215 278 1.9E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 Gene3D G3DSA:3.40.50.300 22 113 1.9E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 SUPERFAMILY SSF52540 227 269 8.57E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 PANTHER PTHR11472 35 438 5.4E-138 T 22-04-2016 RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 PANTHER PTHR11472 457 671 5.4E-138 T 22-04-2016 RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 SMART SM00491 520 653 2.3E-35 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RM25_RS04370 2056df21a81bebb79cd30f901f81b671 687 SUPERFAMILY SSF52540 13 130 8.57E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05510 dcad6e862e1d8122d389b535b8c7dbe5 330 Gene3D G3DSA:1.25.40.10 247 330 6.1E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RM25_RS05510 dcad6e862e1d8122d389b535b8c7dbe5 330 PANTHER PTHR10438 291 312 1.1E-13 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RM25_RS05510 dcad6e862e1d8122d389b535b8c7dbe5 330 PANTHER PTHR10438 66 174 1.1E-13 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RM25_RS05510 dcad6e862e1d8122d389b535b8c7dbe5 330 Pfam PF14561 Tetratricopeptide repeat 242 330 2.1E-19 T 22-04-2016 RM25_RS05510 dcad6e862e1d8122d389b535b8c7dbe5 330 SUPERFAMILY SSF52833 66 172 4.75E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS05510 dcad6e862e1d8122d389b535b8c7dbe5 330 PANTHER PTHR10438:SF282 291 312 1.1E-13 T 22-04-2016 RM25_RS05510 dcad6e862e1d8122d389b535b8c7dbe5 330 PANTHER PTHR10438:SF282 66 174 1.1E-13 T 22-04-2016 RM25_RS05510 dcad6e862e1d8122d389b535b8c7dbe5 330 Gene3D G3DSA:3.40.30.10 71 171 7.3E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 PANTHER PTHR11911:SF6 310 503 4.8E-223 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 PANTHER PTHR11911:SF6 18 292 4.8E-223 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 18 491 2.8E-158 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 SMART SM01240 17 491 0.0 T 22-04-2016 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 PIRSF PIRSF000130 10 506 1.1E-202 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 Pfam PF00571 CBS domain 106 149 3.2E-6 T 22-04-2016 IPR000644 CBS domain RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 Pfam PF00571 CBS domain 159 212 1.0E-5 T 22-04-2016 IPR000644 CBS domain RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 PANTHER PTHR11911 310 503 4.8E-223 T 22-04-2016 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 PANTHER PTHR11911 18 292 4.8E-223 T 22-04-2016 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 306 318 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 18 472 8.9E-182 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 SUPERFAMILY SSF54631 103 212 2.15E-28 T 22-04-2016 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 18 504 83.847 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 SMART SM00116 106 154 1.3E-4 T 22-04-2016 IPR000644 CBS domain RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 SMART SM00116 167 215 1.0E-4 T 22-04-2016 IPR000644 CBS domain RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 SUPERFAMILY SSF51412 226 495 1.14E-117 T 22-04-2016 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 SUPERFAMILY SSF51412 15 100 1.14E-117 T 22-04-2016 RM25_RS02995 71df2c28df56ba2f0d661985af624b79 506 Gene3D G3DSA:3.20.20.70 17 503 3.4E-193 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS09030 144f48f44c4ebdf7f1c67a972ceaee22 663 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 15 607 2.6E-233 T 22-04-2016 IPR004814 Oligopeptide transporter OPT RM25_RS09030 144f48f44c4ebdf7f1c67a972ceaee22 663 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 13 605 1.2E-112 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 RM25_RS09030 144f48f44c4ebdf7f1c67a972ceaee22 663 Pfam PF03169 OPT oligopeptide transporter protein 15 606 3.3E-99 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 RM25_RS09030 144f48f44c4ebdf7f1c67a972ceaee22 663 PANTHER PTHR31645 14 606 1.6E-133 T 22-04-2016 RM25_RS09030 144f48f44c4ebdf7f1c67a972ceaee22 663 PANTHER PTHR31645:SF0 14 606 1.6E-133 T 22-04-2016 RM25_RS07530 94c70b733d9d7276c858e474873c7eb6 481 SMART SM01011 42 179 1.2E-25 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RM25_RS07530 94c70b733d9d7276c858e474873c7eb6 481 Gene3D G3DSA:3.40.350.10 45 212 8.7E-32 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RM25_RS07530 94c70b733d9d7276c858e474873c7eb6 481 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 388 400 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RM25_RS07530 94c70b733d9d7276c858e474873c7eb6 481 SUPERFAMILY SSF53092 46 208 8.37E-23 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal RM25_RS07530 94c70b733d9d7276c858e474873c7eb6 481 SUPERFAMILY SSF55920 209 476 3.66E-65 T 22-04-2016 IPR000994 Peptidase M24, structural domain RM25_RS07530 94c70b733d9d7276c858e474873c7eb6 481 Pfam PF05195 Aminopeptidase P, N-terminal domain 46 161 2.3E-16 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RM25_RS07530 94c70b733d9d7276c858e474873c7eb6 481 PANTHER PTHR10804:SF17 48 476 2.5E-93 T 22-04-2016 RM25_RS07530 94c70b733d9d7276c858e474873c7eb6 481 Pfam PF00557 Metallopeptidase family M24 215 454 2.6E-52 T 22-04-2016 IPR000994 Peptidase M24, structural domain RM25_RS07530 94c70b733d9d7276c858e474873c7eb6 481 PANTHER PTHR10804 48 476 2.5E-93 T 22-04-2016 RM25_RS07530 94c70b733d9d7276c858e474873c7eb6 481 Gene3D G3DSA:3.90.230.10 213 474 3.0E-65 T 22-04-2016 IPR000994 Peptidase M24, structural domain RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 SUPERFAMILY SSF50447 233 326 5.42E-15 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 Pfam PF00009 Elongation factor Tu GTP binding domain 21 222 1.9E-39 T 22-04-2016 RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 PANTHER PTHR23115 9 338 6.5E-61 T 22-04-2016 RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 SUPERFAMILY SSF52540 20 225 1.61E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 SUPERFAMILY SSF50465 330 432 5.4E-28 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 74 89 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 Gene3D G3DSA:2.40.30.10 233 363 1.0E-22 T 22-04-2016 RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 PRINTS PR00315 GTP-binding elongation factor signature 117 128 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 PRINTS PR00315 GTP-binding elongation factor signature 81 89 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 PRINTS PR00315 GTP-binding elongation factor signature 101 111 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 PRINTS PR00315 GTP-binding elongation factor signature 22 35 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 PRINTS PR00315 GTP-binding elongation factor signature 154 163 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 21 431 4.9E-151 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RM25_RS10060 0d64e7585ef4c31532f25bf0a32ce742 449 Gene3D G3DSA:3.40.50.300 17 225 2.7E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03785 42e2ce8ddac6934f079407ef02a1edc1 273 Pfam PF08543 Phosphomethylpyrimidine kinase 13 252 1.6E-61 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 RM25_RS03785 42e2ce8ddac6934f079407ef02a1edc1 273 Gene3D G3DSA:3.40.1190.20 3 251 1.3E-63 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS03785 42e2ce8ddac6934f079407ef02a1edc1 273 PANTHER PTHR20858 5 250 1.6E-74 T 22-04-2016 RM25_RS03785 42e2ce8ddac6934f079407ef02a1edc1 273 SUPERFAMILY SSF53613 3 264 2.03E-55 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS03785 42e2ce8ddac6934f079407ef02a1edc1 273 PANTHER PTHR20858:SF19 5 250 1.6E-74 T 22-04-2016 RM25_RS02785 a0124976fdc905ba9a9f914bb28fcadc 201 PANTHER PTHR11831 1 201 5.2E-80 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 RM25_RS02785 a0124976fdc905ba9a9f914bb28fcadc 201 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 90 3.0E-26 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RM25_RS02785 a0124976fdc905ba9a9f914bb28fcadc 201 SUPERFAMILY SSF55174 3 201 1.15E-68 T 22-04-2016 RM25_RS02785 a0124976fdc905ba9a9f914bb28fcadc 201 Pfam PF01479 S4 domain 92 138 2.0E-22 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS02785 a0124976fdc905ba9a9f914bb28fcadc 201 PANTHER PTHR11831:SF4 1 201 5.2E-80 T 22-04-2016 RM25_RS02785 a0124976fdc905ba9a9f914bb28fcadc 201 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 35.226 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RM25_RS02785 a0124976fdc905ba9a9f914bb28fcadc 201 Gene3D G3DSA:1.10.1050.10 1 97 1.5E-38 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RM25_RS02785 a0124976fdc905ba9a9f914bb28fcadc 201 ProSitePatterns PS00632 Ribosomal protein S4 signature. 89 113 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 RM25_RS02785 a0124976fdc905ba9a9f914bb28fcadc 201 SMART SM00363 91 153 3.0E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS02785 a0124976fdc905ba9a9f914bb28fcadc 201 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 1.2E-78 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RM25_RS02785 a0124976fdc905ba9a9f914bb28fcadc 201 SMART SM01390 3 90 2.4E-43 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RM25_RS02785 a0124976fdc905ba9a9f914bb28fcadc 201 Gene3D G3DSA:3.10.290.10 98 186 3.1E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS05480 66ddf08d6e5eaedb6f6093d0a3bf9c63 704 PANTHER PTHR10357:SF137 58 182 3.4E-208 T 22-04-2016 RM25_RS05480 66ddf08d6e5eaedb6f6093d0a3bf9c63 704 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 55 703 42.581 T 22-04-2016 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 RM25_RS05480 66ddf08d6e5eaedb6f6093d0a3bf9c63 704 Pfam PF11896 Domain of unknown function (DUF3416) 57 246 3.0E-46 T 22-04-2016 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 RM25_RS05480 66ddf08d6e5eaedb6f6093d0a3bf9c63 704 PANTHER PTHR10357:SF137 219 698 3.4E-208 T 22-04-2016 RM25_RS05480 66ddf08d6e5eaedb6f6093d0a3bf9c63 704 SMART SM00642 261 604 7.0E-4 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS05480 66ddf08d6e5eaedb6f6093d0a3bf9c63 704 Gene3D G3DSA:2.60.40.1180 609 649 1.2E-5 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta RM25_RS05480 66ddf08d6e5eaedb6f6093d0a3bf9c63 704 Gene3D G3DSA:3.20.20.80 249 608 9.8E-60 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS05480 66ddf08d6e5eaedb6f6093d0a3bf9c63 704 SUPERFAMILY SSF51445 233 611 5.05E-78 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS05480 66ddf08d6e5eaedb6f6093d0a3bf9c63 704 PANTHER PTHR10357 58 182 3.4E-208 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 RM25_RS05480 66ddf08d6e5eaedb6f6093d0a3bf9c63 704 PANTHER PTHR10357 219 698 3.4E-208 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 Gene3D G3DSA:3.20.20.330 1 322 5.2E-97 T 22-04-2016 IPR003726 Homocysteine-binding domain RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 Pfam PF02607 B12 binding domain 616 688 8.3E-24 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 SMART SM01018 613 695 8.4E-36 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 Gene3D G3DSA:1.10.1240.10 608 692 3.9E-29 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 SUPERFAMILY SSF56507 866 1143 2.09E-77 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 Pfam PF00809 Pterin binding enzyme 318 553 1.4E-41 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 932 1142 1.7E-28 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 SUPERFAMILY SSF51717 315 586 8.11E-75 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 Pfam PF02310 B12 binding domain 701 793 2.8E-16 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 Gene3D G3DSA:3.20.20.20 323 584 6.2E-85 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 TIGRFAM TIGR02082 metH: methionine synthase 1 1142 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 Gene3D G3DSA:3.40.50.280 698 828 5.7E-44 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 PANTHER PTHR21091 1 357 2.4E-98 T 22-04-2016 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 SUPERFAMILY SSF82282 1 357 3.79E-97 T 22-04-2016 IPR003726 Homocysteine-binding domain RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 SUPERFAMILY SSF52242 696 829 7.85E-36 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 PIRSF PIRSF000381 1 1143 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 PANTHER PTHR21091:SF97 1 357 2.4E-98 T 22-04-2016 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 Gene3D G3DSA:3.10.196.10 920 1142 3.3E-60 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 Pfam PF02574 Homocysteine S-methyltransferase 1 281 6.1E-65 T 22-04-2016 IPR003726 Homocysteine-binding domain RM25_RS05205 5b0b5b438afa913ce5c347718ee1e7a9 1143 SUPERFAMILY SSF47644 612 693 2.75E-22 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 253 277 2.2E-15 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 386 404 2.2E-15 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 150 2.2E-15 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 128 408 3.8E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 Gene3D G3DSA:3.50.50.60 269 425 3.5E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 36 115 2.6E-16 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 Pfam PF00037 4Fe-4S binding domain 516 538 6.4E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 129 148 1.0E-18 T 22-04-2016 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 275 1.0E-18 T 22-04-2016 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 376 398 1.0E-18 T 22-04-2016 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 364 1.0E-18 T 22-04-2016 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 491 502 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 522 533 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 SUPERFAMILY SSF46548 36 137 5.49E-21 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 PANTHER PTHR11938:SF99 37 423 1.2E-82 T 22-04-2016 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 PANTHER PTHR11938 37 423 1.2E-82 T 22-04-2016 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 Gene3D G3DSA:3.40.50.720 129 268 1.2E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 Gene3D G3DSA:1.10.1060.10 442 539 6.4E-19 T 22-04-2016 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 Gene3D G3DSA:1.10.1060.10 36 128 5.2E-24 T 22-04-2016 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 SUPERFAMILY SSF51971 126 357 1.88E-57 T 22-04-2016 RM25_RS00915 bf8901b732e4ddb9ca1a23b81a4faf97 543 SUPERFAMILY SSF46548 411 539 2.04E-22 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 SUPERFAMILY SSF143517 1040 1137 1.07E-29 T 22-04-2016 RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 Gene3D G3DSA:3.30.2060.10 145 219 5.3E-12 T 22-04-2016 RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 PANTHER PTHR14025:SF21 429 1132 0.0 T 22-04-2016 RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 161 1123 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 SMART SM01058 521 622 1.4E-46 T 22-04-2016 IPR003711 CarD-like/TRCF domain RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 Pfam PF00270 DEAD/DEAH box helicase 671 812 5.9E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 SMART SM00982 1050 1148 1.1E-33 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 SUPERFAMILY SSF141259 519 593 1.06E-17 T 22-04-2016 IPR003711 CarD-like/TRCF domain RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 PANTHER PTHR14025 429 1132 0.0 T 22-04-2016 RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 Pfam PF03461 TRCF domain 1051 1132 3.3E-25 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 Pfam PF00271 Helicase conserved C-terminal domain 853 955 5.3E-14 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 SUPERFAMILY SSF52540 35 349 1.59E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 Pfam PF02559 CarD-like/TRCF domain 522 621 1.3E-28 T 22-04-2016 IPR003711 CarD-like/TRCF domain RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 SUPERFAMILY SSF52540 404 507 2.12E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 Gene3D G3DSA:3.40.50.300 634 832 2.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 SUPERFAMILY SSF52540 828 1036 1.1E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 SUPERFAMILY SSF52540 571 829 4.62E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 38 1171 28.353 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 SMART SM00487 646 836 1.3E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 SMART SM00490 872 956 1.1E-15 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS08125 d8687cdc4bb949d4d5390c94ce0585d1 1232 Gene3D G3DSA:3.40.50.300 847 1002 2.5E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 Gene3D G3DSA:3.40.50.300 1 272 5.6E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 SUPERFAMILY SSF54211 465 586 5.82E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 SMART SM00838 587 674 4.7E-45 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 164 6.0E-33 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 Gene3D G3DSA:3.30.230.10 470 583 1.8E-49 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 Hamap MF_00054_B Elongation factor G [fusA]. 1 678 106.63 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 Pfam PF00679 Elongation factor G C-terminus 588 673 5.3E-26 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 SUPERFAMILY SSF54980 590 677 1.68E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 SUPERFAMILY SSF54980 390 467 4.32E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 PANTHER PTHR23115:SF66 1 162 0.0 T 22-04-2016 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 PANTHER PTHR23115:SF66 289 678 0.0 T 22-04-2016 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 PANTHER PTHR23115:SF66 240 268 0.0 T 22-04-2016 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 PRINTS PR00315 GTP-binding elongation factor signature 63 73 7.5E-9 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 PRINTS PR00315 GTP-binding elongation factor signature 115 124 7.5E-9 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 PRINTS PR00315 GTP-binding elongation factor signature 43 51 7.5E-9 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 PRINTS PR00315 GTP-binding elongation factor signature 79 90 7.5E-9 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 PANTHER PTHR23115 1 162 0.0 T 22-04-2016 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 PANTHER PTHR23115 289 678 0.0 T 22-04-2016 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 PANTHER PTHR23115 240 268 0.0 T 22-04-2016 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 Pfam PF03144 Elongation factor Tu domain 2 310 377 5.3E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 SMART SM00889 466 585 2.3E-73 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 Pfam PF14492 Elongation Factor G, domain II 390 463 1.8E-33 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 SUPERFAMILY SSF52540 1 267 2.76E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 Pfam PF00009 Elongation factor Tu GTP binding domain 1 267 4.4E-65 T 22-04-2016 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 Pfam PF03764 Elongation factor G, domain IV 465 584 8.1E-51 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 SUPERFAMILY SSF50447 250 390 4.24E-37 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 36 51 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 Gene3D G3DSA:3.30.70.240 584 677 3.2E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 Gene3D G3DSA:3.30.70.870 391 466 3.5E-37 T 22-04-2016 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 Gene3D G3DSA:2.40.30.10 292 390 1.6E-39 T 22-04-2016 RM25_RS02575 0394961f09df0edc17295192d816a8e1 682 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 678 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RM25_RS06255 16c1f16efcb3ea07679b272cd3f5283f 604 TIGRFAM TIGR04491 reactive_PduG: diol dehydratase reactivase alpha subunit 3 598 2.1E-293 T 22-04-2016 IPR009191 Diol dehydratase-reactivating factor alpha subunit RM25_RS06255 16c1f16efcb3ea07679b272cd3f5283f 604 SUPERFAMILY SSF53067 254 401 1.1E-56 T 22-04-2016 RM25_RS06255 16c1f16efcb3ea07679b272cd3f5283f 604 SUPERFAMILY SSF53067 1 93 1.1E-56 T 22-04-2016 RM25_RS06255 16c1f16efcb3ea07679b272cd3f5283f 604 SUPERFAMILY SSF82317 93 253 6.67E-62 T 22-04-2016 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain RM25_RS06255 16c1f16efcb3ea07679b272cd3f5283f 604 Gene3D G3DSA:3.30.420.40 470 600 2.9E-30 T 22-04-2016 RM25_RS06255 16c1f16efcb3ea07679b272cd3f5283f 604 Gene3D G3DSA:3.30.420.40 296 442 3.4E-35 T 22-04-2016 RM25_RS06255 16c1f16efcb3ea07679b272cd3f5283f 604 SUPERFAMILY SSF53067 405 598 3.2E-29 T 22-04-2016 RM25_RS06255 16c1f16efcb3ea07679b272cd3f5283f 604 Pfam PF08841 Diol dehydratase reactivase ATPase-like domain 273 599 3.1E-155 T 22-04-2016 IPR030994 Diol dehydratase reactivase ATPase-like domain RM25_RS06255 16c1f16efcb3ea07679b272cd3f5283f 604 Gene3D G3DSA:3.50.30.70 97 246 2.5E-65 T 22-04-2016 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain RM25_RS11610 7d2d7e2bd0edaadccb804ba4ebddadb4 355 PANTHER PTHR12428 178 355 6.8E-51 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RM25_RS11610 7d2d7e2bd0edaadccb804ba4ebddadb4 355 PANTHER PTHR12428 36 136 6.8E-51 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RM25_RS11610 7d2d7e2bd0edaadccb804ba4ebddadb4 355 PANTHER PTHR12428:SF14 178 355 6.8E-51 T 22-04-2016 RM25_RS11610 7d2d7e2bd0edaadccb804ba4ebddadb4 355 PANTHER PTHR12428:SF14 36 136 6.8E-51 T 22-04-2016 RM25_RS11610 7d2d7e2bd0edaadccb804ba4ebddadb4 355 Pfam PF02096 60Kd inner membrane protein 45 260 3.4E-58 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RM25_RS11610 7d2d7e2bd0edaadccb804ba4ebddadb4 355 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 44 260 4.5E-62 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RM25_RS01160 13e8513679a44efbb18377a1abaa0b54 352 Gene3D G3DSA:3.40.50.2300 191 348 3.7E-42 T 22-04-2016 RM25_RS01160 13e8513679a44efbb18377a1abaa0b54 352 SUPERFAMILY SSF53822 80 350 3.14E-52 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RM25_RS01160 13e8513679a44efbb18377a1abaa0b54 352 SMART SM00354 20 90 8.4E-23 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RM25_RS01160 13e8513679a44efbb18377a1abaa0b54 352 Pfam PF13377 Periplasmic binding protein-like domain 188 347 7.7E-31 T 22-04-2016 RM25_RS01160 13e8513679a44efbb18377a1abaa0b54 352 PANTHER PTHR30146 20 352 1.7E-86 T 22-04-2016 RM25_RS01160 13e8513679a44efbb18377a1abaa0b54 352 Gene3D G3DSA:3.40.50.2300 73 190 7.5E-33 T 22-04-2016 RM25_RS01160 13e8513679a44efbb18377a1abaa0b54 352 Gene3D G3DSA:1.10.260.40 21 72 3.6E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS01160 13e8513679a44efbb18377a1abaa0b54 352 Pfam PF00356 Bacterial regulatory proteins, lacI family 22 67 9.5E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RM25_RS01160 13e8513679a44efbb18377a1abaa0b54 352 SUPERFAMILY SSF47413 20 78 1.13E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS06350 d92f5670191431e3d8ad3389eda79f4e 290 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 197 225 3.0E-34 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RM25_RS06350 d92f5670191431e3d8ad3389eda79f4e 290 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 147 173 3.0E-34 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RM25_RS06350 d92f5670191431e3d8ad3389eda79f4e 290 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 129 147 3.0E-34 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RM25_RS06350 d92f5670191431e3d8ad3389eda79f4e 290 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 44 71 3.0E-34 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RM25_RS06350 d92f5670191431e3d8ad3389eda79f4e 290 PANTHER PTHR30371:SF0 14 290 1.2E-67 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RM25_RS06350 d92f5670191431e3d8ad3389eda79f4e 290 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 45 270 4.9E-55 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RM25_RS06350 d92f5670191431e3d8ad3389eda79f4e 290 Pfam PF00902 Sec-independent protein translocase protein (TatC) 47 265 9.5E-57 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RM25_RS06350 d92f5670191431e3d8ad3389eda79f4e 290 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 39 284 15.997 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RM25_RS06350 d92f5670191431e3d8ad3389eda79f4e 290 PANTHER PTHR30371 14 290 1.2E-67 T 22-04-2016 RM25_RS09680 9d556c2c2657267862f9264dae725366 820 SUPERFAMILY SSF52540 172 466 8.12E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09680 9d556c2c2657267862f9264dae725366 820 SMART SM00487 45 328 3.5E-32 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS09680 9d556c2c2657267862f9264dae725366 820 Gene3D G3DSA:3.40.50.300 164 301 9.2E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09680 9d556c2c2657267862f9264dae725366 820 Gene3D G3DSA:3.40.50.300 33 90 9.2E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09680 9d556c2c2657267862f9264dae725366 820 SMART SM00490 365 449 1.8E-10 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS09680 9d556c2c2657267862f9264dae725366 820 Pfam PF09369 Domain of unknown function (DUF1998) 711 789 7.0E-15 T 22-04-2016 IPR018973 DEAD/DEAH-box helicase, putative RM25_RS09680 9d556c2c2657267862f9264dae725366 820 Pfam PF00271 Helicase conserved C-terminal domain 347 448 9.5E-13 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS09680 9d556c2c2657267862f9264dae725366 820 Gene3D G3DSA:3.40.50.300 308 480 2.3E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09680 9d556c2c2657267862f9264dae725366 820 PANTHER PTHR24031 33 89 3.5E-103 T 22-04-2016 RM25_RS09680 9d556c2c2657267862f9264dae725366 820 PANTHER PTHR24031 169 481 3.5E-103 T 22-04-2016 RM25_RS09680 9d556c2c2657267862f9264dae725366 820 Pfam PF00270 DEAD/DEAH box helicase 51 296 4.4E-23 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RM25_RS09680 9d556c2c2657267862f9264dae725366 820 TIGRFAM TIGR03817 DECH_helic: helicase/secretion neighborhood putative DEAH-box helicase 14 815 5.7E-296 T 22-04-2016 IPR022307 DEAD/DEAH-box helicase, putative, actinobacteria RM25_RS09680 9d556c2c2657267862f9264dae725366 820 SUPERFAMILY SSF52540 29 88 1.84E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09680 9d556c2c2657267862f9264dae725366 820 PANTHER PTHR24031:SF122 33 89 3.5E-103 T 22-04-2016 RM25_RS09680 9d556c2c2657267862f9264dae725366 820 PANTHER PTHR24031:SF122 169 481 3.5E-103 T 22-04-2016 RM25_RS02360 09adbb91882e68998aca2dc2d9dc1c9d 446 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 49 220 2.1E-46 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain RM25_RS02360 09adbb91882e68998aca2dc2d9dc1c9d 446 PANTHER PTHR11780 1 413 3.0E-205 T 22-04-2016 RM25_RS02360 09adbb91882e68998aca2dc2d9dc1c9d 446 SUPERFAMILY SSF140490 326 416 2.62E-30 T 22-04-2016 RM25_RS02360 09adbb91882e68998aca2dc2d9dc1c9d 446 SUPERFAMILY SSF142019 7 240 2.88E-87 T 22-04-2016 RM25_RS02360 09adbb91882e68998aca2dc2d9dc1c9d 446 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 342 353 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RM25_RS02360 09adbb91882e68998aca2dc2d9dc1c9d 446 PANTHER PTHR11780:SF10 1 413 3.0E-205 T 22-04-2016 RM25_RS02360 09adbb91882e68998aca2dc2d9dc1c9d 446 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 9 413 3.2E-184 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 RM25_RS02360 09adbb91882e68998aca2dc2d9dc1c9d 446 SUPERFAMILY SSF142984 243 324 2.22E-21 T 22-04-2016 RM25_RS02360 09adbb91882e68998aca2dc2d9dc1c9d 446 SMART SM00928 329 374 1.3E-22 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RM25_RS02360 09adbb91882e68998aca2dc2d9dc1c9d 446 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 332 413 5.0E-28 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RM25_RS02360 09adbb91882e68998aca2dc2d9dc1c9d 446 Pfam PF10531 SLBB domain 245 291 1.2E-8 T 22-04-2016 IPR019554 Soluble ligand binding domain RM25_RS00200 5736ba02270e4e7b0efeecdbb6bc3f8e 403 Pfam PF01546 Peptidase family M20/M25/M40 78 395 5.8E-30 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RM25_RS00200 5736ba02270e4e7b0efeecdbb6bc3f8e 403 Gene3D G3DSA:3.40.630.10 307 401 1.9E-80 T 22-04-2016 RM25_RS00200 5736ba02270e4e7b0efeecdbb6bc3f8e 403 Gene3D G3DSA:3.40.630.10 11 187 1.9E-80 T 22-04-2016 RM25_RS00200 5736ba02270e4e7b0efeecdbb6bc3f8e 403 PIRSF PIRSF005962 6 403 4.5E-97 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RM25_RS00200 5736ba02270e4e7b0efeecdbb6bc3f8e 403 PANTHER PTHR11014:SF63 12 403 8.9E-116 T 22-04-2016 RM25_RS00200 5736ba02270e4e7b0efeecdbb6bc3f8e 403 SUPERFAMILY SSF53187 307 401 1.26E-67 T 22-04-2016 RM25_RS00200 5736ba02270e4e7b0efeecdbb6bc3f8e 403 SUPERFAMILY SSF53187 11 206 1.26E-67 T 22-04-2016 RM25_RS00200 5736ba02270e4e7b0efeecdbb6bc3f8e 403 Gene3D G3DSA:3.30.70.360 190 306 1.3E-33 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS00200 5736ba02270e4e7b0efeecdbb6bc3f8e 403 SUPERFAMILY SSF55031 192 305 1.44E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS00200 5736ba02270e4e7b0efeecdbb6bc3f8e 403 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 383 5.9E-87 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RM25_RS00200 5736ba02270e4e7b0efeecdbb6bc3f8e 403 Pfam PF07687 Peptidase dimerisation domain 197 290 3.4E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS00200 5736ba02270e4e7b0efeecdbb6bc3f8e 403 PANTHER PTHR11014 12 403 8.9E-116 T 22-04-2016 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 Hamap MF_01382 Protein translocase subunit SecA [secA]. 1 819 19.375 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 SMART SM00957 1 379 6.1E-264 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 SUPERFAMILY SSF81886 613 827 6.93E-70 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 SUPERFAMILY SSF81886 919 931 6.93E-70 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 Gene3D G3DSA:3.40.50.300 3 223 2.0E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 Gene3D G3DSA:3.40.50.300 346 393 2.0E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 PRINTS PR00906 SecA protein signature 353 370 4.3E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 PRINTS PR00906 SecA protein signature 112 122 4.3E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 PRINTS PR00906 SecA protein signature 390 403 4.3E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 PRINTS PR00906 SecA protein signature 165 185 4.3E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 PRINTS PR00906 SecA protein signature 316 338 4.3E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 PRINTS PR00906 SecA protein signature 96 110 4.3E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 PRINTS PR00906 SecA protein signature 58 82 4.3E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 23 802 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 ProSitePatterns PS01312 SecA family signature. 477 492 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 Pfam PF02810 SEC-C motif 923 941 3.5E-10 T 22-04-2016 IPR004027 SEC-C motif RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 SUPERFAMILY SSF52540 9 223 1.19E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 SUPERFAMILY SSF52540 345 392 1.19E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 Gene3D G3DSA:3.40.50.300 394 611 2.8E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 Gene3D G3DSA:1.10.3060.10 640 817 5.1E-52 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 Gene3D G3DSA:3.90.1440.10 226 345 5.5E-45 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 SUPERFAMILY SSF52540 393 610 1.36E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 PANTHER PTHR30612 11 497 0.0 T 22-04-2016 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 PANTHER PTHR30612 921 944 0.0 T 22-04-2016 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 PANTHER PTHR30612 542 878 0.0 T 22-04-2016 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 Pfam PF07516 SecA Wing and Scaffold domain 609 816 4.3E-63 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 Pfam PF01043 SecA preprotein cross-linking domain 227 335 1.2E-34 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 SUPERFAMILY SSF81767 222 345 1.96E-41 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 Pfam PF07517 SecA DEAD-like domain 5 379 1.1E-125 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RM25_RS05940 2a10e75e35770623428fcf7cbed5b6a5 946 SMART SM00958 223 335 7.7E-58 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 PANTHER PTHR13847:SF180 5 167 4.1E-64 T 22-04-2016 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 PANTHER PTHR13847:SF180 197 416 4.1E-64 T 22-04-2016 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 Gene3D G3DSA:3.30.9.10 247 354 6.6E-26 T 22-04-2016 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 Pfam PF01266 FAD dependent oxidoreductase 4 391 3.3E-47 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 PANTHER PTHR13847 5 167 4.1E-64 T 22-04-2016 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 PANTHER PTHR13847 197 416 4.1E-64 T 22-04-2016 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 SUPERFAMILY SSF51905 230 262 9.06E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 SUPERFAMILY SSF51905 355 411 9.06E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 SUPERFAMILY SSF51905 3 194 9.06E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 SUPERFAMILY SSF54373 262 354 1.96E-12 T 22-04-2016 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 Gene3D G3DSA:3.50.50.60 4 82 1.7E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 Gene3D G3DSA:3.50.50.60 141 194 1.7E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 Gene3D G3DSA:3.50.50.60 230 246 1.7E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS07775 f9563347237f2d33dc7f2a4fe0915039 417 Gene3D G3DSA:3.50.50.60 355 412 1.7E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS11735 3d5234e7675a0a961c43a1bead1a5ab2 334 PANTHER PTHR21666 217 324 3.3E-31 T 22-04-2016 RM25_RS11735 3d5234e7675a0a961c43a1bead1a5ab2 334 Pfam PF00877 NlpC/P60 family 235 324 4.5E-24 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RM25_RS11735 3d5234e7675a0a961c43a1bead1a5ab2 334 Gene3D G3DSA:3.90.1720.10 218 324 6.0E-40 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RM25_RS11735 3d5234e7675a0a961c43a1bead1a5ab2 334 SUPERFAMILY SSF54001 218 323 5.4E-37 T 22-04-2016 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 PANTHER PTHR11748 222 540 7.8E-106 T 22-04-2016 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 PANTHER PTHR11748 4 183 7.8E-106 T 22-04-2016 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 Pfam PF01565 FAD binding domain 44 181 8.6E-36 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 SUPERFAMILY SSF46548 479 611 6.8E-8 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 Gene3D G3DSA:1.10.1060.10 475 616 4.3E-13 T 22-04-2016 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 Gene3D G3DSA:3.30.465.10 99 252 3.5E-35 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 Pfam PF02913 FAD linked oxidases, C-terminal domain 258 496 1.1E-48 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 SUPERFAMILY SSF56176 8 252 1.12E-53 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 SUPERFAMILY SSF55103 258 500 3.11E-53 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 Gene3D G3DSA:3.30.43.10 8 98 5.0E-17 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 594 605 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 PANTHER PTHR11748:SF35 222 540 7.8E-106 T 22-04-2016 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 PANTHER PTHR11748:SF35 4 183 7.8E-106 T 22-04-2016 RM25_RS03765 ab34cf07195be4424c78a6b0c23ebbc2 935 Pfam PF13183 4Fe-4S dicluster domain 528 608 4.9E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 269 346 1.6E-13 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 Gene3D G3DSA:1.10.10.400 265 338 4.5E-19 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 Gene3D G3DSA:2.40.50.140 656 724 1.4E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 TIGRFAM TIGR02696 pppGpp_PNP: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase 5 726 0.0 T 22-04-2016 IPR014069 Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase GO:0004654|GO:0005737|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 SMART SM00322 583 648 9.9E-15 T 22-04-2016 IPR004087 K Homology domain GO:0003676 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 Pfam PF01138 3' exoribonuclease family, domain 1 351 483 7.4E-13 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 Pfam PF01138 3' exoribonuclease family, domain 1 23 152 9.6E-15 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 SUPERFAMILY SSF55666 153 260 1.16E-26 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 Pfam PF00575 S1 RNA binding domain 652 722 1.9E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 Pfam PF00013 KH domain 587 644 1.0E-11 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 SUPERFAMILY SSF46915 265 347 3.92E-15 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 SUPERFAMILY SSF55666 477 577 1.43E-22 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 SUPERFAMILY SSF54791 585 672 9.28E-19 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 SUPERFAMILY SSF50249 650 724 1.01E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 PANTHER PTHR11252 17 724 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 10 730 26.236 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 Gene3D G3DSA:3.30.1370.10 582 655 3.8E-24 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 PIRSF PIRSF005499 8 736 3.2E-275 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 SUPERFAMILY SSF54211 8 152 1.77E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 SMART SM00316 653 727 5.4E-16 T 22-04-2016 IPR022967 RNA-binding domain, S1 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 18 724 1.1E-254 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 Gene3D G3DSA:3.30.230.70 9 250 1.3E-80 T 22-04-2016 IPR027408 PNPase/RNase PH domain RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 Gene3D G3DSA:3.30.230.70 339 574 3.7E-76 T 22-04-2016 IPR027408 PNPase/RNase PH domain RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 PANTHER PTHR11252:SF0 17 724 0.0 T 22-04-2016 RM25_RS06790 31a58f77a23de536b693d5539f72a534 736 SUPERFAMILY SSF54211 324 495 3.69E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS05190 cbeb52572f6627154998e79efa5d1c46 222 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RM25_RS05190 cbeb52572f6627154998e79efa5d1c46 222 PANTHER PTHR11749:SF3 1 221 7.3E-104 T 22-04-2016 RM25_RS05190 cbeb52572f6627154998e79efa5d1c46 222 Gene3D G3DSA:3.20.20.70 4 219 2.0E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS05190 cbeb52572f6627154998e79efa5d1c46 222 SUPERFAMILY SSF51366 3 212 4.03E-59 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RM25_RS05190 cbeb52572f6627154998e79efa5d1c46 222 PIRSF PIRSF001461 1 222 1.2E-85 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RM25_RS05190 cbeb52572f6627154998e79efa5d1c46 222 PANTHER PTHR11749 1 221 7.3E-104 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RM25_RS05190 cbeb52572f6627154998e79efa5d1c46 222 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RM25_RS05190 cbeb52572f6627154998e79efa5d1c46 222 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 199 8.4E-70 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RM25_RS05190 cbeb52572f6627154998e79efa5d1c46 222 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 212 2.7E-73 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RM25_RS06845 71df79227d33b3658ef2d70c74fcefbf 328 Pfam PF14530 Domain of unknown function (DUF4439) 207 306 6.9E-8 T 22-04-2016 IPR029447 Domain of unknown function DUF4439 RM25_RS06845 71df79227d33b3658ef2d70c74fcefbf 328 Gene3D G3DSA:1.20.1260.10 196 304 2.2E-9 T 22-04-2016 IPR012347 Ferritin-related RM25_RS06845 71df79227d33b3658ef2d70c74fcefbf 328 SUPERFAMILY SSF47240 197 309 1.54E-8 T 22-04-2016 IPR009078 Ferritin-like superfamily RM25_RS09585 2192e52acda601beea06d59c0280e67a 418 SUPERFAMILY SSF53335 173 217 1.05E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09585 2192e52acda601beea06d59c0280e67a 418 SUPERFAMILY SSF53335 255 302 1.05E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09585 2192e52acda601beea06d59c0280e67a 418 Gene3D G3DSA:3.40.50.150 133 280 1.7E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09585 2192e52acda601beea06d59c0280e67a 418 Gene3D G3DSA:3.40.50.150 281 299 1.7E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09585 2192e52acda601beea06d59c0280e67a 418 Gene3D G3DSA:3.40.50.150 331 393 1.7E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS01915 06f9ea453f19a2f23efe26ba8f1efb12 850 SMART SM00487 32 215 1.2E-14 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS01915 06f9ea453f19a2f23efe26ba8f1efb12 850 PANTHER PTHR12131 322 375 2.3E-12 T 22-04-2016 RM25_RS01915 06f9ea453f19a2f23efe26ba8f1efb12 850 Gene3D G3DSA:3.40.50.300 24 198 2.7E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01915 06f9ea453f19a2f23efe26ba8f1efb12 850 SMART SM00490 282 368 3.4E-14 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS01915 06f9ea453f19a2f23efe26ba8f1efb12 850 PANTHER PTHR12131:SF4 322 375 2.3E-12 T 22-04-2016 RM25_RS01915 06f9ea453f19a2f23efe26ba8f1efb12 850 SUPERFAMILY SSF52540 51 255 2.28E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01915 06f9ea453f19a2f23efe26ba8f1efb12 850 SUPERFAMILY SSF52540 288 379 2.28E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01915 06f9ea453f19a2f23efe26ba8f1efb12 850 Gene3D G3DSA:3.40.50.300 221 401 9.0E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01915 06f9ea453f19a2f23efe26ba8f1efb12 850 Pfam PF12029 Domain of unknown function (DUF3516) 379 839 6.8E-186 T 22-04-2016 IPR021904 Protein of unknown function DUF3516 RM25_RS01915 06f9ea453f19a2f23efe26ba8f1efb12 850 Pfam PF00270 DEAD/DEAH box helicase 38 186 3.9E-9 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RM25_RS01915 06f9ea453f19a2f23efe26ba8f1efb12 850 Pfam PF00271 Helicase conserved C-terminal domain 289 368 2.1E-6 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS07560 ccff161a82f6f7425751a69dec939155 149 Pfam PF02416 mttA/Hcf106 family 12 36 4.2E-4 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RM25_RS07560 ccff161a82f6f7425751a69dec939155 149 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 6 26 4.0E-7 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RM25_RS07560 ccff161a82f6f7425751a69dec939155 149 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 26 45 4.0E-7 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RM25_RS07560 ccff161a82f6f7425751a69dec939155 149 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 45 63 4.0E-7 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RM25_RS05380 ead2b8fbd316d6943b44fff66968c95c 263 SUPERFAMILY SSF52540 4 258 8.52E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05380 ead2b8fbd316d6943b44fff66968c95c 263 PANTHER PTHR24220:SF358 7 109 1.4E-118 T 22-04-2016 RM25_RS05380 ead2b8fbd316d6943b44fff66968c95c 263 PANTHER PTHR24220:SF358 125 260 1.4E-118 T 22-04-2016 RM25_RS05380 ead2b8fbd316d6943b44fff66968c95c 263 SMART SM00382 30 234 2.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS05380 ead2b8fbd316d6943b44fff66968c95c 263 PANTHER PTHR24220 7 109 1.4E-118 T 22-04-2016 RM25_RS05380 ead2b8fbd316d6943b44fff66968c95c 263 PANTHER PTHR24220 125 260 1.4E-118 T 22-04-2016 RM25_RS05380 ead2b8fbd316d6943b44fff66968c95c 263 Pfam PF00005 ABC transporter 21 185 8.6E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS05380 ead2b8fbd316d6943b44fff66968c95c 263 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 236 257 1.5E-12 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RM25_RS05380 ead2b8fbd316d6943b44fff66968c95c 263 Gene3D G3DSA:3.40.50.300 2 257 1.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08135 17277ff547fb3e8a098493f9b8e47d3e 197 SUPERFAMILY SSF53178 3 196 2.75E-63 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RM25_RS08135 17277ff547fb3e8a098493f9b8e47d3e 197 Pfam PF01195 Peptidyl-tRNA hydrolase 5 192 4.4E-57 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RM25_RS08135 17277ff547fb3e8a098493f9b8e47d3e 197 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 196 1.0E-54 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RM25_RS08135 17277ff547fb3e8a098493f9b8e47d3e 197 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 189 34.342 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RM25_RS08135 17277ff547fb3e8a098493f9b8e47d3e 197 PANTHER PTHR17224 1 196 6.1E-74 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RM25_RS08135 17277ff547fb3e8a098493f9b8e47d3e 197 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 118 128 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RM25_RS08135 17277ff547fb3e8a098493f9b8e47d3e 197 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RM25_RS08135 17277ff547fb3e8a098493f9b8e47d3e 197 Gene3D G3DSA:3.40.50.1470 1 196 1.2E-69 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RM25_RS08990 77a06f1524f69100a1d9a4db737e65bd 340 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 11 336 2.3E-72 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RM25_RS08990 77a06f1524f69100a1d9a4db737e65bd 340 Gene3D G3DSA:3.20.20.70 3 337 5.9E-119 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS08990 77a06f1524f69100a1d9a4db737e65bd 340 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 158 169 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RM25_RS08990 77a06f1524f69100a1d9a4db737e65bd 340 SUPERFAMILY SSF51569 5 336 2.93E-97 T 22-04-2016 RM25_RS08990 77a06f1524f69100a1d9a4db737e65bd 340 PANTHER PTHR30559 1 339 9.8E-180 T 22-04-2016 RM25_RS08990 77a06f1524f69100a1d9a4db737e65bd 340 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 334 2.9E-126 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS08990 77a06f1524f69100a1d9a4db737e65bd 340 PIRSF PIRSF001359 6 338 1.3E-66 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RM25_RS08990 77a06f1524f69100a1d9a4db737e65bd 340 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 86 97 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RM25_RS08990 77a06f1524f69100a1d9a4db737e65bd 340 PANTHER PTHR30559:SF0 1 339 9.8E-180 T 22-04-2016 RM25_RS08990 77a06f1524f69100a1d9a4db737e65bd 340 Pfam PF01116 Fructose-bisphosphate aldolase class-II 10 336 1.6E-81 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RM25_RS04935 30455297738abb7d41826f5b5bd4d1f3 417 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS04935 30455297738abb7d41826f5b5bd4d1f3 417 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 57 375 2.7E-40 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS04935 30455297738abb7d41826f5b5bd4d1f3 417 PANTHER PTHR10314 13 401 7.1E-204 T 22-04-2016 RM25_RS04935 30455297738abb7d41826f5b5bd4d1f3 417 PIRSF PIRSF001413 1 408 2.1E-154 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS04935 30455297738abb7d41826f5b5bd4d1f3 417 SUPERFAMILY SSF53686 9 403 2.1E-133 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS04935 30455297738abb7d41826f5b5bd4d1f3 417 PANTHER PTHR10314:SF3 13 401 7.1E-204 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS04935 30455297738abb7d41826f5b5bd4d1f3 417 Gene3D G3DSA:3.40.50.1100 183 404 1.4E-88 T 22-04-2016 RM25_RS04935 30455297738abb7d41826f5b5bd4d1f3 417 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 13 402 9.1E-176 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS04935 30455297738abb7d41826f5b5bd4d1f3 417 Gene3D G3DSA:3.40.50.1100 106 182 1.5E-21 T 22-04-2016 RM25_RS04935 30455297738abb7d41826f5b5bd4d1f3 417 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 8 403 49.361 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 Gene3D G3DSA:1.10.287.130 216 291 7.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 3.9E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 3.9E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 3.9E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 3.9E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 439 4.5E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 Pfam PF00672 HAMP domain 152 219 4.8E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 SMART SM00304 172 224 3.3E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 SMART SM00388 225 295 8.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 293 1.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 SUPERFAMILY SSF55874 285 443 1.83E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 PANTHER PTHR24423 7 18 2.6E-67 T 22-04-2016 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 PANTHER PTHR24423 166 443 2.6E-67 T 22-04-2016 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 SMART SM00387 335 441 4.3E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 Gene3D G3DSA:3.30.565.10 298 444 1.5E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 SUPERFAMILY SSF158472 172 221 3.4E-7 T 22-04-2016 RM25_RS10820 7cc5a9bef199d932ce09ef1ee7fe63e8 450 SUPERFAMILY SSF47384 208 292 1.86E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 450 32.733 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 433 2.1E-167 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 SMART SM00962 101 299 3.2E-105 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 PANTHER PTHR11564 1 438 2.7E-225 T 22-04-2016 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 9.5E-21 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 Gene3D G3DSA:3.40.50.300 99 300 3.9E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06700 6434b789f8127395a95847b4cd371978 523 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 272 285 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 Pfam PF02978 Signal peptide binding domain 332 431 9.4E-29 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 SMART SM00963 1 86 4.2E-31 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 SUPERFAMILY SSF47446 332 434 2.94E-33 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 Pfam PF00448 SRP54-type protein, GTPase domain 101 299 6.9E-69 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 Gene3D G3DSA:1.20.120.140 2 88 6.5E-33 T 22-04-2016 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 Gene3D G3DSA:1.10.260.30 332 435 1.8E-36 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 SUPERFAMILY SSF52540 42 359 1.86E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06700 6434b789f8127395a95847b4cd371978 523 PANTHER PTHR11564:SF7 1 438 2.7E-225 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RM25_RS06700 6434b789f8127395a95847b4cd371978 523 SMART SM00382 100 304 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 229 1.2E-34 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 PIRSF PIRSF006205 1 390 7.8E-134 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 Pfam PF13288 DXP reductoisomerase C-terminal domain 262 380 7.1E-35 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 SUPERFAMILY SSF69055 293 385 4.45E-26 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 SUPERFAMILY SSF55347 128 264 4.58E-50 T 22-04-2016 RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 PANTHER PTHR30525 1 383 8.0E-172 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 SUPERFAMILY SSF51735 2 142 7.58E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 PANTHER PTHR30525:SF0 1 383 8.0E-172 T 22-04-2016 RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 385 41.852 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 Gene3D G3DSA:3.40.50.720 2 150 2.6E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 134 5.0E-35 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 384 2.2E-108 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS06865 ec393cd81b05596aaa5da920c7fec234 391 Gene3D G3DSA:1.10.1740.10 303 386 5.9E-29 T 22-04-2016 RM25_RS08885 2a65c5dd4c4dfe0dff42a1f29cb4082a 373 Pfam PF04055 Radical SAM superfamily 28 187 1.3E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RM25_RS08885 2a65c5dd4c4dfe0dff42a1f29cb4082a 373 TIGRFAM TIGR04053 sam_11: radical SAM protein, BA_1875 family 17 362 4.7E-130 T 22-04-2016 IPR027634 Radical SAM protein, BA_1875 family RM25_RS08885 2a65c5dd4c4dfe0dff42a1f29cb4082a 373 PANTHER PTHR11228 20 368 1.1E-94 T 22-04-2016 RM25_RS08885 2a65c5dd4c4dfe0dff42a1f29cb4082a 373 Gene3D G3DSA:3.20.20.70 18 349 2.5E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS08885 2a65c5dd4c4dfe0dff42a1f29cb4082a 373 PIRSF PIRSF037420 11 372 1.5E-83 T 22-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 RM25_RS08885 2a65c5dd4c4dfe0dff42a1f29cb4082a 373 SUPERFAMILY SSF102114 17 339 1.37E-53 T 22-04-2016 RM25_RS08885 2a65c5dd4c4dfe0dff42a1f29cb4082a 373 PANTHER PTHR11228:SF32 20 368 1.1E-94 T 22-04-2016 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 PANTHER PTHR11638:SF120 1 853 0.0 T 22-04-2016 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 Gene3D G3DSA:1.10.8.60 345 428 1.2E-36 T 22-04-2016 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 Gene3D G3DSA:3.40.50.300 161 344 7.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 SUPERFAMILY SSF52540 161 549 2.62E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 98 141 1.1E-7 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 68 1.3E-7 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 762 1.4E-54 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 337 7.3E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 768 847 1.9E-23 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 Gene3D G3DSA:3.40.50.300 554 779 3.0E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 PANTHER PTHR11638 1 853 0.0 T 22-04-2016 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 Gene3D G3DSA:1.10.1780.10 1 149 9.7E-40 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 Gene3D G3DSA:1.10.8.60 780 858 8.7E-28 T 22-04-2016 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 SUPERFAMILY SSF52540 550 850 3.08E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 SMART SM01086 768 859 1.8E-31 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 7.7E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 7.7E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 7.7E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 7.7E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 SUPERFAMILY SSF81923 4 157 6.38E-34 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 SMART SM00382 601 748 6.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS08380 ed805a20738d9604f12faeb48afd8927 860 SMART SM00382 199 344 9.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS07570 fe3563cf1f1923af627260804379cde0 207 SUPERFAMILY SSF53335 9 204 4.22E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07570 fe3563cf1f1923af627260804379cde0 207 Pfam PF01596 O-methyltransferase 32 203 1.1E-22 T 22-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 RM25_RS07570 fe3563cf1f1923af627260804379cde0 207 PANTHER PTHR10509 40 205 3.3E-41 T 22-04-2016 RM25_RS07570 fe3563cf1f1923af627260804379cde0 207 Gene3D G3DSA:3.40.50.150 12 205 1.1E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07570 fe3563cf1f1923af627260804379cde0 207 PANTHER PTHR10509:SF18 40 205 3.3E-41 T 22-04-2016 RM25_RS04050 dcf14f689ec2aab99d2336822d55dd47 341 SUPERFAMILY SSF52540 11 197 3.93E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04050 dcf14f689ec2aab99d2336822d55dd47 341 SUPERFAMILY SSF48019 203 321 6.63E-15 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RM25_RS04050 dcf14f689ec2aab99d2336822d55dd47 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 13 321 2.0E-40 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 RM25_RS04050 dcf14f689ec2aab99d2336822d55dd47 341 PANTHER PTHR34388 13 332 4.6E-52 T 22-04-2016 RM25_RS04050 dcf14f689ec2aab99d2336822d55dd47 341 Pfam PF06144 DNA polymerase III, delta subunit 16 178 4.1E-11 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 RM25_RS04050 dcf14f689ec2aab99d2336822d55dd47 341 Gene3D G3DSA:3.40.50.300 11 107 4.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04050 dcf14f689ec2aab99d2336822d55dd47 341 Gene3D G3DSA:1.20.272.20 213 324 2.2E-4 T 22-04-2016 RM25_RS04050 dcf14f689ec2aab99d2336822d55dd47 341 Gene3D G3DSA:1.10.8.60 135 212 6.4E-15 T 22-04-2016 RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 Gene3D G3DSA:3.40.50.300 266 492 2.9E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 Gene3D G3DSA:3.40.50.300 15 250 6.0E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 SMART SM00382 38 246 7.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 SMART SM00382 300 511 1.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 SUPERFAMILY SSF52540 16 242 4.08E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 SUPERFAMILY SSF52540 298 494 2.66E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 PANTHER PTHR24220 13 332 8.6E-74 T 22-04-2016 RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 PANTHER PTHR24220 356 417 8.6E-74 T 22-04-2016 RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 PANTHER PTHR24220:SF66 13 332 8.6E-74 T 22-04-2016 RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 PANTHER PTHR24220:SF66 356 417 8.6E-74 T 22-04-2016 RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 Pfam PF00005 ABC transporter 297 456 1.2E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS09495 2f42f482373f5d0f6e5e98220c8b0755 556 Pfam PF00005 ABC transporter 31 180 1.8E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS09170 abd664fc14600421d1030910e7960f0c 405 Pfam PF04188 Mannosyltransferase (PIG-V) 69 228 4.2E-7 T 22-04-2016 IPR007315 GPI mannosyltransferase 2 GO:0004584|GO:0006506 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.-|UniPathway: UPA00196 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 Gene3D G3DSA:1.20.80.30 112 197 9.1E-30 T 22-04-2016 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 Gene3D G3DSA:3.50.30.10 400 504 6.2E-37 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 PANTHER PTHR22931:SF9 649 885 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 4 878 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 SUPERFAMILY SSF56059 3 379 7.3E-140 T 22-04-2016 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 767 785 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 448 459 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 Gene3D G3DSA:3.20.20.60 531 880 5.5E-129 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 PANTHER PTHR22931:SF9 3 629 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 Gene3D G3DSA:3.30.470.20 244 341 7.3E-39 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 Pfam PF00391 PEP-utilising enzyme, mobile domain 420 501 1.4E-23 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 Gene3D G3DSA:1.10.189.10 342 399 6.2E-30 T 22-04-2016 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 Gene3D G3DSA:3.30.1490.20 4 111 7.1E-56 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 Gene3D G3DSA:3.30.1490.20 200 243 7.1E-56 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 PANTHER PTHR22931 649 885 0.0 T 22-04-2016 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 517 877 6.9E-89 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 PIRSF PIRSF000853 2 885 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 SUPERFAMILY SSF52009 387 506 3.53E-34 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 PANTHER PTHR22931 3 629 0.0 T 22-04-2016 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 SUPERFAMILY SSF51621 510 878 7.85E-116 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 303 355 2.0E-10 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RM25_RS01435 bbcda020f237e8634f784aa7cd6ee5d3 885 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 291 6.6E-41 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RM25_RS07360 1cd7dcf6d14d61649c570d518106a666 281 Pfam PF01553 Acyltransferase 21 151 9.0E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RM25_RS07360 1cd7dcf6d14d61649c570d518106a666 281 Gene3D G3DSA:3.40.1130.10 2 206 2.9E-24 T 22-04-2016 RM25_RS07360 1cd7dcf6d14d61649c570d518106a666 281 PANTHER PTHR10434 2 262 7.8E-56 T 22-04-2016 RM25_RS07360 1cd7dcf6d14d61649c570d518106a666 281 SMART SM00563 35 154 9.5E-27 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RM25_RS07360 1cd7dcf6d14d61649c570d518106a666 281 SUPERFAMILY SSF69593 2 216 5.23E-39 T 22-04-2016 RM25_RS07360 1cd7dcf6d14d61649c570d518106a666 281 PANTHER PTHR10434:SF21 2 262 7.8E-56 T 22-04-2016 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 Gene3D G3DSA:3.90.110.10 151 319 8.7E-49 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 PANTHER PTHR11540:SF3 2 319 4.2E-105 T 22-04-2016 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 152 318 1.0E-24 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 PANTHER PTHR11540 2 319 4.2E-105 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 SUPERFAMILY SSF56327 150 319 5.19E-43 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 15 314 9.9E-94 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 PIRSF PIRSF000102 8 321 7.0E-88 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 Gene3D G3DSA:3.40.50.720 11 150 1.2E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 179 185 - T 22-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 PRINTS PR00086 L-lactate dehydrogenase signature 37 61 1.7E-32 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 PRINTS PR00086 L-lactate dehydrogenase signature 123 143 1.7E-32 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 PRINTS PR00086 L-lactate dehydrogenase signature 177 190 1.7E-32 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 PRINTS PR00086 L-lactate dehydrogenase signature 12 36 1.7E-32 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 PRINTS PR00086 L-lactate dehydrogenase signature 147 165 1.7E-32 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 SUPERFAMILY SSF51735 8 151 1.06E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04460 a0c98af7957d161ec8524aeab97e293d 321 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 12 148 8.0E-36 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RM25_RS07485 3c1da2fedfcebb26417d8e9063b2235b 271 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 165 193 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RM25_RS07485 3c1da2fedfcebb26417d8e9063b2235b 271 Gene3D G3DSA:3.40.50.720 22 243 2.3E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07485 3c1da2fedfcebb26417d8e9063b2235b 271 Pfam PF00106 short chain dehydrogenase 21 220 7.9E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS07485 3c1da2fedfcebb26417d8e9063b2235b 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 197 4.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS07485 3c1da2fedfcebb26417d8e9063b2235b 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 216 4.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS07485 3c1da2fedfcebb26417d8e9063b2235b 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 168 4.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS07485 3c1da2fedfcebb26417d8e9063b2235b 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 4.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS07485 3c1da2fedfcebb26417d8e9063b2235b 271 PANTHER PTHR24322 178 209 2.1E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS07485 3c1da2fedfcebb26417d8e9063b2235b 271 PANTHER PTHR24322:SF333 22 153 2.1E-33 T 22-04-2016 RM25_RS07485 3c1da2fedfcebb26417d8e9063b2235b 271 PANTHER PTHR24322:SF333 178 209 2.1E-33 T 22-04-2016 RM25_RS07485 3c1da2fedfcebb26417d8e9063b2235b 271 SUPERFAMILY SSF51735 20 268 7.36E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07485 3c1da2fedfcebb26417d8e9063b2235b 271 PANTHER PTHR24322 22 153 2.1E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 PANTHER PTHR11469:SF4 1 560 5.6E-275 T 22-04-2016 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 Gene3D G3DSA:3.40.50.10490 10 97 5.3E-123 T 22-04-2016 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 Gene3D G3DSA:3.40.50.10490 304 513 5.3E-123 T 22-04-2016 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 504 521 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 472 490 5.6E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 349 370 5.6E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 504 517 5.6E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 149 168 5.6E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 490 504 5.6E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 272 290 5.6E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 Pfam PF00342 Phosphoglucose isomerase 51 549 9.9E-201 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 45 531 39.428 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 PANTHER PTHR11469 1 560 5.6E-275 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 276 289 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 Gene3D G3DSA:1.10.1390.10 514 556 2.2E-17 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 Gene3D G3DSA:3.40.50.10490 98 300 5.3E-80 T 22-04-2016 RM25_RS01930 a3aa190e5eb2012ba5bc8bd74f3abefb 560 SUPERFAMILY SSF53697 6 556 1.36E-195 T 22-04-2016 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 PANTHER PTHR19376:SF32 8 157 0.0 T 22-04-2016 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 PANTHER PTHR19376:SF32 1187 1264 0.0 T 22-04-2016 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 PANTHER PTHR19376 1187 1264 0.0 T 22-04-2016 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1251 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 PANTHER PTHR19376:SF32 213 626 0.0 T 22-04-2016 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 SUPERFAMILY SSF64484 5 1251 0.0 T 22-04-2016 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 Pfam PF04998 RNA polymerase Rpb1, domain 5 827 1199 2.5E-61 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 Pfam PF00623 RNA polymerase Rpb1, domain 2 474 560 1.5E-26 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 Pfam PF00623 RNA polymerase Rpb1, domain 2 419 460 3.3E-8 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 Gene3D G3DSA:2.40.40.20 424 451 1.3E-37 T 22-04-2016 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 Gene3D G3DSA:2.40.40.20 492 564 1.3E-37 T 22-04-2016 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 PANTHER PTHR19376 213 626 0.0 T 22-04-2016 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 PANTHER PTHR19376 8 157 0.0 T 22-04-2016 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 Pfam PF04983 RNA polymerase Rpb1, domain 3 564 720 4.2E-20 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 Pfam PF05000 RNA polymerase Rpb1, domain 4 750 824 1.4E-14 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 PANTHER PTHR19376 648 1146 0.0 T 22-04-2016 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 Pfam PF04997 RNA polymerase Rpb1, domain 1 9 417 4.4E-78 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 PANTHER PTHR19376:SF32 648 1146 0.0 T 22-04-2016 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 5 1260 9.996 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS02560 7e3391867a7d6b6119e2bf5ddf39cb2c 1296 SMART SM00663 310 589 1.7E-170 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02655 54efd5a20268ee1ca5841fe68d5afafd 91 ProSitePatterns PS00056 Ribosomal protein S17 signature. 64 76 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02655 54efd5a20268ee1ca5841fe68d5afafd 91 PANTHER PTHR10744 13 91 2.8E-33 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02655 54efd5a20268ee1ca5841fe68d5afafd 91 SUPERFAMILY SSF50249 13 90 1.93E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS02655 54efd5a20268ee1ca5841fe68d5afafd 91 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 13 83 2.0E-29 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02655 54efd5a20268ee1ca5841fe68d5afafd 91 Pfam PF00366 Ribosomal protein S17 18 84 5.6E-30 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02655 54efd5a20268ee1ca5841fe68d5afafd 91 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 11 89 23.898 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02655 54efd5a20268ee1ca5841fe68d5afafd 91 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 13 83 4.5E-34 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02655 54efd5a20268ee1ca5841fe68d5afafd 91 PRINTS PR00973 Ribosomal protein S17 family signature 74 81 4.6E-10 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02655 54efd5a20268ee1ca5841fe68d5afafd 91 PRINTS PR00973 Ribosomal protein S17 family signature 32 55 4.6E-10 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02655 54efd5a20268ee1ca5841fe68d5afafd 91 PRINTS PR00973 Ribosomal protein S17 family signature 64 74 4.6E-10 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02655 54efd5a20268ee1ca5841fe68d5afafd 91 Gene3D G3DSA:2.40.50.140 13 90 1.7E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05715 02cb6c5119424a2b1170f6608146d391 271 Gene3D G3DSA:3.40.190.80 174 267 2.4E-20 T 22-04-2016 RM25_RS05715 02cb6c5119424a2b1170f6608146d391 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 7.5E-8 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS05715 02cb6c5119424a2b1170f6608146d391 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 7.5E-8 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS05715 02cb6c5119424a2b1170f6608146d391 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 7.5E-8 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS05715 02cb6c5119424a2b1170f6608146d391 271 PANTHER PTHR20854:SF38 6 270 2.5E-78 T 22-04-2016 RM25_RS05715 02cb6c5119424a2b1170f6608146d391 271 Pfam PF00459 Inositol monophosphatase family 19 261 1.6E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS05715 02cb6c5119424a2b1170f6608146d391 271 SUPERFAMILY SSF56655 12 267 3.01E-70 T 22-04-2016 RM25_RS05715 02cb6c5119424a2b1170f6608146d391 271 Gene3D G3DSA:3.30.540.10 11 167 3.1E-42 T 22-04-2016 RM25_RS05715 02cb6c5119424a2b1170f6608146d391 271 PANTHER PTHR20854 6 270 2.5E-78 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS05715 02cb6c5119424a2b1170f6608146d391 271 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 89 102 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site RM25_RS09405 e163627ea0b0849b8d210b2f006bc470 143 SUPERFAMILY SSF52788 9 134 7.46E-34 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RM25_RS09405 e163627ea0b0849b8d210b2f006bc470 143 Gene3D G3DSA:3.40.50.270 9 134 6.4E-37 T 22-04-2016 RM25_RS09405 e163627ea0b0849b8d210b2f006bc470 143 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 12 133 2.2E-20 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RM25_RS09405 e163627ea0b0849b8d210b2f006bc470 143 PANTHER PTHR11717:SF18 7 136 1.4E-35 T 22-04-2016 RM25_RS09405 e163627ea0b0849b8d210b2f006bc470 143 SMART SM00226 10 135 2.1E-41 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RM25_RS09405 e163627ea0b0849b8d210b2f006bc470 143 PANTHER PTHR11717 7 136 1.4E-35 T 22-04-2016 RM25_RS05620 735d672baba1600a87d21890bd7769e0 283 Gene3D G3DSA:3.40.50.150 80 276 2.2E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS05620 735d672baba1600a87d21890bd7769e0 283 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 277 38.219 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RM25_RS05620 735d672baba1600a87d21890bd7769e0 283 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 20 273 8.1E-71 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RM25_RS05620 735d672baba1600a87d21890bd7769e0 283 SUPERFAMILY SSF53335 35 274 1.18E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS05620 735d672baba1600a87d21890bd7769e0 283 PANTHER PTHR18895 1 278 1.8E-75 T 22-04-2016 RM25_RS05620 735d672baba1600a87d21890bd7769e0 283 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RM25_RS05620 735d672baba1600a87d21890bd7769e0 283 PANTHER PTHR18895:SF64 1 278 1.8E-75 T 22-04-2016 RM25_RS05620 735d672baba1600a87d21890bd7769e0 283 Gene3D G3DSA:1.10.8.10 2 78 3.5E-18 T 22-04-2016 RM25_RS05620 735d672baba1600a87d21890bd7769e0 283 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 37 278 2.8E-47 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RM25_RS05620 735d672baba1600a87d21890bd7769e0 283 Pfam PF05175 Methyltransferase small domain 109 189 4.2E-12 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 SMART SM00382 326 513 9.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 SMART SM00382 26 198 1.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 SUPERFAMILY SSF52540 2 212 2.17E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 PANTHER PTHR24220 3 214 4.4E-83 T 22-04-2016 RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 PANTHER PTHR24220 261 400 4.4E-83 T 22-04-2016 RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 SUPERFAMILY SSF52540 301 527 1.93E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 Gene3D G3DSA:3.40.50.300 1 212 8.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 Gene3D G3DSA:3.40.50.300 296 527 5.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 Pfam PF00005 ABC transporter 317 467 3.7E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 Pfam PF00005 ABC transporter 17 151 3.5E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 PANTHER PTHR24220:SF0 3 214 4.4E-83 T 22-04-2016 RM25_RS00670 2bbe17e62a35e0613b1a32e297d348bd 605 PANTHER PTHR24220:SF0 261 400 4.4E-83 T 22-04-2016 RM25_RS06345 2910802cfc67fcdd12db5af7ad25ff9b 337 PANTHER PTHR12358:SF43 22 337 9.8E-38 T 22-04-2016 RM25_RS06345 2910802cfc67fcdd12db5af7ad25ff9b 337 PANTHER PTHR12358 22 337 9.8E-38 T 22-04-2016 RM25_RS06345 2910802cfc67fcdd12db5af7ad25ff9b 337 SUPERFAMILY SSF111331 20 330 4.58E-54 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RM25_RS06345 2910802cfc67fcdd12db5af7ad25ff9b 337 Pfam PF00781 Diacylglycerol kinase catalytic domain 23 153 4.5E-15 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RM25_RS06345 2910802cfc67fcdd12db5af7ad25ff9b 337 Gene3D G3DSA:3.40.50.10330 43 120 5.5E-5 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RM25_RS11305 45eb3b3e03f4011a3dbecd599efd495c 271 PIRSF PIRSF003073 21 271 1.2E-81 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RM25_RS11305 45eb3b3e03f4011a3dbecd599efd495c 271 Pfam PF01695 IstB-like ATP binding protein 77 253 1.7E-55 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 RM25_RS11305 45eb3b3e03f4011a3dbecd599efd495c 271 Gene3D G3DSA:3.40.50.300 89 249 1.2E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11305 45eb3b3e03f4011a3dbecd599efd495c 271 PANTHER PTHR30050 15 269 1.8E-57 T 22-04-2016 RM25_RS11305 45eb3b3e03f4011a3dbecd599efd495c 271 PANTHER PTHR30050:SF6 15 269 1.8E-57 T 22-04-2016 RM25_RS11305 45eb3b3e03f4011a3dbecd599efd495c 271 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 122 142 9.5E-8 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RM25_RS11305 45eb3b3e03f4011a3dbecd599efd495c 271 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 184 198 9.5E-8 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RM25_RS11305 45eb3b3e03f4011a3dbecd599efd495c 271 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 152 166 9.5E-8 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RM25_RS11305 45eb3b3e03f4011a3dbecd599efd495c 271 SUPERFAMILY SSF52540 90 249 1.27E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11305 45eb3b3e03f4011a3dbecd599efd495c 271 SMART SM00382 121 254 2.8E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS10025 f82ff042568785fba57fff3d006c3219 350 Pfam PF12857 TOBE-like domain 255 312 3.0E-7 T 22-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 RM25_RS10025 f82ff042568785fba57fff3d006c3219 350 PANTHER PTHR24220:SF123 4 275 4.2E-125 T 22-04-2016 RM25_RS10025 f82ff042568785fba57fff3d006c3219 350 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS10025 f82ff042568785fba57fff3d006c3219 350 SUPERFAMILY SSF50331 243 310 3.57E-5 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RM25_RS10025 f82ff042568785fba57fff3d006c3219 350 SUPERFAMILY SSF52540 3 238 1.39E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10025 f82ff042568785fba57fff3d006c3219 350 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 238 1.5E-116 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 RM25_RS10025 f82ff042568785fba57fff3d006c3219 350 SMART SM00382 27 210 3.5E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS10025 f82ff042568785fba57fff3d006c3219 350 Gene3D G3DSA:3.40.50.300 2 233 2.2E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10025 f82ff042568785fba57fff3d006c3219 350 Pfam PF00005 ABC transporter 18 160 8.9E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS10025 f82ff042568785fba57fff3d006c3219 350 PANTHER PTHR24220 4 275 4.2E-125 T 22-04-2016 RM25_RS04290 2193ca05321b4ccd0c725d329c3d3998 327 PIRSF PIRSF005303 11 323 9.6E-82 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RM25_RS04290 2193ca05321b4ccd0c725d329c3d3998 327 Pfam PF00586 AIR synthase related protein, N-terminal domain 41 150 1.4E-21 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RM25_RS04290 2193ca05321b4ccd0c725d329c3d3998 327 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 17 323 9.1E-73 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RM25_RS04290 2193ca05321b4ccd0c725d329c3d3998 327 Gene3D G3DSA:3.30.1330.10 12 151 3.7E-39 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RM25_RS04290 2193ca05321b4ccd0c725d329c3d3998 327 Gene3D G3DSA:3.90.650.10 158 323 3.8E-45 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RM25_RS04290 2193ca05321b4ccd0c725d329c3d3998 327 SUPERFAMILY SSF55326 13 150 1.47E-30 T 22-04-2016 RM25_RS04290 2193ca05321b4ccd0c725d329c3d3998 327 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 16 320 27.144 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RM25_RS04290 2193ca05321b4ccd0c725d329c3d3998 327 Pfam PF02769 AIR synthase related protein, C-terminal domain 163 268 5.8E-6 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RM25_RS04290 2193ca05321b4ccd0c725d329c3d3998 327 SUPERFAMILY SSF56042 156 308 1.03E-27 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RM25_RS04290 2193ca05321b4ccd0c725d329c3d3998 327 PANTHER PTHR30270:SF0 1 324 3.6E-83 T 22-04-2016 RM25_RS04290 2193ca05321b4ccd0c725d329c3d3998 327 PANTHER PTHR30270 1 324 3.6E-83 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RM25_RS08875 816969966309d9d49559936a4275de74 352 Hamap MF_00323 Ferrochelatase [hemH]. 3 311 29.071 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RM25_RS08875 816969966309d9d49559936a4275de74 352 TIGRFAM TIGR00109 hemH: ferrochelatase 25 310 3.0E-39 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RM25_RS08875 816969966309d9d49559936a4275de74 352 Gene3D G3DSA:3.40.50.1400 180 311 7.7E-40 T 22-04-2016 RM25_RS08875 816969966309d9d49559936a4275de74 352 Gene3D G3DSA:3.40.50.1400 5 179 9.8E-32 T 22-04-2016 RM25_RS08875 816969966309d9d49559936a4275de74 352 PANTHER PTHR11108 6 311 5.9E-62 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RM25_RS08875 816969966309d9d49559936a4275de74 352 ProSitePatterns PS00534 Ferrochelatase signature. 173 195 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RM25_RS08875 816969966309d9d49559936a4275de74 352 Pfam PF00762 Ferrochelatase 5 309 1.4E-78 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RM25_RS08875 816969966309d9d49559936a4275de74 352 SUPERFAMILY SSF53800 3 336 1.34E-69 T 22-04-2016 RM25_RS10970 9343e0b57448e32aaf8220663261e9d3 471 Gene3D G3DSA:3.40.640.10 81 330 7.8E-28 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS10970 9343e0b57448e32aaf8220663261e9d3 471 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 27 453 3.1E-194 T 22-04-2016 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 RM25_RS10970 9343e0b57448e32aaf8220663261e9d3 471 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 47 387 1.2E-75 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 RM25_RS10970 9343e0b57448e32aaf8220663261e9d3 471 PANTHER PTHR11999:SF99 34 466 3.0E-199 T 22-04-2016 RM25_RS10970 9343e0b57448e32aaf8220663261e9d3 471 SUPERFAMILY SSF53383 25 449 1.49E-129 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS10970 9343e0b57448e32aaf8220663261e9d3 471 PANTHER PTHR11999 34 466 3.0E-199 T 22-04-2016 RM25_RS06970 85ab47403eaf153701cce94ba68df61c 150 Gene3D G3DSA:3.90.1010.10 5 142 3.6E-42 T 22-04-2016 RM25_RS06970 85ab47403eaf153701cce94ba68df61c 150 PANTHER PTHR10093 4 88 1.2E-33 T 22-04-2016 RM25_RS06970 85ab47403eaf153701cce94ba68df61c 150 PANTHER PTHR10093 104 140 1.2E-33 T 22-04-2016 RM25_RS06970 85ab47403eaf153701cce94ba68df61c 150 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 4 139 1.6E-51 T 22-04-2016 RM25_RS06970 85ab47403eaf153701cce94ba68df61c 150 Pfam PF01592 NifU-like N terminal domain 6 127 9.9E-24 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 RM25_RS06970 85ab47403eaf153701cce94ba68df61c 150 SUPERFAMILY SSF82649 2 140 1.05E-45 T 22-04-2016 RM25_RS04890 582ceeb7193fc339dda9d61f3b07a4a1 263 PANTHER PTHR24220:SF534 3 233 8.6E-104 T 22-04-2016 RM25_RS04890 582ceeb7193fc339dda9d61f3b07a4a1 263 SUPERFAMILY SSF52540 2 232 9.67E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04890 582ceeb7193fc339dda9d61f3b07a4a1 263 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS04890 582ceeb7193fc339dda9d61f3b07a4a1 263 PANTHER PTHR24220 3 233 8.6E-104 T 22-04-2016 RM25_RS04890 582ceeb7193fc339dda9d61f3b07a4a1 263 SMART SM00382 31 233 1.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS04890 582ceeb7193fc339dda9d61f3b07a4a1 263 Gene3D G3DSA:3.40.50.300 1 233 6.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04890 582ceeb7193fc339dda9d61f3b07a4a1 263 Pfam PF00005 ABC transporter 22 177 1.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS07105 e0c4f8c8dd18a97e996b8b40e3b63b38 439 SUPERFAMILY SSF55874 342 437 1.88E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS07105 e0c4f8c8dd18a97e996b8b40e3b63b38 439 PANTHER PTHR24421 60 170 2.2E-57 T 22-04-2016 RM25_RS07105 e0c4f8c8dd18a97e996b8b40e3b63b38 439 Pfam PF07730 Histidine kinase 232 297 1.8E-17 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RM25_RS07105 e0c4f8c8dd18a97e996b8b40e3b63b38 439 PANTHER PTHR24421:SF26 227 438 2.2E-57 T 22-04-2016 RM25_RS07105 e0c4f8c8dd18a97e996b8b40e3b63b38 439 Gene3D G3DSA:3.30.565.10 396 438 2.2E-4 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS07105 e0c4f8c8dd18a97e996b8b40e3b63b38 439 SMART SM00387 346 438 0.0011 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS07105 e0c4f8c8dd18a97e996b8b40e3b63b38 439 PANTHER PTHR24421 227 438 2.2E-57 T 22-04-2016 RM25_RS07105 e0c4f8c8dd18a97e996b8b40e3b63b38 439 PANTHER PTHR24421:SF26 60 170 2.2E-57 T 22-04-2016 RM25_RS01695 4d077d34b1233b122f726989be7b720a 399 TIGRFAM TIGR02570 cas7_GSU0053: CRISPR-associated protein GSU0053/csb1, Dpsyc system 27 186 2.0E-11 T 22-04-2016 IPR013403 CRISPR-associated protein GSU0053 RM25_RS01695 4d077d34b1233b122f726989be7b720a 399 Pfam PF09617 CRISPR-associated protein GSU0053 (Cas_GSU0053) 24 188 3.7E-33 T 22-04-2016 IPR013403 CRISPR-associated protein GSU0053 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 Pfam PF12705 PD-(D/E)XK nuclease superfamily 897 1067 1.3E-7 T 22-04-2016 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 PANTHER PTHR11070:SF5 740 1107 1.8E-126 T 22-04-2016 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 PANTHER PTHR11070:SF5 638 703 1.8E-126 T 22-04-2016 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 PANTHER PTHR11070:SF5 215 578 1.8E-126 T 22-04-2016 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 PANTHER PTHR11070:SF5 1 190 1.8E-126 T 22-04-2016 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 Pfam PF13361 UvrD-like helicase C-terminal domain 343 762 9.8E-31 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 SUPERFAMILY SSF52980 910 1048 4.24E-5 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 Gene3D G3DSA:1.10.486.10 543 642 2.1E-11 T 22-04-2016 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 Gene3D G3DSA:1.10.486.10 464 508 2.1E-11 T 22-04-2016 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 SUPERFAMILY SSF52540 741 766 2.13E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 SUPERFAMILY SSF52540 217 499 2.13E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 SUPERFAMILY SSF52540 548 700 2.13E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 SUPERFAMILY SSF52540 18 188 2.13E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 PANTHER PTHR11070 740 1107 1.8E-126 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 PANTHER PTHR11070 638 703 1.8E-126 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 PANTHER PTHR11070 215 578 1.8E-126 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 PANTHER PTHR11070 1 190 1.8E-126 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 Pfam PF00580 UvrD/REP helicase N-terminal domain 21 332 8.9E-47 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 Gene3D G3DSA:3.40.50.300 227 335 6.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 Gene3D G3DSA:3.40.50.300 184 185 6.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 Gene3D G3DSA:3.40.50.300 20 151 6.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 Gene3D G3DSA:3.40.50.300 663 698 9.3E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 Gene3D G3DSA:3.40.50.300 737 780 9.3E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05870 ec0865a730abcd9a12840879dee14395 1118 Gene3D G3DSA:3.40.50.300 347 463 9.3E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 SUPERFAMILY SSF56014 408 556 2.22E-32 T 22-04-2016 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 334 399 6.6E-11 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 90 149 7.7E-11 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 SUPERFAMILY SSF55124 8 156 1.29E-30 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 PRINTS PR00397 Sirohaem Fe-binding site signature 458 476 1.5E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 PRINTS PR00397 Sirohaem Fe-binding site signature 411 429 1.5E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 410 537 2.2E-10 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 159 314 1.2E-35 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 PANTHER PTHR32439 9 556 9.2E-171 T 22-04-2016 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 Gene3D G3DSA:3.90.480.10 327 403 2.5E-40 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 Gene3D G3DSA:3.90.480.10 87 156 2.5E-40 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 458 474 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 PANTHER PTHR32439:SF0 9 556 9.2E-171 T 22-04-2016 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 Gene3D G3DSA:3.30.413.10 408 555 1.2E-32 T 22-04-2016 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 Gene3D G3DSA:3.30.413.10 159 317 2.0E-40 T 22-04-2016 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 SUPERFAMILY SSF56014 159 318 4.71E-43 T 22-04-2016 RM25_RS10045 525bc5e784b4901d47ec15c75e437978 556 SUPERFAMILY SSF55124 291 422 1.39E-17 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RM25_RS12135 23f79bcadf2e952b090086663ca714b4 591 SUPERFAMILY SSF82689 193 287 1.31E-7 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RM25_RS12135 23f79bcadf2e952b090086663ca714b4 591 Gene3D G3DSA:2.30.30.60 143 187 5.1E-11 T 22-04-2016 RM25_RS12135 23f79bcadf2e952b090086663ca714b4 591 SUPERFAMILY SSF50182 128 187 7.19E-11 T 22-04-2016 IPR010920 LSM domain RM25_RS12135 23f79bcadf2e952b090086663ca714b4 591 PANTHER PTHR30460 12 316 9.6E-77 T 22-04-2016 RM25_RS12135 23f79bcadf2e952b090086663ca714b4 591 SUPERFAMILY SSF82861 71 126 1.57E-10 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RM25_RS12135 23f79bcadf2e952b090086663ca714b4 591 Pfam PF00924 Mechanosensitive ion channel 86 284 4.8E-36 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RM25_RS05090 c40e982ce9ac953a97f6eb4f4818190e 474 PANTHER PTHR13779 33 462 9.4E-176 T 22-04-2016 RM25_RS05090 c40e982ce9ac953a97f6eb4f4818190e 474 Gene3D G3DSA:1.20.272.10 269 367 4.9E-45 T 22-04-2016 RM25_RS05090 c40e982ce9ac953a97f6eb4f4818190e 474 PANTHER PTHR13779:SF7 33 462 9.4E-176 T 22-04-2016 RM25_RS05090 c40e982ce9ac953a97f6eb4f4818190e 474 SUPERFAMILY SSF52540 34 253 4.21E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05090 c40e982ce9ac953a97f6eb4f4818190e 474 Gene3D G3DSA:1.10.3710.10 368 461 7.8E-30 T 22-04-2016 RM25_RS05090 c40e982ce9ac953a97f6eb4f4818190e 474 SUPERFAMILY SSF48019 273 456 1.08E-74 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RM25_RS05090 c40e982ce9ac953a97f6eb4f4818190e 474 Gene3D G3DSA:3.40.50.300 34 177 1.9E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05090 c40e982ce9ac953a97f6eb4f4818190e 474 SMART SM00382 69 185 9.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS05090 c40e982ce9ac953a97f6eb4f4818190e 474 Gene3D G3DSA:1.10.8.60 214 261 3.6E-7 T 22-04-2016 RM25_RS05090 c40e982ce9ac953a97f6eb4f4818190e 474 Pfam PF12002 MgsA AAA+ ATPase C terminal 288 453 8.9E-70 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal RM25_RS05090 c40e982ce9ac953a97f6eb4f4818190e 474 Pfam PF16193 AAA C-terminal domain 210 287 2.1E-25 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain RM25_RS05090 c40e982ce9ac953a97f6eb4f4818190e 474 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 38 160 2.8E-14 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RM25_RS03595 0d70c298d53663410013685c4ef96803 294 SUPERFAMILY SSF53790 20 270 1.03E-60 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS03595 0d70c298d53663410013685c4ef96803 294 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 23 230 4.9E-35 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS03595 0d70c298d53663410013685c4ef96803 294 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 24 272 2.1E-104 T 22-04-2016 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 RM25_RS03595 0d70c298d53663410013685c4ef96803 294 PANTHER PTHR21091 20 230 8.7E-49 T 22-04-2016 RM25_RS03595 0d70c298d53663410013685c4ef96803 294 Gene3D G3DSA:3.40.1010.10 22 131 2.0E-26 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RM25_RS03595 0d70c298d53663410013685c4ef96803 294 Gene3D G3DSA:3.30.950.10 132 252 2.0E-29 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RM25_RS03595 0d70c298d53663410013685c4ef96803 294 PANTHER PTHR21091:SF17 20 230 8.7E-49 T 22-04-2016 RM25_RS11605 d452820515ffc39b9cf14bed76c3af1f 218 PANTHER PTHR20953:SF0 71 217 3.1E-55 T 22-04-2016 RM25_RS11605 d452820515ffc39b9cf14bed76c3af1f 218 Gene3D G3DSA:3.30.300.120 73 149 2.1E-17 T 22-04-2016 RM25_RS11605 d452820515ffc39b9cf14bed76c3af1f 218 Pfam PF01424 R3H domain 159 215 4.7E-16 T 22-04-2016 IPR001374 R3H domain GO:0003676 RM25_RS11605 d452820515ffc39b9cf14bed76c3af1f 218 SUPERFAMILY SSF82708 171 216 5.89E-11 T 22-04-2016 IPR001374 R3H domain GO:0003676 RM25_RS11605 d452820515ffc39b9cf14bed76c3af1f 218 PANTHER PTHR20953 71 217 3.1E-55 T 22-04-2016 RM25_RS11605 d452820515ffc39b9cf14bed76c3af1f 218 Gene3D G3DSA:3.30.1370.50 150 218 6.7E-25 T 22-04-2016 IPR001374 R3H domain GO:0003676 RM25_RS11605 d452820515ffc39b9cf14bed76c3af1f 218 SMART SM00393 139 217 1.1E-24 T 22-04-2016 IPR001374 R3H domain GO:0003676 RM25_RS08785 d160102744b685b36acdc3f58762a9b0 163 Pfam PF02542 YgbB family 8 159 5.7E-45 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS08785 d160102744b685b36acdc3f58762a9b0 163 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 43 58 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS08785 d160102744b685b36acdc3f58762a9b0 163 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 8 161 30.017 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS08785 d160102744b685b36acdc3f58762a9b0 163 Gene3D G3DSA:3.30.1330.50 7 160 6.3E-52 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS08785 d160102744b685b36acdc3f58762a9b0 163 SUPERFAMILY SSF69765 8 160 2.09E-47 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS08785 d160102744b685b36acdc3f58762a9b0 163 PANTHER PTHR32125 8 159 3.4E-24 T 22-04-2016 RM25_RS08785 d160102744b685b36acdc3f58762a9b0 163 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 9 160 2.5E-43 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS00725 796211c0c84298c720c146c11b8ace5e 464 PANTHER PTHR11203:SF11 127 464 2.6E-99 T 22-04-2016 RM25_RS00725 796211c0c84298c720c146c11b8ace5e 464 PANTHER PTHR11203:SF11 7 110 2.6E-99 T 22-04-2016 RM25_RS00725 796211c0c84298c720c146c11b8ace5e 464 SMART SM00849 18 245 1.5E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS00725 796211c0c84298c720c146c11b8ace5e 464 PANTHER PTHR11203 127 464 2.6E-99 T 22-04-2016 RM25_RS00725 796211c0c84298c720c146c11b8ace5e 464 PANTHER PTHR11203 7 110 2.6E-99 T 22-04-2016 RM25_RS00725 796211c0c84298c720c146c11b8ace5e 464 SMART SM01027 257 379 5.1E-40 T 22-04-2016 IPR022712 Beta-Casp domain RM25_RS00725 796211c0c84298c720c146c11b8ace5e 464 SUPERFAMILY SSF56281 7 464 4.06E-117 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS00725 796211c0c84298c720c146c11b8ace5e 464 Gene3D G3DSA:3.60.15.10 8 105 1.4E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS00725 796211c0c84298c720c146c11b8ace5e 464 Gene3D G3DSA:3.60.15.10 140 264 1.4E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS00725 796211c0c84298c720c146c11b8ace5e 464 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 392 455 6.3E-14 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RM25_RS00725 796211c0c84298c720c146c11b8ace5e 464 Pfam PF10996 Beta-Casp domain 263 379 4.1E-24 T 22-04-2016 IPR022712 Beta-Casp domain RM25_RS00725 796211c0c84298c720c146c11b8ace5e 464 Pfam PF00753 Metallo-beta-lactamase superfamily 22 244 2.0E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS06510 57020a5b53d98f8d94f0628283d879e8 343 Gene3D G3DSA:3.30.360.10 155 311 8.7E-49 T 22-04-2016 RM25_RS06510 57020a5b53d98f8d94f0628283d879e8 343 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 5 343 3.3E-103 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS06510 57020a5b53d98f8d94f0628283d879e8 343 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 337 35.641 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS06510 57020a5b53d98f8d94f0628283d879e8 343 Gene3D G3DSA:3.40.50.720 2 154 3.2E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06510 57020a5b53d98f8d94f0628283d879e8 343 PANTHER PTHR32338:SF8 5 343 1.6E-126 T 22-04-2016 RM25_RS06510 57020a5b53d98f8d94f0628283d879e8 343 SMART SM00859 4 136 1.4E-34 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RM25_RS06510 57020a5b53d98f8d94f0628283d879e8 343 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 129 1.1E-22 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RM25_RS06510 57020a5b53d98f8d94f0628283d879e8 343 SUPERFAMILY SSF55347 146 310 1.39E-41 T 22-04-2016 RM25_RS06510 57020a5b53d98f8d94f0628283d879e8 343 SUPERFAMILY SSF51735 3 174 6.76E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06510 57020a5b53d98f8d94f0628283d879e8 343 PANTHER PTHR32338 5 343 1.6E-126 T 22-04-2016 RM25_RS06510 57020a5b53d98f8d94f0628283d879e8 343 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 157 314 4.8E-16 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS02060 630a3e94d52c4b5e747d8d4acdc67464 297 PANTHER PTHR24220 6 229 3.8E-69 T 22-04-2016 RM25_RS02060 630a3e94d52c4b5e747d8d4acdc67464 297 Pfam PF00005 ABC transporter 21 169 4.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS02060 630a3e94d52c4b5e747d8d4acdc67464 297 PANTHER PTHR24220:SF66 6 229 3.8E-69 T 22-04-2016 RM25_RS02060 630a3e94d52c4b5e747d8d4acdc67464 297 SMART SM00382 30 217 3.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS02060 630a3e94d52c4b5e747d8d4acdc67464 297 SUPERFAMILY SSF52540 5 230 3.86E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02060 630a3e94d52c4b5e747d8d4acdc67464 297 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 14 203 2.7E-92 T 22-04-2016 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 RM25_RS02060 630a3e94d52c4b5e747d8d4acdc67464 297 Gene3D G3DSA:3.40.50.300 3 231 1.6E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 Pfam PF14579 Helix-hairpin-helix motif 841 929 9.1E-23 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 SMART SM00481 7 80 1.3E-26 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 327 767 6.2E-155 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1068 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 PANTHER PTHR32294 110 1190 0.0 T 22-04-2016 RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 PANTHER PTHR32294 2 92 0.0 T 22-04-2016 RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 PANTHER PTHR32294:SF0 110 1190 0.0 T 22-04-2016 RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 PANTHER PTHR32294:SF0 2 92 0.0 T 22-04-2016 RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 Gene3D G3DSA:3.20.20.140 6 285 1.7E-41 T 22-04-2016 RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 SUPERFAMILY SSF89550 6 98 1.18E-27 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 SUPERFAMILY SSF89550 133 296 1.18E-27 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 Pfam PF02811 PHP domain 8 206 3.2E-47 T 22-04-2016 IPR004013 PHP domain GO:0003824 RM25_RS04965 7e1102dcff5fe37f08883e8f5e85fc14 1190 Pfam PF01336 OB-fold nucleic acid binding domain 1033 1107 5.9E-9 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RM25_RS10175 36bbfabab89ed0a6cef1efb8e7a185f8 145 Gene3D G3DSA:3.30.70.640 1 141 3.2E-52 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RM25_RS10175 36bbfabab89ed0a6cef1efb8e7a185f8 145 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 1 136 7.4E-48 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 RM25_RS10175 36bbfabab89ed0a6cef1efb8e7a185f8 145 Pfam PF01967 MoaC family 1 134 2.2E-45 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RM25_RS10175 36bbfabab89ed0a6cef1efb8e7a185f8 145 PANTHER PTHR22960 1 142 1.8E-65 T 22-04-2016 RM25_RS10175 36bbfabab89ed0a6cef1efb8e7a185f8 145 SUPERFAMILY SSF55040 1 139 2.35E-47 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 SUPERFAMILY SSF57783 4 99 5.1E-31 T 22-04-2016 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 Gene3D G3DSA:1.20.50.20 372 429 3.1E-8 T 22-04-2016 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 Gene3D G3DSA:3.90.980.10 116 239 1.8E-32 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 PIRSF PIRSF002811 2 612 6.6E-141 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 Pfam PF01807 CHC2 zinc finger 6 100 8.1E-32 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 3.5E-31 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 TIGRFAM TIGR01391 dnaG: DNA primase 5 421 1.0E-103 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 SUPERFAMILY SSF56731 116 426 3.66E-84 T 22-04-2016 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 Pfam PF10410 DnaB-helicase binding domain of primase 374 428 4.0E-12 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 SMART SM00493 259 337 1.6E-9 T 22-04-2016 IPR006171 Toprim domain RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 Gene3D G3DSA:3.90.580.10 2 98 6.3E-35 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 Hamap MF_00974 DNA primase [dnaG]. 4 605 24.78 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 SMART SM00766 478 600 6.5E-7 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 Pfam PF13662 Toprim domain 261 332 4.2E-16 T 22-04-2016 IPR006171 Toprim domain RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 Gene3D G3DSA:3.40.1360.10 241 369 8.7E-38 T 22-04-2016 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 PANTHER PTHR30313 3 440 1.5E-113 T 22-04-2016 RM25_RS04840 4e93b82fc47a06f91364af504e2682cf 622 SMART SM00400 37 91 3.6E-32 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RM25_RS07450 900dfdeb6dc5d000045caf45a00863ba 373 Gene3D G3DSA:3.30.70.1400 61 141 9.2E-23 T 22-04-2016 RM25_RS07450 900dfdeb6dc5d000045caf45a00863ba 373 Gene3D G3DSA:2.40.30.110 287 371 7.3E-21 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RM25_RS07450 900dfdeb6dc5d000045caf45a00863ba 373 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 8 369 1.0E-94 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RM25_RS07450 900dfdeb6dc5d000045caf45a00863ba 373 Gene3D G3DSA:3.30.1360.120 148 240 5.8E-47 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RM25_RS07450 900dfdeb6dc5d000045caf45a00863ba 373 Gene3D G3DSA:3.30.1360.120 9 60 5.8E-47 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RM25_RS07450 900dfdeb6dc5d000045caf45a00863ba 373 PANTHER PTHR13847 1 368 8.5E-44 T 22-04-2016 RM25_RS07450 900dfdeb6dc5d000045caf45a00863ba 373 Pfam PF01571 Aminomethyltransferase folate-binding domain 14 263 3.1E-80 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RM25_RS07450 900dfdeb6dc5d000045caf45a00863ba 373 SUPERFAMILY SSF101790 278 371 2.13E-20 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RM25_RS07450 900dfdeb6dc5d000045caf45a00863ba 373 PANTHER PTHR13847:SF209 1 368 8.5E-44 T 22-04-2016 RM25_RS07450 900dfdeb6dc5d000045caf45a00863ba 373 PIRSF PIRSF006487 1 373 2.0E-86 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RM25_RS07450 900dfdeb6dc5d000045caf45a00863ba 373 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 270 364 3.2E-16 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RM25_RS07450 900dfdeb6dc5d000045caf45a00863ba 373 SUPERFAMILY SSF103025 8 282 3.61E-87 T 22-04-2016 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 Gene3D G3DSA:1.20.1270.10 505 577 1.5E-20 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 SUPERFAMILY SSF100934 480 588 9.61E-13 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 PANTHER PTHR19375 2 622 0.0 T 22-04-2016 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 Gene3D G3DSA:3.90.640.10 202 287 1.1E-28 T 22-04-2016 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 Pfam PF00012 Hsp70 protein 4 79 2.2E-29 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 Pfam PF00012 Hsp70 protein 83 577 2.3E-210 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 Gene3D G3DSA:3.30.420.40 4 38 2.7E-56 T 22-04-2016 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 Gene3D G3DSA:3.30.420.40 101 166 2.7E-56 T 22-04-2016 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 SUPERFAMILY SSF53067 162 355 1.35E-62 T 22-04-2016 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 PANTHER PTHR19375:SF173 2 622 0.0 T 22-04-2016 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 SUPERFAMILY SSF100920 357 513 1.26E-61 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 616 36.239 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 SUPERFAMILY SSF53067 3 159 1.14E-57 T 22-04-2016 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 4 577 1.4E-277 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 Gene3D G3DSA:2.60.34.10 363 504 7.2E-72 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 Gene3D G3DSA:3.30.420.40 291 333 2.3E-34 T 22-04-2016 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 Gene3D G3DSA:3.30.420.40 167 201 2.3E-34 T 22-04-2016 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 Gene3D G3DSA:3.30.30.30 39 100 3.4E-17 T 22-04-2016 RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 PRINTS PR00301 70kDa heat shock protein signature 174 184 1.1E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 PRINTS PR00301 70kDa heat shock protein signature 338 358 1.1E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.1E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.1E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.1E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 PRINTS PR00301 70kDa heat shock protein signature 306 322 1.1E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 PRINTS PR00301 70kDa heat shock protein signature 114 134 1.1E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 PRINTS PR00301 70kDa heat shock protein signature 442 458 1.1E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS02095 85cd81ee2de923fd4f6065156271d7ca 624 PRINTS PR00301 70kDa heat shock protein signature 361 380 1.1E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS00210 686a8951e6bc021949cc22d4f3ad6117 655 PANTHER PTHR24221:SF161 24 351 6.2E-74 T 22-04-2016 RM25_RS00210 686a8951e6bc021949cc22d4f3ad6117 655 PANTHER PTHR24221:SF161 409 649 6.2E-74 T 22-04-2016 RM25_RS00210 686a8951e6bc021949cc22d4f3ad6117 655 Pfam PF00005 ABC transporter 438 581 3.1E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS00210 686a8951e6bc021949cc22d4f3ad6117 655 Pfam PF00664 ABC transporter transmembrane region 42 299 2.4E-10 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS00210 686a8951e6bc021949cc22d4f3ad6117 655 SUPERFAMILY SSF90123 33 336 3.4E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS00210 686a8951e6bc021949cc22d4f3ad6117 655 SMART SM00382 447 635 1.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS00210 686a8951e6bc021949cc22d4f3ad6117 655 SUPERFAMILY SSF52540 418 651 1.08E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00210 686a8951e6bc021949cc22d4f3ad6117 655 PANTHER PTHR24221 24 351 6.2E-74 T 22-04-2016 RM25_RS00210 686a8951e6bc021949cc22d4f3ad6117 655 PANTHER PTHR24221 409 649 6.2E-74 T 22-04-2016 RM25_RS00210 686a8951e6bc021949cc22d4f3ad6117 655 Gene3D G3DSA:3.40.50.300 422 653 2.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00210 686a8951e6bc021949cc22d4f3ad6117 655 Gene3D G3DSA:1.20.1560.10 36 336 2.4E-43 T 22-04-2016 RM25_RS09875 ad8a1a78975d2d547174db3d1ba3ed7f 335 Pfam PF13519 von Willebrand factor type A domain 74 188 2.7E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS09875 ad8a1a78975d2d547174db3d1ba3ed7f 335 SUPERFAMILY SSF53300 72 259 2.07E-16 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS09875 ad8a1a78975d2d547174db3d1ba3ed7f 335 Gene3D G3DSA:3.40.50.410 72 258 3.8E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS09875 ad8a1a78975d2d547174db3d1ba3ed7f 335 SMART SM00327 71 248 3.5E-8 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS03405 3b14d3d944aaeb995bb19358168a6919 376 PANTHER PTHR11609:SF5 1 356 2.5E-104 T 22-04-2016 RM25_RS03405 3b14d3d944aaeb995bb19358168a6919 376 Gene3D G3DSA:3.30.1490.20 103 138 1.3E-12 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RM25_RS03405 3b14d3d944aaeb995bb19358168a6919 376 PANTHER PTHR11609 1 356 2.5E-104 T 22-04-2016 RM25_RS03405 3b14d3d944aaeb995bb19358168a6919 376 Gene3D G3DSA:3.40.50.20 1 92 4.3E-22 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RM25_RS03405 3b14d3d944aaeb995bb19358168a6919 376 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 1 350 32.318 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RM25_RS03405 3b14d3d944aaeb995bb19358168a6919 376 Pfam PF02222 ATP-grasp domain 97 272 1.2E-45 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 RM25_RS03405 3b14d3d944aaeb995bb19358168a6919 376 SUPERFAMILY SSF52440 1 81 1.58E-17 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RM25_RS03405 3b14d3d944aaeb995bb19358168a6919 376 SUPERFAMILY SSF51246 297 366 2.98E-12 T 22-04-2016 IPR011054 Rudiment single hybrid motif RM25_RS03405 3b14d3d944aaeb995bb19358168a6919 376 Gene3D G3DSA:3.30.470.20 139 365 5.1E-75 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RM25_RS03405 3b14d3d944aaeb995bb19358168a6919 376 SUPERFAMILY SSF56059 86 290 5.66E-55 T 22-04-2016 RM25_RS03750 901879e200a1a2b533af578748e266cf 506 SUPERFAMILY SSF52009 389 495 2.49E-12 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RM25_RS03750 901879e200a1a2b533af578748e266cf 506 Gene3D G3DSA:1.10.274.10 307 406 7.5E-17 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RM25_RS03750 901879e200a1a2b533af578748e266cf 506 PANTHER PTHR38594 1 134 4.2E-31 T 22-04-2016 RM25_RS03750 901879e200a1a2b533af578748e266cf 506 Pfam PF00381 PTS HPr component phosphorylation site 178 255 1.6E-15 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RM25_RS03750 901879e200a1a2b533af578748e266cf 506 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 4 125 5.6E-31 T 22-04-2016 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain RM25_RS03750 901879e200a1a2b533af578748e266cf 506 SUPERFAMILY SSF53062 1 127 1.38E-27 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RM25_RS03750 901879e200a1a2b533af578748e266cf 506 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 185 192 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RM25_RS03750 901879e200a1a2b533af578748e266cf 506 Pfam PF03610 PTS system fructose IIA component 4 114 1.0E-21 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RM25_RS03750 901879e200a1a2b533af578748e266cf 506 Pfam PF00391 PEP-utilising enzyme, mobile domain 433 495 7.1E-10 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RM25_RS03750 901879e200a1a2b533af578748e266cf 506 SUPERFAMILY SSF47831 307 418 1.44E-16 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RM25_RS03750 901879e200a1a2b533af578748e266cf 506 SUPERFAMILY SSF55594 177 262 1.96E-14 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RM25_RS03750 901879e200a1a2b533af578748e266cf 506 Pfam PF05524 PEP-utilising enzyme, N-terminal 293 401 4.3E-14 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RM25_RS03750 901879e200a1a2b533af578748e266cf 506 Gene3D G3DSA:3.50.30.10 407 495 1.5E-13 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RM25_RS03750 901879e200a1a2b533af578748e266cf 506 Gene3D G3DSA:3.40.50.510 1 130 2.4E-40 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RM25_RS03750 901879e200a1a2b533af578748e266cf 506 Gene3D G3DSA:3.30.1340.10 178 259 1.3E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 PANTHER PTHR11451:SF5 32 667 1.0E-243 T 22-04-2016 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 Gene3D G3DSA:3.30.930.10 255 560 1.1E-97 T 22-04-2016 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 SUPERFAMILY SSF52954 559 664 5.59E-28 T 22-04-2016 IPR004154 Anticodon-binding RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 SUPERFAMILY SSF55186 63 254 1.83E-51 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 PRINTS PR01047 Threonyl-tRNA synthetase signature 356 384 1.2E-46 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 PRINTS PR01047 Threonyl-tRNA synthetase signature 494 522 1.2E-46 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 PRINTS PR01047 Threonyl-tRNA synthetase signature 564 576 1.2E-46 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 PRINTS PR01047 Threonyl-tRNA synthetase signature 537 550 1.2E-46 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 PRINTS PR01047 Threonyl-tRNA synthetase signature 389 412 1.2E-46 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 186 232 2.9E-13 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 PANTHER PTHR11451 32 667 1.0E-243 T 22-04-2016 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 65 664 31.97 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 350 559 1.4E-34 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 Pfam PF03129 Anticodon binding domain 571 660 3.1E-18 T 22-04-2016 IPR004154 Anticodon-binding RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 Gene3D G3DSA:3.40.50.800 561 665 7.4E-30 T 22-04-2016 IPR004154 Anticodon-binding RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 71 660 1.5E-188 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 SMART SM00863 177 232 1.5E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 SUPERFAMILY SSF55681 256 555 7.76E-87 T 22-04-2016 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 Gene3D G3DSA:3.30.980.10 65 127 5.3E-36 T 22-04-2016 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 Gene3D G3DSA:3.30.980.10 201 237 5.3E-36 T 22-04-2016 RM25_RS04650 7d482ed3b723ad529497046a711a8b4c 680 Gene3D G3DSA:3.30.54.20 129 200 8.1E-13 T 22-04-2016 RM25_RS02615 b9d61f146c1207208f28bba523d9a633 233 Gene3D G3DSA:3.40.1370.10 61 205 1.0E-52 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RM25_RS02615 b9d61f146c1207208f28bba523d9a633 233 SUPERFAMILY SSF52166 6 205 7.33E-75 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RM25_RS02615 b9d61f146c1207208f28bba523d9a633 233 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 12 211 33.548 T 22-04-2016 IPR013005 50S ribosomal protein uL4 RM25_RS02615 b9d61f146c1207208f28bba523d9a633 233 PANTHER PTHR10746 7 205 1.2E-77 T 22-04-2016 IPR013005 50S ribosomal protein uL4 RM25_RS02615 b9d61f146c1207208f28bba523d9a633 233 Pfam PF00573 Ribosomal protein L4/L1 family 20 205 5.0E-63 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 RM25_RS02615 b9d61f146c1207208f28bba523d9a633 233 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 20 206 8.0E-70 T 22-04-2016 IPR013005 50S ribosomal protein uL4 RM25_RS05595 c5ee9528a9f54616449606df3a698e77 255 Gene3D G3DSA:1.20.120.220 82 251 1.2E-37 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RM25_RS05595 c5ee9528a9f54616449606df3a698e77 255 SUPERFAMILY SSF81336 81 248 1.96E-33 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RM25_RS05595 c5ee9528a9f54616449606df3a698e77 255 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 26 249 1.2E-43 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RM25_RS05595 c5ee9528a9f54616449606df3a698e77 255 ProSitePatterns PS00449 ATP synthase a subunit signature. 175 184 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site RM25_RS05595 c5ee9528a9f54616449606df3a698e77 255 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 254 13.132 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RM25_RS05595 c5ee9528a9f54616449606df3a698e77 255 PANTHER PTHR11410 27 251 1.6E-52 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RM25_RS05595 c5ee9528a9f54616449606df3a698e77 255 PRINTS PR00123 ATP synthase A subunit signature 88 104 1.6E-18 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RM25_RS05595 c5ee9528a9f54616449606df3a698e77 255 PRINTS PR00123 ATP synthase A subunit signature 172 194 1.6E-18 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RM25_RS05595 c5ee9528a9f54616449606df3a698e77 255 PRINTS PR00123 ATP synthase A subunit signature 234 249 1.6E-18 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RM25_RS05595 c5ee9528a9f54616449606df3a698e77 255 Pfam PF00119 ATP synthase A chain 34 247 1.4E-47 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 ProSitePatterns PS00217 Sugar transport proteins signature 2. 132 157 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 PRINTS PR00171 Sugar transporter signature 377 398 6.3E-24 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 PRINTS PR00171 Sugar transporter signature 400 412 6.3E-24 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 PRINTS PR00171 Sugar transporter signature 44 54 6.3E-24 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 PRINTS PR00171 Sugar transporter signature 287 297 6.3E-24 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 PRINTS PR00171 Sugar transporter signature 127 146 6.3E-24 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 PANTHER PTHR23500:SF141 31 479 3.2E-188 T 22-04-2016 RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 SUPERFAMILY SSF103473 22 475 9.42E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 PANTHER PTHR23500 31 479 3.2E-188 T 22-04-2016 RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 Gene3D G3DSA:1.20.1250.20 275 477 1.3E-24 T 22-04-2016 RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 Gene3D G3DSA:1.20.1250.20 39 220 1.3E-24 T 22-04-2016 RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 Pfam PF00083 Sugar (and other) transporter 37 474 1.9E-106 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RM25_RS01175 badafaf40b0b88cc521039f29cbe3ba6 487 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 14 471 4.6E-106 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS06035 43e2cf95f39c815e89e1d1f828a4d26c 597 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS06035 43e2cf95f39c815e89e1d1f828a4d26c 597 Gene3D G3DSA:1.20.1560.10 6 323 5.0E-54 T 22-04-2016 RM25_RS06035 43e2cf95f39c815e89e1d1f828a4d26c 597 SUPERFAMILY SSF90123 6 323 2.35E-54 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS06035 43e2cf95f39c815e89e1d1f828a4d26c 597 Pfam PF00005 ABC transporter 361 509 8.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS06035 43e2cf95f39c815e89e1d1f828a4d26c 597 SUPERFAMILY SSF52540 342 579 1.7E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06035 43e2cf95f39c815e89e1d1f828a4d26c 597 PANTHER PTHR24221 1 588 1.5E-175 T 22-04-2016 RM25_RS06035 43e2cf95f39c815e89e1d1f828a4d26c 597 SMART SM00382 369 555 4.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS06035 43e2cf95f39c815e89e1d1f828a4d26c 597 Gene3D G3DSA:3.40.50.300 342 573 5.3E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06035 43e2cf95f39c815e89e1d1f828a4d26c 597 Pfam PF00664 ABC transporter transmembrane region 21 286 5.9E-36 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS06120 288f87936019b7b5e37db09e0b14dece 280 Gene3D G3DSA:3.40.50.1000 177 273 1.4E-33 T 22-04-2016 IPR023214 HAD-like domain RM25_RS06120 288f87936019b7b5e37db09e0b14dece 280 Gene3D G3DSA:3.40.50.1000 8 80 1.4E-33 T 22-04-2016 IPR023214 HAD-like domain RM25_RS06120 288f87936019b7b5e37db09e0b14dece 280 PANTHER PTHR10000:SF8 9 274 3.9E-40 T 22-04-2016 RM25_RS06120 288f87936019b7b5e37db09e0b14dece 280 SUPERFAMILY SSF56784 8 272 3.59E-43 T 22-04-2016 IPR023214 HAD-like domain RM25_RS06120 288f87936019b7b5e37db09e0b14dece 280 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 263 1.8E-32 T 22-04-2016 IPR023214 HAD-like domain RM25_RS06120 288f87936019b7b5e37db09e0b14dece 280 PANTHER PTHR10000 9 274 3.9E-40 T 22-04-2016 RM25_RS02425 96411c824dfea1388dee013fb7690041 359 SUPERFAMILY SSF52518 32 356 2.72E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS02425 96411c824dfea1388dee013fb7690041 359 PANTHER PTHR18968 34 330 5.5E-106 T 22-04-2016 RM25_RS02425 96411c824dfea1388dee013fb7690041 359 PANTHER PTHR18968:SF89 34 330 5.5E-106 T 22-04-2016 RM25_RS02425 96411c824dfea1388dee013fb7690041 359 Gene3D G3DSA:3.40.50.970 28 227 2.9E-82 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS02425 96411c824dfea1388dee013fb7690041 359 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 70 217 1.9E-28 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RM25_RS07875 f0c471cdb4bf6a0e55e1f4b75074236f 991 SUPERFAMILY SSF52540 75 128 1.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07875 f0c471cdb4bf6a0e55e1f4b75074236f 991 SUPERFAMILY SSF52540 162 256 1.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07875 f0c471cdb4bf6a0e55e1f4b75074236f 991 SUPERFAMILY SSF52540 8 28 1.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07875 f0c471cdb4bf6a0e55e1f4b75074236f 991 SUPERFAMILY SSF52540 496 590 3.76E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07875 f0c471cdb4bf6a0e55e1f4b75074236f 991 SUPERFAMILY SSF52540 82 131 3.76E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07875 f0c471cdb4bf6a0e55e1f4b75074236f 991 Gene3D G3DSA:3.40.50.300 82 124 5.9E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07875 f0c471cdb4bf6a0e55e1f4b75074236f 991 Pfam PF04851 Type III restriction enzyme, res subunit 7 257 1.6E-17 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RM25_RS07080 80d252133c3eb00ded6bd663b5a3a546 240 SMART SM00382 34 229 1.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS07080 80d252133c3eb00ded6bd663b5a3a546 240 Pfam PF00005 ABC transporter 26 173 1.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS07080 80d252133c3eb00ded6bd663b5a3a546 240 SUPERFAMILY SSF52540 10 229 1.31E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07080 80d252133c3eb00ded6bd663b5a3a546 240 Gene3D G3DSA:3.40.50.300 9 231 1.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07080 80d252133c3eb00ded6bd663b5a3a546 240 PANTHER PTHR24220 11 230 3.5E-87 T 22-04-2016 RM25_RS07080 80d252133c3eb00ded6bd663b5a3a546 240 PANTHER PTHR24220:SF578 11 230 3.5E-87 T 22-04-2016 RM25_RS07080 80d252133c3eb00ded6bd663b5a3a546 240 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS05200 a6422891446be07811f39f5dfef53fc6 276 PANTHER PTHR42301 8 274 1.3E-102 T 22-04-2016 RM25_RS05200 a6422891446be07811f39f5dfef53fc6 276 PIRSF PIRSF028754 2 276 3.4E-85 T 22-04-2016 IPR008492 Protein of unknown function DUF774 RM25_RS05200 a6422891446be07811f39f5dfef53fc6 276 SUPERFAMILY SSF159659 6 255 6.67E-76 T 22-04-2016 RM25_RS05200 a6422891446be07811f39f5dfef53fc6 276 PANTHER PTHR42301:SF2 8 274 1.3E-102 T 22-04-2016 RM25_RS05200 a6422891446be07811f39f5dfef53fc6 276 Pfam PF09754 PAC2 family 17 231 1.4E-42 T 22-04-2016 IPR019151 Proteasome assembly chaperone 2 RM25_RS03665 f68bf27fab3a7f69dd8606b952a97335 437 Gene3D G3DSA:3.40.1190.10 70 308 1.1E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS03665 f68bf27fab3a7f69dd8606b952a97335 437 SUPERFAMILY SSF53623 68 307 6.28E-30 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS03665 f68bf27fab3a7f69dd8606b952a97335 437 Pfam PF08353 Domain of unknown function (DUF1727) 329 426 3.1E-25 T 22-04-2016 IPR013564 Domain of unknown function DUF1727 RM25_RS03665 f68bf27fab3a7f69dd8606b952a97335 437 PANTHER PTHR23135:SF7 55 434 1.2E-83 T 22-04-2016 RM25_RS03665 f68bf27fab3a7f69dd8606b952a97335 437 PANTHER PTHR23135 55 434 1.2E-83 T 22-04-2016 RM25_RS03665 f68bf27fab3a7f69dd8606b952a97335 437 Pfam PF08245 Mur ligase middle domain 81 291 4.0E-13 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS02145 3bcc3aa6253cca72548034f5d79f0803 449 Pfam PF05167 Uncharacterised ACR (DUF711) 13 413 3.3E-172 T 22-04-2016 IPR007841 Uncharacterised protein family UPF0210 RM25_RS02145 3bcc3aa6253cca72548034f5d79f0803 449 PANTHER PTHR37560:SF2 1 449 4.6E-205 T 22-04-2016 RM25_RS02145 3bcc3aa6253cca72548034f5d79f0803 449 SUPERFAMILY SSF51998 4 444 1.92E-171 T 22-04-2016 RM25_RS02145 3bcc3aa6253cca72548034f5d79f0803 449 Gene3D G3DSA:3.20.70.20 4 448 6.6E-204 T 22-04-2016 RM25_RS02145 3bcc3aa6253cca72548034f5d79f0803 449 PANTHER PTHR37560 1 449 4.6E-205 T 22-04-2016 RM25_RS02145 3bcc3aa6253cca72548034f5d79f0803 449 Hamap MF_01221 UPF0210 protein . 2 449 50.131 T 22-04-2016 IPR007841 Uncharacterised protein family UPF0210 RM25_RS02805 3de3433ff77cb16599b5f8ee0530bd71 347 Pfam PF06737 Transglycosylase-like domain 274 347 2.2E-32 T 22-04-2016 IPR010618 Transglycosylase-like RM25_RS02805 3de3433ff77cb16599b5f8ee0530bd71 347 SUPERFAMILY SSF53955 272 346 2.95E-29 T 22-04-2016 IPR023346 Lysozyme-like domain RM25_RS02805 3de3433ff77cb16599b5f8ee0530bd71 347 Gene3D G3DSA:1.10.530.10 249 346 1.4E-36 T 22-04-2016 RM25_RS02805 3de3433ff77cb16599b5f8ee0530bd71 347 Pfam PF07501 G5 domain 188 260 2.3E-21 T 22-04-2016 IPR011098 G5 domain RM25_RS02805 3de3433ff77cb16599b5f8ee0530bd71 347 Pfam PF03990 Domain of unknown function (DUF348) 18 57 2.0E-12 T 22-04-2016 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RM25_RS02805 3de3433ff77cb16599b5f8ee0530bd71 347 Pfam PF03990 Domain of unknown function (DUF348) 75 111 4.7E-7 T 22-04-2016 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RM25_RS02805 3de3433ff77cb16599b5f8ee0530bd71 347 Pfam PF03990 Domain of unknown function (DUF348) 131 170 6.4E-9 T 22-04-2016 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RM25_RS02805 3de3433ff77cb16599b5f8ee0530bd71 347 SMART SM01208 184 262 4.1E-23 T 22-04-2016 IPR011098 G5 domain RM25_RS06335 8f5afb2e3e0e8b12b47c6ae8e36bedc6 916 Gene3D G3DSA:3.40.50.300 10 193 2.0E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06335 8f5afb2e3e0e8b12b47c6ae8e36bedc6 916 Gene3D G3DSA:3.40.50.300 351 437 1.2E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06335 8f5afb2e3e0e8b12b47c6ae8e36bedc6 916 Gene3D G3DSA:3.40.50.300 274 309 1.2E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06335 8f5afb2e3e0e8b12b47c6ae8e36bedc6 916 SMART SM01142 738 911 1.3E-44 T 22-04-2016 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal RM25_RS06335 8f5afb2e3e0e8b12b47c6ae8e36bedc6 916 SMART SM00490 342 428 9.1E-13 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS06335 8f5afb2e3e0e8b12b47c6ae8e36bedc6 916 SUPERFAMILY SSF52540 348 441 2.93E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06335 8f5afb2e3e0e8b12b47c6ae8e36bedc6 916 SUPERFAMILY SSF52540 263 306 2.93E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06335 8f5afb2e3e0e8b12b47c6ae8e36bedc6 916 SUPERFAMILY SSF52540 23 163 2.93E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06335 8f5afb2e3e0e8b12b47c6ae8e36bedc6 916 Pfam PF08148 DSHCT (NUC185) domain 741 910 2.1E-35 T 22-04-2016 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal RM25_RS06335 8f5afb2e3e0e8b12b47c6ae8e36bedc6 916 SMART SM00487 8 193 1.9E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS06335 8f5afb2e3e0e8b12b47c6ae8e36bedc6 916 Pfam PF00270 DEAD/DEAH box helicase 15 162 5.9E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RM25_RS11530 092fbf2bf93c98971a2434c3941f9f0c 387 PANTHER PTHR30535 86 368 2.7E-44 T 22-04-2016 RM25_RS11530 092fbf2bf93c98971a2434c3941f9f0c 387 Gene3D G3DSA:3.40.50.1980 254 382 2.8E-25 T 22-04-2016 RM25_RS11530 092fbf2bf93c98971a2434c3941f9f0c 387 Pfam PF01497 Periplasmic binding protein 118 362 5.3E-27 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RM25_RS11530 092fbf2bf93c98971a2434c3941f9f0c 387 SUPERFAMILY SSF53807 103 367 2.94E-42 T 22-04-2016 RM25_RS11530 092fbf2bf93c98971a2434c3941f9f0c 387 Gene3D G3DSA:3.40.50.1980 104 238 1.8E-11 T 22-04-2016 RM25_RS11530 092fbf2bf93c98971a2434c3941f9f0c 387 PANTHER PTHR30535:SF7 86 368 2.7E-44 T 22-04-2016 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 422 1.7E-164 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 Gene3D G3DSA:1.10.580.10 52 279 3.6E-88 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 2.5E-132 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 PANTHER PTHR11739 30 428 3.1E-180 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 PRINTS PR00143 Citrate synthase signature 240 268 2.1E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 PRINTS PR00143 Citrate synthase signature 218 233 2.1E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 PRINTS PR00143 Citrate synthase signature 164 177 2.1E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 PRINTS PR00143 Citrate synthase signature 296 316 2.1E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 PRINTS PR00143 Citrate synthase signature 379 393 2.1E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 PRINTS PR00143 Citrate synthase signature 359 375 2.1E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 PIRSF PIRSF001369 37 428 3.7E-147 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 SUPERFAMILY SSF48256 4 428 4.45E-149 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS11475 cdfc124b7591f140de3e46511f05bcb8 428 Gene3D G3DSA:1.10.230.10 280 373 4.8E-36 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 Pfam PF01593 Flavin containing amine oxidoreductase 6 438 3.9E-62 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 SUPERFAMILY SSF51905 1 299 2.16E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 SUPERFAMILY SSF51905 402 441 2.16E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 Gene3D G3DSA:3.50.50.60 1 32 3.1E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 Gene3D G3DSA:3.50.50.60 205 230 3.1E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 Gene3D G3DSA:3.50.50.60 394 442 3.1E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 PANTHER PTHR10742 1 442 5.1E-69 T 22-04-2016 RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 PRINTS PR00757 Flavin-containing amine oxidase signature 389 411 2.6E-9 T 22-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 PRINTS PR00757 Flavin-containing amine oxidase signature 368 387 2.6E-9 T 22-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 PRINTS PR00757 Flavin-containing amine oxidase signature 285 304 2.6E-9 T 22-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 PRINTS PR00757 Flavin-containing amine oxidase signature 420 437 2.6E-9 T 22-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 Gene3D G3DSA:3.90.660.10 231 388 1.9E-46 T 22-04-2016 RM25_RS09615 6f4568c2ea27fc1042f571461940fb76 445 SUPERFAMILY SSF54373 282 387 1.05E-27 T 22-04-2016 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 PANTHER PTHR23115 9 603 1.7E-277 T 22-04-2016 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 Gene3D G3DSA:3.30.70.870 299 377 2.6E-27 T 22-04-2016 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 TIGRFAM TIGR01393 lepA: elongation factor 4 13 602 1.3E-293 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 Pfam PF06421 GTP-binding protein LepA C-terminus 495 600 2.6E-48 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 PANTHER PTHR23115:SF97 9 603 1.7E-277 T 22-04-2016 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 Pfam PF00009 Elongation factor Tu GTP binding domain 13 189 4.3E-52 T 22-04-2016 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 SUPERFAMILY SSF54980 406 501 1.73E-23 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 SUPERFAMILY SSF52540 12 213 4.9E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 Hamap MF_00071 Elongation factor 4 [lepA]. 1 605 286.515 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 Gene3D G3DSA:3.30.70.240 408 497 1.8E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 SUPERFAMILY SSF54980 299 378 3.31E-20 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 184 2.8E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 PRINTS PR00315 GTP-binding elongation factor signature 134 143 6.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 PRINTS PR00315 GTP-binding elongation factor signature 98 109 6.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 PRINTS PR00315 GTP-binding elongation factor signature 82 92 6.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 Gene3D G3DSA:2.40.30.10 201 296 1.3E-21 T 22-04-2016 RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 Gene3D G3DSA:3.40.50.300 11 200 8.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 Pfam PF00679 Elongation factor G C-terminus 406 484 4.9E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 SUPERFAMILY SSF50447 191 294 2.17E-19 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RM25_RS04075 a3fa3f471be224a939d2d2d4ffe9b23a 609 SMART SM00838 405 493 0.0011 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RM25_RS07335 05c699f98423b6815f30d36727c68817 707 SUPERFAMILY SSF56112 8 239 3.51E-57 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS07335 05c699f98423b6815f30d36727c68817 707 Pfam PF00069 Protein kinase domain 13 222 3.9E-39 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RM25_RS07335 05c699f98423b6815f30d36727c68817 707 SMART SM00740 440 506 0.47 T 22-04-2016 IPR005543 PASTA domain RM25_RS07335 05c699f98423b6815f30d36727c68817 707 SMART SM00740 641 707 3.7E-7 T 22-04-2016 IPR005543 PASTA domain RM25_RS07335 05c699f98423b6815f30d36727c68817 707 SMART SM00740 507 574 1.6E-6 T 22-04-2016 IPR005543 PASTA domain RM25_RS07335 05c699f98423b6815f30d36727c68817 707 SMART SM00740 575 640 7.3E-13 T 22-04-2016 IPR005543 PASTA domain RM25_RS07335 05c699f98423b6815f30d36727c68817 707 PANTHER PTHR24362 7 317 9.5E-73 T 22-04-2016 RM25_RS07335 05c699f98423b6815f30d36727c68817 707 PANTHER PTHR24362:SF160 7 317 9.5E-73 T 22-04-2016 RM25_RS07335 05c699f98423b6815f30d36727c68817 707 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 89 101 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RM25_RS07335 05c699f98423b6815f30d36727c68817 707 Gene3D G3DSA:1.10.510.10 79 222 7.7E-36 T 22-04-2016 RM25_RS07335 05c699f98423b6815f30d36727c68817 707 Gene3D G3DSA:3.30.200.20 10 78 1.1E-14 T 22-04-2016 RM25_RS07335 05c699f98423b6815f30d36727c68817 707 Pfam PF03793 PASTA domain 513 573 3.8E-10 T 22-04-2016 IPR005543 PASTA domain RM25_RS07335 05c699f98423b6815f30d36727c68817 707 Pfam PF03793 PASTA domain 579 639 6.0E-14 T 22-04-2016 IPR005543 PASTA domain RM25_RS07335 05c699f98423b6815f30d36727c68817 707 Pfam PF03793 PASTA domain 447 499 2.0E-6 T 22-04-2016 IPR005543 PASTA domain RM25_RS07335 05c699f98423b6815f30d36727c68817 707 Pfam PF03793 PASTA domain 646 705 7.9E-8 T 22-04-2016 IPR005543 PASTA domain RM25_RS07335 05c699f98423b6815f30d36727c68817 707 SMART SM00220 3 238 1.1E-23 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RM25_RS02280 0242797815c1820a6b4335a6dc07eac8 154 PANTHER PTHR11086 13 145 5.7E-30 T 22-04-2016 IPR015517 Deoxycytidylate deaminase-related RM25_RS02280 0242797815c1820a6b4335a6dc07eac8 154 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 14 138 1.5E-22 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RM25_RS02280 0242797815c1820a6b4335a6dc07eac8 154 SUPERFAMILY SSF53927 16 140 5.33E-27 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RM25_RS02280 0242797815c1820a6b4335a6dc07eac8 154 Gene3D G3DSA:3.40.140.10 14 139 9.8E-30 T 22-04-2016 RM25_RS02280 0242797815c1820a6b4335a6dc07eac8 154 PIRSF PIRSF006019 6 151 6.4E-39 T 22-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 RM25_RS02280 0242797815c1820a6b4335a6dc07eac8 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 97 129 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RM25_RS04135 cc18571da669560bc8e2e1d2391fdc27 476 PANTHER PTHR23508:SF16 22 473 8.4E-179 T 22-04-2016 RM25_RS04135 cc18571da669560bc8e2e1d2391fdc27 476 PANTHER PTHR23508 22 473 8.4E-179 T 22-04-2016 RM25_RS04135 cc18571da669560bc8e2e1d2391fdc27 476 SUPERFAMILY SSF103473 6 458 3.92E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS04135 cc18571da669560bc8e2e1d2391fdc27 476 Pfam PF00083 Sugar (and other) transporter 26 241 1.6E-25 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RM25_RS04135 cc18571da669560bc8e2e1d2391fdc27 476 Pfam PF00083 Sugar (and other) transporter 253 460 3.6E-12 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RM25_RS04135 cc18571da669560bc8e2e1d2391fdc27 476 Gene3D G3DSA:1.20.1250.20 33 237 2.5E-17 T 22-04-2016 RM25_RS04135 cc18571da669560bc8e2e1d2391fdc27 476 Gene3D G3DSA:1.20.1250.20 262 452 1.4E-16 T 22-04-2016 RM25_RS00150 3d54b697f846c1ecef5dbaa965c1e3d7 398 PANTHER PTHR30349 311 391 2.9E-24 T 22-04-2016 RM25_RS00150 3d54b697f846c1ecef5dbaa965c1e3d7 398 PANTHER PTHR30349 79 293 2.9E-24 T 22-04-2016 RM25_RS00150 3d54b697f846c1ecef5dbaa965c1e3d7 398 PANTHER PTHR30349:SF20 311 391 2.9E-24 T 22-04-2016 RM25_RS00150 3d54b697f846c1ecef5dbaa965c1e3d7 398 PANTHER PTHR30349:SF20 79 293 2.9E-24 T 22-04-2016 RM25_RS00150 3d54b697f846c1ecef5dbaa965c1e3d7 398 SUPERFAMILY SSF56349 73 383 9.12E-46 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RM25_RS00150 3d54b697f846c1ecef5dbaa965c1e3d7 398 Gene3D G3DSA:1.10.443.10 179 389 1.6E-30 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS00150 3d54b697f846c1ecef5dbaa965c1e3d7 398 Pfam PF00589 Phage integrase family 182 375 1.6E-18 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS00150 3d54b697f846c1ecef5dbaa965c1e3d7 398 Gene3D G3DSA:1.10.150.130 73 166 4.9E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RM25_RS02950 ef08de1aaa571ae321bab61d9e685170 161 Gene3D G3DSA:3.90.79.10 5 140 1.7E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS02950 ef08de1aaa571ae321bab61d9e685170 161 PANTHER PTHR22769 1 154 1.1E-44 T 22-04-2016 RM25_RS02950 ef08de1aaa571ae321bab61d9e685170 161 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RM25_RS02950 ef08de1aaa571ae321bab61d9e685170 161 PANTHER PTHR22769:SF39 1 154 1.1E-44 T 22-04-2016 RM25_RS02950 ef08de1aaa571ae321bab61d9e685170 161 SUPERFAMILY SSF55811 3 136 9.21E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS02950 ef08de1aaa571ae321bab61d9e685170 161 Pfam PF00293 NUDIX domain 8 133 3.0E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RM25_RS08555 f3cd1b71d8cb2186f78fa763a543b55b 225 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 4 58 8.2E-15 T 22-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 RM25_RS08555 f3cd1b71d8cb2186f78fa763a543b55b 225 PANTHER PTHR33238 2 222 1.6E-51 T 22-04-2016 RM25_RS08555 f3cd1b71d8cb2186f78fa763a543b55b 225 Gene3D G3DSA:2.30.30.90 139 223 3.4E-10 T 22-04-2016 RM25_RS08555 f3cd1b71d8cb2186f78fa763a543b55b 225 SUPERFAMILY SSF50037 131 223 3.98E-10 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal RM25_RS08555 f3cd1b71d8cb2186f78fa763a543b55b 225 PANTHER PTHR33238:SF1 2 222 1.6E-51 T 22-04-2016 RM25_RS08555 f3cd1b71d8cb2186f78fa763a543b55b 225 SUPERFAMILY SSF47979 66 136 1.7E-21 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RM25_RS08555 f3cd1b71d8cb2186f78fa763a543b55b 225 Gene3D G3DSA:1.10.60.10 75 136 1.6E-25 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RM25_RS08555 f3cd1b71d8cb2186f78fa763a543b55b 225 Gene3D G3DSA:1.10.10.10 2 69 2.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08555 f3cd1b71d8cb2186f78fa763a543b55b 225 SMART SM00529 26 125 3.7E-31 T 22-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 RM25_RS08555 f3cd1b71d8cb2186f78fa763a543b55b 225 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 67 133 8.5E-24 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RM25_RS08555 f3cd1b71d8cb2186f78fa763a543b55b 225 SUPERFAMILY SSF46785 2 62 1.87E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08485 cc2085d5a5c85f03f163d4546727a368 212 Gene3D G3DSA:3.40.630.30 10 202 1.6E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS08485 cc2085d5a5c85f03f163d4546727a368 212 PANTHER PTHR13256:SF24 1 205 5.7E-30 T 22-04-2016 RM25_RS08485 cc2085d5a5c85f03f163d4546727a368 212 PANTHER PTHR13256 1 205 5.7E-30 T 22-04-2016 RM25_RS08485 cc2085d5a5c85f03f163d4546727a368 212 Pfam PF13302 Acetyltransferase (GNAT) domain 21 177 2.4E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS08485 cc2085d5a5c85f03f163d4546727a368 212 SUPERFAMILY SSF55729 15 201 2.76E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS11010 f74b2d03afd71d3dd0a3a02a06625893 282 SUPERFAMILY SSF52540 1 238 4.78E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11010 f74b2d03afd71d3dd0a3a02a06625893 282 SMART SM00382 26 221 6.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS11010 f74b2d03afd71d3dd0a3a02a06625893 282 Gene3D G3DSA:3.40.50.300 1 235 1.6E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11010 f74b2d03afd71d3dd0a3a02a06625893 282 PANTHER PTHR24220:SF350 2 237 1.4E-112 T 22-04-2016 RM25_RS11010 f74b2d03afd71d3dd0a3a02a06625893 282 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS11010 f74b2d03afd71d3dd0a3a02a06625893 282 Pfam PF00005 ABC transporter 18 162 5.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS11010 f74b2d03afd71d3dd0a3a02a06625893 282 PANTHER PTHR24220 2 237 1.4E-112 T 22-04-2016 RM25_RS08860 d80aa9077e1c0a20d78d0ec32c2b8751 243 Pfam PF16859 Bacterial transcriptional repressor C-terminal 87 197 8.3E-22 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RM25_RS08860 d80aa9077e1c0a20d78d0ec32c2b8751 243 SUPERFAMILY SSF48498 88 204 2.98E-14 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RM25_RS08860 d80aa9077e1c0a20d78d0ec32c2b8751 243 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 75 4.3E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS08860 d80aa9077e1c0a20d78d0ec32c2b8751 243 PANTHER PTHR30055 13 202 9.7E-26 T 22-04-2016 RM25_RS08860 d80aa9077e1c0a20d78d0ec32c2b8751 243 Gene3D G3DSA:1.10.10.60 15 71 8.5E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS08860 d80aa9077e1c0a20d78d0ec32c2b8751 243 Gene3D G3DSA:1.10.357.10 72 202 5.7E-19 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS08860 d80aa9077e1c0a20d78d0ec32c2b8751 243 PANTHER PTHR30055:SF66 13 202 9.7E-26 T 22-04-2016 RM25_RS08860 d80aa9077e1c0a20d78d0ec32c2b8751 243 SUPERFAMILY SSF46689 18 79 2.24E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS01770 6dc6cec4e6bd6b2d24fcd192c3623479 424 Pfam PF13840 ACT domain 344 403 1.2E-11 T 22-04-2016 IPR027795 GATS-like ACT domain RM25_RS01770 6dc6cec4e6bd6b2d24fcd192c3623479 424 SUPERFAMILY SSF55021 253 333 1.03E-17 T 22-04-2016 RM25_RS01770 6dc6cec4e6bd6b2d24fcd192c3623479 424 SUPERFAMILY SSF55021 335 412 1.15E-21 T 22-04-2016 RM25_RS01770 6dc6cec4e6bd6b2d24fcd192c3623479 424 Pfam PF01842 ACT domain 272 334 6.9E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RM25_RS01770 6dc6cec4e6bd6b2d24fcd192c3623479 424 Gene3D G3DSA:3.40.1160.10 1 245 2.8E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RM25_RS01770 6dc6cec4e6bd6b2d24fcd192c3623479 424 SUPERFAMILY SSF53633 3 243 3.8E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RM25_RS01770 6dc6cec4e6bd6b2d24fcd192c3623479 424 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 409 3.0E-112 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RM25_RS01770 6dc6cec4e6bd6b2d24fcd192c3623479 424 PIRSF PIRSF000726 59 417 6.5E-120 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RM25_RS01770 6dc6cec4e6bd6b2d24fcd192c3623479 424 PANTHER PTHR21499 1 420 1.3E-160 T 22-04-2016 RM25_RS01770 6dc6cec4e6bd6b2d24fcd192c3623479 424 Pfam PF00696 Amino acid kinase family 3 231 1.7E-57 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RM25_RS01770 6dc6cec4e6bd6b2d24fcd192c3623479 424 PANTHER PTHR21499:SF27 1 420 1.3E-160 T 22-04-2016 RM25_RS01770 6dc6cec4e6bd6b2d24fcd192c3623479 424 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RM25_RS01420 96a7e0895216a4bcc53c12b0c59312a2 333 Gene3D G3DSA:3.30.420.10 130 158 1.2E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01420 96a7e0895216a4bcc53c12b0c59312a2 333 Gene3D G3DSA:3.30.420.10 190 321 1.2E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01420 96a7e0895216a4bcc53c12b0c59312a2 333 SUPERFAMILY SSF46689 4 107 3.23E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS01420 96a7e0895216a4bcc53c12b0c59312a2 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 78 2.3E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS01420 96a7e0895216a4bcc53c12b0c59312a2 333 SUPERFAMILY SSF53098 137 148 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01420 96a7e0895216a4bcc53c12b0c59312a2 333 SUPERFAMILY SSF53098 187 328 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01420 96a7e0895216a4bcc53c12b0c59312a2 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS01420 96a7e0895216a4bcc53c12b0c59312a2 333 PANTHER PTHR24559 183 316 4.7E-16 T 22-04-2016 RM25_RS01420 96a7e0895216a4bcc53c12b0c59312a2 333 PANTHER PTHR24559 125 149 4.7E-16 T 22-04-2016 RM25_RS01420 96a7e0895216a4bcc53c12b0c59312a2 333 Pfam PF00665 Integrase core domain 136 284 1.8E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS11890 1de988f5c19cc02ca08d1ef8d52cd2db 60 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 60 16.53 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RM25_RS11890 1de988f5c19cc02ca08d1ef8d52cd2db 60 Pfam PF02416 mttA/Hcf106 family 3 50 3.7E-17 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RM25_RS11890 1de988f5c19cc02ca08d1ef8d52cd2db 60 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 45 7.0E-17 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 SUPERFAMILY SSF54368 5 103 1.31E-32 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 PANTHER PTHR20852 6 140 8.0E-241 T 22-04-2016 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 PANTHER PTHR20852 158 473 8.0E-241 T 22-04-2016 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 97 9.5E-28 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 SMART SM01230 104 383 3.0E-154 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 PANTHER PTHR20852:SF15 6 140 8.0E-241 T 22-04-2016 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 PANTHER PTHR20852:SF15 158 473 8.0E-241 T 22-04-2016 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 472 2.2E-199 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 Gene3D G3DSA:3.10.20.70 6 107 2.1E-37 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 Pfam PF00120 Glutamine synthetase, catalytic domain 105 470 8.2E-136 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 SUPERFAMILY SSF55931 105 472 4.41E-139 T 22-04-2016 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 390 402 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07470 6ee88e110d77386c01750030edb06306 473 Gene3D G3DSA:3.30.590.10 108 459 2.7E-135 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 RM25_RS06320 4548da3f682663dd39b0116a19f12258 254 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 253 45.123 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 RM25_RS06320 4548da3f682663dd39b0116a19f12258 254 PANTHER PTHR21235:SF2 2 254 7.6E-113 T 22-04-2016 RM25_RS06320 4548da3f682663dd39b0116a19f12258 254 PANTHER PTHR21235 2 254 7.6E-113 T 22-04-2016 RM25_RS06320 4548da3f682663dd39b0116a19f12258 254 SUPERFAMILY SSF51366 4 253 6.75E-77 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RM25_RS06320 4548da3f682663dd39b0116a19f12258 254 Gene3D G3DSA:3.20.20.70 6 254 5.4E-96 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS06320 4548da3f682663dd39b0116a19f12258 254 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 253 9.0E-103 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 RM25_RS06320 4548da3f682663dd39b0116a19f12258 254 Pfam PF00977 Histidine biosynthesis protein 6 237 5.6E-81 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 246 365 1.5E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 Pfam PF00672 HAMP domain 64 131 6.6E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 SUPERFAMILY SSF158472 85 133 3.01E-5 T 22-04-2016 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 Gene3D G3DSA:3.30.565.10 204 365 1.9E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 SMART SM00304 83 136 3.8E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 SUPERFAMILY SSF55874 190 365 1.57E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 SMART SM00388 137 200 1.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 SUPERFAMILY SSF47384 120 198 1.02E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 364 3.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 344 3.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 305 3.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 319 3.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 198 3.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 Gene3D G3DSA:1.10.287.130 127 193 8.2E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 PANTHER PTHR24423 77 365 3.5E-64 T 22-04-2016 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 PANTHER PTHR24423 1 11 3.5E-64 T 22-04-2016 RM25_RS00735 d94f84470248c3e2bc56790ea1579f98 367 SMART SM00387 245 367 1.7E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 SUPERFAMILY SSF51735 3 181 1.09E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 PANTHER PTHR11728:SF1 3 330 1.6E-43 T 22-04-2016 RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 PIRSF PIRSF000114 1 341 8.3E-46 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 Gene3D G3DSA:1.10.1040.10 188 330 4.1E-38 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 PANTHER PTHR11728 3 330 1.6E-43 T 22-04-2016 RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 SUPERFAMILY SSF48179 188 330 5.44E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 Gene3D G3DSA:3.40.50.720 4 180 2.5E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 188 330 8.0E-31 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 251 268 2.0E-14 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 181 205 2.0E-14 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 2.0E-14 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 141 161 2.0E-14 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RM25_RS10840 5b525ec4a6b031e94110eabae56def57 350 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 166 4.1E-17 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RM25_RS02000 1af1e3774e1ae07ce5bd03573fa34b31 585 SUPERFAMILY SSF52518 366 549 5.68E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS02000 1af1e3774e1ae07ce5bd03573fa34b31 585 TIGRFAM TIGR02720 pyruv_oxi_spxB: pyruvate oxidase 6 575 3.5E-209 T 22-04-2016 IPR014092 Pyruvate oxidase GO:0047112|GO:0055114 KEGG: 00620+1.2.3.3 RM25_RS02000 1af1e3774e1ae07ce5bd03573fa34b31 585 Gene3D G3DSA:3.40.50.1220 191 345 1.1E-34 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS02000 1af1e3774e1ae07ce5bd03573fa34b31 585 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 389 535 1.8E-33 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RM25_RS02000 1af1e3774e1ae07ce5bd03573fa34b31 585 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 324 3.0E-24 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RM25_RS02000 1af1e3774e1ae07ce5bd03573fa34b31 585 Gene3D G3DSA:3.40.50.970 2 175 1.4E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS02000 1af1e3774e1ae07ce5bd03573fa34b31 585 SUPERFAMILY SSF52467 189 360 4.67E-34 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS02000 1af1e3774e1ae07ce5bd03573fa34b31 585 PANTHER PTHR18968:SF124 3 540 8.3E-171 T 22-04-2016 RM25_RS02000 1af1e3774e1ae07ce5bd03573fa34b31 585 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 2.4E-45 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RM25_RS02000 1af1e3774e1ae07ce5bd03573fa34b31 585 SUPERFAMILY SSF52518 1 174 4.42E-47 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS02000 1af1e3774e1ae07ce5bd03573fa34b31 585 PANTHER PTHR18968 3 540 8.3E-171 T 22-04-2016 RM25_RS02000 1af1e3774e1ae07ce5bd03573fa34b31 585 Gene3D G3DSA:3.40.50.970 346 543 2.9E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS02755 a4c416de28cbf09b3551dc4e60dd1795 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 155 167 2.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RM25_RS02755 a4c416de28cbf09b3551dc4e60dd1795 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 83 99 2.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RM25_RS02755 a4c416de28cbf09b3551dc4e60dd1795 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 61 74 2.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RM25_RS02755 a4c416de28cbf09b3551dc4e60dd1795 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 186 198 2.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RM25_RS02755 a4c416de28cbf09b3551dc4e60dd1795 262 Pfam PF00557 Metallopeptidase family M24 1 233 2.2E-43 T 22-04-2016 IPR000994 Peptidase M24, structural domain RM25_RS02755 a4c416de28cbf09b3551dc4e60dd1795 262 PANTHER PTHR10804:SF41 1 243 3.0E-93 T 22-04-2016 RM25_RS02755 a4c416de28cbf09b3551dc4e60dd1795 262 Hamap MF_01974 Methionine aminopeptidase [map]. 1 244 33.093 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RM25_RS02755 a4c416de28cbf09b3551dc4e60dd1795 262 SUPERFAMILY SSF55920 1 242 3.79E-70 T 22-04-2016 IPR000994 Peptidase M24, structural domain RM25_RS02755 a4c416de28cbf09b3551dc4e60dd1795 262 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 161 179 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RM25_RS02755 a4c416de28cbf09b3551dc4e60dd1795 262 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 243 2.3E-76 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RM25_RS02755 a4c416de28cbf09b3551dc4e60dd1795 262 Gene3D G3DSA:3.90.230.10 1 244 2.3E-73 T 22-04-2016 IPR000994 Peptidase M24, structural domain RM25_RS02755 a4c416de28cbf09b3551dc4e60dd1795 262 PANTHER PTHR10804 1 243 3.0E-93 T 22-04-2016 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 Gene3D G3DSA:3.40.50.300 17 72 1.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 Gene3D G3DSA:3.40.50.300 129 324 1.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 Gene3D G3DSA:1.10.486.10 465 606 2.5E-29 T 22-04-2016 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 161 2.9E-21 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 Pfam PF00580 UvrD/REP helicase N-terminal domain 215 323 2.6E-24 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 PANTHER PTHR11070 680 990 2.0E-156 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 PANTHER PTHR11070 1 85 2.0E-156 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 SUPERFAMILY SSF52980 784 1113 1.07E-42 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 9 1114 10.645 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 Gene3D G3DSA:3.90.320.10 775 1117 1.8E-62 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 Pfam PF13361 UvrD-like helicase C-terminal domain 560 705 1.1E-14 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 SUPERFAMILY SSF52540 19 76 2.95E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 SUPERFAMILY SSF52540 681 707 2.95E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 SUPERFAMILY SSF52540 121 649 2.95E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 PANTHER PTHR11070 1006 1109 2.0E-156 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 PANTHER PTHR11070 121 649 2.0E-156 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 PANTHER PTHR11070:SF23 1006 1109 2.0E-156 T 22-04-2016 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 PANTHER PTHR11070:SF23 680 990 2.0E-156 T 22-04-2016 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 PANTHER PTHR11070:SF23 121 649 2.0E-156 T 22-04-2016 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 PANTHER PTHR11070:SF23 1 85 2.0E-156 T 22-04-2016 RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 Gene3D G3DSA:3.40.50.300 332 461 9.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05855 c450f955d9bb2998838e4c26e0ef8074 1122 Gene3D G3DSA:3.40.50.300 607 743 9.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06090 5f28182e09673dc6a206ee209f61ac8b 250 PIRSF PIRSF004848 1 249 4.0E-57 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RM25_RS06090 5f28182e09673dc6a206ee209f61ac8b 250 Gene3D G3DSA:3.20.20.10 7 247 1.3E-77 T 22-04-2016 IPR029066 PLP-binding barrel RM25_RS06090 5f28182e09673dc6a206ee209f61ac8b 250 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 22 244 3.4E-47 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RM25_RS06090 5f28182e09673dc6a206ee209f61ac8b 250 Pfam PF01168 Alanine racemase, N-terminal domain 34 244 9.1E-20 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS06090 5f28182e09673dc6a206ee209f61ac8b 250 PANTHER PTHR10146 1 246 2.2E-77 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RM25_RS06090 5f28182e09673dc6a206ee209f61ac8b 250 SUPERFAMILY SSF51419 9 242 2.75E-61 T 22-04-2016 IPR029066 PLP-binding barrel RM25_RS02520 be8a4b3521955d0a0d199d55e2fd5902 142 SMART SM00649 11 142 3.2E-79 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RM25_RS02520 be8a4b3521955d0a0d199d55e2fd5902 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 7 142 29.81 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RM25_RS02520 be8a4b3521955d0a0d199d55e2fd5902 142 SUPERFAMILY SSF46906 69 141 8.11E-29 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RM25_RS02520 be8a4b3521955d0a0d199d55e2fd5902 142 Gene3D G3DSA:1.10.10.250 74 142 5.1E-34 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RM25_RS02520 be8a4b3521955d0a0d199d55e2fd5902 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 38 75 4.0E-12 T 22-04-2016 RM25_RS02520 be8a4b3521955d0a0d199d55e2fd5902 142 PANTHER PTHR11661 1 141 6.6E-68 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RM25_RS02520 be8a4b3521955d0a0d199d55e2fd5902 142 SUPERFAMILY SSF54747 4 74 2.88E-26 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal RM25_RS02520 be8a4b3521955d0a0d199d55e2fd5902 142 Gene3D G3DSA:3.30.1550.10 4 73 9.2E-33 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal RM25_RS02520 be8a4b3521955d0a0d199d55e2fd5902 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 11 68 4.9E-25 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal RM25_RS02520 be8a4b3521955d0a0d199d55e2fd5902 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 73 141 2.4E-28 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RM25_RS02520 be8a4b3521955d0a0d199d55e2fd5902 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 5 142 2.3E-59 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 RM25_RS00045 70375962859aaf95eb2ed6c071b5ca5c 433 PANTHER PTHR32182:SF0 1 379 2.4E-58 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 RM25_RS00045 70375962859aaf95eb2ed6c071b5ca5c 433 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 393 1.0E-103 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 RM25_RS00045 70375962859aaf95eb2ed6c071b5ca5c 433 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 378 4.6E-19 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RM25_RS00045 70375962859aaf95eb2ed6c071b5ca5c 433 Gene3D G3DSA:3.40.50.300 279 377 4.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00045 70375962859aaf95eb2ed6c071b5ca5c 433 Gene3D G3DSA:3.40.50.300 1 174 4.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00045 70375962859aaf95eb2ed6c071b5ca5c 433 ProSitePatterns PS00618 RecF protein signature 2. 346 364 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 RM25_RS00045 70375962859aaf95eb2ed6c071b5ca5c 433 PANTHER PTHR32182 1 379 2.4E-58 T 22-04-2016 RM25_RS00045 70375962859aaf95eb2ed6c071b5ca5c 433 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 433 82.912 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 RM25_RS00045 70375962859aaf95eb2ed6c071b5ca5c 433 SUPERFAMILY SSF52540 1 217 4.32E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00045 70375962859aaf95eb2ed6c071b5ca5c 433 SUPERFAMILY SSF52540 274 371 4.32E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 PANTHER PTHR10196:SF69 1 508 2.9E-274 T 22-04-2016 RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 367 387 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 501 2.5E-225 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 PANTHER PTHR10196 1 508 2.9E-274 T 22-04-2016 RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 SUPERFAMILY SSF53067 259 502 9.23E-85 T 22-04-2016 RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 PIRSF PIRSF000538 4 506 6.4E-172 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 256 1.2E-79 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 Hamap MF_00186 Glycerol kinase [glpK]. 4 502 56.101 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 Gene3D G3DSA:3.30.420.40 2 257 7.9E-108 T 22-04-2016 RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 265 455 9.2E-68 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 SUPERFAMILY SSF53067 5 259 1.04E-94 T 22-04-2016 RM25_RS06805 c97f762e5749bf1b67a5114a41899fe4 508 Gene3D G3DSA:3.30.420.40 258 503 2.8E-103 T 22-04-2016 RM25_RS02275 cbaef862264e828406eeeff1901fa00d 307 PANTHER PTHR11562 16 305 4.7E-95 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RM25_RS02275 cbaef862264e828406eeeff1901fa00d 307 Gene3D G3DSA:1.20.1510.10 19 213 2.6E-46 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RM25_RS02275 cbaef862264e828406eeeff1901fa00d 307 PANTHER PTHR11562:SF55 16 305 4.7E-95 T 22-04-2016 RM25_RS02275 cbaef862264e828406eeeff1901fa00d 307 Pfam PF16916 Dimerisation domain of Zinc Transporter 217 295 3.6E-19 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RM25_RS02275 cbaef862264e828406eeeff1901fa00d 307 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 17 295 2.6E-73 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RM25_RS02275 cbaef862264e828406eeeff1901fa00d 307 SUPERFAMILY SSF160240 216 295 1.44E-18 T 22-04-2016 RM25_RS02275 cbaef862264e828406eeeff1901fa00d 307 Gene3D G3DSA:3.30.70.1350 215 297 7.2E-21 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RM25_RS02275 cbaef862264e828406eeeff1901fa00d 307 SUPERFAMILY SSF161111 17 214 2.88E-54 T 22-04-2016 RM25_RS02275 cbaef862264e828406eeeff1901fa00d 307 Pfam PF01545 Cation efflux family 20 213 3.8E-43 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RM25_RS06220 36941308882be63050cf3561bcd0ea05 361 PANTHER PTHR12213:SF0 4 171 4.4E-59 T 22-04-2016 RM25_RS06220 36941308882be63050cf3561bcd0ea05 361 PANTHER PTHR12213 4 171 4.4E-59 T 22-04-2016 RM25_RS06220 36941308882be63050cf3561bcd0ea05 361 Gene3D G3DSA:1.20.1200.10 13 171 9.9E-52 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RM25_RS06220 36941308882be63050cf3561bcd0ea05 361 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 10 124 1.0E-29 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RM25_RS06220 36941308882be63050cf3561bcd0ea05 361 SUPERFAMILY SSF89028 3 175 3.53E-53 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RM25_RS06220 36941308882be63050cf3561bcd0ea05 361 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 5 173 7.3E-48 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RM25_RS06220 36941308882be63050cf3561bcd0ea05 361 Pfam PF01923 Cobalamin adenosyltransferase 4 167 2.2E-52 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RM25_RS06220 36941308882be63050cf3561bcd0ea05 361 SUPERFAMILY SSF143744 227 353 1.7E-32 T 22-04-2016 RM25_RS06220 36941308882be63050cf3561bcd0ea05 361 Pfam PF03928 Haem-degrading 228 349 1.6E-26 T 22-04-2016 IPR005624 Haem-degrading RM25_RS04480 1726e57f42d7defe92df9dbc4bcf3bf4 820 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 40 472 8.6E-147 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04480 1726e57f42d7defe92df9dbc4bcf3bf4 820 Gene3D G3DSA:3.30.1360.40 243 340 1.4E-27 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RM25_RS04480 1726e57f42d7defe92df9dbc4bcf3bf4 820 Gene3D G3DSA:3.90.199.10 341 406 2.9E-109 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RM25_RS04480 1726e57f42d7defe92df9dbc4bcf3bf4 820 Gene3D G3DSA:3.90.199.10 39 242 2.9E-109 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RM25_RS04480 1726e57f42d7defe92df9dbc4bcf3bf4 820 PANTHER PTHR10169:SF48 10 759 7.0E-236 T 22-04-2016 RM25_RS04480 1726e57f42d7defe92df9dbc4bcf3bf4 820 SUPERFAMILY SSF56719 39 494 2.35E-162 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RM25_RS04480 1726e57f42d7defe92df9dbc4bcf3bf4 820 PANTHER PTHR10169 10 759 7.0E-236 T 22-04-2016 RM25_RS04480 1726e57f42d7defe92df9dbc4bcf3bf4 820 Gene3D G3DSA:2.120.10.90 511 775 3.4E-38 T 22-04-2016 RM25_RS04480 1726e57f42d7defe92df9dbc4bcf3bf4 820 SUPERFAMILY SSF101904 511 779 9.42E-36 T 22-04-2016 RM25_RS04480 1726e57f42d7defe92df9dbc4bcf3bf4 820 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 738 759 0.012 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RM25_RS04480 1726e57f42d7defe92df9dbc4bcf3bf4 820 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 669 712 1.6E-6 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RM25_RS04480 1726e57f42d7defe92df9dbc4bcf3bf4 820 SMART SM00434 19 472 1.1E-251 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 SUPERFAMILY SSF82771 18 101 6.54E-23 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 13 463 3.5E-130 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 Pfam PF14520 Helix-hairpin-helix domain 580 631 2.8E-11 T 22-04-2016 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 PANTHER PTHR30562:SF1 1 463 4.4E-251 T 22-04-2016 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 PANTHER PTHR30562:SF1 490 630 4.4E-251 T 22-04-2016 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 PANTHER PTHR30562 1 463 4.4E-251 T 22-04-2016 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 PANTHER PTHR30562 490 630 4.4E-251 T 22-04-2016 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 Gene3D G3DSA:4.10.860.10 187 245 1.3E-16 T 22-04-2016 IPR001943 UVR domain GO:0005515 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 SUPERFAMILY SSF46600 194 245 9.94E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 629 29.681 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 Gene3D G3DSA:1.10.150.20 578 631 4.6E-19 T 22-04-2016 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 Gene3D G3DSA:3.40.1440.10 17 98 1.2E-11 T 22-04-2016 IPR027299 GIY-YIG domain RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 SMART SM00278 578 597 400.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 SMART SM00278 610 629 0.71 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 Pfam PF02151 UvrB/uvrC motif 210 242 4.7E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 SUPERFAMILY SSF47781 537 634 1.3E-23 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 SMART SM00465 17 99 1.1E-21 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 Pfam PF01541 GIY-YIG catalytic domain 19 92 3.5E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily RM25_RS07100 e70401fd13d0a0f4661aaf7915290dbe 664 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 391 564 8.8E-49 T 22-04-2016 IPR001162 UvrC family homology region RM25_RS09385 d34162430fe6ea9ea53b0f451f731319 362 PANTHER PTHR30570:SF0 10 362 3.4E-73 T 22-04-2016 RM25_RS09385 d34162430fe6ea9ea53b0f451f731319 362 PANTHER PTHR30570 10 362 3.4E-73 T 22-04-2016 RM25_RS09385 d34162430fe6ea9ea53b0f451f731319 362 SUPERFAMILY SSF53850 44 362 1.84E-72 T 22-04-2016 RM25_RS09385 d34162430fe6ea9ea53b0f451f731319 362 PIRSF PIRSF002756 1 362 5.5E-102 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RM25_RS09385 d34162430fe6ea9ea53b0f451f731319 362 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 44 361 4.7E-66 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RM25_RS09385 d34162430fe6ea9ea53b0f451f731319 362 Gene3D G3DSA:3.40.190.10 54 126 2.8E-4 T 22-04-2016 RM25_RS09385 d34162430fe6ea9ea53b0f451f731319 362 Gene3D G3DSA:3.40.190.10 302 353 2.8E-4 T 22-04-2016 RM25_RS09385 d34162430fe6ea9ea53b0f451f731319 362 Gene3D G3DSA:3.40.190.10 128 300 1.3E-48 T 22-04-2016 RM25_RS09385 d34162430fe6ea9ea53b0f451f731319 362 Pfam PF12849 PBP superfamily domain 34 332 3.5E-51 T 22-04-2016 IPR024370 PBP domain RM25_RS10385 10beb845b63b45f50ea4ab1305f8527b 114 Gene3D G3DSA:1.10.1660.10 1 111 1.6E-26 T 22-04-2016 RM25_RS10385 10beb845b63b45f50ea4ab1305f8527b 114 PANTHER PTHR30204:SF4 1 112 9.7E-25 T 22-04-2016 RM25_RS10385 10beb845b63b45f50ea4ab1305f8527b 114 SUPERFAMILY SSF46955 1 107 5.86E-24 T 22-04-2016 IPR009061 Putative DNA-binding domain RM25_RS10385 10beb845b63b45f50ea4ab1305f8527b 114 Pfam PF13411 MerR HTH family regulatory protein 1 65 5.7E-15 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS10385 10beb845b63b45f50ea4ab1305f8527b 114 SMART SM00422 1 69 6.0E-15 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS10385 10beb845b63b45f50ea4ab1305f8527b 114 PANTHER PTHR30204 1 112 9.7E-25 T 22-04-2016 RM25_RS10385 10beb845b63b45f50ea4ab1305f8527b 114 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 7.4E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS10385 10beb845b63b45f50ea4ab1305f8527b 114 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.4E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS10385 10beb845b63b45f50ea4ab1305f8527b 114 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.4E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 SUPERFAMILY SSF53383 518 841 4.5E-57 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 9 480 1.5E-97 T 22-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 178 7.6E-16 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 697 710 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 Pfam PF00155 Aminotransferase class I and II 521 829 3.6E-27 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 Gene3D G3DSA:3.40.50.880 266 482 1.3E-19 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 7 470 37.858 T 22-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 267 468 2.1E-18 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 Gene3D G3DSA:3.90.1150.10 750 842 2.3E-12 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 Gene3D G3DSA:3.40.640.10 532 741 1.0E-47 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 PANTHER PTHR21343 4 251 4.1E-129 T 22-04-2016 RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 PANTHER PTHR21343 269 518 4.1E-129 T 22-04-2016 RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 SUPERFAMILY SSF52540 9 213 3.02E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 SUPERFAMILY SSF52317 266 479 3.23E-22 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 PANTHER PTHR21343:SF6 4 251 4.1E-129 T 22-04-2016 RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 PANTHER PTHR21343:SF6 269 518 4.1E-129 T 22-04-2016 RM25_RS04755 e0335142f896c11d1d597fedccd20b15 861 Gene3D G3DSA:3.40.50.300 8 211 9.1E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02985 bb726a1522c2ebf7d68d9063b783c875 98 SMART SM00883 4 96 3.6E-54 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS02985 bb726a1522c2ebf7d68d9063b783c875 98 ProSitePatterns PS00681 Chaperonins cpn10 signature. 5 29 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RM25_RS02985 bb726a1522c2ebf7d68d9063b783c875 98 Hamap MF_00580 10 kDa chaperonin [groS]. 4 97 25.174 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS02985 bb726a1522c2ebf7d68d9063b783c875 98 Gene3D G3DSA:2.30.33.40 4 96 1.5E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS02985 bb726a1522c2ebf7d68d9063b783c875 98 SUPERFAMILY SSF50129 3 96 8.01E-35 T 22-04-2016 IPR011032 GroES-like RM25_RS02985 bb726a1522c2ebf7d68d9063b783c875 98 PRINTS PR00297 10kDa chaperonin signature 5 20 5.2E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS02985 bb726a1522c2ebf7d68d9063b783c875 98 PRINTS PR00297 10kDa chaperonin signature 83 96 5.2E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS02985 bb726a1522c2ebf7d68d9063b783c875 98 PRINTS PR00297 10kDa chaperonin signature 27 48 5.2E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS02985 bb726a1522c2ebf7d68d9063b783c875 98 PRINTS PR00297 10kDa chaperonin signature 62 74 5.2E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS02985 bb726a1522c2ebf7d68d9063b783c875 98 Pfam PF00166 Chaperonin 10 Kd subunit 5 96 5.2E-36 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS02985 bb726a1522c2ebf7d68d9063b783c875 98 PANTHER PTHR10772 2 96 8.5E-46 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS08275 c36d7226d227ad930af2899792271be8 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 116 2.3E-10 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RM25_RS08275 c36d7226d227ad930af2899792271be8 122 SUPERFAMILY SSF54593 1 119 8.19E-24 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RM25_RS08275 c36d7226d227ad930af2899792271be8 122 Gene3D G3DSA:3.10.180.10 6 119 1.2E-19 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 TIGRFAM TIGR00115 tig: trigger factor 12 421 3.1E-116 T 22-04-2016 IPR005215 Trigger factor GO:0015031 RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 SUPERFAMILY SSF102735 3 130 3.66E-35 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 Gene3D G3DSA:3.30.70.1050 4 118 1.6E-34 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 Gene3D G3DSA:3.10.50.40 156 209 7.5E-6 T 22-04-2016 RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 Pfam PF05697 Bacterial trigger factor protein (TF) 4 143 3.9E-42 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 214 6.0E-6 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 PANTHER PTHR30560 4 440 1.5E-91 T 22-04-2016 RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 SUPERFAMILY SSF109998 245 438 9.55E-37 T 22-04-2016 IPR027304 Trigger factor/SurA domain RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 PANTHER PTHR30560:SF3 4 440 1.5E-91 T 22-04-2016 RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 Gene3D G3DSA:1.10.3120.10 210 394 3.4E-41 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 258 422 1.1E-26 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 Hamap MF_00303 Trigger factor [tig]. 1 428 18.973 T 22-04-2016 IPR005215 Trigger factor GO:0015031 RM25_RS03840 5a82001a5db8454748f284280af7d13f 527 SUPERFAMILY SSF54534 133 243 6.07E-20 T 22-04-2016 RM25_RS09105 2717fb162a95c6a8f3eb3bf8205c0623 511 SUPERFAMILY SSF53448 75 342 7.88E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS09105 2717fb162a95c6a8f3eb3bf8205c0623 511 Gene3D G3DSA:3.90.550.10 91 324 3.0E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS09105 2717fb162a95c6a8f3eb3bf8205c0623 511 Pfam PF13632 Glycosyl transferase family group 2 170 379 2.5E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RM25_RS09160 1ba84043b891b76ace8ed4371307d26b 88 Gene3D G3DSA:3.30.1340.10 1 86 1.6E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RM25_RS09160 1ba84043b891b76ace8ed4371307d26b 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.8E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RM25_RS09160 1ba84043b891b76ace8ed4371307d26b 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.0E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RM25_RS09160 1ba84043b891b76ace8ed4371307d26b 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.4E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RM25_RS09160 1ba84043b891b76ace8ed4371307d26b 88 PRINTS PR00107 Phosphocarrier protein signature 41 56 2.4E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RM25_RS09160 1ba84043b891b76ace8ed4371307d26b 88 PRINTS PR00107 Phosphocarrier protein signature 56 73 2.4E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RM25_RS09160 1ba84043b891b76ace8ed4371307d26b 88 PANTHER PTHR33705 1 86 8.6E-15 T 22-04-2016 RM25_RS09160 1ba84043b891b76ace8ed4371307d26b 88 SUPERFAMILY SSF55594 1 87 6.28E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RM25_RS09160 1ba84043b891b76ace8ed4371307d26b 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RM25_RS08585 dc2f5c8ec1c475871415c013313ea311 128 PRINTS PR00050 Cold shock protein signature 4 19 3.9E-8 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RM25_RS08585 dc2f5c8ec1c475871415c013313ea311 128 PRINTS PR00050 Cold shock protein signature 39 57 3.9E-8 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RM25_RS08585 dc2f5c8ec1c475871415c013313ea311 128 SUPERFAMILY SSF50249 1 69 1.18E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS08585 dc2f5c8ec1c475871415c013313ea311 128 PANTHER PTHR11544:SF43 1 124 2.6E-22 T 22-04-2016 RM25_RS08585 dc2f5c8ec1c475871415c013313ea311 128 Pfam PF00313 'Cold-shock' DNA-binding domain 4 64 2.6E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RM25_RS08585 dc2f5c8ec1c475871415c013313ea311 128 PANTHER PTHR11544 1 124 2.6E-22 T 22-04-2016 RM25_RS08585 dc2f5c8ec1c475871415c013313ea311 128 SMART SM00357 3 66 6.7E-12 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RM25_RS08585 dc2f5c8ec1c475871415c013313ea311 128 Gene3D G3DSA:2.40.50.140 1 68 1.5E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS08625 5369b15fbb9d35b9fad81a254e03f716 267 Pfam PF13683 Integrase core domain 182 245 7.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS08625 5369b15fbb9d35b9fad81a254e03f716 267 SUPERFAMILY SSF53098 93 251 6.07E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS08625 5369b15fbb9d35b9fad81a254e03f716 267 PANTHER PTHR24559:SF185 24 251 2.1E-65 T 22-04-2016 RM25_RS08625 5369b15fbb9d35b9fad81a254e03f716 267 Gene3D G3DSA:3.30.420.10 93 246 9.3E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS08625 5369b15fbb9d35b9fad81a254e03f716 267 Pfam PF13276 HTH-like domain 27 81 4.5E-14 T 22-04-2016 IPR025948 HTH-like domain RM25_RS08625 5369b15fbb9d35b9fad81a254e03f716 267 PANTHER PTHR24559 24 251 2.1E-65 T 22-04-2016 RM25_RS04795 47fbe1a6966736d3f35e004558dd148d 285 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 30 281 1.8E-30 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 RM25_RS04795 47fbe1a6966736d3f35e004558dd148d 285 PANTHER PTHR10788 1 285 9.5E-12 T 22-04-2016 RM25_RS04795 47fbe1a6966736d3f35e004558dd148d 285 SUPERFAMILY SSF56784 30 280 2.3E-28 T 22-04-2016 IPR023214 HAD-like domain RM25_RS04795 47fbe1a6966736d3f35e004558dd148d 285 PANTHER PTHR10788:SF6 1 285 9.5E-12 T 22-04-2016 RM25_RS04795 47fbe1a6966736d3f35e004558dd148d 285 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 30 235 5.1E-14 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 RM25_RS04795 47fbe1a6966736d3f35e004558dd148d 285 Pfam PF02358 Trehalose-phosphatase 32 238 4.4E-23 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 RM25_RS04795 47fbe1a6966736d3f35e004558dd148d 285 Gene3D G3DSA:3.40.50.1000 193 282 5.1E-30 T 22-04-2016 IPR023214 HAD-like domain RM25_RS04795 47fbe1a6966736d3f35e004558dd148d 285 Gene3D G3DSA:3.40.50.1000 30 109 5.1E-30 T 22-04-2016 IPR023214 HAD-like domain RM25_RS00095 c9fbeff07084b2a7993ee12c90119bf4 190 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 11 186 2.5E-58 T 22-04-2016 IPR027623 AmmeMemoRadiSam system protein A RM25_RS00095 c9fbeff07084b2a7993ee12c90119bf4 190 PANTHER PTHR13016 49 181 1.3E-28 T 22-04-2016 IPR023473 AMMECR1 RM25_RS00095 c9fbeff07084b2a7993ee12c90119bf4 190 Gene3D G3DSA:3.30.1490.150 127 181 1.4E-21 T 22-04-2016 RM25_RS00095 c9fbeff07084b2a7993ee12c90119bf4 190 Pfam PF01871 AMMECR1 15 186 3.4E-44 T 22-04-2016 IPR002733 AMMECR1 domain RM25_RS00095 c9fbeff07084b2a7993ee12c90119bf4 190 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 46 188 5.6E-30 T 22-04-2016 IPR023473 AMMECR1 RM25_RS00095 c9fbeff07084b2a7993ee12c90119bf4 190 SUPERFAMILY SSF143447 8 187 2.88E-53 T 22-04-2016 IPR002733 AMMECR1 domain RM25_RS00095 c9fbeff07084b2a7993ee12c90119bf4 190 Gene3D G3DSA:3.30.700.20 7 126 5.5E-37 T 22-04-2016 IPR027485 AMMECR1, N-terminal RM25_RS07000 ede9eb8705eddf29097a0cbba11f81c7 215 Gene3D G3DSA:1.10.10.10 15 115 5.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07000 ede9eb8705eddf29097a0cbba11f81c7 215 SUPERFAMILY SSF46785 15 198 5.86E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07000 ede9eb8705eddf29097a0cbba11f81c7 215 PANTHER PTHR30363 12 215 1.9E-29 T 22-04-2016 RM25_RS07000 ede9eb8705eddf29097a0cbba11f81c7 215 Pfam PF01022 Bacterial regulatory protein, arsR family 15 54 7.3E-5 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS07000 ede9eb8705eddf29097a0cbba11f81c7 215 PANTHER PTHR30363:SF17 12 215 1.9E-29 T 22-04-2016 RM25_RS04620 85effe93e0f05cdc6d2de92c5cbcfda0 333 Gene3D G3DSA:3.30.420.10 190 321 2.9E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS04620 85effe93e0f05cdc6d2de92c5cbcfda0 333 Gene3D G3DSA:3.30.420.10 131 158 2.9E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS04620 85effe93e0f05cdc6d2de92c5cbcfda0 333 SUPERFAMILY SSF46689 4 107 2.96E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS04620 85effe93e0f05cdc6d2de92c5cbcfda0 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 74 4.4E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS04620 85effe93e0f05cdc6d2de92c5cbcfda0 333 Pfam PF00665 Integrase core domain 136 284 1.9E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS04620 85effe93e0f05cdc6d2de92c5cbcfda0 333 SUPERFAMILY SSF53098 137 148 4.17E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS04620 85effe93e0f05cdc6d2de92c5cbcfda0 333 SUPERFAMILY SSF53098 187 328 4.17E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS04620 85effe93e0f05cdc6d2de92c5cbcfda0 333 PANTHER PTHR24559 183 316 1.6E-16 T 22-04-2016 RM25_RS04620 85effe93e0f05cdc6d2de92c5cbcfda0 333 PANTHER PTHR24559 125 149 1.6E-16 T 22-04-2016 RM25_RS04620 85effe93e0f05cdc6d2de92c5cbcfda0 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03055 001e28bb753b5c038a447a061e5a0eb9 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 42 1.7E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RM25_RS03055 001e28bb753b5c038a447a061e5a0eb9 334 SUPERFAMILY SSF47413 1 53 9.0E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS03055 001e28bb753b5c038a447a061e5a0eb9 334 Pfam PF13377 Periplasmic binding protein-like domain 166 323 2.4E-35 T 22-04-2016 RM25_RS03055 001e28bb753b5c038a447a061e5a0eb9 334 SUPERFAMILY SSF53822 56 330 1.08E-57 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RM25_RS03055 001e28bb753b5c038a447a061e5a0eb9 334 Gene3D G3DSA:3.40.50.2300 171 325 6.6E-53 T 22-04-2016 RM25_RS03055 001e28bb753b5c038a447a061e5a0eb9 334 PANTHER PTHR30146:SF34 1 332 4.2E-95 T 22-04-2016 RM25_RS03055 001e28bb753b5c038a447a061e5a0eb9 334 SMART SM00354 1 65 2.6E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RM25_RS03055 001e28bb753b5c038a447a061e5a0eb9 334 PANTHER PTHR30146 1 332 4.2E-95 T 22-04-2016 RM25_RS03055 001e28bb753b5c038a447a061e5a0eb9 334 Gene3D G3DSA:1.10.260.40 1 47 1.1E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS03055 001e28bb753b5c038a447a061e5a0eb9 334 Gene3D G3DSA:3.40.50.2300 48 170 4.6E-24 T 22-04-2016 RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 PANTHER PTHR11624:SF67 809 892 0.0 T 22-04-2016 RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 PANTHER PTHR11624:SF67 378 469 0.0 T 22-04-2016 RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 PANTHER PTHR11624 490 551 0.0 T 22-04-2016 IPR033247 Transketolase family RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 SUPERFAMILY SSF52922 722 900 3.14E-49 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 PANTHER PTHR11624 572 790 0.0 T 22-04-2016 IPR033247 Transketolase family RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 152 314 2.7E-8 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 Gene3D G3DSA:3.40.50.970 491 724 2.2E-105 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 Gene3D G3DSA:3.40.50.920 728 902 2.0E-64 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 SUPERFAMILY SSF52518 492 720 1.99E-84 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 PANTHER PTHR11624 378 469 0.0 T 22-04-2016 IPR033247 Transketolase family RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 PANTHER PTHR11624:SF67 86 309 0.0 T 22-04-2016 RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 19 902 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 PANTHER PTHR11624:SF67 572 790 0.0 T 22-04-2016 RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 PANTHER PTHR11624:SF67 490 551 0.0 T 22-04-2016 RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 SUPERFAMILY SSF52518 69 486 3.19E-123 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 PANTHER PTHR11624 809 892 0.0 T 22-04-2016 IPR033247 Transketolase family RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 PANTHER PTHR11624 86 309 0.0 T 22-04-2016 IPR033247 Transketolase family RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 PIRSF PIRSF000156 10 910 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RM25_RS06045 c01bdfaf3bce1dff313077df48b2380e 915 Gene3D G3DSA:3.40.50.970 69 486 1.4E-143 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS05705 5af1ed036ed4131ffe5c6a5c15e52eaf 415 SUPERFAMILY SSF55205 1 411 4.19E-91 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RM25_RS05705 5af1ed036ed4131ffe5c6a5c15e52eaf 415 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 1 406 1.1E-96 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RM25_RS05705 5af1ed036ed4131ffe5c6a5c15e52eaf 415 ProSitePatterns PS00104 EPSP synthase signature 1. 71 85 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05705 5af1ed036ed4131ffe5c6a5c15e52eaf 415 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 1 414 25.249 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05705 5af1ed036ed4131ffe5c6a5c15e52eaf 415 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 1 412 1.7E-98 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05705 5af1ed036ed4131ffe5c6a5c15e52eaf 415 PANTHER PTHR21090 1 415 6.0E-117 T 22-04-2016 RM25_RS05705 5af1ed036ed4131ffe5c6a5c15e52eaf 415 Gene3D G3DSA:3.65.10.10 5 189 4.1E-54 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RM25_RS05705 5af1ed036ed4131ffe5c6a5c15e52eaf 415 PANTHER PTHR21090:SF5 1 415 6.0E-117 T 22-04-2016 RM25_RS05705 5af1ed036ed4131ffe5c6a5c15e52eaf 415 PIRSF PIRSF000505 1 415 1.3E-102 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05705 5af1ed036ed4131ffe5c6a5c15e52eaf 415 ProSitePatterns PS00885 EPSP synthase signature 2. 318 336 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05705 5af1ed036ed4131ffe5c6a5c15e52eaf 415 Gene3D G3DSA:3.65.10.10 190 411 7.3E-42 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RM25_RS01415 9d87db7e3c63d18f23c46054bf549735 440 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 412 6.3E-91 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RM25_RS01415 9d87db7e3c63d18f23c46054bf549735 440 Pfam PF01554 MatE 244 397 9.1E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RM25_RS01415 9d87db7e3c63d18f23c46054bf549735 440 Pfam PF01554 MatE 17 176 2.8E-28 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RM25_RS01415 9d87db7e3c63d18f23c46054bf549735 440 PANTHER PTHR11206 8 435 6.0E-103 T 22-04-2016 RM25_RS01415 9d87db7e3c63d18f23c46054bf549735 440 PIRSF PIRSF006603 6 440 1.6E-64 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RM25_RS01415 9d87db7e3c63d18f23c46054bf549735 440 PANTHER PTHR11206:SF94 8 435 6.0E-103 T 22-04-2016 RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 PANTHER PTHR11632:SF53 13 691 2.4E-270 T 22-04-2016 RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 Pfam PF02910 Fumarate reductase flavoprotein C-term 558 691 3.2E-33 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 SUPERFAMILY SSF46977 549 691 1.44E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 SUPERFAMILY SSF51905 87 332 1.1E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 SUPERFAMILY SSF51905 461 504 1.1E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 Gene3D G3DSA:3.90.700.10 322 451 5.3E-19 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 Gene3D G3DSA:3.50.50.60 453 505 2.5E-67 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 Gene3D G3DSA:3.50.50.60 82 321 2.5E-67 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 Gene3D G3DSA:1.20.58.100 530 644 2.0E-28 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 SUPERFAMILY SSF56425 316 457 9.42E-32 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 91 691 3.2E-269 T 22-04-2016 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|UniPathway: UPA00223 RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 Pfam PF00890 FAD binding domain 91 496 3.5E-51 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RM25_RS06155 ce5750f5321ecab7ba91b7defb7de31c 692 PANTHER PTHR11632 13 691 2.4E-270 T 22-04-2016 RM25_RS00275 2d9b4707f6340b149ff72332f82885f7 141 Pfam PF10066 Uncharacterized conserved protein (DUF2304) 5 105 2.6E-24 T 22-04-2016 IPR019277 Protein of unknown function DUF2304 RM25_RS10370 ba1634fa71de7ba8b72741a819f3b1bf 116 SMART SM00418 13 91 7.7E-24 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS10370 ba1634fa71de7ba8b72741a819f3b1bf 116 Pfam PF01022 Bacterial regulatory protein, arsR family 20 65 4.9E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS10370 ba1634fa71de7ba8b72741a819f3b1bf 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 7.8E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS10370 ba1634fa71de7ba8b72741a819f3b1bf 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 7.8E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS10370 ba1634fa71de7ba8b72741a819f3b1bf 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 7.8E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS10370 ba1634fa71de7ba8b72741a819f3b1bf 116 PANTHER PTHR39168 5 111 1.9E-25 T 22-04-2016 RM25_RS10370 ba1634fa71de7ba8b72741a819f3b1bf 116 PANTHER PTHR39168:SF1 5 111 1.9E-25 T 22-04-2016 RM25_RS10370 ba1634fa71de7ba8b72741a819f3b1bf 116 SUPERFAMILY SSF46785 11 96 1.82E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10370 ba1634fa71de7ba8b72741a819f3b1bf 116 Gene3D G3DSA:1.10.10.10 5 96 3.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 Pfam PF01593 Flavin containing amine oxidoreductase 36 504 7.0E-90 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 28 503 1.6E-65 T 22-04-2016 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|UniPathway: UPA00251 RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 SUPERFAMILY SSF54373 350 453 1.43E-16 T 22-04-2016 RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 PANTHER PTHR10742:SF294 29 527 9.4E-66 T 22-04-2016 RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 Gene3D G3DSA:3.50.50.60 267 321 3.1E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 Gene3D G3DSA:3.50.50.60 453 506 3.1E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 Gene3D G3DSA:3.50.50.60 25 76 3.1E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 Gene3D G3DSA:3.90.660.20 322 452 9.2E-22 T 22-04-2016 IPR027418 Protoporphyrinogen oxidase, C-terminal domain KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|UniPathway: UPA00251 RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 Gene3D G3DSA:1.10.3110.10 130 222 1.6E-21 T 22-04-2016 RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 PANTHER PTHR10742 29 527 9.4E-66 T 22-04-2016 RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 SUPERFAMILY SSF51905 265 365 1.06E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 SUPERFAMILY SSF51905 472 504 1.06E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS08880 86920517859e12e6848f72fe8641efa2 527 SUPERFAMILY SSF51905 27 233 1.06E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS09370 dc7a7203242588745f992d35514ee9f6 312 Pfam PF13673 Acetyltransferase (GNAT) domain 49 96 2.4E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS09370 dc7a7203242588745f992d35514ee9f6 312 Pfam PF00583 Acetyltransferase (GNAT) family 204 281 5.5E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS09370 dc7a7203242588745f992d35514ee9f6 312 Hamap MF_01698 Mycothiol acetyltransferase [mshD]. 6 292 31.445 T 22-04-2016 IPR017813 Mycothiol acetyltransferase GO:0016747 RM25_RS09370 dc7a7203242588745f992d35514ee9f6 312 Gene3D G3DSA:3.40.630.30 11 126 1.3E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS09370 dc7a7203242588745f992d35514ee9f6 312 PIRSF PIRSF021524 3 296 1.2E-84 T 22-04-2016 IPR017813 Mycothiol acetyltransferase GO:0016747 RM25_RS09370 dc7a7203242588745f992d35514ee9f6 312 Gene3D G3DSA:3.40.630.30 150 291 5.0E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS09370 dc7a7203242588745f992d35514ee9f6 312 TIGRFAM TIGR03448 mycothiol_MshD: mycothiol synthase 11 290 1.5E-77 T 22-04-2016 IPR017813 Mycothiol acetyltransferase GO:0016747 RM25_RS09370 dc7a7203242588745f992d35514ee9f6 312 SUPERFAMILY SSF55729 12 290 2.99E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS09370 dc7a7203242588745f992d35514ee9f6 312 PANTHER PTHR23091 146 290 2.3E-23 T 22-04-2016 RM25_RS04440 0f91bafcab2a197b6c1989940ae0f065 446 SUPERFAMILY SSF53850 22 378 8.8E-60 T 22-04-2016 RM25_RS04440 0f91bafcab2a197b6c1989940ae0f065 446 Pfam PF01547 Bacterial extracellular solute-binding protein 48 332 5.6E-30 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 RM25_RS04440 0f91bafcab2a197b6c1989940ae0f065 446 Gene3D G3DSA:3.40.190.10 150 320 5.8E-28 T 22-04-2016 RM25_RS04440 0f91bafcab2a197b6c1989940ae0f065 446 PANTHER PTHR30061:SF25 2 445 1.8E-65 T 22-04-2016 RM25_RS04440 0f91bafcab2a197b6c1989940ae0f065 446 Gene3D G3DSA:3.40.190.10 321 357 2.6E-21 T 22-04-2016 RM25_RS04440 0f91bafcab2a197b6c1989940ae0f065 446 Gene3D G3DSA:3.40.190.10 5 144 2.6E-21 T 22-04-2016 RM25_RS04440 0f91bafcab2a197b6c1989940ae0f065 446 PANTHER PTHR30061 2 445 1.8E-65 T 22-04-2016 RM25_RS10040 a470c52c957c6d9bcbf981a29610eaeb 344 PANTHER PTHR30368 65 343 8.0E-81 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RM25_RS10040 a470c52c957c6d9bcbf981a29610eaeb 344 PANTHER PTHR30368:SF2 65 343 8.0E-81 T 22-04-2016 RM25_RS10040 a470c52c957c6d9bcbf981a29610eaeb 344 Gene3D G3DSA:3.40.190.10 126 280 4.4E-48 T 22-04-2016 RM25_RS10040 a470c52c957c6d9bcbf981a29610eaeb 344 Pfam PF13531 Bacterial extracellular solute-binding protein 55 284 8.7E-43 T 22-04-2016 RM25_RS10040 a470c52c957c6d9bcbf981a29610eaeb 344 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 55 336 1.0E-51 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RM25_RS10040 a470c52c957c6d9bcbf981a29610eaeb 344 SUPERFAMILY SSF53850 37 337 3.26E-56 T 22-04-2016 RM25_RS09565 dcb743e5f942554780b3c9fe032df9d4 329 Pfam PF09179 TilS substrate binding domain 260 325 2.5E-10 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RM25_RS09565 dcb743e5f942554780b3c9fe032df9d4 329 Pfam PF01171 PP-loop family 31 211 2.8E-34 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RM25_RS09565 dcb743e5f942554780b3c9fe032df9d4 329 PANTHER PTHR11807 26 255 4.2E-45 T 22-04-2016 RM25_RS09565 dcb743e5f942554780b3c9fe032df9d4 329 SUPERFAMILY SSF52402 25 244 3.91E-45 T 22-04-2016 RM25_RS09565 dcb743e5f942554780b3c9fe032df9d4 329 PANTHER PTHR11807:SF2 26 255 4.2E-45 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RM25_RS09565 dcb743e5f942554780b3c9fe032df9d4 329 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 31 215 2.5E-39 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RM25_RS09565 dcb743e5f942554780b3c9fe032df9d4 329 SUPERFAMILY SSF82829 224 324 1.06E-16 T 22-04-2016 RM25_RS09565 dcb743e5f942554780b3c9fe032df9d4 329 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 21 319 19.815 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RM25_RS09565 dcb743e5f942554780b3c9fe032df9d4 329 Gene3D G3DSA:3.40.50.620 24 191 3.1E-5 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS12025 8a6e35860a26181fc6c2903a7c14e196 450 SUPERFAMILY SSF142695 293 426 1.7E-56 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RM25_RS12025 8a6e35860a26181fc6c2903a7c14e196 450 SUPERFAMILY SSF142695 219 255 1.7E-56 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RM25_RS12025 8a6e35860a26181fc6c2903a7c14e196 450 PANTHER PTHR21327 218 256 6.2E-189 T 22-04-2016 RM25_RS12025 8a6e35860a26181fc6c2903a7c14e196 450 PANTHER PTHR21327 294 450 6.2E-189 T 22-04-2016 RM25_RS12025 8a6e35860a26181fc6c2903a7c14e196 450 PANTHER PTHR21327 1 202 6.2E-189 T 22-04-2016 RM25_RS12025 8a6e35860a26181fc6c2903a7c14e196 450 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 1 195 1.5E-62 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS12025 8a6e35860a26181fc6c2903a7c14e196 450 SUPERFAMILY SSF55821 2 196 9.16E-71 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RM25_RS12025 8a6e35860a26181fc6c2903a7c14e196 450 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 6 195 2.5E-75 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS12025 8a6e35860a26181fc6c2903a7c14e196 450 Gene3D G3DSA:3.90.870.10 1 198 1.2E-80 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RM25_RS12025 8a6e35860a26181fc6c2903a7c14e196 450 Pfam PF00925 GTP cyclohydrolase II 221 423 7.8E-64 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RM25_RS12025 8a6e35860a26181fc6c2903a7c14e196 450 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 217 449 37.081 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RM25_RS08715 3489d82baefea6817b440e543713d8dc 395 PIRSF PIRSF001434 1 394 6.9E-128 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RM25_RS08715 3489d82baefea6817b440e543713d8dc 395 Gene3D G3DSA:3.40.640.10 17 256 6.1E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS08715 3489d82baefea6817b440e543713d8dc 395 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 17 391 6.4E-158 T 22-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 RM25_RS08715 3489d82baefea6817b440e543713d8dc 395 SUPERFAMILY SSF53383 25 392 3.56E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS08715 3489d82baefea6817b440e543713d8dc 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 17 390 4.0E-129 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RM25_RS08715 3489d82baefea6817b440e543713d8dc 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RM25_RS08715 3489d82baefea6817b440e543713d8dc 395 PANTHER PTHR11808 17 395 1.3E-161 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RM25_RS08715 3489d82baefea6817b440e543713d8dc 395 Gene3D G3DSA:3.90.1150.10 257 392 2.9E-48 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS01670 f30560b4114cd3bbf2dd4290795273df 100 PANTHER PTHR34405 7 100 8.5E-18 T 22-04-2016 RM25_RS01670 f30560b4114cd3bbf2dd4290795273df 100 SUPERFAMILY SSF143430 8 78 1.44E-19 T 22-04-2016 RM25_RS01670 f30560b4114cd3bbf2dd4290795273df 100 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 7 99 14.578 T 22-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 RM25_RS01670 f30560b4114cd3bbf2dd4290795273df 100 Pfam PF09827 CRISPR associated protein Cas2 9 73 2.2E-16 T 22-04-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 RM25_RS01670 f30560b4114cd3bbf2dd4290795273df 100 Gene3D G3DSA:3.30.70.240 8 73 1.1E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RM25_RS01670 f30560b4114cd3bbf2dd4290795273df 100 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 9 83 6.7E-13 T 22-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 RM25_RS08760 d6d65057399b1098d061fe676eb93927 307 Pfam PF00588 SpoU rRNA Methylase family 159 300 1.7E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RM25_RS08760 d6d65057399b1098d061fe676eb93927 307 SUPERFAMILY SSF75217 129 306 6.02E-44 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RM25_RS08760 d6d65057399b1098d061fe676eb93927 307 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 64 306 9.0E-65 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 RM25_RS08760 d6d65057399b1098d061fe676eb93927 307 SMART SM00967 65 141 1.1E-21 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RM25_RS08760 d6d65057399b1098d061fe676eb93927 307 Gene3D G3DSA:3.40.1280.10 155 306 7.6E-49 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RM25_RS08760 d6d65057399b1098d061fe676eb93927 307 Gene3D G3DSA:3.30.1330.30 61 136 4.1E-22 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RM25_RS08760 d6d65057399b1098d061fe676eb93927 307 SUPERFAMILY SSF55315 62 138 5.06E-18 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RM25_RS08760 d6d65057399b1098d061fe676eb93927 307 PANTHER PTHR12029 64 307 6.7E-70 T 22-04-2016 RM25_RS08760 d6d65057399b1098d061fe676eb93927 307 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 65 141 4.3E-22 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RM25_RS09780 12fa67692449764b189b1d7207605933 851 Pfam PF00403 Heavy-metal-associated domain 81 139 2.7E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 354 368 2.3E-22 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 667 2.3E-22 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 737 756 2.3E-22 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 760 772 2.3E-22 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 504 518 2.3E-22 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 Gene3D G3DSA:2.70.150.10 268 405 7.8E-21 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RM25_RS09780 12fa67692449764b189b1d7207605933 851 Pfam PF00122 E1-E2 ATPase 277 495 2.8E-58 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PANTHER PTHR24093 729 844 1.2E-228 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PANTHER PTHR24093 64 701 1.2E-228 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 SUPERFAMILY SSF55008 76 144 9.16E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RM25_RS09780 12fa67692449764b189b1d7207605933 851 ProSitePatterns PS01229 Hypothetical cof family signature 2. 737 759 - T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 276 702 3.2E-59 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RM25_RS09780 12fa67692449764b189b1d7207605933 851 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 730 819 1.5E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RM25_RS09780 12fa67692449764b189b1d7207605933 851 Gene3D G3DSA:3.40.1110.10 532 636 4.5E-19 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RM25_RS09780 12fa67692449764b189b1d7207605933 851 SUPERFAMILY SSF56784 502 522 1.33E-50 T 22-04-2016 IPR023214 HAD-like domain RM25_RS09780 12fa67692449764b189b1d7207605933 851 SUPERFAMILY SSF56784 567 837 1.33E-50 T 22-04-2016 IPR023214 HAD-like domain RM25_RS09780 12fa67692449764b189b1d7207605933 851 SUPERFAMILY SSF81665 786 815 3.66E-12 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 SUPERFAMILY SSF81665 274 307 3.66E-12 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 SUPERFAMILY SSF81665 405 498 3.66E-12 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 Gene3D G3DSA:3.40.50.1000 637 805 1.2E-48 T 22-04-2016 IPR023214 HAD-like domain RM25_RS09780 12fa67692449764b189b1d7207605933 851 Gene3D G3DSA:3.40.50.1000 477 520 1.2E-48 T 22-04-2016 IPR023214 HAD-like domain RM25_RS09780 12fa67692449764b189b1d7207605933 851 SUPERFAMILY SSF81653 314 404 1.2E-19 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PRINTS PR00943 Copper-transporting ATPase signature 273 292 1.6E-6 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PRINTS PR00943 Copper-transporting ATPase signature 427 441 1.6E-6 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PRINTS PR00943 Copper-transporting ATPase signature 487 502 1.6E-6 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PRINTS PR00943 Copper-transporting ATPase signature 687 704 1.6E-6 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 ProSitePatterns PS01047 Heavy-metal-associated domain. 83 111 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RM25_RS09780 12fa67692449764b189b1d7207605933 851 Pfam PF00702 haloacid dehalogenase-like hydrolase 500 751 7.5E-39 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PANTHER PTHR24093:SF50 729 844 1.2E-228 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 PANTHER PTHR24093:SF50 64 701 1.2E-228 T 22-04-2016 RM25_RS09780 12fa67692449764b189b1d7207605933 851 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 506 512 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RM25_RS09780 12fa67692449764b189b1d7207605933 851 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 222 839 1.0E-169 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RM25_RS09780 12fa67692449764b189b1d7207605933 851 Gene3D G3DSA:3.30.70.100 77 142 9.4E-23 T 22-04-2016 RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 PANTHER PTHR24220:SF132 401 511 1.1E-153 T 22-04-2016 RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 PANTHER PTHR24220:SF132 7 289 1.1E-153 T 22-04-2016 RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 Gene3D G3DSA:3.40.50.300 4 257 2.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 Gene3D G3DSA:3.40.50.300 373 625 2.4E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 2.1E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 603 666 8.8E-16 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 ProSitePatterns PS00211 ABC transporters family signature. 524 538 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 SUPERFAMILY SSF52540 375 623 8.33E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 SMART SM00382 410 601 8.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 SMART SM00382 34 233 4.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 PANTHER PTHR24220 401 511 1.1E-153 T 22-04-2016 RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 PANTHER PTHR24220 7 289 1.1E-153 T 22-04-2016 RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 SUPERFAMILY SSF52540 5 253 1.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 Pfam PF00005 ABC transporter 26 183 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 Pfam PF00005 ABC transporter 402 551 1.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 602 698 2.0E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RM25_RS02725 c991761825a2544e5e6743903ab08b48 699 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 308 1.1E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RM25_RS10975 0f20146b43c8511dac97c6aa1e6dc68e 470 Pfam PF13520 Amino acid permease 7 428 2.8E-47 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS10975 0f20146b43c8511dac97c6aa1e6dc68e 470 PANTHER PTHR11785 1 445 2.9E-98 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS10975 0f20146b43c8511dac97c6aa1e6dc68e 470 PANTHER PTHR11785:SF216 1 445 2.9E-98 T 22-04-2016 RM25_RS10975 0f20146b43c8511dac97c6aa1e6dc68e 470 PIRSF PIRSF006060 5 461 1.0E-52 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 SUPERFAMILY SSF56091 27 341 1.36E-107 T 22-04-2016 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 28 343 7.2E-112 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 SMART SM00292 643 720 3.4E-9 T 22-04-2016 IPR001357 BRCT domain RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 Pfam PF12826 Helix-hairpin-helix motif 561 623 4.0E-21 T 22-04-2016 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 347 422 2.5E-30 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 646 716 1.2E-9 T 22-04-2016 IPR001357 BRCT domain RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 Gene3D G3DSA:1.10.287.610 27 88 3.6E-24 T 22-04-2016 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 SUPERFAMILY SSF52113 642 720 3.18E-16 T 22-04-2016 IPR001357 BRCT domain RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 138 167 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 PANTHER PTHR23389:SF9 27 508 6.8E-164 T 22-04-2016 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 PANTHER PTHR23389:SF9 534 584 6.8E-164 T 22-04-2016 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 432 460 1.9E-8 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 SUPERFAMILY SSF47781 428 634 5.4E-45 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 SMART SM00532 27 474 1.6E-235 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 Gene3D G3DSA:2.40.50.140 345 415 1.3E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 Gene3D G3DSA:1.10.150.20 461 512 6.6E-9 T 22-04-2016 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 Hamap MF_01588 DNA ligase [ligA]. 26 717 48.651 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 356 371 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 35 512 3.1E-172 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 PANTHER PTHR23389 27 508 6.8E-164 T 22-04-2016 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 PANTHER PTHR23389 534 584 6.8E-164 T 22-04-2016 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 PIRSF PIRSF001604 22 721 2.0E-219 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 Gene3D G3DSA:1.10.150.20 555 635 7.7E-25 T 22-04-2016 RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 SUPERFAMILY SSF50249 343 425 6.17E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 Gene3D G3DSA:3.40.50.10190 642 720 2.9E-22 T 22-04-2016 IPR001357 BRCT domain RM25_RS03810 02aa1c3928c314bd12479d36c884e507 764 Gene3D G3DSA:3.30.470.30 142 277 1.9E-45 T 22-04-2016 RM25_RS02850 15caade0d6148bbb2f979c8c0715a539 291 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 246 3.4E-47 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS02850 15caade0d6148bbb2f979c8c0715a539 291 Gene3D G3DSA:3.30.70.580 4 109 3.3E-33 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS02850 15caade0d6148bbb2f979c8c0715a539 291 Gene3D G3DSA:3.30.70.660 111 249 5.3E-30 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS02850 15caade0d6148bbb2f979c8c0715a539 291 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 4 251 29.895 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS02850 15caade0d6148bbb2f979c8c0715a539 291 Pfam PF01416 tRNA pseudouridine synthase 151 251 8.3E-20 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS02850 15caade0d6148bbb2f979c8c0715a539 291 PANTHER PTHR11142:SF0 4 257 2.5E-69 T 22-04-2016 RM25_RS02850 15caade0d6148bbb2f979c8c0715a539 291 SUPERFAMILY SSF55120 4 257 1.44E-67 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS02850 15caade0d6148bbb2f979c8c0715a539 291 PANTHER PTHR11142 4 257 2.5E-69 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS02850 15caade0d6148bbb2f979c8c0715a539 291 PIRSF PIRSF001430 3 268 2.3E-69 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS09530 52fb3e307f14c8526a21b37826e91cf5 181 SUPERFAMILY SSF55083 17 170 5.23E-44 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RM25_RS09530 52fb3e307f14c8526a21b37826e91cf5 181 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 20 150 4.6E-38 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RM25_RS09530 52fb3e307f14c8526a21b37826e91cf5 181 PANTHER PTHR20941:SF10 17 178 4.2E-49 T 22-04-2016 RM25_RS09530 52fb3e307f14c8526a21b37826e91cf5 181 Gene3D G3DSA:3.30.70.560 18 167 1.3E-46 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RM25_RS09530 52fb3e307f14c8526a21b37826e91cf5 181 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 21 150 1.4E-31 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RM25_RS09530 52fb3e307f14c8526a21b37826e91cf5 181 PANTHER PTHR20941 17 178 4.2E-49 T 22-04-2016 RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 PRINTS PR01467 Bacterial arginine repressor signature 136 151 2.4E-21 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 PRINTS PR01467 Bacterial arginine repressor signature 106 119 2.4E-21 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 PRINTS PR01467 Bacterial arginine repressor signature 35 48 2.4E-21 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 PRINTS PR01467 Bacterial arginine repressor signature 51 66 2.4E-21 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 Pfam PF02863 Arginine repressor, C-terminal domain 99 163 1.0E-23 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 Pfam PF01316 Arginine repressor, DNA binding domain 16 77 1.5E-15 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 PANTHER PTHR34471:SF1 12 171 1.7E-47 T 22-04-2016 RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 Gene3D G3DSA:1.10.10.10 23 79 3.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 SUPERFAMILY SSF46785 18 81 8.16E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 PANTHER PTHR34471 12 171 1.7E-47 T 22-04-2016 RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 SUPERFAMILY SSF55252 98 166 3.4E-18 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 Hamap MF_00173 Arginine repressor [argR]. 1 170 51.774 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 Gene3D G3DSA:3.30.1360.40 90 166 6.6E-28 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RM25_RS06490 8bdf7f7d3a47c42c2842e9672b9db4ac 184 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 106 163 3.0E-14 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 RM25_RS02195 d2c354e870f5aec0e62d94fc63ed457f 572 SMART SM00287 106 168 0.13 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type RM25_RS02195 d2c354e870f5aec0e62d94fc63ed457f 572 SMART SM00287 300 363 2.8E-4 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type RM25_RS02195 d2c354e870f5aec0e62d94fc63ed457f 572 SMART SM00287 176 238 0.37 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type RM25_RS02195 d2c354e870f5aec0e62d94fc63ed457f 572 SMART SM00287 38 98 1.2E-6 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type RM25_RS02195 d2c354e870f5aec0e62d94fc63ed457f 572 PANTHER PTHR21666 428 561 6.0E-35 T 22-04-2016 RM25_RS02195 d2c354e870f5aec0e62d94fc63ed457f 572 Gene3D G3DSA:3.90.1720.10 455 561 7.2E-40 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RM25_RS02195 d2c354e870f5aec0e62d94fc63ed457f 572 SUPERFAMILY SSF54001 455 570 1.72E-38 T 22-04-2016 RM25_RS02195 d2c354e870f5aec0e62d94fc63ed457f 572 Pfam PF08239 Bacterial SH3 domain 310 360 2.3E-8 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type RM25_RS02195 d2c354e870f5aec0e62d94fc63ed457f 572 Pfam PF08239 Bacterial SH3 domain 44 94 4.1E-10 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type RM25_RS02195 d2c354e870f5aec0e62d94fc63ed457f 572 Pfam PF08239 Bacterial SH3 domain 185 233 4.5E-8 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type RM25_RS02195 d2c354e870f5aec0e62d94fc63ed457f 572 Pfam PF00877 NlpC/P60 family 473 559 1.5E-22 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RM25_RS01780 135aa3bab8ef5f9f82e9346a6befca71 673 PANTHER PTHR34697 1 568 7.3E-86 T 22-04-2016 RM25_RS01780 135aa3bab8ef5f9f82e9346a6befca71 673 Gene3D G3DSA:3.40.630.30 353 462 1.2E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS01780 135aa3bab8ef5f9f82e9346a6befca71 673 SUPERFAMILY SSF55729 337 460 8.62E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS01780 135aa3bab8ef5f9f82e9346a6befca71 673 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 230 518 8.8E-87 T 22-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal RM25_RS01780 135aa3bab8ef5f9f82e9346a6befca71 673 PANTHER PTHR34697:SF2 1 568 7.3E-86 T 22-04-2016 RM25_RS04185 efe9d6759fcbdab606b9e2f49c289138 247 Pfam PF02565 Recombination protein O C terminal 86 242 6.8E-27 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RM25_RS04185 efe9d6759fcbdab606b9e2f49c289138 247 SUPERFAMILY SSF50249 3 79 1.16E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS04185 efe9d6759fcbdab606b9e2f49c289138 247 Gene3D G3DSA:2.40.50.140 2 80 2.3E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS04185 efe9d6759fcbdab606b9e2f49c289138 247 Pfam PF11967 Recombination protein O N terminal 4 79 2.0E-25 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal RM25_RS04185 efe9d6759fcbdab606b9e2f49c289138 247 PANTHER PTHR33991 3 244 2.9E-44 T 22-04-2016 RM25_RS04185 efe9d6759fcbdab606b9e2f49c289138 247 Hamap MF_00201 DNA repair protein RecO [recO]. 2 247 25.292 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RM25_RS04185 efe9d6759fcbdab606b9e2f49c289138 247 SUPERFAMILY SSF57863 83 236 3.4E-35 T 22-04-2016 RM25_RS04185 efe9d6759fcbdab606b9e2f49c289138 247 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 188 4.0E-30 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RM25_RS00590 daddcda207aac09ab5ea085c08959fa7 215 PANTHER PTHR22893:SF6 1 140 2.9E-39 T 22-04-2016 RM25_RS00590 daddcda207aac09ab5ea085c08959fa7 215 Gene3D G3DSA:3.20.20.70 1 144 8.1E-33 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS00590 daddcda207aac09ab5ea085c08959fa7 215 PANTHER PTHR22893 1 140 2.9E-39 T 22-04-2016 RM25_RS00590 daddcda207aac09ab5ea085c08959fa7 215 SUPERFAMILY SSF51395 1 149 3.66E-29 T 22-04-2016 RM25_RS00590 daddcda207aac09ab5ea085c08959fa7 215 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 1 140 5.3E-10 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 SUPERFAMILY SSF82679 106 209 7.06E-39 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 ProSitePatterns PS01108 Ribosomal protein L24 signature. 240 257 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 SUPERFAMILY SSF50104 235 290 1.81E-14 T 22-04-2016 IPR008991 Translation protein SH3-like domain RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 SMART SM00738 104 212 2.6E-44 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 PRINTS PR00338 Transcription termination factor NUSG signature 159 171 4.5E-13 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 PRINTS PR00338 Transcription termination factor NUSG signature 266 282 4.5E-13 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 PRINTS PR00338 Transcription termination factor NUSG signature 248 263 4.5E-13 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 PANTHER PTHR30265 19 291 5.9E-60 T 22-04-2016 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 Gene3D G3DSA:3.30.70.940 106 210 5.8E-43 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 107 290 3.2E-55 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 Pfam PF00467 KOW motif 239 267 8.9E-6 T 22-04-2016 IPR005824 KOW RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 Pfam PF02357 Transcription termination factor nusG 106 209 8.1E-26 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 104 290 22.252 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 Gene3D G3DSA:2.30.30.30 234 290 1.4E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RM25_RS02515 020d097dad7afc0602735fa2334370f6 292 SMART SM00739 236 263 7.0E-6 T 22-04-2016 IPR005824 KOW RM25_RS05955 6d283d2eff0d672a5a6cbe5e6440f5f4 246 SMART SM00862 155 231 9.5E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS05955 6d283d2eff0d672a5a6cbe5e6440f5f4 246 PANTHER PTHR26402 10 231 4.5E-76 T 22-04-2016 RM25_RS05955 6d283d2eff0d672a5a6cbe5e6440f5f4 246 SUPERFAMILY SSF52172 11 185 2.13E-30 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS05955 6d283d2eff0d672a5a6cbe5e6440f5f4 246 Gene3D G3DSA:3.40.50.2300 12 130 1.3E-28 T 22-04-2016 RM25_RS05955 6d283d2eff0d672a5a6cbe5e6440f5f4 246 Gene3D G3DSA:1.10.10.10 133 232 9.1E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS05955 6d283d2eff0d672a5a6cbe5e6440f5f4 246 Pfam PF00072 Response regulator receiver domain 12 120 1.3E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS05955 6d283d2eff0d672a5a6cbe5e6440f5f4 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 4.5E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS05955 6d283d2eff0d672a5a6cbe5e6440f5f4 246 SUPERFAMILY SSF46894 129 231 1.7E-30 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RM25_RS05955 6d283d2eff0d672a5a6cbe5e6440f5f4 246 SMART SM00448 10 120 5.4E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS05955 6d283d2eff0d672a5a6cbe5e6440f5f4 246 PANTHER PTHR26402:SF50 10 231 4.5E-76 T 22-04-2016 RM25_RS04115 6d3834c51ca6b84b9c1815447ed510b0 422 SUPERFAMILY SSF51713 11 412 1.7E-118 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RM25_RS04115 6d3834c51ca6b84b9c1815447ed510b0 422 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 9 407 43.855 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RM25_RS04115 6d3834c51ca6b84b9c1815447ed510b0 422 PANTHER PTHR21148:SF26 3 107 6.5E-111 T 22-04-2016 RM25_RS04115 6d3834c51ca6b84b9c1815447ed510b0 422 PANTHER PTHR21148:SF26 133 410 6.5E-111 T 22-04-2016 RM25_RS04115 6d3834c51ca6b84b9c1815447ed510b0 422 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 21 410 1.9E-113 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RM25_RS04115 6d3834c51ca6b84b9c1815447ed510b0 422 Pfam PF01702 Queuine tRNA-ribosyltransferase 162 409 2.1E-74 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RM25_RS04115 6d3834c51ca6b84b9c1815447ed510b0 422 PANTHER PTHR21148 133 410 6.5E-111 T 22-04-2016 RM25_RS04115 6d3834c51ca6b84b9c1815447ed510b0 422 PANTHER PTHR21148 3 107 6.5E-111 T 22-04-2016 RM25_RS04115 6d3834c51ca6b84b9c1815447ed510b0 422 Gene3D G3DSA:3.20.20.105 7 413 4.5E-134 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RM25_RS04115 6d3834c51ca6b84b9c1815447ed510b0 422 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 22 410 3.8E-116 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RM25_RS08805 e62ab01569464afe41d7c9b631f0fe88 218 Gene3D G3DSA:3.40.50.2300 3 122 3.1E-41 T 22-04-2016 RM25_RS08805 e62ab01569464afe41d7c9b631f0fe88 218 SUPERFAMILY SSF52172 3 122 1.71E-42 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS08805 e62ab01569464afe41d7c9b631f0fe88 218 SMART SM00448 2 112 7.9E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS08805 e62ab01569464afe41d7c9b631f0fe88 218 Gene3D G3DSA:1.10.10.10 127 213 1.7E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08805 e62ab01569464afe41d7c9b631f0fe88 218 PANTHER PTHR26402:SF459 2 214 2.5E-125 T 22-04-2016 RM25_RS08805 e62ab01569464afe41d7c9b631f0fe88 218 PANTHER PTHR26402 2 214 2.5E-125 T 22-04-2016 RM25_RS08805 e62ab01569464afe41d7c9b631f0fe88 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 211 3.6E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS08805 e62ab01569464afe41d7c9b631f0fe88 218 SMART SM00862 147 217 3.2E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS08805 e62ab01569464afe41d7c9b631f0fe88 218 SUPERFAMILY SSF46894 125 213 2.38E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RM25_RS08805 e62ab01569464afe41d7c9b631f0fe88 218 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS02210 f640ed1c1cc9b4256bc2af8ebfd59e0e 255 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 76 89 1.8E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS02210 f640ed1c1cc9b4256bc2af8ebfd59e0e 255 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 97 120 1.8E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS02210 f640ed1c1cc9b4256bc2af8ebfd59e0e 255 Gene3D G3DSA:1.10.357.10 65 245 5.3E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS02210 f640ed1c1cc9b4256bc2af8ebfd59e0e 255 SUPERFAMILY SSF46689 65 136 2.38E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS02210 f640ed1c1cc9b4256bc2af8ebfd59e0e 255 PANTHER PTHR30328:SF29 48 154 1.6E-22 T 22-04-2016 RM25_RS02210 f640ed1c1cc9b4256bc2af8ebfd59e0e 255 PANTHER PTHR30328 48 154 1.6E-22 T 22-04-2016 RM25_RS02210 f640ed1c1cc9b4256bc2af8ebfd59e0e 255 Pfam PF00440 Bacterial regulatory proteins, tetR family 76 122 7.7E-20 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS00870 a122002472b570c6e15954ce1770a5c7 207 PANTHER PTHR10285 21 205 1.4E-46 T 22-04-2016 RM25_RS00870 a122002472b570c6e15954ce1770a5c7 207 SUPERFAMILY SSF52540 20 205 2.65E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00870 a122002472b570c6e15954ce1770a5c7 207 PANTHER PTHR10285:SF81 21 205 1.4E-46 T 22-04-2016 RM25_RS00870 a122002472b570c6e15954ce1770a5c7 207 Gene3D G3DSA:3.40.50.300 11 205 1.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11525 aefed9d4ba254553e92e8d1e8e462de4 336 Gene3D G3DSA:1.10.3470.10 2 334 1.8E-97 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RM25_RS11525 aefed9d4ba254553e92e8d1e8e462de4 336 PANTHER PTHR30472 1 336 5.8E-94 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RM25_RS11525 aefed9d4ba254553e92e8d1e8e462de4 336 SUPERFAMILY SSF81345 2 333 1.31E-73 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RM25_RS11525 aefed9d4ba254553e92e8d1e8e462de4 336 Pfam PF01032 FecCD transport family 10 332 1.6E-87 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RM25_RS03960 07f593fe15e353b0a3804c3d4ab55c83 87 SUPERFAMILY SSF110324 2 80 2.09E-31 T 22-04-2016 RM25_RS03960 07f593fe15e353b0a3804c3d4ab55c83 87 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 80 3.1E-34 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS03960 07f593fe15e353b0a3804c3d4ab55c83 87 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 72 1.0E-16 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS03960 07f593fe15e353b0a3804c3d4ab55c83 87 PANTHER PTHR15893 1 84 1.2E-42 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS03960 07f593fe15e353b0a3804c3d4ab55c83 87 Gene3D G3DSA:2.40.50.100 20 79 6.7E-28 T 22-04-2016 RM25_RS03960 07f593fe15e353b0a3804c3d4ab55c83 87 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS03960 07f593fe15e353b0a3804c3d4ab55c83 87 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 27.048 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS03960 07f593fe15e353b0a3804c3d4ab55c83 87 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.7E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS03960 07f593fe15e353b0a3804c3d4ab55c83 87 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.7E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS03960 07f593fe15e353b0a3804c3d4ab55c83 87 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.7E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS03960 07f593fe15e353b0a3804c3d4ab55c83 87 Pfam PF01016 Ribosomal L27 protein 2 80 5.2E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS09050 b812d6919df51e452117a1ddea6dd3eb 431 Gene3D G3DSA:1.10.300.10 105 198 4.3E-33 T 22-04-2016 RM25_RS09050 b812d6919df51e452117a1ddea6dd3eb 431 SUPERFAMILY SSF52540 6 429 6.16E-167 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09050 b812d6919df51e452117a1ddea6dd3eb 431 PANTHER PTHR11846 8 430 8.8E-224 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RM25_RS09050 b812d6919df51e452117a1ddea6dd3eb 431 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 9 428 5.1E-162 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RM25_RS09050 b812d6919df51e452117a1ddea6dd3eb 431 Pfam PF00709 Adenylosuccinate synthetase 8 425 2.9E-171 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RM25_RS09050 b812d6919df51e452117a1ddea6dd3eb 431 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 135 146 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 RM25_RS09050 b812d6919df51e452117a1ddea6dd3eb 431 Gene3D G3DSA:3.40.440.10 7 97 8.9E-70 T 22-04-2016 RM25_RS09050 b812d6919df51e452117a1ddea6dd3eb 431 Gene3D G3DSA:3.40.440.10 199 268 8.9E-70 T 22-04-2016 RM25_RS09050 b812d6919df51e452117a1ddea6dd3eb 431 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 14 21 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RM25_RS09050 b812d6919df51e452117a1ddea6dd3eb 431 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 431 190.394 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RM25_RS09050 b812d6919df51e452117a1ddea6dd3eb 431 SMART SM00788 7 426 1.4E-265 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RM25_RS09050 b812d6919df51e452117a1ddea6dd3eb 431 Gene3D G3DSA:3.90.170.10 269 427 2.0E-65 T 22-04-2016 RM25_RS08700 08d26295cabc5045cf8630905f39afd5 378 SUPERFAMILY SSF55031 168 278 3.01E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS08700 08d26295cabc5045cf8630905f39afd5 378 Gene3D G3DSA:3.40.630.10 281 373 3.0E-76 T 22-04-2016 RM25_RS08700 08d26295cabc5045cf8630905f39afd5 378 Gene3D G3DSA:3.40.630.10 1 163 3.0E-76 T 22-04-2016 RM25_RS08700 08d26295cabc5045cf8630905f39afd5 378 Gene3D G3DSA:3.30.70.360 166 280 3.4E-34 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS08700 08d26295cabc5045cf8630905f39afd5 378 SUPERFAMILY SSF53187 283 373 1.03E-67 T 22-04-2016 RM25_RS08700 08d26295cabc5045cf8630905f39afd5 378 SUPERFAMILY SSF53187 2 182 1.03E-67 T 22-04-2016 RM25_RS08700 08d26295cabc5045cf8630905f39afd5 378 PIRSF PIRSF005962 1 375 2.0E-104 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RM25_RS08700 08d26295cabc5045cf8630905f39afd5 378 PANTHER PTHR11014:SF63 1 376 3.8E-108 T 22-04-2016 RM25_RS08700 08d26295cabc5045cf8630905f39afd5 378 PANTHER PTHR11014 1 376 3.8E-108 T 22-04-2016 RM25_RS08700 08d26295cabc5045cf8630905f39afd5 378 Pfam PF07687 Peptidase dimerisation domain 170 267 9.9E-9 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS08700 08d26295cabc5045cf8630905f39afd5 378 Pfam PF01546 Peptidase family M20/M25/M40 58 368 8.4E-20 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RM25_RS08700 08d26295cabc5045cf8630905f39afd5 378 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 2 360 6.3E-95 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RM25_RS05180 82419888424c897b88a5e566a81d9fb4 315 Pfam PF02911 Formyl transferase, C-terminal domain 202 301 7.6E-25 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RM25_RS05180 82419888424c897b88a5e566a81d9fb4 315 Gene3D G3DSA:3.40.50.170 1 203 4.4E-60 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RM25_RS05180 82419888424c897b88a5e566a81d9fb4 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 303 9.2E-70 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RM25_RS05180 82419888424c897b88a5e566a81d9fb4 315 Pfam PF00551 Formyl transferase 1 178 2.2E-33 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RM25_RS05180 82419888424c897b88a5e566a81d9fb4 315 SUPERFAMILY SSF53328 1 201 2.62E-55 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RM25_RS05180 82419888424c897b88a5e566a81d9fb4 315 PANTHER PTHR11138 1 302 7.4E-96 T 22-04-2016 RM25_RS05180 82419888424c897b88a5e566a81d9fb4 315 Gene3D G3DSA:3.10.25.10 206 310 1.6E-27 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RM25_RS05180 82419888424c897b88a5e566a81d9fb4 315 SUPERFAMILY SSF50486 205 309 1.26E-26 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RM25_RS05180 82419888424c897b88a5e566a81d9fb4 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 304 32.328 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RM25_RS11820 78966244cf6f80eabdf34523f5133f7c 462 PANTHER PTHR11019 318 445 5.1E-31 T 22-04-2016 RM25_RS11820 78966244cf6f80eabdf34523f5133f7c 462 Gene3D G3DSA:1.10.10.60 391 441 5.4E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS11820 78966244cf6f80eabdf34523f5133f7c 462 SUPERFAMILY SSF46689 340 388 2.33E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS11820 78966244cf6f80eabdf34523f5133f7c 462 Pfam PF12833 Helix-turn-helix domain 361 439 2.0E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RM25_RS11820 78966244cf6f80eabdf34523f5133f7c 462 SUPERFAMILY SSF46689 390 441 1.3E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS11820 78966244cf6f80eabdf34523f5133f7c 462 SMART SM00342 354 437 2.5E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RM25_RS11820 78966244cf6f80eabdf34523f5133f7c 462 Gene3D G3DSA:1.10.10.60 334 390 6.9E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS11820 78966244cf6f80eabdf34523f5133f7c 462 Pfam PF10114 Sensory domain found in PocR 8 156 7.3E-39 T 22-04-2016 IPR018771 PocR domain UniPathway: UPA00148|UniPathway: UPA00621 RM25_RS11820 78966244cf6f80eabdf34523f5133f7c 462 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 421 437 2.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RM25_RS11820 78966244cf6f80eabdf34523f5133f7c 462 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 406 421 2.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RM25_RS10950 e51f4bd773d232c7a57a1538f90426be 342 SUPERFAMILY SSF51658 277 339 3.54E-48 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS10950 e51f4bd773d232c7a57a1538f90426be 342 SUPERFAMILY SSF51658 11 238 3.54E-48 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS10950 e51f4bd773d232c7a57a1538f90426be 342 PANTHER PTHR12110:SF17 276 319 2.8E-31 T 22-04-2016 RM25_RS10950 e51f4bd773d232c7a57a1538f90426be 342 PANTHER PTHR12110:SF17 11 246 2.8E-31 T 22-04-2016 RM25_RS10950 e51f4bd773d232c7a57a1538f90426be 342 PANTHER PTHR12110 276 319 2.8E-31 T 22-04-2016 RM25_RS10950 e51f4bd773d232c7a57a1538f90426be 342 PANTHER PTHR12110 11 246 2.8E-31 T 22-04-2016 RM25_RS10950 e51f4bd773d232c7a57a1538f90426be 342 Pfam PF01261 Xylose isomerase-like TIM barrel 33 247 6.8E-31 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS10950 e51f4bd773d232c7a57a1538f90426be 342 Gene3D G3DSA:3.20.20.150 14 335 1.1E-74 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS00010 5aa2f4d4b77e3ba81608e793da5fbfa3 489 Gene3D G3DSA:1.20.1250.20 286 482 4.4E-15 T 22-04-2016 RM25_RS00010 5aa2f4d4b77e3ba81608e793da5fbfa3 489 Pfam PF07690 Major Facilitator Superfamily 42 433 1.1E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS00010 5aa2f4d4b77e3ba81608e793da5fbfa3 489 SUPERFAMILY SSF103473 15 208 1.23E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS00010 5aa2f4d4b77e3ba81608e793da5fbfa3 489 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 2.8E-8 T 22-04-2016 RM25_RS00010 5aa2f4d4b77e3ba81608e793da5fbfa3 489 PRINTS PR01036 Tetracycline resistance protein TetB signature 127 147 2.8E-8 T 22-04-2016 RM25_RS00010 5aa2f4d4b77e3ba81608e793da5fbfa3 489 PRINTS PR01036 Tetracycline resistance protein TetB signature 36 60 2.8E-8 T 22-04-2016 RM25_RS00010 5aa2f4d4b77e3ba81608e793da5fbfa3 489 SUPERFAMILY SSF103473 224 485 1.23E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS00010 5aa2f4d4b77e3ba81608e793da5fbfa3 489 PANTHER PTHR23501 1 489 5.3E-129 T 22-04-2016 RM25_RS00010 5aa2f4d4b77e3ba81608e793da5fbfa3 489 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 33 443 1.4E-80 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RM25_RS00010 5aa2f4d4b77e3ba81608e793da5fbfa3 489 Gene3D G3DSA:1.20.1250.20 33 216 1.0E-28 T 22-04-2016 RM25_RS00010 5aa2f4d4b77e3ba81608e793da5fbfa3 489 PANTHER PTHR23501:SF48 1 489 5.3E-129 T 22-04-2016 RM25_RS03940 a9040241b2d06d6658c4629e82c8b3da 151 Pfam PF01047 MarR family 35 92 2.3E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS03940 a9040241b2d06d6658c4629e82c8b3da 151 PANTHER PTHR33164 35 151 1.0E-20 T 22-04-2016 RM25_RS03940 a9040241b2d06d6658c4629e82c8b3da 151 Gene3D G3DSA:1.10.10.10 22 143 1.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03940 a9040241b2d06d6658c4629e82c8b3da 151 SMART SM00347 28 128 4.1E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS03940 a9040241b2d06d6658c4629e82c8b3da 151 SUPERFAMILY SSF46785 23 143 1.85E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03940 a9040241b2d06d6658c4629e82c8b3da 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.5E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS03940 a9040241b2d06d6658c4629e82c8b3da 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.5E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS03940 a9040241b2d06d6658c4629e82c8b3da 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 1.5E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS03940 a9040241b2d06d6658c4629e82c8b3da 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.5E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 Gene3D G3DSA:1.20.120.140 111 194 1.7E-23 T 22-04-2016 RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 SMART SM00962 184 383 4.6E-105 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 110 383 57.965 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 110 382 1.3E-101 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 Pfam PF00448 SRP54-type protein, GTPase domain 184 382 1.4E-73 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 PANTHER PTHR11564 77 384 1.7E-113 T 22-04-2016 RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 Pfam PF02881 SRP54-type protein, helical bundle domain 97 163 1.9E-9 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 SUPERFAMILY SSF47364 84 160 1.83E-14 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 SMART SM00963 87 167 7.9E-16 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 356 369 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 SUPERFAMILY SSF52540 181 383 5.78E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 Gene3D G3DSA:3.40.50.300 195 383 5.2E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 PANTHER PTHR11564:SF16 77 384 1.7E-113 T 22-04-2016 RM25_RS06705 eb0562d7fee7a42c5665ad7dc20a7d25 384 SMART SM00382 183 333 1.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS02700 74f12fc299cfc73182eff3bcfa10abfa 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 16.178 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RM25_RS02700 74f12fc299cfc73182eff3bcfa10abfa 60 SUPERFAMILY SSF55129 1 59 1.15E-16 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RM25_RS02700 74f12fc299cfc73182eff3bcfa10abfa 60 Gene3D G3DSA:3.30.1390.20 1 59 1.0E-20 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RM25_RS02700 74f12fc299cfc73182eff3bcfa10abfa 60 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 3.3E-12 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RM25_RS02700 74f12fc299cfc73182eff3bcfa10abfa 60 PANTHER PTHR15892 1 60 4.3E-13 T 22-04-2016 RM25_RS02700 74f12fc299cfc73182eff3bcfa10abfa 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.6E-17 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RM25_RS02700 74f12fc299cfc73182eff3bcfa10abfa 60 PIRSF PIRSF002211 1 60 5.7E-20 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RM25_RS06930 4b4ea6a194ab481c5fb90e65749bd4b1 261 PANTHER PTHR24220 3 245 4.3E-86 T 22-04-2016 RM25_RS06930 4b4ea6a194ab481c5fb90e65749bd4b1 261 PANTHER PTHR24220:SF383 3 245 4.3E-86 T 22-04-2016 RM25_RS06930 4b4ea6a194ab481c5fb90e65749bd4b1 261 Gene3D G3DSA:3.40.50.300 4 246 6.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06930 4b4ea6a194ab481c5fb90e65749bd4b1 261 SMART SM00382 26 210 9.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS06930 4b4ea6a194ab481c5fb90e65749bd4b1 261 Pfam PF00005 ABC transporter 17 167 3.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS06930 4b4ea6a194ab481c5fb90e65749bd4b1 261 SUPERFAMILY SSF52540 4 239 3.45E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11585 c542bb151f0502c3bbf95d5b8894d34c 327 SMART SM00470 42 132 1.2E-32 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RM25_RS11585 c542bb151f0502c3bbf95d5b8894d34c 327 PANTHER PTHR33375:SF3 7 297 1.2E-91 T 22-04-2016 RM25_RS11585 c542bb151f0502c3bbf95d5b8894d34c 327 SUPERFAMILY SSF110849 32 135 1.38E-28 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RM25_RS11585 c542bb151f0502c3bbf95d5b8894d34c 327 Gene3D G3DSA:3.90.1530.10 39 138 1.0E-37 T 22-04-2016 RM25_RS11585 c542bb151f0502c3bbf95d5b8894d34c 327 Pfam PF02195 ParB-like nuclease domain 43 131 1.9E-25 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RM25_RS11585 c542bb151f0502c3bbf95d5b8894d34c 327 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 41 217 4.6E-58 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RM25_RS11585 c542bb151f0502c3bbf95d5b8894d34c 327 SUPERFAMILY SSF109709 125 232 8.76E-31 T 22-04-2016 RM25_RS11585 c542bb151f0502c3bbf95d5b8894d34c 327 PANTHER PTHR33375 7 297 1.2E-91 T 22-04-2016 RM25_RS05625 1d309a4222239127f945537ffe17d552 359 Pfam PF00472 RF-1 domain 209 318 5.5E-40 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RM25_RS05625 1d309a4222239127f945537ffe17d552 359 Pfam PF03462 PCRF domain 9 201 2.9E-61 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RM25_RS05625 1d309a4222239127f945537ffe17d552 359 PANTHER PTHR11075 1 353 1.2E-146 T 22-04-2016 RM25_RS05625 1d309a4222239127f945537ffe17d552 359 PANTHER PTHR11075:SF9 1 353 1.2E-146 T 22-04-2016 RM25_RS05625 1d309a4222239127f945537ffe17d552 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 225 241 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RM25_RS05625 1d309a4222239127f945537ffe17d552 359 Gene3D G3DSA:3.30.160.20 208 285 5.8E-32 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RM25_RS05625 1d309a4222239127f945537ffe17d552 359 SMART SM00937 63 176 5.5E-43 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RM25_RS05625 1d309a4222239127f945537ffe17d552 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 352 2.9E-138 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RM25_RS05625 1d309a4222239127f945537ffe17d552 359 SUPERFAMILY SSF75620 8 350 2.35E-122 T 22-04-2016 RM25_RS05625 1d309a4222239127f945537ffe17d552 359 Gene3D G3DSA:1.20.58.410 6 89 1.4E-16 T 22-04-2016 RM25_RS05625 1d309a4222239127f945537ffe17d552 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 354 35.31 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 20 138 7.3E-22 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 PANTHER PTHR21499:SF2 1 331 6.9E-125 T 22-04-2016 RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 PIRSF PIRSF000098 11 441 8.7E-153 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 Gene3D G3DSA:3.30.360.10 158 308 4.5E-53 T 22-04-2016 RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 SUPERFAMILY SSF55021 356 430 1.17E-9 T 22-04-2016 RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 Pfam PF00742 Homoserine dehydrogenase 146 325 2.4E-65 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 Gene3D G3DSA:3.30.70.260 357 424 2.1E-8 T 22-04-2016 RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 Pfam PF01842 ACT domain 358 415 1.5E-11 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 PANTHER PTHR21499 1 331 6.9E-125 T 22-04-2016 RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 192 214 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 SUPERFAMILY SSF51735 12 167 5.04E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 SUPERFAMILY SSF55347 146 312 3.14E-52 T 22-04-2016 RM25_RS05645 1111a29a9cb79e31e1ce39df77c1951c 441 Gene3D G3DSA:3.40.50.720 12 157 2.0E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 20 330 3.8E-85 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 PRINTS PR00101 Aspartate carbamoyltransferase signature 148 165 4.3E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 PRINTS PR00101 Aspartate carbamoyltransferase signature 55 77 4.3E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 PRINTS PR00101 Aspartate carbamoyltransferase signature 244 253 4.3E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 PRINTS PR00101 Aspartate carbamoyltransferase signature 311 325 4.3E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 4.3E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 SUPERFAMILY SSF53671 19 331 4.98E-82 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 Gene3D G3DSA:3.40.50.1370 19 156 4.6E-49 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 Gene3D G3DSA:3.40.50.1370 157 317 1.6E-38 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 172 327 3.4E-20 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 PANTHER PTHR11405 19 348 1.2E-112 T 22-04-2016 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 PANTHER PTHR11405:SF16 19 348 1.2E-112 T 22-04-2016 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 20 161 9.8E-42 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 65 72 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 295 318 7.3E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 65 84 7.3E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 149 160 7.3E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS08155 08cb87245183a30bdc9b298e08f02468 348 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 280 289 7.3E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS09075 66ca10d36d30f94cde6dedff264323ba 184 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 89 168 3.2E-28 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RM25_RS09075 66ca10d36d30f94cde6dedff264323ba 184 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 138 144 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 RM25_RS09075 66ca10d36d30f94cde6dedff264323ba 184 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 89 167 2.2E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RM25_RS09075 66ca10d36d30f94cde6dedff264323ba 184 PANTHER PTHR10815 51 182 4.4E-40 T 22-04-2016 RM25_RS09075 66ca10d36d30f94cde6dedff264323ba 184 SUPERFAMILY SSF46767 87 169 1.44E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RM25_RS09075 66ca10d36d30f94cde6dedff264323ba 184 PANTHER PTHR10815:SF5 51 182 4.4E-40 T 22-04-2016 RM25_RS09075 66ca10d36d30f94cde6dedff264323ba 184 Gene3D G3DSA:1.10.10.10 87 175 1.7E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS09075 66ca10d36d30f94cde6dedff264323ba 184 SUPERFAMILY SSF53155 10 92 3.53E-9 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RM25_RS02255 554017fde21aed3db101d0277b909ad3 360 TIGRFAM TIGR00876 tal_mycobact: transaldolase 11 352 2.9E-119 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RM25_RS02255 554017fde21aed3db101d0277b909ad3 360 Pfam PF00923 Transaldolase 15 353 7.9E-73 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RM25_RS02255 554017fde21aed3db101d0277b909ad3 360 PANTHER PTHR10683 1 358 8.9E-174 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RM25_RS02255 554017fde21aed3db101d0277b909ad3 360 PIRSF PIRSF036915 1 360 3.2E-152 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RM25_RS02255 554017fde21aed3db101d0277b909ad3 360 PANTHER PTHR10683:SF12 1 358 8.9E-174 T 22-04-2016 RM25_RS02255 554017fde21aed3db101d0277b909ad3 360 SUPERFAMILY SSF51569 1 358 1.11E-72 T 22-04-2016 RM25_RS02255 554017fde21aed3db101d0277b909ad3 360 ProSitePatterns PS01054 Transaldolase signature 1. 41 49 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RM25_RS02255 554017fde21aed3db101d0277b909ad3 360 Gene3D G3DSA:3.20.20.70 3 354 7.2E-115 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS02255 554017fde21aed3db101d0277b909ad3 360 Hamap MF_00493 Transaldolase [tal]. 1 360 141.208 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 Pfam PF00367 phosphotransferase system, EIIB 6 38 4.5E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 SUPERFAMILY SSF51261 560 692 5.49E-48 T 22-04-2016 IPR011055 Duplicated hybrid motif RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 SUPERFAMILY SSF55604 5 77 1.57E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 PANTHER PTHR30175 565 660 1.7E-96 T 22-04-2016 RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 564 688 1.9E-45 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 Gene3D G3DSA:2.70.70.10 562 694 1.8E-52 T 22-04-2016 RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 16 33 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 627 639 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 Gene3D G3DSA:3.30.1360.60 5 77 1.4E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 Pfam PF02378 Phosphotransferase system, EIIC 122 418 9.3E-19 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 PANTHER PTHR30175:SF1 565 660 1.7E-96 T 22-04-2016 RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 PANTHER PTHR30175:SF1 6 506 1.7E-96 T 22-04-2016 RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 565 685 7.4E-41 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RM25_RS00720 cf94298dbeb59ff908eca1e682882d43 696 PANTHER PTHR30175 6 506 1.7E-96 T 22-04-2016 RM25_RS06145 3f1155103a49f3d09f19111d725e8cab 369 Gene3D G3DSA:3.20.20.70 3 242 9.2E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS06145 3f1155103a49f3d09f19111d725e8cab 369 PIRSF PIRSF006621 1 324 1.4E-96 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RM25_RS06145 3f1155103a49f3d09f19111d725e8cab 369 SUPERFAMILY SSF51395 4 315 9.03E-75 T 22-04-2016 RM25_RS06145 3f1155103a49f3d09f19111d725e8cab 369 Gene3D G3DSA:1.10.1200.80 248 316 2.2E-16 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 RM25_RS06145 3f1155103a49f3d09f19111d725e8cab 369 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 314 3.5E-101 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 RM25_RS06145 3f1155103a49f3d09f19111d725e8cab 369 PANTHER PTHR11082:SF25 1 351 2.5E-123 T 22-04-2016 RM25_RS06145 3f1155103a49f3d09f19111d725e8cab 369 PANTHER PTHR11082 1 351 2.5E-123 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RM25_RS06145 3f1155103a49f3d09f19111d725e8cab 369 Pfam PF01207 Dihydrouridine synthase (Dus) 6 301 1.2E-86 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 PRINTS PR00982 Lysyl-tRNA synthetase signature 185 195 6.4E-33 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 PRINTS PR00982 Lysyl-tRNA synthetase signature 230 243 6.4E-33 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 PRINTS PR00982 Lysyl-tRNA synthetase signature 248 265 6.4E-33 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 PRINTS PR00982 Lysyl-tRNA synthetase signature 370 386 6.4E-33 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 PRINTS PR00982 Lysyl-tRNA synthetase signature 201 217 6.4E-33 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 PANTHER PTHR22594:SF4 1 486 5.5E-184 T 22-04-2016 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 SUPERFAMILY SSF55681 148 485 2.3E-92 T 22-04-2016 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 Gene3D G3DSA:3.30.930.10 144 482 1.8E-94 T 22-04-2016 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 3 488 33.543 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 Pfam PF00152 tRNA synthetases class II (D, K and N) 148 484 2.6E-65 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 Pfam PF01336 OB-fold nucleic acid binding domain 49 132 5.3E-12 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 PANTHER PTHR22594 1 486 5.5E-184 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 SUPERFAMILY SSF50249 2 141 4.9E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 Gene3D G3DSA:2.40.50.140 2 142 4.1E-45 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS01005 36b5a301bc571fa3db0416f845a5a8cb 488 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 3 486 8.2E-136 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 RM25_RS02220 f7c6963f4e5e9f2139bf66263e4c85ed 141 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 6.8E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS02220 f7c6963f4e5e9f2139bf66263e4c85ed 141 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 6.8E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS02220 f7c6963f4e5e9f2139bf66263e4c85ed 141 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 6.8E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS02220 f7c6963f4e5e9f2139bf66263e4c85ed 141 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 54 6.8E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS02220 f7c6963f4e5e9f2139bf66263e4c85ed 141 Gene3D G3DSA:1.10.10.10 5 98 4.5E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS02220 f7c6963f4e5e9f2139bf66263e4c85ed 141 SMART SM00418 22 100 5.0E-26 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS02220 f7c6963f4e5e9f2139bf66263e4c85ed 141 SUPERFAMILY SSF46785 7 96 2.72E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS02220 f7c6963f4e5e9f2139bf66263e4c85ed 141 Pfam PF01022 Bacterial regulatory protein, arsR family 29 68 1.0E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS02220 f7c6963f4e5e9f2139bf66263e4c85ed 141 PANTHER PTHR33154 17 112 8.4E-23 T 22-04-2016 RM25_RS01395 bd1f07eb7af44ca0caccfefca4e50be8 156 Pfam PF07853 Protein of unknown function (DUF1648) 2 45 7.4E-11 T 22-04-2016 IPR012867 Domain of unknown function DUF1648 RM25_RS01280 3cf0e14cb86b9781ee54c03078a7cff7 384 Gene3D G3DSA:3.40.47.10 262 378 1.4E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS01280 3cf0e14cb86b9781ee54c03078a7cff7 384 Gene3D G3DSA:3.40.47.10 149 188 1.4E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS01280 3cf0e14cb86b9781ee54c03078a7cff7 384 PIRSF PIRSF000429 3 380 8.2E-99 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RM25_RS01280 3cf0e14cb86b9781ee54c03078a7cff7 384 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 377 6.7E-101 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RM25_RS01280 3cf0e14cb86b9781ee54c03078a7cff7 384 Gene3D G3DSA:3.40.47.10 189 254 1.4E-37 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS01280 3cf0e14cb86b9781ee54c03078a7cff7 384 Gene3D G3DSA:3.40.47.10 9 123 1.4E-37 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS01280 3cf0e14cb86b9781ee54c03078a7cff7 384 PANTHER PTHR18919:SF69 5 380 9.2E-110 T 22-04-2016 RM25_RS01280 3cf0e14cb86b9781ee54c03078a7cff7 384 PANTHER PTHR18919 5 380 9.2E-110 T 22-04-2016 RM25_RS01280 3cf0e14cb86b9781ee54c03078a7cff7 384 SUPERFAMILY SSF53901 260 377 3.96E-33 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS01280 3cf0e14cb86b9781ee54c03078a7cff7 384 SUPERFAMILY SSF53901 9 250 3.26E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS01280 3cf0e14cb86b9781ee54c03078a7cff7 384 Pfam PF00108 Thiolase, N-terminal domain 9 247 3.0E-47 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RM25_RS01280 3cf0e14cb86b9781ee54c03078a7cff7 384 Pfam PF02803 Thiolase, C-terminal domain 262 377 2.5E-36 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RM25_RS06945 16ea3741572445762e94016c073bc074 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 5.9E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06945 16ea3741572445762e94016c073bc074 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 5.9E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06945 16ea3741572445762e94016c073bc074 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 5.9E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06945 16ea3741572445762e94016c073bc074 236 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 232 2.2E-90 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RM25_RS06945 16ea3741572445762e94016c073bc074 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 232 2.0E-62 T 22-04-2016 RM25_RS06945 16ea3741572445762e94016c073bc074 236 SUPERFAMILY SSF51735 4 232 4.53E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06945 16ea3741572445762e94016c073bc074 236 PANTHER PTHR24322:SF328 9 126 5.7E-52 T 22-04-2016 RM25_RS06945 16ea3741572445762e94016c073bc074 236 PANTHER PTHR24322:SF328 142 174 5.7E-52 T 22-04-2016 RM25_RS06945 16ea3741572445762e94016c073bc074 236 PANTHER PTHR24322 9 126 5.7E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06945 16ea3741572445762e94016c073bc074 236 PANTHER PTHR24322 142 174 5.7E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06945 16ea3741572445762e94016c073bc074 236 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 178 3.1E-7 T 22-04-2016 RM25_RS06945 16ea3741572445762e94016c073bc074 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.5E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06945 16ea3741572445762e94016c073bc074 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 3.5E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06945 16ea3741572445762e94016c073bc074 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 3.5E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06945 16ea3741572445762e94016c073bc074 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 3.5E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06945 16ea3741572445762e94016c073bc074 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 3.5E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06945 16ea3741572445762e94016c073bc074 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 3.5E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06945 16ea3741572445762e94016c073bc074 236 Gene3D G3DSA:3.40.50.720 4 232 6.2E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06945 16ea3741572445762e94016c073bc074 236 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RM25_RS08980 efb2a03039827b9e811577cf064ea296 382 Pfam PF00107 Zinc-binding dehydrogenase 210 338 1.2E-28 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RM25_RS08980 efb2a03039827b9e811577cf064ea296 382 Gene3D G3DSA:3.40.50.720 203 324 5.1E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08980 efb2a03039827b9e811577cf064ea296 382 SUPERFAMILY SSF50129 7 212 8.98E-51 T 22-04-2016 IPR011032 GroES-like RM25_RS08980 efb2a03039827b9e811577cf064ea296 382 PANTHER PTHR11695:SF555 26 120 1.3E-121 T 22-04-2016 RM25_RS08980 efb2a03039827b9e811577cf064ea296 382 PANTHER PTHR11695:SF555 142 381 1.3E-121 T 22-04-2016 RM25_RS08980 efb2a03039827b9e811577cf064ea296 382 Gene3D G3DSA:3.90.180.10 4 202 2.3E-55 T 22-04-2016 IPR011032 GroES-like RM25_RS08980 efb2a03039827b9e811577cf064ea296 382 SUPERFAMILY SSF51735 176 345 1.52E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08980 efb2a03039827b9e811577cf064ea296 382 SMART SM00829 23 378 6.9E-8 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RM25_RS08980 efb2a03039827b9e811577cf064ea296 382 PANTHER PTHR11695 26 120 1.3E-121 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RM25_RS08980 efb2a03039827b9e811577cf064ea296 382 PANTHER PTHR11695 142 381 1.3E-121 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RM25_RS08980 efb2a03039827b9e811577cf064ea296 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 168 1.6E-27 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RM25_RS10390 42a2f46389932f1e9afa9ac3de949421 396 SUPERFAMILY SSF103473 3 374 6.02E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS10390 42a2f46389932f1e9afa9ac3de949421 396 Gene3D G3DSA:1.20.1250.20 6 182 9.1E-29 T 22-04-2016 RM25_RS10390 42a2f46389932f1e9afa9ac3de949421 396 Pfam PF07690 Major Facilitator Superfamily 9 340 3.0E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS10390 42a2f46389932f1e9afa9ac3de949421 396 PANTHER PTHR23501 9 387 2.6E-43 T 22-04-2016 RM25_RS10390 42a2f46389932f1e9afa9ac3de949421 396 Gene3D G3DSA:1.20.1250.20 207 368 4.7E-14 T 22-04-2016 RM25_RS10055 fe2db197a9bb7a385716590c3d34ae39 292 PIRSF PIRSF002936 1 292 8.5E-132 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RM25_RS10055 fe2db197a9bb7a385716590c3d34ae39 292 PANTHER PTHR23293 1 148 4.8E-71 T 22-04-2016 RM25_RS10055 fe2db197a9bb7a385716590c3d34ae39 292 SUPERFAMILY SSF52402 3 200 5.59E-63 T 22-04-2016 RM25_RS10055 fe2db197a9bb7a385716590c3d34ae39 292 PANTHER PTHR23293:SF6 168 201 4.8E-71 T 22-04-2016 RM25_RS10055 fe2db197a9bb7a385716590c3d34ae39 292 Gene3D G3DSA:3.40.50.620 2 200 8.0E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS10055 fe2db197a9bb7a385716590c3d34ae39 292 Gene3D G3DSA:3.40.50.620 233 241 8.0E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS10055 fe2db197a9bb7a385716590c3d34ae39 292 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 1 292 2.6E-132 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RM25_RS10055 fe2db197a9bb7a385716590c3d34ae39 292 PANTHER PTHR23293 234 292 4.8E-71 T 22-04-2016 RM25_RS10055 fe2db197a9bb7a385716590c3d34ae39 292 PANTHER PTHR23293 168 201 4.8E-71 T 22-04-2016 RM25_RS10055 fe2db197a9bb7a385716590c3d34ae39 292 PANTHER PTHR23293:SF6 234 292 4.8E-71 T 22-04-2016 RM25_RS10055 fe2db197a9bb7a385716590c3d34ae39 292 PANTHER PTHR23293:SF6 1 148 4.8E-71 T 22-04-2016 RM25_RS10055 fe2db197a9bb7a385716590c3d34ae39 292 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 22 246 1.1E-48 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RM25_RS01225 c94f880cfe77e132363692d1a632d10d 462 ProSitePatterns PS00217 Sugar transport proteins signature 2. 131 156 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS01225 c94f880cfe77e132363692d1a632d10d 462 SUPERFAMILY SSF103473 21 453 1.28E-89 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS01225 c94f880cfe77e132363692d1a632d10d 462 Gene3D G3DSA:1.20.1250.20 33 220 1.7E-33 T 22-04-2016 RM25_RS01225 c94f880cfe77e132363692d1a632d10d 462 ProSitePatterns PS00216 Sugar transport proteins signature 1. 318 334 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS01225 c94f880cfe77e132363692d1a632d10d 462 PANTHER PTHR24064 23 451 1.5E-100 T 22-04-2016 RM25_RS01225 c94f880cfe77e132363692d1a632d10d 462 Pfam PF00083 Sugar (and other) transporter 39 453 2.3E-67 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RM25_RS01225 c94f880cfe77e132363692d1a632d10d 462 Gene3D G3DSA:1.20.1250.20 262 451 2.3E-26 T 22-04-2016 RM25_RS11090 3d27feff6c52a9338af91a9d7134ab3d 95 PANTHER PTHR21011 1 94 1.7E-26 T 22-04-2016 RM25_RS11090 3d27feff6c52a9338af91a9d7134ab3d 95 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.1E-23 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS11090 3d27feff6c52a9338af91a9d7134ab3d 95 Gene3D G3DSA:3.30.70.60 1 94 1.8E-34 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RM25_RS11090 3d27feff6c52a9338af91a9d7134ab3d 95 SUPERFAMILY SSF54995 1 94 8.5E-33 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS11090 3d27feff6c52a9338af91a9d7134ab3d 95 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.547 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS11090 3d27feff6c52a9338af91a9d7134ab3d 95 Pfam PF01250 Ribosomal protein S6 3 92 4.2E-28 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS01705 20a41de955eca4cf6087afe02422c8e8 429 Gene3D G3DSA:3.40.50.1100 61 148 1.6E-28 T 22-04-2016 RM25_RS01705 20a41de955eca4cf6087afe02422c8e8 429 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 336 428 4.8E-23 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RM25_RS01705 20a41de955eca4cf6087afe02422c8e8 429 SUPERFAMILY SSF53686 9 373 3.67E-91 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS01705 20a41de955eca4cf6087afe02422c8e8 429 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RM25_RS01705 20a41de955eca4cf6087afe02422c8e8 429 PANTHER PTHR10314 17 375 1.8E-137 T 22-04-2016 RM25_RS01705 20a41de955eca4cf6087afe02422c8e8 429 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 323 8.1E-77 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS01705 20a41de955eca4cf6087afe02422c8e8 429 Gene3D G3DSA:3.40.50.1100 149 340 3.5E-48 T 22-04-2016 RM25_RS01705 20a41de955eca4cf6087afe02422c8e8 429 PANTHER PTHR10314:SF30 17 375 1.8E-137 T 22-04-2016 RM25_RS01705 20a41de955eca4cf6087afe02422c8e8 429 TIGRFAM TIGR02079 THD1: threonine dehydratase 18 429 1.0E-159 T 22-04-2016 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RM25_RS01765 e674a59810663c42a59eeae685601f69 328 Gene3D G3DSA:3.30.360.10 143 321 1.1E-47 T 22-04-2016 RM25_RS01765 e674a59810663c42a59eeae685601f69 328 PANTHER PTHR22604:SF105 2 319 2.0E-85 T 22-04-2016 RM25_RS01765 e674a59810663c42a59eeae685601f69 328 SUPERFAMILY SSF51735 3 155 2.37E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01765 e674a59810663c42a59eeae685601f69 328 SUPERFAMILY SSF55347 127 290 1.03E-39 T 22-04-2016 RM25_RS01765 e674a59810663c42a59eeae685601f69 328 PANTHER PTHR22604 2 319 2.0E-85 T 22-04-2016 RM25_RS01765 e674a59810663c42a59eeae685601f69 328 Gene3D G3DSA:3.40.50.720 2 142 7.1E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01765 e674a59810663c42a59eeae685601f69 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 119 7.4E-23 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 SMART SM00382 28 218 9.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 SMART SM00382 308 488 8.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 SUPERFAMILY SSF52540 263 500 1.03E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 SUPERFAMILY SSF52540 2 234 5.79E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 Gene3D G3DSA:3.40.50.300 275 500 1.1E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 Gene3D G3DSA:3.40.50.300 1 233 7.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 PANTHER PTHR24220:SF459 3 278 3.6E-103 T 22-04-2016 RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 PANTHER PTHR24220:SF459 299 370 3.6E-103 T 22-04-2016 RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 Pfam PF00005 ABC transporter 300 439 8.0E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 Pfam PF00005 ABC transporter 19 170 5.2E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 PANTHER PTHR24220 3 278 3.6E-103 T 22-04-2016 RM25_RS02830 06ed14cc105d9942a1d172d3ead9dd53 538 PANTHER PTHR24220 299 370 3.6E-103 T 22-04-2016 RM25_RS10220 1a1d320a0f52571713b4dfa489bad7db 282 Gene3D G3DSA:3.40.190.10 149 238 4.1E-8 T 22-04-2016 RM25_RS10220 1a1d320a0f52571713b4dfa489bad7db 282 Gene3D G3DSA:3.40.190.10 44 129 3.5E-19 T 22-04-2016 RM25_RS10220 1a1d320a0f52571713b4dfa489bad7db 282 Gene3D G3DSA:3.40.190.10 239 263 3.5E-19 T 22-04-2016 RM25_RS10220 1a1d320a0f52571713b4dfa489bad7db 282 SUPERFAMILY SSF53850 9 263 2.82E-35 T 22-04-2016 RM25_RS10220 1a1d320a0f52571713b4dfa489bad7db 282 SMART SM00062 46 265 1.0E-24 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RM25_RS10220 1a1d320a0f52571713b4dfa489bad7db 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 262 1.3E-32 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 Gene3D G3DSA:2.40.50.250 499 593 8.2E-37 T 22-04-2016 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 Gene3D G3DSA:3.30.70.240 419 498 2.4E-29 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 147 1.1E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 SUPERFAMILY SSF52540 5 182 1.11E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 Pfam PF03144 Elongation factor Tu domain 2 235 304 2.3E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 Gene3D G3DSA:2.40.30.10 223 319 4.6E-26 T 22-04-2016 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 SUPERFAMILY SSF54980 415 529 7.19E-28 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 Gene3D G3DSA:3.30.70.870 320 418 4.2E-31 T 22-04-2016 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 SUPERFAMILY SSF54980 318 403 1.97E-10 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 615 1.8E-267 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 Gene3D G3DSA:3.40.50.300 4 222 9.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 Pfam PF00009 Elongation factor Tu GTP binding domain 8 210 4.7E-52 T 22-04-2016 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 PANTHER PTHR23115 200 609 1.1E-245 T 22-04-2016 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 PANTHER PTHR23115 3 182 1.1E-245 T 22-04-2016 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 PRINTS PR00315 GTP-binding elongation factor signature 132 141 2.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 PRINTS PR00315 GTP-binding elongation factor signature 80 90 2.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 PRINTS PR00315 GTP-binding elongation factor signature 96 107 2.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 PRINTS PR00315 GTP-binding elongation factor signature 55 63 2.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 PRINTS PR00315 GTP-binding elongation factor signature 11 24 2.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 Pfam PF00679 Elongation factor G C-terminus 412 498 1.4E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 PANTHER PTHR23115:SF14 200 609 1.1E-245 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 PANTHER PTHR23115:SF14 3 182 1.1E-245 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RM25_RS09320 d9cf0a30033930be222dec23726f0e14 627 SUPERFAMILY SSF50447 163 315 2.5E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RM25_RS08265 dc3db3391c3ba380877a4c7299f34338 103 Pfam PF12840 Helix-turn-helix domain 21 81 3.4E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08265 dc3db3391c3ba380877a4c7299f34338 103 SUPERFAMILY SSF46785 12 100 1.15E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08265 dc3db3391c3ba380877a4c7299f34338 103 Gene3D G3DSA:1.10.10.10 6 96 2.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08265 dc3db3391c3ba380877a4c7299f34338 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 2.2E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS08265 dc3db3391c3ba380877a4c7299f34338 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 2.2E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS08265 dc3db3391c3ba380877a4c7299f34338 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 23 38 2.2E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS08265 dc3db3391c3ba380877a4c7299f34338 103 PANTHER PTHR33154:SF14 15 103 2.3E-26 T 22-04-2016 RM25_RS08265 dc3db3391c3ba380877a4c7299f34338 103 PANTHER PTHR33154 15 103 2.3E-26 T 22-04-2016 RM25_RS08265 dc3db3391c3ba380877a4c7299f34338 103 SMART SM00418 21 101 1.9E-17 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS11630 3d8e425351d8b1b3246f67fbc975084d 637 Pfam PF00535 Glycosyl transferase family 2 38 108 3.9E-10 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RM25_RS11630 3d8e425351d8b1b3246f67fbc975084d 637 Pfam PF00535 Glycosyl transferase family 2 335 439 7.1E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RM25_RS11630 3d8e425351d8b1b3246f67fbc975084d 637 PANTHER PTHR22916 320 616 2.3E-20 T 22-04-2016 RM25_RS11630 3d8e425351d8b1b3246f67fbc975084d 637 SUPERFAMILY SSF53448 10 237 2.44E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS11630 3d8e425351d8b1b3246f67fbc975084d 637 Gene3D G3DSA:3.90.550.10 38 191 9.4E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS11630 3d8e425351d8b1b3246f67fbc975084d 637 Gene3D G3DSA:3.90.550.10 334 561 2.2E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS11630 3d8e425351d8b1b3246f67fbc975084d 637 SUPERFAMILY SSF53448 334 554 1.69E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS00340 6fe803294a6efccee983c8d66352b757 661 PANTHER PTHR22916 136 329 5.0E-17 T 22-04-2016 RM25_RS00340 6fe803294a6efccee983c8d66352b757 661 PANTHER PTHR22916 354 434 5.0E-17 T 22-04-2016 RM25_RS00340 6fe803294a6efccee983c8d66352b757 661 Gene3D G3DSA:3.90.550.10 180 417 3.2E-11 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS00340 6fe803294a6efccee983c8d66352b757 661 Pfam PF13641 Glycosyltransferase like family 2 179 436 7.1E-35 T 22-04-2016 RM25_RS00340 6fe803294a6efccee983c8d66352b757 661 PANTHER PTHR22916:SF3 136 329 5.0E-17 T 22-04-2016 RM25_RS00340 6fe803294a6efccee983c8d66352b757 661 PANTHER PTHR22916:SF3 354 434 5.0E-17 T 22-04-2016 RM25_RS00340 6fe803294a6efccee983c8d66352b757 661 SUPERFAMILY SSF53448 177 445 1.69E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS02965 99a49aea0d61db0941aa81a69d3cdee9 213 Gene3D G3DSA:1.10.3720.10 18 194 3.3E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS02965 99a49aea0d61db0941aa81a69d3cdee9 213 PANTHER PTHR30177:SF13 3 212 1.8E-60 T 22-04-2016 RM25_RS02965 99a49aea0d61db0941aa81a69d3cdee9 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 202 2.0E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS02965 99a49aea0d61db0941aa81a69d3cdee9 213 PANTHER PTHR30177 3 212 1.8E-60 T 22-04-2016 RM25_RS02965 99a49aea0d61db0941aa81a69d3cdee9 213 SUPERFAMILY SSF161098 17 195 3.66E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS02535 ab727544cddaca81d42ca327a1e821bf 316 Gene3D G3DSA:3.20.20.70 48 302 2.8E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS02535 ab727544cddaca81d42ca327a1e821bf 316 SMART SM00729 72 274 6.4E-11 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RM25_RS02535 ab727544cddaca81d42ca327a1e821bf 316 SUPERFAMILY SSF102114 43 302 1.96E-55 T 22-04-2016 RM25_RS02535 ab727544cddaca81d42ca327a1e821bf 316 PANTHER PTHR10949 9 304 3.9E-118 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RM25_RS02535 ab727544cddaca81d42ca327a1e821bf 316 Hamap MF_00206 Lipoyl synthase [lipA]. 1 308 121.958 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RM25_RS02535 ab727544cddaca81d42ca327a1e821bf 316 Pfam PF04055 Radical SAM superfamily 81 236 1.5E-11 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RM25_RS03990 b3ea0c23971cfba4c04a29a588943145 127 PANTHER PTHR21043 15 119 4.6E-29 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RM25_RS03990 b3ea0c23971cfba4c04a29a588943145 127 SUPERFAMILY SSF81301 8 118 8.83E-34 T 22-04-2016 RM25_RS03990 b3ea0c23971cfba4c04a29a588943145 127 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 4 109 20.856 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RM25_RS03990 b3ea0c23971cfba4c04a29a588943145 127 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 13 108 1.5E-28 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RM25_RS03990 b3ea0c23971cfba4c04a29a588943145 127 Pfam PF02410 Ribosomal silencing factor during starvation 15 108 9.5E-22 T 22-04-2016 RM25_RS03990 b3ea0c23971cfba4c04a29a588943145 127 Gene3D G3DSA:3.30.460.10 8 112 1.1E-31 T 22-04-2016 RM25_RS07760 809a4a4149f3ce723d88eaac08eb0f69 407 Pfam PF00899 ThiF family 24 256 2.0E-60 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RM25_RS07760 809a4a4149f3ce723d88eaac08eb0f69 407 SMART SM00450 288 403 1.0E-19 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS07760 809a4a4149f3ce723d88eaac08eb0f69 407 SUPERFAMILY SSF52821 284 404 1.7E-23 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS07760 809a4a4149f3ce723d88eaac08eb0f69 407 SUPERFAMILY SSF69572 14 259 4.05E-89 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RM25_RS07760 809a4a4149f3ce723d88eaac08eb0f69 407 PANTHER PTHR10953:SF153 9 407 8.8E-132 T 22-04-2016 RM25_RS07760 809a4a4149f3ce723d88eaac08eb0f69 407 Gene3D G3DSA:3.40.250.10 288 405 6.9E-23 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS07760 809a4a4149f3ce723d88eaac08eb0f69 407 Gene3D G3DSA:3.40.50.720 16 256 2.1E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07760 809a4a4149f3ce723d88eaac08eb0f69 407 PANTHER PTHR10953 9 407 8.8E-132 T 22-04-2016 RM25_RS07760 809a4a4149f3ce723d88eaac08eb0f69 407 Pfam PF00581 Rhodanese-like domain 295 399 4.0E-13 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS08560 d1b6c4cdb6de7eaa1219cb1d71b97be7 373 SUPERFAMILY SSF53383 17 371 2.13E-68 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS08560 d1b6c4cdb6de7eaa1219cb1d71b97be7 373 Pfam PF00266 Aminotransferase class-V 134 331 1.1E-13 T 22-04-2016 IPR000192 Aminotransferase class V domain RM25_RS08560 d1b6c4cdb6de7eaa1219cb1d71b97be7 373 PANTHER PTHR21152:SF20 3 372 5.8E-122 T 22-04-2016 RM25_RS08560 d1b6c4cdb6de7eaa1219cb1d71b97be7 373 PANTHER PTHR21152 3 372 5.8E-122 T 22-04-2016 RM25_RS08560 d1b6c4cdb6de7eaa1219cb1d71b97be7 373 Gene3D G3DSA:3.40.640.10 20 264 1.1E-46 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS08560 d1b6c4cdb6de7eaa1219cb1d71b97be7 373 PIRSF PIRSF000525 1 372 1.4E-73 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RM25_RS08560 d1b6c4cdb6de7eaa1219cb1d71b97be7 373 TIGRFAM TIGR01366 serC_3: putative phosphoserine aminotransferase 12 371 3.3E-153 T 22-04-2016 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type GO:0004648|GO:0006564|GO:0009058 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RM25_RS08560 d1b6c4cdb6de7eaa1219cb1d71b97be7 373 Gene3D G3DSA:3.90.1150.10 265 371 1.3E-8 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS10245 e00fe2c0ec3c37b532354fadeed13e3f 444 SUPERFAMILY SSF53383 17 422 2.82E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS10245 e00fe2c0ec3c37b532354fadeed13e3f 444 Pfam PF00202 Aminotransferase class-III 19 421 1.9E-118 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS10245 e00fe2c0ec3c37b532354fadeed13e3f 444 Gene3D G3DSA:3.40.640.10 55 304 8.4E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS10245 e00fe2c0ec3c37b532354fadeed13e3f 444 PANTHER PTHR11986 5 429 3.2E-165 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS10245 e00fe2c0ec3c37b532354fadeed13e3f 444 PANTHER PTHR11986:SF17 5 429 3.2E-165 T 22-04-2016 RM25_RS10245 e00fe2c0ec3c37b532354fadeed13e3f 444 Gene3D G3DSA:3.90.1150.10 305 424 2.7E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS10245 e00fe2c0ec3c37b532354fadeed13e3f 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS11545 1031731ab62ac2e7e3edb826d5bf39c6 496 Gene3D G3DSA:1.20.1250.20 290 473 4.5E-12 T 22-04-2016 RM25_RS11545 1031731ab62ac2e7e3edb826d5bf39c6 496 Gene3D G3DSA:1.20.1250.20 23 212 1.8E-28 T 22-04-2016 RM25_RS11545 1031731ab62ac2e7e3edb826d5bf39c6 496 Pfam PF07690 Major Facilitator Superfamily 33 438 1.4E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS11545 1031731ab62ac2e7e3edb826d5bf39c6 496 SUPERFAMILY SSF103473 20 215 1.15E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS11545 1031731ab62ac2e7e3edb826d5bf39c6 496 SUPERFAMILY SSF103473 273 477 1.15E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS11545 1031731ab62ac2e7e3edb826d5bf39c6 496 PANTHER PTHR23501 20 489 8.6E-78 T 22-04-2016 RM25_RS11545 1031731ab62ac2e7e3edb826d5bf39c6 496 PANTHER PTHR23501:SF31 20 489 8.6E-78 T 22-04-2016 RM25_RS11545 1031731ab62ac2e7e3edb826d5bf39c6 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 27 51 5.6E-5 T 22-04-2016 RM25_RS11545 1031731ab62ac2e7e3edb826d5bf39c6 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 148 172 5.6E-5 T 22-04-2016 RM25_RS11545 1031731ab62ac2e7e3edb826d5bf39c6 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 360 380 5.6E-5 T 22-04-2016 RM25_RS11545 1031731ab62ac2e7e3edb826d5bf39c6 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 118 138 5.6E-5 T 22-04-2016 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 PIRSF PIRSF006630 13 698 2.1E-159 T 22-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 SUPERFAMILY SSF52402 645 674 1.59E-64 T 22-04-2016 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 SUPERFAMILY SSF52402 358 604 1.59E-64 T 22-04-2016 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 PANTHER PTHR23090:SF9 164 625 1.0E-166 T 22-04-2016 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 PANTHER PTHR23090:SF9 642 703 1.0E-166 T 22-04-2016 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 PANTHER PTHR23090:SF9 13 146 1.0E-166 T 22-04-2016 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 PANTHER PTHR23090 164 625 1.0E-166 T 22-04-2016 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 PANTHER PTHR23090 642 703 1.0E-166 T 22-04-2016 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 PANTHER PTHR23090 13 146 1.0E-166 T 22-04-2016 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 Pfam PF02540 NAD synthase 380 549 6.0E-23 T 22-04-2016 IPR022310 NAD/GMP synthase RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 Pfam PF00795 Carbon-nitrogen hydrolase 17 317 1.2E-17 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 Gene3D G3DSA:3.60.110.10 16 143 8.5E-54 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 Gene3D G3DSA:3.60.110.10 194 330 8.5E-54 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 SUPERFAMILY SSF56317 15 143 2.83E-53 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 SUPERFAMILY SSF56317 194 332 2.83E-53 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 Gene3D G3DSA:3.40.50.620 359 607 5.4E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS00555 aadd7f44586cfe6cf428b2e95ae4c988 708 Gene3D G3DSA:3.40.50.620 648 674 5.4E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS12055 939a757646d66e74cf6902c6880038d5 202 PANTHER PTHR30055 1 192 2.7E-20 T 22-04-2016 RM25_RS12055 939a757646d66e74cf6902c6880038d5 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 7.9E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS12055 939a757646d66e74cf6902c6880038d5 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 4.9E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS12055 939a757646d66e74cf6902c6880038d5 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.9E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS12055 939a757646d66e74cf6902c6880038d5 202 SUPERFAMILY SSF46689 6 84 4.99E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS12055 939a757646d66e74cf6902c6880038d5 202 Gene3D G3DSA:1.10.357.10 4 179 1.6E-30 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS08960 06ecf092c637082a3d6b7399584ab6cc 635 PANTHER PTHR18968:SF9 9 635 1.9E-230 T 22-04-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 RM25_RS08960 06ecf092c637082a3d6b7399584ab6cc 635 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 232 366 1.7E-34 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RM25_RS08960 06ecf092c637082a3d6b7399584ab6cc 635 PANTHER PTHR18968 9 635 1.9E-230 T 22-04-2016 RM25_RS08960 06ecf092c637082a3d6b7399584ab6cc 635 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 11 632 1.9E-265 T 22-04-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 RM25_RS08960 06ecf092c637082a3d6b7399584ab6cc 635 SUPERFAMILY SSF52518 9 223 2.36E-27 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS08960 06ecf092c637082a3d6b7399584ab6cc 635 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 429 589 1.1E-37 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RM25_RS08960 06ecf092c637082a3d6b7399584ab6cc 635 Gene3D G3DSA:3.40.50.970 422 607 1.1E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS08960 06ecf092c637082a3d6b7399584ab6cc 635 Gene3D G3DSA:3.40.50.970 7 224 3.0E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS08960 06ecf092c637082a3d6b7399584ab6cc 635 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 211 6.4E-32 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RM25_RS08960 06ecf092c637082a3d6b7399584ab6cc 635 Gene3D G3DSA:3.40.50.1220 225 421 4.7E-51 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS08960 06ecf092c637082a3d6b7399584ab6cc 635 SUPERFAMILY SSF52467 195 396 5.73E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS08960 06ecf092c637082a3d6b7399584ab6cc 635 SUPERFAMILY SSF52518 409 621 1.29E-48 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS05220 ecddb1af84e9bbb466fd6c4e01bf56fb 302 PANTHER PTHR12133:SF1 15 282 5.9E-79 T 22-04-2016 RM25_RS05220 ecddb1af84e9bbb466fd6c4e01bf56fb 302 SUPERFAMILY SSF53335 17 269 1.87E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS05220 ecddb1af84e9bbb466fd6c4e01bf56fb 302 PIRSF PIRSF017269 11 281 5.0E-79 T 22-04-2016 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829 RM25_RS05220 ecddb1af84e9bbb466fd6c4e01bf56fb 302 Pfam PF14801 tRNA methyltransferase complex GCD14 subunit N-term 14 64 2.0E-24 T 22-04-2016 RM25_RS05220 ecddb1af84e9bbb466fd6c4e01bf56fb 302 Gene3D G3DSA:3.10.330.20 13 77 7.6E-26 T 22-04-2016 RM25_RS05220 ecddb1af84e9bbb466fd6c4e01bf56fb 302 Pfam PF08704 tRNA methyltransferase complex GCD14 subunit 82 247 4.6E-22 T 22-04-2016 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829 RM25_RS05220 ecddb1af84e9bbb466fd6c4e01bf56fb 302 PANTHER PTHR12133 15 282 5.9E-79 T 22-04-2016 RM25_RS05220 ecddb1af84e9bbb466fd6c4e01bf56fb 302 Gene3D G3DSA:3.40.50.150 79 285 2.4E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS11225 4b03b8beed4d377318476956c5201d33 209 SUPERFAMILY SSF46785 19 191 1.79E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS11225 4b03b8beed4d377318476956c5201d33 209 Gene3D G3DSA:1.10.10.10 19 79 4.3E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS06730 9346406a536d01332657648ed9c62959 301 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 135 222 7.4E-22 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RM25_RS06730 9346406a536d01332657648ed9c62959 301 ProSitePatterns PS01242 Zinc finger FPG-type signature. 251 275 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 RM25_RS06730 9346406a536d01332657648ed9c62959 301 PANTHER PTHR22993 1 280 1.3E-103 T 22-04-2016 RM25_RS06730 9346406a536d01332657648ed9c62959 301 SUPERFAMILY SSF46946 135 224 2.94E-22 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RM25_RS06730 9346406a536d01332657648ed9c62959 301 Gene3D G3DSA:1.10.8.50 137 276 4.9E-43 T 22-04-2016 RM25_RS06730 9346406a536d01332657648ed9c62959 301 SMART SM00898 2 120 1.0E-44 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RM25_RS06730 9346406a536d01332657648ed9c62959 301 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 276 38.724 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RM25_RS06730 9346406a536d01332657648ed9c62959 301 Gene3D G3DSA:3.20.190.10 2 125 1.6E-37 T 22-04-2016 RM25_RS06730 9346406a536d01332657648ed9c62959 301 Pfam PF06827 Zinc finger found in FPG and IleRS 248 275 7.4E-12 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RM25_RS06730 9346406a536d01332657648ed9c62959 301 SUPERFAMILY SSF81624 2 144 4.45E-35 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RM25_RS06730 9346406a536d01332657648ed9c62959 301 SUPERFAMILY SSF57716 227 275 2.37E-16 T 22-04-2016 RM25_RS06730 9346406a536d01332657648ed9c62959 301 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 118 2.6E-34 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RM25_RS06730 9346406a536d01332657648ed9c62959 301 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 275 1.1E-84 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RM25_RS06730 9346406a536d01332657648ed9c62959 301 SMART SM01232 135 227 2.1E-31 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RM25_RS06730 9346406a536d01332657648ed9c62959 301 PANTHER PTHR22993:SF15 1 280 1.3E-103 T 22-04-2016 RM25_RS10980 be31a9d7abaf376679eecce529508513 299 PANTHER PTHR10366:SF475 2 290 6.7E-78 T 22-04-2016 RM25_RS10980 be31a9d7abaf376679eecce529508513 299 Gene3D G3DSA:3.40.50.720 1 281 2.4E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10980 be31a9d7abaf376679eecce529508513 299 PANTHER PTHR10366 2 290 6.7E-78 T 22-04-2016 RM25_RS10980 be31a9d7abaf376679eecce529508513 299 SUPERFAMILY SSF51735 1 282 1.76E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10980 be31a9d7abaf376679eecce529508513 299 Pfam PF13460 NAD(P)H-binding 7 97 1.3E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06755 f4db7c0d776ed517d033ded1aa7605b4 140 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 14 129 6.4E-26 T 22-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related RM25_RS06755 f4db7c0d776ed517d033ded1aa7605b4 140 SUPERFAMILY SSF50475 10 131 1.18E-27 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RM25_RS06755 f4db7c0d776ed517d033ded1aa7605b4 140 Gene3D G3DSA:2.30.110.10 4 138 3.1E-44 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RM25_RS07620 fa146ced39eed089cd52a8779d61eb9c 106 SUPERFAMILY SSF54862 3 84 2.3E-21 T 22-04-2016 RM25_RS07620 fa146ced39eed089cd52a8779d61eb9c 106 Pfam PF00037 4Fe-4S binding domain 34 55 7.0E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RM25_RS07620 fa146ced39eed089cd52a8779d61eb9c 106 PANTHER PTHR11938 1 89 7.1E-31 T 22-04-2016 RM25_RS07620 fa146ced39eed089cd52a8779d61eb9c 106 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.2E-17 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RM25_RS07620 fa146ced39eed089cd52a8779d61eb9c 106 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.2E-17 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RM25_RS07620 fa146ced39eed089cd52a8779d61eb9c 106 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.2E-17 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RM25_RS07620 fa146ced39eed089cd52a8779d61eb9c 106 Gene3D G3DSA:3.30.70.20 5 75 2.3E-19 T 22-04-2016 RM25_RS07620 fa146ced39eed089cd52a8779d61eb9c 106 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS02235 598a7eaebb37dca0c658e110542b44d0 333 Gene3D G3DSA:3.30.420.10 130 158 1.2E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS02235 598a7eaebb37dca0c658e110542b44d0 333 Gene3D G3DSA:3.30.420.10 190 321 1.2E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS02235 598a7eaebb37dca0c658e110542b44d0 333 SUPERFAMILY SSF46689 4 107 3.23E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS02235 598a7eaebb37dca0c658e110542b44d0 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 78 2.3E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS02235 598a7eaebb37dca0c658e110542b44d0 333 SUPERFAMILY SSF53098 137 148 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS02235 598a7eaebb37dca0c658e110542b44d0 333 SUPERFAMILY SSF53098 187 328 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS02235 598a7eaebb37dca0c658e110542b44d0 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS02235 598a7eaebb37dca0c658e110542b44d0 333 Pfam PF00665 Integrase core domain 136 284 1.8E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS02235 598a7eaebb37dca0c658e110542b44d0 333 PANTHER PTHR24559 183 316 4.7E-16 T 22-04-2016 RM25_RS02235 598a7eaebb37dca0c658e110542b44d0 333 PANTHER PTHR24559 125 149 4.7E-16 T 22-04-2016 RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 324 1.8E-171 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 ProSitePatterns PS00321 recA signature. 214 222 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 SUPERFAMILY SSF52540 5 268 1.6E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 PRINTS PR00142 RecA protein signature 166 195 1.2E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 PRINTS PR00142 RecA protein signature 211 239 1.2E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 PRINTS PR00142 RecA protein signature 298 315 1.2E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 PRINTS PR00142 RecA protein signature 128 157 1.2E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 PRINTS PR00142 RecA protein signature 244 273 1.2E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 PRINTS PR00142 RecA protein signature 94 123 1.2E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 Gene3D G3DSA:3.40.50.300 28 268 5.6E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 SUPERFAMILY SSF54752 269 326 2.88E-19 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 SMART SM00382 58 229 5.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 Pfam PF00154 recA bacterial DNA recombination protein 8 269 6.2E-144 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 PANTHER PTHR22942 6 336 1.8E-197 T 22-04-2016 RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 Hamap MF_00268 Protein RecA [recA]. 6 330 51.709 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 Gene3D G3DSA:3.30.250.10 269 327 9.4E-27 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RM25_RS04330 dec0598eab49a2c2d06e9d5f847c43a7 345 PANTHER PTHR22942:SF1 6 336 1.8E-197 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 Gene3D G3DSA:2.60.40.1180 630 725 1.4E-11 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 43 725 1.6E-245 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 SMART SM00642 207 602 6.3E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 SUPERFAMILY SSF81296 46 175 1.88E-29 T 22-04-2016 IPR014756 Immunoglobulin E-set RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 PANTHER PTHR10357 647 750 7.6E-240 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 PANTHER PTHR10357 15 613 7.6E-240 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 Pfam PF00128 Alpha amylase, catalytic domain 224 309 1.1E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 Gene3D G3DSA:2.60.40.10 44 190 5.5E-37 T 22-04-2016 IPR013783 Immunoglobulin-like fold RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 46 131 3.2E-17 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 Gene3D G3DSA:3.20.20.80 191 610 1.1E-108 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 SUPERFAMILY SSF51445 181 505 7.83E-119 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 SUPERFAMILY SSF51445 534 609 7.83E-119 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 SUPERFAMILY SSF51011 628 724 7.91E-9 T 22-04-2016 RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 PANTHER PTHR10357:SF74 15 613 7.6E-240 T 22-04-2016 RM25_RS05450 f94b0db7f477a715505d9bf915dcdc31 763 PANTHER PTHR10357:SF74 647 750 7.6E-240 T 22-04-2016 RM25_RS08600 a3d48c62067720be84c7667b2b32ee36 559 PANTHER PTHR11274 6 549 6.9E-177 T 22-04-2016 RM25_RS08600 a3d48c62067720be84c7667b2b32ee36 559 Pfam PF04851 Type III restriction enzyme, res subunit 182 327 6.3E-13 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RM25_RS08600 a3d48c62067720be84c7667b2b32ee36 559 Gene3D G3DSA:3.40.50.300 180 346 2.5E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08600 a3d48c62067720be84c7667b2b32ee36 559 SUPERFAMILY SSF52540 138 346 5.32E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08600 a3d48c62067720be84c7667b2b32ee36 559 SMART SM00487 179 349 1.9E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS08600 a3d48c62067720be84c7667b2b32ee36 559 SUPERFAMILY SSF52540 394 502 1.14E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08600 a3d48c62067720be84c7667b2b32ee36 559 SUPERFAMILY SSF52540 291 361 1.14E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08600 a3d48c62067720be84c7667b2b32ee36 559 Pfam PF16203 ERCC3/RAD25/XPB C-terminal helicase 354 550 2.5E-44 T 22-04-2016 IPR032438 ERCC3/RAD25/XPB helicase, C-terminal domain RM25_RS08600 a3d48c62067720be84c7667b2b32ee36 559 Gene3D G3DSA:3.40.50.300 385 501 5.8E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08600 a3d48c62067720be84c7667b2b32ee36 559 Pfam PF13625 Helicase conserved C-terminal domain 7 134 3.0E-43 T 22-04-2016 IPR032830 Helicase XPB/Ssl2, N-terminal domain RM25_RS08600 a3d48c62067720be84c7667b2b32ee36 559 SMART SM00490 421 501 1.7E-9 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS01860 5179f7e1b2fe81b93eb24b100a3d239e 365 PANTHER PTHR41907 1 364 2.0E-67 T 22-04-2016 RM25_RS01860 5179f7e1b2fe81b93eb24b100a3d239e 365 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 38 126 1.1E-9 T 22-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain RM25_RS01860 5179f7e1b2fe81b93eb24b100a3d239e 365 PIRSF PIRSF035009 1 365 2.5E-135 T 22-04-2016 IPR017035 Uncharacterised conserved protein UCP035009, HsdR, All3000-type RM25_RS01790 7450bdb22cdf46d386dd04cfd7dabeae 312 Gene3D G3DSA:3.40.1190.20 1 301 1.8E-62 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS01790 7450bdb22cdf46d386dd04cfd7dabeae 312 Pfam PF00294 pfkB family carbohydrate kinase 2 288 3.9E-45 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RM25_RS01790 7450bdb22cdf46d386dd04cfd7dabeae 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 244 257 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RM25_RS01790 7450bdb22cdf46d386dd04cfd7dabeae 312 SUPERFAMILY SSF53613 2 297 1.06E-57 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS01790 7450bdb22cdf46d386dd04cfd7dabeae 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 24 48 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RM25_RS01790 7450bdb22cdf46d386dd04cfd7dabeae 312 PANTHER PTHR10584:SF161 1 299 3.4E-52 T 22-04-2016 RM25_RS01790 7450bdb22cdf46d386dd04cfd7dabeae 312 PANTHER PTHR10584 1 299 3.4E-52 T 22-04-2016 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 PIRSF PIRSF000159 1 1191 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 242 6.0E-77 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 SUPERFAMILY SSF52518 796 1185 3.0E-119 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 2 1182 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 SUPERFAMILY SSF52922 254 414 1.38E-45 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 264 349 7.7E-17 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 Gene3D G3DSA:3.40.50.920 254 414 5.5E-63 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 Pfam PF12838 4Fe-4S dicluster domain 689 757 2.4E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 Gene3D G3DSA:3.40.50.970 2 253 6.3E-104 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 SUPERFAMILY SSF52518 2 253 1.2E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 SMART SM00890 622 679 1.3E-23 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 PANTHER PTHR32154:SF0 1 1191 0.0 T 22-04-2016 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 971 1083 1.1E-11 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 PANTHER PTHR32154 1 1191 0.0 T 22-04-2016 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 Gene3D G3DSA:4.10.780.10 629 668 1.4E-14 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 SUPERFAMILY SSF53323 419 668 1.29E-75 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 Gene3D G3DSA:3.40.920.10 418 624 2.2E-74 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 Gene3D G3DSA:3.30.70.20 671 773 3.8E-20 T 22-04-2016 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 610 5.4E-29 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 Gene3D G3DSA:3.40.50.970 801 1183 2.9E-129 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 Pfam PF10371 Domain of unknown function 628 677 8.3E-21 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 RM25_RS00920 7dfc1a011ea224b48f2f72e81fb1bcbd 1197 SUPERFAMILY SSF54862 670 763 9.84E-21 T 22-04-2016 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 545 718 5.6E-53 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 SUPERFAMILY SSF52540 495 808 2.95E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 724 802 2.0E-23 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 SMART SM01086 724 820 1.5E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 PANTHER PTHR11638:SF18 1 833 0.0 T 22-04-2016 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 Gene3D G3DSA:1.10.8.60 355 437 1.1E-32 T 22-04-2016 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 624 642 1.8E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 595 613 1.8E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 657 671 1.8E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 550 568 1.8E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 SMART SM00382 209 353 2.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 SMART SM00382 546 696 7.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 PANTHER PTHR11638 1 833 0.0 T 22-04-2016 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 Gene3D G3DSA:1.10.1780.10 1 143 1.3E-51 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 SUPERFAMILY SSF52540 170 458 2.28E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 Gene3D G3DSA:1.10.8.60 735 813 8.3E-29 T 22-04-2016 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 Gene3D G3DSA:3.40.50.300 171 352 3.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 343 1.2E-11 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 Gene3D G3DSA:3.40.50.300 707 734 2.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 Gene3D G3DSA:3.40.50.300 500 672 2.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 580 598 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 Pfam PF02151 UvrB/uvrC motif 433 458 3.8E-5 T 22-04-2016 IPR001943 UVR domain GO:0005515 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 SUPERFAMILY SSF81923 3 144 4.22E-32 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 142 3.9E-17 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RM25_RS09520 1f6d05cd8a7c057f1327cdedce8a0654 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 5.0E-18 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 PANTHER PTHR33796 2 203 1.5E-62 T 22-04-2016 RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 Pfam PF07499 RuvA, C-terminal domain 152 200 7.7E-9 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 197 2.6E-42 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 SUPERFAMILY SSF47781 65 135 1.22E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 Pfam PF01330 RuvA N terminal domain 2 61 1.5E-18 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 Pfam PF14520 Helix-hairpin-helix domain 76 129 8.3E-14 T 22-04-2016 RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 SMART SM00278 107 126 1.2 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 SMART SM00278 72 91 210.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 Gene3D G3DSA:1.10.150.20 66 135 4.8E-25 T 22-04-2016 RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 SUPERFAMILY SSF50249 2 62 1.14E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 Gene3D G3DSA:2.40.50.140 2 62 1.9E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 Gene3D G3DSA:1.10.8.10 144 202 5.2E-13 T 22-04-2016 RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 SUPERFAMILY SSF46929 152 201 2.49E-6 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RM25_RS05025 c414e085d7c1346ca77b5583bb0c906c 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 26.307 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 PRINTS PR00625 DnaJ domain signature 6 24 3.3E-26 T 22-04-2016 IPR001623 DnaJ domain RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 PRINTS PR00625 DnaJ domain signature 60 79 3.3E-26 T 22-04-2016 IPR001623 DnaJ domain RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 PRINTS PR00625 DnaJ domain signature 24 39 3.3E-26 T 22-04-2016 IPR001623 DnaJ domain RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 PRINTS PR00625 DnaJ domain signature 40 60 3.3E-26 T 22-04-2016 IPR001623 DnaJ domain RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 Pfam PF00226 DnaJ domain 4 65 1.2E-26 T 22-04-2016 IPR001623 DnaJ domain RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 SMART SM00271 3 60 2.4E-30 T 22-04-2016 IPR001623 DnaJ domain RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 PANTHER PTHR24078:SF190 1 377 9.2E-127 T 22-04-2016 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 22-04-2016 IPR018253 DnaJ domain, conserved site RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 SUPERFAMILY SSF46565 3 100 3.66E-34 T 22-04-2016 IPR001623 DnaJ domain RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 SUPERFAMILY SSF49493 121 159 9.94E-18 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 SUPERFAMILY SSF49493 224 277 9.94E-18 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 Gene3D G3DSA:1.10.287.110 2 94 1.3E-31 T 22-04-2016 IPR001623 DnaJ domain RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 Pfam PF01556 DnaJ C terminal domain 129 357 9.4E-31 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 SUPERFAMILY SSF49493 269 368 1.24E-16 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 Gene3D G3DSA:2.10.230.10 151 221 8.8E-21 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 Gene3D G3DSA:2.60.260.20 267 358 9.4E-18 T 22-04-2016 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 Gene3D G3DSA:2.60.260.20 224 265 2.2E-15 T 22-04-2016 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 Gene3D G3DSA:2.60.260.20 122 150 2.2E-15 T 22-04-2016 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 Pfam PF00684 DnaJ central domain 154 218 1.0E-13 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 399 37.279 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 SUPERFAMILY SSF57938 141 221 1.31E-18 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 4 374 7.6E-114 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RM25_RS04100 219a3b8559c54421a81bc8f11b1bbeb8 402 PANTHER PTHR24078 1 377 9.2E-127 T 22-04-2016 RM25_RS03490 c56d60b5e9234969fb5da48a12d835f5 729 SUPERFAMILY SSF51445 623 695 1.05E-130 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS03490 c56d60b5e9234969fb5da48a12d835f5 729 SUPERFAMILY SSF51445 172 593 1.05E-130 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS03490 c56d60b5e9234969fb5da48a12d835f5 729 Gene3D G3DSA:3.20.20.80 169 680 4.0E-147 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS03490 c56d60b5e9234969fb5da48a12d835f5 729 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 131 679 1.6E-94 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 RM25_RS03490 c56d60b5e9234969fb5da48a12d835f5 729 PANTHER PTHR32438 7 724 1.7E-148 T 22-04-2016 RM25_RS03490 c56d60b5e9234969fb5da48a12d835f5 729 Pfam PF02446 4-alpha-glucanotransferase 179 678 8.0E-109 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 RM25_RS03490 c56d60b5e9234969fb5da48a12d835f5 729 PANTHER PTHR32438:SF5 7 724 1.7E-148 T 22-04-2016 RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 96 1.1E-19 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 PANTHER PTHR10357 605 700 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 PANTHER PTHR10357 1 578 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 PANTHER PTHR10357:SF74 1 578 0.0 T 22-04-2016 RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 SUPERFAMILY SSF81296 5 146 8.96E-46 T 22-04-2016 IPR014756 Immunoglobulin E-set RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 Gene3D G3DSA:2.60.40.1180 588 708 2.9E-26 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 Gene3D G3DSA:2.60.40.10 5 151 2.8E-56 T 22-04-2016 IPR013783 Immunoglobulin-like fold RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 6 673 0.0 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 SUPERFAMILY SSF51445 499 575 1.54E-137 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 SUPERFAMILY SSF51445 133 470 1.54E-137 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 SMART SM00642 158 567 2.9E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 SUPERFAMILY SSF51011 588 708 7.55E-21 T 22-04-2016 RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 Pfam PF00128 Alpha amylase, catalytic domain 298 529 3.3E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 Pfam PF00128 Alpha amylase, catalytic domain 190 275 8.9E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 PANTHER PTHR10357:SF74 605 700 0.0 T 22-04-2016 RM25_RS10570 f464f119cfeb29e11d383afb853f90b2 710 Gene3D G3DSA:3.20.20.80 152 575 9.4E-128 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 PANTHER PTHR22648:SF0 1 317 1.5E-122 T 22-04-2016 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 SMART SM00316 110 177 4.3E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 SUPERFAMILY SSF54814 177 254 2.58E-28 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 Pfam PF13184 NusA-like KH domain 208 274 2.6E-26 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 Gene3D G3DSA:2.40.50.140 106 175 2.3E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 Pfam PF00575 S1 RNA binding domain 111 171 1.3E-4 T 22-04-2016 IPR003029 S1 domain GO:0003676 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 75 318 1.7E-97 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 Gene3D G3DSA:3.30.300.20 256 320 5.3E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 Gene3D G3DSA:3.30.300.20 176 254 1.6E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 SUPERFAMILY SSF50249 110 176 2.71E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 SUPERFAMILY SSF69705 2 99 3.79E-27 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 Gene3D G3DSA:3.30.1480.10 2 99 1.0E-27 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 SUPERFAMILY SSF54814 256 319 4.05E-16 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 PANTHER PTHR22648 1 317 1.5E-122 T 22-04-2016 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 Pfam PF08529 NusA N-terminal domain 66 100 3.1E-7 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 Pfam PF08529 NusA N-terminal domain 6 58 2.0E-7 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RM25_RS06835 5f3438056851b3ef924bd0a487cf1eb3 352 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 343 26.197 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 RM25_RS09285 466d65a7cfc1f0bc2bf273f94eb56571 213 PANTHER PTHR10285 1 201 6.8E-70 T 22-04-2016 RM25_RS09285 466d65a7cfc1f0bc2bf273f94eb56571 213 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 210 3.2E-74 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 RM25_RS09285 466d65a7cfc1f0bc2bf273f94eb56571 213 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 212 41.292 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 RM25_RS09285 466d65a7cfc1f0bc2bf273f94eb56571 213 Gene3D G3DSA:3.40.50.2020 5 210 3.9E-69 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS09285 466d65a7cfc1f0bc2bf273f94eb56571 213 Pfam PF14681 Uracil phosphoribosyltransferase 5 210 6.0E-60 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS09285 466d65a7cfc1f0bc2bf273f94eb56571 213 SUPERFAMILY SSF53271 4 210 3.67E-59 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS09285 466d65a7cfc1f0bc2bf273f94eb56571 213 PANTHER PTHR10285:SF46 1 201 6.8E-70 T 22-04-2016 RM25_RS05850 b479ae96bfce5cf79345c9fac5a26c5d 1114 SUPERFAMILY SSF52540 32 323 2.02E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05850 b479ae96bfce5cf79345c9fac5a26c5d 1114 PANTHER PTHR30591:SF1 3 1114 1.8E-90 T 22-04-2016 RM25_RS05850 b479ae96bfce5cf79345c9fac5a26c5d 1114 SUPERFAMILY SSF52540 334 764 4.25E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05850 b479ae96bfce5cf79345c9fac5a26c5d 1114 PANTHER PTHR30591 3 1114 1.8E-90 T 22-04-2016 RM25_RS05850 b479ae96bfce5cf79345c9fac5a26c5d 1114 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 35 266 2.3E-22 T 22-04-2016 RM25_RS05850 b479ae96bfce5cf79345c9fac5a26c5d 1114 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 311 777 3.5E-89 T 22-04-2016 RM25_RS05850 b479ae96bfce5cf79345c9fac5a26c5d 1114 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 10 1106 9.36 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 RM25_RS05850 b479ae96bfce5cf79345c9fac5a26c5d 1114 SUPERFAMILY SSF52980 809 1103 1.34E-39 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RM25_RS05850 b479ae96bfce5cf79345c9fac5a26c5d 1114 Gene3D G3DSA:1.10.10.160 104 204 5.1E-11 T 22-04-2016 IPR013986 DExx box DNA helicase domain RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 PANTHER PTHR22573 1 453 4.7E-146 T 22-04-2016 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 Gene3D G3DSA:3.40.120.10 178 251 4.3E-21 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 Gene3D G3DSA:3.30.310.50 371 445 3.0E-18 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 255 7.1E-16 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 SUPERFAMILY SSF53738 4 182 2.86E-42 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 9.5E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 9.5E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 9.5E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 446 41.979 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 Gene3D G3DSA:3.40.120.10 252 368 5.6E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 SUPERFAMILY SSF53738 158 258 7.46E-23 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 381 442 2.0E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 444 1.5E-159 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 137 1.2E-37 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 1.8E-32 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 PANTHER PTHR22573:SF15 1 453 4.7E-146 T 22-04-2016 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 Gene3D G3DSA:3.40.120.10 3 151 3.8E-43 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 SUPERFAMILY SSF53738 259 365 2.16E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 SUPERFAMILY SSF55957 359 447 1.11E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS02880 b9bf19a1d115e1a4030250e80e5a6332 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 SUPERFAMILY SSF63737 6 205 3.92E-33 T 22-04-2016 RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 Pfam PF11838 ERAP1-like C-terminal domain 538 851 5.8E-43 T 22-04-2016 IPR024571 ERAP1-like C-terminal domain RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 SUPERFAMILY SSF55486 225 466 1.01E-69 T 22-04-2016 RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 PANTHER PTHR11533 88 618 8.7E-136 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 PANTHER PTHR11533:SF190 88 618 8.7E-136 T 22-04-2016 RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 324 336 2.8E-21 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 188 203 2.8E-21 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 139 154 2.8E-21 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 271 281 2.8E-21 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 305 320 2.8E-21 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 Pfam PF01433 Peptidase family M1 94 400 1.0E-66 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 Gene3D G3DSA:1.10.390.10 318 468 5.1E-40 T 22-04-2016 RM25_RS03795 5e910cedc4d135e1d275ef0153787110 867 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 5 860 4.9E-282 T 22-04-2016 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112 RM25_RS04295 0f99cf9526b72b0cecd691061a098824 773 Gene3D G3DSA:3.40.50.300 363 654 8.3E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04295 0f99cf9526b72b0cecd691061a098824 773 SUPERFAMILY SSF46785 690 755 6.67E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04295 0f99cf9526b72b0cecd691061a098824 773 SMART SM00382 424 622 0.0032 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS04295 0f99cf9526b72b0cecd691061a098824 773 PANTHER PTHR22683:SF41 216 764 8.3E-199 T 22-04-2016 RM25_RS04295 0f99cf9526b72b0cecd691061a098824 773 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 60 184 5.0E-11 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region RM25_RS04295 0f99cf9526b72b0cecd691061a098824 773 SMART SM00843 689 753 3.9E-25 T 22-04-2016 IPR018541 FtsK gamma domain RM25_RS04295 0f99cf9526b72b0cecd691061a098824 773 SUPERFAMILY SSF52540 362 662 9.26E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04295 0f99cf9526b72b0cecd691061a098824 773 Pfam PF09397 Ftsk gamma domain 693 750 9.5E-21 T 22-04-2016 IPR018541 FtsK gamma domain RM25_RS04295 0f99cf9526b72b0cecd691061a098824 773 Pfam PF01580 FtsK/SpoIIIE family 389 589 3.7E-58 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RM25_RS04295 0f99cf9526b72b0cecd691061a098824 773 PANTHER PTHR22683 216 764 8.3E-199 T 22-04-2016 RM25_RS03220 775c25a59f2fb24f8e1f0adbcc7efa9b 171 Gene3D G3DSA:3.90.1140.10 39 125 2.3E-4 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RM25_RS03220 775c25a59f2fb24f8e1f0adbcc7efa9b 171 Pfam PF13563 2'-5' RNA ligase superfamily 38 157 1.3E-17 T 22-04-2016 RM25_RS03220 775c25a59f2fb24f8e1f0adbcc7efa9b 171 SUPERFAMILY SSF55144 33 168 1.2E-10 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RM25_RS10315 e5be3910231d3cc86f99a9a0fcc807b7 591 PANTHER PTHR30258:SF3 141 525 5.1E-39 T 22-04-2016 RM25_RS10315 e5be3910231d3cc86f99a9a0fcc807b7 591 PANTHER PTHR30258 141 525 5.1E-39 T 22-04-2016 RM25_RS10315 e5be3910231d3cc86f99a9a0fcc807b7 591 Pfam PF00437 Type II/IV secretion system protein 228 483 1.7E-30 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RM25_RS10315 e5be3910231d3cc86f99a9a0fcc807b7 591 SUPERFAMILY SSF52540 206 512 4.02E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10315 e5be3910231d3cc86f99a9a0fcc807b7 591 Gene3D G3DSA:3.40.50.300 324 551 7.5E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02650 1b3f8a62289010ef79f7146dd5e10db6 82 PANTHER PTHR10916 7 68 1.3E-23 T 22-04-2016 RM25_RS02650 1b3f8a62289010ef79f7146dd5e10db6 82 Gene3D G3DSA:1.10.287.310 8 70 1.0E-28 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02650 1b3f8a62289010ef79f7146dd5e10db6 82 PANTHER PTHR10916:SF0 7 68 1.3E-23 T 22-04-2016 RM25_RS02650 1b3f8a62289010ef79f7146dd5e10db6 82 ProSitePatterns PS00579 Ribosomal protein L29 signature. 45 59 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02650 1b3f8a62289010ef79f7146dd5e10db6 82 SUPERFAMILY SSF46561 7 69 2.75E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02650 1b3f8a62289010ef79f7146dd5e10db6 82 TIGRFAM TIGR00012 L29: ribosomal protein uL29 11 66 4.2E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02650 1b3f8a62289010ef79f7146dd5e10db6 82 Pfam PF00831 Ribosomal L29 protein 11 66 3.1E-25 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02650 1b3f8a62289010ef79f7146dd5e10db6 82 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 7 66 17.071 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS10165 eeef72d1180b36c7a2e8cf582785f12a 291 Pfam PF00899 ThiF family 26 260 1.2E-45 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RM25_RS10165 eeef72d1180b36c7a2e8cf582785f12a 291 Gene3D G3DSA:3.40.50.720 22 257 1.3E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10165 eeef72d1180b36c7a2e8cf582785f12a 291 SUPERFAMILY SSF69572 16 260 3.66E-60 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RM25_RS10165 eeef72d1180b36c7a2e8cf582785f12a 291 PANTHER PTHR10953 20 250 8.1E-62 T 22-04-2016 RM25_RS10165 eeef72d1180b36c7a2e8cf582785f12a 291 PANTHER PTHR10953:SF153 20 250 8.1E-62 T 22-04-2016 RM25_RS06210 f6e72529dee1d0c0e00cf23a3379bf7a 204 SUPERFAMILY SSF56349 32 194 1.29E-15 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RM25_RS06210 f6e72529dee1d0c0e00cf23a3379bf7a 204 Gene3D G3DSA:1.10.443.10 56 194 6.7E-12 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS08335 8b5559ea84a5565745ccbffa2d6d9006 189 Gene3D G3DSA:2.30.22.10 115 172 8.6E-20 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RM25_RS08335 8b5559ea84a5565745ccbffa2d6d9006 189 Pfam PF01025 GrpE 21 171 2.5E-33 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS08335 8b5559ea84a5565745ccbffa2d6d9006 189 Hamap MF_01151 Protein GrpE [grpE]. 4 171 16.027 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS08335 8b5559ea84a5565745ccbffa2d6d9006 189 PRINTS PR00773 GrpE protein signature 123 138 8.8E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS08335 8b5559ea84a5565745ccbffa2d6d9006 189 PRINTS PR00773 GrpE protein signature 76 91 8.8E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS08335 8b5559ea84a5565745ccbffa2d6d9006 189 PRINTS PR00773 GrpE protein signature 48 64 8.8E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS08335 8b5559ea84a5565745ccbffa2d6d9006 189 PRINTS PR00773 GrpE protein signature 150 169 8.8E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS08335 8b5559ea84a5565745ccbffa2d6d9006 189 SUPERFAMILY SSF58014 25 115 2.48E-15 T 22-04-2016 RM25_RS08335 8b5559ea84a5565745ccbffa2d6d9006 189 PANTHER PTHR21237 17 174 2.2E-37 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS08335 8b5559ea84a5565745ccbffa2d6d9006 189 Gene3D G3DSA:3.90.20.20 23 110 1.1E-17 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil RM25_RS08335 8b5559ea84a5565745ccbffa2d6d9006 189 SUPERFAMILY SSF51064 118 172 2.48E-15 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RM25_RS05685 d8c992c01156028495a52e76a68e7d51 502 SMART SM00911 305 385 0.002 T 22-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 RM25_RS05685 d8c992c01156028495a52e76a68e7d51 502 Gene3D G3DSA:3.30.565.10 363 497 9.8E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS05685 d8c992c01156028495a52e76a68e7d51 502 Pfam PF07568 Histidine kinase 305 375 1.7E-23 T 22-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain RM25_RS05685 d8c992c01156028495a52e76a68e7d51 502 PANTHER PTHR24423:SF472 1 128 1.1E-83 T 22-04-2016 RM25_RS05685 d8c992c01156028495a52e76a68e7d51 502 PANTHER PTHR24423:SF472 148 496 1.1E-83 T 22-04-2016 RM25_RS05685 d8c992c01156028495a52e76a68e7d51 502 SUPERFAMILY SSF55874 362 496 2.36E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS05685 d8c992c01156028495a52e76a68e7d51 502 SMART SM00387 399 499 7.5E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS05685 d8c992c01156028495a52e76a68e7d51 502 PANTHER PTHR24423 1 128 1.1E-83 T 22-04-2016 RM25_RS05685 d8c992c01156028495a52e76a68e7d51 502 PANTHER PTHR24423 148 496 1.1E-83 T 22-04-2016 RM25_RS05685 d8c992c01156028495a52e76a68e7d51 502 Pfam PF12282 Signal transduction histidine kinase 5 147 9.4E-43 T 22-04-2016 IPR022066 Signal transduction histidine kinase RM25_RS05685 d8c992c01156028495a52e76a68e7d51 502 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 496 2.0E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS01625 39f4bcb31399d58502010f2f1ed27928 347 Pfam PF13011 leucine-zipper of insertion element IS481 16 92 2.0E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS01625 39f4bcb31399d58502010f2f1ed27928 347 Gene3D G3DSA:3.30.420.10 204 335 1.6E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01625 39f4bcb31399d58502010f2f1ed27928 347 Gene3D G3DSA:3.30.420.10 145 172 1.6E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01625 39f4bcb31399d58502010f2f1ed27928 347 Pfam PF00665 Integrase core domain 150 298 2.0E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS01625 39f4bcb31399d58502010f2f1ed27928 347 SUPERFAMILY SSF53098 151 162 4.81E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01625 39f4bcb31399d58502010f2f1ed27928 347 SUPERFAMILY SSF53098 201 342 4.81E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01625 39f4bcb31399d58502010f2f1ed27928 347 PANTHER PTHR24559 197 330 2.8E-16 T 22-04-2016 RM25_RS01625 39f4bcb31399d58502010f2f1ed27928 347 PANTHER PTHR24559 139 163 2.8E-16 T 22-04-2016 RM25_RS01625 39f4bcb31399d58502010f2f1ed27928 347 SUPERFAMILY SSF46689 17 121 4.3E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS01625 39f4bcb31399d58502010f2f1ed27928 347 Gene3D G3DSA:1.10.10.10 24 64 4.2E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03270 39f4bcb31399d58502010f2f1ed27928 347 Pfam PF13011 leucine-zipper of insertion element IS481 16 92 2.0E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS03270 39f4bcb31399d58502010f2f1ed27928 347 Gene3D G3DSA:3.30.420.10 204 335 1.6E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03270 39f4bcb31399d58502010f2f1ed27928 347 Gene3D G3DSA:3.30.420.10 145 172 1.6E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03270 39f4bcb31399d58502010f2f1ed27928 347 Pfam PF00665 Integrase core domain 150 298 2.0E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS03270 39f4bcb31399d58502010f2f1ed27928 347 SUPERFAMILY SSF53098 151 162 4.81E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03270 39f4bcb31399d58502010f2f1ed27928 347 SUPERFAMILY SSF53098 201 342 4.81E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03270 39f4bcb31399d58502010f2f1ed27928 347 PANTHER PTHR24559 197 330 2.8E-16 T 22-04-2016 RM25_RS03270 39f4bcb31399d58502010f2f1ed27928 347 PANTHER PTHR24559 139 163 2.8E-16 T 22-04-2016 RM25_RS03270 39f4bcb31399d58502010f2f1ed27928 347 SUPERFAMILY SSF46689 17 121 4.3E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS03270 39f4bcb31399d58502010f2f1ed27928 347 Gene3D G3DSA:1.10.10.10 24 64 4.2E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 PANTHER PTHR19211:SF53 1 529 0.0 T 22-04-2016 RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 SMART SM00382 26 232 8.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 SMART SM00382 350 517 1.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 Pfam PF00005 ABC transporter 343 471 8.9E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 Pfam PF00005 ABC transporter 17 187 6.2E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 Pfam PF12848 ABC transporter 230 307 2.4E-7 T 22-04-2016 IPR032781 ABC-transporter extension domain RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 PANTHER PTHR19211 1 529 0.0 T 22-04-2016 RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 Gene3D G3DSA:3.40.50.300 326 516 9.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 SUPERFAMILY SSF52540 2 79 8.13E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 SUPERFAMILY SSF52540 128 233 8.13E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 SUPERFAMILY SSF52540 329 516 1.22E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 Gene3D G3DSA:3.40.50.300 135 283 2.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06960 e4e8d611027610a002bfae244bd8b8ff 532 Gene3D G3DSA:3.40.50.300 2 98 2.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03615 7539d2924475f75fee5d5153857f8dd6 217 Gene3D G3DSA:3.40.50.10230 3 207 8.9E-74 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 RM25_RS03615 7539d2924475f75fee5d5153857f8dd6 217 Pfam PF02570 Precorrin-8X methylmutase 10 207 1.5E-67 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 RM25_RS03615 7539d2924475f75fee5d5153857f8dd6 217 SUPERFAMILY SSF63965 3 208 7.59E-68 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 RM25_RS03615 7539d2924475f75fee5d5153857f8dd6 217 PANTHER PTHR32439 3 205 7.3E-60 T 22-04-2016 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 851 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 SUPERFAMILY SSF52540 161 548 7.82E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 Gene3D G3DSA:1.10.1780.10 1 149 3.6E-38 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 PANTHER PTHR11638 1 849 0.0 T 22-04-2016 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 Gene3D G3DSA:3.40.50.300 161 343 7.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 PANTHER PTHR11638:SF120 1 849 0.0 T 22-04-2016 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 SMART SM01086 767 858 1.2E-35 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 SMART SM00382 199 343 3.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 SMART SM00382 600 749 1.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 SUPERFAMILY SSF52540 549 848 3.58E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 63 4.0E-6 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 146 2.0E-12 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 336 1.8E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 Gene3D G3DSA:1.10.8.60 779 859 7.7E-33 T 22-04-2016 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 Gene3D G3DSA:1.10.8.60 344 427 6.7E-37 T 22-04-2016 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 847 2.6E-27 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 SUPERFAMILY SSF81923 4 142 1.37E-32 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 Gene3D G3DSA:3.40.50.300 553 778 4.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 9.7E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 9.7E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 9.7E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 9.7E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RM25_RS09035 7b6a1e4565e76d11000371087d23a323 866 Pfam PF07724 AAA domain (Cdc48 subfamily) 599 761 3.6E-57 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 ProSitePatterns PS01134 FtsZ protein signature 1. 42 76 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 SUPERFAMILY SSF55307 202 316 5.49E-44 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 PANTHER PTHR30314:SF3 5 380 6.1E-190 T 22-04-2016 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 6 325 1.2E-128 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 ProSitePatterns PS01135 FtsZ protein signature 2. 95 116 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 Gene3D G3DSA:3.30.1330.20 213 316 2.8E-49 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 Gene3D G3DSA:3.40.50.1440 12 212 1.0E-91 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 7 375 38.57 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 Pfam PF12327 FtsZ family, C-terminal domain 220 314 6.8E-35 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 PRINTS PR00423 Cell division protein FtsZ signature 96 116 3.0E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 PRINTS PR00423 Cell division protein FtsZ signature 124 145 3.0E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 PRINTS PR00423 Cell division protein FtsZ signature 187 209 3.0E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 PRINTS PR00423 Cell division protein FtsZ signature 210 231 3.0E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 PANTHER PTHR30314 5 380 6.1E-190 T 22-04-2016 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 SUPERFAMILY SSF52490 10 206 6.02E-67 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 12 171 2.2E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 SMART SM00865 205 322 1.1E-56 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RM25_RS07235 f41014ddf07eb8886bcbaec97ac4519f 413 SMART SM00864 11 203 3.3E-110 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RM25_RS02955 4d89494880d3fb6868dc64997e6da22d 408 PANTHER PTHR23513 1 405 1.0E-34 T 22-04-2016 RM25_RS02955 4d89494880d3fb6868dc64997e6da22d 408 SUPERFAMILY SSF103473 16 377 3.14E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS02955 4d89494880d3fb6868dc64997e6da22d 408 Gene3D G3DSA:1.20.1250.20 224 337 1.6E-4 T 22-04-2016 RM25_RS02955 4d89494880d3fb6868dc64997e6da22d 408 Gene3D G3DSA:1.20.1250.20 12 197 1.7E-13 T 22-04-2016 RM25_RS02955 4d89494880d3fb6868dc64997e6da22d 408 Pfam PF05977 Transmembrane secretion effector 26 327 6.7E-19 T 22-04-2016 IPR010290 Transmembrane secretion effector RM25_RS11815 3bceb68bc1abd0eceaae211d0a6da81a 303 PANTHER PTHR21180 150 303 5.3E-31 T 22-04-2016 RM25_RS11815 3bceb68bc1abd0eceaae211d0a6da81a 303 SUPERFAMILY SSF47781 234 303 1.09E-27 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RM25_RS11815 3bceb68bc1abd0eceaae211d0a6da81a 303 Gene3D G3DSA:1.10.150.320 237 302 1.1E-20 T 22-04-2016 RM25_RS11815 3bceb68bc1abd0eceaae211d0a6da81a 303 Gene3D G3DSA:3.10.560.10 147 187 1.8E-6 T 22-04-2016 RM25_RS11815 3bceb68bc1abd0eceaae211d0a6da81a 303 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 241 302 6.5E-18 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain RM25_RS11815 3bceb68bc1abd0eceaae211d0a6da81a 303 Pfam PF10531 SLBB domain 150 192 1.3E-8 T 22-04-2016 IPR019554 Soluble ligand binding domain RM25_RS11815 3bceb68bc1abd0eceaae211d0a6da81a 303 Pfam PF12836 Helix-hairpin-helix motif 241 301 3.1E-22 T 22-04-2016 RM25_RS11815 3bceb68bc1abd0eceaae211d0a6da81a 303 SMART SM00278 280 299 13.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RM25_RS11815 3bceb68bc1abd0eceaae211d0a6da81a 303 SMART SM00278 250 269 0.015 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RM25_RS07765 17f46d0d3a5816a2c80fa7c57e5bddbf 276 Pfam PF05690 Thiazole biosynthesis protein ThiG 27 269 5.5E-101 T 22-04-2016 RM25_RS07765 17f46d0d3a5816a2c80fa7c57e5bddbf 276 Gene3D G3DSA:3.20.20.70 23 273 1.3E-55 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS07765 17f46d0d3a5816a2c80fa7c57e5bddbf 276 PANTHER PTHR34266 19 276 1.6E-131 T 22-04-2016 RM25_RS07765 17f46d0d3a5816a2c80fa7c57e5bddbf 276 Hamap MF_00443 Thiazole synthase [thiG]. 24 275 40.564 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 RM25_RS07765 17f46d0d3a5816a2c80fa7c57e5bddbf 276 SUPERFAMILY SSF110399 24 261 2.88E-81 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 RM25_RS08165 6b76fbbb990821026e52dde0e61065e9 325 Gene3D G3DSA:3.30.70.890 185 302 1.8E-24 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RM25_RS08165 6b76fbbb990821026e52dde0e61065e9 325 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 20 297 4.5E-47 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS08165 6b76fbbb990821026e52dde0e61065e9 325 Pfam PF08544 GHMP kinases C terminal 229 302 2.6E-8 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RM25_RS08165 6b76fbbb990821026e52dde0e61065e9 325 SUPERFAMILY SSF55060 185 303 4.68E-22 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RM25_RS08165 6b76fbbb990821026e52dde0e61065e9 325 PIRSF PIRSF010376 19 320 2.1E-71 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS08165 6b76fbbb990821026e52dde0e61065e9 325 SUPERFAMILY SSF54211 21 178 5.01E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS08165 6b76fbbb990821026e52dde0e61065e9 325 Gene3D G3DSA:3.30.230.10 22 179 8.7E-46 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS08165 6b76fbbb990821026e52dde0e61065e9 325 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 21 325 28.936 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS08165 6b76fbbb990821026e52dde0e61065e9 325 PANTHER PTHR20861:SF2 26 304 6.7E-63 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS08165 6b76fbbb990821026e52dde0e61065e9 325 Pfam PF00288 GHMP kinases N terminal domain 108 166 3.2E-5 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 RM25_RS08165 6b76fbbb990821026e52dde0e61065e9 325 PANTHER PTHR20861 26 304 6.7E-63 T 22-04-2016 RM25_RS02855 a4bc83f22a41aaa7e663d32159eb3216 284 PANTHER PTHR23417:SF14 33 275 1.8E-53 T 22-04-2016 RM25_RS02855 a4bc83f22a41aaa7e663d32159eb3216 284 PANTHER PTHR23417 33 275 1.8E-53 T 22-04-2016 RM25_RS02855 a4bc83f22a41aaa7e663d32159eb3216 284 SUPERFAMILY SSF53335 92 273 4.53E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS02855 a4bc83f22a41aaa7e663d32159eb3216 284 Gene3D G3DSA:3.40.50.150 74 250 2.0E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS02855 a4bc83f22a41aaa7e663d32159eb3216 284 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 90 272 6.6E-40 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RM25_RS02855 a4bc83f22a41aaa7e663d32159eb3216 284 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 50 275 28.342 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RM25_RS02855 a4bc83f22a41aaa7e663d32159eb3216 284 Pfam PF02390 Putative methyltransferase 99 268 2.2E-43 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RM25_RS07980 3b519257a6a44120f5b68602ea0f8b08 220 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 2 216 32.563 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RM25_RS07980 3b519257a6a44120f5b68602ea0f8b08 220 Pfam PF03167 Uracil DNA glycosylase superfamily 49 203 4.2E-18 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RM25_RS07980 3b519257a6a44120f5b68602ea0f8b08 220 SMART SM00987 44 205 7.0E-25 T 22-04-2016 RM25_RS07980 3b519257a6a44120f5b68602ea0f8b08 220 PANTHER PTHR11264 5 217 2.6E-111 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RM25_RS07980 3b519257a6a44120f5b68602ea0f8b08 220 SMART SM00986 44 205 7.0E-25 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RM25_RS07980 3b519257a6a44120f5b68602ea0f8b08 220 PANTHER PTHR11264:SF5 5 217 2.6E-111 T 22-04-2016 RM25_RS07980 3b519257a6a44120f5b68602ea0f8b08 220 Gene3D G3DSA:3.40.470.10 2 217 5.1E-80 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RM25_RS07980 3b519257a6a44120f5b68602ea0f8b08 220 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 52 61 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 RM25_RS07980 3b519257a6a44120f5b68602ea0f8b08 220 SUPERFAMILY SSF52141 2 216 1.18E-72 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RM25_RS09690 89b63c353d48e43ffb8e52bf415f62da 214 Pfam PF13247 4Fe-4S dicluster domain 68 162 7.5E-24 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RM25_RS09690 89b63c353d48e43ffb8e52bf415f62da 214 SUPERFAMILY SSF54862 10 208 9.42E-65 T 22-04-2016 RM25_RS09690 89b63c353d48e43ffb8e52bf415f62da 214 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 12 172 2.0E-76 T 22-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B RM25_RS09690 89b63c353d48e43ffb8e52bf415f62da 214 Gene3D G3DSA:3.30.70.20 128 169 9.8E-15 T 22-04-2016 RM25_RS09690 89b63c353d48e43ffb8e52bf415f62da 214 PANTHER PTHR11938 63 165 7.6E-59 T 22-04-2016 RM25_RS09690 89b63c353d48e43ffb8e52bf415f62da 214 PANTHER PTHR11938 12 47 7.6E-59 T 22-04-2016 RM25_RS09690 89b63c353d48e43ffb8e52bf415f62da 214 Gene3D G3DSA:3.30.70.20 11 83 9.2E-19 T 22-04-2016 RM25_RS09690 89b63c353d48e43ffb8e52bf415f62da 214 PANTHER PTHR11938:SF85 63 165 7.6E-59 T 22-04-2016 RM25_RS09690 89b63c353d48e43ffb8e52bf415f62da 214 PANTHER PTHR11938:SF85 12 47 7.6E-59 T 22-04-2016 RM25_RS09690 89b63c353d48e43ffb8e52bf415f62da 214 Gene3D G3DSA:3.30.70.20 84 127 2.4E-23 T 22-04-2016 RM25_RS04145 5ce149a4760ba9b5bd5de91cf3a0b3e4 152 Gene3D G3DSA:3.40.390.30 5 148 5.4E-38 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 RM25_RS04145 5ce149a4760ba9b5bd5de91cf3a0b3e4 152 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 115 125 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site RM25_RS04145 5ce149a4760ba9b5bd5de91cf3a0b3e4 152 Pfam PF02130 Uncharacterized protein family UPF0054 11 143 3.7E-34 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RM25_RS04145 5ce149a4760ba9b5bd5de91cf3a0b3e4 152 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 149 19.651 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RM25_RS04145 5ce149a4760ba9b5bd5de91cf3a0b3e4 152 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 35 145 7.4E-29 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RM25_RS04145 5ce149a4760ba9b5bd5de91cf3a0b3e4 152 PANTHER PTHR22881 10 150 1.2E-30 T 22-04-2016 RM25_RS04145 5ce149a4760ba9b5bd5de91cf3a0b3e4 152 SUPERFAMILY SSF55486 7 145 1.09E-32 T 22-04-2016 RM25_RS09080 ea478aaad89faedac9f0ceb87f4f8507 158 SUPERFAMILY SSF46767 69 150 3.92E-28 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RM25_RS09080 ea478aaad89faedac9f0ceb87f4f8507 158 SUPERFAMILY SSF53155 9 75 5.49E-12 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RM25_RS09080 ea478aaad89faedac9f0ceb87f4f8507 158 PANTHER PTHR10815 40 149 2.7E-46 T 22-04-2016 RM25_RS09080 ea478aaad89faedac9f0ceb87f4f8507 158 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 70 149 1.6E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RM25_RS09080 ea478aaad89faedac9f0ceb87f4f8507 158 Gene3D G3DSA:1.10.10.10 69 151 6.2E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS09080 ea478aaad89faedac9f0ceb87f4f8507 158 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 71 150 3.5E-31 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RM25_RS09080 ea478aaad89faedac9f0ceb87f4f8507 158 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 120 126 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 RM25_RS09080 ea478aaad89faedac9f0ceb87f4f8507 158 PANTHER PTHR10815:SF5 40 149 2.7E-46 T 22-04-2016 RM25_RS06140 54dcf0a6d04ef42e27b4fa0d53185aff 361 PANTHER PTHR11373 11 226 7.2E-48 T 22-04-2016 RM25_RS06140 54dcf0a6d04ef42e27b4fa0d53185aff 361 Pfam PF13286 Phosphohydrolase-associated domain 260 341 8.0E-12 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain RM25_RS06140 54dcf0a6d04ef42e27b4fa0d53185aff 361 Pfam PF01966 HD domain 102 206 7.5E-14 T 22-04-2016 IPR006674 HD domain RM25_RS06140 54dcf0a6d04ef42e27b4fa0d53185aff 361 SUPERFAMILY SSF109604 63 343 1.95E-57 T 22-04-2016 RM25_RS06140 54dcf0a6d04ef42e27b4fa0d53185aff 361 Gene3D G3DSA:1.10.3210.10 66 345 1.2E-54 T 22-04-2016 IPR006674 HD domain RM25_RS06140 54dcf0a6d04ef42e27b4fa0d53185aff 361 SMART SM00471 98 217 2.5E-10 T 22-04-2016 IPR003607 HD/PDEase domain RM25_RS06140 54dcf0a6d04ef42e27b4fa0d53185aff 361 PANTHER PTHR11373:SF25 11 226 7.2E-48 T 22-04-2016 RM25_RS08710 1bbd5663c57f4b366495305221881270 365 Gene3D G3DSA:2.40.50.140 282 348 3.8E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS08710 1bbd5663c57f4b366495305221881270 365 SUPERFAMILY SSF50331 238 364 5.59E-27 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RM25_RS08710 1bbd5663c57f4b366495305221881270 365 Pfam PF00005 ABC transporter 22 163 3.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS08710 1bbd5663c57f4b366495305221881270 365 SMART SM00382 30 214 1.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS08710 1bbd5663c57f4b366495305221881270 365 PANTHER PTHR24220:SF151 5 302 1.1E-164 T 22-04-2016 RM25_RS08710 1bbd5663c57f4b366495305221881270 365 SUPERFAMILY SSF52540 5 244 7.83E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08710 1bbd5663c57f4b366495305221881270 365 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS08710 1bbd5663c57f4b366495305221881270 365 PANTHER PTHR24220 5 302 1.1E-164 T 22-04-2016 RM25_RS08710 1bbd5663c57f4b366495305221881270 365 Gene3D G3DSA:3.40.50.300 4 236 1.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08710 1bbd5663c57f4b366495305221881270 365 Gene3D G3DSA:2.40.50.100 350 364 1.6E-11 T 22-04-2016 RM25_RS08710 1bbd5663c57f4b366495305221881270 365 Gene3D G3DSA:2.40.50.100 241 281 1.6E-11 T 22-04-2016 RM25_RS00380 225f557bbfe1f513571781d8a5c18c5e 264 PANTHER PTHR10434 21 217 1.3E-34 T 22-04-2016 RM25_RS00380 225f557bbfe1f513571781d8a5c18c5e 264 Pfam PF01553 Acyltransferase 36 166 6.3E-21 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RM25_RS00380 225f557bbfe1f513571781d8a5c18c5e 264 SMART SM00563 52 169 1.3E-21 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RM25_RS00380 225f557bbfe1f513571781d8a5c18c5e 264 SUPERFAMILY SSF69593 25 221 6.8E-31 T 22-04-2016 RM25_RS00380 225f557bbfe1f513571781d8a5c18c5e 264 Gene3D G3DSA:3.40.1130.10 22 218 1.7E-15 T 22-04-2016 RM25_RS02385 80c81b9ff1d876e232d5ff1d3d2364a1 99 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 99 19.205 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RM25_RS02385 80c81b9ff1d876e232d5ff1d3d2364a1 99 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 93 6.0E-22 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RM25_RS02385 80c81b9ff1d876e232d5ff1d3d2364a1 99 PANTHER PTHR11434 2 98 6.5E-33 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 SUPERFAMILY SSF53335 835 1170 2.95E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 SMART SM00487 170 402 5.1E-12 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 Pfam PF04851 Type III restriction enzyme, res subunit 172 370 5.3E-24 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 SUPERFAMILY SSF52540 299 369 3.8E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 SUPERFAMILY SSF52540 156 271 3.8E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 Gene3D G3DSA:3.40.50.300 181 261 5.3E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 Gene3D G3DSA:3.40.50.300 306 371 5.3E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 PANTHER PTHR11274 1 426 6.7E-99 T 22-04-2016 RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 PANTHER PTHR11274 497 795 6.7E-99 T 22-04-2016 RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 Gene3D G3DSA:3.40.1350.10 23 133 2.3E-4 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 Pfam PF13156 Restriction endonuclease 37 155 9.3E-44 T 22-04-2016 RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 Gene3D G3DSA:3.40.50.300 509 593 9.9E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 Gene3D G3DSA:3.40.50.300 281 305 9.9E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 1007 1013 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 894 908 2.1E-6 T 22-04-2016 RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 859 875 2.1E-6 T 22-04-2016 RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1004 1016 2.1E-6 T 22-04-2016 RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 SUPERFAMILY SSF52540 322 369 2.05E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 SUPERFAMILY SSF52540 458 594 2.05E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 SUPERFAMILY SSF52980 23 156 1.5E-8 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 Pfam PF00271 Helicase conserved C-terminal domain 507 584 4.8E-6 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 PANTHER PTHR11274:SF4 1 426 6.7E-99 T 22-04-2016 RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 PANTHER PTHR11274:SF4 497 795 6.7E-99 T 22-04-2016 RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 SMART SM00490 500 585 0.0057 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS01555 d3729ed13ea256942342b080c2fc757d 1233 Gene3D G3DSA:3.40.50.150 861 1157 4.6E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS05815 33a523a14e090b249c66ea3210b3d0b2 347 SMART SM00228 101 197 0.0075 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RM25_RS05815 33a523a14e090b249c66ea3210b3d0b2 347 Gene3D G3DSA:3.30.230.10 204 331 3.8E-17 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS05815 33a523a14e090b249c66ea3210b3d0b2 347 SUPERFAMILY SSF50156 139 205 4.26E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RM25_RS05815 33a523a14e090b249c66ea3210b3d0b2 347 PANTHER PTHR10046:SF48 93 339 2.5E-18 T 22-04-2016 RM25_RS05815 33a523a14e090b249c66ea3210b3d0b2 347 SUPERFAMILY SSF54211 186 332 2.28E-15 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS05815 33a523a14e090b249c66ea3210b3d0b2 347 Gene3D G3DSA:2.30.42.10 139 203 2.7E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RM25_RS05815 33a523a14e090b249c66ea3210b3d0b2 347 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 241 331 4.9E-6 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 RM25_RS05815 33a523a14e090b249c66ea3210b3d0b2 347 Pfam PF13180 PDZ domain 138 205 3.0E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RM25_RS05815 33a523a14e090b249c66ea3210b3d0b2 347 PANTHER PTHR10046 93 339 2.5E-18 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 RM25_RS02940 c87a1deec530a30727e66c2e841a5f83 609 Gene3D G3DSA:1.10.1610.10 278 341 2.7E-11 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RM25_RS02940 c87a1deec530a30727e66c2e841a5f83 609 SUPERFAMILY SSF55469 41 242 5.23E-45 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RM25_RS02940 c87a1deec530a30727e66c2e841a5f83 609 Gene3D G3DSA:3.40.50.10210 342 594 1.2E-67 T 22-04-2016 RM25_RS02940 c87a1deec530a30727e66c2e841a5f83 609 Pfam PF00881 Nitroreductase family 44 210 1.1E-27 T 22-04-2016 IPR029479 Nitroreductase RM25_RS02940 c87a1deec530a30727e66c2e841a5f83 609 PANTHER PTHR21712:SF4 281 609 2.8E-46 T 22-04-2016 RM25_RS02940 c87a1deec530a30727e66c2e841a5f83 609 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 32 235 1.6E-63 T 22-04-2016 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5508|MetaCyc: PWY-5523 RM25_RS02940 c87a1deec530a30727e66c2e841a5f83 609 Pfam PF02277 Phosphoribosyltransferase 283 604 5.8E-70 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RM25_RS02940 c87a1deec530a30727e66c2e841a5f83 609 Gene3D G3DSA:3.40.109.10 34 242 3.2E-45 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RM25_RS02940 c87a1deec530a30727e66c2e841a5f83 609 SUPERFAMILY SSF52733 278 600 2.49E-64 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RM25_RS02940 c87a1deec530a30727e66c2e841a5f83 609 PANTHER PTHR21712 281 609 2.8E-46 T 22-04-2016 RM25_RS01100 1030913d14aeb9cfa9bc9744d78fa40d 292 Pfam PF01575 MaoC like domain 165 267 4.0E-19 T 22-04-2016 IPR002539 MaoC-like domain RM25_RS01100 1030913d14aeb9cfa9bc9744d78fa40d 292 Gene3D G3DSA:3.10.129.10 7 147 2.5E-28 T 22-04-2016 IPR029069 HotDog domain RM25_RS01100 1030913d14aeb9cfa9bc9744d78fa40d 292 Pfam PF13452 N-terminal half of MaoC dehydratase 10 140 1.3E-4 T 22-04-2016 RM25_RS01100 1030913d14aeb9cfa9bc9744d78fa40d 292 PANTHER PTHR13078 7 269 9.8E-50 T 22-04-2016 RM25_RS01100 1030913d14aeb9cfa9bc9744d78fa40d 292 Gene3D G3DSA:3.10.129.10 148 269 6.3E-27 T 22-04-2016 IPR029069 HotDog domain RM25_RS01100 1030913d14aeb9cfa9bc9744d78fa40d 292 SUPERFAMILY SSF54637 165 274 1.06E-22 T 22-04-2016 IPR029069 HotDog domain RM25_RS01100 1030913d14aeb9cfa9bc9744d78fa40d 292 SUPERFAMILY SSF54637 8 162 2.19E-26 T 22-04-2016 IPR029069 HotDog domain RM25_RS05965 cfb4dbc6fb80f03f3eb75198cde4832e 215 Pfam PF09685 Domain of unknown function (DUF4870) 113 200 2.2E-8 T 22-04-2016 IPR019109 Protein of unknown function DUF4870 RM25_RS05965 cfb4dbc6fb80f03f3eb75198cde4832e 215 Pfam PF08044 Domain of unknown function (DUF1707) 30 76 2.7E-13 T 22-04-2016 IPR012551 Protein of unknown function DUF1707 RM25_RS03705 2a6418b09d62cd3006f6f4bc6f4a8741 469 Pfam PF13367 Protease prsW family 100 282 6.2E-32 T 22-04-2016 IPR026898 Protease PrsW GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RM25_RS09450 ef5f9a6bb41bc82f7e2839403866872a 344 PIRSF PIRSF000148 1 343 3.2E-110 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RM25_RS09450 ef5f9a6bb41bc82f7e2839403866872a 344 Gene3D G3DSA:3.30.360.10 140 323 1.3E-65 T 22-04-2016 RM25_RS09450 ef5f9a6bb41bc82f7e2839403866872a 344 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 341 33.403 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RM25_RS09450 ef5f9a6bb41bc82f7e2839403866872a 344 SUPERFAMILY SSF51735 1 153 5.73E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS09450 ef5f9a6bb41bc82f7e2839403866872a 344 Gene3D G3DSA:3.40.50.720 1 139 3.3E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS09450 ef5f9a6bb41bc82f7e2839403866872a 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 136 327 3.6E-44 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS09450 ef5f9a6bb41bc82f7e2839403866872a 344 SUPERFAMILY SSF55347 126 328 3.16E-55 T 22-04-2016 RM25_RS09450 ef5f9a6bb41bc82f7e2839403866872a 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 116 2.7E-30 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RM25_RS09450 ef5f9a6bb41bc82f7e2839403866872a 344 PANTHER PTHR10174 52 339 3.0E-57 T 22-04-2016 RM25_RS09450 ef5f9a6bb41bc82f7e2839403866872a 344 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 2 342 1.1E-124 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RM25_RS09450 ef5f9a6bb41bc82f7e2839403866872a 344 SMART SM00859 2 117 1.6E-36 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RM25_RS00395 976f46c96c2a4f577f7ea6909eaa5ffb 510 Gene3D G3DSA:3.40.50.300 61 145 2.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00395 976f46c96c2a4f577f7ea6909eaa5ffb 510 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 198 499 3.7E-115 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RM25_RS00395 976f46c96c2a4f577f7ea6909eaa5ffb 510 Pfam PF01515 Phosphate acetyl/butaryl transferase 183 499 4.8E-120 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RM25_RS00395 976f46c96c2a4f577f7ea6909eaa5ffb 510 PANTHER PTHR23406 407 503 3.0E-48 T 22-04-2016 RM25_RS00395 976f46c96c2a4f577f7ea6909eaa5ffb 510 PANTHER PTHR23406:SF3 407 503 3.0E-48 T 22-04-2016 RM25_RS00395 976f46c96c2a4f577f7ea6909eaa5ffb 510 SUPERFAMILY SSF53659 184 502 3.54E-92 T 22-04-2016 RM25_RS00395 976f46c96c2a4f577f7ea6909eaa5ffb 510 Gene3D G3DSA:3.40.50.10750 316 475 6.3E-63 T 22-04-2016 RM25_RS09545 eab6c7e7b9f643baf6de24c69c000397 114 SUPERFAMILY SSF46785 4 90 9.87E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS09545 eab6c7e7b9f643baf6de24c69c000397 114 SMART SM00345 15 74 8.4E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS09545 eab6c7e7b9f643baf6de24c69c000397 114 Gene3D G3DSA:1.10.10.10 2 75 3.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS09545 eab6c7e7b9f643baf6de24c69c000397 114 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 5.1E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS10105 2001e687c3440527fadab72d732874ab 168 PANTHER PTHR10192 4 167 6.3E-24 T 22-04-2016 RM25_RS10105 2001e687c3440527fadab72d732874ab 168 SUPERFAMILY SSF53218 11 166 4.32E-30 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS10105 2001e687c3440527fadab72d732874ab 168 PANTHER PTHR10192:SF5 4 167 6.3E-24 T 22-04-2016 RM25_RS10105 2001e687c3440527fadab72d732874ab 168 Gene3D G3DSA:3.40.980.10 11 166 1.7E-35 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS10105 2001e687c3440527fadab72d732874ab 168 SMART SM00852 14 161 3.1E-10 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS10105 2001e687c3440527fadab72d732874ab 168 Pfam PF00994 Probable molybdopterin binding domain 14 159 6.7E-22 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 SMART SM01130 5 292 3.8E-99 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 43 60 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 PANTHER PTHR12128 1 293 2.2E-96 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 Pfam PF00701 Dihydrodipicolinate synthetase family 6 290 7.3E-74 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 PANTHER PTHR12128:SF34 1 293 2.2E-96 T 22-04-2016 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 PIRSF PIRSF001365 1 293 1.7E-68 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.6E-25 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 1.6E-25 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 1.6E-25 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 1.6E-25 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 SUPERFAMILY SSF51569 4 291 1.88E-81 T 22-04-2016 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 168 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 Gene3D G3DSA:3.20.20.70 4 293 4.7E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 290 50.233 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS07565 9c9b97fdc3ae1cbf0219712378b7b3ec 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 289 9.9E-72 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS03980 8a1d1c64f5dd7ac6653d84285b1d4ede 413 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 402 2.5E-137 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RM25_RS03980 8a1d1c64f5dd7ac6653d84285b1d4ede 413 PANTHER PTHR11063:SF8 1 412 1.6E-168 T 22-04-2016 RM25_RS03980 8a1d1c64f5dd7ac6653d84285b1d4ede 413 PIRSF PIRSF000151 1 413 2.6E-167 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RM25_RS03980 8a1d1c64f5dd7ac6653d84285b1d4ede 413 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 412 40.004 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RM25_RS03980 8a1d1c64f5dd7ac6653d84285b1d4ede 413 Gene3D G3DSA:3.40.309.10 223 369 2.1E-38 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RM25_RS03980 8a1d1c64f5dd7ac6653d84285b1d4ede 413 Pfam PF00171 Aldehyde dehydrogenase family 3 282 2.2E-16 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RM25_RS03980 8a1d1c64f5dd7ac6653d84285b1d4ede 413 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 319 341 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RM25_RS03980 8a1d1c64f5dd7ac6653d84285b1d4ede 413 SUPERFAMILY SSF53720 3 412 1.83E-113 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RM25_RS03980 8a1d1c64f5dd7ac6653d84285b1d4ede 413 PANTHER PTHR11063 1 412 1.6E-168 T 22-04-2016 RM25_RS03980 8a1d1c64f5dd7ac6653d84285b1d4ede 413 Gene3D G3DSA:3.40.605.10 2 220 6.1E-102 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RM25_RS03980 8a1d1c64f5dd7ac6653d84285b1d4ede 413 Gene3D G3DSA:3.40.605.10 370 412 6.1E-102 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 Gene3D G3DSA:2.40.50.100 1 95 5.5E-29 T 22-04-2016 RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 Gene3D G3DSA:2.40.50.100 135 228 3.2E-28 T 22-04-2016 RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 Pfam PF00364 Biotin-requiring enzyme 136 206 3.0E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 Pfam PF00364 Biotin-requiring enzyme 4 75 1.9E-20 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 SUPERFAMILY SSF52777 339 578 6.67E-79 T 22-04-2016 RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 Gene3D G3DSA:4.10.320.10 288 333 1.1E-17 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 159 188 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 Pfam PF02817 e3 binding domain 289 322 1.5E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 350 578 1.5E-75 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 SUPERFAMILY SSF51230 136 227 1.7E-25 T 22-04-2016 IPR011053 Single hybrid motif RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 TIGRFAM TIGR02927 SucB_Actino: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 1 587 2.4E-228 T 22-04-2016 IPR014276 2-oxoglutarate dehydrogenase, E2 component KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 SUPERFAMILY SSF47005 288 325 1.83E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 SUPERFAMILY SSF51230 1 96 3.01E-27 T 22-04-2016 IPR011053 Single hybrid motif RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 Gene3D G3DSA:3.30.559.10 339 578 1.2E-81 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 PANTHER PTHR23151:SF8 284 578 8.6E-195 T 22-04-2016 RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 PANTHER PTHR23151:SF8 23 266 8.6E-195 T 22-04-2016 RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 PANTHER PTHR23151 284 578 8.6E-195 T 22-04-2016 RM25_RS07455 37c56d7b712afa0a82cfbcb36d4cb9a8 589 PANTHER PTHR23151 23 266 8.6E-195 T 22-04-2016 RM25_RS00265 b6e710d6679ad447f76f10f601779698 289 Gene3D G3DSA:3.90.550.10 1 262 4.4E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS00265 b6e710d6679ad447f76f10f601779698 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 285 2.0E-138 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RM25_RS00265 b6e710d6679ad447f76f10f601779698 289 Pfam PF00483 Nucleotidyl transferase 2 236 7.6E-62 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RM25_RS00265 b6e710d6679ad447f76f10f601779698 289 SUPERFAMILY SSF53448 1 284 2.05E-81 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS00265 b6e710d6679ad447f76f10f601779698 289 PANTHER PTHR22572:SF105 2 268 5.2E-140 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RM25_RS00265 b6e710d6679ad447f76f10f601779698 289 PANTHER PTHR22572 2 268 5.2E-140 T 22-04-2016 RM25_RS01255 b17d0d05eec428ca216c8c22551c5812 317 PANTHER PTHR10584:SF166 1 299 4.4E-36 T 22-04-2016 RM25_RS01255 b17d0d05eec428ca216c8c22551c5812 317 Gene3D G3DSA:3.40.1190.20 2 294 2.8E-53 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS01255 b17d0d05eec428ca216c8c22551c5812 317 Pfam PF00294 pfkB family carbohydrate kinase 2 291 1.2E-32 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RM25_RS01255 b17d0d05eec428ca216c8c22551c5812 317 PANTHER PTHR10584 1 299 4.4E-36 T 22-04-2016 RM25_RS01255 b17d0d05eec428ca216c8c22551c5812 317 SUPERFAMILY SSF53613 2 290 2.34E-50 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS06975 aeec974e1404489c9ebccd636e337f59 418 Gene3D G3DSA:3.90.1150.10 287 402 1.9E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS06975 aeec974e1404489c9ebccd636e337f59 418 SUPERFAMILY SSF53383 5 403 1.38E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS06975 aeec974e1404489c9ebccd636e337f59 418 PANTHER PTHR11601:SF17 8 410 4.1E-173 T 22-04-2016 RM25_RS06975 aeec974e1404489c9ebccd636e337f59 418 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 9 410 6.1E-170 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RM25_RS06975 aeec974e1404489c9ebccd636e337f59 418 Gene3D G3DSA:3.40.640.10 38 286 9.8E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS06975 aeec974e1404489c9ebccd636e337f59 418 PANTHER PTHR11601 8 410 4.1E-173 T 22-04-2016 RM25_RS06975 aeec974e1404489c9ebccd636e337f59 418 Pfam PF00266 Aminotransferase class-V 27 399 1.1E-141 T 22-04-2016 IPR000192 Aminotransferase class V domain RM25_RS03410 6830b3f2075a6b68eb46956ab1c7a86d 158 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 1 148 6.9E-63 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RM25_RS03410 6830b3f2075a6b68eb46956ab1c7a86d 158 Pfam PF00731 AIR carboxylase 1 141 5.4E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RM25_RS03410 6830b3f2075a6b68eb46956ab1c7a86d 158 PIRSF PIRSF001338 1 155 1.4E-65 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 RM25_RS03410 6830b3f2075a6b68eb46956ab1c7a86d 158 SMART SM01001 1 144 1.2E-87 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RM25_RS03410 6830b3f2075a6b68eb46956ab1c7a86d 158 Gene3D G3DSA:3.40.50.7700 1 151 1.5E-70 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RM25_RS03410 6830b3f2075a6b68eb46956ab1c7a86d 158 PANTHER PTHR11609:SF5 1 158 2.6E-85 T 22-04-2016 RM25_RS03410 6830b3f2075a6b68eb46956ab1c7a86d 158 SUPERFAMILY SSF52255 1 153 1.31E-62 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RM25_RS03410 6830b3f2075a6b68eb46956ab1c7a86d 158 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 1 148 29.681 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RM25_RS03410 6830b3f2075a6b68eb46956ab1c7a86d 158 PANTHER PTHR11609 1 158 2.6E-85 T 22-04-2016 RM25_RS10395 2dfa7a0cda82b6b511d8c74ad8ab623b 229 SUPERFAMILY SSF52317 41 226 3.06E-39 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS10395 2dfa7a0cda82b6b511d8c74ad8ab623b 229 Gene3D G3DSA:3.40.50.880 4 225 8.8E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS10395 2dfa7a0cda82b6b511d8c74ad8ab623b 229 PANTHER PTHR11922:SF11 21 208 6.0E-39 T 22-04-2016 RM25_RS10395 2dfa7a0cda82b6b511d8c74ad8ab623b 229 Pfam PF00117 Glutamine amidotransferase class-I 21 179 1.0E-16 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RM25_RS10395 2dfa7a0cda82b6b511d8c74ad8ab623b 229 PANTHER PTHR11922 21 208 6.0E-39 T 22-04-2016 RM25_RS08245 310679c2ce542bc96b4812e38da2a7a3 414 SUPERFAMILY SSF103473 2 121 4.62E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS08245 310679c2ce542bc96b4812e38da2a7a3 414 SUPERFAMILY SSF103473 174 392 4.62E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS08245 310679c2ce542bc96b4812e38da2a7a3 414 PANTHER PTHR23501 1 389 1.2E-119 T 22-04-2016 RM25_RS08245 310679c2ce542bc96b4812e38da2a7a3 414 Pfam PF07690 Major Facilitator Superfamily 2 338 3.3E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS08245 310679c2ce542bc96b4812e38da2a7a3 414 PANTHER PTHR23501:SF15 1 389 1.2E-119 T 22-04-2016 RM25_RS08245 310679c2ce542bc96b4812e38da2a7a3 414 Gene3D G3DSA:1.20.1250.20 197 393 6.8E-22 T 22-04-2016 RM25_RS08245 310679c2ce542bc96b4812e38da2a7a3 414 Gene3D G3DSA:1.20.1250.20 2 117 1.8E-16 T 22-04-2016 RM25_RS10240 0286968ae5751fc89f38a87f593dfd70 359 SUPERFAMILY SSF52283 67 167 1.81E-23 T 22-04-2016 RM25_RS10240 0286968ae5751fc89f38a87f593dfd70 359 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 231 253 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RM25_RS10240 0286968ae5751fc89f38a87f593dfd70 359 PANTHER PTHR10996 58 353 6.5E-81 T 22-04-2016 RM25_RS10240 0286968ae5751fc89f38a87f593dfd70 359 Gene3D G3DSA:3.40.50.720 153 322 4.4E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10240 0286968ae5751fc89f38a87f593dfd70 359 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 260 276 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RM25_RS10240 0286968ae5751fc89f38a87f593dfd70 359 SUPERFAMILY SSF51735 138 320 3.85E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10240 0286968ae5751fc89f38a87f593dfd70 359 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 144 320 2.7E-50 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RM25_RS10240 0286968ae5751fc89f38a87f593dfd70 359 Gene3D G3DSA:3.40.50.720 63 152 5.6E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10240 0286968ae5751fc89f38a87f593dfd70 359 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 67 353 1.1E-17 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RM25_RS05515 a1cd7a7176996a37068e74ec31bfe6a8 148 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 9 144 3.8E-52 T 22-04-2016 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384 RM25_RS05515 a1cd7a7176996a37068e74ec31bfe6a8 148 SUPERFAMILY SSF54593 7 147 6.31E-32 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RM25_RS05515 a1cd7a7176996a37068e74ec31bfe6a8 148 PANTHER PTHR21366:SF0 10 148 7.4E-29 T 22-04-2016 RM25_RS05515 a1cd7a7176996a37068e74ec31bfe6a8 148 Gene3D G3DSA:3.10.180.10 7 146 1.9E-37 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RM25_RS05515 a1cd7a7176996a37068e74ec31bfe6a8 148 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 129 8.8E-20 T 22-04-2016 RM25_RS05515 a1cd7a7176996a37068e74ec31bfe6a8 148 PANTHER PTHR21366 10 148 7.4E-29 T 22-04-2016 RM25_RS06650 866c4bb76e582654e15028651c52c87e 118 SUPERFAMILY SSF50104 2 116 9.93E-47 T 22-04-2016 IPR008991 Translation protein SH3-like domain RM25_RS06650 866c4bb76e582654e15028651c52c87e 118 PANTHER PTHR15680 1 116 6.6E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06650 866c4bb76e582654e15028651c52c87e 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06650 866c4bb76e582654e15028651c52c87e 118 Pfam PF01245 Ribosomal protein L19 5 114 2.4E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06650 866c4bb76e582654e15028651c52c87e 118 PIRSF PIRSF002191 1 118 3.0E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06650 866c4bb76e582654e15028651c52c87e 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 115 30.711 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06650 866c4bb76e582654e15028651c52c87e 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 114 5.4E-48 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06650 866c4bb76e582654e15028651c52c87e 118 PRINTS PR00061 Ribosomal protein L19 signature 35 64 5.4E-42 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06650 866c4bb76e582654e15028651c52c87e 118 PRINTS PR00061 Ribosomal protein L19 signature 5 34 5.4E-42 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06650 866c4bb76e582654e15028651c52c87e 118 PRINTS PR00061 Ribosomal protein L19 signature 89 114 5.4E-42 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS10445 70e8e0337a114d66a86b8edd3d7160b0 298 PANTHER PTHR11122 39 297 2.4E-66 T 22-04-2016 RM25_RS10445 70e8e0337a114d66a86b8edd3d7160b0 298 PIRSF PIRSF016020 8 298 3.8E-54 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 RM25_RS10445 70e8e0337a114d66a86b8edd3d7160b0 298 Pfam PF01263 Aldose 1-epimerase 39 295 1.1E-36 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RM25_RS10445 70e8e0337a114d66a86b8edd3d7160b0 298 SUPERFAMILY SSF74650 25 295 1.19E-56 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RM25_RS10445 70e8e0337a114d66a86b8edd3d7160b0 298 Gene3D G3DSA:2.70.98.10 24 296 1.5E-72 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RM25_RS02205 60bd2826c1adbf6f30b129e2d3482572 307 Pfam PF00005 ABC transporter 27 168 2.8E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS02205 60bd2826c1adbf6f30b129e2d3482572 307 PANTHER PTHR24220 6 229 2.9E-59 T 22-04-2016 RM25_RS02205 60bd2826c1adbf6f30b129e2d3482572 307 SMART SM00382 33 216 7.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS02205 60bd2826c1adbf6f30b129e2d3482572 307 SUPERFAMILY SSF52540 3 229 1.65E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02205 60bd2826c1adbf6f30b129e2d3482572 307 Gene3D G3DSA:3.40.50.300 2 240 2.4E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05490 6e71a30faa470a86984b973b2baa62c4 445 Gene3D G3DSA:3.90.1200.10 232 327 1.3E-5 T 22-04-2016 RM25_RS05490 6e71a30faa470a86984b973b2baa62c4 445 SUPERFAMILY SSF56112 216 428 4.59E-15 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS02525 caabd56e5c9e34a96f740a37df96ca7a 236 SUPERFAMILY SSF56808 5 224 1.27E-78 T 22-04-2016 IPR023674 Ribosomal protein L1-like RM25_RS02525 caabd56e5c9e34a96f740a37df96ca7a 236 Gene3D G3DSA:3.40.50.790 68 158 1.3E-40 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RM25_RS02525 caabd56e5c9e34a96f740a37df96ca7a 236 PIRSF PIRSF002155 1 226 1.4E-70 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 RM25_RS02525 caabd56e5c9e34a96f740a37df96ca7a 236 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 225 1.3E-96 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RM25_RS02525 caabd56e5c9e34a96f740a37df96ca7a 236 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 6.7E-52 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RM25_RS02525 caabd56e5c9e34a96f740a37df96ca7a 236 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 228 41.523 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RM25_RS02525 caabd56e5c9e34a96f740a37df96ca7a 236 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 138 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site RM25_RS02525 caabd56e5c9e34a96f740a37df96ca7a 236 Gene3D G3DSA:3.30.190.20 17 67 3.3E-43 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RM25_RS02525 caabd56e5c9e34a96f740a37df96ca7a 236 Gene3D G3DSA:3.30.190.20 160 225 3.3E-43 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RM25_RS02525 caabd56e5c9e34a96f740a37df96ca7a 236 PANTHER PTHR23105 16 235 1.6E-82 T 22-04-2016 RM25_RS02525 caabd56e5c9e34a96f740a37df96ca7a 236 PANTHER PTHR23105:SF5 16 235 1.6E-82 T 22-04-2016 RM25_RS03100 352ca7b226468990739a92dcb8a53386 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 427 2.0E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS03100 352ca7b226468990739a92dcb8a53386 430 Gene3D G3DSA:3.30.565.10 306 428 1.6E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS03100 352ca7b226468990739a92dcb8a53386 430 Pfam PF04024 PspC domain 30 83 3.0E-13 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal RM25_RS03100 352ca7b226468990739a92dcb8a53386 430 PANTHER PTHR24421 24 104 1.2E-17 T 22-04-2016 RM25_RS03100 352ca7b226468990739a92dcb8a53386 430 PANTHER PTHR24421 248 428 1.2E-17 T 22-04-2016 RM25_RS03100 352ca7b226468990739a92dcb8a53386 430 SUPERFAMILY SSF55874 322 428 1.7E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PANTHER PTHR10169 16 680 1.3E-262 T 22-04-2016 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 ProSitePatterns PS00177 DNA topoisomerase II signature. 462 470 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR01159 DNA gyrase subunit B signature 413 433 1.3E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR01159 DNA gyrase subunit B signature 351 367 1.3E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR01159 DNA gyrase subunit B signature 37 47 1.3E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR01159 DNA gyrase subunit B signature 211 226 1.3E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR01159 DNA gyrase subunit B signature 649 665 1.3E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR01159 DNA gyrase subunit B signature 226 239 1.3E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR01159 DNA gyrase subunit B signature 281 299 1.3E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR01159 DNA gyrase subunit B signature 633 645 1.3E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR01159 DNA gyrase subunit B signature 258 280 1.3E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR01159 DNA gyrase subunit B signature 510 519 1.3E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR01159 DNA gyrase subunit B signature 399 413 1.3E-64 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 Pfam PF01751 Toprim domain 459 568 1.2E-15 T 22-04-2016 IPR006171 Toprim domain RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 SUPERFAMILY SSF54211 259 430 3.98E-53 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 Gene3D G3DSA:3.40.50.670 444 662 5.8E-86 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 Pfam PF00204 DNA gyrase B 259 429 2.2E-58 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 34 680 82.701 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 612 669 9.7E-27 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 SMART SM00387 62 206 8.2E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 SUPERFAMILY SSF56719 434 675 1.36E-79 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 Gene3D G3DSA:3.30.230.10 258 430 4.1E-64 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 64 204 1.6E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 SUPERFAMILY SSF55874 37 243 1.66E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 37 680 4.1E-267 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR00418 DNA topoisomerase II family signature 307 320 1.1E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR00418 DNA topoisomerase II family signature 564 576 1.1E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR00418 DNA topoisomerase II family signature 144 158 1.1E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR00418 DNA topoisomerase II family signature 460 474 1.1E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR00418 DNA topoisomerase II family signature 66 81 1.1E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR00418 DNA topoisomerase II family signature 544 561 1.1E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR00418 DNA topoisomerase II family signature 526 542 1.1E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR00418 DNA topoisomerase II family signature 612 628 1.1E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 PRINTS PR00418 DNA topoisomerase II family signature 101 114 1.1E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 SMART SM00433 66 673 0.0 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00070 c775871d5630e4d8e7e33d8d90cf1a46 680 Gene3D G3DSA:3.30.565.10 37 242 1.3E-83 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS11015 52ace1451e0651ebffb07405e1eae119 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 207 4.3E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11015 52ace1451e0651ebffb07405e1eae119 215 PANTHER PTHR30151:SF23 3 214 2.4E-31 T 22-04-2016 RM25_RS11015 52ace1451e0651ebffb07405e1eae119 215 PANTHER PTHR30151 3 214 2.4E-31 T 22-04-2016 RM25_RS11015 52ace1451e0651ebffb07405e1eae119 215 Gene3D G3DSA:1.10.3720.10 9 199 1.8E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11015 52ace1451e0651ebffb07405e1eae119 215 SUPERFAMILY SSF161098 10 195 9.03E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11180 113baecb4fa7b5c0bcb8e17f55258233 357 Pfam PF03050 Transposase IS66 family 47 320 2.9E-46 T 22-04-2016 IPR004291 Transposase, IS66 RM25_RS11180 113baecb4fa7b5c0bcb8e17f55258233 357 PANTHER PTHR33678:SF2 1 349 4.2E-46 T 22-04-2016 RM25_RS11180 113baecb4fa7b5c0bcb8e17f55258233 357 PANTHER PTHR33678 1 349 4.2E-46 T 22-04-2016 RM25_RS00425 113baecb4fa7b5c0bcb8e17f55258233 357 Pfam PF03050 Transposase IS66 family 47 320 2.9E-46 T 22-04-2016 IPR004291 Transposase, IS66 RM25_RS00425 113baecb4fa7b5c0bcb8e17f55258233 357 PANTHER PTHR33678:SF2 1 349 4.2E-46 T 22-04-2016 RM25_RS00425 113baecb4fa7b5c0bcb8e17f55258233 357 PANTHER PTHR33678 1 349 4.2E-46 T 22-04-2016 RM25_RS02740 113baecb4fa7b5c0bcb8e17f55258233 357 Pfam PF03050 Transposase IS66 family 47 320 2.9E-46 T 22-04-2016 IPR004291 Transposase, IS66 RM25_RS02740 113baecb4fa7b5c0bcb8e17f55258233 357 PANTHER PTHR33678:SF2 1 349 4.2E-46 T 22-04-2016 RM25_RS02740 113baecb4fa7b5c0bcb8e17f55258233 357 PANTHER PTHR33678 1 349 4.2E-46 T 22-04-2016 RM25_RS01325 113baecb4fa7b5c0bcb8e17f55258233 357 Pfam PF03050 Transposase IS66 family 47 320 2.9E-46 T 22-04-2016 IPR004291 Transposase, IS66 RM25_RS01325 113baecb4fa7b5c0bcb8e17f55258233 357 PANTHER PTHR33678:SF2 1 349 4.2E-46 T 22-04-2016 RM25_RS01325 113baecb4fa7b5c0bcb8e17f55258233 357 PANTHER PTHR33678 1 349 4.2E-46 T 22-04-2016 RM25_RS10430 113baecb4fa7b5c0bcb8e17f55258233 357 Pfam PF03050 Transposase IS66 family 47 320 2.9E-46 T 22-04-2016 IPR004291 Transposase, IS66 RM25_RS10430 113baecb4fa7b5c0bcb8e17f55258233 357 PANTHER PTHR33678:SF2 1 349 4.2E-46 T 22-04-2016 RM25_RS10430 113baecb4fa7b5c0bcb8e17f55258233 357 PANTHER PTHR33678 1 349 4.2E-46 T 22-04-2016 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 212 230 2.4E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 190 210 2.4E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 239 254 2.4E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 Gene3D G3DSA:3.40.50.300 6 175 3.4E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 PANTHER PTHR11649:SF5 10 447 7.9E-133 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 143 2.4E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 189 354 1.4E-27 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 PIRSF PIRSF006485 12 449 8.3E-159 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 363 441 2.5E-22 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 SUPERFAMILY SSF52540 15 177 1.3E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 SUPERFAMILY SSF52540 148 447 2.17E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 14 441 3.3E-159 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 Gene3D G3DSA:3.40.50.300 189 369 3.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 Hamap MF_00195 GTPase Der [der]. 13 444 35.274 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 PANTHER PTHR11649 10 447 7.9E-133 T 22-04-2016 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 SMART SM00382 186 404 0.24 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 SMART SM00382 12 150 0.07 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 Pfam PF01926 50S ribosome-binding GTPase 16 130 1.4E-26 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 Pfam PF01926 50S ribosome-binding GTPase 189 307 1.1E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS05245 6f390cd108b9c12ad3623c328f036883 449 Gene3D G3DSA:3.30.300.20 370 443 2.1E-24 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RM25_RS07030 544e36c673211a187ac9c66173a9bea1 476 Gene3D G3DSA:1.10.10.10 13 85 9.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07030 544e36c673211a187ac9c66173a9bea1 476 SMART SM00345 25 84 8.5E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS07030 544e36c673211a187ac9c66173a9bea1 476 Gene3D G3DSA:3.90.1150.10 364 436 4.7E-6 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS07030 544e36c673211a187ac9c66173a9bea1 476 PANTHER PTHR11751 128 474 1.5E-71 T 22-04-2016 RM25_RS07030 544e36c673211a187ac9c66173a9bea1 476 SUPERFAMILY SSF46785 14 93 1.16E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07030 544e36c673211a187ac9c66173a9bea1 476 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 84 9.1E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS07030 544e36c673211a187ac9c66173a9bea1 476 SUPERFAMILY SSF53383 78 475 1.04E-62 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS07030 544e36c673211a187ac9c66173a9bea1 476 Gene3D G3DSA:3.40.640.10 144 363 2.8E-37 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS07030 544e36c673211a187ac9c66173a9bea1 476 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.1E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS07030 544e36c673211a187ac9c66173a9bea1 476 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.1E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS07030 544e36c673211a187ac9c66173a9bea1 476 PANTHER PTHR11751:SF10 128 474 1.5E-71 T 22-04-2016 RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 PANTHER PTHR11482:SF49 445 543 9.1E-93 T 22-04-2016 RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 PANTHER PTHR11482:SF49 23 271 9.1E-93 T 22-04-2016 RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 PANTHER PTHR11482:SF49 323 429 9.1E-93 T 22-04-2016 RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 Gene3D G3DSA:3.20.20.10 56 268 5.2E-35 T 22-04-2016 IPR029066 PLP-binding barrel RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 PANTHER PTHR11482 445 543 9.1E-93 T 22-04-2016 RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 PANTHER PTHR11482 23 271 9.1E-93 T 22-04-2016 RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 PANTHER PTHR11482 323 429 9.1E-93 T 22-04-2016 RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 65 275 4.2E-18 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 SUPERFAMILY SSF50621 368 492 8.63E-7 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 Gene3D G3DSA:2.40.37.10 352 495 1.8E-30 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 Gene3D G3DSA:2.40.37.10 269 280 1.8E-30 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 SUPERFAMILY SSF51419 343 383 2.03E-29 T 22-04-2016 IPR029066 PLP-binding barrel RM25_RS11335 188a62aced9d155b984c5737dc6a6f96 569 SUPERFAMILY SSF51419 50 278 2.03E-29 T 22-04-2016 IPR029066 PLP-binding barrel RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 101 112 4.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 4.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 4.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 PANTHER PTHR24322 30 158 2.7E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 PANTHER PTHR24322 174 206 2.7E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 35 267 2.2E-52 T 22-04-2016 RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 SUPERFAMILY SSF51735 21 268 2.23E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 231 251 1.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 1.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 1.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 27 44 1.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 212 1.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 1.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS01370 d6e378d5b9b164bad01cfa1a96daa833 270 Gene3D G3DSA:3.40.50.720 18 268 8.5E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08020 187c36ecbacadc25665784cdc0dde3b9 222 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 6 204 26.438 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 RM25_RS08020 187c36ecbacadc25665784cdc0dde3b9 222 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 10 201 4.7E-55 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 RM25_RS08020 187c36ecbacadc25665784cdc0dde3b9 222 Gene3D G3DSA:3.10.300.10 10 207 2.3E-53 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 RM25_RS08020 187c36ecbacadc25665784cdc0dde3b9 222 PANTHER PTHR10429:SF0 10 220 7.6E-47 T 22-04-2016 RM25_RS08020 187c36ecbacadc25665784cdc0dde3b9 222 PANTHER PTHR10429 10 220 7.6E-47 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 RM25_RS08020 187c36ecbacadc25665784cdc0dde3b9 222 SUPERFAMILY SSF50486 10 207 7.85E-47 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RM25_RS08020 187c36ecbacadc25665784cdc0dde3b9 222 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 10 204 3.8E-41 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 RM25_RS05080 944a131523a6d23eae30b3d3a8f1c1bc 357 SUPERFAMILY SSF53756 116 316 6.51E-5 T 22-04-2016 RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 SUPERFAMILY SSF52540 14 350 6.38E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 Pfam PF13604 AAA domain 173 393 3.9E-34 T 22-04-2016 RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 PANTHER PTHR10887 537 590 3.6E-47 T 22-04-2016 RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 PANTHER PTHR10887 128 469 3.6E-47 T 22-04-2016 RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 PANTHER PTHR10887:SF284 537 590 3.6E-47 T 22-04-2016 RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 PANTHER PTHR10887:SF284 128 469 3.6E-47 T 22-04-2016 RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 Gene3D G3DSA:3.40.50.300 328 385 3.8E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 Gene3D G3DSA:3.40.50.300 419 472 3.8E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 Gene3D G3DSA:3.40.50.300 525 595 3.8E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 SUPERFAMILY SSF52540 312 383 1.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 SUPERFAMILY SSF52540 442 608 1.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 Gene3D G3DSA:3.40.50.300 173 327 6.9E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 Pfam PF13538 UvrD-like helicase C-terminal domain 538 584 2.3E-15 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 15 608 3.8E-128 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 RM25_RS05860 eadd7d3e3a976d534065ad96578ce693 616 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 22 608 42.125 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 Gene3D G3DSA:1.10.275.10 3 102 1.1E-36 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 PANTHER PTHR11444 1 449 1.4E-231 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 PRINTS PR00145 Argininosuccinate lyase family signature 138 158 7.2E-5 T 22-04-2016 RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 PRINTS PR00145 Argininosuccinate lyase family signature 97 119 7.2E-5 T 22-04-2016 RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 PRINTS PR00145 Argininosuccinate lyase family signature 280 296 7.2E-5 T 22-04-2016 RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 PANTHER PTHR11444:SF25 1 449 1.4E-231 T 22-04-2016 RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 Pfam PF10415 Fumarase C C-terminus 371 422 1.1E-16 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 Gene3D G3DSA:1.20.200.10 103 363 3.7E-83 T 22-04-2016 RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 Gene3D G3DSA:1.10.40.30 371 421 4.6E-18 T 22-04-2016 RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 Pfam PF00206 Lyase 8 305 2.9E-92 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 SUPERFAMILY SSF48557 5 419 6.48E-126 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 2.7E-29 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 PRINTS PR00149 Fumarate lyase superfamily signature 98 116 2.7E-29 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 PRINTS PR00149 Fumarate lyase superfamily signature 234 261 2.7E-29 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07640 b03a0f7d132eafaa56fef267ac56a792 451 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 2.7E-29 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS09500 631a8152588b2b70b83f3d468645757a 267 PANTHER PTHR33514 18 261 1.1E-18 T 22-04-2016 RM25_RS09500 631a8152588b2b70b83f3d468645757a 267 Pfam PF02361 Cobalt transport protein 18 220 2.2E-16 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 49 205 1.2E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 Gene3D G3DSA:3.30.230.10 255 447 1.2E-43 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 SMART SM00387 48 208 2.1E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 ProSitePatterns PS00177 DNA topoisomerase II signature. 479 487 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 SUPERFAMILY SSF56719 451 694 7.85E-74 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 Pfam PF01751 Toprim domain 476 576 7.8E-13 T 22-04-2016 IPR006171 Toprim domain RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 Gene3D G3DSA:3.40.50.670 462 680 1.1E-71 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR01159 DNA gyrase subunit B signature 431 451 2.4E-34 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR01159 DNA gyrase subunit B signature 23 33 2.4E-34 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR01159 DNA gyrase subunit B signature 527 536 2.4E-34 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR01159 DNA gyrase subunit B signature 652 664 2.4E-34 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR01159 DNA gyrase subunit B signature 214 229 2.4E-34 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR01159 DNA gyrase subunit B signature 365 381 2.4E-34 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR01159 DNA gyrase subunit B signature 668 684 2.4E-34 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR01159 DNA gyrase subunit B signature 229 242 2.4E-34 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR01159 DNA gyrase subunit B signature 255 277 2.4E-34 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR00418 DNA topoisomerase II family signature 561 578 5.7E-55 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR00418 DNA topoisomerase II family signature 581 593 5.7E-55 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR00418 DNA topoisomerase II family signature 87 100 5.7E-55 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR00418 DNA topoisomerase II family signature 130 144 5.7E-55 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR00418 DNA topoisomerase II family signature 477 491 5.7E-55 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR00418 DNA topoisomerase II family signature 543 559 5.7E-55 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR00418 DNA topoisomerase II family signature 322 335 5.7E-55 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR00418 DNA topoisomerase II family signature 631 647 5.7E-55 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PRINTS PR00418 DNA topoisomerase II family signature 52 67 5.7E-55 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 632 687 7.2E-23 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 SUPERFAMILY SSF55874 23 246 9.82E-58 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 Pfam PF00204 DNA gyrase B 256 447 1.2E-48 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 SUPERFAMILY SSF54211 302 447 1.76E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 SMART SM00433 52 692 1.1E-243 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PANTHER PTHR10169:SF20 1 701 7.8E-206 T 22-04-2016 RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 Gene3D G3DSA:3.30.565.10 23 247 6.5E-78 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS04470 6966c43468777ccfdc3c5915d4c43b87 701 PANTHER PTHR10169 1 701 7.8E-206 T 22-04-2016 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 167 180 5.8E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 261 277 5.8E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 191 219 5.8E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 243 260 5.8E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 350 376 5.8E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 25 509 82.189 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 201 207 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 25 509 2.0E-185 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 SUPERFAMILY SSF51735 17 214 1.51E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 PANTHER PTHR23429 16 510 4.5E-217 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 SUPERFAMILY SSF55347 201 508 2.45E-107 T 22-04-2016 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 Gene3D G3DSA:3.30.360.10 211 508 9.3E-115 T 22-04-2016 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 213 508 1.1E-106 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 PANTHER PTHR23429:SF0 16 510 4.5E-217 T 22-04-2016 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 PIRSF PIRSF000110 14 510 2.7E-168 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 Gene3D G3DSA:3.40.50.720 24 210 8.1E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07035 3a7bcf12f894b9bd29a57883be0f3491 510 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 29 211 3.5E-58 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RM25_RS02605 28465e95742251dbe064220e56b3c2d9 103 SMART SM01403 7 101 5.3E-60 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RM25_RS02605 28465e95742251dbe064220e56b3c2d9 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.729 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RM25_RS02605 28465e95742251dbe064220e56b3c2d9 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02605 28465e95742251dbe064220e56b3c2d9 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.2E-20 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RM25_RS02605 28465e95742251dbe064220e56b3c2d9 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.2E-20 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RM25_RS02605 28465e95742251dbe064220e56b3c2d9 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.2E-20 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RM25_RS02605 28465e95742251dbe064220e56b3c2d9 103 PANTHER PTHR11700 1 102 1.0E-52 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RM25_RS02605 28465e95742251dbe064220e56b3c2d9 103 SUPERFAMILY SSF54999 5 102 4.32E-39 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RM25_RS02605 28465e95742251dbe064220e56b3c2d9 103 Gene3D G3DSA:3.30.70.600 4 102 3.4E-45 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RM25_RS02605 28465e95742251dbe064220e56b3c2d9 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.6E-37 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RM25_RS02605 28465e95742251dbe064220e56b3c2d9 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.8E-48 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RM25_RS05420 bc5a3a595ad49e0837cdb916efa0cf64 516 Gene3D G3DSA:3.90.1300.10 9 490 7.6E-165 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RM25_RS05420 bc5a3a595ad49e0837cdb916efa0cf64 516 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 19 490 84.924 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RM25_RS05420 bc5a3a595ad49e0837cdb916efa0cf64 516 Pfam PF01425 Amidase 32 478 1.6E-151 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RM25_RS05420 bc5a3a595ad49e0837cdb916efa0cf64 516 PANTHER PTHR11895 18 487 1.4E-209 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RM25_RS05420 bc5a3a595ad49e0837cdb916efa0cf64 516 ProSitePatterns PS00571 Amidases signature. 160 191 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RM25_RS05420 bc5a3a595ad49e0837cdb916efa0cf64 516 SUPERFAMILY SSF75304 8 489 4.06E-152 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RM25_RS05420 bc5a3a595ad49e0837cdb916efa0cf64 516 PANTHER PTHR11895:SF75 18 487 1.4E-209 T 22-04-2016 RM25_RS05420 bc5a3a595ad49e0837cdb916efa0cf64 516 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 23 488 1.5E-174 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RM25_RS01505 cd04917f3fe32c6de7318f1d37e818eb 263 Pfam PF08543 Phosphomethylpyrimidine kinase 7 257 2.5E-85 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 RM25_RS01505 cd04917f3fe32c6de7318f1d37e818eb 263 Gene3D G3DSA:3.40.1190.20 1 259 3.9E-96 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS01505 cd04917f3fe32c6de7318f1d37e818eb 263 PANTHER PTHR20858:SF17 1 263 1.5E-110 T 22-04-2016 RM25_RS01505 cd04917f3fe32c6de7318f1d37e818eb 263 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 1 259 2.4E-93 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RM25_RS01505 cd04917f3fe32c6de7318f1d37e818eb 263 SUPERFAMILY SSF53613 1 263 8.89E-75 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS01505 cd04917f3fe32c6de7318f1d37e818eb 263 PANTHER PTHR20858 1 263 1.5E-110 T 22-04-2016 RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 Gene3D G3DSA:1.10.150.300 131 196 1.9E-14 T 22-04-2016 IPR023192 TGS-like domain RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 Gene3D G3DSA:3.10.20.30 261 354 1.0E-44 T 22-04-2016 IPR012675 Beta-grasp domain RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 SUPERFAMILY SSF52540 3 295 2.28E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 Pfam PF06071 Protein of unknown function (DUF933) 273 354 3.7E-37 T 22-04-2016 IPR013029 Domain of unknown function DUF933 RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 4.8E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 357 40.006 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 PANTHER PTHR23305 3 363 2.0E-166 T 22-04-2016 RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 PIRSF PIRSF006641 1 357 7.3E-131 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 Gene3D G3DSA:3.40.50.300 197 260 2.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 Gene3D G3DSA:3.40.50.300 4 130 2.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 SUPERFAMILY SSF81271 273 354 1.24E-34 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RM25_RS07905 37ead20ec1d0a56551bbee4ddeb4c30b 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 3 355 3.1E-125 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 Pfam PF07732 Multicopper oxidase 608 717 2.9E-13 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 Gene3D G3DSA:2.60.40.420 464 554 2.9E-9 T 22-04-2016 IPR008972 Cupredoxin RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 PANTHER PTHR11709:SF84 600 809 5.2E-17 T 22-04-2016 RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 PANTHER PTHR11709:SF84 203 243 5.2E-17 T 22-04-2016 RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 Gene3D G3DSA:2.60.40.420 713 865 1.2E-35 T 22-04-2016 IPR008972 Cupredoxin RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 PRINTS PR00695 Copper containing nitrite reductase signature 699 715 8.6E-8 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 PRINTS PR00695 Copper containing nitrite reductase signature 625 641 8.6E-8 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 PRINTS PR00695 Copper containing nitrite reductase signature 682 697 8.6E-8 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 Pfam PF13473 Cupredoxin-like domain 464 527 2.8E-6 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 SUPERFAMILY SSF49503 467 557 7.13E-9 T 22-04-2016 IPR008972 Cupredoxin RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 PANTHER PTHR11709 600 809 5.2E-17 T 22-04-2016 RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 PANTHER PTHR11709 203 243 5.2E-17 T 22-04-2016 RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 SUPERFAMILY SSF49503 717 876 1.21E-33 T 22-04-2016 IPR008972 Cupredoxin RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 Gene3D G3DSA:2.60.40.420 576 712 4.8E-31 T 22-04-2016 IPR008972 Cupredoxin RM25_RS01725 09b95e3de58868cd40101d0542d23539 878 SUPERFAMILY SSF49503 597 732 1.92E-32 T 22-04-2016 IPR008972 Cupredoxin RM25_RS05295 27afab60414a5c9d9aadce0e0742dd46 526 Pfam PF07690 Major Facilitator Superfamily 24 417 1.4E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS05295 27afab60414a5c9d9aadce0e0742dd46 526 PANTHER PTHR23501 13 525 4.4E-135 T 22-04-2016 RM25_RS05295 27afab60414a5c9d9aadce0e0742dd46 526 SUPERFAMILY SSF103473 479 507 2.49E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS05295 27afab60414a5c9d9aadce0e0742dd46 526 SUPERFAMILY SSF103473 13 203 2.49E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS05295 27afab60414a5c9d9aadce0e0742dd46 526 SUPERFAMILY SSF103473 256 427 2.49E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS05295 27afab60414a5c9d9aadce0e0742dd46 526 Gene3D G3DSA:1.20.1250.20 266 428 1.3E-21 T 22-04-2016 RM25_RS05295 27afab60414a5c9d9aadce0e0742dd46 526 Gene3D G3DSA:1.20.1250.20 480 512 1.3E-21 T 22-04-2016 RM25_RS05295 27afab60414a5c9d9aadce0e0742dd46 526 PANTHER PTHR23501:SF48 13 525 4.4E-135 T 22-04-2016 RM25_RS05295 27afab60414a5c9d9aadce0e0742dd46 526 Gene3D G3DSA:1.20.1250.20 13 204 3.9E-40 T 22-04-2016 RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 553 2.1E-138 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 PANTHER PTHR11772:SF2 2 388 1.1E-140 T 22-04-2016 RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 PANTHER PTHR11772:SF2 465 558 1.1E-140 T 22-04-2016 RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 PIRSF PIRSF001589 1 629 2.6E-165 T 22-04-2016 RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 Pfam PF00733 Asparagine synthase 247 615 8.3E-103 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 Gene3D G3DSA:3.60.20.10 1 225 5.9E-62 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 SUPERFAMILY SSF52402 473 611 2.07E-82 T 22-04-2016 RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 SUPERFAMILY SSF52402 241 386 2.07E-82 T 22-04-2016 RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 PANTHER PTHR11772 2 388 1.1E-140 T 22-04-2016 RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 PANTHER PTHR11772 465 558 1.1E-140 T 22-04-2016 RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 Gene3D G3DSA:3.40.50.620 226 382 3.1E-96 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 Gene3D G3DSA:3.40.50.620 468 615 3.1E-96 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 SUPERFAMILY SSF56235 1 227 2.4E-51 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RM25_RS08905 2d8a3cd136134e60ccc242ac0436bcb3 636 Pfam PF13537 Glutamine amidotransferase domain 49 172 9.8E-35 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 Gene3D G3DSA:1.10.40.30 381 438 1.9E-25 T 22-04-2016 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 PANTHER PTHR11444 9 462 1.9E-183 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 PRINTS PR00145 Argininosuccinate lyase family signature 149 169 2.1E-48 T 22-04-2016 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 PRINTS PR00145 Argininosuccinate lyase family signature 238 262 2.1E-48 T 22-04-2016 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 PRINTS PR00145 Argininosuccinate lyase family signature 317 336 2.1E-48 T 22-04-2016 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 PRINTS PR00145 Argininosuccinate lyase family signature 108 130 2.1E-48 T 22-04-2016 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 PRINTS PR00145 Argininosuccinate lyase family signature 200 216 2.1E-48 T 22-04-2016 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 PRINTS PR00145 Argininosuccinate lyase family signature 282 298 2.1E-48 T 22-04-2016 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 PANTHER PTHR11444:SF3 9 462 1.9E-183 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 Hamap MF_00006 Argininosuccinate lyase [argH]. 8 460 37.933 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 Gene3D G3DSA:1.20.200.10 114 380 1.4E-87 T 22-04-2016 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 TIGRFAM TIGR00838 argH: argininosuccinate lyase 9 461 3.0E-162 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 PRINTS PR00149 Fumarate lyase superfamily signature 109 127 5.6E-23 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 PRINTS PR00149 Fumarate lyase superfamily signature 282 298 5.6E-23 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 PRINTS PR00149 Fumarate lyase superfamily signature 238 265 5.6E-23 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 PRINTS PR00149 Fumarate lyase superfamily signature 154 172 5.6E-23 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 Gene3D G3DSA:1.10.275.10 9 113 1.0E-31 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 Pfam PF14698 Argininosuccinate lyase C-terminal 370 438 3.1E-20 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 ProSitePatterns PS00163 Fumarate lyases signature. 282 291 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 Pfam PF00206 Lyase 14 307 5.5E-58 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RM25_RS06485 7ed102af0a805cddef9f369554c15df6 473 SUPERFAMILY SSF48557 12 460 5.03E-123 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 Gene3D G3DSA:3.30.56.10 175 203 5.8E-15 T 22-04-2016 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 Gene3D G3DSA:3.30.56.10 1 40 5.8E-15 T 22-04-2016 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 SMART SM00896 747 840 1.5E-34 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 Pfam PF03484 tRNA synthetase B5 domain 430 484 6.0E-7 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 SMART SM00873 231 404 1.7E-73 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 SUPERFAMILY SSF56037 228 415 1.1E-63 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 Pfam PF03147 Ferredoxin-fold anticodon binding domain 747 840 3.1E-23 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 Gene3D G3DSA:3.30.56.20 429 484 9.4E-11 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 SUPERFAMILY SSF54991 744 840 2.22E-24 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 834 36.979 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 PANTHER PTHR10947:SF0 2 602 7.1E-205 T 22-04-2016 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 PANTHER PTHR10947:SF0 623 840 7.1E-205 T 22-04-2016 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 PANTHER PTHR10947 2 602 7.1E-205 T 22-04-2016 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 PANTHER PTHR10947 623 840 7.1E-205 T 22-04-2016 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 Pfam PF03483 B3/4 domain 232 404 1.7E-59 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 Gene3D G3DSA:3.30.70.380 749 840 4.3E-27 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 SMART SM00874 420 488 3.8E-5 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 SUPERFAMILY SSF55681 629 734 7.45E-32 T 22-04-2016 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 SUPERFAMILY SSF55681 504 600 7.45E-32 T 22-04-2016 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 Gene3D G3DSA:3.50.40.10 226 412 3.3E-71 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 Pfam PF01588 Putative tRNA binding domain 48 155 8.6E-10 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 Gene3D G3DSA:2.40.50.140 43 172 5.7E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 SUPERFAMILY SSF50249 47 208 2.2E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 Gene3D G3DSA:3.30.930.10 504 734 2.8E-55 T 22-04-2016 RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 SUPERFAMILY SSF46955 424 488 1.37E-7 T 22-04-2016 IPR009061 Putative DNA-binding domain RM25_RS06520 9af76e454d5e1e41d0cc6ea0fe316f31 842 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 840 4.1E-166 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RM25_RS08160 411130c34cc7758b55eea388f4851c90 253 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 9.2E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS08160 411130c34cc7758b55eea388f4851c90 253 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 9.2E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS08160 411130c34cc7758b55eea388f4851c90 253 PANTHER PTHR30328:SF12 1 203 6.6E-59 T 22-04-2016 RM25_RS08160 411130c34cc7758b55eea388f4851c90 253 SUPERFAMILY SSF46689 3 73 6.98E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS08160 411130c34cc7758b55eea388f4851c90 253 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 52 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RM25_RS08160 411130c34cc7758b55eea388f4851c90 253 PANTHER PTHR30328 1 203 6.6E-59 T 22-04-2016 RM25_RS08160 411130c34cc7758b55eea388f4851c90 253 SUPERFAMILY SSF48498 79 189 6.89E-7 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RM25_RS08160 411130c34cc7758b55eea388f4851c90 253 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 54 4.2E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS08160 411130c34cc7758b55eea388f4851c90 253 Gene3D G3DSA:1.10.357.10 2 187 1.4E-39 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS07540 d108390856f75d7d9180ba9547eef9ad 287 PANTHER PTHR32308:SF0 4 287 1.7E-87 T 22-04-2016 RM25_RS07540 d108390856f75d7d9180ba9547eef9ad 287 Gene3D G3DSA:3.20.20.60 3 231 1.6E-73 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RM25_RS07540 d108390856f75d7d9180ba9547eef9ad 287 SUPERFAMILY SSF51621 3 231 2.77E-66 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RM25_RS07540 d108390856f75d7d9180ba9547eef9ad 287 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 221 2.8E-46 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RM25_RS07540 d108390856f75d7d9180ba9547eef9ad 287 PIRSF PIRSF015582 1 287 4.9E-79 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like RM25_RS07540 d108390856f75d7d9180ba9547eef9ad 287 PANTHER PTHR32308 4 287 1.7E-87 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like RM25_RS01200 a59dd1adfb77140a487505fb1b6ce65a 267 PANTHER PTHR18964:SF138 6 247 1.1E-55 T 22-04-2016 RM25_RS01200 a59dd1adfb77140a487505fb1b6ce65a 267 PANTHER PTHR18964 6 247 1.1E-55 T 22-04-2016 RM25_RS01200 a59dd1adfb77140a487505fb1b6ce65a 267 SUPERFAMILY SSF53067 6 251 3.15E-36 T 22-04-2016 RM25_RS01200 a59dd1adfb77140a487505fb1b6ce65a 267 Pfam PF00480 ROK family 8 166 2.3E-18 T 22-04-2016 IPR000600 ROK family RM25_RS01200 a59dd1adfb77140a487505fb1b6ce65a 267 Gene3D G3DSA:3.30.420.40 111 247 1.1E-36 T 22-04-2016 RM25_RS01200 a59dd1adfb77140a487505fb1b6ce65a 267 Gene3D G3DSA:3.30.420.40 5 110 2.0E-37 T 22-04-2016 RM25_RS07125 ca0a9bd1ec418d20cfd898f2e6e61cf4 178 Pfam PF13302 Acetyltransferase (GNAT) domain 16 147 9.8E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS07125 ca0a9bd1ec418d20cfd898f2e6e61cf4 178 Gene3D G3DSA:3.40.630.30 6 172 1.9E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS07125 ca0a9bd1ec418d20cfd898f2e6e61cf4 178 SUPERFAMILY SSF55729 8 155 2.9E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS11220 a2f9fecb0ad1462754da58a2dc098308 917 SUPERFAMILY SSF49503 768 915 3.62E-38 T 22-04-2016 IPR008972 Cupredoxin RM25_RS11220 a2f9fecb0ad1462754da58a2dc098308 917 PRINTS PR00695 Copper containing nitrite reductase signature 750 766 3.2E-6 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 RM25_RS11220 a2f9fecb0ad1462754da58a2dc098308 917 PRINTS PR00695 Copper containing nitrite reductase signature 733 748 3.2E-6 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 RM25_RS11220 a2f9fecb0ad1462754da58a2dc098308 917 PRINTS PR00695 Copper containing nitrite reductase signature 676 692 3.2E-6 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 RM25_RS11220 a2f9fecb0ad1462754da58a2dc098308 917 SUPERFAMILY SSF49503 651 783 7.72E-32 T 22-04-2016 IPR008972 Cupredoxin RM25_RS11220 a2f9fecb0ad1462754da58a2dc098308 917 Gene3D G3DSA:2.60.40.420 764 905 1.8E-38 T 22-04-2016 IPR008972 Cupredoxin RM25_RS11220 a2f9fecb0ad1462754da58a2dc098308 917 Gene3D G3DSA:2.60.40.420 645 763 8.8E-29 T 22-04-2016 IPR008972 Cupredoxin RM25_RS11220 a2f9fecb0ad1462754da58a2dc098308 917 SUPERFAMILY SSF49503 517 613 9.42E-10 T 22-04-2016 IPR008972 Cupredoxin RM25_RS11220 a2f9fecb0ad1462754da58a2dc098308 917 Pfam PF13473 Cupredoxin-like domain 516 579 1.7E-8 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain RM25_RS11220 a2f9fecb0ad1462754da58a2dc098308 917 Pfam PF07732 Multicopper oxidase 659 767 7.2E-14 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 RM25_RS11220 a2f9fecb0ad1462754da58a2dc098308 917 Gene3D G3DSA:2.60.40.420 514 607 7.2E-11 T 22-04-2016 IPR008972 Cupredoxin RM25_RS04945 786a13010b1d78cd55212c72d7f92a37 323 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 140 152 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RM25_RS04945 786a13010b1d78cd55212c72d7f92a37 323 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 259 2.0E-65 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RM25_RS04945 786a13010b1d78cd55212c72d7f92a37 323 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 8 264 16.366 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RM25_RS04945 786a13010b1d78cd55212c72d7f92a37 323 PANTHER PTHR30589 2 283 7.1E-95 T 22-04-2016 RM25_RS04945 786a13010b1d78cd55212c72d7f92a37 323 PANTHER PTHR30589:SF0 2 283 7.1E-95 T 22-04-2016 RM25_RS04945 786a13010b1d78cd55212c72d7f92a37 323 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 12 259 1.7E-51 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RM25_RS06000 4f6a053465b8719a3bf932934ae4eaaa 153 PANTHER PTHR28055:SF1 1 153 4.0E-37 T 22-04-2016 RM25_RS06000 4f6a053465b8719a3bf932934ae4eaaa 153 Gene3D G3DSA:1.10.10.410 93 151 7.4E-15 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RM25_RS06000 4f6a053465b8719a3bf932934ae4eaaa 153 Pfam PF09424 Yqey-like protein 5 150 2.6E-40 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial RM25_RS06000 4f6a053465b8719a3bf932934ae4eaaa 153 Gene3D G3DSA:1.10.1510.10 3 92 1.3E-27 T 22-04-2016 RM25_RS06000 4f6a053465b8719a3bf932934ae4eaaa 153 PANTHER PTHR28055 1 153 4.0E-37 T 22-04-2016 RM25_RS06000 4f6a053465b8719a3bf932934ae4eaaa 153 SUPERFAMILY SSF89095 4 151 5.75E-33 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RM25_RS10575 34556c931537c9e3f98b342741074655 142 SUPERFAMILY SSF47413 43 89 2.02E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS10575 34556c931537c9e3f98b342741074655 142 Gene3D G3DSA:1.10.260.40 45 89 3.5E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 Gene3D G3DSA:3.30.870.10 522 704 3.5E-62 T 22-04-2016 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 SUPERFAMILY SSF56024 522 703 3.36E-60 T 22-04-2016 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 Pfam PF13089 Polyphosphate kinase N-terminal domain 28 135 1.9E-37 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 PANTHER PTHR30218 9 725 0.0 T 22-04-2016 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 Hamap MF_00347 Polyphosphate kinase [ppk]. 25 702 32.534 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 PIRSF PIRSF015589 9 717 4.2E-265 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 SUPERFAMILY SSF56024 341 517 6.73E-56 T 22-04-2016 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 27 699 1.2E-240 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 PANTHER PTHR30218:SF0 9 725 0.0 T 22-04-2016 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 SUPERFAMILY SSF140356 25 129 5.89E-36 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 SUPERFAMILY SSF143724 133 329 1.22E-60 T 22-04-2016 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 Gene3D G3DSA:3.30.870.10 339 521 2.1E-76 T 22-04-2016 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 Gene3D G3DSA:3.30.1840.10 132 317 5.4E-66 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 Pfam PF13090 Polyphosphate kinase C-terminal domain 351 699 3.4E-145 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 RM25_RS09375 6faa7da974daea8fcc6a2a24b36292e6 729 Pfam PF02503 Polyphosphate kinase middle domain 144 338 1.7E-63 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RM25_RS10065 acadae062015b855b9d23cfd6b779b28 160 PANTHER PTHR30345 1 145 1.0E-69 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS10065 acadae062015b855b9d23cfd6b779b28 160 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 143 1.1E-57 T 22-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 RM25_RS10065 acadae062015b855b9d23cfd6b779b28 160 SUPERFAMILY SSF89623 1 144 1.31E-56 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS10065 acadae062015b855b9d23cfd6b779b28 160 Gene3D G3DSA:3.40.1400.10 1 147 2.4E-62 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS10065 acadae062015b855b9d23cfd6b779b28 160 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 144 4.4E-56 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS10065 acadae062015b855b9d23cfd6b779b28 160 Pfam PF02502 Ribose/Galactose Isomerase 3 140 4.7E-55 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS10065 acadae062015b855b9d23cfd6b779b28 160 PIRSF PIRSF005384 1 147 2.5E-57 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 374 392 1.6E-37 T 22-04-2016 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 459 475 1.6E-37 T 22-04-2016 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 251 1.6E-37 T 22-04-2016 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 485 507 1.6E-37 T 22-04-2016 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 332 350 1.6E-37 T 22-04-2016 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 Gene3D G3DSA:3.50.50.60 229 336 6.4E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 18 534 4.4E-216 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PIRSF PIRSF000238 18 538 1.2E-224 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 362 382 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 Gene3D G3DSA:3.50.50.60 337 525 8.2E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 231 253 9.1E-64 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 422 438 9.1E-64 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 263 278 9.1E-64 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 283 293 9.1E-64 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 495 513 9.1E-64 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 461 482 9.1E-64 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 370 394 9.1E-64 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 355 367 9.1E-64 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 333 341 9.1E-64 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 Pfam PF13192 Thioredoxin domain 142 205 5.2E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 SUPERFAMILY SSF51905 222 528 1.61E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 SUPERFAMILY SSF52833 121 210 5.89E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 Gene3D G3DSA:3.40.30.10 120 212 5.3E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 230 520 3.4E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 SUPERFAMILY SSF52833 19 118 4.7E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PANTHER PTHR22912 216 530 3.3E-160 T 22-04-2016 RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 Gene3D G3DSA:3.40.30.10 18 111 1.1E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS02465 734964df71b65dfa2daf0ddea5592178 566 PANTHER PTHR22912:SF107 216 530 3.3E-160 T 22-04-2016 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 SUPERFAMILY SSF52540 8 205 3.78E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 SUPERFAMILY SSF52540 436 575 3.78E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 PANTHER PTHR32282 1 949 0.0 T 22-04-2016 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Gene3D G3DSA:1.20.1580.10 698 824 2.1E-55 T 22-04-2016 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Gene3D G3DSA:1.10.8.280 291 412 6.6E-34 T 22-04-2016 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 ProSitePatterns PS00211 ABC transporters family signature. 834 848 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 SUPERFAMILY SSF52540 625 914 5.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Gene3D G3DSA:3.30.1490.20 131 154 3.1E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Gene3D G3DSA:3.30.1490.20 201 241 3.1E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 944 22.892 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 SMART SM00382 637 926 0.0026 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 929 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 PANTHER PTHR32282:SF2 1 949 0.0 T 22-04-2016 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Gene3D G3DSA:1.20.1580.10 92 130 1.5E-53 T 22-04-2016 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Gene3D G3DSA:1.20.1580.10 255 289 1.5E-53 T 22-04-2016 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Gene3D G3DSA:1.20.1580.10 413 483 1.5E-53 T 22-04-2016 RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Gene3D G3DSA:3.40.50.300 825 943 8.7E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Gene3D G3DSA:3.40.50.300 613 677 8.7E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Gene3D G3DSA:3.40.50.300 484 602 2.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Gene3D G3DSA:3.40.50.300 5 90 2.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07130 e1455f9eb4fb2edb2d23c56eeb089138 1018 Pfam PF00005 ABC transporter 628 864 8.9E-10 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 Pfam PF01890 Cobalamin synthesis G C-terminus 448 562 3.5E-32 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 Gene3D G3DSA:3.30.950.10 99 187 2.7E-10 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 SUPERFAMILY SSF53790 10 194 1.57E-24 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 PANTHER PTHR37477 223 572 4.2E-49 T 22-04-2016 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 SUPERFAMILY SSF159664 441 566 1.1E-34 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 SUPERFAMILY SSF159672 244 455 4.18E-43 T 22-04-2016 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 Gene3D G3DSA:3.40.1010.10 569 678 1.6E-25 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 Gene3D G3DSA:3.40.1010.10 8 98 6.9E-15 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 14 180 1.6E-30 T 22-04-2016 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 Gene3D G3DSA:3.30.950.10 680 790 1.8E-11 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 Gene3D G3DSA:3.30.420.180 440 564 5.1E-33 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 173 4.0E-16 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 570 774 1.6E-38 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 Pfam PF11760 Cobalamin synthesis G N-terminal 278 355 1.8E-30 T 22-04-2016 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 PANTHER PTHR37477:SF1 223 572 4.2E-49 T 22-04-2016 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 SUPERFAMILY SSF53790 568 808 7.33E-53 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS03600 bed331f2a969a8c110acddac8757069b 881 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 571 811 3.3E-77 T 22-04-2016 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 RM25_RS10695 d1206968a30388edd59794d5c2dd9e92 101 PANTHER PTHR33215 8 98 3.4E-25 T 22-04-2016 RM25_RS10695 d1206968a30388edd59794d5c2dd9e92 101 Pfam PF01527 Transposase 9 80 8.0E-14 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RM25_RS10695 d1206968a30388edd59794d5c2dd9e92 101 Gene3D G3DSA:1.10.10.60 17 95 3.9E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10695 d1206968a30388edd59794d5c2dd9e92 101 SUPERFAMILY SSF46689 12 98 3.4E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS07850 d1206968a30388edd59794d5c2dd9e92 101 PANTHER PTHR33215 8 98 3.4E-25 T 22-04-2016 RM25_RS07850 d1206968a30388edd59794d5c2dd9e92 101 Pfam PF01527 Transposase 9 80 8.0E-14 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RM25_RS07850 d1206968a30388edd59794d5c2dd9e92 101 Gene3D G3DSA:1.10.10.60 17 95 3.9E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS07850 d1206968a30388edd59794d5c2dd9e92 101 SUPERFAMILY SSF46689 12 98 3.4E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS07115 0022fa10d887ef175b488a04dd54678e 317 SUPERFAMILY SSF52540 3 244 2.63E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07115 0022fa10d887ef175b488a04dd54678e 317 SMART SM00382 26 239 3.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS07115 0022fa10d887ef175b488a04dd54678e 317 PANTHER PTHR24220 3 146 2.6E-77 T 22-04-2016 RM25_RS07115 0022fa10d887ef175b488a04dd54678e 317 PANTHER PTHR24220 171 246 2.6E-77 T 22-04-2016 RM25_RS07115 0022fa10d887ef175b488a04dd54678e 317 PANTHER PTHR24220:SF450 3 146 2.6E-77 T 22-04-2016 RM25_RS07115 0022fa10d887ef175b488a04dd54678e 317 PANTHER PTHR24220:SF450 171 246 2.6E-77 T 22-04-2016 RM25_RS07115 0022fa10d887ef175b488a04dd54678e 317 Pfam PF13732 Domain of unknown function (DUF4162) 236 316 6.5E-7 T 22-04-2016 IPR025302 Domain of unknown function DUF4162 RM25_RS07115 0022fa10d887ef175b488a04dd54678e 317 Pfam PF00005 ABC transporter 18 148 1.2E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS07115 0022fa10d887ef175b488a04dd54678e 317 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS07115 0022fa10d887ef175b488a04dd54678e 317 Gene3D G3DSA:3.40.50.300 1 253 5.2E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06885 ab6eed939f2bed2ad6341570439dcf62 237 SUPERFAMILY SSF53633 6 236 1.83E-67 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RM25_RS06885 ab6eed939f2bed2ad6341570439dcf62 237 PANTHER PTHR21499 5 235 3.4E-103 T 22-04-2016 RM25_RS06885 ab6eed939f2bed2ad6341570439dcf62 237 Hamap MF_01220_B Uridylate kinase [pyrH]. 3 236 41.653 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RM25_RS06885 ab6eed939f2bed2ad6341570439dcf62 237 Gene3D G3DSA:3.40.1160.10 5 236 1.2E-79 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RM25_RS06885 ab6eed939f2bed2ad6341570439dcf62 237 Pfam PF00696 Amino acid kinase family 7 215 9.6E-26 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RM25_RS06885 ab6eed939f2bed2ad6341570439dcf62 237 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 236 5.0E-89 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RM25_RS06885 ab6eed939f2bed2ad6341570439dcf62 237 PIRSF PIRSF005650 2 237 7.8E-86 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RM25_RS06885 ab6eed939f2bed2ad6341570439dcf62 237 PANTHER PTHR21499:SF23 5 235 3.4E-103 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RM25_RS09505 f8d435460b25ab86774780fdcbbee2e8 193 Gene3D G3DSA:3.40.50.300 11 182 1.5E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09505 f8d435460b25ab86774780fdcbbee2e8 193 SUPERFAMILY SSF52540 24 182 6.32E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00025 f0f07b6bb2f701536759ed293d079a60 415 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 290 9.4E-20 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RM25_RS00025 f0f07b6bb2f701536759ed293d079a60 415 PANTHER PTHR10366:SF337 2 220 2.5E-122 T 22-04-2016 RM25_RS00025 f0f07b6bb2f701536759ed293d079a60 415 PANTHER PTHR10366:SF337 239 392 2.5E-122 T 22-04-2016 RM25_RS00025 f0f07b6bb2f701536759ed293d079a60 415 SUPERFAMILY SSF51735 1 360 1.43E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00025 f0f07b6bb2f701536759ed293d079a60 415 Gene3D G3DSA:3.40.50.720 1 221 1.5E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00025 f0f07b6bb2f701536759ed293d079a60 415 Gene3D G3DSA:3.90.25.10 222 376 1.2E-31 T 22-04-2016 RM25_RS00025 f0f07b6bb2f701536759ed293d079a60 415 PANTHER PTHR10366 2 220 2.5E-122 T 22-04-2016 RM25_RS00025 f0f07b6bb2f701536759ed293d079a60 415 PANTHER PTHR10366 239 392 2.5E-122 T 22-04-2016 RM25_RS04730 d09b947ed269d178a5714b97f8f61038 735 PANTHER PTHR30294:SF25 514 721 2.0E-47 T 22-04-2016 RM25_RS04730 d09b947ed269d178a5714b97f8f61038 735 PANTHER PTHR30294:SF25 5 242 2.0E-47 T 22-04-2016 RM25_RS04730 d09b947ed269d178a5714b97f8f61038 735 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 456 482 3.1E-5 T 22-04-2016 IPR023908 xxxLxxG heptad repeat RM25_RS04730 d09b947ed269d178a5714b97f8f61038 735 PANTHER PTHR30294 514 721 2.0E-47 T 22-04-2016 RM25_RS04730 d09b947ed269d178a5714b97f8f61038 735 PANTHER PTHR30294 5 242 2.0E-47 T 22-04-2016 RM25_RS04730 d09b947ed269d178a5714b97f8f61038 735 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 503 708 6.9E-54 T 22-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal RM25_RS04730 d09b947ed269d178a5714b97f8f61038 735 Pfam PF12698 ABC-2 family transporter protein 31 187 1.0E-8 T 22-04-2016 RM25_RS04730 d09b947ed269d178a5714b97f8f61038 735 Pfam PF12698 ABC-2 family transporter protein 477 697 1.9E-14 T 22-04-2016 RM25_RS04730 d09b947ed269d178a5714b97f8f61038 735 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 20 181 1.7E-46 T 22-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal RM25_RS02710 83253d2b70035666c3404f35ad909c1a 206 SUPERFAMILY SSF52218 12 146 2.95E-18 T 22-04-2016 IPR029039 Flavoprotein-like domain RM25_RS02710 83253d2b70035666c3404f35ad909c1a 206 Pfam PF03358 NADPH-dependent FMN reductase 3 145 7.6E-26 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RM25_RS02710 83253d2b70035666c3404f35ad909c1a 206 Gene3D G3DSA:3.40.50.360 4 167 5.2E-22 T 22-04-2016 IPR029039 Flavoprotein-like domain RM25_RS02710 83253d2b70035666c3404f35ad909c1a 206 PANTHER PTHR30543 1 184 3.1E-30 T 22-04-2016 RM25_RS02710 83253d2b70035666c3404f35ad909c1a 206 PANTHER PTHR30543:SF8 1 184 3.1E-30 T 22-04-2016 RM25_RS02710 83253d2b70035666c3404f35ad909c1a 206 TIGRFAM TIGR04037 LLM_duo_CE1759: LLM-partnered FMN reductase, CE1759 family 1 203 1.0E-53 T 22-04-2016 IPR023932 Uncharacterised protein family, CE1759 RM25_RS04475 aa94d07793526a624c92ad23dfb4a8f1 305 PANTHER PTHR21708 1 298 4.9E-52 T 22-04-2016 RM25_RS04475 aa94d07793526a624c92ad23dfb4a8f1 305 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 151 8.7E-30 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RM25_RS04475 aa94d07793526a624c92ad23dfb4a8f1 305 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 300 2.4E-63 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RM25_RS04475 aa94d07793526a624c92ad23dfb4a8f1 305 Gene3D G3DSA:3.40.50.720 1 174 2.3E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04475 aa94d07793526a624c92ad23dfb4a8f1 305 SUPERFAMILY SSF48179 177 300 1.12E-25 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RM25_RS04475 aa94d07793526a624c92ad23dfb4a8f1 305 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 177 299 1.1E-23 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RM25_RS04475 aa94d07793526a624c92ad23dfb4a8f1 305 SUPERFAMILY SSF51735 1 120 2.1E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04475 aa94d07793526a624c92ad23dfb4a8f1 305 PANTHER PTHR21708:SF26 1 298 4.9E-52 T 22-04-2016 RM25_RS04475 aa94d07793526a624c92ad23dfb4a8f1 305 Gene3D G3DSA:1.10.1040.10 179 299 5.5E-29 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 Pfam PF00994 Probable molybdopterin binding domain 204 341 2.1E-11 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 PANTHER PTHR10192 30 427 6.8E-72 T 22-04-2016 RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 SUPERFAMILY SSF63867 356 426 9.16E-10 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 Gene3D G3DSA:2.170.190.11 77 153 2.8E-14 T 22-04-2016 RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 Pfam PF03454 MoeA C-terminal region (domain IV) 357 425 1.2E-7 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 SUPERFAMILY SSF63882 35 199 2.22E-32 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 Gene3D G3DSA:3.40.980.10 184 357 5.9E-34 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 Pfam PF03453 MoeA N-terminal region (domain I and II) 36 190 5.9E-24 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 SUPERFAMILY SSF53218 200 346 7.85E-21 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 Gene3D G3DSA:3.90.105.10 154 183 1.0E-12 T 22-04-2016 RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 SMART SM00852 203 342 2.5E-9 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 PANTHER PTHR10192:SF12 30 427 6.8E-72 T 22-04-2016 RM25_RS08490 7ed26de049eeb3394055cb5f27e72595 428 Gene3D G3DSA:2.40.340.10 358 426 6.4E-10 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS04060 488c915d7c96719d33ae63559385c138 86 Pfam PF01649 Ribosomal protein S20 2 83 3.9E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS04060 488c915d7c96719d33ae63559385c138 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.955 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS04060 488c915d7c96719d33ae63559385c138 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 85 2.5E-21 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS04060 488c915d7c96719d33ae63559385c138 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 86 9.0E-19 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS04060 488c915d7c96719d33ae63559385c138 86 Gene3D G3DSA:1.20.58.110 3 86 1.3E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS04060 488c915d7c96719d33ae63559385c138 86 PANTHER PTHR33398 2 77 8.3E-27 T 22-04-2016 RM25_RS04060 488c915d7c96719d33ae63559385c138 86 SUPERFAMILY SSF46992 3 86 3.27E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02370 9bc0cbfb105792ca3a8ec051faff53bb 456 Pfam PF00146 NADH dehydrogenase 20 353 5.7E-116 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RM25_RS02370 9bc0cbfb105792ca3a8ec051faff53bb 456 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 235 248 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 RM25_RS02370 9bc0cbfb105792ca3a8ec051faff53bb 456 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 13 360 23.618 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RM25_RS02370 9bc0cbfb105792ca3a8ec051faff53bb 456 PANTHER PTHR11432 13 365 1.8E-141 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RM25_RS02370 9bc0cbfb105792ca3a8ec051faff53bb 456 PANTHER PTHR11432:SF3 13 365 1.8E-141 T 22-04-2016 RM25_RS11190 661c8993b15377c0c776ca2a94874d39 229 PANTHER PTHR24567 17 227 1.1E-32 T 22-04-2016 RM25_RS11190 661c8993b15377c0c776ca2a94874d39 229 SUPERFAMILY SSF46785 154 227 1.25E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS11190 661c8993b15377c0c776ca2a94874d39 229 Gene3D G3DSA:1.10.10.10 154 227 1.9E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS11190 661c8993b15377c0c776ca2a94874d39 229 SMART SM00100 21 139 2.6E-6 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RM25_RS11190 661c8993b15377c0c776ca2a94874d39 229 SUPERFAMILY SSF51206 17 147 7.73E-24 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RM25_RS11190 661c8993b15377c0c776ca2a94874d39 229 PANTHER PTHR24567:SF30 17 227 1.1E-32 T 22-04-2016 RM25_RS11190 661c8993b15377c0c776ca2a94874d39 229 SMART SM00419 171 219 8.7E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RM25_RS11190 661c8993b15377c0c776ca2a94874d39 229 Gene3D G3DSA:2.60.120.10 19 148 4.3E-20 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RM25_RS11190 661c8993b15377c0c776ca2a94874d39 229 Pfam PF00027 Cyclic nucleotide-binding domain 54 124 2.2E-11 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RM25_RS11190 661c8993b15377c0c776ca2a94874d39 229 Pfam PF13545 Crp-like helix-turn-helix domain 155 226 7.0E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RM25_RS02680 123d67d39164309db9a46a08bdf978c6 135 PANTHER PTHR11758 1 135 1.5E-56 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RM25_RS02680 123d67d39164309db9a46a08bdf978c6 135 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 135 31.877 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RM25_RS02680 123d67d39164309db9a46a08bdf978c6 135 Gene3D G3DSA:3.30.1370.30 2 75 4.5E-28 T 22-04-2016 RM25_RS02680 123d67d39164309db9a46a08bdf978c6 135 Pfam PF00410 Ribosomal protein S8 5 135 1.5E-50 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RM25_RS02680 123d67d39164309db9a46a08bdf978c6 135 ProSitePatterns PS00053 Ribosomal protein S8 signature. 105 122 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RM25_RS02680 123d67d39164309db9a46a08bdf978c6 135 Gene3D G3DSA:3.30.1490.10 79 135 1.1E-28 T 22-04-2016 RM25_RS02680 123d67d39164309db9a46a08bdf978c6 135 SUPERFAMILY SSF56047 3 135 1.09E-43 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RM25_RS04095 6462070e221e0934c72ab04232f57fb9 336 Gene3D G3DSA:1.10.10.10 1 84 1.7E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04095 6462070e221e0934c72ab04232f57fb9 336 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 326 25.9 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RM25_RS04095 6462070e221e0934c72ab04232f57fb9 336 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 331 1.3E-83 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RM25_RS04095 6462070e221e0934c72ab04232f57fb9 336 Pfam PF01628 HrcA protein C terminal domain 103 319 1.9E-50 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 RM25_RS04095 6462070e221e0934c72ab04232f57fb9 336 Gene3D G3DSA:3.30.450.40 177 335 2.2E-30 T 22-04-2016 IPR029016 GAF domain-like RM25_RS04095 6462070e221e0934c72ab04232f57fb9 336 Pfam PF08220 DeoR-like helix-turn-helix domain 16 62 5.3E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RM25_RS04095 6462070e221e0934c72ab04232f57fb9 336 PIRSF PIRSF005485 1 336 9.3E-93 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RM25_RS04095 6462070e221e0934c72ab04232f57fb9 336 SUPERFAMILY SSF55781 71 334 8.24E-48 T 22-04-2016 IPR029016 GAF domain-like RM25_RS04095 6462070e221e0934c72ab04232f57fb9 336 SUPERFAMILY SSF46785 1 83 2.43E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04095 6462070e221e0934c72ab04232f57fb9 336 PANTHER PTHR34824 1 335 2.0E-95 T 22-04-2016 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 SMART SM00954 289 399 3.2E-67 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 SUPERFAMILY SSF81271 433 504 1.21E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 PANTHER PTHR21262:SF0 26 783 0.0 T 22-04-2016 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 Pfam PF04607 Region found in RelA / SpoT proteins 289 398 1.5E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 Pfam PF13291 ACT domain 704 780 1.2E-18 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 82 779 5.7E-252 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 SMART SM00471 97 207 6.1E-11 T 22-04-2016 IPR003607 HD/PDEase domain RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 SUPERFAMILY SSF55021 705 781 8.89E-16 T 22-04-2016 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 SUPERFAMILY SSF109604 60 244 3.36E-74 T 22-04-2016 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 SUPERFAMILY SSF81301 234 449 1.29E-62 T 22-04-2016 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 Pfam PF02824 TGS domain 445 504 1.8E-22 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 Gene3D G3DSA:3.30.460.10 231 378 8.4E-49 T 22-04-2016 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 Gene3D G3DSA:3.10.20.30 444 506 4.4E-23 T 22-04-2016 IPR012675 Beta-grasp domain RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 Gene3D G3DSA:3.30.70.260 705 778 2.0E-18 T 22-04-2016 RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 Pfam PF13328 HD domain 82 229 9.4E-50 T 22-04-2016 IPR003607 HD/PDEase domain RM25_RS05055 6991b4249349f2a2506ee5bf54365151 783 PANTHER PTHR21262 26 783 0.0 T 22-04-2016 RM25_RS12065 f11197dce97b1b4464d48f0c28a87165 95 PANTHER PTHR21240:SF9 1 86 3.6E-14 T 22-04-2016 RM25_RS12065 f11197dce97b1b4464d48f0c28a87165 95 PANTHER PTHR21240 1 86 3.6E-14 T 22-04-2016 RM25_RS12065 f11197dce97b1b4464d48f0c28a87165 95 SUPERFAMILY SSF51556 28 90 1.05E-7 T 22-04-2016 IPR032466 Metal-dependent hydrolase RM25_RS12065 f11197dce97b1b4464d48f0c28a87165 95 Gene3D G3DSA:3.20.20.140 9 92 2.0E-11 T 22-04-2016 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 PANTHER PTHR10169:SF48 8 801 0.0 T 22-04-2016 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 Gene3D G3DSA:3.30.1360.40 241 338 4.2E-33 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 SUPERFAMILY SSF101904 504 841 8.24E-93 T 22-04-2016 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 4 835 26.504 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 827 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 PANTHER PTHR10169 8 801 0.0 T 22-04-2016 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 Gene3D G3DSA:3.90.199.10 31 240 1.8E-109 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 Gene3D G3DSA:3.90.199.10 339 403 1.8E-109 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 Gene3D G3DSA:2.120.10.90 501 826 5.6E-109 T 22-04-2016 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 SUPERFAMILY SSF56719 31 493 9.94E-166 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 474 5.2E-144 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 615 660 1.6E-7 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 790 826 5.8E-4 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 732 778 5.4E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 559 603 1.0E-6 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 664 713 3.0E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 509 555 8.6E-15 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RM25_RS00075 323399fb9f4e2b776e7ec3d72e5a4f2b 882 SMART SM00434 12 470 1.3E-253 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RM25_RS00050 fd42a8dcee8df341a044432c4a68979a 162 PANTHER PTHR36456 35 162 2.8E-22 T 22-04-2016 RM25_RS00050 fd42a8dcee8df341a044432c4a68979a 162 Pfam PF05258 Protein of unknown function (DUF721) 51 136 4.6E-23 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 RM25_RS10100 474f01998152b2410be8270dc99c33ee 258 Pfam PF13531 Bacterial extracellular solute-binding protein 38 253 2.8E-37 T 22-04-2016 RM25_RS10100 474f01998152b2410be8270dc99c33ee 258 Gene3D G3DSA:3.40.190.10 167 252 2.7E-9 T 22-04-2016 RM25_RS10100 474f01998152b2410be8270dc99c33ee 258 Gene3D G3DSA:3.40.190.10 34 162 5.0E-35 T 22-04-2016 RM25_RS10100 474f01998152b2410be8270dc99c33ee 258 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 43 252 5.4E-38 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 RM25_RS10100 474f01998152b2410be8270dc99c33ee 258 PIRSF PIRSF004846 1 257 3.4E-59 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 RM25_RS10100 474f01998152b2410be8270dc99c33ee 258 PANTHER PTHR30632 13 253 2.4E-44 T 22-04-2016 RM25_RS10100 474f01998152b2410be8270dc99c33ee 258 PANTHER PTHR30632:SF0 13 253 2.4E-44 T 22-04-2016 RM25_RS10100 474f01998152b2410be8270dc99c33ee 258 SUPERFAMILY SSF53850 37 255 3.11E-48 T 22-04-2016 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 Pfam PF03129 Anticodon binding domain 368 457 4.6E-22 T 22-04-2016 IPR004154 Anticodon-binding RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 PANTHER PTHR10745 7 455 2.4E-203 T 22-04-2016 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 KEGG: 00970+6.1.1.14 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 SUPERFAMILY SSF52954 355 459 4.98E-33 T 22-04-2016 IPR004154 Anticodon-binding RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 159 276 7.0E-7 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 Gene3D G3DSA:3.40.50.800 364 458 3.5E-39 T 22-04-2016 IPR004154 Anticodon-binding RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 3 460 50.063 T 22-04-2016 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 6 232 2.1E-83 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 SUPERFAMILY SSF55681 5 371 1.07E-121 T 22-04-2016 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 Gene3D G3DSA:3.30.930.10 124 363 8.3E-147 T 22-04-2016 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 Gene3D G3DSA:3.30.930.10 7 91 8.3E-147 T 22-04-2016 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 139 151 6.4E-56 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 209 219 6.4E-56 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 160 177 6.4E-56 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 319 331 6.4E-56 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 25 39 6.4E-56 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 405 424 6.4E-56 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RM25_RS06185 a2f81a54ab2ea8b4b6c79328d4f38dcf 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 192 209 6.4E-56 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 826 1.4E-300 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 Gene3D G3DSA:2.20.25.90 28 90 1.2E-15 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 PANTHER PTHR11615 27 292 9.0E-240 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 PANTHER PTHR11615:SF128 449 826 9.0E-240 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 PANTHER PTHR11615:SF128 325 429 9.0E-240 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 Pfam PF00384 Molybdopterin oxidoreductase 89 569 1.9E-72 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 SMART SM00926 27 86 1.8E-9 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 Gene3D G3DSA:2.40.40.20 669 826 1.9E-49 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 Gene3D G3DSA:3.40.50.740 387 429 3.9E-64 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 Gene3D G3DSA:3.40.50.740 91 177 3.9E-64 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 Gene3D G3DSA:3.40.50.740 468 646 3.9E-64 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 PANTHER PTHR11615:SF128 27 292 9.0E-240 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 Pfam PF01568 Molydopterin dinucleotide binding domain 695 819 1.3E-25 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 511 528 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 PANTHER PTHR11615 449 826 9.0E-240 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 PANTHER PTHR11615 325 429 9.0E-240 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 SUPERFAMILY SSF53706 29 695 8.25E-161 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 730 757 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 32 50 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 Gene3D G3DSA:3.40.228.10 184 386 5.4E-70 T 22-04-2016 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 28 86 2.4E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RM25_RS09695 d8bdd71cde14be45298cadab725556d8 826 SUPERFAMILY SSF50692 689 826 1.02E-36 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 79 304 1.6E-31 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 Pfam PF04539 Sigma-70 region 3 162 237 1.6E-21 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 Pfam PF04542 Sigma-70 region 2 83 152 5.2E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 Pfam PF04545 Sigma-70, region 4 251 303 2.5E-12 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 SUPERFAMILY SSF88659 156 228 3.53E-19 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 Gene3D G3DSA:1.10.10.10 153 206 5.3E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 Gene3D G3DSA:1.10.10.10 246 306 4.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 Pfam PF00140 Sigma-70 factor, region 1.2 17 49 5.2E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 PRINTS PR00046 Major sigma-70 factor signature 255 267 9.9E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 PRINTS PR00046 Major sigma-70 factor signature 291 302 9.9E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 PRINTS PR00046 Major sigma-70 factor signature 131 139 9.9E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 PRINTS PR00046 Major sigma-70 factor signature 107 120 9.9E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 PRINTS PR00046 Major sigma-70 factor signature 276 291 9.9E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 SUPERFAMILY SSF88946 17 153 1.44E-45 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 PANTHER PTHR30603 17 303 7.1E-108 T 22-04-2016 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 PANTHER PTHR30603:SF0 17 303 7.1E-108 T 22-04-2016 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 Gene3D G3DSA:1.10.601.10 8 152 1.2E-53 T 22-04-2016 RM25_RS04450 19c77f0e374544d4c19ac1488a1774ac 309 SUPERFAMILY SSF88659 214 305 5.23E-23 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS08500 a2343acbbb5a5ac1aa88799e315ebdc5 135 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 51 3.6E-22 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RM25_RS08500 a2343acbbb5a5ac1aa88799e315ebdc5 135 PANTHER PTHR34404 2 87 3.0E-23 T 22-04-2016 RM25_RS08500 a2343acbbb5a5ac1aa88799e315ebdc5 135 PANTHER PTHR34404:SF2 2 87 3.0E-23 T 22-04-2016 RM25_RS08500 a2343acbbb5a5ac1aa88799e315ebdc5 135 Pfam PF09723 Zinc ribbon domain 1 40 1.1E-17 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RM25_RS08500 a2343acbbb5a5ac1aa88799e315ebdc5 135 SMART SM00834 1 41 3.0E-21 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RM25_RS07195 99831e29935f855141895b99e8479274 499 SUPERFAMILY SSF50800 70 164 2.09E-27 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain RM25_RS07195 99831e29935f855141895b99e8479274 499 Gene3D G3DSA:3.40.1380.20 323 467 1.1E-36 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 Pfam PF00224 Pyruvate kinase, barrel domain 2 333 2.4E-129 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 Pfam PF02887 Pyruvate kinase, alpha/beta domain 354 465 5.0E-25 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 PANTHER PTHR11817 1 485 2.3E-205 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 466 3.2E-162 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 SUPERFAMILY SSF52935 321 467 2.09E-33 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 SUPERFAMILY SSF51621 154 335 1.71E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RM25_RS07195 99831e29935f855141895b99e8479274 499 SUPERFAMILY SSF51621 2 74 1.71E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RM25_RS07195 99831e29935f855141895b99e8479274 499 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.8E-67 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 PRINTS PR01050 Pyruvate kinase family signature 214 240 1.8E-67 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 PRINTS PR01050 Pyruvate kinase family signature 310 326 1.8E-67 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 PRINTS PR01050 Pyruvate kinase family signature 241 265 1.8E-67 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 PRINTS PR01050 Pyruvate kinase family signature 266 290 1.8E-67 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 PRINTS PR01050 Pyruvate kinase family signature 184 198 1.8E-67 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 PRINTS PR01050 Pyruvate kinase family signature 291 309 1.8E-67 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 Gene3D G3DSA:2.40.33.10 73 166 2.5E-31 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07195 99831e29935f855141895b99e8479274 499 Gene3D G3DSA:3.20.20.60 2 72 1.3E-102 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RM25_RS07195 99831e29935f855141895b99e8479274 499 Gene3D G3DSA:3.20.20.60 167 322 1.3E-102 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RM25_RS07195 99831e29935f855141895b99e8479274 499 ProSitePatterns PS00110 Pyruvate kinase active site signature. 212 224 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 Gene3D G3DSA:2.60.40.420 370 492 2.6E-42 T 22-04-2016 IPR008972 Cupredoxin RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 Pfam PF00394 Multicopper oxidase 184 338 4.7E-18 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 Gene3D G3DSA:2.60.40.420 179 356 8.1E-40 T 22-04-2016 IPR008972 Cupredoxin RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 PANTHER PTHR11709 48 215 1.7E-77 T 22-04-2016 RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 PANTHER PTHR11709 241 491 1.7E-77 T 22-04-2016 RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 ProSitePatterns PS00080 Multicopper oxidases signature 2. 475 486 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 Gene3D G3DSA:2.60.40.420 49 177 3.2E-28 T 22-04-2016 IPR008972 Cupredoxin RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 ProSitePatterns PS00079 Multicopper oxidases signature 1. 470 490 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 Pfam PF07732 Multicopper oxidase 71 175 6.5E-26 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 SUPERFAMILY SSF49503 177 355 1.25E-28 T 22-04-2016 IPR008972 Cupredoxin RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 Pfam PF07731 Multicopper oxidase 383 490 2.2E-25 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 PANTHER PTHR11709:SF33 48 215 1.7E-77 T 22-04-2016 RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 PANTHER PTHR11709:SF33 241 491 1.7E-77 T 22-04-2016 RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 SUPERFAMILY SSF49503 375 489 5.96E-34 T 22-04-2016 IPR008972 Cupredoxin RM25_RS11285 517a67bbf90f4c8f3d09f39b1439f189 492 SUPERFAMILY SSF49503 45 192 2.9E-31 T 22-04-2016 IPR008972 Cupredoxin RM25_RS03610 db4cba6d7b0eff52995a49172598401a 379 PANTHER PTHR35863 11 378 5.1E-91 T 22-04-2016 RM25_RS03610 db4cba6d7b0eff52995a49172598401a 379 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 22 372 26.494 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 RM25_RS03610 db4cba6d7b0eff52995a49172598401a 379 PANTHER PTHR35863:SF1 11 378 5.1E-91 T 22-04-2016 RM25_RS03610 db4cba6d7b0eff52995a49172598401a 379 PIRSF PIRSF026782 18 379 5.0E-139 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 RM25_RS03610 db4cba6d7b0eff52995a49172598401a 379 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 29 333 1.0E-49 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 RM25_RS03610 db4cba6d7b0eff52995a49172598401a 379 Gene3D G3DSA:3.30.2110.10 25 199 2.7E-53 T 22-04-2016 RM25_RS03610 db4cba6d7b0eff52995a49172598401a 379 SUPERFAMILY SSF111342 11 299 2.09E-82 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 RM25_RS03610 db4cba6d7b0eff52995a49172598401a 379 Pfam PF01888 CbiD 22 282 3.1E-80 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 ProSitePatterns PS00217 Sugar transport proteins signature 2. 138 163 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 PANTHER PTHR23500:SF141 1 196 6.7E-137 T 22-04-2016 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 PANTHER PTHR23500:SF141 250 542 6.7E-137 T 22-04-2016 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 PRINTS PR00171 Sugar transporter signature 45 55 1.1E-17 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 PRINTS PR00171 Sugar transporter signature 348 358 1.1E-17 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 PRINTS PR00171 Sugar transporter signature 133 152 1.1E-17 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 PRINTS PR00171 Sugar transporter signature 446 467 1.1E-17 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 PRINTS PR00171 Sugar transporter signature 469 481 1.1E-17 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 ProSitePatterns PS00216 Sugar transport proteins signature 1. 96 113 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 Gene3D G3DSA:1.20.1250.20 39 191 2.3E-31 T 22-04-2016 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 Gene3D G3DSA:1.20.1250.20 339 540 4.1E-20 T 22-04-2016 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 Gene3D G3DSA:1.20.1250.20 249 282 2.3E-31 T 22-04-2016 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 SUPERFAMILY SSF103473 246 542 3.4E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 SUPERFAMILY SSF103473 27 189 3.4E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 Pfam PF00083 Sugar (and other) transporter 237 543 1.8E-62 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 Pfam PF00083 Sugar (and other) transporter 38 192 3.5E-40 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 PANTHER PTHR23500 1 196 6.7E-137 T 22-04-2016 RM25_RS00180 d7bf101c682ccfd4bbf6dfd7f9acc6fe 550 PANTHER PTHR23500 250 542 6.7E-137 T 22-04-2016 RM25_RS01265 66bd5e3386e4d66da1b44247d7153d83 283 Pfam PF00459 Inositol monophosphatase family 8 280 1.9E-52 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS01265 66bd5e3386e4d66da1b44247d7153d83 283 PANTHER PTHR20854 1 277 1.6E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS01265 66bd5e3386e4d66da1b44247d7153d83 283 PANTHER PTHR20854:SF4 1 277 1.6E-60 T 22-04-2016 RM25_RS01265 66bd5e3386e4d66da1b44247d7153d83 283 Gene3D G3DSA:3.40.190.80 188 276 1.2E-24 T 22-04-2016 RM25_RS01265 66bd5e3386e4d66da1b44247d7153d83 283 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 8.3E-7 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS01265 66bd5e3386e4d66da1b44247d7153d83 283 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 8.3E-7 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS01265 66bd5e3386e4d66da1b44247d7153d83 283 SUPERFAMILY SSF56655 7 277 1.44E-62 T 22-04-2016 RM25_RS01265 66bd5e3386e4d66da1b44247d7153d83 283 Gene3D G3DSA:3.30.540.10 6 140 1.7E-40 T 22-04-2016 RM25_RS09700 e08aea6fc6c063653fa31ed764fe96e1 403 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 231 242 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS09700 e08aea6fc6c063653fa31ed764fe96e1 403 Pfam PF12838 4Fe-4S dicluster domain 231 280 2.5E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RM25_RS09700 e08aea6fc6c063653fa31ed764fe96e1 403 Gene3D G3DSA:3.30.70.20 218 283 2.4E-10 T 22-04-2016 RM25_RS09700 e08aea6fc6c063653fa31ed764fe96e1 403 SUPERFAMILY SSF54862 197 282 2.51E-12 T 22-04-2016 RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 PANTHER PTHR21089:SF3 272 356 1.5E-29 T 22-04-2016 RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 178 304 3.9E-9 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 317 412 7.8E-10 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 PANTHER PTHR21089 90 254 1.5E-29 T 22-04-2016 RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 413 18.327 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 SUPERFAMILY SSF51735 176 306 1.34E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 SUPERFAMILY SSF69742 3 157 6.28E-28 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 PIRSF PIRSF000445 1 417 7.2E-77 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 PANTHER PTHR21089 272 356 1.5E-29 T 22-04-2016 RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 5.3E-28 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 Gene3D G3DSA:3.40.50.720 171 304 2.5E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 SUPERFAMILY SSF69075 315 406 3.66E-7 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RM25_RS08900 d634b31f132e7f29a8d1fa4a248dfb86 417 PANTHER PTHR21089:SF3 90 254 1.5E-29 T 22-04-2016 RM25_RS05990 e750c7fbca8b03ae2cd40d796981569e 228 Gene3D G3DSA:3.40.50.300 1 221 4.0E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05990 e750c7fbca8b03ae2cd40d796981569e 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 215 6.2E-85 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 RM25_RS05990 e750c7fbca8b03ae2cd40d796981569e 228 Pfam PF00005 ABC transporter 19 166 3.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS05990 e750c7fbca8b03ae2cd40d796981569e 228 SUPERFAMILY SSF52540 1 221 6.65E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05990 e750c7fbca8b03ae2cd40d796981569e 228 SMART SM00382 28 215 3.8E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS05990 e750c7fbca8b03ae2cd40d796981569e 228 PANTHER PTHR24220:SF470 3 220 2.7E-114 T 22-04-2016 RM25_RS05990 e750c7fbca8b03ae2cd40d796981569e 228 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS05990 e750c7fbca8b03ae2cd40d796981569e 228 PANTHER PTHR24220 3 220 2.7E-114 T 22-04-2016 RM25_RS05070 15161677fc8448c58c76ff100191f875 443 SUPERFAMILY SSF52954 350 422 5.44E-12 T 22-04-2016 IPR004154 Anticodon-binding RM25_RS05070 15161677fc8448c58c76ff100191f875 443 Pfam PF03129 Anticodon binding domain 351 403 8.5E-8 T 22-04-2016 IPR004154 Anticodon-binding RM25_RS05070 15161677fc8448c58c76ff100191f875 443 SUPERFAMILY SSF55681 5 337 1.47E-59 T 22-04-2016 RM25_RS05070 15161677fc8448c58c76ff100191f875 443 Pfam PF13393 Histidyl-tRNA synthetase 9 332 1.2E-27 T 22-04-2016 RM25_RS05070 15161677fc8448c58c76ff100191f875 443 PANTHER PTHR11476:SF1 1 408 2.4E-107 T 22-04-2016 RM25_RS05070 15161677fc8448c58c76ff100191f875 443 PIRSF PIRSF001549 1 426 6.8E-86 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RM25_RS05070 15161677fc8448c58c76ff100191f875 443 Gene3D G3DSA:3.40.50.800 350 408 6.0E-13 T 22-04-2016 IPR004154 Anticodon-binding RM25_RS05070 15161677fc8448c58c76ff100191f875 443 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 5.8E-97 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RM25_RS05070 15161677fc8448c58c76ff100191f875 443 PANTHER PTHR11476 1 408 2.4E-107 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RM25_RS05070 15161677fc8448c58c76ff100191f875 443 Gene3D G3DSA:3.30.930.10 3 199 9.2E-72 T 22-04-2016 RM25_RS05070 15161677fc8448c58c76ff100191f875 443 Gene3D G3DSA:3.30.930.10 252 341 9.2E-72 T 22-04-2016 RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 Pfam PF00270 DEAD/DEAH box helicase 27 165 2.0E-7 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 PIRSF PIRSF005496 6 869 4.2E-222 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 Gene3D G3DSA:3.40.50.300 11 166 6.5E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 Pfam PF04408 Helicase associated domain (HA2) 413 474 1.0E-9 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 Pfam PF08482 ATP-dependent helicase C-terminal 736 855 2.3E-42 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 SMART SM00487 8 194 4.0E-16 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 124 133 - T 22-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 SMART SM00847 412 504 2.4E-9 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 Gene3D G3DSA:3.40.50.300 230 364 1.3E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 SMART SM00490 250 352 4.1E-12 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 PANTHER PTHR18934 31 453 2.4E-110 T 22-04-2016 RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 11 864 3.9E-184 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 SUPERFAMILY SSF52540 204 361 2.19E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 SUPERFAMILY SSF52540 30 167 2.19E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02050 4441d0209116747f000b31117d99e7e9 869 Pfam PF00271 Helicase conserved C-terminal domain 238 352 8.8E-11 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS01840 08e0d8258820f4a48f7ac2b49cebd093 292 Pfam PF01259 SAICAR synthetase 13 258 3.9E-97 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RM25_RS01840 08e0d8258820f4a48f7ac2b49cebd093 292 Gene3D G3DSA:3.30.200.20 8 109 4.1E-41 T 22-04-2016 RM25_RS01840 08e0d8258820f4a48f7ac2b49cebd093 292 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 11 287 25.954 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RM25_RS01840 08e0d8258820f4a48f7ac2b49cebd093 292 PANTHER PTHR11609 9 287 2.7E-103 T 22-04-2016 RM25_RS01840 08e0d8258820f4a48f7ac2b49cebd093 292 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 14 287 4.1E-64 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RM25_RS01840 08e0d8258820f4a48f7ac2b49cebd093 292 ProSitePatterns PS01057 SAICAR synthetase signature 1. 98 112 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RM25_RS01840 08e0d8258820f4a48f7ac2b49cebd093 292 SUPERFAMILY SSF56104 8 288 2.35E-95 T 22-04-2016 RM25_RS01840 08e0d8258820f4a48f7ac2b49cebd093 292 PANTHER PTHR11609:SF6 9 287 2.7E-103 T 22-04-2016 RM25_RS01840 08e0d8258820f4a48f7ac2b49cebd093 292 ProSitePatterns PS01058 SAICAR synthetase signature 2. 197 205 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RM25_RS01840 08e0d8258820f4a48f7ac2b49cebd093 292 Gene3D G3DSA:3.30.470.20 110 236 3.3E-53 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RM25_RS03695 66865678725fc5a11af65894e3d18dc9 421 Gene3D G3DSA:1.20.1250.20 8 187 2.5E-25 T 22-04-2016 RM25_RS03695 66865678725fc5a11af65894e3d18dc9 421 Gene3D G3DSA:1.20.1250.20 214 392 1.4E-19 T 22-04-2016 RM25_RS03695 66865678725fc5a11af65894e3d18dc9 421 Pfam PF07690 Major Facilitator Superfamily 18 333 4.7E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS03695 66865678725fc5a11af65894e3d18dc9 421 SUPERFAMILY SSF103473 3 393 4.19E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS03695 66865678725fc5a11af65894e3d18dc9 421 PANTHER PTHR23518 18 406 1.7E-24 T 22-04-2016 RM25_RS00485 62b49e3624b0903ad473519ec984bdac 267 Pfam PF01261 Xylose isomerase-like TIM barrel 18 225 1.6E-24 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS00485 62b49e3624b0903ad473519ec984bdac 267 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 170 177 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 RM25_RS00485 62b49e3624b0903ad473519ec984bdac 267 PANTHER PTHR21445 1 267 5.4E-44 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 RM25_RS00485 62b49e3624b0903ad473519ec984bdac 267 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 202 218 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 RM25_RS00485 62b49e3624b0903ad473519ec984bdac 267 Gene3D G3DSA:3.20.20.150 4 264 8.6E-57 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS00485 62b49e3624b0903ad473519ec984bdac 267 SUPERFAMILY SSF51658 4 264 2.36E-52 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS00485 62b49e3624b0903ad473519ec984bdac 267 SMART SM00518 4 264 2.5E-49 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 RM25_RS06370 7da8c6e8c9a646982f8c761b1dc18b4f 319 Gene3D G3DSA:3.40.50.620 190 239 7.5E-39 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS06370 7da8c6e8c9a646982f8c761b1dc18b4f 319 Gene3D G3DSA:3.40.50.620 18 82 7.5E-39 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS06370 7da8c6e8c9a646982f8c761b1dc18b4f 319 PRINTS PR00987 Glutamyl-tRNA synthetase signature 48 61 1.2E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS06370 7da8c6e8c9a646982f8c761b1dc18b4f 319 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 31 1.2E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS06370 7da8c6e8c9a646982f8c761b1dc18b4f 319 PRINTS PR00987 Glutamyl-tRNA synthetase signature 188 198 1.2E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS06370 7da8c6e8c9a646982f8c761b1dc18b4f 319 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 44 1.2E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS06370 7da8c6e8c9a646982f8c761b1dc18b4f 319 PANTHER PTHR11451:SF35 18 239 3.3E-61 T 22-04-2016 RM25_RS06370 7da8c6e8c9a646982f8c761b1dc18b4f 319 SUPERFAMILY SSF52374 18 273 1.05E-67 T 22-04-2016 RM25_RS06370 7da8c6e8c9a646982f8c761b1dc18b4f 319 Gene3D G3DSA:3.90.800.10 83 188 5.0E-20 T 22-04-2016 RM25_RS06370 7da8c6e8c9a646982f8c761b1dc18b4f 319 PANTHER PTHR11451 18 239 3.3E-61 T 22-04-2016 RM25_RS06370 7da8c6e8c9a646982f8c761b1dc18b4f 319 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 19 262 1.6E-42 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS05015 1caae303198327a2f275e02d5beff9ec 266 Gene3D G3DSA:3.30.1270.10 226 259 3.7E-34 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RM25_RS05015 1caae303198327a2f275e02d5beff9ec 266 Gene3D G3DSA:3.30.1270.10 83 137 3.7E-34 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RM25_RS05015 1caae303198327a2f275e02d5beff9ec 266 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 253 33.72 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RM25_RS05015 1caae303198327a2f275e02d5beff9ec 266 Gene3D G3DSA:3.30.70.980 138 217 1.9E-23 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 RM25_RS05015 1caae303198327a2f275e02d5beff9ec 266 Pfam PF01709 Transcriptional regulator 5 251 2.7E-84 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RM25_RS05015 1caae303198327a2f275e02d5beff9ec 266 Gene3D G3DSA:1.10.10.200 1 79 2.9E-32 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like RM25_RS05015 1caae303198327a2f275e02d5beff9ec 266 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 252 1.6E-87 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RM25_RS05015 1caae303198327a2f275e02d5beff9ec 266 PANTHER PTHR12532 1 255 9.2E-97 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RM25_RS05015 1caae303198327a2f275e02d5beff9ec 266 SUPERFAMILY SSF75625 3 258 2.49E-83 T 22-04-2016 IPR029072 YebC-like RM25_RS10145 54ad67b97ef18f35c0c8728ac338569b 211 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 31 181 2.9E-34 T 22-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 RM25_RS10145 54ad67b97ef18f35c0c8728ac338569b 211 PANTHER PTHR30598:SF1 7 211 9.0E-45 T 22-04-2016 RM25_RS10145 54ad67b97ef18f35c0c8728ac338569b 211 SUPERFAMILY SSF89155 24 185 1.96E-24 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RM25_RS10145 54ad67b97ef18f35c0c8728ac338569b 211 PANTHER PTHR30598 7 211 9.0E-45 T 22-04-2016 RM25_RS10145 54ad67b97ef18f35c0c8728ac338569b 211 Pfam PF02613 Nitrate reductase delta subunit 54 176 5.0E-13 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RM25_RS10145 54ad67b97ef18f35c0c8728ac338569b 211 Gene3D G3DSA:1.10.3480.10 25 142 7.4E-5 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RM25_RS10825 3ee9951bc619abf73d9d1f5b36beba84 419 Gene3D G3DSA:1.20.1250.20 35 212 3.6E-16 T 22-04-2016 RM25_RS10825 3ee9951bc619abf73d9d1f5b36beba84 419 Gene3D G3DSA:1.20.1250.20 235 414 2.6E-11 T 22-04-2016 RM25_RS10825 3ee9951bc619abf73d9d1f5b36beba84 419 SUPERFAMILY SSF103473 15 414 2.62E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS10825 3ee9951bc619abf73d9d1f5b36beba84 419 PANTHER PTHR23514 24 411 5.1E-67 T 22-04-2016 RM25_RS10825 3ee9951bc619abf73d9d1f5b36beba84 419 PANTHER PTHR23514:SF13 24 411 5.1E-67 T 22-04-2016 RM25_RS09045 0319863ae67b626776ec214a649fb8b1 551 PIRSF PIRSF006060 2 500 6.3E-49 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS09045 0319863ae67b626776ec214a649fb8b1 551 PANTHER PTHR11785 60 419 1.8E-30 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS09045 0319863ae67b626776ec214a649fb8b1 551 PANTHER PTHR11785 498 511 1.8E-30 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS09045 0319863ae67b626776ec214a649fb8b1 551 Pfam PF13520 Amino acid permease 38 452 3.5E-27 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS09440 3b2a1854647263b4195aae319b35a73f 499 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 182 4.1E-13 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS09440 3b2a1854647263b4195aae319b35a73f 499 SUPERFAMILY SSF53790 1 223 7.56E-18 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS09440 3b2a1854647263b4195aae319b35a73f 499 Gene3D G3DSA:3.30.950.10 140 224 1.7E-5 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RM25_RS09440 3b2a1854647263b4195aae319b35a73f 499 SUPERFAMILY SSF69618 220 468 4.05E-58 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS09440 3b2a1854647263b4195aae319b35a73f 499 Gene3D G3DSA:3.40.1010.10 1 95 1.8E-9 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RM25_RS09440 3b2a1854647263b4195aae319b35a73f 499 PANTHER PTHR38042:SF1 217 477 1.5E-20 T 22-04-2016 RM25_RS09440 3b2a1854647263b4195aae319b35a73f 499 Gene3D G3DSA:3.40.50.10090 225 347 2.3E-33 T 22-04-2016 RM25_RS09440 3b2a1854647263b4195aae319b35a73f 499 Gene3D G3DSA:3.40.50.10090 355 468 6.7E-29 T 22-04-2016 RM25_RS09440 3b2a1854647263b4195aae319b35a73f 499 Pfam PF02602 Uroporphyrinogen-III synthase HemD 234 460 6.5E-57 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS09440 3b2a1854647263b4195aae319b35a73f 499 PANTHER PTHR38042 217 477 1.5E-20 T 22-04-2016 RM25_RS00925 8c6d708da88ac62db1a34e6192a2b44e 329 Gene3D G3DSA:3.20.20.70 1 290 1.3E-46 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS00925 8c6d708da88ac62db1a34e6192a2b44e 329 PANTHER PTHR11938 97 321 1.1E-43 T 22-04-2016 RM25_RS00925 8c6d708da88ac62db1a34e6192a2b44e 329 PANTHER PTHR11938:SF103 97 321 1.1E-43 T 22-04-2016 RM25_RS00925 8c6d708da88ac62db1a34e6192a2b44e 329 SUPERFAMILY SSF51395 1 291 4.66E-48 T 22-04-2016 RM25_RS00925 8c6d708da88ac62db1a34e6192a2b44e 329 PIRSF PIRSF000164 1 301 1.8E-29 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 RM25_RS00925 8c6d708da88ac62db1a34e6192a2b44e 329 Pfam PF01180 Dihydroorotate dehydrogenase 2 286 2.5E-11 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RM25_RS07920 9010167c36f78c7926df5d8cd21c3af4 329 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 12 295 37.186 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RM25_RS07920 9010167c36f78c7926df5d8cd21c3af4 329 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 14 293 3.2E-97 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RM25_RS07920 9010167c36f78c7926df5d8cd21c3af4 329 Pfam PF02401 LytB protein 14 291 5.3E-90 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RM25_RS07920 9010167c36f78c7926df5d8cd21c3af4 329 PANTHER PTHR30426 11 322 1.9E-146 T 22-04-2016 RM25_RS09760 ebcbb2d8b1de6cf54450647cd46a4bf2 407 PANTHER PTHR30341 1 407 1.4E-126 T 22-04-2016 RM25_RS09760 ebcbb2d8b1de6cf54450647cd46a4bf2 407 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 29 403 19.099 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RM25_RS09760 ebcbb2d8b1de6cf54450647cd46a4bf2 407 Gene3D G3DSA:1.20.1530.10 29 400 4.7E-124 T 22-04-2016 IPR023171 Na/H antiporter domain RM25_RS09760 ebcbb2d8b1de6cf54450647cd46a4bf2 407 PANTHER PTHR30341:SF0 1 407 1.4E-126 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RM25_RS09760 ebcbb2d8b1de6cf54450647cd46a4bf2 407 Pfam PF06965 Na+/H+ antiporter 1 32 395 2.4E-120 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RM25_RS09760 ebcbb2d8b1de6cf54450647cd46a4bf2 407 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 35 394 1.7E-82 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RM25_RS10235 36183a0e15ad0f6b95e757453ba6865e 348 SMART SM00829 8 344 0.0014 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RM25_RS10235 36183a0e15ad0f6b95e757453ba6865e 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 128 2.7E-22 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RM25_RS10235 36183a0e15ad0f6b95e757453ba6865e 348 Gene3D G3DSA:3.40.50.720 173 291 1.2E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10235 36183a0e15ad0f6b95e757453ba6865e 348 PANTHER PTHR11695:SF601 12 346 2.2E-86 T 22-04-2016 RM25_RS10235 36183a0e15ad0f6b95e757453ba6865e 348 Pfam PF00107 Zinc-binding dehydrogenase 180 306 2.1E-23 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RM25_RS10235 36183a0e15ad0f6b95e757453ba6865e 348 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 22 8.3E-7 T 22-04-2016 IPR027399 Alcohol dehydrogenase GroES-associated RM25_RS10235 36183a0e15ad0f6b95e757453ba6865e 348 SUPERFAMILY SSF50129 1 170 1.16E-44 T 22-04-2016 IPR011032 GroES-like RM25_RS10235 36183a0e15ad0f6b95e757453ba6865e 348 Gene3D G3DSA:3.90.180.10 1 172 3.1E-36 T 22-04-2016 IPR011032 GroES-like RM25_RS10235 36183a0e15ad0f6b95e757453ba6865e 348 PANTHER PTHR11695 12 346 2.2E-86 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RM25_RS10235 36183a0e15ad0f6b95e757453ba6865e 348 SUPERFAMILY SSF51735 147 310 1.21E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01800 812cb0accfdf4946e2a6c77740b91dc4 587 PANTHER PTHR23513 2 398 7.8E-96 T 22-04-2016 RM25_RS01800 812cb0accfdf4946e2a6c77740b91dc4 587 Gene3D G3DSA:1.20.1250.20 229 403 3.4E-14 T 22-04-2016 RM25_RS01800 812cb0accfdf4946e2a6c77740b91dc4 587 Gene3D G3DSA:1.20.1250.20 17 206 3.8E-22 T 22-04-2016 RM25_RS01800 812cb0accfdf4946e2a6c77740b91dc4 587 Pfam PF05977 Transmembrane secretion effector 8 523 1.7E-134 T 22-04-2016 IPR010290 Transmembrane secretion effector RM25_RS01800 812cb0accfdf4946e2a6c77740b91dc4 587 PANTHER PTHR23513:SF7 2 398 7.8E-96 T 22-04-2016 RM25_RS01800 812cb0accfdf4946e2a6c77740b91dc4 587 SUPERFAMILY SSF103473 17 403 6.54E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS10630 0d3114a4f6f1a65716da77070789e9aa 448 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 59 101 3.9E-7 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS10630 0d3114a4f6f1a65716da77070789e9aa 448 PANTHER PTHR33498 59 447 1.6E-26 T 22-04-2016 RM25_RS10630 0d3114a4f6f1a65716da77070789e9aa 448 Pfam PF01610 Transposase 177 432 1.6E-64 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS10630 0d3114a4f6f1a65716da77070789e9aa 448 PANTHER PTHR33498:SF1 59 447 1.6E-26 T 22-04-2016 RM25_RS10535 0d3114a4f6f1a65716da77070789e9aa 448 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 59 101 3.9E-7 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS10535 0d3114a4f6f1a65716da77070789e9aa 448 PANTHER PTHR33498 59 447 1.6E-26 T 22-04-2016 RM25_RS10535 0d3114a4f6f1a65716da77070789e9aa 448 Pfam PF01610 Transposase 177 432 1.6E-64 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS10535 0d3114a4f6f1a65716da77070789e9aa 448 PANTHER PTHR33498:SF1 59 447 1.6E-26 T 22-04-2016 RM25_RS10585 0d3114a4f6f1a65716da77070789e9aa 448 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 59 101 3.9E-7 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS10585 0d3114a4f6f1a65716da77070789e9aa 448 PANTHER PTHR33498 59 447 1.6E-26 T 22-04-2016 RM25_RS10585 0d3114a4f6f1a65716da77070789e9aa 448 Pfam PF01610 Transposase 177 432 1.6E-64 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS10585 0d3114a4f6f1a65716da77070789e9aa 448 PANTHER PTHR33498:SF1 59 447 1.6E-26 T 22-04-2016 RM25_RS05765 815fdbe4fd97925bffeda64b9a33d445 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 309 1.4E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS05765 815fdbe4fd97925bffeda64b9a33d445 317 PANTHER PTHR30465 1 310 5.1E-92 T 22-04-2016 RM25_RS05765 815fdbe4fd97925bffeda64b9a33d445 317 PANTHER PTHR30465:SF24 1 310 5.1E-92 T 22-04-2016 RM25_RS05765 815fdbe4fd97925bffeda64b9a33d445 317 Gene3D G3DSA:1.10.3720.10 88 306 2.0E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS05765 815fdbe4fd97925bffeda64b9a33d445 317 SUPERFAMILY SSF161098 90 292 3.05E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS03210 59d3acfc3a1a0c7547c1682de1b58da7 319 Gene3D G3DSA:3.40.50.2300 123 282 1.5E-21 T 22-04-2016 RM25_RS03210 59d3acfc3a1a0c7547c1682de1b58da7 319 Gene3D G3DSA:3.40.50.2300 2 122 8.1E-23 T 22-04-2016 RM25_RS03210 59d3acfc3a1a0c7547c1682de1b58da7 319 PANTHER PTHR34296 11 164 8.9E-23 T 22-04-2016 RM25_RS03210 59d3acfc3a1a0c7547c1682de1b58da7 319 PANTHER PTHR34296 180 312 8.9E-23 T 22-04-2016 RM25_RS03210 59d3acfc3a1a0c7547c1682de1b58da7 319 Pfam PF02608 Basic membrane protein 11 259 2.7E-25 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 Gene3D G3DSA:3.40.50.300 224 360 1.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 PANTHER PTHR18934 444 515 1.0E-287 T 22-04-2016 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 PANTHER PTHR18934 19 418 1.0E-287 T 22-04-2016 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 PANTHER PTHR18934 756 887 1.0E-287 T 22-04-2016 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 PANTHER PTHR18934 554 719 1.0E-287 T 22-04-2016 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 Pfam PF04408 Helicase associated domain (HA2) 409 504 4.1E-13 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 SMART SM00847 407 526 7.6E-24 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 SUPERFAMILY SSF52540 20 514 1.87E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 Gene3D G3DSA:3.40.50.300 19 172 3.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 Pfam PF00271 Helicase conserved C-terminal domain 231 346 9.8E-9 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 SMART SM00490 247 347 2.1E-11 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 Pfam PF11898 Domain of unknown function (DUF3418) 730 1315 5.4E-192 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 8 512 1.8E-239 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 607 714 4.1E-11 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 SMART SM00382 34 327 0.001 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 Pfam PF00270 DEAD/DEAH box helicase 31 172 2.3E-6 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 PANTHER PTHR18934:SF109 444 515 1.0E-287 T 22-04-2016 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 PANTHER PTHR18934:SF109 19 418 1.0E-287 T 22-04-2016 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 PANTHER PTHR18934:SF109 756 887 1.0E-287 T 22-04-2016 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 PANTHER PTHR18934:SF109 554 719 1.0E-287 T 22-04-2016 RM25_RS04430 f359ec8f77aec024c6640dd3e87cf0aa 1322 SMART SM00487 17 203 3.9E-25 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS01125 37e6a9b43afa6bbbff7659e2f124389d 434 SUPERFAMILY SSF54373 183 283 1.06E-16 T 22-04-2016 RM25_RS01125 37e6a9b43afa6bbbff7659e2f124389d 434 Pfam PF01494 FAD binding domain 10 195 1.3E-12 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RM25_RS01125 37e6a9b43afa6bbbff7659e2f124389d 434 Gene3D G3DSA:3.50.50.60 9 248 9.6E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS01125 37e6a9b43afa6bbbff7659e2f124389d 434 PANTHER PTHR10617:SF98 5 415 4.6E-106 T 22-04-2016 RM25_RS01125 37e6a9b43afa6bbbff7659e2f124389d 434 SUPERFAMILY SSF51905 8 183 2.8E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS01125 37e6a9b43afa6bbbff7659e2f124389d 434 SUPERFAMILY SSF51905 285 374 2.8E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS01125 37e6a9b43afa6bbbff7659e2f124389d 434 PANTHER PTHR10617 5 415 4.6E-106 T 22-04-2016 RM25_RS01125 37e6a9b43afa6bbbff7659e2f124389d 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.2E-7 T 22-04-2016 RM25_RS01125 37e6a9b43afa6bbbff7659e2f124389d 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 1.2E-7 T 22-04-2016 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 SUPERFAMILY SSF50249 28 128 7.46E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 Gene3D G3DSA:2.40.50.140 21 108 4.9E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 Gene3D G3DSA:2.40.50.140 282 366 7.5E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 PANTHER PTHR10724 19 367 2.3E-123 T 22-04-2016 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 PRINTS PR00681 Ribosomal protein S1 signature 307 326 8.2E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 PRINTS PR00681 Ribosomal protein S1 signature 229 250 8.2E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 PRINTS PR00681 Ribosomal protein S1 signature 143 160 8.2E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 PRINTS PR00681 Ribosomal protein S1 signature 172 192 8.2E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 PRINTS PR00681 Ribosomal protein S1 signature 126 142 8.2E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 PRINTS PR00681 Ribosomal protein S1 signature 346 364 8.2E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 PRINTS PR00681 Ribosomal protein S1 signature 102 121 8.2E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 PRINTS PR00681 Ribosomal protein S1 signature 54 68 8.2E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 PRINTS PR00681 Ribosomal protein S1 signature 36 54 8.2E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 PANTHER PTHR10724:SF6 19 367 2.3E-123 T 22-04-2016 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 SUPERFAMILY SSF50249 196 301 6.74E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 SUPERFAMILY SSF50249 277 365 1.53E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 Pfam PF00575 S1 RNA binding domain 206 277 2.6E-25 T 22-04-2016 IPR003029 S1 domain GO:0003676 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 Pfam PF00575 S1 RNA binding domain 33 105 8.9E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 Pfam PF00575 S1 RNA binding domain 121 188 2.3E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 Pfam PF00575 S1 RNA binding domain 291 363 1.4E-23 T 22-04-2016 IPR003029 S1 domain GO:0003676 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 Gene3D G3DSA:2.40.50.140 113 189 1.7E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 SMART SM00316 121 188 3.3E-12 T 22-04-2016 IPR022967 RNA-binding domain, S1 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 SMART SM00316 34 105 5.5E-16 T 22-04-2016 IPR022967 RNA-binding domain, S1 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 SMART SM00316 207 277 9.8E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 SMART SM00316 292 363 8.5E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 SUPERFAMILY SSF50249 108 191 6.19E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS07165 396b07aa55990a410236502dd81c8ae4 484 Gene3D G3DSA:2.40.50.140 201 281 9.9E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 PRINTS PR01181 Diaminopimelate decarboxylase signature 199 208 1.2E-23 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 PRINTS PR01181 Diaminopimelate decarboxylase signature 110 127 1.2E-23 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 PRINTS PR01181 Diaminopimelate decarboxylase signature 432 454 1.2E-23 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 PRINTS PR01181 Diaminopimelate decarboxylase signature 349 367 1.2E-23 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 SUPERFAMILY SSF51419 63 327 2.62E-70 T 22-04-2016 IPR029066 PLP-binding barrel RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 Gene3D G3DSA:3.20.20.10 71 313 4.9E-84 T 22-04-2016 IPR029066 PLP-binding barrel RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 71 326 9.4E-57 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 227 240 2.3E-16 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 422 435 2.3E-16 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 316 335 2.3E-16 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 92 110 2.3E-16 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 112 124 2.3E-16 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 42 464 2.4E-127 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 SUPERFAMILY SSF50621 301 465 1.8E-45 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 339 441 7.4E-14 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 52 465 37.318 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 Gene3D G3DSA:2.40.37.10 314 465 3.5E-44 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 PANTHER PTHR11482 36 461 1.1E-138 T 22-04-2016 RM25_RS05650 b7af1e7eb859b7abfe06f6578f5824fb 467 PANTHER PTHR11482:SF5 36 461 1.1E-138 T 22-04-2016 RM25_RS05000 fcb76651d4bdce0fde1968a7fb1d2449 215 Gene3D G3DSA:3.40.50.880 10 211 5.2E-72 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS05000 fcb76651d4bdce0fde1968a7fb1d2449 215 PANTHER PTHR21235 9 215 3.6E-70 T 22-04-2016 RM25_RS05000 fcb76651d4bdce0fde1968a7fb1d2449 215 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 13 210 1.2E-58 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RM25_RS05000 fcb76651d4bdce0fde1968a7fb1d2449 215 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 12 211 31.025 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RM25_RS05000 fcb76651d4bdce0fde1968a7fb1d2449 215 PIRSF PIRSF000495 11 214 1.7E-61 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RM25_RS05000 fcb76651d4bdce0fde1968a7fb1d2449 215 PANTHER PTHR21235:SF1 9 215 3.6E-70 T 22-04-2016 RM25_RS05000 fcb76651d4bdce0fde1968a7fb1d2449 215 SUPERFAMILY SSF52317 13 210 1.53E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS05000 fcb76651d4bdce0fde1968a7fb1d2449 215 PRINTS PR00097 Anthranilate synthase component II signature 85 96 9.4E-5 T 22-04-2016 RM25_RS05000 fcb76651d4bdce0fde1968a7fb1d2449 215 PRINTS PR00097 Anthranilate synthase component II signature 189 202 9.4E-5 T 22-04-2016 RM25_RS05000 fcb76651d4bdce0fde1968a7fb1d2449 215 PRINTS PR00097 Anthranilate synthase component II signature 112 120 9.4E-5 T 22-04-2016 RM25_RS05000 fcb76651d4bdce0fde1968a7fb1d2449 215 Pfam PF00117 Glutamine amidotransferase class-I 15 207 1.0E-17 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RM25_RS05905 0fbbf654c4ceea9e7a87911c34f095f1 376 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 56 65 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS05905 0fbbf654c4ceea9e7a87911c34f095f1 376 SUPERFAMILY SSF52374 48 374 1.3E-74 T 22-04-2016 RM25_RS05905 0fbbf654c4ceea9e7a87911c34f095f1 376 Pfam PF00579 tRNA synthetases class I (W and Y) 47 329 2.2E-52 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS05905 0fbbf654c4ceea9e7a87911c34f095f1 376 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 60 76 2.2E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RM25_RS05905 0fbbf654c4ceea9e7a87911c34f095f1 376 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 244 254 2.2E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RM25_RS05905 0fbbf654c4ceea9e7a87911c34f095f1 376 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 188 209 2.2E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RM25_RS05905 0fbbf654c4ceea9e7a87911c34f095f1 376 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 111 130 2.2E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RM25_RS05905 0fbbf654c4ceea9e7a87911c34f095f1 376 Gene3D G3DSA:1.10.240.10 254 342 2.2E-28 T 22-04-2016 RM25_RS05905 0fbbf654c4ceea9e7a87911c34f095f1 376 Gene3D G3DSA:3.40.50.620 47 253 5.8E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS05905 0fbbf654c4ceea9e7a87911c34f095f1 376 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 48 372 3.4E-68 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RM25_RS05905 0fbbf654c4ceea9e7a87911c34f095f1 376 PANTHER PTHR10055 47 376 1.4E-98 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RM25_RS07890 bdb7f74adcbb34e7755ddf5762e06b81 247 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 121 127 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RM25_RS07890 bdb7f74adcbb34e7755ddf5762e06b81 247 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 180 199 6.6E-6 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 RM25_RS07890 bdb7f74adcbb34e7755ddf5762e06b81 247 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 118 130 6.6E-6 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 RM25_RS07890 bdb7f74adcbb34e7755ddf5762e06b81 247 PANTHER PTHR13370 82 127 9.0E-16 T 22-04-2016 RM25_RS07890 bdb7f74adcbb34e7755ddf5762e06b81 247 PANTHER PTHR13370 159 234 9.0E-16 T 22-04-2016 RM25_RS07890 bdb7f74adcbb34e7755ddf5762e06b81 247 SUPERFAMILY SSF53335 168 247 6.66E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07890 bdb7f74adcbb34e7755ddf5762e06b81 247 SUPERFAMILY SSF53335 93 139 6.66E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07890 bdb7f74adcbb34e7755ddf5762e06b81 247 Gene3D G3DSA:3.40.50.150 167 247 1.4E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07890 bdb7f74adcbb34e7755ddf5762e06b81 247 Gene3D G3DSA:3.40.50.150 94 133 1.4E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07890 bdb7f74adcbb34e7755ddf5762e06b81 247 PANTHER PTHR13370:SF7 82 127 9.0E-16 T 22-04-2016 RM25_RS07890 bdb7f74adcbb34e7755ddf5762e06b81 247 PANTHER PTHR13370:SF7 159 234 9.0E-16 T 22-04-2016 RM25_RS07890 bdb7f74adcbb34e7755ddf5762e06b81 247 Pfam PF01555 DNA methylase 118 247 4.3E-24 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 PANTHER PTHR11540 1 319 8.0E-68 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 151 1.2E-19 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 PIRSF PIRSF000102 1 323 1.9E-87 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 SUPERFAMILY SSF56327 152 316 2.23E-44 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 Gene3D G3DSA:3.40.50.720 4 154 2.4E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 PRINTS PR00086 L-lactate dehydrogenase signature 125 145 1.1E-22 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 PRINTS PR00086 L-lactate dehydrogenase signature 30 54 1.1E-22 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 PRINTS PR00086 L-lactate dehydrogenase signature 149 167 1.1E-22 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 PRINTS PR00086 L-lactate dehydrogenase signature 179 192 1.1E-22 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 1.1E-22 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 154 317 1.7E-16 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 SUPERFAMILY SSF51735 3 153 1.56E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 PANTHER PTHR11540:SF3 1 319 8.0E-68 T 22-04-2016 RM25_RS05095 2c2ad3e1abf07d64f9976a923786b29a 326 Gene3D G3DSA:3.90.110.10 155 317 7.8E-46 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RM25_RS03900 ccae17cda9c58e29681effc2f71d1540 264 PANTHER PTHR13887:SF14 10 264 3.1E-18 T 22-04-2016 RM25_RS03900 ccae17cda9c58e29681effc2f71d1540 264 SUPERFAMILY SSF52833 94 254 1.58E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS03900 ccae17cda9c58e29681effc2f71d1540 264 Gene3D G3DSA:3.40.30.10 91 260 4.9E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS03900 ccae17cda9c58e29681effc2f71d1540 264 Pfam PF13462 Thioredoxin 94 257 2.6E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS03900 ccae17cda9c58e29681effc2f71d1540 264 PANTHER PTHR13887 10 264 3.1E-18 T 22-04-2016 RM25_RS09855 307729ecb344122a59838cd85cb48da5 225 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 9 65 1.9E-13 T 22-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 RM25_RS09855 307729ecb344122a59838cd85cb48da5 225 SUPERFAMILY SSF46785 8 95 3.74E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS09855 307729ecb344122a59838cd85cb48da5 225 PANTHER PTHR33238 6 225 1.3E-68 T 22-04-2016 RM25_RS09855 307729ecb344122a59838cd85cb48da5 225 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 69 137 2.4E-30 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RM25_RS09855 307729ecb344122a59838cd85cb48da5 225 Gene3D G3DSA:1.10.60.10 79 143 6.7E-31 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RM25_RS09855 307729ecb344122a59838cd85cb48da5 225 SUPERFAMILY SSF47979 69 142 1.7E-26 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RM25_RS09855 307729ecb344122a59838cd85cb48da5 225 PANTHER PTHR33238:SF1 6 225 1.3E-68 T 22-04-2016 RM25_RS09855 307729ecb344122a59838cd85cb48da5 225 SMART SM00899 149 223 1.3E-7 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RM25_RS09855 307729ecb344122a59838cd85cb48da5 225 SUPERFAMILY SSF50037 134 223 2.29E-5 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal RM25_RS09855 307729ecb344122a59838cd85cb48da5 225 Gene3D G3DSA:1.10.10.10 8 76 1.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS09855 307729ecb344122a59838cd85cb48da5 225 Pfam PF04023 FeoA domain 149 223 8.0E-9 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RM25_RS09855 307729ecb344122a59838cd85cb48da5 225 SMART SM00529 30 129 4.1E-39 T 22-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 RM25_RS08045 15b2a119f7ffb56e51ea9488d1134bf8 257 Pfam PF13460 NAD(P)H-binding 12 193 5.0E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08045 15b2a119f7ffb56e51ea9488d1134bf8 257 PANTHER PTHR15020:SF11 7 201 1.5E-35 T 22-04-2016 RM25_RS08045 15b2a119f7ffb56e51ea9488d1134bf8 257 PANTHER PTHR15020 7 201 1.5E-35 T 22-04-2016 RM25_RS08045 15b2a119f7ffb56e51ea9488d1134bf8 257 SUPERFAMILY SSF51735 6 219 4.76E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08045 15b2a119f7ffb56e51ea9488d1134bf8 257 Gene3D G3DSA:3.40.50.720 6 204 1.0E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07600 a476f33e5354eb1a6ede1206e168b9a6 362 TIGRFAM TIGR01900 dapE-gram_pos: succinyl-diaminopimelate desuccinylase 6 356 5.2E-148 T 22-04-2016 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RM25_RS07600 a476f33e5354eb1a6ede1206e168b9a6 362 Pfam PF07687 Peptidase dimerisation domain 169 266 8.3E-15 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS07600 a476f33e5354eb1a6ede1206e168b9a6 362 SUPERFAMILY SSF53187 6 181 1.11E-41 T 22-04-2016 RM25_RS07600 a476f33e5354eb1a6ede1206e168b9a6 362 SUPERFAMILY SSF53187 277 358 1.11E-41 T 22-04-2016 RM25_RS07600 a476f33e5354eb1a6ede1206e168b9a6 362 Gene3D G3DSA:3.30.70.360 178 267 1.2E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS07600 a476f33e5354eb1a6ede1206e168b9a6 362 Gene3D G3DSA:3.40.630.10 300 356 1.3E-44 T 22-04-2016 RM25_RS07600 a476f33e5354eb1a6ede1206e168b9a6 362 Gene3D G3DSA:3.40.630.10 6 177 1.3E-44 T 22-04-2016 RM25_RS07600 a476f33e5354eb1a6ede1206e168b9a6 362 Pfam PF01546 Peptidase family M20/M25/M40 65 355 1.1E-19 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RM25_RS07600 a476f33e5354eb1a6ede1206e168b9a6 362 PANTHER PTHR11014 10 344 7.9E-47 T 22-04-2016 RM25_RS07600 a476f33e5354eb1a6ede1206e168b9a6 362 SUPERFAMILY SSF55031 169 267 2.24E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS06420 59201010192e712bd95f3bea62c9cb40 584 Gene3D G3DSA:3.40.50.880 292 544 7.1E-91 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS06420 59201010192e712bd95f3bea62c9cb40 584 PANTHER PTHR11550 1 541 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RM25_RS06420 59201010192e712bd95f3bea62c9cb40 584 Pfam PF00117 Glutamine amidotransferase class-I 306 538 6.0E-49 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RM25_RS06420 59201010192e712bd95f3bea62c9cb40 584 SUPERFAMILY SSF52317 293 544 1.15E-72 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS06420 59201010192e712bd95f3bea62c9cb40 584 SUPERFAMILY SSF52540 7 271 1.92E-116 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06420 59201010192e712bd95f3bea62c9cb40 584 Gene3D G3DSA:3.40.50.300 4 289 1.1E-129 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06420 59201010192e712bd95f3bea62c9cb40 584 Hamap MF_01227 CTP synthase [pyrG]. 7 543 49.753 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RM25_RS06420 59201010192e712bd95f3bea62c9cb40 584 TIGRFAM TIGR00337 PyrG: CTP synthase 6 538 6.4E-233 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RM25_RS06420 59201010192e712bd95f3bea62c9cb40 584 Pfam PF06418 CTP synthase N-terminus 8 271 7.6E-122 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RM25_RS07025 9918802d054157fc650ab13eda862cc1 299 Gene3D G3DSA:3.20.20.70 29 165 7.0E-49 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS07025 9918802d054157fc650ab13eda862cc1 299 Gene3D G3DSA:3.20.20.70 197 283 7.0E-49 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS07025 9918802d054157fc650ab13eda862cc1 299 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 9 299 51.472 T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 RM25_RS07025 9918802d054157fc650ab13eda862cc1 299 ProSitePatterns PS01235 PdxS/SNZ family signature. 210 228 - T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 RM25_RS07025 9918802d054157fc650ab13eda862cc1 299 PIRSF PIRSF029271 1 299 7.8E-151 T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 RM25_RS07025 9918802d054157fc650ab13eda862cc1 299 PANTHER PTHR31829 4 299 5.5E-213 T 22-04-2016 RM25_RS07025 9918802d054157fc650ab13eda862cc1 299 SUPERFAMILY SSF51366 23 270 8.0E-63 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RM25_RS07025 9918802d054157fc650ab13eda862cc1 299 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 14 299 3.0E-144 T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 RM25_RS07025 9918802d054157fc650ab13eda862cc1 299 Pfam PF01680 SOR/SNZ family 12 217 2.1E-107 T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 RM25_RS06205 ff3108efb1c212c7aaa0ed2e88cc70e9 141 Pfam PF01475 Ferric uptake regulator family 12 127 1.4E-27 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RM25_RS06205 ff3108efb1c212c7aaa0ed2e88cc70e9 141 Gene3D G3DSA:1.10.10.10 12 79 4.2E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS06205 ff3108efb1c212c7aaa0ed2e88cc70e9 141 PANTHER PTHR33202 12 138 1.8E-37 T 22-04-2016 RM25_RS06205 ff3108efb1c212c7aaa0ed2e88cc70e9 141 PANTHER PTHR33202:SF5 12 138 1.8E-37 T 22-04-2016 RM25_RS06205 ff3108efb1c212c7aaa0ed2e88cc70e9 141 SUPERFAMILY SSF46785 12 131 3.54E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 Gene3D G3DSA:3.30.390.30 357 476 1.7E-25 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PANTHER PTHR22912:SF166 1 65 7.2E-118 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PANTHER PTHR22912:SF166 86 470 7.2E-118 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 1.1E-21 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 1.1E-21 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 1.1E-21 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 291 1.1E-21 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.1E-21 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 SUPERFAMILY SSF51905 9 344 1.85E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 SUPERFAMILY SSF55424 357 471 5.5E-25 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PIRSF PIRSF000350 1 468 2.5E-61 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 Gene3D G3DSA:3.50.50.60 11 149 9.4E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 Gene3D G3DSA:3.50.50.60 150 340 1.2E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PANTHER PTHR22912 1 65 7.2E-118 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PANTHER PTHR22912 86 470 7.2E-118 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 462 2.9E-20 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 2.0E-44 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 2.0E-44 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 290 2.0E-44 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 419 434 2.0E-44 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 2.0E-44 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 2.0E-44 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 353 374 2.0E-44 T 22-04-2016 RM25_RS06125 9c13ab6ca176e69c69019d78e9a75b67 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 319 4.2E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS03995 dad1330b35521ed19d6cc4b9cee6fc4d 202 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 9 18 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 RM25_RS03995 dad1330b35521ed19d6cc4b9cee6fc4d 202 Gene3D G3DSA:3.40.50.1240 2 199 1.1E-56 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS03995 dad1330b35521ed19d6cc4b9cee6fc4d 202 PANTHER PTHR23029:SF1 4 198 1.7E-51 T 22-04-2016 RM25_RS03995 dad1330b35521ed19d6cc4b9cee6fc4d 202 PANTHER PTHR23029 4 198 1.7E-51 T 22-04-2016 RM25_RS03995 dad1330b35521ed19d6cc4b9cee6fc4d 202 SUPERFAMILY SSF53254 4 199 4.93E-57 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS03995 dad1330b35521ed19d6cc4b9cee6fc4d 202 SMART SM00855 6 159 7.4E-22 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS03995 dad1330b35521ed19d6cc4b9cee6fc4d 202 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 199 4.9E-58 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS03300 5d77505d28740c47acaa8e86a9415c94 335 Pfam PF01180 Dihydroorotate dehydrogenase 94 294 4.0E-9 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RM25_RS03300 5d77505d28740c47acaa8e86a9415c94 335 PANTHER PTHR11938:SF103 106 334 9.9E-49 T 22-04-2016 RM25_RS03300 5d77505d28740c47acaa8e86a9415c94 335 SUPERFAMILY SSF51395 3 311 1.83E-49 T 22-04-2016 RM25_RS03300 5d77505d28740c47acaa8e86a9415c94 335 PANTHER PTHR11938 106 334 9.9E-49 T 22-04-2016 RM25_RS03300 5d77505d28740c47acaa8e86a9415c94 335 PIRSF PIRSF000164 1 313 9.1E-32 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 RM25_RS03300 5d77505d28740c47acaa8e86a9415c94 335 Gene3D G3DSA:3.20.20.70 8 301 2.1E-44 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 Gene3D G3DSA:3.40.50.140 6 150 3.0E-48 T 22-04-2016 IPR006171 Toprim domain RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 SUPERFAMILY SSF56712 6 593 1.06E-173 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 Pfam PF01131 DNA topoisomerase 144 589 2.3E-118 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 Gene3D G3DSA:2.70.20.10 345 498 1.2E-30 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 Gene3D G3DSA:2.70.20.10 200 342 1.6E-25 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 Pfam PF13368 Topoisomerase C-terminal repeat 817 869 6.4E-22 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 Pfam PF13368 Topoisomerase C-terminal repeat 684 750 1.5E-12 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 Pfam PF13368 Topoisomerase C-terminal repeat 756 805 2.3E-15 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 Pfam PF13368 Topoisomerase C-terminal repeat 632 673 1.8E-8 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 Hamap MF_00952 DNA topoisomerase 1 [topA]. 6 764 50.618 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 8 657 3.3E-235 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 SMART SM00437 278 552 3.2E-102 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 PANTHER PTHR11390 4 239 2.9E-258 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 PANTHER PTHR11390 256 593 2.9E-258 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 SMART SM00436 120 208 9.0E-45 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 1.9E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 515 529 1.9E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 1.9E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 94 107 1.9E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 178 196 1.9E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 Pfam PF01751 Toprim domain 8 129 1.0E-28 T 22-04-2016 IPR006171 Toprim domain RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 SMART SM00493 6 120 5.2E-38 T 22-04-2016 IPR006171 Toprim domain RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 Gene3D G3DSA:1.10.460.10 499 593 5.6E-49 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 Gene3D G3DSA:1.10.460.10 151 198 5.6E-49 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 PANTHER PTHR11390:SF27 4 239 2.9E-258 T 22-04-2016 RM25_RS09665 cbfb55a1ab8a0cdc9112b5054b429aac 931 PANTHER PTHR11390:SF27 256 593 2.9E-258 T 22-04-2016 RM25_RS08965 0003f531defb53edd38c220fa394be98 501 Pfam PF00171 Aldehyde dehydrogenase family 20 478 8.7E-132 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RM25_RS08965 0003f531defb53edd38c220fa394be98 501 PANTHER PTHR11699:SF27 6 484 1.1E-216 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 RM25_RS08965 0003f531defb53edd38c220fa394be98 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 7 483 4.4E-189 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 RM25_RS08965 0003f531defb53edd38c220fa394be98 501 Gene3D G3DSA:3.40.309.10 260 452 2.8E-60 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RM25_RS08965 0003f531defb53edd38c220fa394be98 501 PANTHER PTHR11699 6 484 1.1E-216 T 22-04-2016 RM25_RS08965 0003f531defb53edd38c220fa394be98 501 SUPERFAMILY SSF53720 5 484 2.09E-140 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RM25_RS08965 0003f531defb53edd38c220fa394be98 501 Gene3D G3DSA:3.40.605.10 5 259 1.7E-83 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RM25_RS05215 50b310b0f6cb0df76039c7341a3865b2 230 PANTHER PTHR18901 1 188 3.5E-42 T 22-04-2016 RM25_RS05215 50b310b0f6cb0df76039c7341a3865b2 230 SUPERFAMILY SSF56784 1 189 1.19E-37 T 22-04-2016 IPR023214 HAD-like domain RM25_RS05215 50b310b0f6cb0df76039c7341a3865b2 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 185 5.6E-23 T 22-04-2016 IPR023214 HAD-like domain RM25_RS05215 50b310b0f6cb0df76039c7341a3865b2 230 Gene3D G3DSA:3.40.50.1000 90 188 5.5E-34 T 22-04-2016 IPR023214 HAD-like domain RM25_RS05215 50b310b0f6cb0df76039c7341a3865b2 230 Gene3D G3DSA:3.40.50.1000 1 12 5.5E-34 T 22-04-2016 IPR023214 HAD-like domain RM25_RS05215 50b310b0f6cb0df76039c7341a3865b2 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 186 2.3E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS11385 c7aff1ba9573c233a5db9736c970ea62 404 PANTHER PTHR11712 45 368 6.5E-54 T 22-04-2016 RM25_RS11385 c7aff1ba9573c233a5db9736c970ea62 404 PRINTS PR00359 B-class P450 signature 340 349 2.4E-30 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RM25_RS11385 c7aff1ba9573c233a5db9736c970ea62 404 PRINTS PR00359 B-class P450 signature 349 360 2.4E-30 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RM25_RS11385 c7aff1ba9573c233a5db9736c970ea62 404 PRINTS PR00359 B-class P450 signature 291 318 2.4E-30 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RM25_RS11385 c7aff1ba9573c233a5db9736c970ea62 404 PRINTS PR00359 B-class P450 signature 148 163 2.4E-30 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RM25_RS11385 c7aff1ba9573c233a5db9736c970ea62 404 PRINTS PR00359 B-class P450 signature 131 147 2.4E-30 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RM25_RS11385 c7aff1ba9573c233a5db9736c970ea62 404 PRINTS PR00359 B-class P450 signature 319 334 2.4E-30 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RM25_RS11385 c7aff1ba9573c233a5db9736c970ea62 404 PRINTS PR00359 B-class P450 signature 274 285 2.4E-30 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RM25_RS11385 c7aff1ba9573c233a5db9736c970ea62 404 PRINTS PR00359 B-class P450 signature 85 96 2.4E-30 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RM25_RS11385 c7aff1ba9573c233a5db9736c970ea62 404 Pfam PF00067 Cytochrome P450 272 367 7.5E-16 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RM25_RS11385 c7aff1ba9573c233a5db9736c970ea62 404 SUPERFAMILY SSF48264 26 376 6.94E-69 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RM25_RS11385 c7aff1ba9573c233a5db9736c970ea62 404 Gene3D G3DSA:1.10.630.10 20 396 1.5E-83 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RM25_RS06530 25fae94c75f88d09ab2886474b269dd2 286 Pfam PF00588 SpoU rRNA Methylase family 123 266 4.2E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RM25_RS06530 25fae94c75f88d09ab2886474b269dd2 286 SMART SM00967 40 114 9.1E-10 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RM25_RS06530 25fae94c75f88d09ab2886474b269dd2 286 Gene3D G3DSA:3.30.1330.30 20 109 9.1E-19 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RM25_RS06530 25fae94c75f88d09ab2886474b269dd2 286 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 40 109 1.6E-8 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RM25_RS06530 25fae94c75f88d09ab2886474b269dd2 286 SUPERFAMILY SSF55315 19 110 7.89E-16 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RM25_RS06530 25fae94c75f88d09ab2886474b269dd2 286 SUPERFAMILY SSF75217 107 273 6.21E-40 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RM25_RS06530 25fae94c75f88d09ab2886474b269dd2 286 Gene3D G3DSA:3.40.1280.10 119 272 6.3E-46 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RM25_RS06530 25fae94c75f88d09ab2886474b269dd2 286 PANTHER PTHR12029 15 283 1.1E-53 T 22-04-2016 RM25_RS04920 42aeb114f433950372a7b0ecaa7c0d30 122 PANTHER PTHR21256 8 106 3.9E-58 T 22-04-2016 RM25_RS04920 42aeb114f433950372a7b0ecaa7c0d30 122 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 8 111 30.75 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RM25_RS04920 42aeb114f433950372a7b0ecaa7c0d30 122 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 34 106 4.6E-34 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RM25_RS04920 42aeb114f433950372a7b0ecaa7c0d30 122 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 57 108 3.0E-17 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RM25_RS04920 42aeb114f433950372a7b0ecaa7c0d30 122 SUPERFAMILY SSF141734 7 108 2.35E-46 T 22-04-2016 RM25_RS08930 44525b5e86079b266472cc852656bb97 329 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 326 5.0E-118 T 22-04-2016 IPR030827 Inositol 2-dehydrogenase RM25_RS08930 44525b5e86079b266472cc852656bb97 329 Gene3D G3DSA:3.40.50.720 1 132 3.5E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08930 44525b5e86079b266472cc852656bb97 329 PANTHER PTHR22604 2 328 9.9E-102 T 22-04-2016 RM25_RS08930 44525b5e86079b266472cc852656bb97 329 Gene3D G3DSA:3.30.360.10 133 328 9.6E-52 T 22-04-2016 RM25_RS08930 44525b5e86079b266472cc852656bb97 329 SUPERFAMILY SSF51735 2 185 2.4E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08930 44525b5e86079b266472cc852656bb97 329 SUPERFAMILY SSF55347 125 282 1.08E-26 T 22-04-2016 RM25_RS08930 44525b5e86079b266472cc852656bb97 329 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 230 4.5E-7 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RM25_RS08930 44525b5e86079b266472cc852656bb97 329 PANTHER PTHR22604:SF92 2 328 9.9E-102 T 22-04-2016 RM25_RS08930 44525b5e86079b266472cc852656bb97 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 108 1.1E-23 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 PANTHER PTHR11751:SF333 133 157 1.4E-18 T 22-04-2016 RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 PANTHER PTHR11751:SF333 20 87 1.4E-18 T 22-04-2016 RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 Gene3D G3DSA:3.40.1410.10 83 246 2.1E-45 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 SUPERFAMILY SSF46785 15 89 8.62E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 SMART SM00345 26 85 5.9E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 SUPERFAMILY SSF64288 73 246 2.51E-45 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 SMART SM00866 105 242 1.9E-35 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 5.22E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 5.22E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 85 1.9E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 PANTHER PTHR11751 133 157 1.4E-18 T 22-04-2016 RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 PANTHER PTHR11751 20 87 1.4E-18 T 22-04-2016 RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 Gene3D G3DSA:1.10.10.10 14 82 9.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08940 c8bcf138b12d6b5707a92bee4a534a0c 250 Pfam PF07702 UTRA domain 106 241 5.4E-36 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 SUPERFAMILY SSF52335 958 1098 7.06E-29 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1080 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 303 310 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 843 850 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Gene3D G3DSA:3.30.1490.20 691 749 2.6E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Gene3D G3DSA:3.30.1490.20 149 208 1.2E-20 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Gene3D G3DSA:3.40.50.20 3 108 5.6E-43 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 SUPERFAMILY SSF56059 678 952 3.18E-92 T 22-04-2016 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 431 548 2.8E-38 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Pfam PF02142 MGS-like domain 979 1070 1.1E-15 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 PANTHER PTHR11405 1 1098 0.0 T 22-04-2016 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 PANTHER PTHR11405:SF5 1 1098 0.0 T 22-04-2016 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Gene3D G3DSA:1.10.1030.10 405 539 1.5E-44 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 SMART SM01096 427 548 1.2E-58 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 678 879 3.1E-32 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 148 340 4.4E-66 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.9E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 245 262 2.9E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 303 332 2.9E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.9E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 210 229 2.9E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 174 186 2.9E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 385 403 2.9E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 SUPERFAMILY SSF56059 128 406 1.2E-101 T 22-04-2016 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 SUPERFAMILY SSF52440 559 680 3.74E-43 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 SMART SM00851 975 1070 4.1E-21 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1091 12.819 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 714 728 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 170 184 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Gene3D G3DSA:3.40.50.1380 958 1099 1.9E-36 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Gene3D G3DSA:3.30.470.20 209 404 7.5E-77 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Gene3D G3DSA:3.30.470.20 750 954 5.1E-64 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 SUPERFAMILY SSF48108 402 555 1.7E-44 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 Gene3D G3DSA:3.40.50.20 540 667 6.4E-56 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RM25_RS05140 a305c44e501d2e38a4f0c7c00135b652 1113 SUPERFAMILY SSF52440 1 127 4.6E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RM25_RS10325 79784def4fc3adca6d8134af50750022 183 Pfam PF08666 SAF domain 23 84 2.3E-5 T 22-04-2016 IPR013974 SAF domain RM25_RS10325 79784def4fc3adca6d8134af50750022 183 SMART SM00858 22 85 0.0056 T 22-04-2016 IPR013974 SAF domain RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 PANTHER PTHR15184 16 482 2.4E-294 T 22-04-2016 RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 Hamap MF_01347 ATP synthase subunit beta [atpB]. 14 479 52.795 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 Gene3D G3DSA:3.40.50.300 93 363 3.5E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 19 90 5.5E-22 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 Gene3D G3DSA:1.10.1140.10 365 482 5.9E-47 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 SUPERFAMILY SSF52540 94 364 1.37E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 PANTHER PTHR15184:SF8 16 482 2.4E-294 T 22-04-2016 RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 SUPERFAMILY SSF47917 364 480 8.89E-47 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 Gene3D G3DSA:2.40.10.170 13 92 1.7E-28 T 22-04-2016 RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 SUPERFAMILY SSF50615 16 92 4.45E-24 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 SMART SM00382 160 346 4.2E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 148 361 7.3E-64 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05565 0bc7bbf09a56b49693ab7736062418fc 483 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 16 478 1.4E-232 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS08570 22db8a0c54e341f94e479c0e420e3f26 520 PANTHER PTHR11119 21 69 2.8E-109 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RM25_RS08570 22db8a0c54e341f94e479c0e420e3f26 520 PANTHER PTHR11119 98 500 2.8E-109 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RM25_RS08570 22db8a0c54e341f94e479c0e420e3f26 520 PANTHER PTHR11119:SF9 21 69 2.8E-109 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 RM25_RS08570 22db8a0c54e341f94e479c0e420e3f26 520 PANTHER PTHR11119:SF9 98 500 2.8E-109 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 RM25_RS08570 22db8a0c54e341f94e479c0e420e3f26 520 Pfam PF00860 Permease family 92 472 1.0E-23 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RM25_RS04745 296c6a683bae84faa05ca7c8b2ab9c01 273 PANTHER PTHR34148:SF1 11 272 2.2E-41 T 22-04-2016 RM25_RS04745 296c6a683bae84faa05ca7c8b2ab9c01 273 Pfam PF02654 Cobalamin-5-phosphate synthase 24 267 2.8E-42 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 RM25_RS04745 296c6a683bae84faa05ca7c8b2ab9c01 273 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 273 37.29 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 RM25_RS04745 296c6a683bae84faa05ca7c8b2ab9c01 273 PANTHER PTHR34148 11 272 2.2E-41 T 22-04-2016 RM25_RS11485 621dba48c3e9f8bb65354dcaee875314 240 Pfam PF07077 Protein of unknown function (DUF1345) 63 227 5.0E-51 T 22-04-2016 IPR009781 Protein of unknown function DUF1345 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00369 422 444 29.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00369 917 940 410.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00369 124 147 54.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00369 305 328 52.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00369 752 775 51.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00369 961 982 140.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00369 635 658 36.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00369 283 304 110.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00369 708 729 76.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00369 80 103 4.7 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00369 730 751 24.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SUPERFAMILY SSF52058 892 979 2.95E-13 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00364 124 143 130.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00364 730 749 450.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00364 422 441 390.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00364 80 99 120.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00364 961 980 12.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00364 752 771 330.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00365 613 634 46.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00365 102 123 570.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00365 752 773 480.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00365 635 656 13.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00365 730 751 74.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00365 124 145 500.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00365 708 729 490.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00365 422 443 24.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00365 305 332 200.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SMART SM00365 80 101 72.0 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SUPERFAMILY SSF52058 56 168 2.32E-37 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SUPERFAMILY SSF52058 260 444 2.32E-37 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 SUPERFAMILY SSF52058 567 775 1.36E-32 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 Gene3D G3DSA:3.80.10.10 53 159 8.7E-57 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 Gene3D G3DSA:3.80.10.10 253 444 8.7E-57 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 Gene3D G3DSA:3.80.10.10 566 785 4.2E-36 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 PANTHER PTHR24365 564 765 3.5E-65 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 PANTHER PTHR24365 931 979 3.5E-65 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 PANTHER PTHR24365 276 348 3.5E-65 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 PANTHER PTHR24365 55 160 3.5E-65 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 PANTHER PTHR24365 400 437 3.5E-65 T 22-04-2016 RM25_RS11120 a07d6db5a189ed6e55a6652e7118e35c 1109 Gene3D G3DSA:3.80.10.10 891 981 2.2E-17 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 PANTHER PTHR11709 257 504 5.8E-89 T 22-04-2016 RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 PANTHER PTHR11709 64 206 5.8E-89 T 22-04-2016 RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 ProSitePatterns PS00079 Multicopper oxidases signature 1. 483 503 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 ProSitePatterns PS00079 Multicopper oxidases signature 1. 144 164 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 ProSitePatterns PS00080 Multicopper oxidases signature 2. 488 499 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 SUPERFAMILY SSF49503 47 193 5.74E-34 T 22-04-2016 IPR008972 Cupredoxin RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 Pfam PF07732 Multicopper oxidase 65 170 9.1E-30 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 SUPERFAMILY SSF49503 405 503 9.17E-32 T 22-04-2016 IPR008972 Cupredoxin RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 Pfam PF00394 Multicopper oxidase 257 356 2.2E-21 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 Gene3D G3DSA:2.60.40.420 46 172 3.1E-32 T 22-04-2016 IPR008972 Cupredoxin RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 SUPERFAMILY SSF49503 173 365 2.66E-33 T 22-04-2016 IPR008972 Cupredoxin RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 Pfam PF07731 Multicopper oxidase 403 503 1.4E-23 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 Gene3D G3DSA:2.60.40.420 383 505 4.1E-39 T 22-04-2016 IPR008972 Cupredoxin RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 PANTHER PTHR11709:SF33 257 504 5.8E-89 T 22-04-2016 RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 PANTHER PTHR11709:SF33 64 206 5.8E-89 T 22-04-2016 RM25_RS09085 307e369107445b7576f3ba37c8c277e4 506 Gene3D G3DSA:2.60.40.420 175 370 1.5E-45 T 22-04-2016 IPR008972 Cupredoxin RM25_RS09360 9667928812fa72f08edd327b437c1c3a 241 Gene3D G3DSA:1.20.1290.10 9 106 9.9E-20 T 22-04-2016 IPR029032 AhpD-like RM25_RS09360 9667928812fa72f08edd327b437c1c3a 241 Pfam PF07883 Cupin domain 149 211 6.3E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RM25_RS09360 9667928812fa72f08edd327b437c1c3a 241 Pfam PF02627 Carboxymuconolactone decarboxylase family 17 102 9.6E-18 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RM25_RS09360 9667928812fa72f08edd327b437c1c3a 241 PANTHER PTHR33570:SF1 9 112 4.4E-27 T 22-04-2016 RM25_RS09360 9667928812fa72f08edd327b437c1c3a 241 SUPERFAMILY SSF69118 9 112 1.32E-24 T 22-04-2016 IPR029032 AhpD-like RM25_RS09360 9667928812fa72f08edd327b437c1c3a 241 Gene3D G3DSA:2.60.120.10 127 230 1.3E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RM25_RS09360 9667928812fa72f08edd327b437c1c3a 241 SUPERFAMILY SSF51182 120 233 2.02E-21 T 22-04-2016 IPR011051 RmlC-like cupin domain RM25_RS09360 9667928812fa72f08edd327b437c1c3a 241 PANTHER PTHR33570 9 112 4.4E-27 T 22-04-2016 RM25_RS02905 19f8af12f617e3407d9aa7ab11779753 381 Gene3D G3DSA:3.40.50.2000 180 350 4.3E-24 T 22-04-2016 RM25_RS02905 19f8af12f617e3407d9aa7ab11779753 381 PANTHER PTHR12526 2 373 8.0E-81 T 22-04-2016 RM25_RS02905 19f8af12f617e3407d9aa7ab11779753 381 PANTHER PTHR12526:SF363 2 373 8.0E-81 T 22-04-2016 RM25_RS02905 19f8af12f617e3407d9aa7ab11779753 381 Pfam PF00534 Glycosyl transferases group 1 203 348 1.4E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RM25_RS02905 19f8af12f617e3407d9aa7ab11779753 381 Pfam PF13439 Glycosyltransferase Family 4 14 187 4.1E-25 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RM25_RS02905 19f8af12f617e3407d9aa7ab11779753 381 SUPERFAMILY SSF53756 2 369 8.52E-72 T 22-04-2016 RM25_RS08720 3426f21a4571b08b2ed1569c15d57c5a 460 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 61 189 1.9E-8 T 22-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 RM25_RS08720 3426f21a4571b08b2ed1569c15d57c5a 460 Pfam PF13224 Domain of unknown function (DUF4032) 227 389 2.1E-72 T 22-04-2016 IPR025111 Domain of unknown function DUF4032 RM25_RS08720 3426f21a4571b08b2ed1569c15d57c5a 460 SUPERFAMILY SSF56112 34 181 3.31E-7 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS08720 3426f21a4571b08b2ed1569c15d57c5a 460 Gene3D G3DSA:1.10.510.10 121 164 2.5E-4 T 22-04-2016 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 Gene3D G3DSA:3.30.300.10 145 244 1.6E-35 T 22-04-2016 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 125 135 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 394 52.213 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 SUPERFAMILY SSF55973 244 392 1.96E-64 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 244 382 3.8E-65 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 100 2.8E-35 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 Gene3D G3DSA:3.30.300.10 255 394 4.3E-64 T 22-04-2016 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 124 242 3.0E-42 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 PANTHER PTHR11964:SF1 4 389 2.1E-205 T 22-04-2016 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 SUPERFAMILY SSF55973 3 109 3.92E-38 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 PIRSF PIRSF000497 1 395 3.7E-156 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 391 1.1E-157 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 PANTHER PTHR11964 4 389 2.1E-205 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 SUPERFAMILY SSF55973 119 243 3.41E-42 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 270 278 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RM25_RS05170 94f5dedc1063c9e099bb52bcd7751de4 396 Gene3D G3DSA:3.30.300.10 10 144 7.2E-37 T 22-04-2016 RM25_RS09325 da4390f7ad80c7166570d1b9beeea979 349 SUPERFAMILY SSF103025 18 255 2.47E-29 T 22-04-2016 RM25_RS09325 da4390f7ad80c7166570d1b9beeea979 349 Gene3D G3DSA:3.30.70.1400 41 104 5.7E-6 T 22-04-2016 RM25_RS09325 da4390f7ad80c7166570d1b9beeea979 349 Gene3D G3DSA:2.40.30.110 258 319 7.3E-6 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RM25_RS09325 da4390f7ad80c7166570d1b9beeea979 349 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 240 310 2.3E-9 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RM25_RS09325 da4390f7ad80c7166570d1b9beeea979 349 SUPERFAMILY SSF101790 259 320 3.49E-5 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RM25_RS09325 da4390f7ad80c7166570d1b9beeea979 349 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 204 264 2.1E-20 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site RM25_RS09325 da4390f7ad80c7166570d1b9beeea979 349 Pfam PF01571 Aminomethyltransferase folate-binding domain 22 104 5.1E-6 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RM25_RS11145 b3170ba7d73f79ba2d047574c44a677e 424 PANTHER PTHR10357 44 380 3.9E-67 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 RM25_RS11145 b3170ba7d73f79ba2d047574c44a677e 424 PANTHER PTHR10357:SF10 44 380 3.9E-67 T 22-04-2016 RM25_RS11145 b3170ba7d73f79ba2d047574c44a677e 424 SMART SM00642 14 356 9.8E-52 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS11145 b3170ba7d73f79ba2d047574c44a677e 424 SUPERFAMILY SSF51445 4 362 1.06E-81 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS11145 b3170ba7d73f79ba2d047574c44a677e 424 Gene3D G3DSA:3.20.20.80 5 357 2.4E-83 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS11145 b3170ba7d73f79ba2d047574c44a677e 424 Pfam PF00128 Alpha amylase, catalytic domain 43 318 2.1E-48 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS08915 3d3a81bd57f24707f9b615b6361f79f5 202 PANTHER PTHR30086 1 201 4.7E-67 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RM25_RS08915 3d3a81bd57f24707f9b615b6361f79f5 202 PANTHER PTHR30086:SF0 1 201 4.7E-67 T 22-04-2016 RM25_RS08915 3d3a81bd57f24707f9b615b6361f79f5 202 Pfam PF01810 LysE type translocator 14 201 2.0E-45 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RM25_RS06525 6e3e12589edb4dd90da683eaa4ac0f9b 364 Pfam PF01409 tRNA synthetases class II core domain (F) 104 358 1.2E-92 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 RM25_RS06525 6e3e12589edb4dd90da683eaa4ac0f9b 364 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 31 99 1.6E-14 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RM25_RS06525 6e3e12589edb4dd90da683eaa4ac0f9b 364 Gene3D G3DSA:3.30.930.10 21 358 1.2E-112 T 22-04-2016 RM25_RS06525 6e3e12589edb4dd90da683eaa4ac0f9b 364 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 56 357 1.6E-82 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RM25_RS06525 6e3e12589edb4dd90da683eaa4ac0f9b 364 SUPERFAMILY SSF55681 104 357 2.44E-72 T 22-04-2016 RM25_RS06525 6e3e12589edb4dd90da683eaa4ac0f9b 364 PANTHER PTHR11538 298 355 8.3E-87 T 22-04-2016 RM25_RS06525 6e3e12589edb4dd90da683eaa4ac0f9b 364 PANTHER PTHR11538 102 280 8.3E-87 T 22-04-2016 RM25_RS06525 6e3e12589edb4dd90da683eaa4ac0f9b 364 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 20 359 42.698 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 RM25_RS06525 6e3e12589edb4dd90da683eaa4ac0f9b 364 SUPERFAMILY SSF46589 25 111 4.71E-15 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RM25_RS08820 040b5b72601afcdf57a4ca63e21f71c1 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 231 43.126 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RM25_RS08820 040b5b72601afcdf57a4ca63e21f71c1 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 RM25_RS08820 040b5b72601afcdf57a4ca63e21f71c1 249 SUPERFAMILY SSF53254 1 222 1.26E-70 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS08820 040b5b72601afcdf57a4ca63e21f71c1 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 127 1.2E-26 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS08820 040b5b72601afcdf57a4ca63e21f71c1 249 PANTHER PTHR11931 2 249 2.2E-147 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RM25_RS08820 040b5b72601afcdf57a4ca63e21f71c1 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 248 4.5E-113 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RM25_RS08820 040b5b72601afcdf57a4ca63e21f71c1 249 Gene3D G3DSA:3.40.50.1240 2 248 1.7E-88 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS08820 040b5b72601afcdf57a4ca63e21f71c1 249 SMART SM00855 4 190 6.4E-23 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PANTHER PTHR22912 2 308 3.1E-147 T 22-04-2016 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PANTHER PTHR22912:SF48 2 308 3.1E-147 T 22-04-2016 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 5.1E-32 T 22-04-2016 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.1E-32 T 22-04-2016 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.1E-32 T 22-04-2016 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 5.1E-32 T 22-04-2016 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 5.1E-32 T 22-04-2016 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 296 1.0E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 SUPERFAMILY SSF51905 2 306 2.85E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 Gene3D G3DSA:3.50.50.60 242 309 3.9E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 Gene3D G3DSA:3.50.50.60 4 121 3.9E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 307 2.6E-115 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 Gene3D G3DSA:3.50.50.60 122 241 2.7E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 1.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 1.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 1.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 1.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 1.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 256 1.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 288 307 1.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS11570 f3acaf7bce585d3454a1d95fcffb4d2b 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 743 1.1E-90 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 468 474 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00943 Copper-transporting ATPase signature 387 401 3.2E-13 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00943 Copper-transporting ATPase signature 253 271 3.2E-13 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00943 Copper-transporting ATPase signature 233 252 3.2E-13 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00943 Copper-transporting ATPase signature 175 194 3.2E-13 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00943 Copper-transporting ATPase signature 738 752 3.2E-13 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00943 Copper-transporting ATPase signature 642 659 3.2E-13 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00943 Copper-transporting ATPase signature 449 464 3.2E-13 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 Gene3D G3DSA:3.40.50.1000 593 733 1.1E-53 T 22-04-2016 IPR023214 HAD-like domain RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 Gene3D G3DSA:3.40.50.1000 437 481 1.1E-53 T 22-04-2016 IPR023214 HAD-like domain RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 700 2.1E-28 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 466 480 2.1E-28 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 314 328 2.1E-28 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 612 622 2.1E-28 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 684 2.1E-28 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 590 601 2.1E-28 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 SUPERFAMILY SSF56784 523 772 5.5E-57 T 22-04-2016 IPR023214 HAD-like domain RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 SUPERFAMILY SSF56784 464 484 5.5E-57 T 22-04-2016 IPR023214 HAD-like domain RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 PANTHER PTHR24093 110 776 1.7E-236 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 SUPERFAMILY SSF81653 269 364 6.93E-28 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 Gene3D G3DSA:3.40.1110.10 482 592 6.3E-20 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 190 774 3.6E-193 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 Pfam PF00122 E1-E2 ATPase 234 457 2.5E-69 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 Pfam PF00702 haloacid dehalogenase-like hydrolase 462 679 3.3E-44 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 171 775 1.2E-177 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 SUPERFAMILY SSF81665 231 267 1.14E-14 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 SUPERFAMILY SSF81665 365 460 1.14E-14 T 22-04-2016 RM25_RS11275 b4b9466cd523c6a82be69dc75b55c838 778 Gene3D G3DSA:2.70.150.10 206 365 1.9E-31 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RM25_RS07210 4d11f2b706e74d557634e113cc50100c 142 PANTHER PTHR33823 14 142 2.2E-43 T 22-04-2016 RM25_RS07210 4d11f2b706e74d557634e113cc50100c 142 PANTHER PTHR33823:SF7 14 142 2.2E-43 T 22-04-2016 RM25_RS07210 4d11f2b706e74d557634e113cc50100c 142 SUPERFAMILY SSF109635 11 106 1.96E-10 T 22-04-2016 RM25_RS07210 4d11f2b706e74d557634e113cc50100c 142 SUPERFAMILY SSF57716 108 141 2.52E-9 T 22-04-2016 RM25_RS07210 4d11f2b706e74d557634e113cc50100c 142 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 106 141 4.8E-12 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RM25_RS07210 4d11f2b706e74d557634e113cc50100c 142 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 1.4E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria RM25_RS07210 4d11f2b706e74d557634e113cc50100c 142 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 1.4E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria RM25_RS07210 4d11f2b706e74d557634e113cc50100c 142 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.4E-45 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 SUPERFAMILY SSF53671 4 332 2.62E-89 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PANTHER PTHR11405 1 275 4.5E-171 T 22-04-2016 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PANTHER PTHR11405 295 333 4.5E-171 T 22-04-2016 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.0E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.0E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 1.0E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 295 318 1.0E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 Gene3D G3DSA:3.40.50.1370 5 143 7.7E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 330 1.0E-116 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 309 320 8.2E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 8.2E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 8.2E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 8.2E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 8.2E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 328 2.3E-46 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 331 76.112 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 Gene3D G3DSA:3.40.50.1370 144 317 7.7E-58 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PANTHER PTHR11405:SF44 1 275 4.5E-171 T 22-04-2016 RM25_RS10795 6abc752c7a1004f1aeb3dd5d94aa3826 334 PANTHER PTHR11405:SF44 295 333 4.5E-171 T 22-04-2016 RM25_RS01380 4092254e3aa26d7b25d5399928400db8 396 Pfam PF06245 Protein of unknown function (DUF1015) 5 389 6.1E-87 T 22-04-2016 IPR008323 Uncharacterised conserved protein UCP033563 RM25_RS01380 4092254e3aa26d7b25d5399928400db8 396 PANTHER PTHR36454:SF1 1 394 1.4E-66 T 22-04-2016 RM25_RS01380 4092254e3aa26d7b25d5399928400db8 396 PANTHER PTHR36454 1 394 1.4E-66 T 22-04-2016 RM25_RS08705 075829c5b47b3fadea1d24fb3b5a5ca5 470 PANTHER PTHR30182:SF1 1 466 7.9E-201 T 22-04-2016 RM25_RS08705 075829c5b47b3fadea1d24fb3b5a5ca5 470 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 467 9.9E-184 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 RM25_RS08705 075829c5b47b3fadea1d24fb3b5a5ca5 470 Pfam PF03313 Serine dehydratase alpha chain 195 464 4.8E-97 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit RM25_RS08705 075829c5b47b3fadea1d24fb3b5a5ca5 470 SUPERFAMILY SSF143548 17 164 1.26E-38 T 22-04-2016 IPR029009 Allosteric substrate binding domain RM25_RS08705 075829c5b47b3fadea1d24fb3b5a5ca5 470 PANTHER PTHR30182 1 466 7.9E-201 T 22-04-2016 RM25_RS08705 075829c5b47b3fadea1d24fb3b5a5ca5 470 Gene3D G3DSA:3.30.1330.90 11 164 1.4E-47 T 22-04-2016 IPR029009 Allosteric substrate binding domain RM25_RS08705 075829c5b47b3fadea1d24fb3b5a5ca5 470 Pfam PF03315 Serine dehydratase beta chain 4 164 2.4E-53 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 RM25_RS06150 a64a1bdb950c0100e67bbd5fe6d8b475 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 159 170 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS06150 a64a1bdb950c0100e67bbd5fe6d8b475 252 SUPERFAMILY SSF46548 135 239 7.15E-18 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RM25_RS06150 a64a1bdb950c0100e67bbd5fe6d8b475 252 Pfam PF12838 4Fe-4S dicluster domain 158 227 4.0E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RM25_RS06150 a64a1bdb950c0100e67bbd5fe6d8b475 252 PANTHER PTHR11921:SF13 4 245 3.4E-72 T 22-04-2016 RM25_RS06150 a64a1bdb950c0100e67bbd5fe6d8b475 252 Gene3D G3DSA:1.10.1060.10 111 238 2.3E-17 T 22-04-2016 RM25_RS06150 a64a1bdb950c0100e67bbd5fe6d8b475 252 PANTHER PTHR11921 4 245 3.4E-72 T 22-04-2016 RM25_RS06150 a64a1bdb950c0100e67bbd5fe6d8b475 252 SUPERFAMILY SSF54292 1 116 2.64E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RM25_RS06150 a64a1bdb950c0100e67bbd5fe6d8b475 252 Gene3D G3DSA:3.10.20.30 1 110 1.7E-22 T 22-04-2016 IPR012675 Beta-grasp domain RM25_RS06150 a64a1bdb950c0100e67bbd5fe6d8b475 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 120 1.8E-23 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RM25_RS00515 bd5595af6462f66ecc286faa34efa2e3 190 Pfam PF00857 Isochorismatase family 5 189 1.5E-30 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RM25_RS00515 bd5595af6462f66ecc286faa34efa2e3 190 Gene3D G3DSA:3.40.50.850 2 189 5.0E-51 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RM25_RS00515 bd5595af6462f66ecc286faa34efa2e3 190 SUPERFAMILY SSF52499 3 189 2.35E-45 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RM25_RS00515 bd5595af6462f66ecc286faa34efa2e3 190 PANTHER PTHR11080 5 189 2.0E-41 T 22-04-2016 RM25_RS04415 48a7e4638fbb54a802c7a63b9eebd0c6 317 SUPERFAMILY SSF100950 61 313 3.72E-63 T 22-04-2016 RM25_RS04415 48a7e4638fbb54a802c7a63b9eebd0c6 317 PANTHER PTHR34294 1 317 2.8E-70 T 22-04-2016 RM25_RS04415 48a7e4638fbb54a802c7a63b9eebd0c6 317 Gene3D G3DSA:3.40.50.1360 54 315 4.3E-78 T 22-04-2016 RM25_RS04415 48a7e4638fbb54a802c7a63b9eebd0c6 317 Pfam PF13518 Helix-turn-helix domain 11 48 4.4E-7 T 22-04-2016 RM25_RS04415 48a7e4638fbb54a802c7a63b9eebd0c6 317 Pfam PF04198 Putative sugar-binding domain 61 311 6.5E-59 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 RM25_RS04415 48a7e4638fbb54a802c7a63b9eebd0c6 317 Gene3D G3DSA:1.10.10.60 17 41 6.2E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS04415 48a7e4638fbb54a802c7a63b9eebd0c6 317 SUPERFAMILY SSF46689 10 83 1.79E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS04550 0178003175bf2ae6f3c320d4e51024e0 357 Pfam PF13409 Glutathione S-transferase, N-terminal domain 64 157 6.1E-9 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RM25_RS04550 0178003175bf2ae6f3c320d4e51024e0 357 Gene3D G3DSA:3.40.30.10 46 172 4.1E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS04550 0178003175bf2ae6f3c320d4e51024e0 357 Gene3D G3DSA:1.20.1050.10 173 288 3.4E-13 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RM25_RS04550 0178003175bf2ae6f3c320d4e51024e0 357 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 279 2.4E-9 T 22-04-2016 RM25_RS04550 0178003175bf2ae6f3c320d4e51024e0 357 PANTHER PTHR32419 1 289 5.7E-72 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 RM25_RS04550 0178003175bf2ae6f3c320d4e51024e0 357 SUPERFAMILY SSF52833 47 160 1.42E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS04550 0178003175bf2ae6f3c320d4e51024e0 357 PANTHER PTHR32419:SF6 1 289 5.7E-72 T 22-04-2016 RM25_RS04550 0178003175bf2ae6f3c320d4e51024e0 357 SUPERFAMILY SSF47616 166 289 3.96E-20 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RM25_RS11800 29df73471bb3ecfba34ee0ed55ca7bc5 201 Gene3D G3DSA:1.10.10.60 10 54 2.7E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS11800 29df73471bb3ecfba34ee0ed55ca7bc5 201 PANTHER PTHR30055:SF10 2 169 1.6E-15 T 22-04-2016 RM25_RS11800 29df73471bb3ecfba34ee0ed55ca7bc5 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 1.6E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS11800 29df73471bb3ecfba34ee0ed55ca7bc5 201 Gene3D G3DSA:1.10.357.10 55 192 9.8E-13 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS11800 29df73471bb3ecfba34ee0ed55ca7bc5 201 SUPERFAMILY SSF46689 11 68 4.99E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS11800 29df73471bb3ecfba34ee0ed55ca7bc5 201 PANTHER PTHR30055 2 169 1.6E-15 T 22-04-2016 RM25_RS03485 ef4d9bff2c89374aadbf32d0da4de960 350 PANTHER PTHR36115 178 349 8.4E-17 T 22-04-2016 RM25_RS03485 ef4d9bff2c89374aadbf32d0da4de960 350 Pfam PF10708 Protein of unknown function (DUF2510) 54 86 3.3E-13 T 22-04-2016 IPR018929 Domain of unknown function DUF2510 RM25_RS03485 ef4d9bff2c89374aadbf32d0da4de960 350 Pfam PF10708 Protein of unknown function (DUF2510) 24 54 2.4E-9 T 22-04-2016 IPR018929 Domain of unknown function DUF2510 RM25_RS03485 ef4d9bff2c89374aadbf32d0da4de960 350 PANTHER PTHR36115:SF3 178 349 8.4E-17 T 22-04-2016 RM25_RS03485 ef4d9bff2c89374aadbf32d0da4de960 350 Pfam PF06271 RDD family 180 341 2.1E-24 T 22-04-2016 IPR010432 RDD RM25_RS05370 484f048abc7e2a0ddc500acf81c6e1d1 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 278 2.7E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RM25_RS05370 484f048abc7e2a0ddc500acf81c6e1d1 294 PANTHER PTHR11795 2 294 1.1E-130 T 22-04-2016 RM25_RS05370 484f048abc7e2a0ddc500acf81c6e1d1 294 PANTHER PTHR11795:SF371 2 294 1.1E-130 T 22-04-2016 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 SUPERFAMILY SSF50447 641 725 2.55E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 2 51 1.3E-12 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 386 431 2.1E-7 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 PRINTS PR00315 GTP-binding elongation factor signature 520 530 1.1E-8 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 PRINTS PR00315 GTP-binding elongation factor signature 572 581 1.1E-8 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 PRINTS PR00315 GTP-binding elongation factor signature 468 481 1.1E-8 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 PRINTS PR00315 GTP-binding elongation factor signature 536 547 1.1E-8 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 PANTHER PTHR23115 822 968 9.4E-192 T 22-04-2016 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 Gene3D G3DSA:2.40.30.10 640 734 2.3E-23 T 22-04-2016 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 PANTHER PTHR23115:SF184 822 968 9.4E-192 T 22-04-2016 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 382 971 8.3E-230 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 PANTHER PTHR23115 446 794 9.4E-192 T 22-04-2016 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 Gene3D G3DSA:3.40.50.300 463 628 6.5E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 PANTHER PTHR23115:SF184 446 794 9.4E-192 T 22-04-2016 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 SUPERFAMILY SSF52156 749 880 5.49E-33 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 SUPERFAMILY SSF50447 874 971 1.58E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 SUPERFAMILY SSF52540 461 631 6.53E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 Pfam PF00009 Elongation factor Tu GTP binding domain 469 629 5.1E-32 T 22-04-2016 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 Pfam PF11987 Translation-initiation factor 2 756 863 2.6E-32 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 971 16.846 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 Gene3D G3DSA:2.40.30.10 874 971 5.7E-37 T 22-04-2016 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 Gene3D G3DSA:3.40.50.10050 772 852 8.4E-21 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RM25_RS06825 8d312c9e4ded3281d5e7e0b5ac13d44f 973 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 467 623 1.2E-28 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RM25_RS10190 d4c52f6c31c5b29e7cae45d6130651bd 114 Gene3D G3DSA:1.10.10.60 18 102 1.4E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10190 d4c52f6c31c5b29e7cae45d6130651bd 114 SUPERFAMILY SSF46689 12 107 9.32E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10190 d4c52f6c31c5b29e7cae45d6130651bd 114 PANTHER PTHR33215 9 113 2.7E-25 T 22-04-2016 RM25_RS10190 d4c52f6c31c5b29e7cae45d6130651bd 114 Pfam PF01527 Transposase 12 94 2.9E-7 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RM25_RS10750 d4c52f6c31c5b29e7cae45d6130651bd 114 Gene3D G3DSA:1.10.10.60 18 102 1.4E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10750 d4c52f6c31c5b29e7cae45d6130651bd 114 SUPERFAMILY SSF46689 12 107 9.32E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10750 d4c52f6c31c5b29e7cae45d6130651bd 114 PANTHER PTHR33215 9 113 2.7E-25 T 22-04-2016 RM25_RS10750 d4c52f6c31c5b29e7cae45d6130651bd 114 Pfam PF01527 Transposase 12 94 2.9E-7 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RM25_RS09090 d4c52f6c31c5b29e7cae45d6130651bd 114 Gene3D G3DSA:1.10.10.60 18 102 1.4E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS09090 d4c52f6c31c5b29e7cae45d6130651bd 114 SUPERFAMILY SSF46689 12 107 9.32E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS09090 d4c52f6c31c5b29e7cae45d6130651bd 114 PANTHER PTHR33215 9 113 2.7E-25 T 22-04-2016 RM25_RS09090 d4c52f6c31c5b29e7cae45d6130651bd 114 Pfam PF01527 Transposase 12 94 2.9E-7 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RM25_RS01560 d4c52f6c31c5b29e7cae45d6130651bd 114 Gene3D G3DSA:1.10.10.60 18 102 1.4E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS01560 d4c52f6c31c5b29e7cae45d6130651bd 114 SUPERFAMILY SSF46689 12 107 9.32E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS01560 d4c52f6c31c5b29e7cae45d6130651bd 114 PANTHER PTHR33215 9 113 2.7E-25 T 22-04-2016 RM25_RS01560 d4c52f6c31c5b29e7cae45d6130651bd 114 Pfam PF01527 Transposase 12 94 2.9E-7 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 SUPERFAMILY SSF50494 9 196 2.9E-49 T 22-04-2016 IPR009003 Peptidase S1, PA clan RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 Pfam PF13180 PDZ domain 209 287 3.7E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 PANTHER PTHR22939 1 289 7.7E-92 T 22-04-2016 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 Gene3D G3DSA:2.40.10.10 88 202 1.3E-41 T 22-04-2016 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 PRINTS PR00834 HtrA/DegQ protease family signature 130 147 5.7E-39 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 PRINTS PR00834 HtrA/DegQ protease family signature 87 111 5.7E-39 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 PRINTS PR00834 HtrA/DegQ protease family signature 236 248 5.7E-39 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 PRINTS PR00834 HtrA/DegQ protease family signature 152 169 5.7E-39 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 PRINTS PR00834 HtrA/DegQ protease family signature 47 67 5.7E-39 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 PRINTS PR00834 HtrA/DegQ protease family signature 24 36 5.7E-39 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 SMART SM00228 200 278 2.4E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 SUPERFAMILY SSF50156 171 288 1.18E-22 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 Gene3D G3DSA:2.30.42.10 203 288 3.7E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 Gene3D G3DSA:2.40.10.10 12 87 9.6E-23 T 22-04-2016 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 Pfam PF13365 Trypsin-like peptidase domain 16 159 2.9E-30 T 22-04-2016 RM25_RS08345 43cf28e09997d45ba3e1a76428195767 290 PANTHER PTHR22939:SF79 1 289 7.7E-92 T 22-04-2016 RM25_RS07865 8feb1c9f1929c2dfdf2bbb8779751ce3 90 PANTHER PTHR32552 6 81 6.6E-12 T 22-04-2016 RM25_RS07865 8feb1c9f1929c2dfdf2bbb8779751ce3 90 Pfam PF13683 Integrase core domain 10 75 1.8E-13 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS07865 8feb1c9f1929c2dfdf2bbb8779751ce3 90 SUPERFAMILY SSF53098 3 84 1.54E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS07865 8feb1c9f1929c2dfdf2bbb8779751ce3 90 Gene3D G3DSA:3.30.420.10 3 75 3.7E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS02945 9006772470363562b4031d07cefb26b3 433 Gene3D G3DSA:3.90.70.10 53 432 3.0E-142 T 22-04-2016 RM25_RS02945 9006772470363562b4031d07cefb26b3 433 Pfam PF03051 Peptidase C1-like family 7 433 1.4E-135 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 RM25_RS02945 9006772470363562b4031d07cefb26b3 433 SUPERFAMILY SSF54001 21 432 2.14E-99 T 22-04-2016 RM25_RS02945 9006772470363562b4031d07cefb26b3 433 PANTHER PTHR10363 12 432 1.2E-147 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 RM25_RS02945 9006772470363562b4031d07cefb26b3 433 PIRSF PIRSF005700 2 433 5.1E-140 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 RM25_RS02945 9006772470363562b4031d07cefb26b3 433 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 61 72 - T 22-04-2016 IPR000169 Cysteine peptidase, cysteine active site RM25_RS02945 9006772470363562b4031d07cefb26b3 433 PANTHER PTHR10363:SF2 12 432 1.2E-147 T 22-04-2016 RM25_RS08630 24c4ad849fcd36d8aa5a29550946ab0d 94 PANTHER PTHR33609 5 92 8.3E-19 T 22-04-2016 RM25_RS08630 24c4ad849fcd36d8aa5a29550946ab0d 94 Gene3D G3DSA:1.10.10.60 24 90 4.1E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS08630 24c4ad849fcd36d8aa5a29550946ab0d 94 SUPERFAMILY SSF46689 5 79 2.51E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS08630 24c4ad849fcd36d8aa5a29550946ab0d 94 Pfam PF01527 Transposase 4 77 1.5E-14 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RM25_RS06915 190c865316358a4b7ea9c5335d26f531 206 Hamap MF_00163 Peptide deformylase [def]. 12 178 25.038 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RM25_RS06915 190c865316358a4b7ea9c5335d26f531 206 PRINTS PR01576 Peptide deformylase signature 43 72 8.8E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RM25_RS06915 190c865316358a4b7ea9c5335d26f531 206 PRINTS PR01576 Peptide deformylase signature 105 116 8.8E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RM25_RS06915 190c865316358a4b7ea9c5335d26f531 206 PRINTS PR01576 Peptide deformylase signature 136 165 8.8E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RM25_RS06915 190c865316358a4b7ea9c5335d26f531 206 PRINTS PR01576 Peptide deformylase signature 117 135 8.8E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RM25_RS06915 190c865316358a4b7ea9c5335d26f531 206 PANTHER PTHR10458 13 192 5.2E-49 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RM25_RS06915 190c865316358a4b7ea9c5335d26f531 206 Gene3D G3DSA:3.90.45.10 15 179 8.4E-53 T 22-04-2016 IPR023635 Peptide deformylase RM25_RS06915 190c865316358a4b7ea9c5335d26f531 206 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 15 175 2.6E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RM25_RS06915 190c865316358a4b7ea9c5335d26f531 206 SUPERFAMILY SSF56420 12 174 1.83E-50 T 22-04-2016 IPR023635 Peptide deformylase RM25_RS06915 190c865316358a4b7ea9c5335d26f531 206 Pfam PF01327 Polypeptide deformylase 14 167 1.4E-40 T 22-04-2016 IPR023635 Peptide deformylase RM25_RS06915 190c865316358a4b7ea9c5335d26f531 206 PIRSF PIRSF004749 4 188 6.7E-42 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RM25_RS02545 58d42aff09770e181c1d7bffc83c3230 131 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 75 131 3.0E-17 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RM25_RS02545 58d42aff09770e181c1d7bffc83c3230 131 SUPERFAMILY SSF48300 4 51 2.09E-13 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02545 58d42aff09770e181c1d7bffc83c3230 131 Gene3D G3DSA:3.30.1390.10 61 131 1.0E-27 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RM25_RS02545 58d42aff09770e181c1d7bffc83c3230 131 Gene3D G3DSA:1.20.5.710 3 52 2.7E-19 T 22-04-2016 RM25_RS02545 58d42aff09770e181c1d7bffc83c3230 131 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 131 2.2E-40 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02545 58d42aff09770e181c1d7bffc83c3230 131 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 64 131 1.0E-25 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RM25_RS02545 58d42aff09770e181c1d7bffc83c3230 131 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 6 51 1.0E-17 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02545 58d42aff09770e181c1d7bffc83c3230 131 SUPERFAMILY SSF54736 63 130 6.45E-21 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RM25_RS02545 58d42aff09770e181c1d7bffc83c3230 131 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 131 22.013 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 SUPERFAMILY SSF53335 12 50 1.96E-123 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 SUPERFAMILY SSF53335 87 518 1.96E-123 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 218 1.6E-17 T 22-04-2016 RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 228 242 1.6E-17 T 22-04-2016 RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 339 363 1.6E-17 T 22-04-2016 RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 301 313 1.6E-17 T 22-04-2016 RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 PANTHER PTHR30408 176 506 1.6E-120 T 22-04-2016 RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 Pfam PF02384 N-6 DNA Methylase 179 486 3.8E-109 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 9 508 7.9E-218 T 22-04-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 Gene3D G3DSA:3.40.50.150 204 428 2.2E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 PANTHER PTHR30408:SF4 176 506 1.6E-120 T 22-04-2016 RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 304 310 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RM25_RS00665 edd97fb30894e752374d97fb674742b7 522 Pfam PF12161 HsdM N-terminal domain 13 165 1.6E-21 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RM25_RS00885 17be960634227bffd9543e985b7d18cc 377 PIRSF PIRSF000267 13 369 1.2E-116 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RM25_RS00885 17be960634227bffd9543e985b7d18cc 377 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 18 354 3.7E-99 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RM25_RS00885 17be960634227bffd9543e985b7d18cc 377 PANTHER PTHR30365 11 377 1.1E-118 T 22-04-2016 RM25_RS00885 17be960634227bffd9543e985b7d18cc 377 PANTHER PTHR30365:SF6 11 377 1.1E-118 T 22-04-2016 RM25_RS00885 17be960634227bffd9543e985b7d18cc 377 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 13 241 4.2E-75 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RM25_RS00550 8af77d26e4c554eb8cd50504d8def441 157 SUPERFAMILY SSF46785 2 118 5.93E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS00550 8af77d26e4c554eb8cd50504d8def441 157 Pfam PF03551 Transcriptional regulator PadR-like family 5 76 5.6E-18 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal RM25_RS00550 8af77d26e4c554eb8cd50504d8def441 157 PANTHER PTHR33169 1 96 9.6E-21 T 22-04-2016 RM25_RS00550 8af77d26e4c554eb8cd50504d8def441 157 Gene3D G3DSA:1.10.10.10 2 92 3.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS00550 8af77d26e4c554eb8cd50504d8def441 157 PANTHER PTHR33169:SF11 1 96 9.6E-21 T 22-04-2016 RM25_RS01710 69933800da0e69958df56a1aaf94b15e 95 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 23 92 6.5E-21 T 22-04-2016 IPR018720 Domain of unknown function DUF2249 RM25_RS02150 345d2c8ed7716bb9edb375b7a82310d6 89 PANTHER PTHR34875 1 89 7.5E-22 T 22-04-2016 RM25_RS02150 345d2c8ed7716bb9edb375b7a82310d6 89 Gene3D G3DSA:3.30.70.260 2 88 9.9E-26 T 22-04-2016 RM25_RS02150 345d2c8ed7716bb9edb375b7a82310d6 89 SUPERFAMILY SSF55021 1 83 9.4E-18 T 22-04-2016 RM25_RS02150 345d2c8ed7716bb9edb375b7a82310d6 89 Pfam PF13740 ACT domain 3 78 6.2E-13 T 22-04-2016 RM25_RS02150 345d2c8ed7716bb9edb375b7a82310d6 89 Hamap MF_01054 UPF0237 protein . 1 89 22.932 T 22-04-2016 IPR022986 Uncharacterised protein family UPF0237, ACT-type RM25_RS00910 bf2280014c42ebd67afe3d2a383c4409 105 Gene3D G3DSA:3.30.70.930 1 99 1.9E-33 T 22-04-2016 IPR029756 MTH1187/YkoF-like RM25_RS00910 bf2280014c42ebd67afe3d2a383c4409 105 PANTHER PTHR33777:SF1 1 105 2.6E-24 T 22-04-2016 RM25_RS00910 bf2280014c42ebd67afe3d2a383c4409 105 Pfam PF01910 Thiamine-binding protein 3 94 3.3E-26 T 22-04-2016 IPR002767 Thiamine-binding protein RM25_RS00910 bf2280014c42ebd67afe3d2a383c4409 105 PANTHER PTHR33777 1 105 2.6E-24 T 22-04-2016 RM25_RS00910 bf2280014c42ebd67afe3d2a383c4409 105 SUPERFAMILY SSF89957 1 98 1.24E-25 T 22-04-2016 IPR029756 MTH1187/YkoF-like RM25_RS01185 f20aa24f3e413911e63d3202e10b433c 321 PANTHER PTHR30472 1 321 1.5E-106 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RM25_RS01185 f20aa24f3e413911e63d3202e10b433c 321 PANTHER PTHR30472:SF24 1 321 1.5E-106 T 22-04-2016 RM25_RS01185 f20aa24f3e413911e63d3202e10b433c 321 Gene3D G3DSA:1.10.3470.10 3 319 4.9E-76 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RM25_RS01185 f20aa24f3e413911e63d3202e10b433c 321 Pfam PF01032 FecCD transport family 12 316 1.6E-70 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RM25_RS01185 f20aa24f3e413911e63d3202e10b433c 321 SUPERFAMILY SSF81345 3 316 2.62E-61 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RM25_RS02025 7cbb5b66e791bf657454959fa17097c1 423 Pfam PF01384 Phosphate transporter family 20 158 2.2E-34 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RM25_RS02025 7cbb5b66e791bf657454959fa17097c1 423 Pfam PF01384 Phosphate transporter family 165 317 1.6E-41 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RM25_RS02025 7cbb5b66e791bf657454959fa17097c1 423 PANTHER PTHR11101:SF54 1 353 2.1E-125 T 22-04-2016 RM25_RS02025 7cbb5b66e791bf657454959fa17097c1 423 PANTHER PTHR11101 1 353 2.1E-125 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RM25_RS01675 54ef4cabd08b4f28747d21e1ebedca6c 533 PANTHER PTHR34353 187 533 5.8E-76 T 22-04-2016 RM25_RS01675 54ef4cabd08b4f28747d21e1ebedca6c 533 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 8 184 2.8E-25 T 22-04-2016 IPR013343 CRISPR-associated protein Cas4 RM25_RS01675 54ef4cabd08b4f28747d21e1ebedca6c 533 Pfam PF01930 Domain of unknown function DUF83 9 184 1.1E-22 T 22-04-2016 IPR022765 Dna2/Cas4, domain of unknown function DUF83 RM25_RS01675 54ef4cabd08b4f28747d21e1ebedca6c 533 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 211 524 5.2E-67 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 RM25_RS01675 54ef4cabd08b4f28747d21e1ebedca6c 533 PANTHER PTHR34353:SF2 187 533 5.8E-76 T 22-04-2016 RM25_RS01675 54ef4cabd08b4f28747d21e1ebedca6c 533 Pfam PF01867 CRISPR associated protein Cas1 211 487 1.0E-71 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 RM25_RS01675 54ef4cabd08b4f28747d21e1ebedca6c 533 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 207 530 18.92 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 RM25_RS07385 2b0d6754f3c9e096933391f11566f1eb 365 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 223 326 7.5E-15 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RM25_RS07385 2b0d6754f3c9e096933391f11566f1eb 365 PANTHER PTHR13256 2 201 7.4E-25 T 22-04-2016 RM25_RS07385 2b0d6754f3c9e096933391f11566f1eb 365 Pfam PF13302 Acetyltransferase (GNAT) domain 11 154 1.3E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS07385 2b0d6754f3c9e096933391f11566f1eb 365 SUPERFAMILY SSF101386 245 330 2.43E-5 T 22-04-2016 RM25_RS07385 2b0d6754f3c9e096933391f11566f1eb 365 PANTHER PTHR13256:SF21 2 201 7.4E-25 T 22-04-2016 RM25_RS07385 2b0d6754f3c9e096933391f11566f1eb 365 Gene3D G3DSA:3.40.630.30 2 178 2.7E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS07385 2b0d6754f3c9e096933391f11566f1eb 365 Gene3D G3DSA:1.10.3420.10 218 360 5.0E-45 T 22-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain RM25_RS07385 2b0d6754f3c9e096933391f11566f1eb 365 SUPERFAMILY SSF55729 2 178 2.17E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS01685 eb24c410b5ba323456f8e1c63e23b38d 871 SUPERFAMILY SSF52540 131 234 5.52E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01685 eb24c410b5ba323456f8e1c63e23b38d 871 SUPERFAMILY SSF52540 42 94 5.52E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01685 eb24c410b5ba323456f8e1c63e23b38d 871 SUPERFAMILY SSF52540 261 401 5.52E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01685 eb24c410b5ba323456f8e1c63e23b38d 871 Gene3D G3DSA:3.40.50.300 20 232 1.4E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01685 eb24c410b5ba323456f8e1c63e23b38d 871 Gene3D G3DSA:3.40.50.300 350 413 2.3E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01685 eb24c410b5ba323456f8e1c63e23b38d 871 TIGRFAM TIGR02621 cas3_GSU0051: CRISPR-associated helicase Cas3, subtype Dpsyc 7 506 2.3E-73 T 22-04-2016 IPR013444 Helicase Cas3, CRISPR-associated, Anaes-subtype RM25_RS06375 6f91df6dd7a53aae3d03e15b0c37ce58 354 PANTHER PTHR10516 226 346 7.6E-16 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RM25_RS06375 6f91df6dd7a53aae3d03e15b0c37ce58 354 PANTHER PTHR10516 39 203 7.6E-16 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RM25_RS06375 6f91df6dd7a53aae3d03e15b0c37ce58 354 PANTHER PTHR10516:SF320 226 346 7.6E-16 T 22-04-2016 RM25_RS06375 6f91df6dd7a53aae3d03e15b0c37ce58 354 PANTHER PTHR10516:SF320 39 203 7.6E-16 T 22-04-2016 RM25_RS06375 6f91df6dd7a53aae3d03e15b0c37ce58 354 SUPERFAMILY SSF54534 89 204 1.69E-20 T 22-04-2016 RM25_RS06375 6f91df6dd7a53aae3d03e15b0c37ce58 354 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 202 7.7E-11 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RM25_RS06375 6f91df6dd7a53aae3d03e15b0c37ce58 354 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 257 346 5.1E-10 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RM25_RS06375 6f91df6dd7a53aae3d03e15b0c37ce58 354 Gene3D G3DSA:3.10.50.40 87 212 9.5E-18 T 22-04-2016 RM25_RS06375 6f91df6dd7a53aae3d03e15b0c37ce58 354 Gene3D G3DSA:3.10.50.40 239 346 2.6E-17 T 22-04-2016 RM25_RS06375 6f91df6dd7a53aae3d03e15b0c37ce58 354 SUPERFAMILY SSF54534 234 346 1.55E-21 T 22-04-2016 RM25_RS00780 cf7643213c91779a3d9ac29533518e17 872 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 535 725 7.6E-20 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain RM25_RS00780 cf7643213c91779a3d9ac29533518e17 872 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 535 725 1.1E-21 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain RM25_RS00780 cf7643213c91779a3d9ac29533518e17 872 PANTHER PTHR33392 395 573 7.2E-31 T 22-04-2016 RM25_RS00780 cf7643213c91779a3d9ac29533518e17 872 PANTHER PTHR33392 592 812 7.2E-31 T 22-04-2016 RM25_RS00360 f3481980e2b5854b6e5184e68e310060 285 Pfam PF00535 Glycosyl transferase family 2 5 147 7.4E-14 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RM25_RS00360 f3481980e2b5854b6e5184e68e310060 285 SUPERFAMILY SSF53448 4 225 1.17E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS00360 f3481980e2b5854b6e5184e68e310060 285 PANTHER PTHR22916:SF27 4 280 2.0E-60 T 22-04-2016 RM25_RS00360 f3481980e2b5854b6e5184e68e310060 285 PANTHER PTHR22916 4 280 2.0E-60 T 22-04-2016 RM25_RS00360 f3481980e2b5854b6e5184e68e310060 285 Gene3D G3DSA:3.90.550.10 4 226 3.5E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS02690 6a4a81731672b9573051c7b547efe0a8 127 SUPERFAMILY SSF53137 14 125 1.7E-46 T 22-04-2016 RM25_RS02690 6a4a81731672b9573051c7b547efe0a8 127 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 13 126 9.3E-47 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02690 6a4a81731672b9573051c7b547efe0a8 127 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 13 127 26.328 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02690 6a4a81731672b9573051c7b547efe0a8 127 PANTHER PTHR12899 3 127 1.2E-37 T 22-04-2016 RM25_RS02690 6a4a81731672b9573051c7b547efe0a8 127 Gene3D G3DSA:3.30.420.100 32 125 6.6E-38 T 22-04-2016 RM25_RS02690 6a4a81731672b9573051c7b547efe0a8 127 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 14 126 8.3E-38 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS09930 50ec39993fcb6d08b9fb19e311b1af6f 109 PANTHER PTHR33215:SF1 1 108 2.0E-12 T 22-04-2016 RM25_RS09930 50ec39993fcb6d08b9fb19e311b1af6f 109 Pfam PF01527 Transposase 3 80 1.5E-10 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RM25_RS09930 50ec39993fcb6d08b9fb19e311b1af6f 109 Gene3D G3DSA:1.10.10.60 7 102 8.1E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS09930 50ec39993fcb6d08b9fb19e311b1af6f 109 PANTHER PTHR33215 1 108 2.0E-12 T 22-04-2016 RM25_RS09930 50ec39993fcb6d08b9fb19e311b1af6f 109 SUPERFAMILY SSF46689 1 106 2.24E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS05460 50ec39993fcb6d08b9fb19e311b1af6f 109 PANTHER PTHR33215:SF1 1 108 2.0E-12 T 22-04-2016 RM25_RS05460 50ec39993fcb6d08b9fb19e311b1af6f 109 Pfam PF01527 Transposase 3 80 1.5E-10 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RM25_RS05460 50ec39993fcb6d08b9fb19e311b1af6f 109 Gene3D G3DSA:1.10.10.60 7 102 8.1E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS05460 50ec39993fcb6d08b9fb19e311b1af6f 109 PANTHER PTHR33215 1 108 2.0E-12 T 22-04-2016 RM25_RS05460 50ec39993fcb6d08b9fb19e311b1af6f 109 SUPERFAMILY SSF46689 1 106 2.24E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS02885 fe8b22108caa3d29f2b591e0b74651cf 360 PANTHER PTHR10285:SF7 45 305 4.4E-111 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RM25_RS02885 fe8b22108caa3d29f2b591e0b74651cf 360 PANTHER PTHR10285:SF7 321 360 4.4E-111 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RM25_RS02885 fe8b22108caa3d29f2b591e0b74651cf 360 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 134 277 7.1E-7 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 RM25_RS02885 fe8b22108caa3d29f2b591e0b74651cf 360 PIRSF PIRSF000545 47 360 5.7E-116 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RM25_RS02885 fe8b22108caa3d29f2b591e0b74651cf 360 Hamap MF_00215 Pantothenate kinase [coaA]. 1 360 128.301 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RM25_RS02885 fe8b22108caa3d29f2b591e0b74651cf 360 SUPERFAMILY SSF52540 55 358 1.78E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02885 fe8b22108caa3d29f2b591e0b74651cf 360 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 55 359 5.6E-99 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RM25_RS02885 fe8b22108caa3d29f2b591e0b74651cf 360 Gene3D G3DSA:3.40.50.300 55 359 8.6E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02885 fe8b22108caa3d29f2b591e0b74651cf 360 PANTHER PTHR10285 45 305 4.4E-111 T 22-04-2016 RM25_RS02885 fe8b22108caa3d29f2b591e0b74651cf 360 PANTHER PTHR10285 321 360 4.4E-111 T 22-04-2016 RM25_RS05075 abc5db3c10f9c3b3713fa22343c4606f 226 PANTHER PTHR35524 1 225 1.6E-69 T 22-04-2016 RM25_RS05075 abc5db3c10f9c3b3713fa22343c4606f 226 Gene3D G3DSA:3.30.1330.80 74 191 6.3E-36 T 22-04-2016 RM25_RS05075 abc5db3c10f9c3b3713fa22343c4606f 226 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 1 224 1.3E-64 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 RM25_RS05075 abc5db3c10f9c3b3713fa22343c4606f 226 PIRSF PIRSF001332 1 225 1.6E-69 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 RM25_RS05075 abc5db3c10f9c3b3713fa22343c4606f 226 SUPERFAMILY SSF117856 1 224 1.41E-66 T 22-04-2016 RM25_RS05075 abc5db3c10f9c3b3713fa22343c4606f 226 Pfam PF03306 Alpha-acetolactate decarboxylase 1 212 4.9E-70 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 2 430 1.8E-207 T 22-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 PRINTS PR00149 Fumarate lyase superfamily signature 98 116 8.9E-29 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 8.9E-29 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 PRINTS PR00149 Fumarate lyase superfamily signature 234 261 8.9E-29 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 8.9E-29 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 Gene3D G3DSA:1.20.200.10 103 364 1.6E-86 T 22-04-2016 RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 Pfam PF00206 Lyase 8 305 1.1E-96 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 PANTHER PTHR11444 1 449 7.1E-235 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 Gene3D G3DSA:1.10.40.30 371 418 2.3E-16 T 22-04-2016 RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 Gene3D G3DSA:1.10.275.10 3 102 1.6E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 SUPERFAMILY SSF48557 5 417 1.62E-128 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 Pfam PF10415 Fumarase C C-terminus 371 420 8.0E-15 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 PRINTS PR00145 Argininosuccinate lyase family signature 138 158 3.9E-5 T 22-04-2016 RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 PRINTS PR00145 Argininosuccinate lyase family signature 97 119 3.9E-5 T 22-04-2016 RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 PRINTS PR00145 Argininosuccinate lyase family signature 280 296 3.9E-5 T 22-04-2016 RM25_RS07645 1b550b918bfb173da7390ab1bdb67607 452 PANTHER PTHR11444:SF25 1 449 7.1E-235 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 PANTHER PTHR24031 29 75 1.2E-66 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 PANTHER PTHR24031 1113 1128 1.2E-66 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 PANTHER PTHR24031 99 258 1.2E-66 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 PANTHER PTHR24031 292 330 1.2E-66 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 PANTHER PTHR24031 679 708 1.2E-66 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 PANTHER PTHR24031 364 448 1.2E-66 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 Pfam PF00270 DEAD/DEAH box helicase 33 233 1.3E-25 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 SMART SM00487 28 265 2.3E-32 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 Gene3D G3DSA:3.40.50.300 19 241 2.4E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 SMART SM00490 320 431 1.3E-11 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 Gene3D G3DSA:3.40.50.300 299 328 2.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 Gene3D G3DSA:3.40.50.300 362 478 2.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 Pfam PF00271 Helicase conserved C-terminal domain 363 431 7.0E-12 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 SUPERFAMILY SSF52540 274 328 2.91E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 SUPERFAMILY SSF52540 362 435 2.91E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 SUPERFAMILY SSF52540 41 235 2.91E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 PANTHER PTHR24031:SF122 29 75 1.2E-66 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 PANTHER PTHR24031:SF122 1113 1128 1.2E-66 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 PANTHER PTHR24031:SF122 99 258 1.2E-66 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 PANTHER PTHR24031:SF122 292 330 1.2E-66 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 PANTHER PTHR24031:SF122 679 708 1.2E-66 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 PANTHER PTHR24031:SF122 364 448 1.2E-66 T 22-04-2016 RM25_RS04320 a41d8a342f4c8f80bd43f22a07bea6b9 1559 Pfam PF08494 DEAD/H associated 699 887 1.9E-68 T 22-04-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 PANTHER PTHR13370:SF4 38 218 1.7E-13 T 22-04-2016 RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 PANTHER PTHR13370 38 218 1.7E-13 T 22-04-2016 RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 SUPERFAMILY SSF53335 36 223 1.16E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 SUPERFAMILY SSF53335 333 367 1.16E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 Pfam PF01555 DNA methylase 53 222 1.3E-29 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 Pfam PF01555 DNA methylase 328 363 5.3E-7 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 57 62 - T 22-04-2016 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 331 349 3.4E-21 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 90 110 3.4E-21 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 203 220 3.4E-21 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 52 66 3.4E-21 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 Gene3D G3DSA:3.40.50.150 333 363 2.0E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09905 dbdcd2859d63b408039dcf33c79ab607 388 Gene3D G3DSA:3.40.50.150 29 223 2.0E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS06075 4a8f97bbf9e5c0ae79c3cbce649f1d5e 419 PIRSF PIRSF000447 1 416 1.0E-139 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RM25_RS06075 4a8f97bbf9e5c0ae79c3cbce649f1d5e 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 3.0E-35 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RM25_RS06075 4a8f97bbf9e5c0ae79c3cbce649f1d5e 419 SUPERFAMILY SSF53901 215 414 3.04E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS06075 4a8f97bbf9e5c0ae79c3cbce649f1d5e 419 SMART SM00825 Beta-ketoacyl synthase 4 406 6.5E-16 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RM25_RS06075 4a8f97bbf9e5c0ae79c3cbce649f1d5e 419 SUPERFAMILY SSF53901 1 252 1.09E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS06075 4a8f97bbf9e5c0ae79c3cbce649f1d5e 419 PANTHER PTHR11712 4 410 4.4E-153 T 22-04-2016 RM25_RS06075 4a8f97bbf9e5c0ae79c3cbce649f1d5e 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 247 7.9E-56 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RM25_RS06075 4a8f97bbf9e5c0ae79c3cbce649f1d5e 419 Gene3D G3DSA:3.40.47.10 264 413 2.5E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS06075 4a8f97bbf9e5c0ae79c3cbce649f1d5e 419 Gene3D G3DSA:3.40.47.10 2 257 4.6E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RM25_RS03180 8f7e1ce3771efc5820583000e5eb0350 405 PIRSF PIRSF000108 1 405 5.7E-221 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RM25_RS03180 8f7e1ce3771efc5820583000e5eb0350 405 Gene3D G3DSA:3.40.718.10 3 403 4.9E-169 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RM25_RS03180 8f7e1ce3771efc5820583000e5eb0350 405 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 3 402 1.7E-209 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RM25_RS03180 8f7e1ce3771efc5820583000e5eb0350 405 SMART SM01329 9 396 3.4E-142 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RM25_RS03180 8f7e1ce3771efc5820583000e5eb0350 405 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 271 290 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RM25_RS03180 8f7e1ce3771efc5820583000e5eb0350 405 SUPERFAMILY SSF53659 1 403 2.7E-151 T 22-04-2016 RM25_RS03180 8f7e1ce3771efc5820583000e5eb0350 405 PANTHER PTHR11822 1 404 0.0 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RM25_RS03180 8f7e1ce3771efc5820583000e5eb0350 405 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 11 395 8.2E-72 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RM25_RS10130 195087c32eeaa7deac9cd34f55cb9cb3 435 PANTHER PTHR33498:SF1 45 434 3.8E-23 T 22-04-2016 RM25_RS10130 195087c32eeaa7deac9cd34f55cb9cb3 435 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 88 1.1E-6 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS10130 195087c32eeaa7deac9cd34f55cb9cb3 435 Pfam PF01610 Transposase 164 419 1.1E-62 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS10130 195087c32eeaa7deac9cd34f55cb9cb3 435 PANTHER PTHR33498 45 434 3.8E-23 T 22-04-2016 RM25_RS00585 195087c32eeaa7deac9cd34f55cb9cb3 435 PANTHER PTHR33498:SF1 45 434 3.8E-23 T 22-04-2016 RM25_RS00585 195087c32eeaa7deac9cd34f55cb9cb3 435 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 88 1.1E-6 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS00585 195087c32eeaa7deac9cd34f55cb9cb3 435 Pfam PF01610 Transposase 164 419 1.1E-62 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS00585 195087c32eeaa7deac9cd34f55cb9cb3 435 PANTHER PTHR33498 45 434 3.8E-23 T 22-04-2016 RM25_RS01665 195087c32eeaa7deac9cd34f55cb9cb3 435 PANTHER PTHR33498:SF1 45 434 3.8E-23 T 22-04-2016 RM25_RS01665 195087c32eeaa7deac9cd34f55cb9cb3 435 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 88 1.1E-6 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS01665 195087c32eeaa7deac9cd34f55cb9cb3 435 Pfam PF01610 Transposase 164 419 1.1E-62 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS01665 195087c32eeaa7deac9cd34f55cb9cb3 435 PANTHER PTHR33498 45 434 3.8E-23 T 22-04-2016 RM25_RS03955 662214317983fbdc831cf37ae9b169a9 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 2 100 3.6E-32 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RM25_RS03955 662214317983fbdc831cf37ae9b169a9 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 9.9E-25 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS03955 662214317983fbdc831cf37ae9b169a9 102 PANTHER PTHR21349 1 101 1.2E-31 T 22-04-2016 RM25_RS03955 662214317983fbdc831cf37ae9b169a9 102 SUPERFAMILY SSF141091 1 100 9.94E-30 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RM25_RS03955 662214317983fbdc831cf37ae9b169a9 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 21.717 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS00815 ada66a24c72a921e5d814f90dd2b433e 349 PANTHER PTHR30344 249 328 6.2E-23 T 22-04-2016 RM25_RS00815 ada66a24c72a921e5d814f90dd2b433e 349 PANTHER PTHR30344 16 231 6.2E-23 T 22-04-2016 RM25_RS00815 ada66a24c72a921e5d814f90dd2b433e 349 Gene3D G3DSA:2.130.10.10 4 328 2.5E-45 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RM25_RS00815 ada66a24c72a921e5d814f90dd2b433e 349 SUPERFAMILY SSF50974 246 308 3.4E-25 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal RM25_RS00815 ada66a24c72a921e5d814f90dd2b433e 349 SUPERFAMILY SSF50974 5 209 3.4E-25 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal RM25_RS00815 ada66a24c72a921e5d814f90dd2b433e 349 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 328 3.3E-38 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RM25_RS00680 4c4f37e2c28f3c8e3763259b4b9d9ce1 329 SUPERFAMILY SSF51735 1 126 1.17E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00680 4c4f37e2c28f3c8e3763259b4b9d9ce1 329 Gene3D G3DSA:1.10.1040.10 192 310 7.0E-34 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RM25_RS00680 4c4f37e2c28f3c8e3763259b4b9d9ce1 329 Gene3D G3DSA:3.40.50.720 1 191 2.3E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00680 4c4f37e2c28f3c8e3763259b4b9d9ce1 329 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 144 1.9E-25 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RM25_RS00680 4c4f37e2c28f3c8e3763259b4b9d9ce1 329 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 311 7.4E-55 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RM25_RS00680 4c4f37e2c28f3c8e3763259b4b9d9ce1 329 SUPERFAMILY SSF48179 183 310 2.18E-26 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RM25_RS00680 4c4f37e2c28f3c8e3763259b4b9d9ce1 329 PANTHER PTHR21708:SF24 1 304 8.3E-45 T 22-04-2016 RM25_RS00680 4c4f37e2c28f3c8e3763259b4b9d9ce1 329 PANTHER PTHR21708 1 304 8.3E-45 T 22-04-2016 RM25_RS00680 4c4f37e2c28f3c8e3763259b4b9d9ce1 329 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 183 309 2.6E-27 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RM25_RS04265 22875a8474d74a7550f4fcd921933ab9 264 PANTHER PTHR10434:SF21 29 245 1.8E-41 T 22-04-2016 RM25_RS04265 22875a8474d74a7550f4fcd921933ab9 264 SMART SM00563 59 177 2.1E-25 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RM25_RS04265 22875a8474d74a7550f4fcd921933ab9 264 Gene3D G3DSA:3.40.1130.10 36 241 2.4E-19 T 22-04-2016 RM25_RS04265 22875a8474d74a7550f4fcd921933ab9 264 Pfam PF01553 Acyltransferase 45 173 2.0E-24 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RM25_RS04265 22875a8474d74a7550f4fcd921933ab9 264 PANTHER PTHR10434 29 245 1.8E-41 T 22-04-2016 RM25_RS04265 22875a8474d74a7550f4fcd921933ab9 264 SUPERFAMILY SSF69593 27 236 1.44E-32 T 22-04-2016 RM25_RS05040 11b67ceaabebc7758de3b3d22cc3359c 572 Gene3D G3DSA:1.20.1640.10 313 507 3.8E-22 T 22-04-2016 RM25_RS05040 11b67ceaabebc7758de3b3d22cc3359c 572 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 4 515 38.438 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RM25_RS05040 11b67ceaabebc7758de3b3d22cc3359c 572 Pfam PF02355 Protein export membrane protein 328 504 5.1E-13 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RM25_RS05040 11b67ceaabebc7758de3b3d22cc3359c 572 SUPERFAMILY SSF82866 305 507 1.24E-29 T 22-04-2016 RM25_RS05040 11b67ceaabebc7758de3b3d22cc3359c 572 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 254 491 8.6E-57 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RM25_RS05040 11b67ceaabebc7758de3b3d22cc3359c 572 PANTHER PTHR30081:SF4 11 122 9.9E-153 T 22-04-2016 RM25_RS05040 11b67ceaabebc7758de3b3d22cc3359c 572 PANTHER PTHR30081:SF4 220 534 9.9E-153 T 22-04-2016 RM25_RS05040 11b67ceaabebc7758de3b3d22cc3359c 572 PANTHER PTHR30081 11 122 9.9E-153 T 22-04-2016 RM25_RS05040 11b67ceaabebc7758de3b3d22cc3359c 572 PANTHER PTHR30081 220 534 9.9E-153 T 22-04-2016 RM25_RS05040 11b67ceaabebc7758de3b3d22cc3359c 572 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 40 500 1.6E-103 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 Gene3D G3DSA:3.40.50.40 203 329 1.6E-36 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 SUPERFAMILY SSF53774 2 329 4.58E-86 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 SMART SM00870 2 317 9.3E-91 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 PANTHER PTHR11707 2 332 5.4E-83 T 22-04-2016 RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 Pfam PF00710 Asparaginase, N-terminal 2 183 8.6E-53 T 22-04-2016 IPR027474 L-asparaginase, N-terminal RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 Gene3D G3DSA:3.40.50.1170 2 184 3.0E-57 T 22-04-2016 IPR027474 L-asparaginase, N-terminal RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 PIRSF PIRSF001220 1 328 6.5E-65 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 PANTHER PTHR11707:SF28 2 332 5.4E-83 T 22-04-2016 RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 79 89 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 PIRSF PIRSF500176 1 326 1.4E-92 T 22-04-2016 RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 PRINTS PR00139 Asparaginase/glutaminase family signature 3 14 1.3E-10 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 PRINTS PR00139 Asparaginase/glutaminase family signature 254 272 1.3E-10 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RM25_RS08775 952ffd2764aa203cf9a1bfeb888f0f73 333 PRINTS PR00139 Asparaginase/glutaminase family signature 78 96 1.3E-10 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RM25_RS05020 a2243eccfb2eb394d3bda04d21fc4aaf 206 Gene3D G3DSA:3.30.420.10 1 157 1.9E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS05020 a2243eccfb2eb394d3bda04d21fc4aaf 206 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 152 2.9E-46 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RM25_RS05020 a2243eccfb2eb394d3bda04d21fc4aaf 206 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 1.1E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RM25_RS05020 a2243eccfb2eb394d3bda04d21fc4aaf 206 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 1.1E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RM25_RS05020 a2243eccfb2eb394d3bda04d21fc4aaf 206 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.1E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RM25_RS05020 a2243eccfb2eb394d3bda04d21fc4aaf 206 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 1.1E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RM25_RS05020 a2243eccfb2eb394d3bda04d21fc4aaf 206 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 1.1E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RM25_RS05020 a2243eccfb2eb394d3bda04d21fc4aaf 206 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 2.6E-31 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RM25_RS05020 a2243eccfb2eb394d3bda04d21fc4aaf 206 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 149 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 RM25_RS05020 a2243eccfb2eb394d3bda04d21fc4aaf 206 PANTHER PTHR30194 1 171 2.3E-54 T 22-04-2016 RM25_RS05020 a2243eccfb2eb394d3bda04d21fc4aaf 206 SUPERFAMILY SSF53098 2 156 7.59E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS05020 a2243eccfb2eb394d3bda04d21fc4aaf 206 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 155 42.54 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RM25_RS05945 99a01a526902d8b683a39c6426a89893 198 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 100 8.0E-14 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RM25_RS05945 99a01a526902d8b683a39c6426a89893 198 PANTHER PTHR33231 1 196 3.9E-39 T 22-04-2016 RM25_RS05945 99a01a526902d8b683a39c6426a89893 198 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 139 192 1.0E-21 T 22-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal RM25_RS05945 99a01a526902d8b683a39c6426a89893 198 SUPERFAMILY SSF69754 3 108 1.57E-18 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RM25_RS05945 99a01a526902d8b683a39c6426a89893 198 PANTHER PTHR33231:SF1 1 196 3.9E-39 T 22-04-2016 RM25_RS05945 99a01a526902d8b683a39c6426a89893 198 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 105 5.6E-16 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RM25_RS05945 99a01a526902d8b683a39c6426a89893 198 Gene3D G3DSA:3.30.160.100 1 101 6.5E-18 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RM25_RS11600 b2041ba933d79592af5d34b17a55608f 194 PANTHER PTHR31760:SF0 1 171 1.6E-50 T 22-04-2016 RM25_RS11600 b2041ba933d79592af5d34b17a55608f 194 PANTHER PTHR31760 1 171 1.6E-50 T 22-04-2016 RM25_RS11600 b2041ba933d79592af5d34b17a55608f 194 Pfam PF02527 rRNA small subunit methyltransferase G 6 173 2.1E-45 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RM25_RS11600 b2041ba933d79592af5d34b17a55608f 194 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 1 191 23.705 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RM25_RS11600 b2041ba933d79592af5d34b17a55608f 194 SUPERFAMILY SSF53335 5 165 1.26E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS11600 b2041ba933d79592af5d34b17a55608f 194 PIRSF PIRSF003078 1 192 6.8E-45 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RM25_RS11600 b2041ba933d79592af5d34b17a55608f 194 Gene3D G3DSA:3.40.50.150 5 191 9.0E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS11600 b2041ba933d79592af5d34b17a55608f 194 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 11 171 5.2E-37 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RM25_RS09610 e60b3992aef8634fcf8ddb1ee837c907 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RM25_RS09610 e60b3992aef8634fcf8ddb1ee837c907 112 Gene3D G3DSA:3.30.70.120 1 112 8.9E-43 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RM25_RS09610 e60b3992aef8634fcf8ddb1ee837c907 112 PANTHER PTHR30115 1 112 2.6E-52 T 22-04-2016 RM25_RS09610 e60b3992aef8634fcf8ddb1ee837c907 112 SUPERFAMILY SSF54913 1 112 1.11E-39 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RM25_RS09610 e60b3992aef8634fcf8ddb1ee837c907 112 SMART SM00938 4 105 1.6E-52 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RM25_RS09610 e60b3992aef8634fcf8ddb1ee837c907 112 PRINTS PR00340 P-II protein signature 2 17 3.1E-31 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RM25_RS09610 e60b3992aef8634fcf8ddb1ee837c907 112 PRINTS PR00340 P-II protein signature 83 103 3.1E-31 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RM25_RS09610 e60b3992aef8634fcf8ddb1ee837c907 112 PRINTS PR00340 P-II protein signature 23 41 3.1E-31 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RM25_RS09610 e60b3992aef8634fcf8ddb1ee837c907 112 PRINTS PR00340 P-II protein signature 52 75 3.1E-31 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RM25_RS09610 e60b3992aef8634fcf8ddb1ee837c907 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 7.9E-36 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RM25_RS07660 4c1aa05dcc064083c552c1e7d1cabd9e 445 Gene3D G3DSA:1.20.1250.20 233 408 1.9E-16 T 22-04-2016 RM25_RS07660 4c1aa05dcc064083c552c1e7d1cabd9e 445 Gene3D G3DSA:1.20.1250.20 28 216 2.5E-18 T 22-04-2016 RM25_RS07660 4c1aa05dcc064083c552c1e7d1cabd9e 445 SUPERFAMILY SSF103473 25 414 1.96E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS07660 4c1aa05dcc064083c552c1e7d1cabd9e 445 PANTHER PTHR23513 4 434 1.5E-92 T 22-04-2016 RM25_RS07660 4c1aa05dcc064083c552c1e7d1cabd9e 445 PANTHER PTHR23513:SF6 4 434 1.5E-92 T 22-04-2016 RM25_RS07660 4c1aa05dcc064083c552c1e7d1cabd9e 445 Pfam PF05977 Transmembrane secretion effector 18 403 2.3E-53 T 22-04-2016 IPR010290 Transmembrane secretion effector RM25_RS00100 ef8bfadc42451dd3987b80af7cd66171 362 PANTHER PTHR30352 26 362 2.0E-140 T 22-04-2016 RM25_RS00100 ef8bfadc42451dd3987b80af7cd66171 362 PIRSF PIRSF004869 19 336 1.2E-88 T 22-04-2016 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted RM25_RS00100 ef8bfadc42451dd3987b80af7cd66171 362 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 28 361 1.4E-159 T 22-04-2016 IPR027596 AmmeMemoRadiSam system radical SAM enzyme RM25_RS00100 ef8bfadc42451dd3987b80af7cd66171 362 PANTHER PTHR30352:SF5 26 362 2.0E-140 T 22-04-2016 RM25_RS00100 ef8bfadc42451dd3987b80af7cd66171 362 Pfam PF04055 Radical SAM superfamily 103 255 2.8E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RM25_RS00100 ef8bfadc42451dd3987b80af7cd66171 362 Gene3D G3DSA:3.80.30.10 145 309 1.3E-29 T 22-04-2016 RM25_RS00100 ef8bfadc42451dd3987b80af7cd66171 362 SMART SM00729 96 301 0.0067 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RM25_RS00100 ef8bfadc42451dd3987b80af7cd66171 362 SUPERFAMILY SSF102114 74 338 1.96E-37 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PANTHER PTHR24093 222 880 1.2E-220 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 296 876 5.4E-189 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 SUPERFAMILY SSF56784 570 590 3.35E-57 T 22-04-2016 IPR023214 HAD-like domain RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 SUPERFAMILY SSF56784 660 874 3.35E-57 T 22-04-2016 IPR023214 HAD-like domain RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PANTHER PTHR24093:SF50 222 880 1.2E-220 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 341 845 7.5E-86 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00943 Copper-transporting ATPase signature 555 570 7.0E-13 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00943 Copper-transporting ATPase signature 339 358 7.0E-13 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00943 Copper-transporting ATPase signature 744 761 7.0E-13 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00943 Copper-transporting ATPase signature 493 507 7.0E-13 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00943 Copper-transporting ATPase signature 281 300 7.0E-13 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00943 Copper-transporting ATPase signature 840 854 7.0E-13 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00943 Copper-transporting ATPase signature 359 377 7.0E-13 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 692 703 1.4E-26 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 790 802 1.4E-26 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 572 586 1.4E-26 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 420 434 1.4E-26 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 714 724 1.4E-26 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 767 786 1.4E-26 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 Pfam PF00122 E1-E2 ATPase 340 563 1.7E-64 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 277 877 1.2E-175 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 Gene3D G3DSA:3.40.50.1000 543 586 4.1E-53 T 22-04-2016 IPR023214 HAD-like domain RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 Gene3D G3DSA:3.40.50.1000 695 835 4.1E-53 T 22-04-2016 IPR023214 HAD-like domain RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 SUPERFAMILY SSF81665 471 566 9.42E-16 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 SUPERFAMILY SSF81665 816 839 9.42E-16 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 SUPERFAMILY SSF81665 323 373 9.42E-16 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 Gene3D G3DSA:3.40.1110.10 587 694 8.4E-20 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 SUPERFAMILY SSF81653 377 470 1.7E-25 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 337 876 5.4E-121 T 22-04-2016 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 574 580 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 Gene3D G3DSA:2.70.150.10 309 471 1.4E-25 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RM25_RS09165 058236676f97c5766bbefcf65a02c0b8 881 Pfam PF00702 haloacid dehalogenase-like hydrolase 568 781 1.0E-42 T 22-04-2016 RM25_RS04110 7a7d0eb80f9ac3e4754adceacd43d485 442 Pfam PF00149 Calcineurin-like phosphoesterase 130 342 1.0E-8 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RM25_RS04110 7a7d0eb80f9ac3e4754adceacd43d485 442 SUPERFAMILY SSF49363 23 96 1.7E-5 T 22-04-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 RM25_RS04110 7a7d0eb80f9ac3e4754adceacd43d485 442 Gene3D G3DSA:2.60.40.380 24 96 1.9E-4 T 22-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 RM25_RS04110 7a7d0eb80f9ac3e4754adceacd43d485 442 Gene3D G3DSA:3.60.21.10 130 380 1.6E-17 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS04110 7a7d0eb80f9ac3e4754adceacd43d485 442 SUPERFAMILY SSF56300 130 387 2.81E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS04410 45d03bda434464eceeff877873378887 463 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 108 119 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS04410 45d03bda434464eceeff877873378887 463 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS04410 45d03bda434464eceeff877873378887 463 Gene3D G3DSA:1.10.1060.10 49 137 7.7E-13 T 22-04-2016 RM25_RS04410 45d03bda434464eceeff877873378887 463 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 59 451 2.0E-88 T 22-04-2016 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 UniPathway: UPA00618 RM25_RS04410 45d03bda434464eceeff877873378887 463 PANTHER PTHR32479 52 449 2.2E-100 T 22-04-2016 RM25_RS04410 45d03bda434464eceeff877873378887 463 SUPERFAMILY SSF46548 58 135 1.24E-14 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RM25_RS04410 45d03bda434464eceeff877873378887 463 PANTHER PTHR32479:SF9 52 449 2.2E-100 T 22-04-2016 RM25_RS04410 45d03bda434464eceeff877873378887 463 Pfam PF02754 Cysteine-rich domain 353 435 5.6E-8 T 22-04-2016 IPR004017 Cysteine-rich domain RM25_RS04410 45d03bda434464eceeff877873378887 463 Pfam PF02754 Cysteine-rich domain 220 303 1.3E-9 T 22-04-2016 IPR004017 Cysteine-rich domain RM25_RS04410 45d03bda434464eceeff877873378887 463 Pfam PF13183 4Fe-4S dicluster domain 60 122 7.2E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 SUPERFAMILY SSF57716 12 46 1.85E-11 T 22-04-2016 RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 SMART SM00382 114 333 2.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 Gene3D G3DSA:1.10.8.60 317 413 1.2E-33 T 22-04-2016 RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 SUPERFAMILY SSF52540 60 402 1.9E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 411 1.5E-190 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 SMART SM00994 10 49 1.1E-21 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 311 3.1E-47 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 PANTHER PTHR11262 5 419 5.0E-227 T 22-04-2016 RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 415 51.142 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 SMART SM01086 317 411 3.3E-31 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 Gene3D G3DSA:3.40.50.300 294 311 3.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 Gene3D G3DSA:3.40.50.300 64 256 3.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 393 3.7E-16 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RM25_RS03865 e446f030e99a0bb30a6522b6edd59fea 425 Pfam PF06689 ClpX C4-type zinc finger 12 48 5.2E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RM25_RS07605 740345d8601b3e1e0e76a13364c4db49 312 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 227 259 9.3E-15 T 22-04-2016 IPR001451 Hexapeptide repeat RM25_RS07605 740345d8601b3e1e0e76a13364c4db49 312 Gene3D G3DSA:2.160.10.10 147 295 1.1E-30 T 22-04-2016 RM25_RS07605 740345d8601b3e1e0e76a13364c4db49 312 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 7 310 41.69 T 22-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RM25_RS07605 740345d8601b3e1e0e76a13364c4db49 312 TIGRFAM TIGR03535 DapD_actino: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 8 312 2.0E-145 T 22-04-2016 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RM25_RS07605 740345d8601b3e1e0e76a13364c4db49 312 Gene3D G3DSA:3.30.60.70 105 145 1.7E-6 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RM25_RS07605 740345d8601b3e1e0e76a13364c4db49 312 SUPERFAMILY SSF51161 62 292 7.9E-34 T 22-04-2016 IPR011004 Trimeric LpxA-like RM25_RS07605 740345d8601b3e1e0e76a13364c4db49 312 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 105 145 3.6E-17 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RM25_RS10955 4fdc74a1c466749b9fa3b318c86d5300 381 PANTHER PTHR22604:SF123 1 203 4.2E-63 T 22-04-2016 RM25_RS10955 4fdc74a1c466749b9fa3b318c86d5300 381 PANTHER PTHR22604:SF123 227 381 4.2E-63 T 22-04-2016 RM25_RS10955 4fdc74a1c466749b9fa3b318c86d5300 381 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 3.7E-21 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RM25_RS10955 4fdc74a1c466749b9fa3b318c86d5300 381 SUPERFAMILY SSF51735 6 151 5.66E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10955 4fdc74a1c466749b9fa3b318c86d5300 381 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 254 1.4E-6 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RM25_RS10955 4fdc74a1c466749b9fa3b318c86d5300 381 Gene3D G3DSA:3.30.360.10 328 378 1.8E-35 T 22-04-2016 RM25_RS10955 4fdc74a1c466749b9fa3b318c86d5300 381 Gene3D G3DSA:3.30.360.10 139 278 1.8E-35 T 22-04-2016 RM25_RS10955 4fdc74a1c466749b9fa3b318c86d5300 381 Gene3D G3DSA:3.40.50.720 3 138 1.6E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10955 4fdc74a1c466749b9fa3b318c86d5300 381 SUPERFAMILY SSF55347 125 291 9.97E-28 T 22-04-2016 RM25_RS10955 4fdc74a1c466749b9fa3b318c86d5300 381 PANTHER PTHR22604 1 203 4.2E-63 T 22-04-2016 RM25_RS10955 4fdc74a1c466749b9fa3b318c86d5300 381 PANTHER PTHR22604 227 381 4.2E-63 T 22-04-2016 RM25_RS02330 6168f80d0722f44c52c16705969d2181 425 PANTHER PTHR10617 14 405 5.8E-76 T 22-04-2016 RM25_RS02330 6168f80d0722f44c52c16705969d2181 425 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 14 330 2.5E-73 T 22-04-2016 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 RM25_RS02330 6168f80d0722f44c52c16705969d2181 425 Gene3D G3DSA:3.50.50.60 9 172 1.7E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS02330 6168f80d0722f44c52c16705969d2181 425 SUPERFAMILY SSF51905 282 375 6.67E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS02330 6168f80d0722f44c52c16705969d2181 425 SUPERFAMILY SSF51905 13 179 6.67E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS02330 6168f80d0722f44c52c16705969d2181 425 Gene3D G3DSA:3.30.9.10 173 337 3.5E-48 T 22-04-2016 RM25_RS02330 6168f80d0722f44c52c16705969d2181 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 14 36 4.3E-9 T 22-04-2016 RM25_RS02330 6168f80d0722f44c52c16705969d2181 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 4.3E-9 T 22-04-2016 RM25_RS02330 6168f80d0722f44c52c16705969d2181 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 310 4.3E-9 T 22-04-2016 RM25_RS02330 6168f80d0722f44c52c16705969d2181 425 Pfam PF01494 FAD binding domain 12 320 1.3E-15 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RM25_RS02330 6168f80d0722f44c52c16705969d2181 425 PANTHER PTHR10617:SF101 14 405 5.8E-76 T 22-04-2016 RM25_RS11860 b74212265cf25c8daf274688062dedee 167 Pfam PF02699 Preprotein translocase subunit 7 81 7.4E-25 T 22-04-2016 IPR003849 Preprotein translocase YajC RM25_RS11860 b74212265cf25c8daf274688062dedee 167 PRINTS PR01853 Bacterial YajC preprotein translocase signature 4 24 3.1E-9 T 22-04-2016 IPR003849 Preprotein translocase YajC RM25_RS11860 b74212265cf25c8daf274688062dedee 167 PRINTS PR01853 Bacterial YajC preprotein translocase signature 42 60 3.1E-9 T 22-04-2016 IPR003849 Preprotein translocase YajC RM25_RS11860 b74212265cf25c8daf274688062dedee 167 PANTHER PTHR33909 1 108 1.7E-26 T 22-04-2016 RM25_RS11860 b74212265cf25c8daf274688062dedee 167 PANTHER PTHR33909:SF1 1 108 1.7E-26 T 22-04-2016 RM25_RS11860 b74212265cf25c8daf274688062dedee 167 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 6 84 1.4E-25 T 22-04-2016 IPR003849 Preprotein translocase YajC RM25_RS11860 b74212265cf25c8daf274688062dedee 167 SMART SM01323 2 84 2.6E-34 T 22-04-2016 IPR003849 Preprotein translocase YajC RM25_RS04925 b29f9d40602ceafe5de961df4fa2c099 506 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 170 9.7E-26 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RM25_RS04925 b29f9d40602ceafe5de961df4fa2c099 506 Pfam PF00425 chorismate binding enzyme 229 480 4.5E-92 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RM25_RS04925 b29f9d40602ceafe5de961df4fa2c099 506 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 28 487 5.8E-159 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RM25_RS04925 b29f9d40602ceafe5de961df4fa2c099 506 Gene3D G3DSA:3.60.120.10 19 490 2.7E-158 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RM25_RS04925 b29f9d40602ceafe5de961df4fa2c099 506 PANTHER PTHR11236 1 495 1.4E-208 T 22-04-2016 RM25_RS04925 b29f9d40602ceafe5de961df4fa2c099 506 PRINTS PR00095 Anthranilate synthase component I signature 342 355 7.4E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RM25_RS04925 b29f9d40602ceafe5de961df4fa2c099 506 PRINTS PR00095 Anthranilate synthase component I signature 328 341 7.4E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RM25_RS04925 b29f9d40602ceafe5de961df4fa2c099 506 PRINTS PR00095 Anthranilate synthase component I signature 437 451 7.4E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RM25_RS04925 b29f9d40602ceafe5de961df4fa2c099 506 PRINTS PR00095 Anthranilate synthase component I signature 422 436 7.4E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RM25_RS04925 b29f9d40602ceafe5de961df4fa2c099 506 SUPERFAMILY SSF56322 20 488 1.7E-142 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RM25_RS04925 b29f9d40602ceafe5de961df4fa2c099 506 PANTHER PTHR11236:SF9 1 495 1.4E-208 T 22-04-2016 RM25_RS08920 d43b6b2a9839a93e94fcf5b4c27b88f4 307 SUPERFAMILY SSF51658 17 302 1.29E-49 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS08920 d43b6b2a9839a93e94fcf5b4c27b88f4 307 PANTHER PTHR12110 20 305 3.3E-104 T 22-04-2016 RM25_RS08920 d43b6b2a9839a93e94fcf5b4c27b88f4 307 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 18 303 6.1E-102 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 RM25_RS08920 d43b6b2a9839a93e94fcf5b4c27b88f4 307 Gene3D G3DSA:3.20.20.150 15 303 1.2E-68 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS08920 d43b6b2a9839a93e94fcf5b4c27b88f4 307 PANTHER PTHR12110:SF4 20 305 3.3E-104 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 RM25_RS08920 d43b6b2a9839a93e94fcf5b4c27b88f4 307 Pfam PF01261 Xylose isomerase-like TIM barrel 51 229 1.9E-20 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 Gene3D G3DSA:1.10.10.160 155 229 6.7E-26 T 22-04-2016 IPR013986 DExx box DNA helicase domain RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 Gene3D G3DSA:3.40.50.300 42 148 5.7E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 Gene3D G3DSA:3.40.50.300 230 338 5.7E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 Gene3D G3DSA:1.10.486.10 442 574 3.3E-43 T 22-04-2016 RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 Gene3D G3DSA:1.10.486.10 607 625 3.3E-43 T 22-04-2016 RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 Pfam PF13361 UvrD-like helicase C-terminal domain 330 702 6.2E-65 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 PANTHER PTHR11070 41 570 3.3E-220 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 PANTHER PTHR11070 613 829 3.3E-220 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 Pfam PF00580 UvrD/REP helicase N-terminal domain 48 325 6.4E-78 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 SUPERFAMILY SSF52540 641 730 1.17E-170 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 SUPERFAMILY SSF52540 42 588 1.17E-170 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 PANTHER PTHR11070:SF7 41 570 3.3E-220 T 22-04-2016 RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 PANTHER PTHR11070:SF7 613 829 3.3E-220 T 22-04-2016 RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 Gene3D G3DSA:3.40.50.300 339 441 1.6E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03145 7825cfbd96b2987056210d0802a502db 829 Gene3D G3DSA:3.40.50.300 640 731 1.6E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00765 cccf47747aad83882eb5c79926ec4299 323 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 139 160 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RM25_RS00765 cccf47747aad83882eb5c79926ec4299 323 Pfam PF00107 Zinc-binding dehydrogenase 150 263 8.6E-31 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RM25_RS00765 cccf47747aad83882eb5c79926ec4299 323 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 87 1.9E-9 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RM25_RS00765 cccf47747aad83882eb5c79926ec4299 323 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 322 2.6E-117 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- RM25_RS00765 cccf47747aad83882eb5c79926ec4299 323 Gene3D G3DSA:3.90.180.10 1 144 4.3E-44 T 22-04-2016 IPR011032 GroES-like RM25_RS00765 cccf47747aad83882eb5c79926ec4299 323 SUPERFAMILY SSF50129 1 148 3.5E-35 T 22-04-2016 IPR011032 GroES-like RM25_RS00765 cccf47747aad83882eb5c79926ec4299 323 Gene3D G3DSA:3.40.50.720 145 288 1.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00765 cccf47747aad83882eb5c79926ec4299 323 SMART SM00829 10 321 4.4E-46 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RM25_RS00765 cccf47747aad83882eb5c79926ec4299 323 PANTHER PTHR11695:SF610 15 323 4.3E-121 T 22-04-2016 RM25_RS00765 cccf47747aad83882eb5c79926ec4299 323 PANTHER PTHR11695 15 323 4.3E-121 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RM25_RS00765 cccf47747aad83882eb5c79926ec4299 323 SUPERFAMILY SSF51735 111 285 1.2E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01295 d2734911214a23623bf84335175864f3 280 PANTHER PTHR35797:SF1 7 267 1.1E-21 T 22-04-2016 RM25_RS01295 d2734911214a23623bf84335175864f3 280 PANTHER PTHR35797 7 267 1.1E-21 T 22-04-2016 RM25_RS01295 d2734911214a23623bf84335175864f3 280 Pfam PF02517 CAAX protease self-immunity 120 213 1.1E-17 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 ProSitePatterns PS00447 DNA polymerase family A signature. 717 736 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 175 269 1.5E-24 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 SMART SM00474 307 481 6.7E-8 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 Gene3D G3DSA:1.10.150.20 191 247 8.5E-24 T 22-04-2016 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 Gene3D G3DSA:1.10.150.20 675 781 1.6E-28 T 22-04-2016 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 SUPERFAMILY SSF47807 175 288 8.07E-28 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 Gene3D G3DSA:3.30.70.370 782 890 5.3E-64 T 22-04-2016 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 Gene3D G3DSA:3.30.70.370 626 674 5.3E-64 T 22-04-2016 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 SMART SM00475 5 265 9.1E-122 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 663 686 2.1E-69 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 808 824 2.1E-69 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 765 2.1E-69 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 851 2.1E-69 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 617 639 2.1E-69 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 640 655 2.1E-69 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 717 742 2.1E-69 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 706 2.1E-69 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 776 787 2.1E-69 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 174 3.5E-51 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 SUPERFAMILY SSF88723 6 174 1.82E-49 T 22-04-2016 IPR029060 PIN domain-like RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 SUPERFAMILY SSF56672 486 889 5.45E-137 T 22-04-2016 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 SMART SM00279 177 212 1.1E-12 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 PANTHER PTHR10133 6 890 0.0 T 22-04-2016 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 Gene3D G3DSA:3.40.50.1010 6 190 1.5E-62 T 22-04-2016 IPR029060 PIN domain-like RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 Gene3D G3DSA:3.30.420.10 313 505 1.8E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 Gene3D G3DSA:1.20.1060.10 506 625 3.1E-30 T 22-04-2016 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 PANTHER PTHR10133:SF27 6 890 0.0 T 22-04-2016 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 SUPERFAMILY SSF53098 313 482 3.49E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 TIGRFAM TIGR00593 pola: DNA polymerase I 7 890 2.7E-284 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 SMART SM00482 648 855 5.7E-110 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07180 13769dd8f8c0f2c78c31e77a40b123fe 892 Pfam PF00476 DNA polymerase family A 514 888 3.1E-140 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS08680 bba15d839b2d95a81a59c865cf156008 713 PANTHER PTHR16254:SF21 22 300 3.1E-28 T 22-04-2016 RM25_RS08680 bba15d839b2d95a81a59c865cf156008 713 SUPERFAMILY SSF81324 20 129 3.27E-9 T 22-04-2016 RM25_RS08680 bba15d839b2d95a81a59c865cf156008 713 SUPERFAMILY SSF81324 302 321 3.27E-9 T 22-04-2016 RM25_RS08680 bba15d839b2d95a81a59c865cf156008 713 Gene3D G3DSA:3.40.50.720 140 277 1.1E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08680 bba15d839b2d95a81a59c865cf156008 713 Gene3D G3DSA:3.40.50.720 301 434 1.5E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08680 bba15d839b2d95a81a59c865cf156008 713 SUPERFAMILY SSF51735 300 435 1.57E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08680 bba15d839b2d95a81a59c865cf156008 713 PANTHER PTHR16254 22 300 3.1E-28 T 22-04-2016 RM25_RS08680 bba15d839b2d95a81a59c865cf156008 713 SUPERFAMILY SSF51735 139 287 3.15E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08680 bba15d839b2d95a81a59c865cf156008 713 Pfam PF02254 TrkA-N domain 140 261 5.0E-17 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RM25_RS08680 bba15d839b2d95a81a59c865cf156008 713 Pfam PF02254 TrkA-N domain 305 402 7.4E-15 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RM25_RS08680 bba15d839b2d95a81a59c865cf156008 713 Gene3D G3DSA:1.10.287.70 10 117 4.7E-6 T 22-04-2016 RM25_RS01375 172555eb506b4c4e8a729a45a1992f7c 507 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 11 501 5.7E-238 T 22-04-2016 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 RM25_RS01375 172555eb506b4c4e8a729a45a1992f7c 507 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 10 221 2.7E-27 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 RM25_RS01375 172555eb506b4c4e8a729a45a1992f7c 507 Gene3D G3DSA:3.40.1080.10 10 225 2.3E-44 T 22-04-2016 RM25_RS01375 172555eb506b4c4e8a729a45a1992f7c 507 SUPERFAMILY SSF100950 3 227 2.85E-67 T 22-04-2016 RM25_RS01375 172555eb506b4c4e8a729a45a1992f7c 507 PANTHER PTHR21432:SF10 1 505 3.4E-248 T 22-04-2016 RM25_RS01375 172555eb506b4c4e8a729a45a1992f7c 507 Gene3D G3DSA:3.40.810.20 230 495 5.2E-74 T 22-04-2016 RM25_RS01375 172555eb506b4c4e8a729a45a1992f7c 507 SUPERFAMILY SSF100950 230 502 3.07E-82 T 22-04-2016 RM25_RS01375 172555eb506b4c4e8a729a45a1992f7c 507 PANTHER PTHR21432 1 505 3.4E-248 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 RM25_RS01375 172555eb506b4c4e8a729a45a1992f7c 507 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 328 468 1.1E-40 T 22-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain RM25_RS02750 17bd5d09ba129f6a93ba50a9875cf2e7 191 Pfam PF00406 Adenylate kinase 5 163 3.4E-53 T 22-04-2016 RM25_RS02750 17bd5d09ba129f6a93ba50a9875cf2e7 191 PANTHER PTHR23359 1 189 4.9E-75 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RM25_RS02750 17bd5d09ba129f6a93ba50a9875cf2e7 191 SUPERFAMILY SSF52540 2 186 2.05E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02750 17bd5d09ba129f6a93ba50a9875cf2e7 191 Hamap MF_00235 Adenylate kinase [adk]. 1 186 43.758 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RM25_RS02750 17bd5d09ba129f6a93ba50a9875cf2e7 191 Gene3D G3DSA:3.40.50.300 2 184 4.1E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02750 17bd5d09ba129f6a93ba50a9875cf2e7 191 PRINTS PR00094 Adenylate kinase signature 150 164 9.2E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RM25_RS02750 17bd5d09ba129f6a93ba50a9875cf2e7 191 PRINTS PR00094 Adenylate kinase signature 133 148 9.2E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RM25_RS02750 17bd5d09ba129f6a93ba50a9875cf2e7 191 PRINTS PR00094 Adenylate kinase signature 81 97 9.2E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RM25_RS02750 17bd5d09ba129f6a93ba50a9875cf2e7 191 PRINTS PR00094 Adenylate kinase signature 32 46 9.2E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RM25_RS02750 17bd5d09ba129f6a93ba50a9875cf2e7 191 PRINTS PR00094 Adenylate kinase signature 4 17 9.2E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RM25_RS02750 17bd5d09ba129f6a93ba50a9875cf2e7 191 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RM25_RS10475 2f02639848f3a14fa0422b23726229cc 524 SUPERFAMILY SSF53067 11 262 7.51E-63 T 22-04-2016 RM25_RS10475 2f02639848f3a14fa0422b23726229cc 524 PIRSF PIRSF000538 9 517 2.3E-112 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RM25_RS10475 2f02639848f3a14fa0422b23726229cc 524 Gene3D G3DSA:3.30.420.40 261 512 1.3E-63 T 22-04-2016 RM25_RS10475 2f02639848f3a14fa0422b23726229cc 524 PANTHER PTHR10196 10 521 5.6E-142 T 22-04-2016 RM25_RS10475 2f02639848f3a14fa0422b23726229cc 524 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 259 4.7E-43 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RM25_RS10475 2f02639848f3a14fa0422b23726229cc 524 SUPERFAMILY SSF53067 261 512 1.13E-62 T 22-04-2016 RM25_RS10475 2f02639848f3a14fa0422b23726229cc 524 Gene3D G3DSA:3.30.420.40 9 259 1.2E-61 T 22-04-2016 RM25_RS10475 2f02639848f3a14fa0422b23726229cc 524 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 272 464 8.0E-40 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RM25_RS10475 2f02639848f3a14fa0422b23726229cc 524 PANTHER PTHR10196:SF59 10 521 5.6E-142 T 22-04-2016 RM25_RS10845 d3f9a117d19f33e2aa9e97cff281cd50 518 SUPERFAMILY SSF53067 12 255 4.19E-58 T 22-04-2016 RM25_RS10845 d3f9a117d19f33e2aa9e97cff281cd50 518 PANTHER PTHR10196 9 517 5.4E-115 T 22-04-2016 RM25_RS10845 d3f9a117d19f33e2aa9e97cff281cd50 518 SUPERFAMILY SSF53067 256 508 7.77E-55 T 22-04-2016 RM25_RS10845 d3f9a117d19f33e2aa9e97cff281cd50 518 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 265 452 4.7E-36 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RM25_RS10845 d3f9a117d19f33e2aa9e97cff281cd50 518 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 12 253 2.1E-51 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RM25_RS10845 d3f9a117d19f33e2aa9e97cff281cd50 518 PIRSF PIRSF000538 10 514 2.4E-116 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RM25_RS10845 d3f9a117d19f33e2aa9e97cff281cd50 518 Gene3D G3DSA:3.30.420.40 256 509 3.7E-50 T 22-04-2016 RM25_RS10845 d3f9a117d19f33e2aa9e97cff281cd50 518 Gene3D G3DSA:3.30.420.40 9 254 6.8E-61 T 22-04-2016 RM25_RS02630 5ccf2a0845eab5b97d62875169256608 93 Pfam PF00203 Ribosomal protein S19 3 83 2.9E-34 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RM25_RS02630 5ccf2a0845eab5b97d62875169256608 93 Gene3D G3DSA:3.30.860.10 1 92 3.5E-40 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RM25_RS02630 5ccf2a0845eab5b97d62875169256608 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.345 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RM25_RS02630 5ccf2a0845eab5b97d62875169256608 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.9E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RM25_RS02630 5ccf2a0845eab5b97d62875169256608 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.9E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RM25_RS02630 5ccf2a0845eab5b97d62875169256608 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.9E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RM25_RS02630 5ccf2a0845eab5b97d62875169256608 93 PIRSF PIRSF002144 1 93 1.9E-30 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RM25_RS02630 5ccf2a0845eab5b97d62875169256608 93 PANTHER PTHR11880 1 92 5.0E-51 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RM25_RS02630 5ccf2a0845eab5b97d62875169256608 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 3.0E-45 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 RM25_RS02630 5ccf2a0845eab5b97d62875169256608 93 SUPERFAMILY SSF54570 3 84 3.27E-34 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RM25_RS02630 5ccf2a0845eab5b97d62875169256608 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 RM25_RS04045 1d60029ebccd7aa00b2281e97e4f34bc 773 Pfam PF00753 Metallo-beta-lactamase superfamily 519 706 5.0E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS04045 1d60029ebccd7aa00b2281e97e4f34bc 773 Pfam PF13567 Domain of unknown function (DUF4131) 27 163 2.3E-8 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 RM25_RS04045 1d60029ebccd7aa00b2281e97e4f34bc 773 Gene3D G3DSA:3.60.15.10 509 746 7.2E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS04045 1d60029ebccd7aa00b2281e97e4f34bc 773 PANTHER PTHR30619:SF2 185 773 2.3E-108 T 22-04-2016 RM25_RS04045 1d60029ebccd7aa00b2281e97e4f34bc 773 SUPERFAMILY SSF56281 510 761 7.84E-35 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS04045 1d60029ebccd7aa00b2281e97e4f34bc 773 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 237 406 3.8E-14 T 22-04-2016 IPR004477 ComEC/Rec2-related protein RM25_RS04045 1d60029ebccd7aa00b2281e97e4f34bc 773 Pfam PF03772 Competence protein 215 478 5.7E-43 T 22-04-2016 IPR004477 ComEC/Rec2-related protein RM25_RS04045 1d60029ebccd7aa00b2281e97e4f34bc 773 PANTHER PTHR30619 185 773 2.3E-108 T 22-04-2016 RM25_RS04045 1d60029ebccd7aa00b2281e97e4f34bc 773 SMART SM00849 521 726 2.3E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS02980 1a18c5498203d27e66110e5ec6ffb08d 318 PANTHER PTHR30177:SF9 37 313 2.5E-75 T 22-04-2016 RM25_RS02980 1a18c5498203d27e66110e5ec6ffb08d 318 Gene3D G3DSA:3.40.190.120 149 250 5.4E-30 T 22-04-2016 RM25_RS02980 1a18c5498203d27e66110e5ec6ffb08d 318 PANTHER PTHR30177 37 313 2.5E-75 T 22-04-2016 RM25_RS02980 1a18c5498203d27e66110e5ec6ffb08d 318 Gene3D G3DSA:3.40.190.10 40 148 4.2E-51 T 22-04-2016 RM25_RS02980 1a18c5498203d27e66110e5ec6ffb08d 318 Gene3D G3DSA:3.40.190.10 263 313 4.2E-51 T 22-04-2016 RM25_RS02980 1a18c5498203d27e66110e5ec6ffb08d 318 SUPERFAMILY SSF53850 42 312 1.93E-59 T 22-04-2016 RM25_RS02980 1a18c5498203d27e66110e5ec6ffb08d 318 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 42 307 4.4E-59 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RM25_RS02540 338472b3522f9f7bc00835f48c504273 215 Pfam PF00466 Ribosomal protein L10 1 98 6.7E-26 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 RM25_RS02540 338472b3522f9f7bc00835f48c504273 215 SUPERFAMILY SSF160369 1 167 1.12E-49 T 22-04-2016 RM25_RS02540 338472b3522f9f7bc00835f48c504273 215 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 24.134 T 22-04-2016 IPR022973 Ribosomal protein L10 RM25_RS02540 338472b3522f9f7bc00835f48c504273 215 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02540 338472b3522f9f7bc00835f48c504273 215 PANTHER PTHR11560 1 181 2.9E-47 T 22-04-2016 RM25_RS10495 8d715e9d8e829705b8b14a98e22ebc86 227 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RM25_RS10495 8d715e9d8e829705b8b14a98e22ebc86 227 Pfam PF00106 short chain dehydrogenase 6 183 3.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS10495 8d715e9d8e829705b8b14a98e22ebc86 227 SUPERFAMILY SSF51735 4 213 1.8E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10495 8d715e9d8e829705b8b14a98e22ebc86 227 PANTHER PTHR24322 9 174 1.2E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS10495 8d715e9d8e829705b8b14a98e22ebc86 227 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 178 3.5E-4 T 22-04-2016 RM25_RS10495 8d715e9d8e829705b8b14a98e22ebc86 227 Gene3D G3DSA:3.40.50.720 5 211 9.2E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10495 8d715e9d8e829705b8b14a98e22ebc86 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS10495 8d715e9d8e829705b8b14a98e22ebc86 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 2.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS10495 8d715e9d8e829705b8b14a98e22ebc86 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 2.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS10495 8d715e9d8e829705b8b14a98e22ebc86 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 2.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS10495 8d715e9d8e829705b8b14a98e22ebc86 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 SUPERFAMILY SSF56784 306 326 2.47E-49 T 22-04-2016 IPR023214 HAD-like domain RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 SUPERFAMILY SSF56784 366 391 2.47E-49 T 22-04-2016 IPR023214 HAD-like domain RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 SUPERFAMILY SSF56784 436 622 2.47E-49 T 22-04-2016 IPR023214 HAD-like domain RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 310 316 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 7.4E-24 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 521 540 7.4E-24 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 308 322 7.4E-24 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 166 180 7.4E-24 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 468 478 7.4E-24 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 445 456 7.4E-24 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 SUPERFAMILY SSF81665 217 302 1.96E-15 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 SUPERFAMILY SSF81665 571 600 1.96E-15 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 SUPERFAMILY SSF81665 69 120 1.96E-15 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 Gene3D G3DSA:3.40.1110.10 323 447 3.3E-15 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 Pfam PF00122 E1-E2 ATPase 88 299 1.4E-57 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 90 335 5.7E-33 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 427 601 8.1E-36 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 PANTHER PTHR24093 33 598 5.2E-160 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 Pfam PF00702 haloacid dehalogenase-like hydrolase 304 535 2.3E-39 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 PANTHER PTHR24093:SF317 33 598 5.2E-160 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 SUPERFAMILY SSF81653 119 215 2.48E-23 T 22-04-2016 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 Gene3D G3DSA:3.40.50.1000 281 322 2.7E-48 T 22-04-2016 IPR023214 HAD-like domain RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 Gene3D G3DSA:3.40.50.1000 448 587 2.7E-48 T 22-04-2016 IPR023214 HAD-like domain RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 Gene3D G3DSA:2.70.150.10 82 216 5.3E-24 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 66 624 1.2E-162 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 SUPERFAMILY SSF81660 310 450 2.55E-16 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 493 509 6.7E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RM25_RS11200 0e9b7787fcddeca789ce746d5862bdd3 669 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 521 537 6.7E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 PANTHER PTHR30511 1 382 1.5E-126 T 22-04-2016 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 SUPERFAMILY SSF50621 242 378 3.84E-47 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 Gene3D G3DSA:3.20.20.10 11 228 2.9E-64 T 22-04-2016 IPR029066 PLP-binding barrel RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 Pfam PF00842 Alanine racemase, C-terminal domain 247 376 2.6E-39 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 TIGRFAM TIGR00492 alr: alanine racemase 6 377 3.6E-98 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 SUPERFAMILY SSF51419 9 247 3.66E-58 T 22-04-2016 IPR029066 PLP-binding barrel RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 PANTHER PTHR30511:SF0 1 382 1.5E-126 T 22-04-2016 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 Gene3D G3DSA:2.40.37.10 229 379 3.3E-55 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 Hamap MF_01201 Alanine racemase. 2 377 31.924 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 PRINTS PR00992 Alanine racemase signature 125 137 8.8E-55 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 PRINTS PR00992 Alanine racemase signature 280 295 8.8E-55 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 PRINTS PR00992 Alanine racemase signature 207 234 8.8E-55 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 PRINTS PR00992 Alanine racemase signature 301 318 8.8E-55 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 PRINTS PR00992 Alanine racemase signature 27 43 8.8E-55 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 PRINTS PR00992 Alanine racemase signature 263 278 8.8E-55 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 PRINTS PR00992 Alanine racemase signature 158 169 8.8E-55 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 PRINTS PR00992 Alanine racemase signature 64 82 8.8E-55 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 PRINTS PR00992 Alanine racemase signature 359 372 8.8E-55 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 SMART SM01005 247 377 1.6E-60 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00605 2fa20e8a0f2b9abc6d66dae68190522a 382 Pfam PF01168 Alanine racemase, N-terminal domain 9 234 2.0E-61 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RM25_RS00860 7d5ac9bafec33dbc23feb8c6497c36c8 77 Pfam PF06902 Divergent 4Fe-4S mono-cluster 6 73 1.4E-23 T 22-04-2016 IPR010693 Divergent 4Fe-4S mono-cluster RM25_RS00860 7d5ac9bafec33dbc23feb8c6497c36c8 77 SUPERFAMILY SSF54862 13 72 3.87E-6 T 22-04-2016 RM25_RS00860 7d5ac9bafec33dbc23feb8c6497c36c8 77 Gene3D G3DSA:3.30.70.20 12 74 4.8E-7 T 22-04-2016 RM25_RS02970 565e7e8474cfe20c968ca56defca91f3 444 SUPERFAMILY SSF52540 38 278 4.07E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02970 565e7e8474cfe20c968ca56defca91f3 444 PANTHER PTHR24220 39 325 1.9E-139 T 22-04-2016 RM25_RS02970 565e7e8474cfe20c968ca56defca91f3 444 PANTHER PTHR24220:SF350 39 325 1.9E-139 T 22-04-2016 RM25_RS02970 565e7e8474cfe20c968ca56defca91f3 444 Gene3D G3DSA:3.20.20.70 288 432 2.0E-8 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS02970 565e7e8474cfe20c968ca56defca91f3 444 SUPERFAMILY SSF54631 284 397 3.21E-12 T 22-04-2016 RM25_RS02970 565e7e8474cfe20c968ca56defca91f3 444 Pfam PF00005 ABC transporter 56 201 3.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS02970 565e7e8474cfe20c968ca56defca91f3 444 Gene3D G3DSA:3.40.50.300 32 276 7.8E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02970 565e7e8474cfe20c968ca56defca91f3 444 SMART SM00382 64 251 9.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS02970 565e7e8474cfe20c968ca56defca91f3 444 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS10800 2cecf464894367dbe31906157a7ddb33 126 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 2 113 3.2E-24 T 22-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV RM25_RS10800 2cecf464894367dbe31906157a7ddb33 126 PANTHER PTHR37309 1 116 2.4E-23 T 22-04-2016 RM25_RS10800 2cecf464894367dbe31906157a7ddb33 126 PANTHER PTHR37309:SF1 1 116 2.4E-23 T 22-04-2016 RM25_RS06680 62484d5ebdd2a28046df73c5754ce17f 183 PANTHER PTHR33692 6 175 1.1E-37 T 22-04-2016 RM25_RS06680 62484d5ebdd2a28046df73c5754ce17f 183 Pfam PF05239 PRC-barrel domain 96 161 5.9E-7 T 22-04-2016 IPR027275 PRC-barrel domain RM25_RS06680 62484d5ebdd2a28046df73c5754ce17f 183 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 5 167 21.041 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RM25_RS06680 62484d5ebdd2a28046df73c5754ce17f 183 SUPERFAMILY SSF50447 6 86 4.24E-16 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RM25_RS06680 62484d5ebdd2a28046df73c5754ce17f 183 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 6 166 4.4E-37 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RM25_RS06680 62484d5ebdd2a28046df73c5754ce17f 183 SUPERFAMILY SSF50346 98 165 2.43E-14 T 22-04-2016 IPR011033 PRC-barrel-like RM25_RS06680 62484d5ebdd2a28046df73c5754ce17f 183 Gene3D G3DSA:2.40.30.60 5 93 1.6E-18 T 22-04-2016 IPR002676 RimM protein GO:0006364 RM25_RS06680 62484d5ebdd2a28046df73c5754ce17f 183 Pfam PF01782 RimM N-terminal domain 8 85 1.6E-19 T 22-04-2016 IPR002676 RimM protein GO:0006364 RM25_RS06680 62484d5ebdd2a28046df73c5754ce17f 183 Gene3D G3DSA:2.30.30.240 98 162 4.2E-17 T 22-04-2016 RM25_RS06880 dcadcc615ca1ea14c1f2192d45d9473e 173 SUPERFAMILY SSF55194 1 171 1.83E-61 T 22-04-2016 IPR023584 Ribosome recycling factor domain RM25_RS06880 dcadcc615ca1ea14c1f2192d45d9473e 173 PANTHER PTHR20982 1 173 1.4E-69 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RM25_RS06880 dcadcc615ca1ea14c1f2192d45d9473e 173 TIGRFAM TIGR00496 frr: ribosome recycling factor 1 173 2.9E-58 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RM25_RS06880 dcadcc615ca1ea14c1f2192d45d9473e 173 Pfam PF01765 Ribosome recycling factor 9 171 3.0E-55 T 22-04-2016 IPR023584 Ribosome recycling factor domain RM25_RS06880 dcadcc615ca1ea14c1f2192d45d9473e 173 Gene3D G3DSA:1.10.132.20 54 173 1.6E-38 T 22-04-2016 IPR023584 Ribosome recycling factor domain RM25_RS06880 dcadcc615ca1ea14c1f2192d45d9473e 173 Hamap MF_00040 Ribosome-recycling factor [frr]. 1 173 23.0 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 SUPERFAMILY SSF48592 6 133 1.91E-71 T 22-04-2016 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 SUPERFAMILY SSF48592 404 518 1.91E-71 T 22-04-2016 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 PRINTS PR00298 60kDa chaperonin signature 396 417 3.8E-69 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 PRINTS PR00298 60kDa chaperonin signature 82 109 3.8E-69 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 PRINTS PR00298 60kDa chaperonin signature 266 289 3.8E-69 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 PRINTS PR00298 60kDa chaperonin signature 26 52 3.8E-69 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 PRINTS PR00298 60kDa chaperonin signature 348 373 3.8E-69 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 SUPERFAMILY SSF54849 137 202 7.78E-27 T 22-04-2016 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 Gene3D G3DSA:3.50.7.10 195 368 1.9E-89 T 22-04-2016 IPR027409 GroEL-like apical domain RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 Hamap MF_00600 60 kDa chaperonin [groL]. 1 539 40.079 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 PANTHER PTHR11353 5 539 4.4E-217 T 22-04-2016 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 SUPERFAMILY SSF52029 184 374 2.99E-79 T 22-04-2016 IPR027409 GroEL-like apical domain RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 523 7.2E-241 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 Gene3D G3DSA:1.10.560.10 5 194 6.3E-48 T 22-04-2016 IPR027413 GroEL-like equatorial domain RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 Gene3D G3DSA:1.10.560.10 369 515 2.9E-35 T 22-04-2016 IPR027413 GroEL-like equatorial domain RM25_RS08655 bc91932970468e7d156dc26d8940553d 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 2.9E-91 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RM25_RS02135 e39158ecd17b831bc4f3501eb4ffda15 558 Pfam PF01268 Formate--tetrahydrofolate ligase 2 557 6.8E-255 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RM25_RS02135 e39158ecd17b831bc4f3501eb4ffda15 558 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RM25_RS02135 e39158ecd17b831bc4f3501eb4ffda15 558 PANTHER PTHR10025 1 557 0.0 T 22-04-2016 RM25_RS02135 e39158ecd17b831bc4f3501eb4ffda15 558 Gene3D G3DSA:3.10.410.10 447 534 4.7E-36 T 22-04-2016 RM25_RS02135 e39158ecd17b831bc4f3501eb4ffda15 558 Gene3D G3DSA:3.30.1510.10 129 247 1.2E-47 T 22-04-2016 RM25_RS02135 e39158ecd17b831bc4f3501eb4ffda15 558 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RM25_RS02135 e39158ecd17b831bc4f3501eb4ffda15 558 SUPERFAMILY SSF52540 4 556 5.67E-230 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02135 e39158ecd17b831bc4f3501eb4ffda15 558 Gene3D G3DSA:3.40.50.300 248 442 4.6E-143 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02135 e39158ecd17b831bc4f3501eb4ffda15 558 Gene3D G3DSA:3.40.50.300 13 128 4.6E-143 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02135 e39158ecd17b831bc4f3501eb4ffda15 558 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 558 46.778 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 PANTHER PTHR30477:SF1 2 305 1.1E-69 T 22-04-2016 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 PRINTS PR00690 Adhesin family signature 41 59 5.2E-9 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 PRINTS PR00690 Adhesin family signature 253 271 5.2E-9 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 PRINTS PR00690 Adhesin family signature 72 85 5.2E-9 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 PRINTS PR00690 Adhesin family signature 200 221 5.2E-9 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 Gene3D G3DSA:3.40.50.1980 195 311 3.0E-35 T 22-04-2016 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 SUPERFAMILY SSF53807 40 311 2.45E-70 T 22-04-2016 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 Gene3D G3DSA:3.40.50.1980 34 194 9.2E-43 T 22-04-2016 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 PRINTS PR00691 Adhesin B signature 291 309 1.8E-10 T 22-04-2016 IPR006129 Adhesin B GO:0007155 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 PRINTS PR00691 Adhesin B signature 249 266 1.8E-10 T 22-04-2016 IPR006129 Adhesin B GO:0007155 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 PRINTS PR00691 Adhesin B signature 66 84 1.8E-10 T 22-04-2016 IPR006129 Adhesin B GO:0007155 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 PRINTS PR00691 Adhesin B signature 144 163 1.8E-10 T 22-04-2016 IPR006129 Adhesin B GO:0007155 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 PRINTS PR00691 Adhesin B signature 200 217 1.8E-10 T 22-04-2016 IPR006129 Adhesin B GO:0007155 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 PRINTS PR00691 Adhesin B signature 41 62 1.8E-10 T 22-04-2016 IPR006129 Adhesin B GO:0007155 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 Pfam PF01297 Zinc-uptake complex component A periplasmic 44 311 5.6E-69 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 RM25_RS06190 4620e8ddb2a1b1c81d50a17dbea4ddd3 315 PANTHER PTHR30477 2 305 1.1E-69 T 22-04-2016 RM25_RS11495 efc1e233fbd6e929820d9fb3d6b114cf 834 PANTHER PTHR33406 1 97 3.8E-168 T 22-04-2016 RM25_RS11495 efc1e233fbd6e929820d9fb3d6b114cf 834 PANTHER PTHR33406 171 817 3.8E-168 T 22-04-2016 RM25_RS11495 efc1e233fbd6e929820d9fb3d6b114cf 834 Gene3D G3DSA:1.20.1640.10 574 793 1.2E-29 T 22-04-2016 RM25_RS11495 efc1e233fbd6e929820d9fb3d6b114cf 834 Gene3D G3DSA:1.20.1640.10 251 435 3.8E-27 T 22-04-2016 RM25_RS11495 efc1e233fbd6e929820d9fb3d6b114cf 834 SUPERFAMILY SSF82866 558 787 1.09E-25 T 22-04-2016 RM25_RS11495 efc1e233fbd6e929820d9fb3d6b114cf 834 Pfam PF03176 MMPL family 173 436 1.8E-44 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RM25_RS11495 efc1e233fbd6e929820d9fb3d6b114cf 834 Pfam PF03176 MMPL family 517 787 2.1E-32 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RM25_RS11495 efc1e233fbd6e929820d9fb3d6b114cf 834 SUPERFAMILY SSF82866 222 429 7.85E-30 T 22-04-2016 RM25_RS11495 efc1e233fbd6e929820d9fb3d6b114cf 834 PANTHER PTHR33406:SF5 1 97 3.8E-168 T 22-04-2016 RM25_RS11495 efc1e233fbd6e929820d9fb3d6b114cf 834 PANTHER PTHR33406:SF5 171 817 3.8E-168 T 22-04-2016 RM25_RS03120 b843b9270d2c469c99a3211f49462938 318 Gene3D G3DSA:1.10.3470.10 12 316 1.9E-62 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RM25_RS03120 b843b9270d2c469c99a3211f49462938 318 PANTHER PTHR30472:SF27 10 317 4.9E-142 T 22-04-2016 RM25_RS03120 b843b9270d2c469c99a3211f49462938 318 Pfam PF01032 FecCD transport family 14 313 4.8E-59 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RM25_RS03120 b843b9270d2c469c99a3211f49462938 318 PANTHER PTHR30472 10 317 4.9E-142 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RM25_RS03120 b843b9270d2c469c99a3211f49462938 318 SUPERFAMILY SSF81345 11 314 3.01E-60 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RM25_RS00170 d9ab4b16265efa35292dfe6b2bcee821 260 PANTHER PTHR30146 22 260 1.2E-42 T 22-04-2016 RM25_RS00170 d9ab4b16265efa35292dfe6b2bcee821 260 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 91 258 3.5E-9 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain RM25_RS00170 d9ab4b16265efa35292dfe6b2bcee821 260 Gene3D G3DSA:3.40.50.2300 191 260 1.7E-13 T 22-04-2016 RM25_RS00170 d9ab4b16265efa35292dfe6b2bcee821 260 Gene3D G3DSA:1.10.260.40 24 75 9.7E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS00170 d9ab4b16265efa35292dfe6b2bcee821 260 Gene3D G3DSA:3.40.50.2300 76 190 6.4E-22 T 22-04-2016 RM25_RS00170 d9ab4b16265efa35292dfe6b2bcee821 260 Pfam PF00356 Bacterial regulatory proteins, lacI family 25 70 1.3E-9 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RM25_RS00170 d9ab4b16265efa35292dfe6b2bcee821 260 SMART SM00354 23 93 6.7E-10 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RM25_RS00170 d9ab4b16265efa35292dfe6b2bcee821 260 SUPERFAMILY SSF47413 22 81 1.88E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS00170 d9ab4b16265efa35292dfe6b2bcee821 260 SUPERFAMILY SSF53822 87 260 9.21E-22 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RM25_RS06500 02195a187ff6258f97f87002ba801674 303 Pfam PF00696 Amino acid kinase family 32 272 1.8E-45 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RM25_RS06500 02195a187ff6258f97f87002ba801674 303 Hamap MF_00082_B Acetylglutamate kinase [argB]. 30 296 34.141 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS06500 02195a187ff6258f97f87002ba801674 303 SUPERFAMILY SSF53633 13 297 1.44E-87 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RM25_RS06500 02195a187ff6258f97f87002ba801674 303 PIRSF PIRSF000728 17 296 1.5E-102 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS06500 02195a187ff6258f97f87002ba801674 303 PRINTS PR00474 Glutamate 5-kinase family signature 63 77 4.4E-9 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RM25_RS06500 02195a187ff6258f97f87002ba801674 303 PRINTS PR00474 Glutamate 5-kinase family signature 195 222 4.4E-9 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RM25_RS06500 02195a187ff6258f97f87002ba801674 303 PRINTS PR00474 Glutamate 5-kinase family signature 246 266 4.4E-9 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RM25_RS06500 02195a187ff6258f97f87002ba801674 303 TIGRFAM TIGR00761 argB: acetylglutamate kinase 34 270 4.1E-78 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS06500 02195a187ff6258f97f87002ba801674 303 Gene3D G3DSA:3.40.1160.10 31 295 4.0E-100 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RM25_RS06500 02195a187ff6258f97f87002ba801674 303 PANTHER PTHR23342 1 295 8.7E-111 T 22-04-2016 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 TIGRFAM TIGR00016 ackA: acetate kinase 3 393 5.3E-137 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 SUPERFAMILY SSF53067 155 394 6.12E-81 T 22-04-2016 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 PRINTS PR00471 Acetate kinase family signature 298 311 3.1E-43 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 PRINTS PR00471 Acetate kinase family signature 172 185 3.1E-43 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 PRINTS PR00471 Acetate kinase family signature 5 16 3.1E-43 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 PRINTS PR00471 Acetate kinase family signature 320 336 3.1E-43 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 PRINTS PR00471 Acetate kinase family signature 375 387 3.1E-43 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 PRINTS PR00471 Acetate kinase family signature 202 223 3.1E-43 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 Pfam PF00871 Acetokinase family 5 388 9.8E-141 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 SUPERFAMILY SSF53067 4 193 7.77E-61 T 22-04-2016 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 Gene3D G3DSA:3.30.420.40 5 203 6.8E-10 T 22-04-2016 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 PANTHER PTHR21060:SF11 1 394 5.3E-186 T 22-04-2016 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 Gene3D G3DSA:3.30.420.40 204 393 8.4E-72 T 22-04-2016 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 Hamap MF_00020 Acetate kinase [ackA]. 1 396 168.472 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 PANTHER PTHR21060 1 394 5.3E-186 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS00390 93aad50bdf70c03e725f28f527c16396 396 PIRSF PIRSF000722 1 396 1.8E-141 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RM25_RS05980 01d84b0b15f14175b493864a7ea6758e 436 SUPERFAMILY SSF51261 245 433 5.23E-41 T 22-04-2016 IPR011055 Duplicated hybrid motif RM25_RS05980 01d84b0b15f14175b493864a7ea6758e 436 PANTHER PTHR21666 20 433 7.6E-34 T 22-04-2016 RM25_RS05980 01d84b0b15f14175b493864a7ea6758e 436 Gene3D G3DSA:2.70.70.10 276 433 9.8E-39 T 22-04-2016 RM25_RS05980 01d84b0b15f14175b493864a7ea6758e 436 Pfam PF01551 Peptidase family M23 328 428 7.3E-23 T 22-04-2016 IPR016047 Peptidase M23 RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 6.3E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 6.3E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 6.3E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 PANTHER PTHR26402 11 220 5.4E-100 T 22-04-2016 RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 SMART SM00448 11 124 7.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 SUPERFAMILY SSF46894 146 220 5.78E-23 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 SUPERFAMILY SSF52172 12 135 4.55E-32 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 SMART SM00421 156 213 8.9E-25 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 Gene3D G3DSA:3.40.50.2300 12 163 8.1E-36 T 22-04-2016 RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 PANTHER PTHR26402:SF583 11 220 5.4E-100 T 22-04-2016 RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 Pfam PF00072 Response regulator receiver domain 13 123 1.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 Gene3D G3DSA:1.10.10.10 164 219 2.5E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08360 82fd2b05a80a9b02bff83fdffcd79851 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 213 6.0E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00240 ac027bbf7fee68ef6f6a2366cfdddb6d 169 SUPERFAMILY SSF55469 1 168 1.57E-35 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RM25_RS00240 ac027bbf7fee68ef6f6a2366cfdddb6d 169 PANTHER PTHR23026 1 168 5.1E-22 T 22-04-2016 RM25_RS00240 ac027bbf7fee68ef6f6a2366cfdddb6d 169 Gene3D G3DSA:3.40.109.10 2 168 1.9E-36 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RM25_RS00240 ac027bbf7fee68ef6f6a2366cfdddb6d 169 Pfam PF00881 Nitroreductase family 9 66 2.8E-12 T 22-04-2016 IPR029479 Nitroreductase RM25_RS06535 0996d8807e0dbbfc9567aba839b415fe 123 Pfam PF00453 Ribosomal protein L20 3 109 7.0E-45 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RM25_RS06535 0996d8807e0dbbfc9567aba839b415fe 123 Gene3D G3DSA:1.10.1900.20 56 116 2.1E-30 T 22-04-2016 RM25_RS06535 0996d8807e0dbbfc9567aba839b415fe 123 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.6E-37 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RM25_RS06535 0996d8807e0dbbfc9567aba839b415fe 123 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.6E-37 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RM25_RS06535 0996d8807e0dbbfc9567aba839b415fe 123 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.6E-37 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RM25_RS06535 0996d8807e0dbbfc9567aba839b415fe 123 PANTHER PTHR10986 2 118 8.7E-63 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RM25_RS06535 0996d8807e0dbbfc9567aba839b415fe 123 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.627 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RM25_RS06535 0996d8807e0dbbfc9567aba839b415fe 123 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RM25_RS06535 0996d8807e0dbbfc9567aba839b415fe 123 SUPERFAMILY SSF74731 3 115 7.19E-46 T 22-04-2016 RM25_RS06535 0996d8807e0dbbfc9567aba839b415fe 123 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 9.0E-21 T 22-04-2016 RM25_RS06535 0996d8807e0dbbfc9567aba839b415fe 123 PANTHER PTHR10986:SF12 2 118 8.7E-63 T 22-04-2016 RM25_RS06535 0996d8807e0dbbfc9567aba839b415fe 123 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.3E-45 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 19 310 2.4E-112 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 SMART SM00662 18 225 3.4E-84 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 PANTHER PTHR32108 12 324 6.2E-132 T 22-04-2016 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 SUPERFAMILY SSF56553 48 169 4.06E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 149 2.2E-24 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 302 2.3E-27 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 Gene3D G3DSA:2.170.120.12 56 168 3.0E-44 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 Gene3D G3DSA:1.10.150.20 243 317 3.1E-32 T 22-04-2016 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 311 34.39 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 Gene3D G3DSA:3.30.1360.10 7 55 3.4E-10 T 22-04-2016 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 218 1.6E-18 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 PANTHER PTHR32108:SF0 12 324 6.2E-132 T 22-04-2016 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 250 322 2.0E-31 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 SUPERFAMILY SSF47789 248 317 1.14E-24 T 22-04-2016 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 SUPERFAMILY SSF55257 170 224 3.4E-25 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS02790 010afc0852b73549298ae10210aecc0d 339 SUPERFAMILY SSF55257 15 48 3.4E-25 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS00880 de0ffd9e5840646172cf11d12646f90f 500 PANTHER PTHR30365 1 323 2.7E-173 T 22-04-2016 RM25_RS00880 de0ffd9e5840646172cf11d12646f90f 500 PANTHER PTHR30365 354 496 2.7E-173 T 22-04-2016 RM25_RS00880 de0ffd9e5840646172cf11d12646f90f 500 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 480 2.4E-163 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 RM25_RS00880 de0ffd9e5840646172cf11d12646f90f 500 PIRSF PIRSF006446 1 495 5.8E-135 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 RM25_RS00880 de0ffd9e5840646172cf11d12646f90f 500 PANTHER PTHR30365:SF0 1 323 2.7E-173 T 22-04-2016 RM25_RS00880 de0ffd9e5840646172cf11d12646f90f 500 PANTHER PTHR30365:SF0 354 496 2.7E-173 T 22-04-2016 RM25_RS11410 5da39025949f2f6863075cb77aff892e 648 SUPERFAMILY SSF158694 465 629 1.96E-29 T 22-04-2016 RM25_RS11410 5da39025949f2f6863075cb77aff892e 648 Pfam PF09349 OHCU decarboxylase 470 625 4.1E-21 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RM25_RS11410 5da39025949f2f6863075cb77aff892e 648 Gene3D G3DSA:1.10.3330.10 472 631 2.3E-30 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RM25_RS11410 5da39025949f2f6863075cb77aff892e 648 TIGRFAM TIGR03173 pbuX: xanthine permease 26 444 6.8E-141 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 RM25_RS11410 5da39025949f2f6863075cb77aff892e 648 PANTHER PTHR11119 14 442 1.4E-98 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RM25_RS11410 5da39025949f2f6863075cb77aff892e 648 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 360 380 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RM25_RS11410 5da39025949f2f6863075cb77aff892e 648 Pfam PF00860 Permease family 22 412 5.8E-92 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RM25_RS11410 5da39025949f2f6863075cb77aff892e 648 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 442 2.0E-101 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RM25_RS09540 d115559fdf9625cfdb5871675bda7944 288 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 26 285 2.4E-87 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 RM25_RS09540 d115559fdf9625cfdb5871675bda7944 288 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 60 73 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RM25_RS09540 d115559fdf9625cfdb5871675bda7944 288 PANTHER PTHR20941:SF1 24 287 4.1E-108 T 22-04-2016 RM25_RS09540 d115559fdf9625cfdb5871675bda7944 288 Pfam PF00809 Pterin binding enzyme 27 271 7.8E-80 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RM25_RS09540 d115559fdf9625cfdb5871675bda7944 288 SUPERFAMILY SSF51717 22 286 1.1E-88 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RM25_RS09540 d115559fdf9625cfdb5871675bda7944 288 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 26 41 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RM25_RS09540 d115559fdf9625cfdb5871675bda7944 288 Gene3D G3DSA:3.20.20.20 23 286 2.1E-98 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RM25_RS09540 d115559fdf9625cfdb5871675bda7944 288 PANTHER PTHR20941 24 287 4.1E-108 T 22-04-2016 RM25_RS03985 1c1eea7737cd9b2803ba0bd398afce11 256 SUPERFAMILY SSF52374 29 224 7.19E-49 T 22-04-2016 RM25_RS03985 1c1eea7737cd9b2803ba0bd398afce11 256 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 33 95 5.3E-10 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RM25_RS03985 1c1eea7737cd9b2803ba0bd398afce11 256 Pfam PF01467 Cytidylyltransferase-like 34 198 4.7E-27 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RM25_RS03985 1c1eea7737cd9b2803ba0bd398afce11 256 PANTHER PTHR12039 8 255 5.6E-49 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RM25_RS03985 1c1eea7737cd9b2803ba0bd398afce11 256 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 34 223 1.6E-51 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RM25_RS03985 1c1eea7737cd9b2803ba0bd398afce11 256 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 30 224 29.06 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RM25_RS03985 1c1eea7737cd9b2803ba0bd398afce11 256 Gene3D G3DSA:3.40.50.620 31 225 3.9E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS03050 39d858160fa725abfcaf7fd3cfc4274f 506 PANTHER PTHR38464 7 504 2.5E-168 T 22-04-2016 RM25_RS03050 39d858160fa725abfcaf7fd3cfc4274f 506 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 9 309 3.0E-102 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 RM25_RS03050 39d858160fa725abfcaf7fd3cfc4274f 506 SUPERFAMILY SSF53743 9 332 1.01E-106 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 RM25_RS03050 39d858160fa725abfcaf7fd3cfc4274f 506 PIRSF PIRSF001478 7 504 1.2E-211 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 RM25_RS03050 39d858160fa725abfcaf7fd3cfc4274f 506 SUPERFAMILY SSF50443 334 502 1.36E-61 T 22-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal RM25_RS03050 39d858160fa725abfcaf7fd3cfc4274f 506 Pfam PF11762 L-arabinose isomerase C-terminal domain 367 480 1.0E-43 T 22-04-2016 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4|UniPathway: UPA00145 RM25_RS03050 39d858160fa725abfcaf7fd3cfc4274f 506 Hamap MF_00519 L-arabinose isomerase [araA]. 6 481 58.043 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 RM25_RS03050 39d858160fa725abfcaf7fd3cfc4274f 506 PANTHER PTHR38464:SF1 7 504 2.5E-168 T 22-04-2016 RM25_RS03050 39d858160fa725abfcaf7fd3cfc4274f 506 Pfam PF02610 L-arabinose isomerase 10 363 4.4E-159 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 Gene3D G3DSA:2.30.42.10 392 478 7.5E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 SUPERFAMILY SSF50494 175 377 2.38E-37 T 22-04-2016 IPR009003 Peptidase S1, PA clan RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 Gene3D G3DSA:2.40.10.10 191 270 3.6E-22 T 22-04-2016 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 Pfam PF13365 Trypsin-like peptidase domain 198 342 1.9E-24 T 22-04-2016 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 SUPERFAMILY SSF50156 403 478 1.31E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 PANTHER PTHR22939:SF79 80 478 1.3E-53 T 22-04-2016 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 Gene3D G3DSA:2.40.10.10 271 383 3.6E-17 T 22-04-2016 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 PRINTS PR00834 HtrA/DegQ protease family signature 335 352 1.9E-20 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 PRINTS PR00834 HtrA/DegQ protease family signature 313 330 1.9E-20 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 PRINTS PR00834 HtrA/DegQ protease family signature 229 249 1.9E-20 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 PRINTS PR00834 HtrA/DegQ protease family signature 207 219 1.9E-20 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 PRINTS PR00834 HtrA/DegQ protease family signature 421 433 1.9E-20 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 PRINTS PR00834 HtrA/DegQ protease family signature 269 293 1.9E-20 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 Pfam PF13180 PDZ domain 392 472 6.5E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 PANTHER PTHR22939 80 478 1.3E-53 T 22-04-2016 RM25_RS01065 5eca55aa0f52752c0dba2a575a6de3df 480 SMART SM00228 392 463 2.3E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RM25_RS07545 da6c25992ee5b29ebddb4480648c9097 411 SUPERFAMILY SSF54631 262 392 1.39E-22 T 22-04-2016 RM25_RS07545 da6c25992ee5b29ebddb4480648c9097 411 Pfam PF00571 CBS domain 332 387 0.0026 T 22-04-2016 IPR000644 CBS domain RM25_RS07545 da6c25992ee5b29ebddb4480648c9097 411 PANTHER PTHR11911 30 165 1.3E-29 T 22-04-2016 RM25_RS07545 da6c25992ee5b29ebddb4480648c9097 411 PANTHER PTHR11911 234 397 1.3E-29 T 22-04-2016 RM25_RS07545 da6c25992ee5b29ebddb4480648c9097 411 PANTHER PTHR11911:SF108 30 165 1.3E-29 T 22-04-2016 RM25_RS07545 da6c25992ee5b29ebddb4480648c9097 411 PANTHER PTHR11911:SF108 234 397 1.3E-29 T 22-04-2016 RM25_RS07545 da6c25992ee5b29ebddb4480648c9097 411 Gene3D G3DSA:1.25.60.10 148 256 7.4E-34 T 22-04-2016 RM25_RS07545 da6c25992ee5b29ebddb4480648c9097 411 Pfam PF03448 MgtE intracellular N domain 161 261 5.3E-25 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain RM25_RS07545 da6c25992ee5b29ebddb4480648c9097 411 Gene3D G3DSA:3.10.580.10 257 387 4.7E-17 T 22-04-2016 RM25_RS07545 da6c25992ee5b29ebddb4480648c9097 411 SUPERFAMILY SSF158791 148 261 3.79E-29 T 22-04-2016 RM25_RS07545 da6c25992ee5b29ebddb4480648c9097 411 SMART SM00924 161 264 1.6E-30 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 Pfam PF14492 Elongation Factor G, domain II 416 487 2.7E-21 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 SMART SM00838 612 700 3.1E-17 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 SUPERFAMILY SSF50447 263 414 1.67E-21 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 SUPERFAMILY SSF54211 493 606 4.55E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 Gene3D G3DSA:3.30.70.870 418 488 2.9E-21 T 22-04-2016 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 Gene3D G3DSA:3.40.50.300 12 281 2.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 Pfam PF03764 Elongation factor G, domain IV 492 606 1.1E-36 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 Pfam PF00679 Elongation factor G C-terminus 613 699 7.6E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 SUPERFAMILY SSF54980 613 702 3.17E-20 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 SMART SM00889 492 610 9.1E-54 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 SUPERFAMILY SSF54980 417 493 1.98E-16 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 Pfam PF00009 Elongation factor Tu GTP binding domain 17 275 1.5E-23 T 22-04-2016 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 PRINTS PR00315 GTP-binding elongation factor signature 19 32 1.9E-6 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.9E-6 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.9E-6 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 Gene3D G3DSA:2.40.30.10 301 417 1.9E-23 T 22-04-2016 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 PANTHER PTHR23115:SF98 297 704 6.0E-208 T 22-04-2016 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 PANTHER PTHR23115:SF98 250 280 6.0E-208 T 22-04-2016 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 PANTHER PTHR23115:SF98 1 170 6.0E-208 T 22-04-2016 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 Gene3D G3DSA:3.30.70.240 613 698 6.3E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 18 142 1.1E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 PANTHER PTHR23115 297 704 6.0E-208 T 22-04-2016 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 PANTHER PTHR23115 250 280 6.0E-208 T 22-04-2016 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 PANTHER PTHR23115 1 170 6.0E-208 T 22-04-2016 RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 SUPERFAMILY SSF52540 14 278 4.91E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02865 610104240d1e036fa73e8f10676e3ad3 705 Gene3D G3DSA:3.30.230.10 496 612 3.1E-45 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 Gene3D G3DSA:3.30.70.20 10 26 7.5E-11 T 22-04-2016 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 Gene3D G3DSA:3.30.70.20 162 196 7.5E-11 T 22-04-2016 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 478 2.7E-232 T 22-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 Gene3D G3DSA:1.10.3650.10 360 438 3.1E-26 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 PANTHER PTHR11938 1 31 2.6E-122 T 22-04-2016 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 PANTHER PTHR11938 171 301 2.6E-122 T 22-04-2016 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 PANTHER PTHR11938 135 144 2.6E-122 T 22-04-2016 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 Gene3D G3DSA:3.30.70.20 197 236 5.4E-25 T 22-04-2016 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 Pfam PF13247 4Fe-4S dicluster domain 176 272 8.4E-37 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 359 439 1.5E-26 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 Gene3D G3DSA:3.30.70.20 440 468 4.4E-70 T 22-04-2016 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 Gene3D G3DSA:3.30.70.20 237 359 4.4E-70 T 22-04-2016 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 PANTHER PTHR11938:SF8 1 31 2.6E-122 T 22-04-2016 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 PANTHER PTHR11938:SF8 171 301 2.6E-122 T 22-04-2016 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 PANTHER PTHR11938:SF8 135 144 2.6E-122 T 22-04-2016 RM25_RS10140 bf930cd46fa9732145c3be669638bbab 503 SUPERFAMILY SSF54862 1 471 1.04E-161 T 22-04-2016 RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 Gene3D G3DSA:3.20.20.70 439 792 2.8E-93 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 SUPERFAMILY SSF69336 1218 1477 2.88E-82 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 Gene3D G3DSA:3.20.20.70 839 1203 3.4E-173 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 Pfam PF01645 Conserved region in glutamate synthase 806 1169 1.7E-152 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 PANTHER PTHR11938 8 1481 0.0 T 22-04-2016 RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 Pfam PF00310 Glutamine amidotransferases class-II 19 427 6.1E-174 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 Gene3D G3DSA:2.160.20.60 1226 1491 6.3E-93 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 Pfam PF04898 Glutamate synthase central domain 454 741 2.1E-101 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 PANTHER PTHR11938:SF1 8 1481 0.0 T 22-04-2016 RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 Pfam PF01493 GXGXG motif 1249 1428 1.1E-72 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 SUPERFAMILY SSF51395 443 1205 1.06E-248 T 22-04-2016 RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 Gene3D G3DSA:3.60.20.10 19 438 1.1E-176 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RM25_RS04950 626155e0a22305f5a89789e6ddef3ced 1502 SUPERFAMILY SSF56235 19 429 1.12E-145 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RM25_RS09955 d0d7d3e685c930fa1efccd19e8fa6444 155 Gene3D G3DSA:3.40.50.960 11 155 2.8E-55 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS09955 d0d7d3e685c930fa1efccd19e8fa6444 155 PANTHER PTHR21058 11 155 1.8E-53 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS09955 d0d7d3e685c930fa1efccd19e8fa6444 155 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 15 150 2.9E-49 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS09955 d0d7d3e685c930fa1efccd19e8fa6444 155 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 16 149 2.6E-38 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS09955 d0d7d3e685c930fa1efccd19e8fa6444 155 SUPERFAMILY SSF52121 12 155 2.35E-49 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS09955 d0d7d3e685c930fa1efccd19e8fa6444 155 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 155 26.869 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS09550 a0e9b37f4e3cadf7fc043e7a52f13fde 203 Pfam PF01227 GTP cyclohydrolase I 22 199 9.0E-73 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RM25_RS09550 a0e9b37f4e3cadf7fc043e7a52f13fde 203 PANTHER PTHR11109 20 199 1.6E-99 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RM25_RS09550 a0e9b37f4e3cadf7fc043e7a52f13fde 203 Gene3D G3DSA:1.10.286.10 18 68 2.2E-21 T 22-04-2016 RM25_RS09550 a0e9b37f4e3cadf7fc043e7a52f13fde 203 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 18 200 40.519 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RM25_RS09550 a0e9b37f4e3cadf7fc043e7a52f13fde 203 Gene3D G3DSA:3.30.1130.10 71 200 1.2E-55 T 22-04-2016 RM25_RS09550 a0e9b37f4e3cadf7fc043e7a52f13fde 203 SUPERFAMILY SSF55620 13 199 2.37E-71 T 22-04-2016 RM25_RS09550 a0e9b37f4e3cadf7fc043e7a52f13fde 203 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 78 94 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RM25_RS09550 a0e9b37f4e3cadf7fc043e7a52f13fde 203 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 128 138 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RM25_RS09550 a0e9b37f4e3cadf7fc043e7a52f13fde 203 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 22 199 1.0E-69 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RM25_RS02645 6fa2a1a64db20a80e5c313ea0900e13a 139 PANTHER PTHR12220 1 139 2.7E-68 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RM25_RS02645 6fa2a1a64db20a80e5c313ea0900e13a 139 Gene3D G3DSA:3.90.1170.10 23 136 2.2E-50 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RM25_RS02645 6fa2a1a64db20a80e5c313ea0900e13a 139 SUPERFAMILY SSF54686 1 136 5.76E-55 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RM25_RS02645 6fa2a1a64db20a80e5c313ea0900e13a 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.4E-55 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RM25_RS02645 6fa2a1a64db20a80e5c313ea0900e13a 139 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.3E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RM25_RS02645 6fa2a1a64db20a80e5c313ea0900e13a 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.244 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RM25_RS02645 6fa2a1a64db20a80e5c313ea0900e13a 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02645 6fa2a1a64db20a80e5c313ea0900e13a 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02645 6fa2a1a64db20a80e5c313ea0900e13a 139 PRINTS PR00060 Ribosomal protein L16 signature 24 36 5.7E-38 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RM25_RS02645 6fa2a1a64db20a80e5c313ea0900e13a 139 PRINTS PR00060 Ribosomal protein L16 signature 88 117 5.7E-38 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RM25_RS02645 6fa2a1a64db20a80e5c313ea0900e13a 139 PRINTS PR00060 Ribosomal protein L16 signature 58 87 5.7E-38 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RM25_RS02645 6fa2a1a64db20a80e5c313ea0900e13a 139 PRINTS PR00060 Ribosomal protein L16 signature 42 53 5.7E-38 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 SMART SM01185 73 127 2.0E-26 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 Gene3D G3DSA:2.30.30.30 9 69 9.5E-28 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 ProSitePatterns PS01275 Elongation factor P signature. 156 175 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 SUPERFAMILY SSF50249 71 132 3.43E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 PANTHER PTHR30053 10 192 1.2E-81 T 22-04-2016 RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 Hamap MF_00141 Elongation factor P [efp]. 7 191 46.342 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 Pfam PF01132 Elongation factor P (EF-P) OB domain 74 127 9.8E-22 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 TIGRFAM TIGR00038 efp: translation elongation factor P 9 191 3.3E-73 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 Gene3D G3DSA:2.40.50.140 134 191 2.9E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 9 66 1.3E-24 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 Pfam PF09285 Elongation factor P, C-terminal 135 190 4.6E-24 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 SMART SM00841 135 190 7.6E-29 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 SUPERFAMILY SSF50104 8 69 2.71E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 PIRSF PIRSF005901 6 192 1.4E-64 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 Gene3D G3DSA:2.40.50.140 70 133 1.7E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05125 c47bd9ffd3c2b2bddfb26fe135d08d30 193 SUPERFAMILY SSF50249 135 191 1.44E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS02420 7ff697cd5d4ac0d4f7a82d7ad4b2ad2b 657 Gene3D G3DSA:3.40.390.10 442 657 1.2E-107 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RM25_RS02420 7ff697cd5d4ac0d4f7a82d7ad4b2ad2b 657 Gene3D G3DSA:3.40.390.10 282 402 1.2E-107 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RM25_RS02420 7ff697cd5d4ac0d4f7a82d7ad4b2ad2b 657 Pfam PF05649 Peptidase family M13 23 399 3.6E-88 T 22-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 RM25_RS02420 7ff697cd5d4ac0d4f7a82d7ad4b2ad2b 657 Pfam PF01431 Peptidase family M13 451 654 8.0E-69 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RM25_RS02420 7ff697cd5d4ac0d4f7a82d7ad4b2ad2b 657 PANTHER PTHR11733 15 657 4.9E-179 T 22-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 RM25_RS02420 7ff697cd5d4ac0d4f7a82d7ad4b2ad2b 657 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 443 455 7.9E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RM25_RS02420 7ff697cd5d4ac0d4f7a82d7ad4b2ad2b 657 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 555 566 7.9E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RM25_RS02420 7ff697cd5d4ac0d4f7a82d7ad4b2ad2b 657 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 461 473 7.9E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RM25_RS02420 7ff697cd5d4ac0d4f7a82d7ad4b2ad2b 657 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 482 498 7.9E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RM25_RS02420 7ff697cd5d4ac0d4f7a82d7ad4b2ad2b 657 PANTHER PTHR11733:SF65 15 657 4.9E-179 T 22-04-2016 RM25_RS02420 7ff697cd5d4ac0d4f7a82d7ad4b2ad2b 657 SUPERFAMILY SSF55486 9 657 2.2E-199 T 22-04-2016 RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 SMART SM00304 67 120 2.2E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 SUPERFAMILY SSF158472 67 116 6.8E-5 T 22-04-2016 RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 PANTHER PTHR24423 61 345 1.1E-63 T 22-04-2016 RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 SMART SM00387 230 344 1.2E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 Gene3D G3DSA:1.10.287.130 111 170 2.3E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 Pfam PF00672 HAMP domain 48 115 6.9E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 231 341 5.0E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 185 1.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 SUPERFAMILY SSF55874 175 342 3.41E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 SUPERFAMILY SSF47384 104 186 1.84E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 Gene3D G3DSA:3.30.565.10 171 342 9.5E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 295 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 321 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 341 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 267 281 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS11290 4752549d80bb689b90e10709ee34c0c4 351 SMART SM00388 121 185 3.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS07300 6f150765e2cdfc0e881fac6549af8678 127 Pfam PF11239 Protein of unknown function (DUF3040) 1 80 1.6E-23 T 22-04-2016 IPR021401 Protein of unknown function DUF3040 RM25_RS03115 f50089c089bd332dfb2be759162212b0 338 Gene3D G3DSA:3.40.50.1980 178 334 6.9E-26 T 22-04-2016 RM25_RS03115 f50089c089bd332dfb2be759162212b0 338 Gene3D G3DSA:3.40.50.1980 49 177 3.5E-21 T 22-04-2016 RM25_RS03115 f50089c089bd332dfb2be759162212b0 338 Pfam PF01497 Periplasmic binding protein 68 313 4.3E-39 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RM25_RS03115 f50089c089bd332dfb2be759162212b0 338 PANTHER PTHR30532 4 335 1.9E-67 T 22-04-2016 RM25_RS03115 f50089c089bd332dfb2be759162212b0 338 PANTHER PTHR30532:SF4 4 335 1.9E-67 T 22-04-2016 RM25_RS03115 f50089c089bd332dfb2be759162212b0 338 SUPERFAMILY SSF53807 48 319 3.92E-48 T 22-04-2016 RM25_RS01820 b200ed4c1ef05f3e0db35de64300fd36 522 Pfam PF06826 Predicted Permease Membrane Region 350 519 7.5E-29 T 22-04-2016 IPR006512 YidE/YbjL duplication RM25_RS01820 b200ed4c1ef05f3e0db35de64300fd36 522 Pfam PF06826 Predicted Permease Membrane Region 15 166 6.5E-22 T 22-04-2016 IPR006512 YidE/YbjL duplication RM25_RS01820 b200ed4c1ef05f3e0db35de64300fd36 522 Pfam PF02080 TrkA-C domain 272 336 1.5E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RM25_RS01820 b200ed4c1ef05f3e0db35de64300fd36 522 PANTHER PTHR30445:SF1 1 522 1.2E-84 T 22-04-2016 RM25_RS01820 b200ed4c1ef05f3e0db35de64300fd36 522 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 354 502 2.2E-28 T 22-04-2016 IPR006512 YidE/YbjL duplication RM25_RS01820 b200ed4c1ef05f3e0db35de64300fd36 522 SUPERFAMILY SSF116726 257 336 2.22E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RM25_RS01820 b200ed4c1ef05f3e0db35de64300fd36 522 Gene3D G3DSA:3.30.70.1450 264 336 1.5E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RM25_RS01820 b200ed4c1ef05f3e0db35de64300fd36 522 PANTHER PTHR30445 1 522 1.2E-84 T 22-04-2016 RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 328 2.0E-25 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 2.0E-29 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 Gene3D G3DSA:1.10.10.10 258 328 8.4E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 341 154.33 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 SMART SM00382 52 185 9.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 SUPERFAMILY SSF52540 21 252 2.99E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 SUPERFAMILY SSF46785 257 331 3.45E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 PANTHER PTHR13779 11 331 3.2E-156 T 22-04-2016 RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 Gene3D G3DSA:1.10.8.60 184 256 1.4E-31 T 22-04-2016 RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 PANTHER PTHR13779:SF25 11 331 3.2E-156 T 22-04-2016 RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 Gene3D G3DSA:3.40.50.300 21 173 5.5E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 236 1.0E-104 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RM25_RS05030 4d8e7b9afcf0f729853c46145501a5c5 341 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 327 5.6E-131 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 25 48 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 PANTHER PTHR13479:SF42 22 79 3.1E-26 T 22-04-2016 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 PRINTS PR00974 Ribosomal protein S18 family signature 64 74 6.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 PRINTS PR00974 Ribosomal protein S18 family signature 32 42 6.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 PRINTS PR00974 Ribosomal protein S18 family signature 50 64 6.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 PRINTS PR00974 Ribosomal protein S18 family signature 42 49 6.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 Pfam PF01084 Ribosomal protein S18 22 72 5.4E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 77 19.577 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 Gene3D G3DSA:4.10.640.10 12 77 9.4E-28 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 27 74 1.0E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 10 76 8.0E-24 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 PANTHER PTHR13479 22 79 3.1E-26 T 22-04-2016 RM25_RS11080 348a807dea73227a3d1ab089757dbb6b 79 SUPERFAMILY SSF46911 4 77 1.07E-24 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS01425 eaed80881748a5a7639d88201b2b1eb8 313 SUPERFAMILY SSF52980 169 288 1.5E-15 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RM25_RS01425 eaed80881748a5a7639d88201b2b1eb8 313 Gene3D G3DSA:3.40.1350.10 163 287 9.8E-15 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 RM25_RS01425 eaed80881748a5a7639d88201b2b1eb8 313 PANTHER PTHR30015:SF4 3 313 1.7E-75 T 22-04-2016 RM25_RS01425 eaed80881748a5a7639d88201b2b1eb8 313 Pfam PF14338 Mrr N-terminal domain 7 91 6.3E-27 T 22-04-2016 IPR025745 Restriction system protein Mrr-like N-terminal domain RM25_RS01425 eaed80881748a5a7639d88201b2b1eb8 313 PANTHER PTHR30015 3 313 1.7E-75 T 22-04-2016 RM25_RS01425 eaed80881748a5a7639d88201b2b1eb8 313 Pfam PF04471 Restriction endonuclease 166 285 3.8E-34 T 22-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 RM25_RS09115 f7be35bae183ae68000470e275b9639d 323 SUPERFAMILY SSF56300 165 319 1.9E-24 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS09115 f7be35bae183ae68000470e275b9639d 323 SUPERFAMILY SSF56300 57 136 1.9E-24 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS09115 f7be35bae183ae68000470e275b9639d 323 PANTHER PTHR31302 161 321 8.1E-37 T 22-04-2016 RM25_RS09115 f7be35bae183ae68000470e275b9639d 323 PANTHER PTHR31302 33 133 8.1E-37 T 22-04-2016 RM25_RS09115 f7be35bae183ae68000470e275b9639d 323 PANTHER PTHR31302:SF6 161 321 8.1E-37 T 22-04-2016 RM25_RS09115 f7be35bae183ae68000470e275b9639d 323 PANTHER PTHR31302:SF6 33 133 8.1E-37 T 22-04-2016 RM25_RS09115 f7be35bae183ae68000470e275b9639d 323 Gene3D G3DSA:3.60.21.10 60 269 2.6E-13 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS09115 f7be35bae183ae68000470e275b9639d 323 Pfam PF00149 Calcineurin-like phosphoesterase 61 251 1.9E-6 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 23 44 1.0E-43 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 88 104 1.0E-43 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 1.0E-43 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 52 76 1.0E-43 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 5 23 1.0E-43 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 64 4.7E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 Pfam PF01467 Cytidylyltransferase-like 9 135 6.2E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 Gene3D G3DSA:3.40.50.620 5 158 1.7E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 PANTHER PTHR21342:SF1 1 159 2.8E-62 T 22-04-2016 RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 158 2.9E-50 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 SUPERFAMILY SSF52374 6 156 3.94E-40 T 22-04-2016 RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 5 160 30.565 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RM25_RS06745 6e83fb8536e532f28d369c0d6bf15e97 161 PANTHER PTHR21342 1 159 2.8E-62 T 22-04-2016 RM25_RS08220 aaa46f3b90851ecf46c2b871e98469c8 132 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 1 120 17.657 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RM25_RS08220 aaa46f3b90851ecf46c2b871e98469c8 132 PANTHER PTHR28259 1 130 1.3E-31 T 22-04-2016 RM25_RS08220 aaa46f3b90851ecf46c2b871e98469c8 132 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 1 115 5.8E-21 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RM25_RS08220 aaa46f3b90851ecf46c2b871e98469c8 132 TIGRFAM TIGR00494 crcB: protein CrcB 1 119 4.6E-24 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 2.5E-21 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 PIRSF PIRSF001529 1 423 8.3E-136 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 1.2E-27 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 1.2E-27 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 1.2E-27 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 1.2E-27 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 1.2E-27 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 SUPERFAMILY SSF55681 133 417 9.36E-82 T 22-04-2016 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 PANTHER PTHR11778 1 422 3.6E-226 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 Gene3D G3DSA:1.10.287.40 1 100 1.7E-25 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 397 6.2E-27 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 PANTHER PTHR11778:SF8 1 422 3.6E-226 T 22-04-2016 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 419 37.148 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 SUPERFAMILY SSF46589 1 111 7.32E-21 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 414 1.6E-129 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RM25_RS00710 7f45b01aefaed0d760a33947e0bb4ddc 424 Gene3D G3DSA:3.30.930.10 104 418 6.3E-117 T 22-04-2016 RM25_RS11325 89baaca1beb2c46f760a299a3bed18c4 335 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 294 6.1E-55 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS11325 89baaca1beb2c46f760a299a3bed18c4 335 TIGRFAM TIGR03945 PLP_SbnA_fam: 2,3-diaminopropionate biosynthesis protein SbnA 6 310 5.3E-109 T 22-04-2016 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA RM25_RS11325 89baaca1beb2c46f760a299a3bed18c4 335 SUPERFAMILY SSF53686 4 313 5.37E-76 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS11325 89baaca1beb2c46f760a299a3bed18c4 335 PANTHER PTHR10314:SF109 4 314 2.7E-101 T 22-04-2016 RM25_RS11325 89baaca1beb2c46f760a299a3bed18c4 335 Gene3D G3DSA:3.40.50.1100 2 40 1.3E-51 T 22-04-2016 RM25_RS11325 89baaca1beb2c46f760a299a3bed18c4 335 Gene3D G3DSA:3.40.50.1100 153 312 1.3E-51 T 22-04-2016 RM25_RS11325 89baaca1beb2c46f760a299a3bed18c4 335 PANTHER PTHR10314 4 314 2.7E-101 T 22-04-2016 RM25_RS11325 89baaca1beb2c46f760a299a3bed18c4 335 Gene3D G3DSA:3.40.50.1100 41 145 3.0E-24 T 22-04-2016 RM25_RS03885 5c7e121bbb9ef66554b1ba28a6e8ee45 239 PANTHER PTHR12725 1 209 1.1E-25 T 22-04-2016 RM25_RS03885 5c7e121bbb9ef66554b1ba28a6e8ee45 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 116 197 9.6E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS03885 5c7e121bbb9ef66554b1ba28a6e8ee45 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 202 4.4E-21 T 22-04-2016 IPR023214 HAD-like domain RM25_RS03885 5c7e121bbb9ef66554b1ba28a6e8ee45 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 2.5E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS03885 5c7e121bbb9ef66554b1ba28a6e8ee45 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 116 129 2.5E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS03885 5c7e121bbb9ef66554b1ba28a6e8ee45 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 192 205 2.5E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS03885 5c7e121bbb9ef66554b1ba28a6e8ee45 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 163 2.5E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS03885 5c7e121bbb9ef66554b1ba28a6e8ee45 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 165 185 2.5E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS03885 5c7e121bbb9ef66554b1ba28a6e8ee45 239 Gene3D G3DSA:3.40.50.1000 2 215 2.3E-38 T 22-04-2016 IPR023214 HAD-like domain RM25_RS03885 5c7e121bbb9ef66554b1ba28a6e8ee45 239 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 108 203 1.0E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS03885 5c7e121bbb9ef66554b1ba28a6e8ee45 239 SUPERFAMILY SSF56784 1 213 1.6E-41 T 22-04-2016 IPR023214 HAD-like domain RM25_RS08065 4ce42d50833dff1e013e59915f7db064 475 PANTHER PTHR23501:SF31 8 469 1.3E-103 T 22-04-2016 RM25_RS08065 4ce42d50833dff1e013e59915f7db064 475 Gene3D G3DSA:1.20.1250.20 21 206 5.2E-27 T 22-04-2016 RM25_RS08065 4ce42d50833dff1e013e59915f7db064 475 Gene3D G3DSA:1.20.1250.20 274 474 2.7E-15 T 22-04-2016 RM25_RS08065 4ce42d50833dff1e013e59915f7db064 475 Pfam PF07690 Major Facilitator Superfamily 29 424 3.7E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS08065 4ce42d50833dff1e013e59915f7db064 475 PANTHER PTHR23501 8 469 1.3E-103 T 22-04-2016 RM25_RS08065 4ce42d50833dff1e013e59915f7db064 475 SUPERFAMILY SSF103473 260 470 8.63E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS08065 4ce42d50833dff1e013e59915f7db064 475 SUPERFAMILY SSF103473 13 208 8.63E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS09205 07f8098311c896ab7546ea98f7d93773 157 Gene3D G3DSA:2.60.200.20 65 155 7.6E-26 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RM25_RS09205 07f8098311c896ab7546ea98f7d93773 157 PANTHER PTHR21712:SF36 51 138 3.8E-22 T 22-04-2016 RM25_RS09205 07f8098311c896ab7546ea98f7d93773 157 SUPERFAMILY SSF49879 64 155 1.11E-24 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 RM25_RS09205 07f8098311c896ab7546ea98f7d93773 157 Pfam PF00498 FHA domain 85 149 3.1E-16 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RM25_RS09205 07f8098311c896ab7546ea98f7d93773 157 PANTHER PTHR21712 51 138 3.8E-22 T 22-04-2016 RM25_RS09205 07f8098311c896ab7546ea98f7d93773 157 SMART SM00240 83 134 1.7E-11 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RM25_RS09640 3ff6f1a8f1e314ff8f580571227c0d9b 349 PANTHER PTHR21600:SF3 63 258 2.1E-29 T 22-04-2016 RM25_RS09640 3ff6f1a8f1e314ff8f580571227c0d9b 349 Pfam PF04468 PSP1 C-terminal conserved region 62 146 4.2E-16 T 22-04-2016 IPR007557 PSP1, C-terminal RM25_RS09640 3ff6f1a8f1e314ff8f580571227c0d9b 349 PANTHER PTHR21600 63 258 2.1E-29 T 22-04-2016 RM25_RS11520 c10e58cb0004efd68b031a2c498e0b42 243 SMART SM00382 28 199 2.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS11520 c10e58cb0004efd68b031a2c498e0b42 243 PANTHER PTHR24220 5 231 2.0E-68 T 22-04-2016 RM25_RS11520 c10e58cb0004efd68b031a2c498e0b42 243 SUPERFAMILY SSF52540 4 213 2.05E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11520 c10e58cb0004efd68b031a2c498e0b42 243 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS11520 c10e58cb0004efd68b031a2c498e0b42 243 PANTHER PTHR24220:SF73 5 231 2.0E-68 T 22-04-2016 RM25_RS11520 c10e58cb0004efd68b031a2c498e0b42 243 Pfam PF00005 ABC transporter 20 154 1.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS11520 c10e58cb0004efd68b031a2c498e0b42 243 Gene3D G3DSA:3.40.50.300 7 226 5.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08950 2b0a1e07868888cf72da84b5ff33ed1c 289 SUPERFAMILY SSF51569 30 282 4.39E-32 T 22-04-2016 RM25_RS08950 2b0a1e07868888cf72da84b5ff33ed1c 289 Gene3D G3DSA:3.20.20.70 32 282 7.4E-33 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.6E-58 T 22-04-2016 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 Gene3D G3DSA:3.40.50.300 6 213 1.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 PANTHER PTHR23115:SF112 1 396 1.7E-236 T 22-04-2016 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 153 1.3E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 Gene3D G3DSA:2.40.30.10 214 300 4.7E-37 T 22-04-2016 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 SUPERFAMILY SSF52540 6 221 6.59E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 Pfam PF03143 Elongation factor Tu C-terminal domain 301 394 4.4E-30 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.6E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 PANTHER PTHR23115 1 396 1.7E-236 T 22-04-2016 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 PRINTS PR00315 GTP-binding elongation factor signature 96 107 4.1E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 PRINTS PR00315 GTP-binding elongation factor signature 60 68 4.1E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.1E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 PRINTS PR00315 GTP-binding elongation factor signature 80 90 4.1E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 PRINTS PR00315 GTP-binding elongation factor signature 133 142 4.1E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 SUPERFAMILY SSF50465 304 396 3.6E-33 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 SUPERFAMILY SSF50447 207 303 2.36E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 396 7.2E-215 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 Gene3D G3DSA:2.40.30.10 302 394 2.6E-43 T 22-04-2016 RM25_RS02580 ac75e0bd175fb70c3a7bae1f5d4ecf33 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 58.503 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RM25_RS06940 9828f6e013dc21d6ee13f8ad4e63a939 257 PANTHER PTHR24322:SF317 11 191 1.9E-33 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RM25_RS06940 9828f6e013dc21d6ee13f8ad4e63a939 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 3.6E-55 T 22-04-2016 RM25_RS06940 9828f6e013dc21d6ee13f8ad4e63a939 257 PANTHER PTHR24322 11 191 1.9E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06940 9828f6e013dc21d6ee13f8ad4e63a939 257 SUPERFAMILY SSF51735 5 252 3.26E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06940 9828f6e013dc21d6ee13f8ad4e63a939 257 PIRSF PIRSF000094 1 257 1.0E-71 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RM25_RS06940 9828f6e013dc21d6ee13f8ad4e63a939 257 Gene3D G3DSA:3.40.50.720 2 252 9.7E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PANTHER PTHR11946:SF7 258 283 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 SUPERFAMILY SSF50677 244 435 3.56E-50 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 Gene3D G3DSA:3.40.50.620 445 628 6.1E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 Gene3D G3DSA:3.40.50.620 20 240 6.1E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 170 186 2.0E-50 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 202 215 2.0E-50 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 233 252 2.0E-50 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 144 161 2.0E-50 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 582 592 2.0E-50 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 510 528 2.0E-50 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 549 571 2.0E-50 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 SUPERFAMILY SSF52374 20 244 4.98E-142 T 22-04-2016 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 SUPERFAMILY SSF52374 436 639 4.98E-142 T 22-04-2016 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 19 840 21.577 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 437 639 3.7E-16 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 Gene3D G3DSA:1.10.730.10 629 776 1.2E-29 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PANTHER PTHR11946 494 842 0.0 T 22-04-2016 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PANTHER PTHR11946 7 223 0.0 T 22-04-2016 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 Pfam PF08264 Anticodon-binding domain of tRNA 673 804 9.7E-16 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 Gene3D G3DSA:3.90.740.10 241 444 5.0E-54 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 239 423 6.2E-62 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PANTHER PTHR11946 306 476 0.0 T 22-04-2016 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PANTHER PTHR11946:SF7 306 476 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PANTHER PTHR11946:SF7 494 842 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PANTHER PTHR11946:SF7 7 223 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 SUPERFAMILY SSF47323 648 827 8.97E-24 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 PANTHER PTHR11946 258 283 0.0 T 22-04-2016 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS04025 ed02e3a96d2791183a32c406d6d82a97 842 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 23 596 1.6E-247 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RM25_RS01085 b9942408f4b68d7d993418c049c2e1f6 378 PANTHER PTHR10909 1 377 9.9E-113 T 22-04-2016 RM25_RS01085 b9942408f4b68d7d993418c049c2e1f6 378 Gene3D G3DSA:1.20.140.10 215 377 8.2E-46 T 22-04-2016 RM25_RS01085 b9942408f4b68d7d993418c049c2e1f6 378 PANTHER PTHR10909:SF305 1 377 9.9E-113 T 22-04-2016 RM25_RS01085 b9942408f4b68d7d993418c049c2e1f6 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 115 6.5E-16 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RM25_RS01085 b9942408f4b68d7d993418c049c2e1f6 378 SUPERFAMILY SSF47203 223 376 1.4E-39 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RM25_RS01085 b9942408f4b68d7d993418c049c2e1f6 378 Gene3D G3DSA:2.40.110.10 121 214 1.4E-21 T 22-04-2016 RM25_RS01085 b9942408f4b68d7d993418c049c2e1f6 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 224 372 3.4E-38 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RM25_RS01085 b9942408f4b68d7d993418c049c2e1f6 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 212 1.6E-17 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RM25_RS01085 b9942408f4b68d7d993418c049c2e1f6 378 SUPERFAMILY SSF56645 1 224 2.23E-48 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RM25_RS01085 b9942408f4b68d7d993418c049c2e1f6 378 Gene3D G3DSA:1.10.540.10 1 115 2.5E-19 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RM25_RS03060 8d57234e60e9c9b8fc571d519e17c59a 326 Gene3D G3DSA:3.40.50.2300 33 158 4.8E-25 T 22-04-2016 RM25_RS03060 8d57234e60e9c9b8fc571d519e17c59a 326 PANTHER PTHR32196:SF20 67 291 2.4E-48 T 22-04-2016 RM25_RS03060 8d57234e60e9c9b8fc571d519e17c59a 326 Gene3D G3DSA:3.40.50.2300 159 312 7.0E-40 T 22-04-2016 RM25_RS03060 8d57234e60e9c9b8fc571d519e17c59a 326 PANTHER PTHR32196 67 291 2.4E-48 T 22-04-2016 RM25_RS03060 8d57234e60e9c9b8fc571d519e17c59a 326 SUPERFAMILY SSF53822 35 309 1.57E-62 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RM25_RS03060 8d57234e60e9c9b8fc571d519e17c59a 326 Pfam PF13407 Periplasmic binding protein domain 39 298 5.4E-47 T 22-04-2016 IPR025997 Periplasmic binding protein RM25_RS10160 7d83d8e79d484658826ff8ac8046963a 139 Gene3D G3DSA:3.90.1170.40 3 136 6.2E-43 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS10160 7d83d8e79d484658826ff8ac8046963a 139 Pfam PF02391 MoaE protein 8 118 7.5E-34 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS10160 7d83d8e79d484658826ff8ac8046963a 139 PANTHER PTHR23404:SF2 8 135 2.3E-29 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS10160 7d83d8e79d484658826ff8ac8046963a 139 SUPERFAMILY SSF54690 8 136 8.11E-38 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS10160 7d83d8e79d484658826ff8ac8046963a 139 PANTHER PTHR23404 8 135 2.3E-29 T 22-04-2016 RM25_RS00400 804f8405eea6d9c6567013eea1ab6528 435 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 88 1.1E-6 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS00400 804f8405eea6d9c6567013eea1ab6528 435 PANTHER PTHR33498:SF1 45 434 3.6E-23 T 22-04-2016 RM25_RS00400 804f8405eea6d9c6567013eea1ab6528 435 Pfam PF01610 Transposase 164 419 1.1E-62 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS00400 804f8405eea6d9c6567013eea1ab6528 435 PANTHER PTHR33498 45 434 3.6E-23 T 22-04-2016 RM25_RS10670 804f8405eea6d9c6567013eea1ab6528 435 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 88 1.1E-6 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS10670 804f8405eea6d9c6567013eea1ab6528 435 PANTHER PTHR33498:SF1 45 434 3.6E-23 T 22-04-2016 RM25_RS10670 804f8405eea6d9c6567013eea1ab6528 435 Pfam PF01610 Transposase 164 419 1.1E-62 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS10670 804f8405eea6d9c6567013eea1ab6528 435 PANTHER PTHR33498 45 434 3.6E-23 T 22-04-2016 RM25_RS06430 b1c2da29854967059aca38532786f9a7 310 SUPERFAMILY SSF111331 9 298 6.67E-66 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RM25_RS06430 b1c2da29854967059aca38532786f9a7 310 Gene3D G3DSA:2.60.200.30 154 268 2.0E-30 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RM25_RS06430 b1c2da29854967059aca38532786f9a7 310 Gene3D G3DSA:3.40.50.10330 7 153 2.1E-28 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RM25_RS06430 b1c2da29854967059aca38532786f9a7 310 PANTHER PTHR20275 8 307 2.2E-50 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RM25_RS06430 b1c2da29854967059aca38532786f9a7 310 Pfam PF01513 ATP-NAD kinase 58 275 3.1E-50 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RM25_RS06430 b1c2da29854967059aca38532786f9a7 310 Hamap MF_00361 NAD kinase [nadK]. 8 292 26.868 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RM25_RS00090 7c16b173ae8b144245510eb92f1f91f1 265 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 4 261 4.4E-80 T 22-04-2016 IPR002737 MEMO1 family RM25_RS00090 7c16b173ae8b144245510eb92f1f91f1 265 Pfam PF01875 Memo-like protein 6 258 2.6E-43 T 22-04-2016 IPR002737 MEMO1 family RM25_RS00090 7c16b173ae8b144245510eb92f1f91f1 265 PANTHER PTHR11060 1 265 1.0E-52 T 22-04-2016 IPR002737 MEMO1 family RM25_RS00090 7c16b173ae8b144245510eb92f1f91f1 265 Hamap MF_00055 MEMO1 family protein . 2 262 51.728 T 22-04-2016 IPR002737 MEMO1 family RM25_RS00090 7c16b173ae8b144245510eb92f1f91f1 265 PANTHER PTHR11060:SF0 1 265 1.0E-52 T 22-04-2016 RM25_RS11140 e86e538ea7c7c47fb582d0bbb243a010 402 PANTHER PTHR11118:SF3 8 402 1.5E-149 T 22-04-2016 RM25_RS11140 e86e538ea7c7c47fb582d0bbb243a010 402 SUPERFAMILY SSF103365 17 402 1.57E-120 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 RM25_RS11140 e86e538ea7c7c47fb582d0bbb243a010 402 Pfam PF01139 tRNA-splicing ligase RtcB 31 402 3.4E-119 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 RM25_RS11140 e86e538ea7c7c47fb582d0bbb243a010 402 PANTHER PTHR11118 8 402 1.5E-149 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 RM25_RS09190 db3c88c182cbca4f2bcf066d5dc48c15 578 PANTHER PTHR10066 489 574 1.9E-104 T 22-04-2016 RM25_RS09190 db3c88c182cbca4f2bcf066d5dc48c15 578 PANTHER PTHR10066 1 473 1.9E-104 T 22-04-2016 RM25_RS09190 db3c88c182cbca4f2bcf066d5dc48c15 578 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 374 428 2.7E-4 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RM25_RS09190 db3c88c182cbca4f2bcf066d5dc48c15 578 Gene3D G3DSA:3.20.20.80 273 577 1.1E-45 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS09190 db3c88c182cbca4f2bcf066d5dc48c15 578 Gene3D G3DSA:2.60.120.260 3 168 5.1E-44 T 22-04-2016 IPR008979 Galactose-binding domain-like RM25_RS09190 db3c88c182cbca4f2bcf066d5dc48c15 578 Gene3D G3DSA:2.60.40.320 169 272 8.1E-11 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 RM25_RS09190 db3c88c182cbca4f2bcf066d5dc48c15 578 SUPERFAMILY SSF49303 192 274 6.04E-6 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 RM25_RS09190 db3c88c182cbca4f2bcf066d5dc48c15 578 PANTHER PTHR10066:SF70 489 574 1.9E-104 T 22-04-2016 RM25_RS09190 db3c88c182cbca4f2bcf066d5dc48c15 578 PANTHER PTHR10066:SF70 1 473 1.9E-104 T 22-04-2016 RM25_RS09190 db3c88c182cbca4f2bcf066d5dc48c15 578 SUPERFAMILY SSF49785 5 177 1.19E-35 T 22-04-2016 IPR008979 Galactose-binding domain-like RM25_RS09190 db3c88c182cbca4f2bcf066d5dc48c15 578 SUPERFAMILY SSF51445 271 450 4.51E-46 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS09190 db3c88c182cbca4f2bcf066d5dc48c15 578 SUPERFAMILY SSF51445 477 575 4.51E-46 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS05730 60aa20fc218001296610f7ca1c320202 211 Pfam PF16316 Domain of unknown function (DUF4956) 10 176 2.4E-53 T 22-04-2016 IPR032531 Protein of unknown function DUF4956 RM25_RS02350 2d7214cb7c0d7b128665aef5be07c7c7 440 PANTHER PTHR11993 22 335 2.6E-169 T 22-04-2016 RM25_RS02350 2d7214cb7c0d7b128665aef5be07c7c7 440 PANTHER PTHR11993 352 435 2.6E-169 T 22-04-2016 RM25_RS02350 2d7214cb7c0d7b128665aef5be07c7c7 440 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 28 440 42.355 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RM25_RS02350 2d7214cb7c0d7b128665aef5be07c7c7 440 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 151 440 5.7E-96 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 RM25_RS02350 2d7214cb7c0d7b128665aef5be07c7c7 440 Gene3D G3DSA:1.10.645.10 26 324 1.3E-53 T 22-04-2016 IPR029014 NiFe hydrogenase-like RM25_RS02350 2d7214cb7c0d7b128665aef5be07c7c7 440 Gene3D G3DSA:1.10.645.10 368 433 1.3E-53 T 22-04-2016 IPR029014 NiFe hydrogenase-like RM25_RS02350 2d7214cb7c0d7b128665aef5be07c7c7 440 PANTHER PTHR11993:SF28 22 335 2.6E-169 T 22-04-2016 RM25_RS02350 2d7214cb7c0d7b128665aef5be07c7c7 440 SUPERFAMILY SSF56762 342 440 2.22E-104 T 22-04-2016 IPR029014 NiFe hydrogenase-like RM25_RS02350 2d7214cb7c0d7b128665aef5be07c7c7 440 SUPERFAMILY SSF56762 45 315 2.22E-104 T 22-04-2016 IPR029014 NiFe hydrogenase-like RM25_RS02350 2d7214cb7c0d7b128665aef5be07c7c7 440 PANTHER PTHR11993:SF28 352 435 2.6E-169 T 22-04-2016 RM25_RS02350 2d7214cb7c0d7b128665aef5be07c7c7 440 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 35 440 1.5E-142 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RM25_RS03760 c99892be746299a7d86f1e7f60dac10e 678 Gene3D G3DSA:1.20.1050.40 19 143 4.8E-5 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RM25_RS03760 c99892be746299a7d86f1e7f60dac10e 678 PANTHER PTHR11804 1 674 2.6E-209 T 22-04-2016 RM25_RS03760 c99892be746299a7d86f1e7f60dac10e 678 SUPERFAMILY SSF55486 10 673 1.36E-126 T 22-04-2016 RM25_RS03760 c99892be746299a7d86f1e7f60dac10e 678 Gene3D G3DSA:3.40.390.10 359 499 2.7E-45 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RM25_RS03760 c99892be746299a7d86f1e7f60dac10e 678 Pfam PF01432 Peptidase family M3 228 674 2.5E-97 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 RM25_RS03760 c99892be746299a7d86f1e7f60dac10e 678 Gene3D G3DSA:1.10.1370.10 144 358 5.3E-85 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RM25_RS03760 c99892be746299a7d86f1e7f60dac10e 678 Gene3D G3DSA:1.10.1370.10 500 674 5.3E-85 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RM25_RS03760 c99892be746299a7d86f1e7f60dac10e 678 PANTHER PTHR11804:SF47 1 674 2.6E-209 T 22-04-2016 RM25_RS09425 a5ced3da611110fcfa795f17f8c3f8b3 330 PANTHER PTHR30480:SF7 44 315 3.8E-36 T 22-04-2016 RM25_RS09425 a5ced3da611110fcfa795f17f8c3f8b3 330 SUPERFAMILY SSF51445 21 325 1.58E-41 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS09425 a5ced3da611110fcfa795f17f8c3f8b3 330 PANTHER PTHR30480 44 315 3.8E-36 T 22-04-2016 RM25_RS09425 a5ced3da611110fcfa795f17f8c3f8b3 330 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 24 317 6.8E-33 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RM25_RS09425 a5ced3da611110fcfa795f17f8c3f8b3 330 Gene3D G3DSA:3.20.20.300 21 325 6.0E-51 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 1.43E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 PRINTS PR01703 Manganese superoxide dismutase signature 67 80 1.43E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 PRINTS PR01703 Manganese superoxide dismutase signature 160 172 1.43E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 PRINTS PR01703 Manganese superoxide dismutase signature 122 130 1.43E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 1.43E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 4 84 1.8E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 93 193 1.4E-34 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 PANTHER PTHR11404:SF27 1 200 3.3E-111 T 22-04-2016 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 SUPERFAMILY SSF54719 92 199 3.4E-41 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 Gene3D G3DSA:1.10.287.990 21 84 4.6E-26 T 22-04-2016 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 PANTHER PTHR11404 1 200 3.3E-111 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 SUPERFAMILY SSF46609 2 85 7.33E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 PIRSF PIRSF000349 1 202 4.0E-78 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RM25_RS02810 51110beb4fe7bf5f0751cb65592dea5b 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 162 169 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RM25_RS05100 3ec327bea113ac39119da639af347839 895 PRINTS PR00980 Alanyl-tRNA synthetase signature 287 303 4.0E-23 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RM25_RS05100 3ec327bea113ac39119da639af347839 895 PRINTS PR00980 Alanyl-tRNA synthetase signature 311 324 4.0E-23 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RM25_RS05100 3ec327bea113ac39119da639af347839 895 PRINTS PR00980 Alanyl-tRNA synthetase signature 237 250 4.0E-23 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RM25_RS05100 3ec327bea113ac39119da639af347839 895 PRINTS PR00980 Alanyl-tRNA synthetase signature 69 80 4.0E-23 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RM25_RS05100 3ec327bea113ac39119da639af347839 895 PRINTS PR00980 Alanyl-tRNA synthetase signature 204 215 4.0E-23 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RM25_RS05100 3ec327bea113ac39119da639af347839 895 SUPERFAMILY SSF101353 257 455 1.31E-52 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RM25_RS05100 3ec327bea113ac39119da639af347839 895 SUPERFAMILY SSF50447 468 566 1.69E-15 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RM25_RS05100 3ec327bea113ac39119da639af347839 895 Gene3D G3DSA:3.30.930.10 1 252 8.8E-82 T 22-04-2016 RM25_RS05100 3ec327bea113ac39119da639af347839 895 SUPERFAMILY SSF55681 2 256 1.99E-75 T 22-04-2016 RM25_RS05100 3ec327bea113ac39119da639af347839 895 SMART SM00863 667 711 3.9E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RM25_RS05100 3ec327bea113ac39119da639af347839 895 Pfam PF01411 tRNA synthetases class II (A) 5 568 1.7E-174 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RM25_RS05100 3ec327bea113ac39119da639af347839 895 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 667 711 1.0E-11 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RM25_RS05100 3ec327bea113ac39119da639af347839 895 PANTHER PTHR11777 1 211 0.0 T 22-04-2016 RM25_RS05100 3ec327bea113ac39119da639af347839 895 PANTHER PTHR11777 227 894 0.0 T 22-04-2016 RM25_RS05100 3ec327bea113ac39119da639af347839 895 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 893 151.597 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 RM25_RS05100 3ec327bea113ac39119da639af347839 895 Pfam PF02272 DHHA1 domain 817 886 1.3E-10 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RM25_RS05100 3ec327bea113ac39119da639af347839 895 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 872 2.4E-231 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RM25_RS05100 3ec327bea113ac39119da639af347839 895 PANTHER PTHR11777:SF9 1 211 0.0 T 22-04-2016 RM25_RS05100 3ec327bea113ac39119da639af347839 895 PANTHER PTHR11777:SF9 227 894 0.0 T 22-04-2016 RM25_RS05100 3ec327bea113ac39119da639af347839 895 SUPERFAMILY SSF55186 571 718 2.88E-38 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RM25_RS07255 0e0d7f06c12d398308cee6d8af8c298b 421 PANTHER PTHR30474 30 409 1.9E-106 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RM25_RS07255 0e0d7f06c12d398308cee6d8af8c298b 421 Pfam PF01098 Cell cycle protein 36 391 1.7E-77 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RM25_RS07255 0e0d7f06c12d398308cee6d8af8c298b 421 PANTHER PTHR30474:SF2 30 409 1.9E-106 T 22-04-2016 RM25_RS00565 234883535640b9b0168d381789ec2843 148 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 142 5.8E-53 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS00565 234883535640b9b0168d381789ec2843 148 SUPERFAMILY SSF89623 1 142 1.44E-56 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS00565 234883535640b9b0168d381789ec2843 148 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 141 6.3E-56 T 22-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 RM25_RS00565 234883535640b9b0168d381789ec2843 148 PIRSF PIRSF005384 1 145 2.7E-55 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS00565 234883535640b9b0168d381789ec2843 148 Pfam PF02502 Ribose/Galactose Isomerase 3 140 1.9E-54 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS00565 234883535640b9b0168d381789ec2843 148 Gene3D G3DSA:3.40.1400.10 1 142 2.9E-61 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS00565 234883535640b9b0168d381789ec2843 148 PANTHER PTHR30345 1 142 1.3E-69 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS07185 a648ba6c4d2008bebb4936d7ebee49e6 207 PANTHER PTHR26402:SF474 15 154 1.6E-36 T 22-04-2016 RM25_RS07185 a648ba6c4d2008bebb4936d7ebee49e6 207 Pfam PF03861 ANTAR domain 146 197 2.7E-20 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 RM25_RS07185 a648ba6c4d2008bebb4936d7ebee49e6 207 PIRSF PIRSF036382 4 203 4.2E-67 T 22-04-2016 IPR008327 Signal transduction response regulator, antiterminator RM25_RS07185 a648ba6c4d2008bebb4936d7ebee49e6 207 Gene3D G3DSA:1.10.10.10 146 199 9.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07185 a648ba6c4d2008bebb4936d7ebee49e6 207 SMART SM01012 142 197 4.9E-24 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 RM25_RS07185 a648ba6c4d2008bebb4936d7ebee49e6 207 SUPERFAMILY SSF52172 13 196 2.99E-54 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS07185 a648ba6c4d2008bebb4936d7ebee49e6 207 Gene3D G3DSA:3.40.50.2300 9 129 7.2E-35 T 22-04-2016 RM25_RS07185 a648ba6c4d2008bebb4936d7ebee49e6 207 PANTHER PTHR26402 15 154 1.6E-36 T 22-04-2016 RM25_RS07185 a648ba6c4d2008bebb4936d7ebee49e6 207 Pfam PF00072 Response regulator receiver domain 17 126 1.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS07185 a648ba6c4d2008bebb4936d7ebee49e6 207 SMART SM00448 15 126 1.8E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS11065 19b4c08b1a3676d9732744baa00407e7 440 Gene3D G3DSA:3.40.190.10 42 226 5.4E-38 T 22-04-2016 RM25_RS11065 19b4c08b1a3676d9732744baa00407e7 440 PANTHER PTHR30061:SF7 1 422 9.4E-78 T 22-04-2016 RM25_RS11065 19b4c08b1a3676d9732744baa00407e7 440 Pfam PF13416 Bacterial extracellular solute-binding protein 61 376 3.0E-45 T 22-04-2016 RM25_RS11065 19b4c08b1a3676d9732744baa00407e7 440 SUPERFAMILY SSF53850 42 425 3.06E-69 T 22-04-2016 RM25_RS11065 19b4c08b1a3676d9732744baa00407e7 440 PANTHER PTHR30061 1 422 9.4E-78 T 22-04-2016 RM25_RS10610 4517b818d1e8812249dc0dd646516d87 160 Gene3D G3DSA:2.60.40.790 9 132 2.6E-30 T 22-04-2016 IPR008978 HSP20-like chaperone RM25_RS10610 4517b818d1e8812249dc0dd646516d87 160 PANTHER PTHR11527:SF42 11 139 4.1E-26 T 22-04-2016 RM25_RS10610 4517b818d1e8812249dc0dd646516d87 160 SUPERFAMILY SSF49764 9 132 6.49E-30 T 22-04-2016 IPR008978 HSP20-like chaperone RM25_RS10610 4517b818d1e8812249dc0dd646516d87 160 Pfam PF00011 Hsp20/alpha crystallin family 37 131 3.3E-22 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RM25_RS10610 4517b818d1e8812249dc0dd646516d87 160 PANTHER PTHR11527 11 139 4.1E-26 T 22-04-2016 IPR031107 Small heat shock protein HSP20 RM25_RS01165 0be2849d4017189b95b49894b2fdcb4f 305 Gene3D G3DSA:3.20.20.150 11 301 1.3E-54 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS01165 0be2849d4017189b95b49894b2fdcb4f 305 PANTHER PTHR12110 14 301 9.8E-39 T 22-04-2016 RM25_RS01165 0be2849d4017189b95b49894b2fdcb4f 305 Pfam PF01261 Xylose isomerase-like TIM barrel 38 225 9.1E-27 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS01165 0be2849d4017189b95b49894b2fdcb4f 305 PANTHER PTHR12110:SF3 14 301 9.8E-39 T 22-04-2016 RM25_RS01165 0be2849d4017189b95b49894b2fdcb4f 305 SUPERFAMILY SSF51658 11 300 1.13E-44 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS02735 f94ca68495f5db038f9f6a75be766462 327 SUPERFAMILY SSF161098 190 308 8.9E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS02735 f94ca68495f5db038f9f6a75be766462 327 SUPERFAMILY SSF161098 95 162 8.9E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS02735 f94ca68495f5db038f9f6a75be766462 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 325 1.6E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS02735 f94ca68495f5db038f9f6a75be766462 327 PANTHER PTHR30465:SF24 1 326 5.9E-68 T 22-04-2016 RM25_RS02735 f94ca68495f5db038f9f6a75be766462 327 PANTHER PTHR30465 1 326 5.9E-68 T 22-04-2016 RM25_RS02735 f94ca68495f5db038f9f6a75be766462 327 Gene3D G3DSA:1.10.3720.10 92 309 8.1E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS09985 9e783665967dd1a692bf640e32035b4d 651 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 137 630 9.8E-72 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 RM25_RS09985 9e783665967dd1a692bf640e32035b4d 651 SUPERFAMILY SSF51445 146 545 1.47E-109 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS09985 9e783665967dd1a692bf640e32035b4d 651 SUPERFAMILY SSF51445 572 639 1.47E-109 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS09985 9e783665967dd1a692bf640e32035b4d 651 PANTHER PTHR32438 135 633 1.8E-89 T 22-04-2016 RM25_RS09985 9e783665967dd1a692bf640e32035b4d 651 Gene3D G3DSA:3.20.20.80 144 635 4.5E-123 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS09985 9e783665967dd1a692bf640e32035b4d 651 PANTHER PTHR32438:SF5 135 633 1.8E-89 T 22-04-2016 RM25_RS09985 9e783665967dd1a692bf640e32035b4d 651 Pfam PF02446 4-alpha-glucanotransferase 152 626 3.6E-94 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 RM25_RS01400 15e75fa26241a093486e7abc556a3cb3 281 PRINTS PR00069 Aldo-keto reductase signature 41 65 2.0E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS01400 15e75fa26241a093486e7abc556a3cb3 281 PRINTS PR00069 Aldo-keto reductase signature 129 146 2.0E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS01400 15e75fa26241a093486e7abc556a3cb3 281 PRINTS PR00069 Aldo-keto reductase signature 97 115 2.0E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS01400 15e75fa26241a093486e7abc556a3cb3 281 PRINTS PR00069 Aldo-keto reductase signature 200 224 2.0E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS01400 15e75fa26241a093486e7abc556a3cb3 281 PRINTS PR00069 Aldo-keto reductase signature 163 192 2.0E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS01400 15e75fa26241a093486e7abc556a3cb3 281 Gene3D G3DSA:3.20.20.100 17 275 1.5E-94 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS01400 15e75fa26241a093486e7abc556a3cb3 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 129 146 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RM25_RS01400 15e75fa26241a093486e7abc556a3cb3 281 PANTHER PTHR11732 5 269 5.8E-123 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RM25_RS01400 15e75fa26241a093486e7abc556a3cb3 281 SUPERFAMILY SSF51430 16 269 7.07E-86 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS01400 15e75fa26241a093486e7abc556a3cb3 281 Pfam PF00248 Aldo/keto reductase family 22 265 5.8E-42 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS01400 15e75fa26241a093486e7abc556a3cb3 281 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 45 62 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 453 1.4E-151 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 Gene3D G3DSA:3.40.50.300 59 274 8.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 SMART SM00382 87 241 1.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 SUPERFAMILY SSF54211 300 456 2.81E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 SUPERFAMILY SSF54211 252 266 2.81E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 Pfam PF13481 AAA domain 75 219 1.9E-15 T 22-04-2016 RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 PRINTS PR01874 DNA repair protein radA signature 11 35 5.4E-78 T 22-04-2016 RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 PRINTS PR01874 DNA repair protein radA signature 79 107 5.4E-78 T 22-04-2016 RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 PRINTS PR01874 DNA repair protein radA signature 210 238 5.4E-78 T 22-04-2016 RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 PRINTS PR01874 DNA repair protein radA signature 245 271 5.4E-78 T 22-04-2016 RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 PRINTS PR01874 DNA repair protein radA signature 320 343 5.4E-78 T 22-04-2016 RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 PRINTS PR01874 DNA repair protein radA signature 121 138 5.4E-78 T 22-04-2016 RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 PRINTS PR01874 DNA repair protein radA signature 171 195 5.4E-78 T 22-04-2016 RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 Gene3D G3DSA:3.30.230.10 282 455 9.4E-28 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 PANTHER PTHR32472:SF10 4 453 4.9E-171 T 22-04-2016 RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 SUPERFAMILY SSF52540 69 289 2.4E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 PANTHER PTHR32472 4 453 4.9E-171 T 22-04-2016 RM25_RS09475 e896a601a95f10f9aeb5df07c417eba9 464 Pfam PF13541 Subunit ChlI of Mg-chelatase 364 427 3.4E-7 T 22-04-2016 RM25_RS01010 413e86d0e1c83445fc4fe45b46ff9d49 215 PANTHER PTHR10108:SF705 27 152 4.1E-13 T 22-04-2016 RM25_RS01010 413e86d0e1c83445fc4fe45b46ff9d49 215 SUPERFAMILY SSF53335 5 202 5.12E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS01010 413e86d0e1c83445fc4fe45b46ff9d49 215 Pfam PF13489 Methyltransferase domain 34 152 1.4E-13 T 22-04-2016 RM25_RS01010 413e86d0e1c83445fc4fe45b46ff9d49 215 Gene3D G3DSA:3.40.50.150 20 213 1.7E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS01010 413e86d0e1c83445fc4fe45b46ff9d49 215 PANTHER PTHR10108 27 152 4.1E-13 T 22-04-2016 RM25_RS08845 51a5497b66197980ad63c9c1a0de45a3 524 SUPERFAMILY SSF52096 252 523 2.96E-93 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS08845 51a5497b66197980ad63c9c1a0de45a3 524 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 214 8.7E-7 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RM25_RS08845 51a5497b66197980ad63c9c1a0de45a3 524 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 175 192 8.7E-7 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RM25_RS08845 51a5497b66197980ad63c9c1a0de45a3 524 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 139 157 8.7E-7 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RM25_RS08845 51a5497b66197980ad63c9c1a0de45a3 524 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 105 119 8.7E-7 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RM25_RS08845 51a5497b66197980ad63c9c1a0de45a3 524 PANTHER PTHR22855 10 524 5.1E-289 T 22-04-2016 RM25_RS08845 51a5497b66197980ad63c9c1a0de45a3 524 Gene3D G3DSA:3.90.226.10 11 263 1.4E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS08845 51a5497b66197980ad63c9c1a0de45a3 524 SUPERFAMILY SSF52096 11 259 3.11E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS08845 51a5497b66197980ad63c9c1a0de45a3 524 PANTHER PTHR22855:SF14 10 524 5.1E-289 T 22-04-2016 RM25_RS08845 51a5497b66197980ad63c9c1a0de45a3 524 Pfam PF01039 Carboxyl transferase domain 38 522 1.0E-189 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RM25_RS08845 51a5497b66197980ad63c9c1a0de45a3 524 Gene3D G3DSA:3.90.226.10 273 523 1.9E-98 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 Pfam PF00682 HMGL-like 28 310 1.7E-70 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 4 560 5.4E-248 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 35 51 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 SUPERFAMILY SSF89000 395 444 1.84E-13 T 22-04-2016 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 3 560 51.164 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 SMART SM00917 429 560 3.3E-28 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 240 253 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 SUPERFAMILY SSF110921 456 559 4.32E-35 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 Pfam PF08502 LeuA allosteric (dimerisation) domain 429 559 2.7E-30 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 PANTHER PTHR10277:SF28 4 343 5.6E-276 T 22-04-2016 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 PANTHER PTHR10277:SF28 364 560 5.6E-276 T 22-04-2016 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 SUPERFAMILY SSF51569 17 327 5.68E-94 T 22-04-2016 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 PANTHER PTHR10277 4 343 5.6E-276 T 22-04-2016 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 PANTHER PTHR10277 364 560 5.6E-276 T 22-04-2016 RM25_RS04170 ec40637c058379081ab98e017d7fdcd9 560 Gene3D G3DSA:3.20.20.70 6 400 8.3E-142 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS05750 22a7bbc7da826a929b7a678eb99cb19c 261 Gene3D G3DSA:3.40.50.300 13 248 6.8E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05750 22a7bbc7da826a929b7a678eb99cb19c 261 Pfam PF00005 ABC transporter 20 174 1.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS05750 22a7bbc7da826a929b7a678eb99cb19c 261 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS05750 22a7bbc7da826a929b7a678eb99cb19c 261 PANTHER PTHR24220:SF336 1 252 1.1E-101 T 22-04-2016 RM25_RS05750 22a7bbc7da826a929b7a678eb99cb19c 261 PANTHER PTHR24220 1 252 1.1E-101 T 22-04-2016 RM25_RS05750 22a7bbc7da826a929b7a678eb99cb19c 261 SMART SM00382 28 232 1.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS05750 22a7bbc7da826a929b7a678eb99cb19c 261 SUPERFAMILY SSF52540 12 246 4.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10050 da7f55e1e310ac1adbb41d36586bcc5d 249 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 57 225 1.4E-38 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RM25_RS10050 da7f55e1e310ac1adbb41d36586bcc5d 249 PANTHER PTHR23293:SF5 26 248 2.0E-75 T 22-04-2016 RM25_RS10050 da7f55e1e310ac1adbb41d36586bcc5d 249 PIRSF PIRSF000857 2 249 5.1E-87 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 RM25_RS10050 da7f55e1e310ac1adbb41d36586bcc5d 249 Gene3D G3DSA:3.40.50.620 26 221 2.6E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS10050 da7f55e1e310ac1adbb41d36586bcc5d 249 PANTHER PTHR23293 26 248 2.0E-75 T 22-04-2016 RM25_RS10050 da7f55e1e310ac1adbb41d36586bcc5d 249 SUPERFAMILY SSF52402 31 211 2.72E-39 T 22-04-2016 RM25_RS10875 751e90ea0a8527b0293003d961f4d1f7 540 PANTHER PTHR10342 58 510 8.4E-130 T 22-04-2016 RM25_RS10875 751e90ea0a8527b0293003d961f4d1f7 540 Gene3D G3DSA:3.30.1120.10 397 485 3.0E-15 T 22-04-2016 RM25_RS10875 751e90ea0a8527b0293003d961f4d1f7 540 ProSitePatterns PS00149 Sulfatases signature 2. 155 165 - T 22-04-2016 IPR024607 Sulfatase, conserved site RM25_RS10875 751e90ea0a8527b0293003d961f4d1f7 540 PANTHER PTHR10342:SF199 58 510 8.4E-130 T 22-04-2016 RM25_RS10875 751e90ea0a8527b0293003d961f4d1f7 540 SUPERFAMILY SSF53649 58 483 2.91E-116 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RM25_RS10875 751e90ea0a8527b0293003d961f4d1f7 540 Gene3D G3DSA:3.40.720.10 56 396 2.1E-103 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RM25_RS10875 751e90ea0a8527b0293003d961f4d1f7 540 Pfam PF00884 Sulfatase 59 383 5.0E-68 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RM25_RS11850 5bbabe3ccd98e1ad067e4713fdc8934f 123 PANTHER PTHR36111 1 123 1.9E-30 T 22-04-2016 RM25_RS11850 5bbabe3ccd98e1ad067e4713fdc8934f 123 PANTHER PTHR36111:SF2 1 123 1.9E-30 T 22-04-2016 RM25_RS11850 5bbabe3ccd98e1ad067e4713fdc8934f 123 Pfam PF04474 Protein of unknown function (DUF554) 1 115 7.9E-34 T 22-04-2016 IPR007563 Protein of unknown function DUF554 RM25_RS00530 36aff0480d9780814f80b0423dc1eab6 303 PANTHER PTHR18966:SF191 46 285 1.2E-28 T 22-04-2016 RM25_RS00530 36aff0480d9780814f80b0423dc1eab6 303 Gene3D G3DSA:3.40.190.10 166 245 2.4E-13 T 22-04-2016 RM25_RS00530 36aff0480d9780814f80b0423dc1eab6 303 SUPERFAMILY SSF53850 9 286 6.52E-53 T 22-04-2016 RM25_RS00530 36aff0480d9780814f80b0423dc1eab6 303 PANTHER PTHR18966 46 285 1.2E-28 T 22-04-2016 RM25_RS00530 36aff0480d9780814f80b0423dc1eab6 303 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 62 287 5.3E-50 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RM25_RS00530 36aff0480d9780814f80b0423dc1eab6 303 Gene3D G3DSA:3.40.190.10 18 165 1.6E-31 T 22-04-2016 RM25_RS00530 36aff0480d9780814f80b0423dc1eab6 303 SMART SM00062 61 289 6.8E-38 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RM25_RS08890 9e2b66dca05a461215dead53fa986963 361 Gene3D G3DSA:3.20.20.210 20 354 2.9E-130 T 22-04-2016 RM25_RS08890 9e2b66dca05a461215dead53fa986963 361 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 19 355 40.971 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RM25_RS08890 9e2b66dca05a461215dead53fa986963 361 SUPERFAMILY SSF51726 22 354 8.02E-92 T 22-04-2016 RM25_RS08890 9e2b66dca05a461215dead53fa986963 361 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 20 353 7.4E-113 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RM25_RS08890 9e2b66dca05a461215dead53fa986963 361 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 22 353 8.9E-105 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RM25_RS08890 9e2b66dca05a461215dead53fa986963 361 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 152 168 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RM25_RS08890 9e2b66dca05a461215dead53fa986963 361 PANTHER PTHR21091 26 353 6.8E-100 T 22-04-2016 RM25_RS08890 9e2b66dca05a461215dead53fa986963 361 PANTHER PTHR21091:SF2 26 353 6.8E-100 T 22-04-2016 RM25_RS08890 9e2b66dca05a461215dead53fa986963 361 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 35 44 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RM25_RS08865 25d8d76d7de65b16032502c1e36bb227 464 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 430 1.8E-97 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RM25_RS08865 25d8d76d7de65b16032502c1e36bb227 464 PANTHER PTHR23501 22 460 3.1E-139 T 22-04-2016 RM25_RS08865 25d8d76d7de65b16032502c1e36bb227 464 Pfam PF07690 Major Facilitator Superfamily 24 418 8.8E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS08865 25d8d76d7de65b16032502c1e36bb227 464 Gene3D G3DSA:1.20.1250.20 273 463 1.2E-21 T 22-04-2016 RM25_RS08865 25d8d76d7de65b16032502c1e36bb227 464 Gene3D G3DSA:1.20.1250.20 17 197 1.6E-22 T 22-04-2016 RM25_RS08865 25d8d76d7de65b16032502c1e36bb227 464 PANTHER PTHR23501:SF66 22 460 3.1E-139 T 22-04-2016 RM25_RS08865 25d8d76d7de65b16032502c1e36bb227 464 SUPERFAMILY SSF103473 257 462 9.55E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS08865 25d8d76d7de65b16032502c1e36bb227 464 SUPERFAMILY SSF103473 16 201 9.55E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 Pfam PF07497 Rho termination factor, RNA-binding domain 265 338 4.3E-26 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 PANTHER PTHR15184:SF34 193 626 1.4E-160 T 22-04-2016 RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 Gene3D G3DSA:2.40.50.140 1 37 3.4E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 Gene3D G3DSA:2.40.50.140 259 338 3.4E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 370 573 5.0E-19 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 SMART SM00357 265 331 1.8E-5 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 Pfam PF07498 Rho termination factor, N-terminal domain 1 30 7.6E-9 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 PANTHER PTHR15184 193 626 1.4E-160 T 22-04-2016 RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 Hamap MF_01884 Transcription termination factor Rho [rho]. 250 629 189.376 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 Gene3D G3DSA:3.40.50.300 344 623 3.7E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 SMART SM00382 380 565 9.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 SMART SM00959 1 39 1.2E-4 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 SUPERFAMILY SSF50249 264 338 7.88E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 TIGRFAM TIGR00767 rho: transcription termination factor Rho 1 627 9.4E-188 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RM25_RS05635 92821da7621b8ec830ffa2e7ef39f800 634 SUPERFAMILY SSF52540 303 581 3.11E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06225 4649048c29468fd598f66cfa0d5e1d79 90 PANTHER PTHR36539:SF1 1 86 6.5E-31 T 22-04-2016 RM25_RS06225 4649048c29468fd598f66cfa0d5e1d79 90 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 83 8.0E-13 T 22-04-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RM25_RS06225 4649048c29468fd598f66cfa0d5e1d79 90 Gene3D G3DSA:2.40.50.220 1 88 1.5E-33 T 22-04-2016 IPR023414 Ethanolamine utilization protein-like domain RM25_RS06225 4649048c29468fd598f66cfa0d5e1d79 90 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 1.5E-31 T 22-04-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RM25_RS06225 4649048c29468fd598f66cfa0d5e1d79 90 SUPERFAMILY SSF159133 1 88 5.76E-30 T 22-04-2016 IPR023414 Ethanolamine utilization protein-like domain RM25_RS06225 4649048c29468fd598f66cfa0d5e1d79 90 PANTHER PTHR36539 1 86 6.5E-31 T 22-04-2016 RM25_RS05365 65db9bcbfc41c7de86a3d9ac26353261 387 Gene3D G3DSA:3.40.50.2300 157 290 7.6E-8 T 22-04-2016 RM25_RS05365 65db9bcbfc41c7de86a3d9ac26353261 387 Gene3D G3DSA:3.40.50.2300 298 366 9.7E-57 T 22-04-2016 RM25_RS05365 65db9bcbfc41c7de86a3d9ac26353261 387 Gene3D G3DSA:3.40.50.2300 30 156 9.7E-57 T 22-04-2016 RM25_RS05365 65db9bcbfc41c7de86a3d9ac26353261 387 SUPERFAMILY SSF53822 32 378 4.5E-96 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RM25_RS05365 65db9bcbfc41c7de86a3d9ac26353261 387 PANTHER PTHR30483 2 378 4.6E-93 T 22-04-2016 RM25_RS05365 65db9bcbfc41c7de86a3d9ac26353261 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 55 71 5.5E-12 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RM25_RS05365 65db9bcbfc41c7de86a3d9ac26353261 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 74 92 5.5E-12 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RM25_RS05365 65db9bcbfc41c7de86a3d9ac26353261 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 33 49 5.5E-12 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RM25_RS05365 65db9bcbfc41c7de86a3d9ac26353261 387 Pfam PF13458 Periplasmic binding protein 32 376 5.8E-71 T 22-04-2016 IPR028081 Leucine-binding protein domain RM25_RS05365 65db9bcbfc41c7de86a3d9ac26353261 387 PANTHER PTHR30483:SF6 2 378 4.6E-93 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RM25_RS10715 d7cf17639deeca36b44161e4ded0c87a 254 SMART SM00244 20 177 1.6E-54 T 22-04-2016 IPR001107 Band 7 domain RM25_RS10715 d7cf17639deeca36b44161e4ded0c87a 254 PRINTS PR00721 Stomatin signature 172 193 8.2E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RM25_RS10715 d7cf17639deeca36b44161e4ded0c87a 254 PRINTS PR00721 Stomatin signature 197 220 8.2E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RM25_RS10715 d7cf17639deeca36b44161e4ded0c87a 254 PRINTS PR00721 Stomatin signature 109 126 8.2E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RM25_RS10715 d7cf17639deeca36b44161e4ded0c87a 254 PRINTS PR00721 Stomatin signature 153 171 8.2E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RM25_RS10715 d7cf17639deeca36b44161e4ded0c87a 254 PRINTS PR00721 Stomatin signature 74 95 8.2E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RM25_RS10715 d7cf17639deeca36b44161e4ded0c87a 254 PRINTS PR00721 Stomatin signature 27 49 8.2E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RM25_RS10715 d7cf17639deeca36b44161e4ded0c87a 254 PRINTS PR00721 Stomatin signature 129 152 8.2E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RM25_RS10715 d7cf17639deeca36b44161e4ded0c87a 254 Pfam PF01145 SPFH domain / Band 7 family 24 193 1.1E-34 T 22-04-2016 IPR001107 Band 7 domain RM25_RS10715 d7cf17639deeca36b44161e4ded0c87a 254 PANTHER PTHR10264 1 242 4.3E-97 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RM25_RS10715 d7cf17639deeca36b44161e4ded0c87a 254 SUPERFAMILY SSF117892 51 184 6.54E-40 T 22-04-2016 IPR001107 Band 7 domain RM25_RS04150 f76e287897b5c5db1cf70700efbe5e45 434 PANTHER PTHR22777:SF17 1 432 6.3E-144 T 22-04-2016 RM25_RS04150 f76e287897b5c5db1cf70700efbe5e45 434 Gene3D G3DSA:3.10.580.10 189 333 1.3E-18 T 22-04-2016 RM25_RS04150 f76e287897b5c5db1cf70700efbe5e45 434 SMART SM01091 341 421 1.9E-24 T 22-04-2016 IPR005170 Transporter-associated domain RM25_RS04150 f76e287897b5c5db1cf70700efbe5e45 434 Pfam PF01595 Domain of unknown function DUF21 10 188 3.4E-26 T 22-04-2016 IPR002550 Domain of unknown function DUF21 RM25_RS04150 f76e287897b5c5db1cf70700efbe5e45 434 SUPERFAMILY SSF56176 340 429 1.83E-18 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RM25_RS04150 f76e287897b5c5db1cf70700efbe5e45 434 SUPERFAMILY SSF54631 198 345 2.53E-32 T 22-04-2016 RM25_RS04150 f76e287897b5c5db1cf70700efbe5e45 434 Pfam PF03471 Transporter associated domain 342 420 4.1E-17 T 22-04-2016 IPR005170 Transporter-associated domain RM25_RS04150 f76e287897b5c5db1cf70700efbe5e45 434 PANTHER PTHR22777 1 432 6.3E-144 T 22-04-2016 RM25_RS04150 f76e287897b5c5db1cf70700efbe5e45 434 Pfam PF00571 CBS domain 272 326 0.0041 T 22-04-2016 IPR000644 CBS domain RM25_RS04150 f76e287897b5c5db1cf70700efbe5e45 434 Pfam PF00571 CBS domain 203 260 1.3E-4 T 22-04-2016 IPR000644 CBS domain RM25_RS04150 f76e287897b5c5db1cf70700efbe5e45 434 Gene3D G3DSA:3.30.465.10 334 419 6.4E-25 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RM25_RS09970 4fac58447ecc64e55ce80f62aae2bdd8 414 Pfam PF01872 RibD C-terminal domain 224 405 1.4E-43 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 RM25_RS09970 4fac58447ecc64e55ce80f62aae2bdd8 414 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 74 170 3.8E-16 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RM25_RS09970 4fac58447ecc64e55ce80f62aae2bdd8 414 SUPERFAMILY SSF53927 74 210 2.01E-36 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RM25_RS09970 4fac58447ecc64e55ce80f62aae2bdd8 414 SUPERFAMILY SSF53597 223 408 3.4E-48 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RM25_RS09970 4fac58447ecc64e55ce80f62aae2bdd8 414 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 77 406 4.6E-84 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 RM25_RS09970 4fac58447ecc64e55ce80f62aae2bdd8 414 Gene3D G3DSA:3.40.430.10 199 411 1.8E-56 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RM25_RS09970 4fac58447ecc64e55ce80f62aae2bdd8 414 PANTHER PTHR11079:SF10 75 285 9.1E-34 T 22-04-2016 RM25_RS09970 4fac58447ecc64e55ce80f62aae2bdd8 414 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 118 159 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RM25_RS09970 4fac58447ecc64e55ce80f62aae2bdd8 414 PANTHER PTHR11079 75 285 9.1E-34 T 22-04-2016 RM25_RS09970 4fac58447ecc64e55ce80f62aae2bdd8 414 Gene3D G3DSA:3.40.140.10 73 198 3.3E-27 T 22-04-2016 RM25_RS03585 4f8e56527cc1c03a359f7c7dee375a2c 638 Gene3D G3DSA:3.20.20.240 64 498 9.2E-119 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 RM25_RS03585 4f8e56527cc1c03a359f7c7dee375a2c 638 TIGRFAM TIGR00642 mmCoA_mut_beta: methylmalonyl-CoA mutase, small subunit 21 637 0.0 T 22-04-2016 IPR004608 Methylmalonyl-CoA mutase, beta chain GO:0004494|GO:0019652|GO:0031419 KEGG: 00280+5.4.99.2|KEGG: 00630+5.4.99.2|KEGG: 00640+5.4.99.2|KEGG: 00720+5.4.99.2|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|UniPathway: UPA00945 RM25_RS03585 4f8e56527cc1c03a359f7c7dee375a2c 638 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 377 402 - T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 RM25_RS03585 4f8e56527cc1c03a359f7c7dee375a2c 638 SUPERFAMILY SSF51703 22 535 3.14E-133 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 RM25_RS03585 4f8e56527cc1c03a359f7c7dee375a2c 638 Gene3D G3DSA:3.40.50.280 504 637 1.8E-41 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RM25_RS03585 4f8e56527cc1c03a359f7c7dee375a2c 638 SUPERFAMILY SSF52242 479 636 2.28E-32 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RM25_RS03585 4f8e56527cc1c03a359f7c7dee375a2c 638 PANTHER PTHR23408 228 467 1.0E-63 T 22-04-2016 RM25_RS03585 4f8e56527cc1c03a359f7c7dee375a2c 638 Pfam PF01642 Methylmalonyl-CoA mutase 66 519 8.2E-101 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 RM25_RS03585 4f8e56527cc1c03a359f7c7dee375a2c 638 PANTHER PTHR23408:SF13 228 467 1.0E-63 T 22-04-2016 RM25_RS03585 4f8e56527cc1c03a359f7c7dee375a2c 638 Gene3D G3DSA:1.10.196.20 20 62 1.3E-25 T 22-04-2016 IPR024067 Methylmalonyl-CoA mutase small subunit, N-terminal KEGG: 00280+5.4.99.2|KEGG: 00630+5.4.99.2|KEGG: 00640+5.4.99.2|KEGG: 00720+5.4.99.2|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|UniPathway: UPA00945 RM25_RS03370 ad985d8ee6fd30014ceac763d7146af9 192 Pfam PF01047 MarR family 60 101 1.4E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS03370 ad985d8ee6fd30014ceac763d7146af9 192 SUPERFAMILY SSF46785 26 109 1.32E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03370 ad985d8ee6fd30014ceac763d7146af9 192 Gene3D G3DSA:1.10.10.10 26 102 3.5E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04990 3de7a091fd4b6c5c3235db18dcd4db9c 378 Gene3D G3DSA:3.40.640.10 79 273 3.7E-56 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS04990 3de7a091fd4b6c5c3235db18dcd4db9c 378 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 242 251 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RM25_RS04990 3de7a091fd4b6c5c3235db18dcd4db9c 378 PANTHER PTHR11751 30 375 6.2E-85 T 22-04-2016 RM25_RS04990 3de7a091fd4b6c5c3235db18dcd4db9c 378 Pfam PF00155 Aminotransferase class I and II 51 371 6.5E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RM25_RS04990 3de7a091fd4b6c5c3235db18dcd4db9c 378 Gene3D G3DSA:3.90.1150.10 274 375 3.7E-26 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS04990 3de7a091fd4b6c5c3235db18dcd4db9c 378 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 30 377 50.695 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RM25_RS04990 3de7a091fd4b6c5c3235db18dcd4db9c 378 SUPERFAMILY SSF53383 49 376 3.19E-76 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS04990 3de7a091fd4b6c5c3235db18dcd4db9c 378 PANTHER PTHR11751:SF398 30 375 6.2E-85 T 22-04-2016 RM25_RS04990 3de7a091fd4b6c5c3235db18dcd4db9c 378 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 40 375 1.9E-90 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 Pfam PF01568 Molydopterin dinucleotide binding domain 717 782 1.6E-6 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 107 144 6.4E-15 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 Gene3D G3DSA:3.30.70.20 221 247 7.0E-5 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 240 289 5.6E-6 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 Gene3D G3DSA:3.40.50.740 295 366 3.2E-35 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 Gene3D G3DSA:3.40.50.740 485 683 3.2E-35 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 46 63 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 Gene3D G3DSA:2.40.40.20 720 784 1.9E-7 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 20 654 3.1E-155 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 168 178 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 SMART SM00926 238 292 3.9E-4 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 Gene3D G3DSA:3.10.20.30 8 68 1.6E-5 T 22-04-2016 IPR012675 Beta-grasp domain RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 SUPERFAMILY SSF50692 698 781 2.49E-9 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 Gene3D G3DSA:2.20.25.90 248 288 6.4E-8 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 SUPERFAMILY SSF53706 238 524 8.11E-70 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 SUPERFAMILY SSF53706 562 672 8.11E-70 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 SUPERFAMILY SSF54862 98 232 9.63E-30 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 Gene3D G3DSA:3.30.70.20 154 220 4.3E-4 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 Pfam PF00384 Molybdopterin oxidoreductase 295 436 9.6E-16 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 PANTHER PTHR11615:SF166 382 442 1.0E-208 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 PANTHER PTHR11615:SF166 497 793 1.0E-208 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 PANTHER PTHR11615:SF166 18 326 1.0E-208 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 SUPERFAMILY SSF54292 17 94 4.44E-16 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 SMART SM00929 105 145 1.9E-17 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 16 95 3.6E-15 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 PANTHER PTHR11615 382 442 1.0E-208 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 PANTHER PTHR11615 497 793 1.0E-208 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 PANTHER PTHR11615 18 326 1.0E-208 T 22-04-2016 RM25_RS02365 90ffc6080075427a8bdd46f0eb8eba5b 803 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 120 132 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 SUPERFAMILY SSF88697 294 384 2.15E-20 T 22-04-2016 IPR015947 PUA-like domain RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 Hamap MF_00456 Glutamate 5-kinase [proB]. 27 275 34.622 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 PANTHER PTHR11063:SF12 26 387 2.8E-106 T 22-04-2016 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 Gene3D G3DSA:2.30.130.10 292 382 1.9E-22 T 22-04-2016 IPR015947 PUA-like domain RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 PIRSF PIRSF000729 22 386 1.8E-121 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 Pfam PF01472 PUA domain 298 363 3.2E-18 T 22-04-2016 IPR002478 PUA domain GO:0003723 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 SMART SM00359 294 373 5.9E-16 T 22-04-2016 IPR002478 PUA domain GO:0003723 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 TIGRFAM TIGR01027 proB: glutamate 5-kinase 27 383 6.2E-123 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 Pfam PF00696 Amino acid kinase family 28 253 1.4E-40 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 SUPERFAMILY SSF53633 27 272 5.11E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 PANTHER PTHR11063 26 387 2.8E-106 T 22-04-2016 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 PRINTS PR00474 Glutamate 5-kinase family signature 64 78 4.5E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 PRINTS PR00474 Glutamate 5-kinase family signature 170 197 4.5E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 PRINTS PR00474 Glutamate 5-kinase family signature 138 159 4.5E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 PRINTS PR00474 Glutamate 5-kinase family signature 98 126 4.5E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 PRINTS PR00474 Glutamate 5-kinase family signature 229 249 4.5E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 Gene3D G3DSA:3.40.1160.10 27 273 9.5E-55 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RM25_RS03970 2a89ec912de41501375e5c38bb87c83e 390 ProSitePatterns PS00902 Glutamate 5-kinase signature. 227 244 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RM25_RS03755 09292422ceca612051b0abb930ff2cde 456 Gene3D G3DSA:3.30.428.10 226 405 1.4E-22 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RM25_RS03755 09292422ceca612051b0abb930ff2cde 456 Pfam PF16268 Domain of unknown function (DUF4921) 13 438 2.1E-210 T 22-04-2016 IPR032576 Domain of unknown function DUF4921 RM25_RS03755 09292422ceca612051b0abb930ff2cde 456 SUPERFAMILY SSF54197 20 133 2.27E-21 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RM25_RS03755 09292422ceca612051b0abb930ff2cde 456 SUPERFAMILY SSF54197 181 262 2.27E-21 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RM25_RS07950 e7892df1e659a739c4d67915ac3cce03 681 SUPERFAMILY SSF52833 2 126 1.37E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS07950 e7892df1e659a739c4d67915ac3cce03 681 PANTHER PTHR12145:SF11 2 681 1.1E-190 T 22-04-2016 RM25_RS07950 e7892df1e659a739c4d67915ac3cce03 681 Gene3D G3DSA:3.40.30.10 21 147 8.6E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS07950 e7892df1e659a739c4d67915ac3cce03 681 Gene3D G3DSA:1.50.10.10 426 568 5.5E-4 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RM25_RS07950 e7892df1e659a739c4d67915ac3cce03 681 SUPERFAMILY SSF48208 193 525 2.67E-39 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RM25_RS07950 e7892df1e659a739c4d67915ac3cce03 681 PANTHER PTHR12145 2 681 1.1E-190 T 22-04-2016 RM25_RS07950 e7892df1e659a739c4d67915ac3cce03 681 Pfam PF03190 Protein of unknown function, DUF255 3 163 6.3E-69 T 22-04-2016 IPR004879 Domain of unknown function DUF255 RM25_RS07950 e7892df1e659a739c4d67915ac3cce03 681 PIRSF PIRSF006402 1 681 4.5E-172 T 22-04-2016 IPR024705 Spermatogenesis-associated protein 20 RM25_RS02310 9f861bc28ba564714da0c9a583b4d4c4 215 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 9 24 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RM25_RS02310 9f861bc28ba564714da0c9a583b4d4c4 215 SUPERFAMILY SSF53335 1 212 1.17E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS02310 9f861bc28ba564714da0c9a583b4d4c4 215 PANTHER PTHR10108 1 213 1.8E-72 T 22-04-2016 RM25_RS02310 9f861bc28ba564714da0c9a583b4d4c4 215 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 122 136 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RM25_RS02310 9f861bc28ba564714da0c9a583b4d4c4 215 PANTHER PTHR10108:SF24 1 213 1.8E-72 T 22-04-2016 RM25_RS02310 9f861bc28ba564714da0c9a583b4d4c4 215 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 214 32.267 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RM25_RS02310 9f861bc28ba564714da0c9a583b4d4c4 215 Pfam PF01209 ubiE/COQ5 methyltransferase family 1 213 1.3E-58 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RM25_RS02310 9f861bc28ba564714da0c9a583b4d4c4 215 Gene3D G3DSA:3.40.50.150 1 212 4.8E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS02310 9f861bc28ba564714da0c9a583b4d4c4 215 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 1 212 1.4E-70 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RM25_RS07250 a951ee64feb6db8a520fbc8cea2e96bc 366 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 364 30.991 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS07250 a951ee64feb6db8a520fbc8cea2e96bc 366 PANTHER PTHR21015:SF22 1 366 2.6E-89 T 22-04-2016 RM25_RS07250 a951ee64feb6db8a520fbc8cea2e96bc 366 Gene3D G3DSA:3.40.50.2000 1 191 1.0E-58 T 22-04-2016 RM25_RS07250 a951ee64feb6db8a520fbc8cea2e96bc 366 Gene3D G3DSA:3.40.50.2000 192 363 5.1E-21 T 22-04-2016 RM25_RS07250 a951ee64feb6db8a520fbc8cea2e96bc 366 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 359 1.4E-80 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS07250 a951ee64feb6db8a520fbc8cea2e96bc 366 PANTHER PTHR21015 1 366 2.6E-89 T 22-04-2016 RM25_RS07250 a951ee64feb6db8a520fbc8cea2e96bc 366 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 143 4.3E-35 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS07250 a951ee64feb6db8a520fbc8cea2e96bc 366 SUPERFAMILY SSF53756 3 363 3.37E-93 T 22-04-2016 RM25_RS07250 a951ee64feb6db8a520fbc8cea2e96bc 366 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 192 345 4.2E-32 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS02730 d24b0e463e3aa5ec8fa6e7900e9b151b 328 Gene3D G3DSA:1.10.3720.10 47 313 8.2E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS02730 d24b0e463e3aa5ec8fa6e7900e9b151b 328 SUPERFAMILY SSF161098 118 303 5.89E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS02730 d24b0e463e3aa5ec8fa6e7900e9b151b 328 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 39 76 9.3E-10 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RM25_RS02730 d24b0e463e3aa5ec8fa6e7900e9b151b 328 PANTHER PTHR30465 26 324 2.7E-59 T 22-04-2016 RM25_RS02730 d24b0e463e3aa5ec8fa6e7900e9b151b 328 PANTHER PTHR30465:SF2 26 324 2.7E-59 T 22-04-2016 RM25_RS02730 d24b0e463e3aa5ec8fa6e7900e9b151b 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 142 320 4.4E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS04880 ca73c40b0de4bcc2f43401ff33a35981 266 Pfam PF02585 GlcNAc-PI de-N-acetylase 6 145 9.7E-25 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RM25_RS04880 ca73c40b0de4bcc2f43401ff33a35981 266 SUPERFAMILY SSF102588 3 233 7.85E-44 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain RM25_RS04880 ca73c40b0de4bcc2f43401ff33a35981 266 PANTHER PTHR12993:SF13 2 165 7.7E-33 T 22-04-2016 RM25_RS04880 ca73c40b0de4bcc2f43401ff33a35981 266 PANTHER PTHR12993 2 165 7.7E-33 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RM25_RS04880 ca73c40b0de4bcc2f43401ff33a35981 266 Gene3D G3DSA:3.40.50.10320 4 250 2.0E-51 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain RM25_RS05130 fa2b8fe9fe35dda2ce3cde09585cbe2a 208 Gene3D G3DSA:1.10.940.10 34 162 1.3E-32 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RM25_RS05130 fa2b8fe9fe35dda2ce3cde09585cbe2a 208 Pfam PF01029 NusB family 40 162 3.0E-24 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RM25_RS05130 fa2b8fe9fe35dda2ce3cde09585cbe2a 208 PANTHER PTHR11078 36 178 3.9E-30 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 RM25_RS05130 fa2b8fe9fe35dda2ce3cde09585cbe2a 208 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 36 166 18.859 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 RM25_RS05130 fa2b8fe9fe35dda2ce3cde09585cbe2a 208 SUPERFAMILY SSF48013 38 161 1.96E-27 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RM25_RS05130 fa2b8fe9fe35dda2ce3cde09585cbe2a 208 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 38 164 4.5E-31 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 RM25_RS06360 67a6a22fb027a839b3d7d79fb20ade4a 310 PIRSF PIRSF016838 1 307 1.1E-85 T 22-04-2016 IPR028349 Protein PafC RM25_RS06360 67a6a22fb027a839b3d7d79fb20ade4a 310 Gene3D G3DSA:1.10.10.60 7 30 8.1E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS06360 67a6a22fb027a839b3d7d79fb20ade4a 310 Pfam PF13280 WYL domain 137 298 1.0E-23 T 22-04-2016 IPR026881 WYL domain RM25_RS06360 67a6a22fb027a839b3d7d79fb20ade4a 310 PANTHER PTHR34580 1 305 8.8E-42 T 22-04-2016 RM25_RS06360 67a6a22fb027a839b3d7d79fb20ade4a 310 PANTHER PTHR34580:SF2 1 305 8.8E-42 T 22-04-2016 RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 Gene3D G3DSA:3.40.50.970 14 186 2.5E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 15 178 2.1E-53 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 436 455 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 SUPERFAMILY SSF52467 196 366 1.18E-56 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 PANTHER PTHR18968 1 585 1.1E-296 T 22-04-2016 RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 205 339 2.5E-45 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 PANTHER PTHR18968:SF116 1 585 1.1E-296 T 22-04-2016 RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 SUPERFAMILY SSF52518 376 581 1.73E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 Gene3D G3DSA:3.40.50.970 370 576 7.6E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 399 549 1.3E-46 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 SUPERFAMILY SSF52518 14 193 1.35E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 15 571 1.3E-228 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS06310 f6d049c72fc625079f18b5f0b0f4bd80 586 Gene3D G3DSA:3.40.50.1220 199 365 6.0E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS03085 1bab6afaa9ce891f48b040eef0192bff 295 Pfam PF09234 Domain of unknown function (DUF1963) 37 294 2.2E-45 T 22-04-2016 IPR015315 Protein of unknown function DUF1963 RM25_RS03085 1bab6afaa9ce891f48b040eef0192bff 295 SUPERFAMILY SSF103032 248 294 3.79E-43 T 22-04-2016 IPR015315 Protein of unknown function DUF1963 RM25_RS03085 1bab6afaa9ce891f48b040eef0192bff 295 SUPERFAMILY SSF103032 6 221 3.79E-43 T 22-04-2016 IPR015315 Protein of unknown function DUF1963 RM25_RS03085 1bab6afaa9ce891f48b040eef0192bff 295 PANTHER PTHR36436:SF3 240 295 1.4E-41 T 22-04-2016 RM25_RS03085 1bab6afaa9ce891f48b040eef0192bff 295 PANTHER PTHR36436:SF3 13 218 1.4E-41 T 22-04-2016 RM25_RS03085 1bab6afaa9ce891f48b040eef0192bff 295 PANTHER PTHR36436 240 295 1.4E-41 T 22-04-2016 RM25_RS03085 1bab6afaa9ce891f48b040eef0192bff 295 PANTHER PTHR36436 13 218 1.4E-41 T 22-04-2016 RM25_RS03085 1bab6afaa9ce891f48b040eef0192bff 295 Gene3D G3DSA:2.30.320.10 5 295 1.4E-45 T 22-04-2016 IPR015315 Protein of unknown function DUF1963 RM25_RS10155 23d0eb441d0816b41fd2101418fe7562 386 Gene3D G3DSA:1.10.10.10 36 107 1.2E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10155 23d0eb441d0816b41fd2101418fe7562 386 SUPERFAMILY SSF54285 296 384 5.79E-11 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RM25_RS10155 23d0eb441d0816b41fd2101418fe7562 386 Pfam PF02597 ThiS family 317 386 3.2E-10 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RM25_RS10155 23d0eb441d0816b41fd2101418fe7562 386 Gene3D G3DSA:3.10.20.30 297 386 1.2E-16 T 22-04-2016 IPR012675 Beta-grasp domain RM25_RS10155 23d0eb441d0816b41fd2101418fe7562 386 Pfam PF12802 MarR family 49 107 1.8E-6 T 22-04-2016 RM25_RS10155 23d0eb441d0816b41fd2101418fe7562 386 SUPERFAMILY SSF46785 64 166 1.51E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS00930 df3a9496202a4d53ebb15d44751ab1ae 474 PANTHER PTHR11699 4 470 1.6E-238 T 22-04-2016 RM25_RS00930 df3a9496202a4d53ebb15d44751ab1ae 474 Pfam PF00171 Aldehyde dehydrogenase family 13 469 1.1E-152 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RM25_RS00930 df3a9496202a4d53ebb15d44751ab1ae 474 SUPERFAMILY SSF53720 3 471 2.62E-151 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RM25_RS00930 df3a9496202a4d53ebb15d44751ab1ae 474 Gene3D G3DSA:3.40.605.10 5 260 1.1E-83 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RM25_RS00930 df3a9496202a4d53ebb15d44751ab1ae 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RM25_RS00930 df3a9496202a4d53ebb15d44751ab1ae 474 Gene3D G3DSA:3.40.309.10 261 449 2.9E-64 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RM25_RS00930 df3a9496202a4d53ebb15d44751ab1ae 474 PANTHER PTHR11699:SF109 4 470 1.6E-238 T 22-04-2016 IPR015657 Aminobutyraldehyde dehydrogenase KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 RM25_RS01270 403a6f8de1c8ad8eb4851b89e8e53063 413 Pfam PF07690 Major Facilitator Superfamily 2 312 2.4E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS01270 403a6f8de1c8ad8eb4851b89e8e53063 413 Gene3D G3DSA:1.20.1250.20 1 159 1.6E-23 T 22-04-2016 RM25_RS01270 403a6f8de1c8ad8eb4851b89e8e53063 413 PANTHER PTHR11662 1 411 5.5E-132 T 22-04-2016 RM25_RS01270 403a6f8de1c8ad8eb4851b89e8e53063 413 PANTHER PTHR11662:SF244 1 411 5.5E-132 T 22-04-2016 RM25_RS01270 403a6f8de1c8ad8eb4851b89e8e53063 413 SUPERFAMILY SSF103473 2 382 1.15E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS01270 403a6f8de1c8ad8eb4851b89e8e53063 413 PIRSF PIRSF002808 1 398 1.1E-88 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RM25_RS01270 403a6f8de1c8ad8eb4851b89e8e53063 413 Gene3D G3DSA:1.20.1250.20 185 387 3.2E-27 T 22-04-2016 RM25_RS04905 a5a9ab8bc44d82b1ad319723e94fcb8d 199 SMART SM00855 1 151 4.6E-14 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS04905 a5a9ab8bc44d82b1ad319723e94fcb8d 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 1 191 3.6E-52 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS04905 a5a9ab8bc44d82b1ad319723e94fcb8d 199 Gene3D G3DSA:3.40.50.1240 1 191 4.1E-49 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS04905 a5a9ab8bc44d82b1ad319723e94fcb8d 199 PANTHER PTHR23029:SF1 1 190 1.3E-43 T 22-04-2016 RM25_RS04905 a5a9ab8bc44d82b1ad319723e94fcb8d 199 PANTHER PTHR23029 1 190 1.3E-43 T 22-04-2016 RM25_RS04905 a5a9ab8bc44d82b1ad319723e94fcb8d 199 SUPERFAMILY SSF53254 1 196 6.67E-50 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 Pfam PF00390 Malic enzyme, N-terminal domain 87 268 6.9E-69 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 SMART SM01274 86 268 9.0E-93 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 PANTHER PTHR23406:SF34 16 564 2.1E-254 T 22-04-2016 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 SUPERFAMILY SSF51735 278 560 1.03E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 SMART SM00919 278 532 1.9E-120 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 PANTHER PTHR23406 16 564 2.1E-254 T 22-04-2016 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 PIRSF PIRSF000106 2 563 4.9E-212 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 Gene3D G3DSA:3.40.50.720 276 561 6.7E-105 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 Pfam PF03949 Malic enzyme, NAD binding domain 278 531 3.4E-96 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 PRINTS PR00072 Malic enzyme signature 410 426 4.8E-70 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 PRINTS PR00072 Malic enzyme signature 92 116 4.8E-70 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 PRINTS PR00072 Malic enzyme signature 154 183 4.8E-70 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 PRINTS PR00072 Malic enzyme signature 305 321 4.8E-70 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 PRINTS PR00072 Malic enzyme signature 249 267 4.8E-70 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 PRINTS PR00072 Malic enzyme signature 274 290 4.8E-70 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 PRINTS PR00072 Malic enzyme signature 190 212 4.8E-70 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 Gene3D G3DSA:3.40.50.10380 21 275 3.4E-102 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 ProSitePatterns PS00331 Malic enzymes signature. 274 290 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 RM25_RS04035 a11f4f1ebda7f678ae30662b094be107 566 SUPERFAMILY SSF53223 6 277 2.81E-99 T 22-04-2016 RM25_RS10120 9cd0baa82e1fd45833402c16f0205912 403 PANTHER PTHR23515:SF6 1 396 2.0E-73 T 22-04-2016 RM25_RS10120 9cd0baa82e1fd45833402c16f0205912 403 Gene3D G3DSA:1.20.1250.20 3 197 1.3E-11 T 22-04-2016 RM25_RS10120 9cd0baa82e1fd45833402c16f0205912 403 Gene3D G3DSA:1.20.1250.20 199 392 3.9E-12 T 22-04-2016 RM25_RS10120 9cd0baa82e1fd45833402c16f0205912 403 Pfam PF07690 Major Facilitator Superfamily 3 268 9.1E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS10120 9cd0baa82e1fd45833402c16f0205912 403 SUPERFAMILY SSF103473 2 398 4.97E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS10120 9cd0baa82e1fd45833402c16f0205912 403 PANTHER PTHR23515 1 396 2.0E-73 T 22-04-2016 RM25_RS06010 af0673e16b4907ee4361173eac7160e2 268 Gene3D G3DSA:3.90.1200.10 53 235 2.5E-10 T 22-04-2016 RM25_RS06010 af0673e16b4907ee4361173eac7160e2 268 Pfam PF03881 Fructosamine kinase 11 262 1.6E-28 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase RM25_RS06010 af0673e16b4907ee4361173eac7160e2 268 SUPERFAMILY SSF56112 12 256 1.7E-23 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS06010 af0673e16b4907ee4361173eac7160e2 268 PANTHER PTHR12149:SF8 111 263 6.0E-17 T 22-04-2016 RM25_RS06010 af0673e16b4907ee4361173eac7160e2 268 PANTHER PTHR12149 111 263 6.0E-17 T 22-04-2016 RM25_RS06010 af0673e16b4907ee4361173eac7160e2 268 PIRSF PIRSF006221 1 268 4.5E-42 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase RM25_RS03770 6f9fafa83c9431bacff743eaa0736971 152 Pfam PF01047 MarR family 42 101 9.7E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS03770 6f9fafa83c9431bacff743eaa0736971 152 Gene3D G3DSA:1.10.10.10 5 149 4.5E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03770 6f9fafa83c9431bacff743eaa0736971 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 112 1.7E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS03770 6f9fafa83c9431bacff743eaa0736971 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 92 1.7E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS03770 6f9fafa83c9431bacff743eaa0736971 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 60 76 1.7E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS03770 6f9fafa83c9431bacff743eaa0736971 152 PANTHER PTHR33164:SF1 7 149 7.3E-33 T 22-04-2016 RM25_RS03770 6f9fafa83c9431bacff743eaa0736971 152 SUPERFAMILY SSF46785 5 150 7.29E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03770 6f9fafa83c9431bacff743eaa0736971 152 PANTHER PTHR33164 7 149 7.3E-33 T 22-04-2016 RM25_RS03770 6f9fafa83c9431bacff743eaa0736971 152 SMART SM00347 34 137 4.2E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS07805 1ce3950905ec5096156ef0210cd7e832 219 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 41 212 2.8E-31 T 22-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RM25_RS07805 1ce3950905ec5096156ef0210cd7e832 219 PANTHER PTHR35787 31 218 3.0E-20 T 22-04-2016 RM25_RS07805 1ce3950905ec5096156ef0210cd7e832 219 PIRSF PIRSF016897 30 218 1.7E-28 T 22-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RM25_RS07805 1ce3950905ec5096156ef0210cd7e832 219 Gene3D G3DSA:3.20.20.400 31 215 1.7E-35 T 22-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RM25_RS07805 1ce3950905ec5096156ef0210cd7e832 219 SUPERFAMILY SSF110391 40 213 7.59E-28 T 22-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RM25_RS06630 8cee9dcd167e9689d1b70fd1a9c9cc1a 120 PANTHER PTHR34039 1 119 6.7E-28 T 22-04-2016 RM25_RS06630 8cee9dcd167e9689d1b70fd1a9c9cc1a 120 PANTHER PTHR34039:SF1 1 119 6.7E-28 T 22-04-2016 RM25_RS06630 8cee9dcd167e9689d1b70fd1a9c9cc1a 120 Gene3D G3DSA:3.40.1350.10 9 118 1.5E-30 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 RM25_RS06630 8cee9dcd167e9689d1b70fd1a9c9cc1a 120 Hamap MF_00048 UPF0102 protein YraN [yraN]. 3 116 19.995 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 RM25_RS06630 8cee9dcd167e9689d1b70fd1a9c9cc1a 120 Pfam PF02021 Uncharacterised protein family UPF0102 10 103 3.3E-27 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 RM25_RS06630 8cee9dcd167e9689d1b70fd1a9c9cc1a 120 SUPERFAMILY SSF52980 8 106 4.42E-17 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RM25_RS01445 cb264fa14ea2f119ea4115da29da78c1 908 Pfam PF00498 FHA domain 819 896 7.9E-7 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RM25_RS01445 cb264fa14ea2f119ea4115da29da78c1 908 SUPERFAMILY SSF49879 795 898 1.6E-10 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 RM25_RS01445 cb264fa14ea2f119ea4115da29da78c1 908 SMART SM00240 816 874 0.0018 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RM25_RS01445 cb264fa14ea2f119ea4115da29da78c1 908 Gene3D G3DSA:2.60.200.20 809 900 2.5E-11 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RM25_RS10515 716c7cd26453223c9f91439d1a635c9f 239 SMART SM00345 23 81 7.7E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS10515 716c7cd26453223c9f91439d1a635c9f 239 SUPERFAMILY SSF46785 14 91 1.3E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10515 716c7cd26453223c9f91439d1a635c9f 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 81 2.3E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS10515 716c7cd26453223c9f91439d1a635c9f 239 Gene3D G3DSA:1.20.120.530 85 232 3.1E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RM25_RS10515 716c7cd26453223c9f91439d1a635c9f 239 PANTHER PTHR11751 21 108 5.9E-19 T 22-04-2016 RM25_RS10515 716c7cd26453223c9f91439d1a635c9f 239 SMART SM00895 92 225 3.5E-12 T 22-04-2016 IPR011711 GntR, C-terminal RM25_RS10515 716c7cd26453223c9f91439d1a635c9f 239 Gene3D G3DSA:1.10.10.10 10 83 3.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10515 716c7cd26453223c9f91439d1a635c9f 239 Pfam PF07729 FCD domain 92 224 1.5E-18 T 22-04-2016 IPR011711 GntR, C-terminal RM25_RS10515 716c7cd26453223c9f91439d1a635c9f 239 SUPERFAMILY SSF48008 88 229 6.8E-17 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RM25_RS07410 766f9f836a73e78472c9ae797b77e713 174 SUPERFAMILY SSF52172 15 142 8.64E-7 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS07410 766f9f836a73e78472c9ae797b77e713 174 Gene3D G3DSA:3.40.50.2300 15 140 9.0E-9 T 22-04-2016 RM25_RS06770 1ae9b736306a1628cc370494cedf8b95 561 SUPERFAMILY SSF56281 17 433 1.78E-93 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS06770 1ae9b736306a1628cc370494cedf8b95 561 Pfam PF00753 Metallo-beta-lactamase superfamily 26 173 1.6E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS06770 1ae9b736306a1628cc370494cedf8b95 561 PIRSF PIRSF004803 9 561 7.6E-206 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 RM25_RS06770 1ae9b736306a1628cc370494cedf8b95 561 SMART SM00849 29 224 8.8E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS06770 1ae9b736306a1628cc370494cedf8b95 561 PANTHER PTHR11203:SF22 8 561 7.2E-204 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 RM25_RS06770 1ae9b736306a1628cc370494cedf8b95 561 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 369 412 4.3E-9 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RM25_RS06770 1ae9b736306a1628cc370494cedf8b95 561 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 18 558 4.7E-151 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 RM25_RS06770 1ae9b736306a1628cc370494cedf8b95 561 Hamap MF_01491 Ribonuclease J [rnj]. 12 561 41.077 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 RM25_RS06770 1ae9b736306a1628cc370494cedf8b95 561 PANTHER PTHR11203 8 561 7.2E-204 T 22-04-2016 RM25_RS06770 1ae9b736306a1628cc370494cedf8b95 561 Gene3D G3DSA:3.60.15.10 15 264 6.2E-72 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS07595 7610a78aee3aa9daf676c58a11bf3eb3 237 Gene3D G3DSA:3.40.50.450 33 229 6.1E-63 T 22-04-2016 RM25_RS07595 7610a78aee3aa9daf676c58a11bf3eb3 237 PANTHER PTHR31223:SF1 13 228 6.1E-89 T 22-04-2016 RM25_RS07595 7610a78aee3aa9daf676c58a11bf3eb3 237 PANTHER PTHR31223 13 228 6.1E-89 T 22-04-2016 RM25_RS07595 7610a78aee3aa9daf676c58a11bf3eb3 237 SUPERFAMILY SSF102405 24 226 8.24E-63 T 22-04-2016 RM25_RS07595 7610a78aee3aa9daf676c58a11bf3eb3 237 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 54 226 6.5E-45 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RM25_RS07595 7610a78aee3aa9daf676c58a11bf3eb3 237 Pfam PF03641 Possible lysine decarboxylase 96 224 3.8E-33 T 22-04-2016 IPR031100 LOG family RM25_RS02900 a52e85da22d4fdd6e7f01d2c4058ee09 472 Pfam PF01256 Carbohydrate kinase 240 442 1.4E-35 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RM25_RS02900 a52e85da22d4fdd6e7f01d2c4058ee09 472 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 24 202 1.8E-31 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RM25_RS02900 a52e85da22d4fdd6e7f01d2c4058ee09 472 Pfam PF03853 YjeF-related protein N-terminus 24 182 1.2E-32 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RM25_RS02900 a52e85da22d4fdd6e7f01d2c4058ee09 472 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 213 465 15.43 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RM25_RS02900 a52e85da22d4fdd6e7f01d2c4058ee09 472 SUPERFAMILY SSF64153 4 234 8.11E-45 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RM25_RS02900 a52e85da22d4fdd6e7f01d2c4058ee09 472 Gene3D G3DSA:3.40.50.10260 4 219 7.9E-56 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RM25_RS02900 a52e85da22d4fdd6e7f01d2c4058ee09 472 PANTHER PTHR12592 1 435 8.5E-66 T 22-04-2016 RM25_RS02900 a52e85da22d4fdd6e7f01d2c4058ee09 472 PANTHER PTHR12592:SF0 1 435 8.5E-66 T 22-04-2016 RM25_RS02900 a52e85da22d4fdd6e7f01d2c4058ee09 472 Gene3D G3DSA:3.40.1190.20 220 463 1.9E-69 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS02900 a52e85da22d4fdd6e7f01d2c4058ee09 472 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 4 203 19.194 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RM25_RS02900 a52e85da22d4fdd6e7f01d2c4058ee09 472 PIRSF PIRSF017184 2 447 3.7E-87 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 RM25_RS02900 a52e85da22d4fdd6e7f01d2c4058ee09 472 SUPERFAMILY SSF53613 215 445 2.7E-48 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS05115 3b2144aa23c6130ae3c1df2e32164aef 400 TIGRFAM TIGR00033 aroC: chorismate synthase 2 372 6.7E-125 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05115 3b2144aa23c6130ae3c1df2e32164aef 400 PIRSF PIRSF001456 1 384 1.0E-120 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05115 3b2144aa23c6130ae3c1df2e32164aef 400 Gene3D G3DSA:3.60.150.10 1 391 2.2E-147 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05115 3b2144aa23c6130ae3c1df2e32164aef 400 PANTHER PTHR21085 107 398 3.0E-156 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05115 3b2144aa23c6130ae3c1df2e32164aef 400 PANTHER PTHR21085 1 89 3.0E-156 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05115 3b2144aa23c6130ae3c1df2e32164aef 400 SUPERFAMILY SSF103263 1 390 5.1E-132 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05115 3b2144aa23c6130ae3c1df2e32164aef 400 Pfam PF01264 Chorismate synthase 2 367 7.8E-114 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05115 3b2144aa23c6130ae3c1df2e32164aef 400 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05115 3b2144aa23c6130ae3c1df2e32164aef 400 Hamap MF_00300 Chorismate synthase [aroC]. 2 374 33.118 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS05115 3b2144aa23c6130ae3c1df2e32164aef 400 ProSitePatterns PS00789 Chorismate synthase signature 3. 341 357 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS03420 a5234333137d448567c82be48331771e 359 SUPERFAMILY SSF53448 2 279 2.51E-55 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS03420 a5234333137d448567c82be48331771e 359 PANTHER PTHR12526 153 289 8.0E-32 T 22-04-2016 RM25_RS03420 a5234333137d448567c82be48331771e 359 Pfam PF00483 Nucleotidyl transferase 4 279 8.5E-42 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RM25_RS03420 a5234333137d448567c82be48331771e 359 Gene3D G3DSA:3.90.550.10 3 271 7.8E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS03420 a5234333137d448567c82be48331771e 359 SUPERFAMILY SSF159283 284 350 3.66E-11 T 22-04-2016 RM25_RS01475 cfe932cee5c99a320ac044502f1772f2 218 PANTHER PTHR30450 13 218 1.4E-67 T 22-04-2016 RM25_RS01475 cfe932cee5c99a320ac044502f1772f2 218 Gene3D G3DSA:1.10.3720.10 9 216 9.1E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS01475 cfe932cee5c99a320ac044502f1772f2 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 201 7.8E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS01475 cfe932cee5c99a320ac044502f1772f2 218 SUPERFAMILY SSF161098 8 204 2.75E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS01475 cfe932cee5c99a320ac044502f1772f2 218 PANTHER PTHR30450:SF3 13 218 1.4E-67 T 22-04-2016 RM25_RS04250 6c836a5e1f2099bcf4492ef114ea7d44 242 Pfam PF01614 Bacterial transcriptional regulator 124 231 3.9E-17 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RM25_RS04250 6c836a5e1f2099bcf4492ef114ea7d44 242 PANTHER PTHR30136 1 241 7.0E-122 T 22-04-2016 RM25_RS04250 6c836a5e1f2099bcf4492ef114ea7d44 242 Pfam PF09339 IclR helix-turn-helix domain 10 57 3.3E-9 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RM25_RS04250 6c836a5e1f2099bcf4492ef114ea7d44 242 Gene3D G3DSA:1.10.10.10 3 73 2.5E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04250 6c836a5e1f2099bcf4492ef114ea7d44 242 SUPERFAMILY SSF55781 62 234 9.16E-35 T 22-04-2016 IPR029016 GAF domain-like RM25_RS04250 6c836a5e1f2099bcf4492ef114ea7d44 242 Gene3D G3DSA:3.30.450.40 74 228 1.6E-39 T 22-04-2016 IPR029016 GAF domain-like RM25_RS04250 6c836a5e1f2099bcf4492ef114ea7d44 242 PANTHER PTHR30136:SF18 1 241 7.0E-122 T 22-04-2016 RM25_RS04250 6c836a5e1f2099bcf4492ef114ea7d44 242 SMART SM00346 7 93 1.8E-16 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RM25_RS04250 6c836a5e1f2099bcf4492ef114ea7d44 242 SUPERFAMILY SSF46785 7 75 2.33E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03385 5b85769a388ae84efff96713a3cfd48f 167 PANTHER PTHR37938 5 159 4.2E-14 T 22-04-2016 RM25_RS03385 5b85769a388ae84efff96713a3cfd48f 167 Pfam PF03703 Bacterial PH domain 76 147 1.5E-21 T 22-04-2016 IPR005182 Domain of unknown function DUF304 RM25_RS03385 5b85769a388ae84efff96713a3cfd48f 167 PANTHER PTHR37938:SF1 5 159 4.2E-14 T 22-04-2016 RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 SUPERFAMILY SSF51246 337 455 1.52E-34 T 22-04-2016 IPR011054 Rudiment single hybrid motif RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 SMART SM00878 342 452 7.1E-49 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 Pfam PF00364 Biotin-requiring enzyme 526 590 3.2E-15 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 548 565 - T 22-04-2016 IPR001882 Biotin-binding site RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 123 330 1.7E-71 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 Gene3D G3DSA:3.30.1490.20 138 210 1.3E-22 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 SUPERFAMILY SSF51230 522 590 3.5E-18 T 22-04-2016 IPR011053 Single hybrid motif RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 294 301 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 Gene3D G3DSA:3.30.470.20 212 456 1.1E-83 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 Pfam PF00289 Biotin carboxylase, N-terminal domain 10 118 9.9E-43 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 Pfam PF02785 Biotin carboxylase C-terminal domain 342 452 3.8E-34 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 PANTHER PTHR18866:SF100 8 592 7.5E-257 T 22-04-2016 RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 SUPERFAMILY SSF56059 91 339 4.07E-58 T 22-04-2016 RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 SUPERFAMILY SSF52440 5 121 1.44E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 Gene3D G3DSA:2.40.50.100 522 590 1.1E-20 T 22-04-2016 RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 PANTHER PTHR18866 8 592 7.5E-257 T 22-04-2016 RM25_RS03310 881b7b6b2c157a9e5c4182d1542d0fce 593 Gene3D G3DSA:3.40.50.20 10 137 3.6E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RM25_RS05270 456837a24c42a0c417c3c40f0e05eb11 287 SUPERFAMILY SSF103481 42 131 8.11E-5 T 22-04-2016 RM25_RS05270 456837a24c42a0c417c3c40f0e05eb11 287 Pfam PF00892 EamA-like transporter family 141 271 2.1E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RM25_RS05270 456837a24c42a0c417c3c40f0e05eb11 287 PANTHER PTHR22911:SF37 23 274 2.4E-53 T 22-04-2016 RM25_RS05270 456837a24c42a0c417c3c40f0e05eb11 287 PANTHER PTHR22911 23 274 2.4E-53 T 22-04-2016 RM25_RS06655 f7050f68fcd62cacca8260ff199049ab 254 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 162 173 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS06655 f7050f68fcd62cacca8260ff199049ab 254 Gene3D G3DSA:1.10.1060.10 114 244 2.8E-21 T 22-04-2016 RM25_RS06655 f7050f68fcd62cacca8260ff199049ab 254 PANTHER PTHR11921:SF13 3 247 1.4E-112 T 22-04-2016 RM25_RS06655 f7050f68fcd62cacca8260ff199049ab 254 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RM25_RS06655 f7050f68fcd62cacca8260ff199049ab 254 Gene3D G3DSA:3.10.20.30 2 113 8.0E-28 T 22-04-2016 IPR012675 Beta-grasp domain RM25_RS06655 f7050f68fcd62cacca8260ff199049ab 254 SUPERFAMILY SSF54292 2 119 3.6E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RM25_RS06655 f7050f68fcd62cacca8260ff199049ab 254 PANTHER PTHR11921 3 247 1.4E-112 T 22-04-2016 RM25_RS06655 f7050f68fcd62cacca8260ff199049ab 254 Pfam PF13183 4Fe-4S dicluster domain 161 231 1.4E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RM25_RS06655 f7050f68fcd62cacca8260ff199049ab 254 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 123 8.2E-24 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RM25_RS06655 f7050f68fcd62cacca8260ff199049ab 254 SUPERFAMILY SSF46548 123 244 2.09E-22 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 SUPERFAMILY SSF51971 148 403 1.06E-65 T 22-04-2016 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 PANTHER PTHR11938:SF75 336 470 2.8E-147 T 22-04-2016 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 PANTHER PTHR11938:SF75 12 320 2.8E-147 T 22-04-2016 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 Gene3D G3DSA:3.50.50.60 238 402 1.3E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 5 472 3.2E-199 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 PANTHER PTHR11938 336 470 2.8E-147 T 22-04-2016 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 PANTHER PTHR11938 12 320 2.8E-147 T 22-04-2016 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 Gene3D G3DSA:1.10.1060.10 3 150 1.1E-34 T 22-04-2016 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 43 130 2.1E-19 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 458 1.5E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 PRINTS PR00419 Adrenodoxin reductase family signature 287 301 9.2E-23 T 22-04-2016 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 PRINTS PR00419 Adrenodoxin reductase family signature 214 224 9.2E-23 T 22-04-2016 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 9.2E-23 T 22-04-2016 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 9.2E-23 T 22-04-2016 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 SUPERFAMILY SSF46548 6 157 8.89E-34 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 SUPERFAMILY SSF51971 371 465 1.29E-10 T 22-04-2016 RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 Gene3D G3DSA:3.40.50.720 151 237 3.6E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04955 e289906ce3f6511e7fa02369ec946d9f 489 Gene3D G3DSA:3.40.50.720 403 476 3.6E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS12040 b5150bdb5c8770afb327ec116f2f4fce 1224 SMART SM00257 367 416 0.021 T 22-04-2016 IPR018392 LysM domain RM25_RS12040 b5150bdb5c8770afb327ec116f2f4fce 1224 SMART SM00257 163 213 3.2 T 22-04-2016 IPR018392 LysM domain RM25_RS12040 b5150bdb5c8770afb327ec116f2f4fce 1224 SMART SM01043 1076 1215 9.7E-4 T 22-04-2016 IPR005158 Bacterial transcriptional activator domain RM25_RS12040 b5150bdb5c8770afb327ec116f2f4fce 1224 Gene3D G3DSA:3.10.350.10 369 416 2.7E-6 T 22-04-2016 IPR018392 LysM domain RM25_RS12040 b5150bdb5c8770afb327ec116f2f4fce 1224 Pfam PF01476 LysM domain 369 416 1.3E-6 T 22-04-2016 IPR018392 LysM domain RM25_RS12040 b5150bdb5c8770afb327ec116f2f4fce 1224 Pfam PF01476 LysM domain 164 213 0.065 T 22-04-2016 IPR018392 LysM domain RM25_RS06095 d44ce702f0a10723681f3612976235e7 324 Pfam PF00092 von Willebrand factor type A domain 94 282 8.0E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS06095 d44ce702f0a10723681f3612976235e7 324 PANTHER PTHR22550:SF8 1 286 9.7E-28 T 22-04-2016 RM25_RS06095 d44ce702f0a10723681f3612976235e7 324 SMART SM00327 91 289 3.1E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS06095 d44ce702f0a10723681f3612976235e7 324 Gene3D G3DSA:3.40.50.410 88 288 5.3E-26 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS06095 d44ce702f0a10723681f3612976235e7 324 Pfam PF07584 Aerotolerance regulator N-terminal 8 81 4.6E-7 T 22-04-2016 IPR024163 Aerotolerance regulator, N-terminal RM25_RS06095 d44ce702f0a10723681f3612976235e7 324 SUPERFAMILY SSF53300 88 287 5.5E-32 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS06095 d44ce702f0a10723681f3612976235e7 324 PANTHER PTHR22550 1 286 9.7E-28 T 22-04-2016 RM25_RS00675 d6cddb0dc27e780b452d41a89c6dc6ba 395 PANTHER PTHR30294 1 385 1.8E-63 T 22-04-2016 RM25_RS00675 d6cddb0dc27e780b452d41a89c6dc6ba 395 Pfam PF12698 ABC-2 family transporter protein 17 381 2.4E-39 T 22-04-2016 RM25_RS00675 d6cddb0dc27e780b452d41a89c6dc6ba 395 PANTHER PTHR30294:SF12 1 385 1.8E-63 T 22-04-2016 RM25_RS03000 4cf8ac8f1030d66ecdb506f2d1ed7634 367 SMART SM01240 12 367 4.8E-19 T 22-04-2016 RM25_RS03000 4cf8ac8f1030d66ecdb506f2d1ed7634 367 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 14 297 8.5E-37 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 RM25_RS03000 4cf8ac8f1030d66ecdb506f2d1ed7634 367 Gene3D G3DSA:3.20.20.70 15 366 1.0E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS03000 4cf8ac8f1030d66ecdb506f2d1ed7634 367 TIGRFAM TIGR01304 IMP_DH_rel_2: IMP dehydrogenase family protein 3 366 2.9E-167 T 22-04-2016 IPR005992 IMP dehydrogenase-related 2 GO:0016491|GO:0055114 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- RM25_RS03000 4cf8ac8f1030d66ecdb506f2d1ed7634 367 SUPERFAMILY SSF51412 112 367 8.77E-70 T 22-04-2016 RM25_RS03000 4cf8ac8f1030d66ecdb506f2d1ed7634 367 SUPERFAMILY SSF51412 10 75 8.77E-70 T 22-04-2016 RM25_RS01750 8b23d1eba75bbcefbb4d538fc18f46b7 208 Pfam PF02132 RecR protein 38 77 1.8E-16 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger RM25_RS01750 8b23d1eba75bbcefbb4d538fc18f46b7 208 PANTHER PTHR30446 1 200 6.7E-111 T 22-04-2016 RM25_RS01750 8b23d1eba75bbcefbb4d538fc18f46b7 208 SMART SM00493 79 164 6.9E-14 T 22-04-2016 IPR006171 Toprim domain RM25_RS01750 8b23d1eba75bbcefbb4d538fc18f46b7 208 Gene3D G3DSA:3.40.50.140 122 170 3.1E-4 T 22-04-2016 IPR006171 Toprim domain RM25_RS01750 8b23d1eba75bbcefbb4d538fc18f46b7 208 Pfam PF13662 Toprim domain 80 171 1.2E-25 T 22-04-2016 IPR006171 Toprim domain RM25_RS01750 8b23d1eba75bbcefbb4d538fc18f46b7 208 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 104.14 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RM25_RS01750 8b23d1eba75bbcefbb4d538fc18f46b7 208 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 RM25_RS01750 8b23d1eba75bbcefbb4d538fc18f46b7 208 SUPERFAMILY SSF111304 2 198 5.75E-73 T 22-04-2016 IPR023627 Recombination protein RecR RM25_RS01750 8b23d1eba75bbcefbb4d538fc18f46b7 208 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 6.8E-80 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RM25_RS01750 8b23d1eba75bbcefbb4d538fc18f46b7 208 PANTHER PTHR30446:SF0 1 200 6.7E-111 T 22-04-2016 RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 PANTHER PTHR26402 6 224 1.6E-91 T 22-04-2016 RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 218 1.5E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 SUPERFAMILY SSF46894 157 225 4.08E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 PANTHER PTHR26402:SF564 6 224 1.6E-91 T 22-04-2016 RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 SMART SM00448 6 122 9.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 Gene3D G3DSA:1.10.10.10 131 225 4.6E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 Gene3D G3DSA:3.40.50.2300 3 130 1.1E-33 T 22-04-2016 RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 SUPERFAMILY SSF52172 5 137 5.41E-30 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 Pfam PF00072 Response regulator receiver domain 9 123 5.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 SMART SM00421 161 218 9.7E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 ProSitePatterns PS00622 LuxR-type HTH domain signature. 178 205 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 194 9.4E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 178 9.4E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00835 4b4927aaea9fe0bf11b564d22fd13887 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 206 9.4E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS10080 e4ed54b17142ae709e553d629d732f1d 333 SUPERFAMILY SSF53098 137 148 4.68E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10080 e4ed54b17142ae709e553d629d732f1d 333 SUPERFAMILY SSF53098 187 328 4.68E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10080 e4ed54b17142ae709e553d629d732f1d 333 SUPERFAMILY SSF46689 4 107 3.23E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10080 e4ed54b17142ae709e553d629d732f1d 333 Gene3D G3DSA:3.30.420.10 190 321 2.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10080 e4ed54b17142ae709e553d629d732f1d 333 Gene3D G3DSA:3.30.420.10 130 158 2.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10080 e4ed54b17142ae709e553d629d732f1d 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 74 4.3E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS10080 e4ed54b17142ae709e553d629d732f1d 333 Pfam PF00665 Integrase core domain 136 284 1.9E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS10080 e4ed54b17142ae709e553d629d732f1d 333 PANTHER PTHR24559 183 316 2.6E-16 T 22-04-2016 RM25_RS10080 e4ed54b17142ae709e553d629d732f1d 333 PANTHER PTHR24559 125 149 2.6E-16 T 22-04-2016 RM25_RS10080 e4ed54b17142ae709e553d629d732f1d 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04930 c2d01dba2573988d081e11301ad68f23 258 Gene3D G3DSA:3.20.20.70 1 257 6.3E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS04930 c2d01dba2573988d081e11301ad68f23 258 PANTHER PTHR22854:SF2 1 258 7.1E-100 T 22-04-2016 RM25_RS04930 c2d01dba2573988d081e11301ad68f23 258 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 32 254 29.38 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RM25_RS04930 c2d01dba2573988d081e11301ad68f23 258 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 52 69 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RM25_RS04930 c2d01dba2573988d081e11301ad68f23 258 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 258 33.579 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RM25_RS04930 c2d01dba2573988d081e11301ad68f23 258 PANTHER PTHR22854 1 258 7.1E-100 T 22-04-2016 RM25_RS04930 c2d01dba2573988d081e11301ad68f23 258 Pfam PF00218 Indole-3-glycerol phosphate synthase 48 255 5.3E-80 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RM25_RS04930 c2d01dba2573988d081e11301ad68f23 258 SUPERFAMILY SSF51366 15 257 9.54E-77 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RM25_RS09245 ba18dfc74ab75e154daf9af0d95c04c7 628 PANTHER PTHR11649:SF37 189 470 1.2E-195 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 RM25_RS09245 ba18dfc74ab75e154daf9af0d95c04c7 628 PANTHER PTHR11649:SF37 1 143 1.2E-195 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 RM25_RS09245 ba18dfc74ab75e154daf9af0d95c04c7 628 PANTHER PTHR11649:SF37 489 619 1.2E-195 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 RM25_RS09245 ba18dfc74ab75e154daf9af0d95c04c7 628 SUPERFAMILY SSF52540 1 160 5.95E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09245 ba18dfc74ab75e154daf9af0d95c04c7 628 PANTHER PTHR11649 1 143 1.2E-195 T 22-04-2016 RM25_RS09245 ba18dfc74ab75e154daf9af0d95c04c7 628 PANTHER PTHR11649 489 619 1.2E-195 T 22-04-2016 RM25_RS09245 ba18dfc74ab75e154daf9af0d95c04c7 628 Pfam PF02421 Ferrous iron transport protein B 1 155 1.3E-43 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 RM25_RS09245 ba18dfc74ab75e154daf9af0d95c04c7 628 Pfam PF07670 Nucleoside recognition 443 599 7.2E-25 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 RM25_RS09245 ba18dfc74ab75e154daf9af0d95c04c7 628 Pfam PF07670 Nucleoside recognition 273 366 3.8E-12 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 RM25_RS09245 ba18dfc74ab75e154daf9af0d95c04c7 628 PANTHER PTHR11649 189 470 1.2E-195 T 22-04-2016 RM25_RS09245 ba18dfc74ab75e154daf9af0d95c04c7 628 Pfam PF07664 Ferrous iron transport protein B C terminus 385 437 9.3E-17 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 RM25_RS09245 ba18dfc74ab75e154daf9af0d95c04c7 628 Gene3D G3DSA:3.40.50.300 1 158 1.5E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06565 23fead432868d6b89efa8923505817cb 666 PANTHER PTHR23076 62 658 8.3E-255 T 22-04-2016 RM25_RS06565 23fead432868d6b89efa8923505817cb 666 SUPERFAMILY SSF52540 221 468 1.61E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06565 23fead432868d6b89efa8923505817cb 666 ProSitePatterns PS00674 AAA-protein family signature. 368 386 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RM25_RS06565 23fead432868d6b89efa8923505817cb 666 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 24 664 33.543 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RM25_RS06565 23fead432868d6b89efa8923505817cb 666 SMART SM00382 260 400 2.5E-22 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS06565 23fead432868d6b89efa8923505817cb 666 SUPERFAMILY SSF140990 478 658 3.01E-61 T 22-04-2016 RM25_RS06565 23fead432868d6b89efa8923505817cb 666 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 264 396 1.9E-40 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RM25_RS06565 23fead432868d6b89efa8923505817cb 666 Pfam PF01434 Peptidase family M41 460 657 3.1E-68 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RM25_RS06565 23fead432868d6b89efa8923505817cb 666 Pfam PF06480 FtsH Extracellular 69 167 9.0E-10 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 RM25_RS06565 23fead432868d6b89efa8923505817cb 666 Gene3D G3DSA:1.10.8.60 407 473 5.0E-27 T 22-04-2016 RM25_RS06565 23fead432868d6b89efa8923505817cb 666 Gene3D G3DSA:3.40.50.300 224 406 1.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06565 23fead432868d6b89efa8923505817cb 666 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 176 656 1.8E-191 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RM25_RS01130 7972f67a0b20a767ee007cbf60fc5649 97 PANTHER PTHR10617 8 97 7.9E-13 T 22-04-2016 RM25_RS01130 7972f67a0b20a767ee007cbf60fc5649 97 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 18 92 3.1E-7 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 RM25_RS01130 7972f67a0b20a767ee007cbf60fc5649 97 PIRSF PIRSF036548 2 97 6.0E-25 T 22-04-2016 IPR012206 Ferredoxin-like, FixX GO:0005506 RM25_RS01130 7972f67a0b20a767ee007cbf60fc5649 97 PANTHER PTHR10617:SF119 8 97 7.9E-13 T 22-04-2016 RM25_RS01130 7972f67a0b20a767ee007cbf60fc5649 97 Gene3D G3DSA:3.30.70.20 32 85 9.2E-7 T 22-04-2016 RM25_RS01130 7972f67a0b20a767ee007cbf60fc5649 97 SUPERFAMILY SSF54862 43 94 1.33E-12 T 22-04-2016 RM25_RS09485 5242143ba628504c2557b2e0829f9683 292 PANTHER PTHR10359 16 240 7.7E-61 T 22-04-2016 RM25_RS09485 5242143ba628504c2557b2e0829f9683 292 SUPERFAMILY SSF48150 7 222 9.58E-63 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RM25_RS09485 5242143ba628504c2557b2e0829f9683 292 Gene3D G3DSA:1.10.1670.10 126 222 8.7E-35 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RM25_RS09485 5242143ba628504c2557b2e0829f9683 292 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 196 212 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site RM25_RS09485 5242143ba628504c2557b2e0829f9683 292 ProSitePatterns PS01155 Endonuclease III family signature. 105 134 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 RM25_RS09485 5242143ba628504c2557b2e0829f9683 292 Pfam PF00633 Helix-hairpin-helix motif 103 131 3.4E-9 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RM25_RS09485 5242143ba628504c2557b2e0829f9683 292 SMART SM00478 42 194 9.4E-32 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RM25_RS09485 5242143ba628504c2557b2e0829f9683 292 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 167 5.9E-11 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RM25_RS09485 5242143ba628504c2557b2e0829f9683 292 Gene3D G3DSA:1.10.340.30 26 125 2.6E-33 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RM25_RS00350 f48ba8d557422980904e57b7224acea0 256 SMART SM00382 66 255 4.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS00350 f48ba8d557422980904e57b7224acea0 256 SUPERFAMILY SSF52540 53 249 2.25E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00350 f48ba8d557422980904e57b7224acea0 256 Gene3D G3DSA:3.40.50.300 51 249 9.8E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00350 f48ba8d557422980904e57b7224acea0 256 PANTHER PTHR24220:SF117 54 250 9.3E-90 T 22-04-2016 RM25_RS00350 f48ba8d557422980904e57b7224acea0 256 PANTHER PTHR24220:SF117 19 31 9.3E-90 T 22-04-2016 RM25_RS00350 f48ba8d557422980904e57b7224acea0 256 PANTHER PTHR24220 54 250 9.3E-90 T 22-04-2016 RM25_RS00350 f48ba8d557422980904e57b7224acea0 256 PANTHER PTHR24220 19 31 9.3E-90 T 22-04-2016 RM25_RS00350 f48ba8d557422980904e57b7224acea0 256 Pfam PF00005 ABC transporter 57 188 1.8E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS00540 7c5f61a81337ff55db16b37f6e9a3244 275 PIRSF PIRSF039085 18 271 1.6E-121 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RM25_RS00540 7c5f61a81337ff55db16b37f6e9a3244 275 Pfam PF00005 ABC transporter 37 195 2.2E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS00540 7c5f61a81337ff55db16b37f6e9a3244 275 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS00540 7c5f61a81337ff55db16b37f6e9a3244 275 PANTHER PTHR24220 23 273 5.5E-134 T 22-04-2016 RM25_RS00540 7c5f61a81337ff55db16b37f6e9a3244 275 SUPERFAMILY SSF52540 23 265 7.31E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00540 7c5f61a81337ff55db16b37f6e9a3244 275 Gene3D G3DSA:3.40.50.300 23 267 1.8E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00540 7c5f61a81337ff55db16b37f6e9a3244 275 SMART SM00382 46 243 5.5E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS00540 7c5f61a81337ff55db16b37f6e9a3244 275 PANTHER PTHR24220:SF327 23 273 5.5E-134 T 22-04-2016 RM25_RS03580 a9705b0af9a4d261756369f72e340bda 728 PANTHER PTHR23408 38 703 0.0 T 22-04-2016 RM25_RS03580 a9705b0af9a4d261756369f72e340bda 728 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 596 725 2.1E-64 T 22-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 RM25_RS03580 a9705b0af9a4d261756369f72e340bda 728 PANTHER PTHR23408:SF1 38 703 0.0 T 22-04-2016 RM25_RS03580 a9705b0af9a4d261756369f72e340bda 728 Pfam PF02310 B12 binding domain 599 702 4.6E-14 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RM25_RS03580 a9705b0af9a4d261756369f72e340bda 728 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 38 564 3.9E-288 T 22-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 RM25_RS03580 a9705b0af9a4d261756369f72e340bda 728 SUPERFAMILY SSF51703 29 559 4.45E-215 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 RM25_RS03580 a9705b0af9a4d261756369f72e340bda 728 Pfam PF01642 Methylmalonyl-CoA mutase 40 557 4.2E-225 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 RM25_RS03580 a9705b0af9a4d261756369f72e340bda 728 Gene3D G3DSA:3.40.50.280 563 723 3.6E-70 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RM25_RS03580 a9705b0af9a4d261756369f72e340bda 728 SUPERFAMILY SSF52242 562 727 4.71E-58 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RM25_RS03580 a9705b0af9a4d261756369f72e340bda 728 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 381 406 - T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 RM25_RS03580 a9705b0af9a4d261756369f72e340bda 728 Gene3D G3DSA:3.20.20.240 38 506 5.1E-202 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 PANTHER PTHR11922:SF2 4 514 1.8E-259 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 517 1.5E-143 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 Gene3D G3DSA:3.40.50.620 214 391 3.6E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 PANTHER PTHR11922 4 514 1.8E-259 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 SUPERFAMILY SSF52317 4 227 4.29E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 167 180 1.6E-7 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 1.6E-7 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 1.6E-7 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 5 517 52.831 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 Pfam PF03054 tRNA methyl transferase 218 248 1.4E-4 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 8 194 1.4E-70 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 Pfam PF00958 GMP synthase C terminal domain 424 516 1.5E-37 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.1E-5 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.1E-5 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 PRINTS PR00097 Anthranilate synthase component II signature 167 180 1.1E-5 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 SUPERFAMILY SSF52402 183 437 5.73E-57 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 Gene3D G3DSA:3.40.50.880 4 213 8.6E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 8 22 1.8E-6 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.8E-6 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.8E-6 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 SUPERFAMILY SSF54810 396 517 7.45E-46 T 22-04-2016 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 Pfam PF00117 Glutamine amidotransferase class-I 10 189 1.8E-36 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RM25_RS03080 0db6c24aed7d25b9bf96b215850100b5 517 Gene3D G3DSA:3.30.300.10 392 517 7.2E-48 T 22-04-2016 RM25_RS02315 a8aedeb0c770256ba66499654bce087f 227 PANTHER PTHR24220 9 213 2.1E-54 T 22-04-2016 RM25_RS02315 a8aedeb0c770256ba66499654bce087f 227 SUPERFAMILY SSF52540 6 213 1.96E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02315 a8aedeb0c770256ba66499654bce087f 227 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS02315 a8aedeb0c770256ba66499654bce087f 227 Gene3D G3DSA:3.40.50.300 4 213 1.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02315 a8aedeb0c770256ba66499654bce087f 227 SMART SM00382 32 214 6.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS02315 a8aedeb0c770256ba66499654bce087f 227 Pfam PF00005 ABC transporter 24 163 1.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS04165 be198775e521bc73cf06b3bdfcaa5420 498 PANTHER PTHR22642 41 497 3.9E-86 T 22-04-2016 RM25_RS04165 be198775e521bc73cf06b3bdfcaa5420 498 Gene3D G3DSA:2.30.40.10 2 96 5.8E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RM25_RS04165 be198775e521bc73cf06b3bdfcaa5420 498 Gene3D G3DSA:3.20.20.140 179 452 1.8E-33 T 22-04-2016 RM25_RS04165 be198775e521bc73cf06b3bdfcaa5420 498 PANTHER PTHR22642:SF2 41 497 3.9E-86 T 22-04-2016 RM25_RS04165 be198775e521bc73cf06b3bdfcaa5420 498 Pfam PF07969 Amidohydrolase family 42 493 1.6E-64 T 22-04-2016 IPR013108 Amidohydrolase 3 RM25_RS04165 be198775e521bc73cf06b3bdfcaa5420 498 SUPERFAMILY SSF51556 53 114 5.02E-28 T 22-04-2016 IPR032466 Metal-dependent hydrolase RM25_RS04165 be198775e521bc73cf06b3bdfcaa5420 498 SUPERFAMILY SSF51556 177 450 5.02E-28 T 22-04-2016 IPR032466 Metal-dependent hydrolase RM25_RS04165 be198775e521bc73cf06b3bdfcaa5420 498 Gene3D G3DSA:2.30.40.10 454 480 8.5E-5 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RM25_RS04165 be198775e521bc73cf06b3bdfcaa5420 498 SUPERFAMILY SSF51338 453 494 3.99E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RM25_RS04165 be198775e521bc73cf06b3bdfcaa5420 498 SUPERFAMILY SSF51338 2 54 3.99E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RM25_RS04875 35701367df138caaf7aaf05bd36348fd 205 SUPERFAMILY SSF144091 2 179 4.97E-38 T 22-04-2016 RM25_RS04875 35701367df138caaf7aaf05bd36348fd 205 Pfam PF01694 Rhomboid family 37 174 3.3E-24 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RM25_RS04875 35701367df138caaf7aaf05bd36348fd 205 Gene3D G3DSA:1.20.1540.10 2 172 1.8E-33 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RM25_RS04875 35701367df138caaf7aaf05bd36348fd 205 PANTHER PTHR22936 3 188 5.3E-32 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 RM25_RS02640 8a367e655bd9fd08c557ce840be912bf 272 PANTHER PTHR11760:SF19 2 242 2.6E-125 T 22-04-2016 RM25_RS02640 8a367e655bd9fd08c557ce840be912bf 272 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site RM25_RS02640 8a367e655bd9fd08c557ce840be912bf 272 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 4.9E-91 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RM25_RS02640 8a367e655bd9fd08c557ce840be912bf 272 SUPERFAMILY SSF54821 106 205 1.09E-37 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RM25_RS02640 8a367e655bd9fd08c557ce840be912bf 272 SUPERFAMILY SSF54814 2 105 5.49E-35 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RM25_RS02640 8a367e655bd9fd08c557ce840be912bf 272 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 1.3E-37 T 22-04-2016 RM25_RS02640 8a367e655bd9fd08c557ce840be912bf 272 SMART SM00322 59 124 2.8E-5 T 22-04-2016 IPR004087 K Homology domain GO:0003676 RM25_RS02640 8a367e655bd9fd08c557ce840be912bf 272 Pfam PF07650 KH domain 37 109 2.9E-18 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RM25_RS02640 8a367e655bd9fd08c557ce840be912bf 272 Gene3D G3DSA:3.30.1140.32 107 206 2.2E-43 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RM25_RS02640 8a367e655bd9fd08c557ce840be912bf 272 PANTHER PTHR11760 2 242 2.6E-125 T 22-04-2016 RM25_RS02640 8a367e655bd9fd08c557ce840be912bf 272 Gene3D G3DSA:3.30.300.20 17 106 4.9E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RM25_RS02640 8a367e655bd9fd08c557ce840be912bf 272 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 37.257 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RM25_RS11540 b23d16558d273ca19b33e1c3534edb55 489 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 188 249 4.3E-20 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RM25_RS11540 b23d16558d273ca19b33e1c3534edb55 489 PANTHER PTHR13734 15 482 3.7E-97 T 22-04-2016 RM25_RS11540 b23d16558d273ca19b33e1c3534edb55 489 Pfam PF01743 Poly A polymerase head domain 33 161 4.3E-33 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 RM25_RS11540 b23d16558d273ca19b33e1c3534edb55 489 SMART SM00471 259 432 2.1E-4 T 22-04-2016 IPR003607 HD/PDEase domain RM25_RS11540 b23d16558d273ca19b33e1c3534edb55 489 PANTHER PTHR13734:SF5 15 482 3.7E-97 T 22-04-2016 RM25_RS11540 b23d16558d273ca19b33e1c3534edb55 489 SUPERFAMILY SSF81301 15 158 9.81E-35 T 22-04-2016 RM25_RS11540 b23d16558d273ca19b33e1c3534edb55 489 TIGRFAM TIGR00277 HDIG: HDIG domain 260 351 5.7E-16 T 22-04-2016 IPR006675 HDIG domain RM25_RS11540 b23d16558d273ca19b33e1c3534edb55 489 TIGRFAM TIGR02692 tRNA_CCA_actino: CCA tRNA nucleotidyltransferase 7 481 3.6E-216 T 22-04-2016 IPR014065 tRNA adenylyltransferase RM25_RS11540 b23d16558d273ca19b33e1c3534edb55 489 Gene3D G3DSA:1.10.3090.10 160 409 2.0E-56 T 22-04-2016 RM25_RS11540 b23d16558d273ca19b33e1c3534edb55 489 SUPERFAMILY SSF81891 159 481 2.22E-63 T 22-04-2016 RM25_RS11540 b23d16558d273ca19b33e1c3534edb55 489 Pfam PF01966 HD domain 263 396 3.3E-13 T 22-04-2016 IPR006674 HD domain RM25_RS11540 b23d16558d273ca19b33e1c3534edb55 489 Gene3D G3DSA:3.30.460.10 16 159 4.8E-41 T 22-04-2016 RM25_RS06340 0a4c371e6aac3f8e579c2dbd658897d2 285 Gene3D G3DSA:3.40.50.1000 187 282 4.5E-44 T 22-04-2016 IPR023214 HAD-like domain RM25_RS06340 0a4c371e6aac3f8e579c2dbd658897d2 285 Gene3D G3DSA:3.40.50.1000 19 92 4.5E-44 T 22-04-2016 IPR023214 HAD-like domain RM25_RS06340 0a4c371e6aac3f8e579c2dbd658897d2 285 ProSitePatterns PS01229 Hypothetical cof family signature 2. 232 254 - T 22-04-2016 RM25_RS06340 0a4c371e6aac3f8e579c2dbd658897d2 285 PANTHER PTHR10000 16 284 4.7E-52 T 22-04-2016 RM25_RS06340 0a4c371e6aac3f8e579c2dbd658897d2 285 SUPERFAMILY SSF56784 19 282 2.49E-54 T 22-04-2016 IPR023214 HAD-like domain RM25_RS06340 0a4c371e6aac3f8e579c2dbd658897d2 285 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 21 251 2.6E-18 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 RM25_RS06340 0a4c371e6aac3f8e579c2dbd658897d2 285 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 22 278 6.6E-42 T 22-04-2016 IPR000150 Cof protein GO:0016787 RM25_RS06340 0a4c371e6aac3f8e579c2dbd658897d2 285 Pfam PF08282 haloacid dehalogenase-like hydrolase 22 278 4.6E-42 T 22-04-2016 IPR023214 HAD-like domain RM25_RS06340 0a4c371e6aac3f8e579c2dbd658897d2 285 PANTHER PTHR10000:SF8 16 284 4.7E-52 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 775 792 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 PANTHER PTHR11615 659 834 7.1E-287 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 PANTHER PTHR11615:SF35 27 386 7.1E-287 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 SUPERFAMILY SSF53706 2 1064 9.09E-300 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 PANTHER PTHR11615:SF35 850 879 7.1E-287 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 PANTHER PTHR11615:SF35 992 1109 7.1E-287 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 20 1107 0.0 T 22-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 Pfam PF00384 Molybdopterin oxidoreductase 101 829 2.6E-126 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 Gene3D G3DSA:3.40.50.740 594 779 1.9E-48 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 PANTHER PTHR11615:SF35 659 834 7.1E-287 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 Gene3D G3DSA:3.90.55.10 780 825 2.6E-5 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 PANTHER PTHR11615 850 879 7.1E-287 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 Gene3D G3DSA:3.40.228.10 474 593 6.8E-75 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 Gene3D G3DSA:3.40.228.10 214 330 6.8E-75 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 PANTHER PTHR11615 27 386 7.1E-287 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 PANTHER PTHR11615 992 1109 7.1E-287 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 SMART SM00926 36 98 2.4E-6 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 Gene3D G3DSA:3.40.50.740 142 206 2.8E-9 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 Gene3D G3DSA:3.40.50.740 101 110 2.8E-9 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 Gene3D G3DSA:2.20.25.90 45 90 6.0E-30 T 22-04-2016 RM25_RS10125 88105148ac806c70313746e179d2c0df 1109 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 41 59 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RM25_RS00900 d3fc3313b44d8a3297b0d9c5ad354a03 565 Gene3D G3DSA:1.20.1250.20 47 220 1.2E-20 T 22-04-2016 RM25_RS00900 d3fc3313b44d8a3297b0d9c5ad354a03 565 Gene3D G3DSA:1.20.1250.20 299 493 4.0E-22 T 22-04-2016 RM25_RS00900 d3fc3313b44d8a3297b0d9c5ad354a03 565 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 42 455 6.8E-80 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RM25_RS00900 d3fc3313b44d8a3297b0d9c5ad354a03 565 PANTHER PTHR23501 44 533 5.9E-125 T 22-04-2016 RM25_RS00900 d3fc3313b44d8a3297b0d9c5ad354a03 565 Pfam PF07690 Major Facilitator Superfamily 47 446 2.3E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS00900 d3fc3313b44d8a3297b0d9c5ad354a03 565 PANTHER PTHR23501:SF66 44 533 5.9E-125 T 22-04-2016 RM25_RS00900 d3fc3313b44d8a3297b0d9c5ad354a03 565 SUPERFAMILY SSF103473 37 224 3.53E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS00900 d3fc3313b44d8a3297b0d9c5ad354a03 565 SUPERFAMILY SSF103473 285 491 3.53E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS10520 344ca0da74fb68cacb3a771b0a1321d9 435 PANTHER PTHR11662 24 430 7.2E-97 T 22-04-2016 RM25_RS10520 344ca0da74fb68cacb3a771b0a1321d9 435 PANTHER PTHR11662:SF3 24 430 7.2E-97 T 22-04-2016 RM25_RS10520 344ca0da74fb68cacb3a771b0a1321d9 435 Pfam PF07690 Major Facilitator Superfamily 34 389 6.9E-59 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS10520 344ca0da74fb68cacb3a771b0a1321d9 435 Gene3D G3DSA:1.20.1250.20 27 220 5.4E-46 T 22-04-2016 RM25_RS10520 344ca0da74fb68cacb3a771b0a1321d9 435 SUPERFAMILY SSF103473 18 429 1.96E-79 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS10520 344ca0da74fb68cacb3a771b0a1321d9 435 Gene3D G3DSA:1.20.1250.20 243 423 4.1E-21 T 22-04-2016 RM25_RS05260 b66760aa915098dd8ee819843957a90e 192 SUPERFAMILY SSF46689 2 66 1.49E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS05260 b66760aa915098dd8ee819843957a90e 192 PANTHER PTHR30055:SF71 2 173 7.0E-16 T 22-04-2016 RM25_RS05260 b66760aa915098dd8ee819843957a90e 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 2.1E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS05260 b66760aa915098dd8ee819843957a90e 192 Gene3D G3DSA:1.10.357.10 2 176 7.1E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS05260 b66760aa915098dd8ee819843957a90e 192 PANTHER PTHR30055 2 173 7.0E-16 T 22-04-2016 RM25_RS05260 b66760aa915098dd8ee819843957a90e 192 SUPERFAMILY SSF48498 83 177 7.11E-23 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RM25_RS05260 b66760aa915098dd8ee819843957a90e 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.9E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS05260 b66760aa915098dd8ee819843957a90e 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.9E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS03950 be3a3caebdfb1d044a10e47edeccc7a0 928 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 498 907 7.7E-146 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RM25_RS03950 be3a3caebdfb1d044a10e47edeccc7a0 928 PANTHER PTHR30001 283 918 2.4E-253 T 22-04-2016 RM25_RS03950 be3a3caebdfb1d044a10e47edeccc7a0 928 Pfam PF10150 Ribonuclease E/G family 603 877 2.0E-99 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RM25_RS03950 be3a3caebdfb1d044a10e47edeccc7a0 928 PANTHER PTHR30001:SF0 283 918 2.4E-253 T 22-04-2016 RM25_RS03950 be3a3caebdfb1d044a10e47edeccc7a0 928 Gene3D G3DSA:2.40.50.140 515 607 3.3E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS03950 be3a3caebdfb1d044a10e47edeccc7a0 928 SMART SM00316 521 601 2.4E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 RM25_RS03950 be3a3caebdfb1d044a10e47edeccc7a0 928 SUPERFAMILY SSF50249 523 607 2.23E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05790 1979c7550701a153f8e3d7289f837c0f 414 Gene3D G3DSA:3.40.50.1820 16 240 4.8E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS05790 1979c7550701a153f8e3d7289f837c0f 414 Gene3D G3DSA:3.40.50.1820 295 404 4.8E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS05790 1979c7550701a153f8e3d7289f837c0f 414 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 83 94 1.2E-8 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RM25_RS05790 1979c7550701a153f8e3d7289f837c0f 414 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 137 151 1.2E-8 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RM25_RS05790 1979c7550701a153f8e3d7289f837c0f 414 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 50 58 1.2E-8 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RM25_RS05790 1979c7550701a153f8e3d7289f837c0f 414 PANTHER PTHR10992 302 410 4.6E-79 T 22-04-2016 RM25_RS05790 1979c7550701a153f8e3d7289f837c0f 414 PANTHER PTHR10992 5 208 4.6E-79 T 22-04-2016 RM25_RS05790 1979c7550701a153f8e3d7289f837c0f 414 Pfam PF00561 alpha/beta hydrolase fold 49 177 6.6E-18 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RM25_RS05790 1979c7550701a153f8e3d7289f837c0f 414 SUPERFAMILY SSF53474 256 394 7.44E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS05790 1979c7550701a153f8e3d7289f837c0f 414 SUPERFAMILY SSF53474 44 167 7.44E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS05790 1979c7550701a153f8e3d7289f837c0f 414 PANTHER PTHR10992:SF749 302 410 4.6E-79 T 22-04-2016 RM25_RS05790 1979c7550701a153f8e3d7289f837c0f 414 PANTHER PTHR10992:SF749 5 208 4.6E-79 T 22-04-2016 RM25_RS03070 9cd5cc2306c1d4e392df8e11956b9ba9 352 PANTHER PTHR32196:SF19 13 339 1.5E-76 T 22-04-2016 RM25_RS03070 9cd5cc2306c1d4e392df8e11956b9ba9 352 PANTHER PTHR32196 13 339 1.5E-76 T 22-04-2016 RM25_RS03070 9cd5cc2306c1d4e392df8e11956b9ba9 352 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 314 9.1E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RM25_RS07985 8b2265b7907d92c42dba1f87bc133722 211 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 2.6E-66 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RM25_RS07985 8b2265b7907d92c42dba1f87bc133722 211 PANTHER PTHR10173:SF6 11 199 2.2E-83 T 22-04-2016 RM25_RS07985 8b2265b7907d92c42dba1f87bc133722 211 SUPERFAMILY SSF55068 17 207 1.1E-75 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RM25_RS07985 8b2265b7907d92c42dba1f87bc133722 211 PANTHER PTHR10173 11 199 2.2E-83 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RM25_RS07985 8b2265b7907d92c42dba1f87bc133722 211 Gene3D G3DSA:3.30.1060.10 42 199 1.9E-74 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RM25_RS07985 8b2265b7907d92c42dba1f87bc133722 211 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 46 199 7.3E-62 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RM25_RS07985 8b2265b7907d92c42dba1f87bc133722 211 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 44 205 37.703 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RM25_RS09730 b10d3764a5fbeefbb4027782c4028786 201 SUPERFAMILY SSF141571 27 199 9.81E-45 T 22-04-2016 RM25_RS09730 b10d3764a5fbeefbb4027782c4028786 201 PANTHER PTHR14136:SF0 30 167 9.3E-23 T 22-04-2016 RM25_RS09730 b10d3764a5fbeefbb4027782c4028786 201 PANTHER PTHR14136 30 167 9.3E-23 T 22-04-2016 RM25_RS09730 b10d3764a5fbeefbb4027782c4028786 201 Pfam PF13599 Pentapeptide repeats (9 copies) 32 95 2.9E-12 T 22-04-2016 IPR001646 Pentapeptide repeat RM25_RS09730 b10d3764a5fbeefbb4027782c4028786 201 Pfam PF13599 Pentapeptide repeats (9 copies) 103 167 1.7E-12 T 22-04-2016 IPR001646 Pentapeptide repeat RM25_RS01525 fd1fa743b68deb7a3a536df348a98e92 316 Gene3D G3DSA:1.20.1510.10 27 221 6.4E-55 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RM25_RS01525 fd1fa743b68deb7a3a536df348a98e92 316 SUPERFAMILY SSF161111 25 222 3.66E-53 T 22-04-2016 RM25_RS01525 fd1fa743b68deb7a3a536df348a98e92 316 Pfam PF01545 Cation efflux family 33 221 4.6E-46 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RM25_RS01525 fd1fa743b68deb7a3a536df348a98e92 316 SUPERFAMILY SSF160240 224 303 1.57E-11 T 22-04-2016 RM25_RS01525 fd1fa743b68deb7a3a536df348a98e92 316 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 27 304 1.4E-81 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RM25_RS01525 fd1fa743b68deb7a3a536df348a98e92 316 PANTHER PTHR11562 23 311 3.5E-99 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 Pfam PF00005 ABC transporter 340 473 1.9E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 Pfam PF00005 ABC transporter 21 190 7.2E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 PANTHER PTHR19211:SF7 1 562 0.0 T 22-04-2016 RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 559 2.3E-266 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 Gene3D G3DSA:3.40.50.300 345 514 1.7E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 SUPERFAMILY SSF52540 8 243 1.14E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 Pfam PF12848 ABC transporter 229 302 6.6E-12 T 22-04-2016 IPR032781 ABC-transporter extension domain RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 SUPERFAMILY SSF52540 327 514 3.52E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 Gene3D G3DSA:3.40.50.300 7 92 5.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 Gene3D G3DSA:3.40.50.300 125 275 5.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 PANTHER PTHR19211 1 562 0.0 T 22-04-2016 RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 SMART SM00382 348 518 6.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS03735 33639bd71c103622d2a2a5a5ebddf164 562 SMART SM00382 30 237 3.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS04220 83ca219d481e87aa80232583e37c80e0 361 Gene3D G3DSA:3.30.470.10 23 177 6.2E-69 T 22-04-2016 RM25_RS04220 83ca219d481e87aa80232583e37c80e0 361 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 47 360 4.1E-113 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 RM25_RS04220 83ca219d481e87aa80232583e37c80e0 361 Pfam PF01063 Amino-transferase class IV 73 316 8.0E-31 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RM25_RS04220 83ca219d481e87aa80232583e37c80e0 361 PIRSF PIRSF006468 4 361 2.0E-124 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 RM25_RS04220 83ca219d481e87aa80232583e37c80e0 361 PANTHER PTHR11825 24 359 6.5E-127 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RM25_RS04220 83ca219d481e87aa80232583e37c80e0 361 SUPERFAMILY SSF56752 20 357 1.83E-104 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RM25_RS04220 83ca219d481e87aa80232583e37c80e0 361 Gene3D G3DSA:3.20.10.10 178 347 5.4E-56 T 22-04-2016 RM25_RS04220 83ca219d481e87aa80232583e37c80e0 361 PANTHER PTHR11825:SF2 24 359 6.5E-127 T 22-04-2016 RM25_RS08145 e97132d43d7591ddcc03f5d7cb2af546 331 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 12 128 2.8E-40 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RM25_RS08145 e97132d43d7591ddcc03f5d7cb2af546 331 SUPERFAMILY SSF53271 77 313 1.55E-61 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS08145 e97132d43d7591ddcc03f5d7cb2af546 331 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 13 322 6.2E-115 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RM25_RS08145 e97132d43d7591ddcc03f5d7cb2af546 331 Gene3D G3DSA:3.40.50.2020 8 167 1.4E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS08145 e97132d43d7591ddcc03f5d7cb2af546 331 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 12 322 44.888 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RM25_RS08145 e97132d43d7591ddcc03f5d7cb2af546 331 Gene3D G3DSA:3.40.50.2020 168 290 7.1E-48 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS08145 e97132d43d7591ddcc03f5d7cb2af546 331 Pfam PF14572 Phosphoribosyl synthetase-associated domain 215 321 2.5E-22 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RM25_RS08145 e97132d43d7591ddcc03f5d7cb2af546 331 SMART SM01400 12 128 3.1E-67 T 22-04-2016 RM25_RS08145 e97132d43d7591ddcc03f5d7cb2af546 331 PANTHER PTHR10210 1 327 3.4E-168 T 22-04-2016 RM25_RS08145 e97132d43d7591ddcc03f5d7cb2af546 331 PANTHER PTHR10210:SF41 1 327 3.4E-168 T 22-04-2016 RM25_RS08145 e97132d43d7591ddcc03f5d7cb2af546 331 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 136 151 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 RM25_RS05340 908dcd92707390b714b5cb145711ed54 245 PANTHER PTHR23344 1 242 1.1E-46 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RM25_RS05340 908dcd92707390b714b5cb145711ed54 245 SUPERFAMILY SSF51695 2 238 9.42E-52 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RM25_RS05340 908dcd92707390b714b5cb145711ed54 245 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 3 233 3.0E-26 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RM25_RS05340 908dcd92707390b714b5cb145711ed54 245 Gene3D G3DSA:3.20.20.190 1 245 1.6E-59 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 Gene3D G3DSA:3.30.479.20 57 138 8.0E-11 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 Gene3D G3DSA:3.30.479.20 234 269 4.3E-21 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 Gene3D G3DSA:3.30.479.20 144 185 4.3E-21 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 Pfam PF00889 Elongation factor TS 67 269 1.5E-60 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 269 1.6E-72 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 Gene3D G3DSA:1.10.286.20 190 233 1.5E-19 T 22-04-2016 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 PANTHER PTHR11741 1 267 1.4E-91 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 Hamap MF_00050 Elongation factor Ts [tsf]. 1 270 61.268 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 SUPERFAMILY SSF54713 143 269 4.84E-38 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 SUPERFAMILY SSF54713 56 139 1.8E-12 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 SUPERFAMILY SSF46934 4 54 1.12E-15 T 22-04-2016 IPR009060 UBA-like GO:0005515 RM25_RS06890 547171712bbb6e32ef0e2e762df3006d 270 Gene3D G3DSA:1.10.8.10 1 54 4.1E-23 T 22-04-2016 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 SUPERFAMILY SSF53732 3 464 1.57E-159 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 Gene3D G3DSA:3.40.1060.10 166 281 3.2E-37 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PRINTS PR00415 Aconitase family signature 209 222 1.5E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PRINTS PR00415 Aconitase family signature 133 148 1.5E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PRINTS PR00415 Aconitase family signature 343 354 1.5E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PRINTS PR00415 Aconitase family signature 82 95 1.5E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PRINTS PR00415 Aconitase family signature 195 208 1.5E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PRINTS PR00415 Aconitase family signature 399 412 1.5E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PRINTS PR00415 Aconitase family signature 119 132 1.5E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PRINTS PR00415 Aconitase family signature 108 116 1.5E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PRINTS PR00415 Aconitase family signature 286 300 1.5E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PANTHER PTHR11670 327 460 5.2E-249 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PANTHER PTHR11670 4 307 5.2E-249 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 58.554 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PANTHER PTHR11670:SF38 327 460 5.2E-249 T 22-04-2016 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 PANTHER PTHR11670:SF38 4 307 5.2E-249 T 22-04-2016 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 Gene3D G3DSA:3.30.499.10 3 164 6.0E-21 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 Gene3D G3DSA:3.30.499.10 326 465 2.6E-58 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 4.8E-151 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04255 17f2366dae441f93e8802bba80b9b8e1 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 460 1.2E-224 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS01850 1a35a08e4be2df8ff96998c0d9e16804 225 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 4 203 2.7E-34 T 22-04-2016 RM25_RS01850 1a35a08e4be2df8ff96998c0d9e16804 225 PANTHER PTHR10099 4 221 6.5E-99 T 22-04-2016 RM25_RS01850 1a35a08e4be2df8ff96998c0d9e16804 225 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 4 219 2.4E-80 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01850 1a35a08e4be2df8ff96998c0d9e16804 225 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 3 219 38.669 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01850 1a35a08e4be2df8ff96998c0d9e16804 225 PIRSF PIRSF001586 1 224 1.2E-80 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01850 1a35a08e4be2df8ff96998c0d9e16804 225 Gene3D G3DSA:3.40.50.880 4 219 1.7E-39 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS01850 1a35a08e4be2df8ff96998c0d9e16804 225 SUPERFAMILY SSF52317 4 220 3.44E-68 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS01850 1a35a08e4be2df8ff96998c0d9e16804 225 SMART SM01211 3 221 4.2E-111 T 22-04-2016 RM25_RS06390 28618c80f5f4eaa5271fcde3556835dd 225 SUPERFAMILY SSF46785 5 80 5.17E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS06390 28618c80f5f4eaa5271fcde3556835dd 225 PIRSF PIRSF019345 2 208 8.0E-50 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RM25_RS06390 28618c80f5f4eaa5271fcde3556835dd 225 PANTHER PTHR34298 1 176 7.5E-49 T 22-04-2016 RM25_RS06390 28618c80f5f4eaa5271fcde3556835dd 225 PANTHER PTHR34298:SF2 1 176 7.5E-49 T 22-04-2016 RM25_RS06390 28618c80f5f4eaa5271fcde3556835dd 225 Gene3D G3DSA:1.10.10.10 6 79 1.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS06390 28618c80f5f4eaa5271fcde3556835dd 225 Pfam PF04079 Segregation and condensation complex subunit ScpB 13 168 3.6E-46 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RM25_RS06390 28618c80f5f4eaa5271fcde3556835dd 225 SUPERFAMILY SSF46785 89 160 5.8E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS06390 28618c80f5f4eaa5271fcde3556835dd 225 Gene3D G3DSA:1.10.10.10 88 160 1.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS06455 50922f8bb232dabef613dd2064debb6b 343 SUPERFAMILY SSF56784 14 253 9.14E-49 T 22-04-2016 IPR023214 HAD-like domain RM25_RS06455 50922f8bb232dabef613dd2064debb6b 343 PANTHER PTHR19288 9 279 1.4E-67 T 22-04-2016 RM25_RS06455 50922f8bb232dabef613dd2064debb6b 343 Pfam PF13242 HAD-hyrolase-like 195 266 6.0E-11 T 22-04-2016 RM25_RS06455 50922f8bb232dabef613dd2064debb6b 343 PANTHER PTHR19288:SF3 9 279 1.4E-67 T 22-04-2016 RM25_RS06455 50922f8bb232dabef613dd2064debb6b 343 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 19 242 3.2E-33 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA RM25_RS06455 50922f8bb232dabef613dd2064debb6b 343 Gene3D G3DSA:3.40.50.1000 11 87 1.0E-33 T 22-04-2016 IPR023214 HAD-like domain RM25_RS06455 50922f8bb232dabef613dd2064debb6b 343 Gene3D G3DSA:3.40.50.1000 194 269 1.0E-33 T 22-04-2016 IPR023214 HAD-like domain RM25_RS06455 50922f8bb232dabef613dd2064debb6b 343 Gene3D G3DSA:3.40.50.10410 88 193 1.5E-22 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain RM25_RS06455 50922f8bb232dabef613dd2064debb6b 343 Pfam PF13344 Haloacid dehalogenase-like hydrolase 19 119 5.1E-24 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA RM25_RS07170 a57f4bcfc1da48ed4df1308f48d41371 488 SUPERFAMILY SSF53720 13 482 5.11E-161 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RM25_RS07170 a57f4bcfc1da48ed4df1308f48d41371 488 Pfam PF00171 Aldehyde dehydrogenase family 25 478 1.4E-160 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RM25_RS07170 a57f4bcfc1da48ed4df1308f48d41371 488 PANTHER PTHR11699 1 483 3.1E-217 T 22-04-2016 RM25_RS07170 a57f4bcfc1da48ed4df1308f48d41371 488 Gene3D G3DSA:3.40.309.10 271 456 2.3E-65 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RM25_RS07170 a57f4bcfc1da48ed4df1308f48d41371 488 PANTHER PTHR11699:SF49 1 483 3.1E-217 T 22-04-2016 RM25_RS07170 a57f4bcfc1da48ed4df1308f48d41371 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RM25_RS07170 a57f4bcfc1da48ed4df1308f48d41371 488 Gene3D G3DSA:3.40.605.10 15 270 4.1E-90 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RM25_RS05780 72e6d1e21494e381de55de2de3800636 381 PANTHER PTHR22976 3 321 3.0E-128 T 22-04-2016 RM25_RS05780 72e6d1e21494e381de55de2de3800636 381 Hamap MF_01694 Biotin synthase [bioB]. 14 322 37.822 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RM25_RS05780 72e6d1e21494e381de55de2de3800636 381 SMART SM00729 54 263 8.9E-36 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RM25_RS05780 72e6d1e21494e381de55de2de3800636 381 SUPERFAMILY SSF102114 14 322 2.35E-73 T 22-04-2016 RM25_RS05780 72e6d1e21494e381de55de2de3800636 381 PANTHER PTHR22976:SF1 3 321 3.0E-128 T 22-04-2016 RM25_RS05780 72e6d1e21494e381de55de2de3800636 381 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 231 319 1.2E-12 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RM25_RS05780 72e6d1e21494e381de55de2de3800636 381 TIGRFAM TIGR00433 bioB: biotin synthase 27 319 5.7E-108 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RM25_RS05780 72e6d1e21494e381de55de2de3800636 381 PIRSF PIRSF001619 1 326 1.3E-104 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RM25_RS05780 72e6d1e21494e381de55de2de3800636 381 Pfam PF04055 Radical SAM superfamily 63 219 4.9E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RM25_RS05780 72e6d1e21494e381de55de2de3800636 381 SMART SM00876 231 321 1.5E-25 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RM25_RS05780 72e6d1e21494e381de55de2de3800636 381 Gene3D G3DSA:3.20.20.70 15 321 1.8E-84 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS11130 a611fcd1fde2422bb1bdb4bfd1136407 417 Gene3D G3DSA:1.20.1250.20 219 394 6.5E-24 T 22-04-2016 RM25_RS11130 a611fcd1fde2422bb1bdb4bfd1136407 417 Gene3D G3DSA:1.20.1250.20 16 199 8.4E-33 T 22-04-2016 RM25_RS11130 a611fcd1fde2422bb1bdb4bfd1136407 417 SUPERFAMILY SSF103473 16 395 1.11E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS11130 a611fcd1fde2422bb1bdb4bfd1136407 417 PRINTS PR01035 Tetracycline resistance protein signature 142 164 8.7E-14 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RM25_RS11130 a611fcd1fde2422bb1bdb4bfd1136407 417 PRINTS PR01035 Tetracycline resistance protein signature 170 190 8.7E-14 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RM25_RS11130 a611fcd1fde2422bb1bdb4bfd1136407 417 PRINTS PR01035 Tetracycline resistance protein signature 308 328 8.7E-14 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RM25_RS11130 a611fcd1fde2422bb1bdb4bfd1136407 417 PRINTS PR01035 Tetracycline resistance protein signature 27 43 8.7E-14 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RM25_RS11130 a611fcd1fde2422bb1bdb4bfd1136407 417 PRINTS PR01035 Tetracycline resistance protein signature 344 367 8.7E-14 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RM25_RS11130 a611fcd1fde2422bb1bdb4bfd1136407 417 PANTHER PTHR23506 18 391 6.7E-36 T 22-04-2016 RM25_RS11130 a611fcd1fde2422bb1bdb4bfd1136407 417 Pfam PF07690 Major Facilitator Superfamily 22 219 8.4E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS11130 a611fcd1fde2422bb1bdb4bfd1136407 417 Pfam PF07690 Major Facilitator Superfamily 225 397 4.0E-18 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS05590 4aa306f5710622e2bff110f4f23a91eb 72 SUPERFAMILY SSF81333 13 71 1.96E-14 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RM25_RS05590 4aa306f5710622e2bff110f4f23a91eb 72 Hamap MF_01396 ATP synthase subunit c [atpH]. 4 72 11.774 T 22-04-2016 RM25_RS05590 4aa306f5710622e2bff110f4f23a91eb 72 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 18 71 3.2E-13 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RM25_RS05590 4aa306f5710622e2bff110f4f23a91eb 72 Pfam PF00137 ATP synthase subunit C 15 71 1.6E-11 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RM25_RS05590 4aa306f5710622e2bff110f4f23a91eb 72 Gene3D G3DSA:1.20.20.10 12 71 7.6E-20 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RM25_RS05590 4aa306f5710622e2bff110f4f23a91eb 72 ProSitePatterns PS00605 ATP synthase c subunit signature. 38 59 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RM25_RS05590 4aa306f5710622e2bff110f4f23a91eb 72 PRINTS PR00124 ATP synthase C subunit signature 10 29 3.0E-15 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RM25_RS05590 4aa306f5710622e2bff110f4f23a91eb 72 PRINTS PR00124 ATP synthase C subunit signature 31 46 3.0E-15 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RM25_RS05590 4aa306f5710622e2bff110f4f23a91eb 72 PRINTS PR00124 ATP synthase C subunit signature 48 72 3.0E-15 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RM25_RS06925 b4475b26ad2a0740b5076f7c2083a5a3 347 PANTHER PTHR18640 10 335 6.7E-76 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter RM25_RS06925 b4475b26ad2a0740b5076f7c2083a5a3 347 PIRSF PIRSF026166 9 338 6.7E-112 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter RM25_RS06925 b4475b26ad2a0740b5076f7c2083a5a3 347 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 20 327 1.0E-84 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter RM25_RS12070 ec8db210095e404d25a9b14da37513c5 174 Pfam PF00589 Phage integrase family 1 154 4.3E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS12070 ec8db210095e404d25a9b14da37513c5 174 SUPERFAMILY SSF56349 1 160 9.71E-25 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RM25_RS12070 ec8db210095e404d25a9b14da37513c5 174 PANTHER PTHR30349:SF20 1 167 5.7E-16 T 22-04-2016 RM25_RS12070 ec8db210095e404d25a9b14da37513c5 174 Gene3D G3DSA:1.10.443.10 1 159 9.7E-25 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS12070 ec8db210095e404d25a9b14da37513c5 174 PANTHER PTHR30349 1 167 5.7E-16 T 22-04-2016 RM25_RS11705 5410e899a8300066f54497c9c351bbd5 298 SUPERFAMILY SSF46785 4 82 4.73E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS11705 5410e899a8300066f54497c9c351bbd5 298 Gene3D G3DSA:1.10.10.10 5 64 1.8E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS01885 76ea393ed0dcd290f61fc957336f06d3 344 PANTHER PTHR10948 1 344 1.9E-76 T 22-04-2016 RM25_RS01885 76ea393ed0dcd290f61fc957336f06d3 344 SUPERFAMILY SSF53098 186 333 3.41E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01885 76ea393ed0dcd290f61fc957336f06d3 344 Gene3D G3DSA:3.30.420.10 189 326 3.0E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01885 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF13936 Helix-turn-helix domain 6 45 9.7E-15 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RM25_RS01885 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF00665 Integrase core domain 185 291 5.3E-8 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS09315 76ea393ed0dcd290f61fc957336f06d3 344 PANTHER PTHR10948 1 344 1.9E-76 T 22-04-2016 RM25_RS09315 76ea393ed0dcd290f61fc957336f06d3 344 SUPERFAMILY SSF53098 186 333 3.41E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS09315 76ea393ed0dcd290f61fc957336f06d3 344 Gene3D G3DSA:3.30.420.10 189 326 3.0E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS09315 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF13936 Helix-turn-helix domain 6 45 9.7E-15 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RM25_RS09315 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF00665 Integrase core domain 185 291 5.3E-8 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS01275 76ea393ed0dcd290f61fc957336f06d3 344 PANTHER PTHR10948 1 344 1.9E-76 T 22-04-2016 RM25_RS01275 76ea393ed0dcd290f61fc957336f06d3 344 SUPERFAMILY SSF53098 186 333 3.41E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01275 76ea393ed0dcd290f61fc957336f06d3 344 Gene3D G3DSA:3.30.420.10 189 326 3.0E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01275 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF13936 Helix-turn-helix domain 6 45 9.7E-15 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RM25_RS01275 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF00665 Integrase core domain 185 291 5.3E-8 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS00470 76ea393ed0dcd290f61fc957336f06d3 344 PANTHER PTHR10948 1 344 1.9E-76 T 22-04-2016 RM25_RS00470 76ea393ed0dcd290f61fc957336f06d3 344 SUPERFAMILY SSF53098 186 333 3.41E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS00470 76ea393ed0dcd290f61fc957336f06d3 344 Gene3D G3DSA:3.30.420.10 189 326 3.0E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS00470 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF13936 Helix-turn-helix domain 6 45 9.7E-15 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RM25_RS00470 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF00665 Integrase core domain 185 291 5.3E-8 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS00055 76ea393ed0dcd290f61fc957336f06d3 344 PANTHER PTHR10948 1 344 1.9E-76 T 22-04-2016 RM25_RS00055 76ea393ed0dcd290f61fc957336f06d3 344 SUPERFAMILY SSF53098 186 333 3.41E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS00055 76ea393ed0dcd290f61fc957336f06d3 344 Gene3D G3DSA:3.30.420.10 189 326 3.0E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS00055 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF13936 Helix-turn-helix domain 6 45 9.7E-15 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RM25_RS00055 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF00665 Integrase core domain 185 291 5.3E-8 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS03130 76ea393ed0dcd290f61fc957336f06d3 344 PANTHER PTHR10948 1 344 1.9E-76 T 22-04-2016 RM25_RS03130 76ea393ed0dcd290f61fc957336f06d3 344 SUPERFAMILY SSF53098 186 333 3.41E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03130 76ea393ed0dcd290f61fc957336f06d3 344 Gene3D G3DSA:3.30.420.10 189 326 3.0E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03130 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF13936 Helix-turn-helix domain 6 45 9.7E-15 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RM25_RS03130 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF00665 Integrase core domain 185 291 5.3E-8 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS01305 76ea393ed0dcd290f61fc957336f06d3 344 PANTHER PTHR10948 1 344 1.9E-76 T 22-04-2016 RM25_RS01305 76ea393ed0dcd290f61fc957336f06d3 344 SUPERFAMILY SSF53098 186 333 3.41E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01305 76ea393ed0dcd290f61fc957336f06d3 344 Gene3D G3DSA:3.30.420.10 189 326 3.0E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01305 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF13936 Helix-turn-helix domain 6 45 9.7E-15 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RM25_RS01305 76ea393ed0dcd290f61fc957336f06d3 344 Pfam PF00665 Integrase core domain 185 291 5.3E-8 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 PANTHER PTHR11946:SF5 38 119 4.9E-149 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 PANTHER PTHR11946:SF5 140 783 4.9E-149 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 PRINTS PR00986 Valyl-tRNA synthetase signature 552 570 2.2E-19 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 PRINTS PR00986 Valyl-tRNA synthetase signature 63 74 2.2E-19 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 PRINTS PR00986 Valyl-tRNA synthetase signature 274 291 2.2E-19 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 PRINTS PR00986 Valyl-tRNA synthetase signature 521 542 2.2E-19 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 PRINTS PR00986 Valyl-tRNA synthetase signature 401 414 2.2E-19 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 Gene3D G3DSA:3.90.740.10 243 385 2.2E-27 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 SUPERFAMILY SSF52374 396 643 4.77E-104 T 22-04-2016 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 SUPERFAMILY SSF52374 34 237 4.77E-104 T 22-04-2016 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 PANTHER PTHR11946 38 119 4.9E-149 T 22-04-2016 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 PANTHER PTHR11946 140 783 4.9E-149 T 22-04-2016 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 Gene3D G3DSA:3.40.50.620 31 233 1.7E-102 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 Gene3D G3DSA:3.40.50.620 399 631 1.7E-102 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 SUPERFAMILY SSF50677 238 386 6.93E-32 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 Hamap MF_02005 Valine--tRNA ligase [valS]. 28 851 27.38 T 22-04-2016 IPR022874 Valine-tRNA ligase, type 2 GO:0004832 KEGG: 00970+6.1.1.9 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 Gene3D G3DSA:1.10.730.10 638 806 1.1E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 70 81 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 Pfam PF08264 Anticodon-binding domain of tRNA 684 818 5.3E-25 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 SUPERFAMILY SSF47323 652 846 8.41E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS03890 c78f2a4682194304c80596cb4a58da7c 875 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 41 634 2.0E-91 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS10510 9c4e3863c288dcd534f1724a254d01bf 572 Gene3D G3DSA:3.30.1180.20 183 334 8.8E-46 T 22-04-2016 RM25_RS10510 9c4e3863c288dcd534f1724a254d01bf 572 Gene3D G3DSA:3.40.50.10440 13 181 1.9E-54 T 22-04-2016 RM25_RS10510 9c4e3863c288dcd534f1724a254d01bf 572 SUPERFAMILY SSF101473 363 567 7.98E-45 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 RM25_RS10510 9c4e3863c288dcd534f1724a254d01bf 572 PANTHER PTHR28629 1 571 1.1E-170 T 22-04-2016 RM25_RS10510 9c4e3863c288dcd534f1724a254d01bf 572 SMART SM01120 391 567 2.6E-53 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 RM25_RS10510 9c4e3863c288dcd534f1724a254d01bf 572 Pfam PF02733 Dak1 domain 18 329 3.2E-104 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 RM25_RS10510 9c4e3863c288dcd534f1724a254d01bf 572 Pfam PF02734 DAK2 domain 392 566 1.3E-44 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 RM25_RS10510 9c4e3863c288dcd534f1724a254d01bf 572 SUPERFAMILY SSF82549 12 333 6.54E-99 T 22-04-2016 RM25_RS08910 2131dc6e9119cf522d291ca0c1917ee6 613 PANTHER PTHR21000 410 611 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS08910 2131dc6e9119cf522d291ca0c1917ee6 613 PANTHER PTHR21000 1 374 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS08910 2131dc6e9119cf522d291ca0c1917ee6 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 513 524 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS08910 2131dc6e9119cf522d291ca0c1917ee6 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 611 1.2E-239 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS08910 2131dc6e9119cf522d291ca0c1917ee6 613 PANTHER PTHR21000:SF11 410 611 0.0 T 22-04-2016 RM25_RS08910 2131dc6e9119cf522d291ca0c1917ee6 613 PANTHER PTHR21000:SF11 1 374 0.0 T 22-04-2016 RM25_RS08910 2131dc6e9119cf522d291ca0c1917ee6 613 SUPERFAMILY SSF143975 3 424 7.45E-129 T 22-04-2016 RM25_RS08910 2131dc6e9119cf522d291ca0c1917ee6 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 611 44.164 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS08910 2131dc6e9119cf522d291ca0c1917ee6 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS08910 2131dc6e9119cf522d291ca0c1917ee6 613 Pfam PF00920 Dehydratase family 34 608 6.6E-210 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS08910 2131dc6e9119cf522d291ca0c1917ee6 613 SUPERFAMILY SSF52016 425 610 6.75E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RM25_RS02115 5e8e15936c97c83998bdd99d5dc74088 318 SUPERFAMILY SSF53067 115 295 8.91E-34 T 22-04-2016 RM25_RS02115 5e8e15936c97c83998bdd99d5dc74088 318 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 52 271 9.5E-12 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type RM25_RS02115 5e8e15936c97c83998bdd99d5dc74088 318 PANTHER PTHR12862 62 277 4.2E-31 T 22-04-2016 RM25_RS09200 bef650192d5ab79dc5ec4930a2e55cf1 238 Pfam PF00498 FHA domain 159 226 3.8E-17 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RM25_RS09200 bef650192d5ab79dc5ec4930a2e55cf1 238 Pfam PF12401 Protein of unknown function (DUF2662) 4 117 2.2E-38 T 22-04-2016 IPR022128 Protein of unknown function DUF3662 RM25_RS09200 bef650192d5ab79dc5ec4930a2e55cf1 238 PANTHER PTHR15715 108 226 3.5E-12 T 22-04-2016 RM25_RS09200 bef650192d5ab79dc5ec4930a2e55cf1 238 SMART SM00240 157 212 1.5E-12 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RM25_RS09200 bef650192d5ab79dc5ec4930a2e55cf1 238 SUPERFAMILY SSF49879 133 233 2.68E-24 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 RM25_RS09200 bef650192d5ab79dc5ec4930a2e55cf1 238 Gene3D G3DSA:2.60.200.20 143 234 5.7E-24 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RM25_RS08835 63d86536662a33882bcfd8e86516ea47 123 PANTHER PTHR18866 57 122 5.1E-20 T 22-04-2016 RM25_RS08835 63d86536662a33882bcfd8e86516ea47 123 Gene3D G3DSA:2.40.50.100 53 122 2.4E-26 T 22-04-2016 RM25_RS08835 63d86536662a33882bcfd8e86516ea47 123 PANTHER PTHR18866:SF103 57 122 5.1E-20 T 22-04-2016 RM25_RS08835 63d86536662a33882bcfd8e86516ea47 123 Pfam PF00364 Biotin-requiring enzyme 56 122 5.0E-20 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RM25_RS08835 63d86536662a33882bcfd8e86516ea47 123 SUPERFAMILY SSF51230 51 122 2.62E-23 T 22-04-2016 IPR011053 Single hybrid motif RM25_RS08835 63d86536662a33882bcfd8e86516ea47 123 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 79 96 - T 22-04-2016 IPR001882 Biotin-binding site RM25_RS06020 e0ace473addd46191829efb12994109f 249 SUPERFAMILY SSF56317 1 213 8.5E-49 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RM25_RS06020 e0ace473addd46191829efb12994109f 249 Pfam PF00795 Carbon-nitrogen hydrolase 2 211 4.3E-24 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RM25_RS06020 e0ace473addd46191829efb12994109f 249 Gene3D G3DSA:3.60.110.10 2 216 2.2E-48 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RM25_RS06020 e0ace473addd46191829efb12994109f 249 PANTHER PTHR23088 1 212 6.8E-49 T 22-04-2016 RM25_RS10965 6989315c792503a4748144437202c64d 283 PANTHER PTHR11364:SF0 1 283 6.9E-70 T 22-04-2016 RM25_RS10965 6989315c792503a4748144437202c64d 283 SUPERFAMILY SSF52821 10 150 9.56E-34 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS10965 6989315c792503a4748144437202c64d 283 SUPERFAMILY SSF52821 171 283 8.91E-30 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS10965 6989315c792503a4748144437202c64d 283 PANTHER PTHR11364 1 283 6.9E-70 T 22-04-2016 RM25_RS10965 6989315c792503a4748144437202c64d 283 Gene3D G3DSA:3.40.250.10 10 149 1.4E-39 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS10965 6989315c792503a4748144437202c64d 283 Pfam PF00581 Rhodanese-like domain 20 140 1.4E-14 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS10965 6989315c792503a4748144437202c64d 283 Pfam PF00581 Rhodanese-like domain 169 274 2.0E-10 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS10965 6989315c792503a4748144437202c64d 283 SMART SM00450 16 143 3.8E-17 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS10965 6989315c792503a4748144437202c64d 283 SMART SM00450 164 278 4.3E-12 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS10965 6989315c792503a4748144437202c64d 283 Gene3D G3DSA:3.40.250.10 171 283 1.7E-31 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS06855 75515a243ca4399c25968b3d90016095 280 Gene3D G3DSA:3.40.630.30 208 275 2.8E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS06855 75515a243ca4399c25968b3d90016095 280 Gene3D G3DSA:3.40.630.30 4 65 2.8E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS06855 75515a243ca4399c25968b3d90016095 280 Pfam PF00583 Acetyltransferase (GNAT) family 208 270 3.6E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS06855 75515a243ca4399c25968b3d90016095 280 SUPERFAMILY SSF55729 4 275 1.51E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS06855 75515a243ca4399c25968b3d90016095 280 PANTHER PTHR23091 112 276 5.4E-14 T 22-04-2016 RM25_RS06855 75515a243ca4399c25968b3d90016095 280 PIRSF PIRSF021603 1 280 2.2E-90 T 22-04-2016 IPR016794 Uncharacterised conserved protein UCP21603, acetyltransferase-like RM25_RS06855 75515a243ca4399c25968b3d90016095 280 Pfam PF13312 Domain of unknown function (DUF4081) 47 150 2.0E-31 T 22-04-2016 IPR025289 Domain of unknown function DUF4081 RM25_RS06855 75515a243ca4399c25968b3d90016095 280 PANTHER PTHR23091:SF122 112 276 5.4E-14 T 22-04-2016 RM25_RS10205 98441d9d959ee27228e68936fde283a2 412 Pfam PF01266 FAD dependent oxidoreductase 1 387 2.9E-48 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RM25_RS10205 98441d9d959ee27228e68936fde283a2 412 Gene3D G3DSA:3.50.50.60 1 52 3.8E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS10205 98441d9d959ee27228e68936fde283a2 412 Gene3D G3DSA:3.50.50.60 105 115 3.8E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS10205 98441d9d959ee27228e68936fde283a2 412 Gene3D G3DSA:3.50.50.60 351 409 3.8E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS10205 98441d9d959ee27228e68936fde283a2 412 Gene3D G3DSA:3.50.50.60 179 260 3.8E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS10205 98441d9d959ee27228e68936fde283a2 412 SUPERFAMILY SSF51905 351 408 7.12E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS10205 98441d9d959ee27228e68936fde283a2 412 SUPERFAMILY SSF51905 110 261 7.12E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS10205 98441d9d959ee27228e68936fde283a2 412 SUPERFAMILY SSF51905 1 48 7.12E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS10205 98441d9d959ee27228e68936fde283a2 412 PANTHER PTHR13847 1 54 6.6E-49 T 22-04-2016 RM25_RS10205 98441d9d959ee27228e68936fde283a2 412 PANTHER PTHR13847 104 409 6.6E-49 T 22-04-2016 RM25_RS11260 bd9ce10680cfed91fd6c3146c76524bf 286 PANTHER PTHR22911 4 281 2.1E-41 T 22-04-2016 RM25_RS11260 bd9ce10680cfed91fd6c3146c76524bf 286 Pfam PF00892 EamA-like transporter family 7 137 1.6E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RM25_RS11260 bd9ce10680cfed91fd6c3146c76524bf 286 SUPERFAMILY SSF103481 188 285 1.44E-10 T 22-04-2016 RM25_RS11260 bd9ce10680cfed91fd6c3146c76524bf 286 SUPERFAMILY SSF103481 42 139 6.21E-13 T 22-04-2016 RM25_RS11260 bd9ce10680cfed91fd6c3146c76524bf 286 PANTHER PTHR22911:SF61 4 281 2.1E-41 T 22-04-2016 RM25_RS01865 35bb1db12787212e2d5ab80ac996ad5c 427 SUPERFAMILY SSF103473 24 422 9.42E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS01865 35bb1db12787212e2d5ab80ac996ad5c 427 PANTHER PTHR23501 53 423 1.6E-13 T 22-04-2016 RM25_RS01865 35bb1db12787212e2d5ab80ac996ad5c 427 Pfam PF07690 Major Facilitator Superfamily 28 268 9.9E-18 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS01865 35bb1db12787212e2d5ab80ac996ad5c 427 Gene3D G3DSA:1.20.1250.20 233 423 6.2E-25 T 22-04-2016 RM25_RS01865 35bb1db12787212e2d5ab80ac996ad5c 427 Gene3D G3DSA:1.20.1250.20 25 211 1.3E-21 T 22-04-2016 RM25_RS08945 84e74fb62d31bae10bc7be74dde461ac 332 SUPERFAMILY SSF53613 13 318 4.37E-69 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS08945 84e74fb62d31bae10bc7be74dde461ac 332 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 12 317 2.6E-111 T 22-04-2016 IPR030830 5-dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92|UniPathway: UPA00076 RM25_RS08945 84e74fb62d31bae10bc7be74dde461ac 332 Gene3D G3DSA:3.40.1190.20 9 322 7.8E-88 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS08945 84e74fb62d31bae10bc7be74dde461ac 332 PANTHER PTHR10584:SF194 1 314 8.9E-105 T 22-04-2016 RM25_RS08945 84e74fb62d31bae10bc7be74dde461ac 332 Pfam PF00294 pfkB family carbohydrate kinase 14 310 9.0E-47 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RM25_RS08945 84e74fb62d31bae10bc7be74dde461ac 332 PANTHER PTHR10584 1 314 8.9E-105 T 22-04-2016 RM25_RS01845 3dbcf83c35760f4e70621657894f8391 81 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 78 1.1E-24 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01845 3dbcf83c35760f4e70621657894f8391 81 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 18.61 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01845 3dbcf83c35760f4e70621657894f8391 81 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 4 79 1.7E-15 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01845 3dbcf83c35760f4e70621657894f8391 81 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 11 80 1.0E-19 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01845 3dbcf83c35760f4e70621657894f8391 81 SUPERFAMILY SSF82697 1 80 1.13E-23 T 22-04-2016 RM25_RS01845 3dbcf83c35760f4e70621657894f8391 81 PANTHER PTHR34696 1 80 2.1E-26 T 22-04-2016 RM25_RS01845 3dbcf83c35760f4e70621657894f8391 81 Gene3D G3DSA:3.30.1280.10 1 80 3.7E-30 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS08255 8015dfb96bee9f88bbce2429da534bd0 479 ProSitePatterns PS00216 Sugar transport proteins signature 1. 330 346 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS08255 8015dfb96bee9f88bbce2429da534bd0 479 SUPERFAMILY SSF103473 23 461 2.22E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS08255 8015dfb96bee9f88bbce2429da534bd0 479 ProSitePatterns PS00217 Sugar transport proteins signature 2. 145 170 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS08255 8015dfb96bee9f88bbce2429da534bd0 479 PANTHER PTHR23508:SF17 26 478 2.4E-161 T 22-04-2016 RM25_RS08255 8015dfb96bee9f88bbce2429da534bd0 479 Gene3D G3DSA:1.20.1250.20 34 244 3.2E-26 T 22-04-2016 RM25_RS08255 8015dfb96bee9f88bbce2429da534bd0 479 Gene3D G3DSA:1.20.1250.20 273 458 5.7E-22 T 22-04-2016 RM25_RS08255 8015dfb96bee9f88bbce2429da534bd0 479 Pfam PF00083 Sugar (and other) transporter 39 463 2.6E-39 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RM25_RS08255 8015dfb96bee9f88bbce2429da534bd0 479 PANTHER PTHR23508 26 478 2.4E-161 T 22-04-2016 RM25_RS09935 aee1bdc34b48d83ba672ae7602562bc3 306 SUPERFAMILY SSF53098 128 293 5.56E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS09935 aee1bdc34b48d83ba672ae7602562bc3 306 Gene3D G3DSA:3.30.420.10 128 287 1.5E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS09935 aee1bdc34b48d83ba672ae7602562bc3 306 Pfam PF13276 HTH-like domain 46 109 6.3E-13 T 22-04-2016 IPR025948 HTH-like domain RM25_RS09935 aee1bdc34b48d83ba672ae7602562bc3 306 PANTHER PTHR32552 4 295 1.5E-44 T 22-04-2016 RM25_RS09935 aee1bdc34b48d83ba672ae7602562bc3 306 Pfam PF00665 Integrase core domain 134 248 8.9E-28 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS05465 aee1bdc34b48d83ba672ae7602562bc3 306 SUPERFAMILY SSF53098 128 293 5.56E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS05465 aee1bdc34b48d83ba672ae7602562bc3 306 Gene3D G3DSA:3.30.420.10 128 287 1.5E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS05465 aee1bdc34b48d83ba672ae7602562bc3 306 Pfam PF13276 HTH-like domain 46 109 6.3E-13 T 22-04-2016 IPR025948 HTH-like domain RM25_RS05465 aee1bdc34b48d83ba672ae7602562bc3 306 PANTHER PTHR32552 4 295 1.5E-44 T 22-04-2016 RM25_RS05465 aee1bdc34b48d83ba672ae7602562bc3 306 Pfam PF00665 Integrase core domain 134 248 8.9E-28 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS11685 0530642deac5b73fefb5166878f3295b 230 Gene3D G3DSA:1.10.357.10 142 229 4.7E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS11685 0530642deac5b73fefb5166878f3295b 230 Gene3D G3DSA:1.10.357.10 4 109 4.7E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS11685 0530642deac5b73fefb5166878f3295b 230 SUPERFAMILY SSF46689 5 67 2.05E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS11685 0530642deac5b73fefb5166878f3295b 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.6E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS11685 0530642deac5b73fefb5166878f3295b 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.6E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS11685 0530642deac5b73fefb5166878f3295b 230 PANTHER PTHR30055 1 112 4.3E-15 T 22-04-2016 RM25_RS11685 0530642deac5b73fefb5166878f3295b 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 3.4E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS05165 ea3efc4a8b5ed07da00ccdc3023bd617 122 Gene3D G3DSA:3.90.940.10 18 103 5.2E-34 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS05165 ea3efc4a8b5ed07da00ccdc3023bd617 122 PANTHER PTHR34476 19 119 6.1E-23 T 22-04-2016 RM25_RS05165 ea3efc4a8b5ed07da00ccdc3023bd617 122 SMART SM01409 25 89 3.2E-15 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS05165 ea3efc4a8b5ed07da00ccdc3023bd617 122 Pfam PF01192 RNA polymerase Rpb6 25 88 2.0E-14 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS05165 ea3efc4a8b5ed07da00ccdc3023bd617 122 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 19 88 4.5E-22 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS05165 ea3efc4a8b5ed07da00ccdc3023bd617 122 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 18 90 15.383 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS05165 ea3efc4a8b5ed07da00ccdc3023bd617 122 SUPERFAMILY SSF63562 18 96 2.27E-24 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS11980 ca791dfa69c00f2e8b1051b1d872aefa 511 Pfam PF00395 S-layer homology domain 331 378 0.0028 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS11980 ca791dfa69c00f2e8b1051b1d872aefa 511 Pfam PF00395 S-layer homology domain 459 502 3.8E-8 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS11980 ca791dfa69c00f2e8b1051b1d872aefa 511 Pfam PF00395 S-layer homology domain 397 440 8.5E-13 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS11980 ca791dfa69c00f2e8b1051b1d872aefa 511 Gene3D G3DSA:2.60.40.10 227 326 1.1E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 Pfam PF00072 Response regulator receiver domain 4 115 3.4E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 SUPERFAMILY SSF46894 144 216 5.1E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 SUPERFAMILY SSF52172 1 130 4.41E-33 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 PANTHER PTHR26402:SF564 2 216 3.5E-98 T 22-04-2016 RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.0E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.0E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.0E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 SMART SM00448 2 114 5.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 PANTHER PTHR26402 2 216 3.5E-98 T 22-04-2016 RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 Gene3D G3DSA:1.10.10.10 122 216 7.3E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 Gene3D G3DSA:3.40.50.2300 1 121 1.6E-37 T 22-04-2016 RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 1.2E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS07110 08aa73f17a99a49bf7fc76ae967f5dc1 217 SMART SM00421 153 210 1.9E-28 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS07020 cd55f84a1d8dfb294a0ea952f3ed5746 206 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 13 197 34.205 T 22-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 RM25_RS07020 cd55f84a1d8dfb294a0ea952f3ed5746 206 PANTHER PTHR31559 2 200 9.1E-68 T 22-04-2016 RM25_RS07020 cd55f84a1d8dfb294a0ea952f3ed5746 206 Pfam PF01174 SNO glutamine amidotransferase family 15 198 5.8E-51 T 22-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 RM25_RS07020 cd55f84a1d8dfb294a0ea952f3ed5746 206 SUPERFAMILY SSF52317 12 196 9.17E-42 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS07020 cd55f84a1d8dfb294a0ea952f3ed5746 206 Gene3D G3DSA:3.40.50.880 11 201 5.0E-66 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS07020 cd55f84a1d8dfb294a0ea952f3ed5746 206 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 13 195 7.6E-63 T 22-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 RM25_RS07020 cd55f84a1d8dfb294a0ea952f3ed5746 206 PIRSF PIRSF005639 8 202 7.9E-61 T 22-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 RM25_RS07020 cd55f84a1d8dfb294a0ea952f3ed5746 206 PANTHER PTHR31559:SF0 2 200 9.1E-68 T 22-04-2016 RM25_RS07020 cd55f84a1d8dfb294a0ea952f3ed5746 206 ProSitePatterns PS01236 PdxT/SNO family family signature. 50 60 - T 22-04-2016 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 SUPERFAMILY SSF54211 4 207 1.14E-55 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 Gene3D G3DSA:3.30.70.890 216 384 6.8E-59 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 Pfam PF10509 Galactokinase galactose-binding signature 10 59 4.1E-23 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 SUPERFAMILY SSF55060 212 382 6.37E-50 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 Pfam PF00288 GHMP kinases N terminal domain 114 183 2.1E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 PRINTS PR00473 Galactokinase signature 111 129 6.9E-22 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 PRINTS PR00473 Galactokinase signature 272 286 6.9E-22 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 PRINTS PR00473 Galactokinase signature 28 46 6.9E-22 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 PRINTS PR00473 Galactokinase signature 91 102 6.9E-22 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 PANTHER PTHR10457 8 393 5.4E-104 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 120 131 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 PIRSF PIRSF000530 1 391 2.1E-115 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 PRINTS PR00959 Mevalonate kinase family signature 335 352 1.4E-36 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 PRINTS PR00959 Mevalonate kinase family signature 26 50 1.4E-36 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 PRINTS PR00959 Mevalonate kinase family signature 166 185 1.4E-36 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 PRINTS PR00959 Mevalonate kinase family signature 118 140 1.4E-36 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 TIGRFAM TIGR00131 gal_kin: galactokinase 8 369 2.5E-86 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 Pfam PF08544 GHMP kinases C terminal 289 367 6.0E-13 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RM25_RS08210 ae092c229b9fc35324d2b11c23122be0 398 Gene3D G3DSA:3.30.230.10 6 215 1.7E-64 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS02160 08e9900176e54bf27a2423e47b714285 505 PANTHER PTHR11907 16 480 2.5E-218 T 22-04-2016 RM25_RS02160 08e9900176e54bf27a2423e47b714285 505 PIRSF PIRSF000485 15 478 1.3E-159 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RM25_RS02160 08e9900176e54bf27a2423e47b714285 505 Pfam PF00156 Phosphoribosyl transferase domain 293 396 3.8E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RM25_RS02160 08e9900176e54bf27a2423e47b714285 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 18 468 45.942 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RM25_RS02160 08e9900176e54bf27a2423e47b714285 505 Pfam PF13522 Glutamine amidotransferase domain 79 220 7.2E-16 T 22-04-2016 RM25_RS02160 08e9900176e54bf27a2423e47b714285 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 19 467 4.1E-153 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RM25_RS02160 08e9900176e54bf27a2423e47b714285 505 PANTHER PTHR11907:SF0 16 480 2.5E-218 T 22-04-2016 RM25_RS02160 08e9900176e54bf27a2423e47b714285 505 Gene3D G3DSA:3.40.50.2020 282 449 2.4E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS02160 08e9900176e54bf27a2423e47b714285 505 SUPERFAMILY SSF53271 261 472 1.84E-68 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS02160 08e9900176e54bf27a2423e47b714285 505 Gene3D G3DSA:3.60.20.10 19 267 7.7E-65 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RM25_RS02160 08e9900176e54bf27a2423e47b714285 505 SUPERFAMILY SSF56235 19 278 1.54E-61 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RM25_RS09015 b8dbfb3c85b51b48a486278bc8e5e585 185 SUPERFAMILY SSF53271 10 182 9.83E-35 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS09015 b8dbfb3c85b51b48a486278bc8e5e585 185 Gene3D G3DSA:3.40.50.2020 8 183 3.8E-48 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS09015 b8dbfb3c85b51b48a486278bc8e5e585 185 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 19 161 8.7E-36 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS09015 b8dbfb3c85b51b48a486278bc8e5e585 185 PANTHER PTHR19278 1 158 1.1E-44 T 22-04-2016 RM25_RS09015 b8dbfb3c85b51b48a486278bc8e5e585 185 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 185 23.994 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS09015 b8dbfb3c85b51b48a486278bc8e5e585 185 Pfam PF00156 Phosphoribosyl transferase domain 63 165 1.1E-8 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RM25_RS00235 43072f8721f7544b057e7ca45bf32129 227 Pfam PF01205 Uncharacterized protein family UPF0029 28 140 3.0E-25 T 22-04-2016 IPR001498 Impact, N-terminal RM25_RS00235 43072f8721f7544b057e7ca45bf32129 227 PANTHER PTHR16301:SF0 1 186 7.0E-42 T 22-04-2016 RM25_RS00235 43072f8721f7544b057e7ca45bf32129 227 Gene3D G3DSA:3.30.230.30 15 146 1.7E-40 T 22-04-2016 IPR001498 Impact, N-terminal RM25_RS00235 43072f8721f7544b057e7ca45bf32129 227 SUPERFAMILY SSF54211 15 146 3.79E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS00235 43072f8721f7544b057e7ca45bf32129 227 PANTHER PTHR16301 1 186 7.0E-42 T 22-04-2016 IPR023582 Impact family RM25_RS06380 77dbccb1c4250d7f8368b7b86ec6c031 198 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 109 194 4.6E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RM25_RS06380 77dbccb1c4250d7f8368b7b86ec6c031 198 PANTHER PTHR10516:SF320 96 197 9.8E-12 T 22-04-2016 RM25_RS06380 77dbccb1c4250d7f8368b7b86ec6c031 198 SUPERFAMILY SSF54534 85 197 2.95E-23 T 22-04-2016 RM25_RS06380 77dbccb1c4250d7f8368b7b86ec6c031 198 PANTHER PTHR10516 96 197 9.8E-12 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RM25_RS06380 77dbccb1c4250d7f8368b7b86ec6c031 198 Gene3D G3DSA:3.10.50.40 82 197 1.3E-21 T 22-04-2016 RM25_RS05240 c4b234af594f36c20925e5f85acb7731 223 SUPERFAMILY SSF52540 7 218 4.64E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05240 c4b234af594f36c20925e5f85acb7731 223 Hamap MF_00238 Cytidylate kinase [cmk]. 7 222 26.016 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RM25_RS05240 c4b234af594f36c20925e5f85acb7731 223 TIGRFAM TIGR00017 cmk: cytidylate kinase 7 215 4.4E-50 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RM25_RS05240 c4b234af594f36c20925e5f85acb7731 223 Gene3D G3DSA:3.40.50.300 7 218 1.0E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05240 c4b234af594f36c20925e5f85acb7731 223 Pfam PF02224 Cytidylate kinase 9 218 2.4E-53 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RM25_RS05310 20312547a9a435f0ddcbb7f0b5f142bc 398 Gene3D G3DSA:3.40.50.1820 40 378 2.6E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS05310 20312547a9a435f0ddcbb7f0b5f142bc 398 PANTHER PTHR32268 30 380 1.2E-144 T 22-04-2016 RM25_RS05310 20312547a9a435f0ddcbb7f0b5f142bc 398 PIRSF PIRSF000443 1 386 1.2E-124 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RM25_RS05310 20312547a9a435f0ddcbb7f0b5f142bc 398 PANTHER PTHR32268:SF11 30 380 1.2E-144 T 22-04-2016 RM25_RS05310 20312547a9a435f0ddcbb7f0b5f142bc 398 SUPERFAMILY SSF53474 26 379 9.2E-89 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS05310 20312547a9a435f0ddcbb7f0b5f142bc 398 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 31 378 1.1E-125 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RM25_RS05310 20312547a9a435f0ddcbb7f0b5f142bc 398 Pfam PF00561 alpha/beta hydrolase fold 59 366 1.7E-28 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RM25_RS05310 20312547a9a435f0ddcbb7f0b5f142bc 398 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 6 380 44.287 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RM25_RS08120 a12d7cffac5dadd143e88d9bc4a123b5 333 Gene3D G3DSA:3.30.420.10 131 158 1.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS08120 a12d7cffac5dadd143e88d9bc4a123b5 333 Gene3D G3DSA:3.30.420.10 190 321 1.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS08120 a12d7cffac5dadd143e88d9bc4a123b5 333 SUPERFAMILY SSF53098 137 148 3.67E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS08120 a12d7cffac5dadd143e88d9bc4a123b5 333 SUPERFAMILY SSF53098 187 328 3.67E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS08120 a12d7cffac5dadd143e88d9bc4a123b5 333 PANTHER PTHR24559 183 316 2.8E-16 T 22-04-2016 RM25_RS08120 a12d7cffac5dadd143e88d9bc4a123b5 333 PANTHER PTHR24559 125 149 2.8E-16 T 22-04-2016 RM25_RS08120 a12d7cffac5dadd143e88d9bc4a123b5 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 78 1.7E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS08120 a12d7cffac5dadd143e88d9bc4a123b5 333 SUPERFAMILY SSF46689 4 107 3.31E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS08120 a12d7cffac5dadd143e88d9bc4a123b5 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08120 a12d7cffac5dadd143e88d9bc4a123b5 333 Pfam PF00665 Integrase core domain 136 284 1.8E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 449 631 1.1E-25 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 SUPERFAMILY SSF52518 24 278 3.24E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 PIRSF PIRSF000159 20 1199 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 Gene3D G3DSA:3.40.50.970 816 1192 1.5E-126 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 766 777 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 710 721 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 981 1093 1.2E-11 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 Gene3D G3DSA:3.40.50.920 279 438 3.0E-60 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 Gene3D G3DSA:3.40.920.10 443 640 1.4E-65 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 289 371 2.5E-16 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 Gene3D G3DSA:3.40.50.970 24 278 1.9E-109 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 PANTHER PTHR32154 23 1200 0.0 T 22-04-2016 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 Gene3D G3DSA:3.30.70.20 692 796 5.4E-20 T 22-04-2016 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 SMART SM00890 644 700 1.6E-26 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 37 267 9.0E-81 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 Pfam PF13484 4Fe-4S double cluster binding domain 710 778 9.6E-11 T 22-04-2016 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 Pfam PF10371 Domain of unknown function 649 699 4.9E-22 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 Gene3D G3DSA:4.10.780.10 652 688 6.1E-18 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 SUPERFAMILY SSF52922 279 438 2.43E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 SUPERFAMILY SSF53323 443 689 1.44E-70 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 PANTHER PTHR32154:SF0 23 1200 0.0 T 22-04-2016 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 SUPERFAMILY SSF54862 687 859 1.67E-22 T 22-04-2016 RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 SUPERFAMILY SSF52518 815 1194 2.5E-115 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS03295 27a5d978a353532044c5190f8dd8ce78 1239 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 27 1191 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 RM25_RS11105 faa54ce785a66a256093419bdf39bd09 226 SUPERFAMILY SSF54909 6 223 1.18E-66 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RM25_RS11105 faa54ce785a66a256093419bdf39bd09 226 Pfam PF06778 Chlorite dismutase 33 215 6.4E-67 T 22-04-2016 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase RM25_RS11105 faa54ce785a66a256093419bdf39bd09 226 Gene3D G3DSA:3.30.70.1100 129 223 1.1E-36 T 22-04-2016 RM25_RS11105 faa54ce785a66a256093419bdf39bd09 226 PANTHER PTHR36843:SF1 1 226 2.1E-36 T 22-04-2016 RM25_RS11105 faa54ce785a66a256093419bdf39bd09 226 Gene3D G3DSA:3.30.70.1030 20 128 3.5E-20 T 22-04-2016 RM25_RS11105 faa54ce785a66a256093419bdf39bd09 226 PANTHER PTHR36843 1 226 2.1E-36 T 22-04-2016 RM25_RS11000 fa46427c729c271348fdec47d76a9824 275 PANTHER PTHR24320 1 272 2.7E-82 T 22-04-2016 RM25_RS11000 fa46427c729c271348fdec47d76a9824 275 Pfam PF00106 short chain dehydrogenase 5 192 5.3E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS11000 fa46427c729c271348fdec47d76a9824 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 8.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS11000 fa46427c729c271348fdec47d76a9824 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 8.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS11000 fa46427c729c271348fdec47d76a9824 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 8.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS11000 fa46427c729c271348fdec47d76a9824 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS11000 fa46427c729c271348fdec47d76a9824 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS11000 fa46427c729c271348fdec47d76a9824 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 8.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS11000 fa46427c729c271348fdec47d76a9824 275 SUPERFAMILY SSF51735 1 248 3.26E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS11000 fa46427c729c271348fdec47d76a9824 275 Gene3D G3DSA:3.40.50.720 1 242 2.5E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06900 b2f43065ea014a378ed7788d4f3debca 120 Gene3D G3DSA:2.70.70.10 5 111 2.4E-26 T 22-04-2016 RM25_RS06900 b2f43065ea014a378ed7788d4f3debca 120 PANTHER PTHR21666:SF190 1 111 2.3E-16 T 22-04-2016 RM25_RS06900 b2f43065ea014a378ed7788d4f3debca 120 PANTHER PTHR21666 1 111 2.3E-16 T 22-04-2016 RM25_RS06900 b2f43065ea014a378ed7788d4f3debca 120 Pfam PF01551 Peptidase family M23 15 106 6.4E-17 T 22-04-2016 IPR016047 Peptidase M23 RM25_RS06900 b2f43065ea014a378ed7788d4f3debca 120 SUPERFAMILY SSF51261 8 110 4.39E-20 T 22-04-2016 IPR011055 Duplicated hybrid motif RM25_RS11420 bfac38d69a5934e5c10143f550e82583 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 533 1.3E-15 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RM25_RS11420 bfac38d69a5934e5c10143f550e82583 555 Gene3D G3DSA:3.30.300.30 438 542 2.2E-25 T 22-04-2016 RM25_RS11420 bfac38d69a5934e5c10143f550e82583 555 Gene3D G3DSA:2.30.38.10 379 437 1.1E-11 T 22-04-2016 RM25_RS11420 bfac38d69a5934e5c10143f550e82583 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 22-04-2016 IPR020845 AMP-binding, conserved site RM25_RS11420 bfac38d69a5934e5c10143f550e82583 555 SUPERFAMILY SSF56801 20 543 2.88E-113 T 22-04-2016 RM25_RS11420 bfac38d69a5934e5c10143f550e82583 555 Gene3D G3DSA:3.40.50.980 196 347 9.0E-31 T 22-04-2016 RM25_RS11420 bfac38d69a5934e5c10143f550e82583 555 Pfam PF00501 AMP-binding enzyme 27 443 8.4E-65 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RM25_RS11420 bfac38d69a5934e5c10143f550e82583 555 Gene3D G3DSA:3.40.50.980 24 195 8.7E-27 T 22-04-2016 RM25_RS11420 bfac38d69a5934e5c10143f550e82583 555 PANTHER PTHR24095 27 535 2.9E-101 T 22-04-2016 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 Gene3D G3DSA:3.50.50.60 379 388 6.6E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 Gene3D G3DSA:3.50.50.60 36 324 6.6E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 PANTHER PTHR11985 26 550 2.8E-148 T 22-04-2016 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 SUPERFAMILY SSF51905 180 257 1.5E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 SUPERFAMILY SSF51905 34 142 1.5E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 Pfam PF01266 FAD dependent oxidoreductase 39 363 6.3E-44 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 51 61 3.8E-20 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 67 79 3.8E-20 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 112 124 3.8E-20 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 3.8E-20 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 356 362 3.8E-20 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 387 399 3.8E-20 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 SUPERFAMILY SSF54373 268 362 1.67E-5 T 22-04-2016 RM25_RS07795 def8af92af0aef6db954a6491dc4d54b 561 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 419 534 1.4E-26 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS00270 1803517cfd09fa611e9a5ba7b0b51ec7 256 SUPERFAMILY SSF53448 9 217 7.47E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS00270 1803517cfd09fa611e9a5ba7b0b51ec7 256 PANTHER PTHR10859:SF84 9 238 2.9E-41 T 22-04-2016 RM25_RS00270 1803517cfd09fa611e9a5ba7b0b51ec7 256 Pfam PF00535 Glycosyl transferase family 2 14 166 7.7E-17 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RM25_RS00270 1803517cfd09fa611e9a5ba7b0b51ec7 256 Gene3D G3DSA:3.90.550.10 14 115 1.2E-11 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS00270 1803517cfd09fa611e9a5ba7b0b51ec7 256 PANTHER PTHR10859 9 238 2.9E-41 T 22-04-2016 RM25_RS06785 2cb7826e6c8b3c0bd6770868ef057aa6 246 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 42 244 2.4E-56 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS06785 2cb7826e6c8b3c0bd6770868ef057aa6 246 SUPERFAMILY SSF55347 105 215 1.13E-37 T 22-04-2016 RM25_RS06785 2cb7826e6c8b3c0bd6770868ef057aa6 246 Gene3D G3DSA:3.40.50.720 1 120 2.1E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06785 2cb7826e6c8b3c0bd6770868ef057aa6 246 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 104 1.6E-26 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS06785 2cb7826e6c8b3c0bd6770868ef057aa6 246 PANTHER PTHR20836 1 246 4.5E-75 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS06785 2cb7826e6c8b3c0bd6770868ef057aa6 246 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 126 143 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS06785 2cb7826e6c8b3c0bd6770868ef057aa6 246 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 244 29.315 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS06785 2cb7826e6c8b3c0bd6770868ef057aa6 246 SUPERFAMILY SSF51735 1 131 1.45E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06785 2cb7826e6c8b3c0bd6770868ef057aa6 246 Gene3D G3DSA:3.30.360.10 121 212 4.3E-32 T 22-04-2016 RM25_RS06785 2cb7826e6c8b3c0bd6770868ef057aa6 246 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 107 243 9.9E-30 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS06785 2cb7826e6c8b3c0bd6770868ef057aa6 246 PIRSF PIRSF000161 1 246 1.2E-64 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS07945 8587dddcd416ce98de96ff6b10b24846 172 SUPERFAMILY SSF88697 25 157 1.81E-21 T 22-04-2016 IPR015947 PUA-like domain RM25_RS07945 8587dddcd416ce98de96ff6b10b24846 172 SMART SM01022 33 157 7.3E-14 T 22-04-2016 IPR007374 ASCH domain RM25_RS07945 8587dddcd416ce98de96ff6b10b24846 172 Pfam PF04266 ASCH domain 43 129 9.5E-11 T 22-04-2016 IPR007374 ASCH domain RM25_RS07945 8587dddcd416ce98de96ff6b10b24846 172 PANTHER PTHR39203 4 161 3.2E-26 T 22-04-2016 RM25_RS07945 8587dddcd416ce98de96ff6b10b24846 172 Gene3D G3DSA:3.10.400.10 20 162 4.8E-33 T 22-04-2016 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 13 476 6.1E-194 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 SUPERFAMILY SSF48179 185 479 1.26E-114 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 365 387 9.9E-79 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 257 284 9.9E-79 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 176 204 9.9E-79 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 12 35 9.9E-79 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 128 153 9.9E-79 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 75 104 9.9E-79 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 SUPERFAMILY SSF51735 12 185 4.68E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 187 475 5.8E-117 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 Gene3D G3DSA:3.40.50.720 4 188 5.1E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 13 182 3.8E-49 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 SMART SM01350 187 476 2.0E-182 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 Gene3D G3DSA:1.20.5.320 446 482 1.1E-16 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 PANTHER PTHR11811:SF25 10 483 5.0E-252 T 22-04-2016 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 PANTHER PTHR11811 10 483 5.0E-252 T 22-04-2016 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 Gene3D G3DSA:1.10.1040.10 189 441 2.2E-102 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RM25_RS03790 c65ad63834f37081a67ed4d934d1ae26 485 PIRSF PIRSF000109 7 484 8.8E-195 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS05820 d9c3c128b4ae6c5a82a7b48382456f3a 461 SUPERFAMILY SSF55486 55 415 8.79E-87 T 22-04-2016 RM25_RS05820 d9c3c128b4ae6c5a82a7b48382456f3a 461 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 55 414 2.5E-88 T 22-04-2016 IPR018766 Zinicin-like metallopeptidase type 2 RM25_RS05820 d9c3c128b4ae6c5a82a7b48382456f3a 461 PANTHER PTHR39420 27 444 3.2E-103 T 22-04-2016 RM25_RS05820 d9c3c128b4ae6c5a82a7b48382456f3a 461 Pfam PF10103 Zinicin-like metallopeptidase 55 414 1.8E-104 T 22-04-2016 IPR018766 Zinicin-like metallopeptidase type 2 RM25_RS05820 d9c3c128b4ae6c5a82a7b48382456f3a 461 PANTHER PTHR39420:SF2 27 444 3.2E-103 T 22-04-2016 RM25_RS04595 9552541576befd3cd606e3b5ca6a6fe3 421 Pfam PF01612 3'-5' exonuclease 13 179 3.2E-30 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RM25_RS04595 9552541576befd3cd606e3b5ca6a6fe3 421 SUPERFAMILY SSF47819 207 322 1.46E-15 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RM25_RS04595 9552541576befd3cd606e3b5ca6a6fe3 421 PANTHER PTHR12124 14 299 6.1E-43 T 22-04-2016 RM25_RS04595 9552541576befd3cd606e3b5ca6a6fe3 421 SMART SM00474 12 185 8.3E-33 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RM25_RS04595 9552541576befd3cd606e3b5ca6a6fe3 421 Pfam PF00570 HRDC domain 230 300 3.5E-9 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RM25_RS04595 9552541576befd3cd606e3b5ca6a6fe3 421 Gene3D G3DSA:3.30.420.10 13 188 5.3E-10 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS04595 9552541576befd3cd606e3b5ca6a6fe3 421 SUPERFAMILY SSF53098 12 220 5.9E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10815 2b58f283baf44f53f00d2baa8fd08872 230 Pfam PF00072 Response regulator receiver domain 5 114 1.3E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS10815 2b58f283baf44f53f00d2baa8fd08872 230 PANTHER PTHR26402:SF578 3 227 1.8E-94 T 22-04-2016 RM25_RS10815 2b58f283baf44f53f00d2baa8fd08872 230 Gene3D G3DSA:3.40.50.2300 2 127 3.5E-44 T 22-04-2016 RM25_RS10815 2b58f283baf44f53f00d2baa8fd08872 230 SMART SM00862 150 225 1.4E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS10815 2b58f283baf44f53f00d2baa8fd08872 230 SMART SM00448 3 114 5.9E-43 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS10815 2b58f283baf44f53f00d2baa8fd08872 230 SUPERFAMILY SSF52172 3 184 2.56E-44 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS10815 2b58f283baf44f53f00d2baa8fd08872 230 PANTHER PTHR26402 3 227 1.8E-94 T 22-04-2016 RM25_RS10815 2b58f283baf44f53f00d2baa8fd08872 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 3.4E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS10815 2b58f283baf44f53f00d2baa8fd08872 230 Gene3D G3DSA:1.10.10.10 128 227 1.4E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03285 d85e93e5ec97d750a77f1ab75497751b 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 135 6.6E-29 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RM25_RS03285 d85e93e5ec97d750a77f1ab75497751b 347 SMART SM00829 13 345 6.4E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RM25_RS03285 d85e93e5ec97d750a77f1ab75497751b 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RM25_RS03285 d85e93e5ec97d750a77f1ab75497751b 347 Pfam PF00107 Zinc-binding dehydrogenase 178 298 1.0E-24 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RM25_RS03285 d85e93e5ec97d750a77f1ab75497751b 347 SUPERFAMILY SSF50129 3 172 4.26E-49 T 22-04-2016 IPR011032 GroES-like RM25_RS03285 d85e93e5ec97d750a77f1ab75497751b 347 Gene3D G3DSA:3.40.50.720 172 290 1.5E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS03285 d85e93e5ec97d750a77f1ab75497751b 347 Gene3D G3DSA:3.90.180.10 2 171 1.2E-55 T 22-04-2016 IPR011032 GroES-like RM25_RS03285 d85e93e5ec97d750a77f1ab75497751b 347 PANTHER PTHR11695 17 347 2.4E-95 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RM25_RS03285 d85e93e5ec97d750a77f1ab75497751b 347 SUPERFAMILY SSF51735 139 311 8.77E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS09510 654674bcc56007f08235ad8e1550e1e3 251 PANTHER PTHR21089 16 245 5.4E-60 T 22-04-2016 RM25_RS09510 654674bcc56007f08235ad8e1550e1e3 251 PANTHER PTHR21089:SF5 16 245 5.4E-60 T 22-04-2016 RM25_RS09510 654674bcc56007f08235ad8e1550e1e3 251 Pfam PF01487 Type I 3-dehydroquinase 20 243 5.3E-56 T 22-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RM25_RS09510 654674bcc56007f08235ad8e1550e1e3 251 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 246 33.462 T 22-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RM25_RS09510 654674bcc56007f08235ad8e1550e1e3 251 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 18 242 5.5E-50 T 22-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RM25_RS09510 654674bcc56007f08235ad8e1550e1e3 251 SUPERFAMILY SSF51569 2 246 1.03E-59 T 22-04-2016 RM25_RS09510 654674bcc56007f08235ad8e1550e1e3 251 Gene3D G3DSA:3.20.20.70 4 246 1.1E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS06910 3104ccec78f4e43b8bb52829f639c00a 308 Pfam PF00589 Phage integrase family 119 294 2.0E-42 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS06910 3104ccec78f4e43b8bb52829f639c00a 308 PANTHER PTHR30349:SF5 18 308 1.5E-81 T 22-04-2016 RM25_RS06910 3104ccec78f4e43b8bb52829f639c00a 308 Gene3D G3DSA:1.10.443.10 119 301 1.1E-51 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS06910 3104ccec78f4e43b8bb52829f639c00a 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 18 95 2.2E-14 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RM25_RS06910 3104ccec78f4e43b8bb52829f639c00a 308 Gene3D G3DSA:1.10.150.130 17 107 4.8E-19 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RM25_RS06910 3104ccec78f4e43b8bb52829f639c00a 308 PANTHER PTHR30349 18 308 1.5E-81 T 22-04-2016 RM25_RS06910 3104ccec78f4e43b8bb52829f639c00a 308 SUPERFAMILY SSF56349 18 301 5.3E-53 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RM25_RS06910 3104ccec78f4e43b8bb52829f639c00a 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 11 308 31.89 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 Gene3D G3DSA:1.20.1250.20 251 454 3.6E-11 T 22-04-2016 RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 Gene3D G3DSA:1.20.1250.20 5 177 8.5E-23 T 22-04-2016 RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 PANTHER PTHR23501 6 407 3.3E-132 T 22-04-2016 RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 6 405 1.2E-72 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 SUPERFAMILY SSF103473 3 184 4.05E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 SUPERFAMILY SSF103473 235 452 4.05E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 Pfam PF07690 Major Facilitator Superfamily 6 396 1.2E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 4 28 6.2E-10 T 22-04-2016 RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 387 406 6.2E-10 T 22-04-2016 RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 190 208 6.2E-10 T 22-04-2016 RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 95 115 6.2E-10 T 22-04-2016 RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 125 149 6.2E-10 T 22-04-2016 RM25_RS09805 594a69e1dfbf4505fb4eeac913f19746 467 PANTHER PTHR23501:SF63 6 407 3.3E-132 T 22-04-2016 RM25_RS09915 b377c5d18bdbe4bfbffb243e46c5f727 323 SUPERFAMILY SSF52540 44 285 7.72E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09915 b377c5d18bdbe4bfbffb243e46c5f727 323 SMART SM00382 56 218 3.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09915 b377c5d18bdbe4bfbffb243e46c5f727 323 Pfam PF07728 AAA domain (dynein-related subfamily) 59 208 2.2E-19 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RM25_RS09915 b377c5d18bdbe4bfbffb243e46c5f727 323 Gene3D G3DSA:3.40.50.300 48 221 3.5E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09915 b377c5d18bdbe4bfbffb243e46c5f727 323 PANTHER PTHR37291 116 301 2.3E-17 T 22-04-2016 RM25_RS04350 cc70375ad3afadce5f8bed5c32a42f43 504 Pfam PF04055 Radical SAM superfamily 170 341 1.0E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RM25_RS04350 cc70375ad3afadce5f8bed5c32a42f43 504 SMART SM00729 166 384 2.1E-53 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RM25_RS04350 cc70375ad3afadce5f8bed5c32a42f43 504 SUPERFAMILY SSF102114 160 392 7.59E-59 T 22-04-2016 RM25_RS04350 cc70375ad3afadce5f8bed5c32a42f43 504 Gene3D G3DSA:3.80.30.20 167 395 1.9E-80 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RM25_RS04350 cc70375ad3afadce5f8bed5c32a42f43 504 PANTHER PTHR11918 18 460 2.1E-157 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RM25_RS04350 cc70375ad3afadce5f8bed5c32a42f43 504 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 22 460 8.1E-134 T 22-04-2016 RM25_RS04350 cc70375ad3afadce5f8bed5c32a42f43 504 PANTHER PTHR11918:SF43 18 460 2.1E-157 T 22-04-2016 RM25_RS04350 cc70375ad3afadce5f8bed5c32a42f43 504 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 170 190 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RM25_RS04350 cc70375ad3afadce5f8bed5c32a42f43 504 Pfam PF00919 Uncharacterized protein family UPF0004 21 123 3.9E-25 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RM25_RS04350 cc70375ad3afadce5f8bed5c32a42f43 504 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 18 466 63.472 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 RM25_RS04350 cc70375ad3afadce5f8bed5c32a42f43 504 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 20 462 2.4E-142 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RM25_RS06540 196f617d62e4441c9dc7567ef239f936 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06540 196f617d62e4441c9dc7567ef239f936 64 Pfam PF01632 Ribosomal protein L35 2 62 1.9E-24 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06540 196f617d62e4441c9dc7567ef239f936 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 1.4E-23 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RM25_RS06540 196f617d62e4441c9dc7567ef239f936 64 SUPERFAMILY SSF143034 2 63 4.97E-21 T 22-04-2016 RM25_RS06540 196f617d62e4441c9dc7567ef239f936 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.315 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RM25_RS06540 196f617d62e4441c9dc7567ef239f936 64 PANTHER PTHR33343 1 62 7.0E-23 T 22-04-2016 RM25_RS06540 196f617d62e4441c9dc7567ef239f936 64 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.4E-15 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RM25_RS06540 196f617d62e4441c9dc7567ef239f936 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.4E-15 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RM25_RS06540 196f617d62e4441c9dc7567ef239f936 64 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.4E-15 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RM25_RS05050 2114cba8e0a77a6f51ac5a2f3ed6616e 179 SUPERFAMILY SSF53271 12 173 6.63E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS05050 2114cba8e0a77a6f51ac5a2f3ed6616e 179 PANTHER PTHR32315 1 179 3.6E-72 T 22-04-2016 RM25_RS05050 2114cba8e0a77a6f51ac5a2f3ed6616e 179 Pfam PF00156 Phosphoribosyl transferase domain 44 145 1.5E-12 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RM25_RS05050 2114cba8e0a77a6f51ac5a2f3ed6616e 179 Gene3D G3DSA:3.40.50.2020 8 174 6.1E-57 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS05050 2114cba8e0a77a6f51ac5a2f3ed6616e 179 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 173 1.8E-56 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 RM25_RS05050 2114cba8e0a77a6f51ac5a2f3ed6616e 179 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 10 179 34.31 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 RM25_RS09750 68166b8505d998910992e56016769da4 339 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 102 154 1.8E-6 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RM25_RS09750 68166b8505d998910992e56016769da4 339 PANTHER PTHR13696:SF64 98 224 2.7E-15 T 22-04-2016 RM25_RS09750 68166b8505d998910992e56016769da4 339 SUPERFAMILY SSF52540 101 331 5.55E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09750 68166b8505d998910992e56016769da4 339 Gene3D G3DSA:3.40.50.300 100 335 1.3E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09750 68166b8505d998910992e56016769da4 339 PANTHER PTHR13696 98 224 2.7E-15 T 22-04-2016 RM25_RS09750 68166b8505d998910992e56016769da4 339 TIGRFAM TIGR03815 CpaE_hom_Actino: helicase/secretion neighborhood CpaE-like protein 2 327 1.2E-65 T 22-04-2016 IPR022521 Conserved hypothetical protein CHP03815, CpaE-like RM25_RS02270 6a962d6b1a52c9ef78b468dacad031f6 529 PANTHER PTHR14226 312 367 1.7E-20 T 22-04-2016 RM25_RS02270 6a962d6b1a52c9ef78b468dacad031f6 529 PANTHER PTHR14226 250 296 1.7E-20 T 22-04-2016 RM25_RS02270 6a962d6b1a52c9ef78b468dacad031f6 529 PANTHER PTHR14226 28 111 1.7E-20 T 22-04-2016 RM25_RS02270 6a962d6b1a52c9ef78b468dacad031f6 529 Gene3D G3DSA:3.40.1090.10 311 354 4.9E-8 T 22-04-2016 RM25_RS02270 6a962d6b1a52c9ef78b468dacad031f6 529 Gene3D G3DSA:3.40.1090.10 24 163 4.9E-8 T 22-04-2016 RM25_RS02270 6a962d6b1a52c9ef78b468dacad031f6 529 SUPERFAMILY SSF52151 28 105 1.74E-33 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RM25_RS02270 6a962d6b1a52c9ef78b468dacad031f6 529 SUPERFAMILY SSF52151 245 396 1.74E-33 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RM25_RS02270 6a962d6b1a52c9ef78b468dacad031f6 529 Pfam PF01734 Patatin-like phospholipase 29 353 1.7E-32 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RM25_RS09535 cf3f5cf25e8050aa300793659a821d7a 118 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 6 115 6.1E-29 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RM25_RS09535 cf3f5cf25e8050aa300793659a821d7a 118 SUPERFAMILY SSF55620 6 116 6.67E-28 T 22-04-2016 RM25_RS09535 cf3f5cf25e8050aa300793659a821d7a 118 TIGRFAM TIGR00526 folB_dom: FolB domain 5 116 2.4E-22 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RM25_RS09535 cf3f5cf25e8050aa300793659a821d7a 118 PANTHER PTHR20941:SF3 6 116 2.2E-18 T 22-04-2016 RM25_RS09535 cf3f5cf25e8050aa300793659a821d7a 118 PANTHER PTHR20941 6 116 2.2E-18 T 22-04-2016 RM25_RS09535 cf3f5cf25e8050aa300793659a821d7a 118 SMART SM00905 6 115 1.2E-39 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RM25_RS09535 cf3f5cf25e8050aa300793659a821d7a 118 Pfam PF02152 Dihydroneopterin aldolase 7 113 4.3E-29 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RM25_RS09535 cf3f5cf25e8050aa300793659a821d7a 118 Gene3D G3DSA:3.30.1130.10 6 116 3.0E-34 T 22-04-2016 RM25_RS02570 47edbdd2f0d261e39988321dc4c06f8c 156 SUPERFAMILY SSF47973 1 149 1.1E-58 T 22-04-2016 IPR023798 Ribosomal protein S7 domain RM25_RS02570 47edbdd2f0d261e39988321dc4c06f8c 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.2E-61 T 22-04-2016 IPR023798 Ribosomal protein S7 domain RM25_RS02570 47edbdd2f0d261e39988321dc4c06f8c 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.2E-67 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RM25_RS02570 47edbdd2f0d261e39988321dc4c06f8c 156 Gene3D G3DSA:1.10.455.10 8 156 2.1E-63 T 22-04-2016 IPR023798 Ribosomal protein S7 domain RM25_RS02570 47edbdd2f0d261e39988321dc4c06f8c 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.846 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RM25_RS02570 47edbdd2f0d261e39988321dc4c06f8c 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 RM25_RS02570 47edbdd2f0d261e39988321dc4c06f8c 156 PIRSF PIRSF002122 6 156 4.0E-58 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RM25_RS02570 47edbdd2f0d261e39988321dc4c06f8c 156 PANTHER PTHR11205 1 156 2.1E-88 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RM25_RS02815 9003015018aae17d1a775dfcc195b5f8 272 SMART SM00382 45 236 4.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS02815 9003015018aae17d1a775dfcc195b5f8 272 SUPERFAMILY SSF52540 19 242 2.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02815 9003015018aae17d1a775dfcc195b5f8 272 Pfam PF00005 ABC transporter 38 179 6.7E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS02815 9003015018aae17d1a775dfcc195b5f8 272 Gene3D G3DSA:3.40.50.300 14 242 2.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02815 9003015018aae17d1a775dfcc195b5f8 272 PANTHER PTHR24220:SF593 22 239 1.6E-88 T 22-04-2016 RM25_RS02815 9003015018aae17d1a775dfcc195b5f8 272 PANTHER PTHR24220 22 239 1.6E-88 T 22-04-2016 RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 465 9.6E-131 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 Pfam PF02875 Mur ligase family, glutamate ligase domain 324 411 3.7E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 SUPERFAMILY SSF53623 101 319 7.06E-51 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 PANTHER PTHR23135 10 462 6.4E-152 T 22-04-2016 RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 SUPERFAMILY SSF51984 18 103 9.16E-24 T 22-04-2016 RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 Gene3D G3DSA:3.40.1190.10 104 322 1.2E-63 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 SUPERFAMILY SSF53244 321 470 5.34E-43 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 PANTHER PTHR23135:SF5 10 462 6.4E-152 T 22-04-2016 RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 473 34.798 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 Gene3D G3DSA:3.40.50.720 18 103 5.9E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 Pfam PF01225 Mur ligase family, catalytic domain 18 115 4.4E-22 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 Gene3D G3DSA:3.90.190.20 324 472 1.9E-49 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS07245 2bf17ee1a13a731a7151bb0c0541cd84 480 Pfam PF08245 Mur ligase middle domain 120 300 2.1E-24 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS05385 c414825a6142e576e2c2dc5445388615 234 SUPERFAMILY SSF52540 2 232 2.07E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05385 c414825a6142e576e2c2dc5445388615 234 PANTHER PTHR24220:SF568 3 233 4.5E-130 T 22-04-2016 RM25_RS05385 c414825a6142e576e2c2dc5445388615 234 Pfam PF00005 ABC transporter 17 162 3.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS05385 c414825a6142e576e2c2dc5445388615 234 SMART SM00382 26 211 5.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS05385 c414825a6142e576e2c2dc5445388615 234 PIRSF PIRSF039137 1 234 8.2E-109 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 RM25_RS05385 c414825a6142e576e2c2dc5445388615 234 Gene3D G3DSA:3.40.50.300 1 230 6.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05385 c414825a6142e576e2c2dc5445388615 234 PANTHER PTHR24220 3 233 4.5E-130 T 22-04-2016 RM25_RS05385 c414825a6142e576e2c2dc5445388615 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS07500 aa8d82898a90922aec96941aade02276 444 SUPERFAMILY SSF54368 7 101 1.57E-28 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07500 aa8d82898a90922aec96941aade02276 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 96 2.4E-26 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07500 aa8d82898a90922aec96941aade02276 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 231 246 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07500 aa8d82898a90922aec96941aade02276 444 PANTHER PTHR20852:SF7 1 444 6.5E-173 T 22-04-2016 RM25_RS07500 aa8d82898a90922aec96941aade02276 444 Gene3D G3DSA:3.10.20.70 6 106 5.2E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07500 aa8d82898a90922aec96941aade02276 444 SUPERFAMILY SSF55931 105 441 2.45E-118 T 22-04-2016 RM25_RS07500 aa8d82898a90922aec96941aade02276 444 Pfam PF00120 Glutamine synthetase, catalytic domain 104 439 8.8E-127 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07500 aa8d82898a90922aec96941aade02276 444 SMART SM01230 103 354 7.7E-123 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RM25_RS07500 aa8d82898a90922aec96941aade02276 444 PANTHER PTHR20852 1 444 6.5E-173 T 22-04-2016 RM25_RS07500 aa8d82898a90922aec96941aade02276 444 Gene3D G3DSA:3.30.590.10 107 431 3.3E-119 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 Gene3D G3DSA:3.50.50.60 304 361 3.8E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 Gene3D G3DSA:3.50.50.60 25 166 3.8E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 199 224 1.0E-42 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 368 389 1.0E-42 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 288 302 1.0E-42 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 331 338 1.0E-42 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 62 77 1.0E-42 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 448 1.0E-42 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 27 49 1.0E-42 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 1.0E-42 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 303 1.8E-26 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 199 217 1.8E-26 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 338 1.8E-26 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.8E-26 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PANTHER PTHR22912 14 485 4.0E-103 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 372 481 5.2E-17 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PIRSF PIRSF000350 13 476 1.3E-65 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 PANTHER PTHR22912:SF125 14 485 4.0E-103 T 22-04-2016 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 Gene3D G3DSA:3.30.390.30 366 486 6.8E-27 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 63 73 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 26 350 2.0E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 Gene3D G3DSA:3.50.50.60 167 303 5.5E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 SUPERFAMILY SSF55424 370 488 7.04E-23 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RM25_RS09430 3aefad34676b53b497c8a0831e6f7dab 506 SUPERFAMILY SSF51905 23 351 8.43E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS02795 e23b99a607ff1c18464de82a19711011 195 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.723 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02795 e23b99a607ff1c18464de82a19711011 195 Pfam PF01196 Ribosomal protein L17 21 116 1.2E-34 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02795 e23b99a607ff1c18464de82a19711011 195 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02795 e23b99a607ff1c18464de82a19711011 195 PANTHER PTHR14413 1 118 1.7E-50 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02795 e23b99a607ff1c18464de82a19711011 195 PANTHER PTHR14413:SF5 1 118 1.7E-50 T 22-04-2016 RM25_RS02795 e23b99a607ff1c18464de82a19711011 195 TIGRFAM TIGR00059 L17: ribosomal protein bL17 9 116 3.3E-37 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02795 e23b99a607ff1c18464de82a19711011 195 Gene3D G3DSA:3.90.1030.10 3 116 1.6E-42 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02795 e23b99a607ff1c18464de82a19711011 195 SUPERFAMILY SSF64263 1 117 4.71E-43 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS03640 45133f901e6b6290bffc4cf05f1538a0 162 Gene3D G3DSA:3.40.30.10 3 156 4.2E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS03640 45133f901e6b6290bffc4cf05f1538a0 162 Pfam PF00578 AhpC/TSA family 7 129 9.6E-32 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RM25_RS03640 45133f901e6b6290bffc4cf05f1538a0 162 PANTHER PTHR10681 1 150 1.3E-34 T 22-04-2016 RM25_RS03640 45133f901e6b6290bffc4cf05f1538a0 162 SUPERFAMILY SSF52833 1 156 5.21E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS07265 20b05ff9010bf7500d466029ba109033 358 ProSitePatterns PS01348 MraY family signature 2. 178 189 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS07265 20b05ff9010bf7500d466029ba109033 358 Pfam PF00953 Glycosyl transferase family 4 82 275 5.7E-36 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS07265 20b05ff9010bf7500d466029ba109033 358 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 351 22.468 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS07265 20b05ff9010bf7500d466029ba109033 358 PANTHER PTHR22926:SF5 1 209 3.1E-126 T 22-04-2016 RM25_RS07265 20b05ff9010bf7500d466029ba109033 358 PANTHER PTHR22926:SF5 226 354 3.1E-126 T 22-04-2016 RM25_RS07265 20b05ff9010bf7500d466029ba109033 358 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS07265 20b05ff9010bf7500d466029ba109033 358 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 56 2.3E-4 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS07265 20b05ff9010bf7500d466029ba109033 358 PANTHER PTHR22926 1 209 3.1E-126 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS07265 20b05ff9010bf7500d466029ba109033 358 PANTHER PTHR22926 226 354 3.1E-126 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS07265 20b05ff9010bf7500d466029ba109033 358 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 20 345 3.8E-95 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS11765 af71962a57df0cbf5bb6505847a520e3 115 SUPERFAMILY SSF50346 6 114 1.88E-12 T 22-04-2016 IPR011033 PRC-barrel-like RM25_RS11765 af71962a57df0cbf5bb6505847a520e3 115 Pfam PF05239 PRC-barrel domain 8 71 1.4E-6 T 22-04-2016 IPR027275 PRC-barrel domain RM25_RS11765 af71962a57df0cbf5bb6505847a520e3 115 Gene3D G3DSA:2.30.30.240 10 63 4.2E-4 T 22-04-2016 RM25_RS08740 afb3e1e7953ad43027dccd9b2939acd7 269 PANTHER PTHR30296:SF0 25 269 8.7E-105 T 22-04-2016 RM25_RS08740 afb3e1e7953ad43027dccd9b2939acd7 269 Pfam PF02754 Cysteine-rich domain 26 106 8.2E-13 T 22-04-2016 IPR004017 Cysteine-rich domain RM25_RS08740 afb3e1e7953ad43027dccd9b2939acd7 269 Pfam PF02754 Cysteine-rich domain 157 241 6.1E-15 T 22-04-2016 IPR004017 Cysteine-rich domain RM25_RS08740 afb3e1e7953ad43027dccd9b2939acd7 269 PANTHER PTHR30296 25 269 8.7E-105 T 22-04-2016 RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 212 1.6E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 PANTHER PTHR26402:SF564 5 217 1.9E-94 T 22-04-2016 RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 Pfam PF00072 Response regulator receiver domain 7 119 1.7E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 SMART SM00448 5 118 1.2E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 1.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 1.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 1.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 Gene3D G3DSA:1.10.10.10 127 218 1.2E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 SMART SM00421 155 212 9.9E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 SUPERFAMILY SSF46894 142 217 1.77E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 Gene3D G3DSA:3.40.50.2300 2 126 7.1E-36 T 22-04-2016 RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 SUPERFAMILY SSF52172 4 136 4.13E-32 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 PANTHER PTHR26402 5 217 1.9E-94 T 22-04-2016 RM25_RS10265 4cbfc13789160d503fe6f73e4e63b06c 220 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00625 c21668d5c391f370564d19900c35b488 434 Gene3D G3DSA:1.10.230.10 280 372 8.7E-30 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RM25_RS00625 c21668d5c391f370564d19900c35b488 434 PRINTS PR00143 Citrate synthase signature 218 233 1.7E-43 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS00625 c21668d5c391f370564d19900c35b488 434 PRINTS PR00143 Citrate synthase signature 296 316 1.7E-43 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS00625 c21668d5c391f370564d19900c35b488 434 PRINTS PR00143 Citrate synthase signature 379 393 1.7E-43 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS00625 c21668d5c391f370564d19900c35b488 434 PRINTS PR00143 Citrate synthase signature 164 177 1.7E-43 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS00625 c21668d5c391f370564d19900c35b488 434 PRINTS PR00143 Citrate synthase signature 240 268 1.7E-43 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS00625 c21668d5c391f370564d19900c35b488 434 PRINTS PR00143 Citrate synthase signature 359 375 1.7E-43 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS00625 c21668d5c391f370564d19900c35b488 434 PANTHER PTHR11739 12 433 2.1E-144 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS00625 c21668d5c391f370564d19900c35b488 434 PIRSF PIRSF001369 36 429 1.3E-127 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 RM25_RS00625 c21668d5c391f370564d19900c35b488 434 SUPERFAMILY SSF48256 2 428 8.77E-133 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS00625 c21668d5c391f370564d19900c35b488 434 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 RM25_RS00625 c21668d5c391f370564d19900c35b488 434 Pfam PF00285 Citrate synthase, C-terminal domain 45 411 1.7E-116 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RM25_RS00625 c21668d5c391f370564d19900c35b488 434 Gene3D G3DSA:1.10.580.10 51 279 3.6E-76 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RM25_RS10275 d5283e4f3931d8223f8148472bf2f06c 462 PANTHER PTHR23513:SF11 13 439 2.7E-47 T 22-04-2016 RM25_RS10275 d5283e4f3931d8223f8148472bf2f06c 462 PANTHER PTHR23513 13 439 2.7E-47 T 22-04-2016 RM25_RS10275 d5283e4f3931d8223f8148472bf2f06c 462 Gene3D G3DSA:1.20.1250.20 28 226 6.1E-8 T 22-04-2016 RM25_RS10275 d5283e4f3931d8223f8148472bf2f06c 462 Gene3D G3DSA:1.20.1250.20 257 440 3.3E-11 T 22-04-2016 RM25_RS10275 d5283e4f3931d8223f8148472bf2f06c 462 SUPERFAMILY SSF103473 28 440 1.57E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS05065 671d055d91cb48ce6f9a61fe87b07948 228 Gene3D G3DSA:3.60.15.10 7 219 5.3E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS05065 671d055d91cb48ce6f9a61fe87b07948 228 SUPERFAMILY SSF56281 116 226 4.46E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS05065 671d055d91cb48ce6f9a61fe87b07948 228 SUPERFAMILY SSF56281 6 87 4.46E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS05065 671d055d91cb48ce6f9a61fe87b07948 228 PANTHER PTHR11935 1 220 1.3E-43 T 22-04-2016 RM25_RS05065 671d055d91cb48ce6f9a61fe87b07948 228 SMART SM00849 12 203 4.0E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS05065 671d055d91cb48ce6f9a61fe87b07948 228 Pfam PF00753 Metallo-beta-lactamase superfamily 9 191 6.4E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS08975 ea5779afa8623ad0760f944ff74767b1 430 SUPERFAMILY SSF103473 224 428 1.83E-7 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS08975 ea5779afa8623ad0760f944ff74767b1 430 SUPERFAMILY SSF103473 44 194 1.83E-7 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS08975 ea5779afa8623ad0760f944ff74767b1 430 Pfam PF00083 Sugar (and other) transporter 45 292 2.6E-13 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RM25_RS04345 cd2e2f45a33b036e27d66edae845e72c 271 PANTHER PTHR24220 34 271 4.2E-119 T 22-04-2016 RM25_RS04345 cd2e2f45a33b036e27d66edae845e72c 271 PANTHER PTHR24220:SF447 34 271 4.2E-119 T 22-04-2016 RM25_RS04345 cd2e2f45a33b036e27d66edae845e72c 271 SUPERFAMILY SSF52540 33 266 1.66E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04345 cd2e2f45a33b036e27d66edae845e72c 271 Pfam PF00005 ABC transporter 50 196 4.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS04345 cd2e2f45a33b036e27d66edae845e72c 271 SMART SM00382 57 244 3.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS04345 cd2e2f45a33b036e27d66edae845e72c 271 Gene3D G3DSA:3.40.50.300 31 267 9.2E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04345 cd2e2f45a33b036e27d66edae845e72c 271 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS04345 cd2e2f45a33b036e27d66edae845e72c 271 PIRSF PIRSF039085 29 271 1.1E-97 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RM25_RS04780 49bdb87e97f425964eb9b7841e8e1ea0 398 SUPERFAMILY SSF53756 1 392 2.64E-117 T 22-04-2016 RM25_RS04780 49bdb87e97f425964eb9b7841e8e1ea0 398 PANTHER PTHR10788:SF6 1 392 2.8E-146 T 22-04-2016 RM25_RS04780 49bdb87e97f425964eb9b7841e8e1ea0 398 PANTHER PTHR10788 1 392 2.8E-146 T 22-04-2016 RM25_RS04780 49bdb87e97f425964eb9b7841e8e1ea0 398 Gene3D G3DSA:3.40.50.2000 3 181 5.2E-66 T 22-04-2016 RM25_RS04780 49bdb87e97f425964eb9b7841e8e1ea0 398 Gene3D G3DSA:3.40.50.2000 182 376 3.5E-64 T 22-04-2016 RM25_RS04780 49bdb87e97f425964eb9b7841e8e1ea0 398 Pfam PF00982 Glycosyltransferase family 20 3 392 4.2E-124 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 RM25_RS01390 88006b7624c0f101e6af475cac96964a 221 Gene3D G3DSA:3.40.50.850 15 145 3.0E-19 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RM25_RS01390 88006b7624c0f101e6af475cac96964a 221 PANTHER PTHR14119:SF1 16 145 5.5E-42 T 22-04-2016 RM25_RS01390 88006b7624c0f101e6af475cac96964a 221 Pfam PF00857 Isochorismatase family 24 145 1.2E-13 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RM25_RS01390 88006b7624c0f101e6af475cac96964a 221 PANTHER PTHR14119 16 145 5.5E-42 T 22-04-2016 RM25_RS01390 88006b7624c0f101e6af475cac96964a 221 SUPERFAMILY SSF52499 15 145 2.88E-25 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RM25_RS07860 ae295fa3374a58864b855d9bd7c4c700 437 Pfam PF13936 Helix-turn-helix domain 48 91 6.1E-19 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RM25_RS07860 ae295fa3374a58864b855d9bd7c4c700 437 PANTHER PTHR10948 44 118 7.5E-77 T 22-04-2016 RM25_RS07860 ae295fa3374a58864b855d9bd7c4c700 437 PANTHER PTHR10948 152 292 7.5E-77 T 22-04-2016 RM25_RS07860 ae295fa3374a58864b855d9bd7c4c700 437 PANTHER PTHR10948 311 435 7.5E-77 T 22-04-2016 RM25_RS07860 ae295fa3374a58864b855d9bd7c4c700 437 SUPERFAMILY SSF53098 259 425 2.12E-21 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS07860 ae295fa3374a58864b855d9bd7c4c700 437 Gene3D G3DSA:1.10.10.60 48 80 1.3E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS07860 ae295fa3374a58864b855d9bd7c4c700 437 Gene3D G3DSA:3.30.420.10 326 423 2.3E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10740 ae295fa3374a58864b855d9bd7c4c700 437 Pfam PF13936 Helix-turn-helix domain 48 91 6.1E-19 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RM25_RS10740 ae295fa3374a58864b855d9bd7c4c700 437 PANTHER PTHR10948 44 118 7.5E-77 T 22-04-2016 RM25_RS10740 ae295fa3374a58864b855d9bd7c4c700 437 PANTHER PTHR10948 152 292 7.5E-77 T 22-04-2016 RM25_RS10740 ae295fa3374a58864b855d9bd7c4c700 437 PANTHER PTHR10948 311 435 7.5E-77 T 22-04-2016 RM25_RS10740 ae295fa3374a58864b855d9bd7c4c700 437 SUPERFAMILY SSF53098 259 425 2.12E-21 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10740 ae295fa3374a58864b855d9bd7c4c700 437 Gene3D G3DSA:1.10.10.60 48 80 1.3E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10740 ae295fa3374a58864b855d9bd7c4c700 437 Gene3D G3DSA:3.30.420.10 326 423 2.3E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10480 b7d56eaf97281c41202bb94e69e2db46 290 Gene3D G3DSA:3.40.50.1000 197 276 2.0E-43 T 22-04-2016 IPR023214 HAD-like domain RM25_RS10480 b7d56eaf97281c41202bb94e69e2db46 290 Gene3D G3DSA:3.40.50.1000 19 94 2.0E-43 T 22-04-2016 IPR023214 HAD-like domain RM25_RS10480 b7d56eaf97281c41202bb94e69e2db46 290 Gene3D G3DSA:3.40.50.10410 99 196 1.3E-22 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain RM25_RS10480 b7d56eaf97281c41202bb94e69e2db46 290 Pfam PF13242 HAD-hyrolase-like 199 273 3.1E-20 T 22-04-2016 RM25_RS10480 b7d56eaf97281c41202bb94e69e2db46 290 PANTHER PTHR19288:SF3 7 284 3.5E-76 T 22-04-2016 RM25_RS10480 b7d56eaf97281c41202bb94e69e2db46 290 Pfam PF13344 Haloacid dehalogenase-like hydrolase 21 121 4.6E-24 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA RM25_RS10480 b7d56eaf97281c41202bb94e69e2db46 290 PANTHER PTHR19288 7 284 3.5E-76 T 22-04-2016 RM25_RS10480 b7d56eaf97281c41202bb94e69e2db46 290 SUPERFAMILY SSF56784 19 275 3.12E-59 T 22-04-2016 IPR023214 HAD-like domain RM25_RS10480 b7d56eaf97281c41202bb94e69e2db46 290 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 22 248 7.7E-33 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA RM25_RS10090 50f330d38257e57610de4ee6f9a1fcb8 1458 Gene3D G3DSA:3.30.420.40 98 236 2.1E-43 T 22-04-2016 RM25_RS10090 50f330d38257e57610de4ee6f9a1fcb8 1458 Gene3D G3DSA:3.30.420.40 415 556 6.9E-46 T 22-04-2016 RM25_RS10090 50f330d38257e57610de4ee6f9a1fcb8 1458 PANTHER PTHR32329 6 1422 0.0 T 22-04-2016 RM25_RS10090 50f330d38257e57610de4ee6f9a1fcb8 1458 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 671 888 2.2E-72 T 22-04-2016 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 RM25_RS10090 50f330d38257e57610de4ee6f9a1fcb8 1458 SUPERFAMILY SSF53067 7 257 2.82E-47 T 22-04-2016 RM25_RS10090 50f330d38257e57610de4ee6f9a1fcb8 1458 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 907 1236 1.3E-40 T 22-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit RM25_RS10090 50f330d38257e57610de4ee6f9a1fcb8 1458 SUPERFAMILY SSF53067 318 574 3.72E-40 T 22-04-2016 RM25_RS10090 50f330d38257e57610de4ee6f9a1fcb8 1458 PANTHER PTHR32329:SF4 6 1422 0.0 T 22-04-2016 RM25_RS10090 50f330d38257e57610de4ee6f9a1fcb8 1458 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 320 574 1.3E-32 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type RM25_RS10090 50f330d38257e57610de4ee6f9a1fcb8 1458 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 8 257 1.2E-19 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type RM25_RS04540 3b73df755ecfa1ced83832194eab4ca1 389 PANTHER PTHR11061 12 386 1.1E-80 T 22-04-2016 RM25_RS04540 3b73df755ecfa1ced83832194eab4ca1 389 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 311 385 3.8E-10 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 RM25_RS04540 3b73df755ecfa1ced83832194eab4ca1 389 SUPERFAMILY SSF53335 70 387 5.82E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS04540 3b73df755ecfa1ced83832194eab4ca1 389 Gene3D G3DSA:3.40.50.150 203 386 7.3E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS04540 3b73df755ecfa1ced83832194eab4ca1 389 PANTHER PTHR11061:SF30 12 386 1.1E-80 T 22-04-2016 RM25_RS04540 3b73df755ecfa1ced83832194eab4ca1 389 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 370 380 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site RM25_RS04540 3b73df755ecfa1ced83832194eab4ca1 389 Gene3D G3DSA:2.40.50.140 11 81 6.7E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS04540 3b73df755ecfa1ced83832194eab4ca1 389 Pfam PF01938 TRAM domain 14 61 4.9E-8 T 22-04-2016 IPR002792 TRAM domain RM25_RS04540 3b73df755ecfa1ced83832194eab4ca1 389 SUPERFAMILY SSF50249 12 68 1.37E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS03855 25770968cbb83c8cecff0e30ef917c4d 211 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 9 200 38.875 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RM25_RS03855 25770968cbb83c8cecff0e30ef917c4d 211 PANTHER PTHR10381:SF22 27 199 9.7E-98 T 22-04-2016 RM25_RS03855 25770968cbb83c8cecff0e30ef917c4d 211 SUPERFAMILY SSF52096 26 199 3.32E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS03855 25770968cbb83c8cecff0e30ef917c4d 211 PANTHER PTHR10381 27 199 9.7E-98 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RM25_RS03855 25770968cbb83c8cecff0e30ef917c4d 211 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 22-04-2016 IPR033135 ClpP, histidine active site RM25_RS03855 25770968cbb83c8cecff0e30ef917c4d 211 Pfam PF00574 Clp protease 25 199 1.7E-74 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RM25_RS03855 25770968cbb83c8cecff0e30ef917c4d 211 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 9.9E-46 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RM25_RS03855 25770968cbb83c8cecff0e30ef917c4d 211 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 9.9E-46 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RM25_RS03855 25770968cbb83c8cecff0e30ef917c4d 211 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 9.9E-46 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RM25_RS03855 25770968cbb83c8cecff0e30ef917c4d 211 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 9.9E-46 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RM25_RS03855 25770968cbb83c8cecff0e30ef917c4d 211 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 9.9E-46 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RM25_RS03855 25770968cbb83c8cecff0e30ef917c4d 211 Gene3D G3DSA:3.90.226.10 26 201 3.1E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS06385 d5796e5c940f765cb36dc12f63f08a5a 255 SMART SM00363 19 78 4.5E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS06385 d5796e5c940f765cb36dc12f63f08a5a 255 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 117 131 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RM25_RS06385 d5796e5c940f765cb36dc12f63f08a5a 255 Pfam PF00849 RNA pseudouridylate synthase 81 211 9.8E-18 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS06385 d5796e5c940f765cb36dc12f63f08a5a 255 SUPERFAMILY SSF55174 15 84 9.42E-14 T 22-04-2016 RM25_RS06385 d5796e5c940f765cb36dc12f63f08a5a 255 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 85 242 2.4E-47 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RM25_RS06385 d5796e5c940f765cb36dc12f63f08a5a 255 SUPERFAMILY SSF55120 77 254 1.27E-41 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS06385 d5796e5c940f765cb36dc12f63f08a5a 255 Gene3D G3DSA:3.10.290.10 17 82 1.3E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS06385 d5796e5c940f765cb36dc12f63f08a5a 255 PANTHER PTHR21600 15 255 3.6E-81 T 22-04-2016 RM25_RS06385 d5796e5c940f765cb36dc12f63f08a5a 255 PANTHER PTHR21600:SF2 15 255 3.6E-81 T 22-04-2016 RM25_RS06385 d5796e5c940f765cb36dc12f63f08a5a 255 Pfam PF01479 S4 domain 20 62 1.1E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PANTHER PTHR11922 3 189 1.6E-79 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 Pfam PF00117 Glutamine amidotransferase class-I 6 189 1.4E-53 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PANTHER PTHR11922:SF7 3 189 1.6E-79 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PRINTS PR00097 Anthranilate synthase component II signature 4 18 4.2E-32 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PRINTS PR00097 Anthranilate synthase component II signature 122 134 4.2E-32 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PRINTS PR00097 Anthranilate synthase component II signature 77 88 4.2E-32 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PRINTS PR00097 Anthranilate synthase component II signature 102 110 4.2E-32 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PRINTS PR00097 Anthranilate synthase component II signature 50 59 4.2E-32 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PRINTS PR00097 Anthranilate synthase component II signature 168 181 4.2E-32 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 2.5E-9 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 2.5E-9 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 189 3.3E-65 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 5.5E-13 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 5.5E-13 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 5.5E-13 T 22-04-2016 RM25_RS01045 a1828393220029b0c52f977d376c071e 214 SUPERFAMILY SSF52317 1 192 7.98E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS01045 a1828393220029b0c52f977d376c071e 214 Gene3D G3DSA:3.40.50.880 2 192 1.1E-66 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS04525 161d4767acaeaa6a98b0676ab8dbb499 222 SUPERFAMILY SSF116726 133 214 4.58E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RM25_RS04525 161d4767acaeaa6a98b0676ab8dbb499 222 Gene3D G3DSA:3.30.70.1450 148 216 2.6E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RM25_RS04525 161d4767acaeaa6a98b0676ab8dbb499 222 PRINTS PR00335 TrkA potassium uptake protein signature 59 69 2.9E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RM25_RS04525 161d4767acaeaa6a98b0676ab8dbb499 222 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.9E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RM25_RS04525 161d4767acaeaa6a98b0676ab8dbb499 222 PRINTS PR00335 TrkA potassium uptake protein signature 72 86 2.9E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RM25_RS04525 161d4767acaeaa6a98b0676ab8dbb499 222 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.9E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RM25_RS04525 161d4767acaeaa6a98b0676ab8dbb499 222 Pfam PF02080 TrkA-C domain 149 212 2.6E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RM25_RS04525 161d4767acaeaa6a98b0676ab8dbb499 222 Gene3D G3DSA:3.40.50.720 1 132 2.7E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04525 161d4767acaeaa6a98b0676ab8dbb499 222 SUPERFAMILY SSF51735 1 144 1.34E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04525 161d4767acaeaa6a98b0676ab8dbb499 222 PANTHER PTHR16254 1 159 1.9E-25 T 22-04-2016 RM25_RS04525 161d4767acaeaa6a98b0676ab8dbb499 222 Pfam PF02254 TrkA-N domain 4 118 6.9E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RM25_RS06280 8596b3340322951515bfaca53f367bf6 94 Pfam PF00936 BMC domain 4 79 6.4E-28 T 22-04-2016 IPR000249 Microcompartment protein, bacteria RM25_RS06280 8596b3340322951515bfaca53f367bf6 94 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 22-04-2016 IPR020808 Bacterial microcompartments protein, conserved site RM25_RS06280 8596b3340322951515bfaca53f367bf6 94 SUPERFAMILY SSF143414 3 89 4.05E-32 T 22-04-2016 RM25_RS06280 8596b3340322951515bfaca53f367bf6 94 SMART SM00877 3 79 5.1E-36 T 22-04-2016 IPR000249 Microcompartment protein, bacteria RM25_RS06280 8596b3340322951515bfaca53f367bf6 94 PANTHER PTHR33941 1 88 4.5E-43 T 22-04-2016 RM25_RS06280 8596b3340322951515bfaca53f367bf6 94 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 47 2.0E-14 T 22-04-2016 RM25_RS11940 994aed157283cb60e377ea2e365b233d 351 Pfam PF00781 Diacylglycerol kinase catalytic domain 52 161 5.4E-16 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RM25_RS11940 994aed157283cb60e377ea2e365b233d 351 SMART SM00046 41 166 0.0063 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RM25_RS11940 994aed157283cb60e377ea2e365b233d 351 PANTHER PTHR12358 71 330 7.1E-18 T 22-04-2016 RM25_RS11940 994aed157283cb60e377ea2e365b233d 351 SUPERFAMILY SSF111331 39 332 9.59E-50 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RM25_RS03550 014433533ee57577468fcc90e90d9acb 253 Gene3D G3DSA:3.30.230.70 10 245 3.4E-31 T 22-04-2016 IPR027408 PNPase/RNase PH domain RM25_RS03550 014433533ee57577468fcc90e90d9acb 253 PANTHER PTHR11953:SF0 10 244 2.3E-73 T 22-04-2016 RM25_RS03550 014433533ee57577468fcc90e90d9acb 253 Pfam PF01138 3' exoribonuclease family, domain 1 18 148 1.2E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RM25_RS03550 014433533ee57577468fcc90e90d9acb 253 SUPERFAMILY SSF54211 9 189 1.11E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS03550 014433533ee57577468fcc90e90d9acb 253 Pfam PF03725 3' exoribonuclease family, domain 2 166 231 1.8E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RM25_RS03550 014433533ee57577468fcc90e90d9acb 253 PANTHER PTHR11953 10 244 2.3E-73 T 22-04-2016 RM25_RS03550 014433533ee57577468fcc90e90d9acb 253 SUPERFAMILY SSF55666 159 247 3.53E-22 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RM25_RS03550 014433533ee57577468fcc90e90d9acb 253 ProSitePatterns PS01277 Ribonuclease PH signature. 124 136 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site RM25_RS03550 014433533ee57577468fcc90e90d9acb 253 Hamap MF_00564 Ribonuclease PH [rph]. 9 245 45.492 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RM25_RS03550 014433533ee57577468fcc90e90d9acb 253 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 10 244 1.1E-109 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RM25_RS09275 0b85fd39b216d81ab32eec4f7660bb02 159 Gene3D G3DSA:3.40.140.10 12 157 4.2E-56 T 22-04-2016 RM25_RS09275 0b85fd39b216d81ab32eec4f7660bb02 159 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 63 100 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RM25_RS09275 0b85fd39b216d81ab32eec4f7660bb02 159 Pfam PF14437 MafB19-like deaminase 13 158 1.1E-33 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RM25_RS09275 0b85fd39b216d81ab32eec4f7660bb02 159 PANTHER PTHR11079 17 159 7.0E-41 T 22-04-2016 RM25_RS09275 0b85fd39b216d81ab32eec4f7660bb02 159 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 17 159 47.872 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RM25_RS09275 0b85fd39b216d81ab32eec4f7660bb02 159 SUPERFAMILY SSF53927 15 158 1.9E-50 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RM25_RS08180 30884f7675b8c7dd9e26c175cd065336 292 PANTHER PTHR21091 1 228 1.4E-66 T 22-04-2016 RM25_RS08180 30884f7675b8c7dd9e26c175cd065336 292 Gene3D G3DSA:3.40.1010.10 9 117 8.5E-9 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RM25_RS08180 30884f7675b8c7dd9e26c175cd065336 292 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 210 7.2E-30 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS08180 30884f7675b8c7dd9e26c175cd065336 292 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 8 228 32.174 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS08180 30884f7675b8c7dd9e26c175cd065336 292 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 9 278 9.2E-64 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS08180 30884f7675b8c7dd9e26c175cd065336 292 Gene3D G3DSA:3.30.950.10 118 229 2.2E-41 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RM25_RS08180 30884f7675b8c7dd9e26c175cd065336 292 PIRSF PIRSF005917 1 282 8.4E-86 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS08180 30884f7675b8c7dd9e26c175cd065336 292 SUPERFAMILY SSF53790 7 226 3.4E-70 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS08180 30884f7675b8c7dd9e26c175cd065336 292 PANTHER PTHR21091:SF18 1 228 1.4E-66 T 22-04-2016 RM25_RS00895 333e7d99c50cb8f779586d0147a7478f 394 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 12 379 1.9E-91 T 22-04-2016 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase GO:0016813 RM25_RS00895 333e7d99c50cb8f779586d0147a7478f 394 Pfam PF07687 Peptidase dimerisation domain 183 290 7.2E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS00895 333e7d99c50cb8f779586d0147a7478f 394 Gene3D G3DSA:3.40.630.10 329 390 6.0E-65 T 22-04-2016 RM25_RS00895 333e7d99c50cb8f779586d0147a7478f 394 Gene3D G3DSA:3.40.630.10 8 195 6.0E-65 T 22-04-2016 RM25_RS00895 333e7d99c50cb8f779586d0147a7478f 394 PANTHER PTHR11014 8 394 3.0E-91 T 22-04-2016 RM25_RS00895 333e7d99c50cb8f779586d0147a7478f 394 Gene3D G3DSA:3.30.70.360 196 288 9.0E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS00895 333e7d99c50cb8f779586d0147a7478f 394 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 77 86 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RM25_RS00895 333e7d99c50cb8f779586d0147a7478f 394 SUPERFAMILY SSF53187 305 390 6.01E-62 T 22-04-2016 RM25_RS00895 333e7d99c50cb8f779586d0147a7478f 394 SUPERFAMILY SSF53187 8 186 6.01E-62 T 22-04-2016 RM25_RS00895 333e7d99c50cb8f779586d0147a7478f 394 SUPERFAMILY SSF55031 186 300 6.28E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS00895 333e7d99c50cb8f779586d0147a7478f 394 Pfam PF01546 Peptidase family M20/M25/M40 78 386 2.0E-37 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RM25_RS08140 a42a578dd1bd1e42711893f8f5592b7e 219 Gene3D G3DSA:2.40.240.10 3 94 3.7E-28 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RM25_RS08140 a42a578dd1bd1e42711893f8f5592b7e 219 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 91 2.0E-25 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RM25_RS08140 a42a578dd1bd1e42711893f8f5592b7e 219 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 177 24.991 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RM25_RS08140 a42a578dd1bd1e42711893f8f5592b7e 219 Pfam PF01386 Ribosomal L25p family 6 91 2.5E-24 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RM25_RS08140 a42a578dd1bd1e42711893f8f5592b7e 219 SUPERFAMILY SSF50715 4 182 5.93E-45 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RM25_RS08140 a42a578dd1bd1e42711893f8f5592b7e 219 PANTHER PTHR33284 1 205 2.1E-50 T 22-04-2016 RM25_RS08140 a42a578dd1bd1e42711893f8f5592b7e 219 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 177 8.6E-17 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain RM25_RS08140 a42a578dd1bd1e42711893f8f5592b7e 219 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 174 8.5E-39 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RM25_RS08140 a42a578dd1bd1e42711893f8f5592b7e 219 Gene3D G3DSA:2.170.120.20 96 183 5.4E-18 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain RM25_RS08955 3cd9ae515f3b69558742d04757a6a142 290 PANTHER PTHR39193:SF1 4 287 1.1E-75 T 22-04-2016 RM25_RS08955 3cd9ae515f3b69558742d04757a6a142 290 Pfam PF04962 KduI/IolB family 14 273 3.7E-83 T 22-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 RM25_RS08955 3cd9ae515f3b69558742d04757a6a142 290 SUPERFAMILY SSF51182 22 256 1.53E-59 T 22-04-2016 IPR011051 RmlC-like cupin domain RM25_RS08955 3cd9ae515f3b69558742d04757a6a142 290 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 23 274 1.3E-87 T 22-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 RM25_RS08955 3cd9ae515f3b69558742d04757a6a142 290 Gene3D G3DSA:2.60.120.10 123 279 7.6E-60 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RM25_RS08955 3cd9ae515f3b69558742d04757a6a142 290 PANTHER PTHR39193 4 287 1.1E-75 T 22-04-2016 RM25_RS08955 3cd9ae515f3b69558742d04757a6a142 290 Gene3D G3DSA:2.60.120.10 21 122 4.5E-27 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RM25_RS08955 3cd9ae515f3b69558742d04757a6a142 290 PIRSF PIRSF036628 8 279 6.4E-77 T 22-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 RM25_RS03235 3a3750a2aa1d80b3c51ba8e011353b5c 307 PANTHER PTHR11085 30 171 3.9E-92 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 RM25_RS03235 3a3750a2aa1d80b3c51ba8e011353b5c 307 PANTHER PTHR11085 191 299 3.9E-92 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 RM25_RS03235 3a3750a2aa1d80b3c51ba8e011353b5c 307 Gene3D G3DSA:3.40.50.1220 29 57 1.3E-36 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS03235 3a3750a2aa1d80b3c51ba8e011353b5c 307 Gene3D G3DSA:3.40.50.1220 103 147 1.3E-36 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS03235 3a3750a2aa1d80b3c51ba8e011353b5c 307 Gene3D G3DSA:3.40.50.1220 233 299 1.3E-36 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS03235 3a3750a2aa1d80b3c51ba8e011353b5c 307 Pfam PF02146 Sir2 family 49 253 5.2E-34 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 RM25_RS03235 3a3750a2aa1d80b3c51ba8e011353b5c 307 SUPERFAMILY SSF52467 13 163 1.17E-69 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS03235 3a3750a2aa1d80b3c51ba8e011353b5c 307 SUPERFAMILY SSF52467 191 300 1.17E-69 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS03235 3a3750a2aa1d80b3c51ba8e011353b5c 307 Gene3D G3DSA:3.30.1600.10 58 93 3.3E-17 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain RM25_RS03235 3a3750a2aa1d80b3c51ba8e011353b5c 307 Gene3D G3DSA:3.30.1600.10 148 223 3.3E-17 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain RM25_RS03235 3a3750a2aa1d80b3c51ba8e011353b5c 307 PANTHER PTHR11085:SF22 30 171 3.9E-92 T 22-04-2016 RM25_RS03235 3a3750a2aa1d80b3c51ba8e011353b5c 307 PANTHER PTHR11085:SF22 191 299 3.9E-92 T 22-04-2016 RM25_RS10110 8a3d41417fa168de834d2bc562497327 210 Pfam PF12804 MobA-like NTP transferase domain 20 176 8.1E-20 T 22-04-2016 IPR025877 MobA-like NTP transferase RM25_RS10110 8a3d41417fa168de834d2bc562497327 210 SUPERFAMILY SSF53448 18 202 1.62E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS10110 8a3d41417fa168de834d2bc562497327 210 Gene3D G3DSA:3.90.550.10 17 207 2.5E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS03645 1a86e73d51baa27a127d69a15b3ca7e1 99 Pfam PF12277 Protein of unknown function (DUF3618) 7 50 9.2E-6 T 22-04-2016 IPR022062 Protein of unknown function DUF3618 RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 SUPERFAMILY SSF52518 3 333 5.44E-97 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 Gene3D G3DSA:3.40.50.920 560 686 2.0E-45 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 PANTHER PTHR11624:SF1 352 686 4.3E-301 T 22-04-2016 RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 PANTHER PTHR11624:SF1 6 327 4.3E-301 T 22-04-2016 RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 Pfam PF02780 Transketolase, C-terminal domain 571 678 8.2E-11 T 22-04-2016 IPR033248 Transketolase, C-terminal domain RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 Gene3D G3DSA:3.40.50.970 347 552 2.8E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 TIGRFAM TIGR00232 tktlase_bact: transketolase 12 685 2.3E-227 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 351 3.6E-123 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 ProSitePatterns PS00802 Transketolase signature 2. 486 502 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 Pfam PF02779 Transketolase, pyrimidine binding domain 364 543 1.9E-44 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 SUPERFAMILY SSF52922 554 687 1.31E-41 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 SUPERFAMILY SSF52518 361 546 1.93E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 ProSitePatterns PS00801 Transketolase signature 1. 18 38 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 SMART SM00861 364 544 5.3E-68 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 PANTHER PTHR11624 352 686 4.3E-301 T 22-04-2016 IPR033247 Transketolase family RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 PANTHER PTHR11624 6 327 4.3E-301 T 22-04-2016 IPR033247 Transketolase family RM25_RS10460 a8ee99e34327187a57d6970ffe34d2e5 688 Gene3D G3DSA:3.40.50.970 7 337 2.7E-103 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 SUPERFAMILY SSF49493 211 285 5.76E-17 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 SUPERFAMILY SSF49493 142 166 5.76E-17 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 Gene3D G3DSA:2.10.230.10 170 234 1.5E-17 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 Pfam PF00684 DnaJ central domain 175 232 1.4E-11 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 Gene3D G3DSA:2.60.260.20 127 169 3.8E-21 T 22-04-2016 RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 Gene3D G3DSA:2.60.260.20 235 279 3.8E-21 T 22-04-2016 RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 7 384 35.484 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 Gene3D G3DSA:2.60.260.20 282 358 5.2E-19 T 22-04-2016 RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 SMART SM00271 9 67 9.0E-25 T 22-04-2016 IPR001623 DnaJ domain RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 PANTHER PTHR24078:SF190 8 386 2.3E-107 T 22-04-2016 RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 SUPERFAMILY SSF49493 284 368 3.79E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 Pfam PF01556 DnaJ C terminal domain 150 358 1.8E-36 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 PANTHER PTHR24078 8 386 2.3E-107 T 22-04-2016 RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 ProSitePatterns PS00636 Nt-dnaJ domain signature. 52 71 - T 22-04-2016 IPR018253 DnaJ domain, conserved site RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 Gene3D G3DSA:1.10.287.110 5 96 3.3E-28 T 22-04-2016 IPR001623 DnaJ domain RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 Pfam PF00226 DnaJ domain 10 72 5.5E-24 T 22-04-2016 IPR001623 DnaJ domain RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 SUPERFAMILY SSF46565 9 105 1.57E-27 T 22-04-2016 IPR001623 DnaJ domain RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 PRINTS PR00625 DnaJ domain signature 67 86 1.5E-20 T 22-04-2016 IPR001623 DnaJ domain RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 PRINTS PR00625 DnaJ domain signature 47 67 1.5E-20 T 22-04-2016 IPR001623 DnaJ domain RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 PRINTS PR00625 DnaJ domain signature 30 45 1.5E-20 T 22-04-2016 IPR001623 DnaJ domain RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 PRINTS PR00625 DnaJ domain signature 12 30 1.5E-20 T 22-04-2016 IPR001623 DnaJ domain RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 10 373 3.3E-114 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RM25_RS02105 9f1e9073852ea8f26cb03e96cc46b9da 390 SUPERFAMILY SSF57938 162 234 2.62E-16 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RM25_RS06495 1d8f3e8cd764340497ce755c709dbba9 407 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 229 266 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS06495 1d8f3e8cd764340497ce755c709dbba9 407 Gene3D G3DSA:3.90.1150.10 296 403 3.1E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS06495 1d8f3e8cd764340497ce755c709dbba9 407 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 20 402 41.561 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RM25_RS06495 1d8f3e8cd764340497ce755c709dbba9 407 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 23 401 7.2E-133 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RM25_RS06495 1d8f3e8cd764340497ce755c709dbba9 407 PANTHER PTHR11986:SF79 11 407 1.3E-158 T 22-04-2016 RM25_RS06495 1d8f3e8cd764340497ce755c709dbba9 407 Gene3D G3DSA:3.40.640.10 66 295 1.5E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS06495 1d8f3e8cd764340497ce755c709dbba9 407 Pfam PF00202 Aminotransferase class-III 31 397 3.1E-105 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS06495 1d8f3e8cd764340497ce755c709dbba9 407 PANTHER PTHR11986 11 407 1.3E-158 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS06495 1d8f3e8cd764340497ce755c709dbba9 407 SUPERFAMILY SSF53383 23 401 4.81E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 SUPERFAMILY SSF47323 323 466 1.44E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 PANTHER PTHR10890 4 464 3.2E-185 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 SUPERFAMILY SSF52374 5 316 2.57E-81 T 22-04-2016 RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 Pfam PF09190 DALR domain 346 401 2.2E-11 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 467 34.661 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 Gene3D G3DSA:1.20.120.640 311 398 3.2E-16 T 22-04-2016 RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 SMART SM00840 346 408 2.4E-15 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 Gene3D G3DSA:3.40.50.620 21 309 3.4E-92 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 5.9E-24 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 196 214 5.9E-24 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 5.9E-24 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 5.9E-24 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 465 3.8E-132 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RM25_RS08755 7308b9deca6387f08a8d7c53597164a5 467 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 317 1.3E-110 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RM25_RS02705 6e617a6a24c746eccc7926018cba9237 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 5 144 6.7E-43 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RM25_RS02705 6e617a6a24c746eccc7926018cba9237 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 147 19.672 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 RM25_RS02705 6e617a6a24c746eccc7926018cba9237 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 145 8.1E-33 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P RM25_RS02705 6e617a6a24c746eccc7926018cba9237 147 PANTHER PTHR12934 8 146 1.3E-53 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RM25_RS02705 6e617a6a24c746eccc7926018cba9237 147 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02705 6e617a6a24c746eccc7926018cba9237 147 Gene3D G3DSA:3.100.10.10 34 146 7.5E-34 T 22-04-2016 RM25_RS02705 6e617a6a24c746eccc7926018cba9237 147 SUPERFAMILY SSF52080 8 146 7.72E-39 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P RM25_RS05390 d8efe6d0ea205c82d4dbd8b5a05f470b 216 Gene3D G3DSA:3.10.580.10 2 131 5.3E-33 T 22-04-2016 RM25_RS05390 d8efe6d0ea205c82d4dbd8b5a05f470b 216 Pfam PF01842 ACT domain 142 177 3.9E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RM25_RS05390 d8efe6d0ea205c82d4dbd8b5a05f470b 216 PANTHER PTHR11911 1 168 4.5E-31 T 22-04-2016 RM25_RS05390 d8efe6d0ea205c82d4dbd8b5a05f470b 216 SUPERFAMILY SSF55021 140 205 1.28E-8 T 22-04-2016 RM25_RS05390 d8efe6d0ea205c82d4dbd8b5a05f470b 216 SMART SM00116 84 131 1.6E-9 T 22-04-2016 IPR000644 CBS domain RM25_RS05390 d8efe6d0ea205c82d4dbd8b5a05f470b 216 SMART SM00116 10 57 9.9E-10 T 22-04-2016 IPR000644 CBS domain RM25_RS05390 d8efe6d0ea205c82d4dbd8b5a05f470b 216 PANTHER PTHR11911:SF104 1 168 4.5E-31 T 22-04-2016 RM25_RS05390 d8efe6d0ea205c82d4dbd8b5a05f470b 216 SUPERFAMILY SSF54631 1 132 3.66E-33 T 22-04-2016 RM25_RS05390 d8efe6d0ea205c82d4dbd8b5a05f470b 216 Gene3D G3DSA:3.30.70.260 141 198 1.5E-7 T 22-04-2016 RM25_RS05390 d8efe6d0ea205c82d4dbd8b5a05f470b 216 Pfam PF00571 CBS domain 77 129 2.2E-11 T 22-04-2016 IPR000644 CBS domain RM25_RS05390 d8efe6d0ea205c82d4dbd8b5a05f470b 216 Pfam PF00571 CBS domain 4 56 6.0E-11 T 22-04-2016 IPR000644 CBS domain RM25_RS03775 d2dc9581046a73443e8fb5fc3d51e1bb 629 ProSitePatterns PS00455 Putative AMP-binding domain signature. 201 212 - T 22-04-2016 IPR020845 AMP-binding, conserved site RM25_RS03775 d2dc9581046a73443e8fb5fc3d51e1bb 629 PANTHER PTHR24096:SF193 20 619 8.5E-163 T 22-04-2016 RM25_RS03775 d2dc9581046a73443e8fb5fc3d51e1bb 629 Pfam PF00501 AMP-binding enzyme 20 484 2.3E-90 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RM25_RS03775 d2dc9581046a73443e8fb5fc3d51e1bb 629 Gene3D G3DSA:3.30.300.30 484 604 4.3E-4 T 22-04-2016 RM25_RS03775 d2dc9581046a73443e8fb5fc3d51e1bb 629 Gene3D G3DSA:3.40.50.980 186 207 2.5E-31 T 22-04-2016 RM25_RS03775 d2dc9581046a73443e8fb5fc3d51e1bb 629 Gene3D G3DSA:3.40.50.980 18 154 2.5E-31 T 22-04-2016 RM25_RS03775 d2dc9581046a73443e8fb5fc3d51e1bb 629 Gene3D G3DSA:3.40.50.980 352 415 6.7E-26 T 22-04-2016 RM25_RS03775 d2dc9581046a73443e8fb5fc3d51e1bb 629 Gene3D G3DSA:3.40.50.980 208 300 6.7E-26 T 22-04-2016 RM25_RS03775 d2dc9581046a73443e8fb5fc3d51e1bb 629 PANTHER PTHR24096 20 619 8.5E-163 T 22-04-2016 RM25_RS03775 d2dc9581046a73443e8fb5fc3d51e1bb 629 Gene3D G3DSA:2.30.38.10 424 478 3.3E-20 T 22-04-2016 RM25_RS03775 d2dc9581046a73443e8fb5fc3d51e1bb 629 SUPERFAMILY SSF56801 14 305 4.84E-114 T 22-04-2016 RM25_RS03775 d2dc9581046a73443e8fb5fc3d51e1bb 629 SUPERFAMILY SSF56801 355 624 4.84E-114 T 22-04-2016 RM25_RS06040 ee5b95c2244a45fa5357aa5cc87f0e03 141 Pfam PF11253 Protein of unknown function (DUF3052) 16 136 5.9E-45 T 22-04-2016 IPR021412 Protein of unknown function DUF3052 RM25_RS03845 4f500f5e8fd4e1d11e647e2c34fe6b50 397 Pfam PF01594 Domain of unknown function DUF20 58 368 3.3E-37 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RM25_RS03845 4f500f5e8fd4e1d11e647e2c34fe6b50 397 PANTHER PTHR21716 33 370 1.2E-38 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RM25_RS02305 d15500fc9a96ab8ba988315c16ac5c55 589 TIGRFAM TIGR03491 TIGR03491: putative RecB family nuclease, TM0106 family 284 585 1.5E-39 T 22-04-2016 IPR019993 RecB family nuclease, TM0106, putative RM25_RS02305 d15500fc9a96ab8ba988315c16ac5c55 589 Pfam PF13482 RNase_H superfamily 403 585 2.6E-17 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10550 83743d12a5374ea936ddb3ccd82d072f 313 PANTHER PTHR30349 12 298 5.8E-50 T 22-04-2016 RM25_RS10550 83743d12a5374ea936ddb3ccd82d072f 313 SUPERFAMILY SSF47823 14 104 7.46E-8 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal RM25_RS10550 83743d12a5374ea936ddb3ccd82d072f 313 Gene3D G3DSA:1.10.150.130 14 104 4.8E-14 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RM25_RS10550 83743d12a5374ea936ddb3ccd82d072f 313 Pfam PF00589 Phage integrase family 129 292 1.8E-28 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS10550 83743d12a5374ea936ddb3ccd82d072f 313 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 98 6.4E-12 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RM25_RS10550 83743d12a5374ea936ddb3ccd82d072f 313 PANTHER PTHR30349:SF5 12 298 5.8E-50 T 22-04-2016 RM25_RS10550 83743d12a5374ea936ddb3ccd82d072f 313 Gene3D G3DSA:1.10.443.10 127 296 9.0E-41 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS10550 83743d12a5374ea936ddb3ccd82d072f 313 SUPERFAMILY SSF56349 120 299 3.24E-41 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RM25_RS07815 972aaaa27510d9bd2eb4fa00fe2dd70c 231 Pfam PF01323 DSBA-like thioredoxin domain 15 216 1.1E-46 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RM25_RS07815 972aaaa27510d9bd2eb4fa00fe2dd70c 231 SUPERFAMILY SSF52833 14 223 2.94E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS07815 972aaaa27510d9bd2eb4fa00fe2dd70c 231 PANTHER PTHR13887:SF10 11 231 6.9E-53 T 22-04-2016 RM25_RS07815 972aaaa27510d9bd2eb4fa00fe2dd70c 231 Gene3D G3DSA:3.40.30.10 12 220 3.9E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS07815 972aaaa27510d9bd2eb4fa00fe2dd70c 231 PANTHER PTHR13887 11 231 6.9E-53 T 22-04-2016 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 PANTHER PTHR13697 3 242 3.1E-96 T 22-04-2016 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 PANTHER PTHR13697 276 360 3.1E-96 T 22-04-2016 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 SUPERFAMILY SSF53784 3 364 4.45E-106 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 372 41.62 T 22-04-2016 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 101 117 5.1E-51 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 33 46 5.1E-51 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 128 145 5.1E-51 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 146 164 5.1E-51 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 166 182 5.1E-51 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 220 232 5.1E-51 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 184 201 5.1E-51 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 5.1E-51 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 Gene3D G3DSA:3.40.50.450 3 219 1.7E-64 T 22-04-2016 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 PIRSF PIRSF000532 1 373 4.6E-109 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 RM25_RS03880 fd179e4a134377a27cc344446e3d5fae 373 Pfam PF00365 Phosphofructokinase 4 321 2.4E-86 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS09355 ed3652b21e7e46c5c145c588e6c8a100 279 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 153 5.3E-27 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RM25_RS09355 ed3652b21e7e46c5c145c588e6c8a100 279 PANTHER PTHR22981 1 219 3.1E-36 T 22-04-2016 RM25_RS09355 ed3652b21e7e46c5c145c588e6c8a100 279 Gene3D G3DSA:1.10.1040.10 161 221 5.8E-7 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RM25_RS09355 ed3652b21e7e46c5c145c588e6c8a100 279 SUPERFAMILY SSF48179 160 220 2.72E-7 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RM25_RS09355 ed3652b21e7e46c5c145c588e6c8a100 279 SUPERFAMILY SSF51735 1 153 3.77E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS09355 ed3652b21e7e46c5c145c588e6c8a100 279 Gene3D G3DSA:3.40.50.720 1 152 3.3E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 Pfam PF01189 16S rRNA methyltransferase RsmB/F 251 437 2.7E-38 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 SUPERFAMILY SSF48013 4 154 7.85E-30 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 PANTHER PTHR22807 14 439 9.5E-64 T 22-04-2016 RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 369 385 2.9E-20 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 421 438 2.9E-20 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 220 234 2.9E-20 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 252 262 2.9E-20 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 319 331 2.9E-20 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 Pfam PF01029 NusB family 4 125 1.1E-22 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 Gene3D G3DSA:3.40.50.150 237 438 3.1E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 SUPERFAMILY SSF53335 150 439 1.46E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 PANTHER PTHR22807:SF30 14 439 9.5E-64 T 22-04-2016 RM25_RS05185 73b222f78666fb197b5607b4f9edb9d5 439 Gene3D G3DSA:1.10.940.10 2 155 1.6E-39 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RM25_RS04710 0c6a08d943d3d3a4ea2648e2ba2839c6 143 Pfam PF02577 Bifunctional nuclease 4 116 6.9E-20 T 22-04-2016 IPR003729 Bifunctional nuclease domain GO:0004518 RM25_RS04710 0c6a08d943d3d3a4ea2648e2ba2839c6 143 SUPERFAMILY SSF103256 3 125 9.81E-18 T 22-04-2016 IPR003729 Bifunctional nuclease domain GO:0004518 RM25_RS02170 f48808888dc2fd0eaeaab486f562aabd 76 Pfam PF11273 Protein of unknown function (DUF3073) 2 62 1.3E-20 T 22-04-2016 IPR021426 Protein of unknown function DUF3073 RM25_RS05585 82581c9500135d9ccdf644409464a02f 184 SUPERFAMILY SSF81573 78 135 7.32E-7 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RM25_RS05585 82581c9500135d9ccdf644409464a02f 184 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 31 172 4.8E-22 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 RM25_RS05585 82581c9500135d9ccdf644409464a02f 184 Gene3D G3DSA:1.20.5.620 78 135 1.3E-8 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RM25_RS05585 82581c9500135d9ccdf644409464a02f 184 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 172 10.955 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RM25_RS05585 82581c9500135d9ccdf644409464a02f 184 Pfam PF00430 ATP synthase B/B' CF(0) 26 151 1.5E-18 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 PRINTS PR00395 Ribosomal protein S2 signature 159 176 3.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 PRINTS PR00395 Ribosomal protein S2 signature 176 187 3.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 PRINTS PR00395 Ribosomal protein S2 signature 197 211 3.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 Gene3D G3DSA:1.10.287.610 100 153 2.6E-20 T 22-04-2016 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 Gene3D G3DSA:3.40.50.10490 159 241 7.8E-67 T 22-04-2016 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 Gene3D G3DSA:3.40.50.10490 23 99 7.8E-67 T 22-04-2016 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 226 41.152 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 Pfam PF00318 Ribosomal protein S2 9 225 2.0E-95 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 PANTHER PTHR12534 1 270 1.0E-110 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 3.3E-104 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RM25_RS06895 4bd5b5e933b267f9da9dfdcefea58122 325 SUPERFAMILY SSF52313 7 229 4.97E-89 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain RM25_RS04425 7a577a53704ec4899f5637cb6e71ca0e 876 Gene3D G3DSA:3.40.50.970 11 362 2.2E-23 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS04425 7a577a53704ec4899f5637cb6e71ca0e 876 Pfam PF09363 XFP C-terminal domain 586 788 1.6E-79 T 22-04-2016 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 RM25_RS04425 7a577a53704ec4899f5637cb6e71ca0e 876 PANTHER PTHR31273 7 793 0.0 T 22-04-2016 RM25_RS04425 7a577a53704ec4899f5637cb6e71ca0e 876 SUPERFAMILY SSF52518 7 368 8.54E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS04425 7a577a53704ec4899f5637cb6e71ca0e 876 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 401 575 5.2E-78 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 RM25_RS04425 7a577a53704ec4899f5637cb6e71ca0e 876 PANTHER PTHR31273:SF0 7 793 0.0 T 22-04-2016 RM25_RS04425 7a577a53704ec4899f5637cb6e71ca0e 876 Pfam PF09364 XFP N-terminal domain 10 385 1.7E-170 T 22-04-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal RM25_RS04425 7a577a53704ec4899f5637cb6e71ca0e 876 ProSitePatterns PS60002 Phosphoketolase signature 1. 143 149 - T 22-04-2016 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 RM25_RS04425 7a577a53704ec4899f5637cb6e71ca0e 876 ProSitePatterns PS60003 Phosphoketolase signature 2. 156 174 - T 22-04-2016 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 RM25_RS04425 7a577a53704ec4899f5637cb6e71ca0e 876 SUPERFAMILY SSF52518 377 592 5.89E-22 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS00610 00abf6789b5b5630fca076afcd16a86c 501 Gene3D G3DSA:3.40.50.200 16 68 9.7E-29 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RM25_RS00610 00abf6789b5b5630fca076afcd16a86c 501 Gene3D G3DSA:3.40.50.200 102 352 9.7E-29 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RM25_RS00610 00abf6789b5b5630fca076afcd16a86c 501 Pfam PF00082 Subtilase family 33 340 7.9E-15 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RM25_RS00610 00abf6789b5b5630fca076afcd16a86c 501 PRINTS PR00723 Subtilisin serine protease family (S8) signature 290 306 8.7E-5 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RM25_RS00610 00abf6789b5b5630fca076afcd16a86c 501 PRINTS PR00723 Subtilisin serine protease family (S8) signature 33 52 8.7E-5 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RM25_RS00610 00abf6789b5b5630fca076afcd16a86c 501 SUPERFAMILY SSF52743 100 352 3.4E-28 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RM25_RS00610 00abf6789b5b5630fca076afcd16a86c 501 SUPERFAMILY SSF52743 15 54 3.4E-28 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RM25_RS06815 7d024e79f9365d2ff65f8b9800d57b03 298 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 8 297 17.216 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS06815 7d024e79f9365d2ff65f8b9800d57b03 298 PANTHER PTHR13767:SF2 1 297 7.9E-102 T 22-04-2016 RM25_RS06815 7d024e79f9365d2ff65f8b9800d57b03 298 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 9 218 1.2E-66 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS06815 7d024e79f9365d2ff65f8b9800d57b03 298 Pfam PF09142 tRNA Pseudouridine synthase II, C terminal 241 297 5.1E-10 T 22-04-2016 IPR015225 tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS06815 7d024e79f9365d2ff65f8b9800d57b03 298 SUPERFAMILY SSF55120 9 222 1.39E-67 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS06815 7d024e79f9365d2ff65f8b9800d57b03 298 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 30 182 2.2E-50 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 RM25_RS06815 7d024e79f9365d2ff65f8b9800d57b03 298 PANTHER PTHR13767 1 297 7.9E-102 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS06815 7d024e79f9365d2ff65f8b9800d57b03 298 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 183 220 3.9E-9 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal RM25_RS07630 f65629349d384de474aab84262353927 474 Gene3D G3DSA:1.20.200.10 146 409 2.4E-99 T 22-04-2016 RM25_RS07630 f65629349d384de474aab84262353927 474 Pfam PF10415 Fumarase C C-terminus 415 467 4.8E-23 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RM25_RS07630 f65629349d384de474aab84262353927 474 PRINTS PR00145 Argininosuccinate lyase family signature 181 201 6.2E-9 T 22-04-2016 RM25_RS07630 f65629349d384de474aab84262353927 474 PRINTS PR00145 Argininosuccinate lyase family signature 140 162 6.2E-9 T 22-04-2016 RM25_RS07630 f65629349d384de474aab84262353927 474 PRINTS PR00145 Argininosuccinate lyase family signature 323 339 6.2E-9 T 22-04-2016 RM25_RS07630 f65629349d384de474aab84262353927 474 Hamap MF_00743 Fumarate hydratase class II [fumC]. 9 468 85.336 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RM25_RS07630 f65629349d384de474aab84262353927 474 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 10 465 1.4E-213 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RM25_RS07630 f65629349d384de474aab84262353927 474 ProSitePatterns PS00163 Fumarate lyases signature. 323 332 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RM25_RS07630 f65629349d384de474aab84262353927 474 PANTHER PTHR11444 1 468 8.6E-230 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07630 f65629349d384de474aab84262353927 474 Gene3D G3DSA:1.10.40.30 411 469 1.9E-29 T 22-04-2016 RM25_RS07630 f65629349d384de474aab84262353927 474 Gene3D G3DSA:1.10.275.10 8 145 2.9E-59 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RM25_RS07630 f65629349d384de474aab84262353927 474 SUPERFAMILY SSF48557 9 466 8.98E-153 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RM25_RS07630 f65629349d384de474aab84262353927 474 Pfam PF00206 Lyase 17 348 1.0E-105 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RM25_RS07630 f65629349d384de474aab84262353927 474 PRINTS PR00149 Fumarate lyase superfamily signature 186 204 4.0E-34 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07630 f65629349d384de474aab84262353927 474 PRINTS PR00149 Fumarate lyase superfamily signature 323 339 4.0E-34 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07630 f65629349d384de474aab84262353927 474 PRINTS PR00149 Fumarate lyase superfamily signature 141 159 4.0E-34 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07630 f65629349d384de474aab84262353927 474 PRINTS PR00149 Fumarate lyase superfamily signature 277 304 4.0E-34 T 22-04-2016 IPR000362 Fumarate lyase family RM25_RS07630 f65629349d384de474aab84262353927 474 PANTHER PTHR11444:SF1 1 468 8.6E-230 T 22-04-2016 RM25_RS06215 89a0993b5e8f15bb6397ccce527a7c85 469 Gene3D G3DSA:3.40.309.10 254 425 7.6E-23 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RM25_RS06215 89a0993b5e8f15bb6397ccce527a7c85 469 Pfam PF00171 Aldehyde dehydrogenase family 38 421 3.5E-28 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RM25_RS06215 89a0993b5e8f15bb6397ccce527a7c85 469 PANTHER PTHR11699 1 423 4.4E-135 T 22-04-2016 RM25_RS06215 89a0993b5e8f15bb6397ccce527a7c85 469 SUPERFAMILY SSF53720 324 435 5.11E-61 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RM25_RS06215 89a0993b5e8f15bb6397ccce527a7c85 469 SUPERFAMILY SSF53720 39 296 5.11E-61 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RM25_RS06215 89a0993b5e8f15bb6397ccce527a7c85 469 PANTHER PTHR11699:SF68 1 423 4.4E-135 T 22-04-2016 RM25_RS06215 89a0993b5e8f15bb6397ccce527a7c85 469 Gene3D G3DSA:3.40.605.10 38 253 4.2E-27 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RM25_RS06215 89a0993b5e8f15bb6397ccce527a7c85 469 PIRSF PIRSF036410 3 469 1.7E-203 T 22-04-2016 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related UniPathway: UPA00560 RM25_RS07230 103ca10b7bb92c984e1c455f0b44898b 262 Gene3D G3DSA:3.60.140.10 14 258 2.9E-67 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RM25_RS07230 103ca10b7bb92c984e1c455f0b44898b 262 SUPERFAMILY SSF64438 12 258 2.38E-57 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic RM25_RS07230 103ca10b7bb92c984e1c455f0b44898b 262 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 21 256 1.5E-55 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RM25_RS07230 103ca10b7bb92c984e1c455f0b44898b 262 PANTHER PTHR30616 16 80 1.7E-54 T 22-04-2016 RM25_RS07230 103ca10b7bb92c984e1c455f0b44898b 262 PANTHER PTHR30616 96 259 1.7E-54 T 22-04-2016 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 488 535 6.4E-9 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 Gene3D G3DSA:3.40.120.10 308 443 6.0E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 207 314 3.0E-12 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 318 437 1.3E-25 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 Gene3D G3DSA:3.30.310.50 464 542 8.0E-27 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 SUPERFAMILY SSF53738 24 232 2.03E-43 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 SUPERFAMILY SSF55957 431 542 2.62E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 PANTHER PTHR22573:SF52 17 541 1.0E-237 T 22-04-2016 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 Gene3D G3DSA:3.40.120.10 222 307 5.9E-40 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 PANTHER PTHR22573 17 541 1.0E-237 T 22-04-2016 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 SUPERFAMILY SSF53738 206 314 1.88E-8 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 Gene3D G3DSA:3.40.120.10 28 221 1.9E-50 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 1.2E-29 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 SUPERFAMILY SSF53738 303 445 1.37E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RM25_RS05505 da9c9e3a605e14f790f366dbf459c6fc 543 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 542 9.6E-257 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 RM25_RS06410 7cb12b9ea2ffc1797c3a949f24bda9c9 300 PANTHER PTHR30349 1 298 6.0E-92 T 22-04-2016 RM25_RS06410 7cb12b9ea2ffc1797c3a949f24bda9c9 300 PANTHER PTHR30349:SF5 1 298 6.0E-92 T 22-04-2016 RM25_RS06410 7cb12b9ea2ffc1797c3a949f24bda9c9 300 SUPERFAMILY SSF47823 1 92 3.53E-12 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal RM25_RS06410 7cb12b9ea2ffc1797c3a949f24bda9c9 300 Gene3D G3DSA:1.10.150.130 1 95 4.8E-25 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RM25_RS06410 7cb12b9ea2ffc1797c3a949f24bda9c9 300 SUPERFAMILY SSF56349 102 293 4.12E-55 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RM25_RS06410 7cb12b9ea2ffc1797c3a949f24bda9c9 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 1 85 6.0E-18 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RM25_RS06410 7cb12b9ea2ffc1797c3a949f24bda9c9 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 298 30.239 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RM25_RS06410 7cb12b9ea2ffc1797c3a949f24bda9c9 300 Gene3D G3DSA:1.10.443.10 107 291 6.8E-56 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS06410 7cb12b9ea2ffc1797c3a949f24bda9c9 300 Pfam PF00589 Phage integrase family 108 284 8.3E-46 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS03575 2e15b50ca7586e25e6ae68653e4c14f3 337 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 19 316 2.1E-104 T 22-04-2016 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 RM25_RS03575 2e15b50ca7586e25e6ae68653e4c14f3 337 Gene3D G3DSA:1.20.5.170 4 54 5.4E-20 T 22-04-2016 RM25_RS03575 2e15b50ca7586e25e6ae68653e4c14f3 337 PANTHER PTHR23408:SF17 3 325 2.1E-140 T 22-04-2016 RM25_RS03575 2e15b50ca7586e25e6ae68653e4c14f3 337 Pfam PF03308 ArgK protein 22 293 4.0E-106 T 22-04-2016 RM25_RS03575 2e15b50ca7586e25e6ae68653e4c14f3 337 SUPERFAMILY SSF52540 6 313 2.46E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03575 2e15b50ca7586e25e6ae68653e4c14f3 337 PANTHER PTHR23408 3 325 2.1E-140 T 22-04-2016 RM25_RS03575 2e15b50ca7586e25e6ae68653e4c14f3 337 Gene3D G3DSA:3.40.50.300 55 259 3.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08170 80ba76cf1846ad8b48e99c3c0c29a98e 286 SMART SM00650 35 209 9.8E-64 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RM25_RS08170 80ba76cf1846ad8b48e99c3c0c29a98e 286 Gene3D G3DSA:3.40.50.150 6 210 2.0E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS08170 80ba76cf1846ad8b48e99c3c0c29a98e 286 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 280 48.194 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RM25_RS08170 80ba76cf1846ad8b48e99c3c0c29a98e 286 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 278 2.7E-69 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RM25_RS08170 80ba76cf1846ad8b48e99c3c0c29a98e 286 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 51 78 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 RM25_RS08170 80ba76cf1846ad8b48e99c3c0c29a98e 286 Pfam PF00398 Ribosomal RNA adenine dimethylase 23 277 2.3E-39 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RM25_RS08170 80ba76cf1846ad8b48e99c3c0c29a98e 286 Gene3D G3DSA:1.10.8.100 214 279 2.7E-20 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like RM25_RS08170 80ba76cf1846ad8b48e99c3c0c29a98e 286 SUPERFAMILY SSF53335 19 279 1.21E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS08170 80ba76cf1846ad8b48e99c3c0c29a98e 286 PANTHER PTHR11727 9 279 4.5E-75 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RM25_RS02720 4b0dc7c76757f82e84fc51531526b150 575 Gene3D G3DSA:3.10.105.10 325 537 1.5E-35 T 22-04-2016 RM25_RS02720 4b0dc7c76757f82e84fc51531526b150 575 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 115 482 1.7E-54 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RM25_RS02720 4b0dc7c76757f82e84fc51531526b150 575 SUPERFAMILY SSF53850 54 556 1.81E-78 T 22-04-2016 RM25_RS02720 4b0dc7c76757f82e84fc51531526b150 575 Gene3D G3DSA:3.40.190.10 183 324 4.1E-28 T 22-04-2016 RM25_RS02720 4b0dc7c76757f82e84fc51531526b150 575 PANTHER PTHR30290 1 551 1.6E-70 T 22-04-2016 RM25_RS02720 4b0dc7c76757f82e84fc51531526b150 575 Gene3D G3DSA:3.90.76.10 94 182 2.5E-8 T 22-04-2016 RM25_RS02720 4b0dc7c76757f82e84fc51531526b150 575 PIRSF PIRSF002741 5 562 5.6E-52 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 136 4.8E-11 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 SUPERFAMILY SSF54909 63 141 7.24E-13 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 SMART SM00344 1 107 9.0E-30 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 PANTHER PTHR30154:SF2 1 148 1.7E-37 T 22-04-2016 RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.1E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.1E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.1E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 PANTHER PTHR30154 1 148 1.7E-37 T 22-04-2016 RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 SUPERFAMILY SSF46785 3 88 3.69E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 2.7E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 Gene3D G3DSA:3.30.70.920 54 133 3.7E-16 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RM25_RS05320 5abd29f739671cf50455a29031f83ee8 154 Gene3D G3DSA:1.10.10.10 3 53 8.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03360 5c4e4ee6278fdc4bc3eae48ec4ab477a 309 PANTHER PTHR24220:SF160 6 218 2.2E-92 T 22-04-2016 RM25_RS03360 5c4e4ee6278fdc4bc3eae48ec4ab477a 309 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS03360 5c4e4ee6278fdc4bc3eae48ec4ab477a 309 SUPERFAMILY SSF52540 4 218 3.8E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03360 5c4e4ee6278fdc4bc3eae48ec4ab477a 309 PANTHER PTHR24220 6 218 2.2E-92 T 22-04-2016 RM25_RS03360 5c4e4ee6278fdc4bc3eae48ec4ab477a 309 SMART SM00382 29 215 3.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS03360 5c4e4ee6278fdc4bc3eae48ec4ab477a 309 Pfam PF00005 ABC transporter 20 159 9.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS03360 5c4e4ee6278fdc4bc3eae48ec4ab477a 309 Gene3D G3DSA:3.40.50.300 3 223 1.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02625 f52e4c9383920f40832417df802b0861 278 SMART SM01383 42 119 1.0E-42 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02625 f52e4c9383920f40832417df802b0861 278 Gene3D G3DSA:2.30.30.30 120 196 2.9E-30 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RM25_RS02625 f52e4c9383920f40832417df802b0861 278 PIRSF PIRSF002158 3 275 2.2E-96 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02625 f52e4c9383920f40832417df802b0861 278 SUPERFAMILY SSF50249 2 126 1.34E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS02625 f52e4c9383920f40832417df802b0861 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.4E-34 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02625 f52e4c9383920f40832417df802b0861 278 Gene3D G3DSA:2.40.50.140 1 114 2.6E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS02625 f52e4c9383920f40832417df802b0861 278 SUPERFAMILY SSF50104 127 271 4.03E-56 T 22-04-2016 IPR008991 Translation protein SH3-like domain RM25_RS02625 f52e4c9383920f40832417df802b0861 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.861 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RM25_RS02625 f52e4c9383920f40832417df802b0861 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 6.6E-55 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RM25_RS02625 f52e4c9383920f40832417df802b0861 278 PANTHER PTHR13691 1 278 6.7E-141 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02625 f52e4c9383920f40832417df802b0861 278 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 RM25_RS02625 f52e4c9383920f40832417df802b0861 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 7.0E-130 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RM25_RS02625 f52e4c9383920f40832417df802b0861 278 SMART SM01382 125 253 4.7E-88 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RM25_RS02625 f52e4c9383920f40832417df802b0861 278 Gene3D G3DSA:4.10.950.10 197 273 1.9E-32 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 RM25_RS04180 08cebd31b711afa389cdc89e5d278e34 229 Gene3D G3DSA:3.40.1180.10 1 225 1.7E-84 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RM25_RS04180 08cebd31b711afa389cdc89e5d278e34 229 PANTHER PTHR10291 1 227 8.7E-101 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RM25_RS04180 08cebd31b711afa389cdc89e5d278e34 229 PANTHER PTHR10291:SF0 1 227 8.7E-101 T 22-04-2016 RM25_RS04180 08cebd31b711afa389cdc89e5d278e34 229 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 166 183 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 RM25_RS04180 08cebd31b711afa389cdc89e5d278e34 229 Pfam PF01255 Putative undecaprenyl diphosphate synthase 1 220 2.7E-73 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RM25_RS04180 08cebd31b711afa389cdc89e5d278e34 229 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 1 220 2.8E-69 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RM25_RS04180 08cebd31b711afa389cdc89e5d278e34 229 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 1 221 33.549 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RM25_RS04180 08cebd31b711afa389cdc89e5d278e34 229 SUPERFAMILY SSF64005 1 215 2.62E-76 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RM25_RS07995 e2ab189e09932480f2669c3fcf0623b9 215 PANTHER PTHR34071 2 192 2.4E-22 T 22-04-2016 RM25_RS07995 e2ab189e09932480f2669c3fcf0623b9 215 PANTHER PTHR34071:SF2 2 192 2.4E-22 T 22-04-2016 RM25_RS07995 e2ab189e09932480f2669c3fcf0623b9 215 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 15 152 9.8E-26 T 22-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related RM25_RS07995 e2ab189e09932480f2669c3fcf0623b9 215 Gene3D G3DSA:2.30.110.10 3 183 1.4E-42 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RM25_RS07995 e2ab189e09932480f2669c3fcf0623b9 215 SUPERFAMILY SSF50475 3 172 1.32E-36 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RM25_RS06870 4a2bc1bcb8bdbf47b4d5d0907f07fb29 366 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 14 362 3.5E-95 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS06870 4a2bc1bcb8bdbf47b4d5d0907f07fb29 366 Gene3D G3DSA:3.20.20.70 107 337 1.9E-14 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS06870 4a2bc1bcb8bdbf47b4d5d0907f07fb29 366 SUPERFAMILY SSF102114 106 336 1.11E-14 T 22-04-2016 RM25_RS06870 4a2bc1bcb8bdbf47b4d5d0907f07fb29 366 PIRSF PIRSF006004 11 366 9.9E-116 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS06870 4a2bc1bcb8bdbf47b4d5d0907f07fb29 366 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 11 365 64.589 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS06870 4a2bc1bcb8bdbf47b4d5d0907f07fb29 366 Pfam PF04055 Radical SAM superfamily 119 289 2.8E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RM25_RS06870 4a2bc1bcb8bdbf47b4d5d0907f07fb29 366 PANTHER PTHR30544 8 366 3.8E-148 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS06870 4a2bc1bcb8bdbf47b4d5d0907f07fb29 366 PANTHER PTHR30544:SF5 8 366 3.8E-148 T 22-04-2016 RM25_RS00865 b81179aa7d0dda67513b2255be9dcd65 124 PANTHER PTHR10516 4 123 6.3E-48 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RM25_RS00865 b81179aa7d0dda67513b2255be9dcd65 124 SUPERFAMILY SSF54534 5 123 1.55E-41 T 22-04-2016 RM25_RS00865 b81179aa7d0dda67513b2255be9dcd65 124 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 30 120 8.3E-33 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RM25_RS00865 b81179aa7d0dda67513b2255be9dcd65 124 Gene3D G3DSA:3.10.50.40 14 123 2.6E-44 T 22-04-2016 RM25_RS07550 4b24a923d07485fa68350b0622601521 187 Pfam PF06210 Protein of unknown function (DUF1003) 44 145 2.4E-36 T 22-04-2016 IPR010406 Protein of unknown function DUF1003 RM25_RS07550 4b24a923d07485fa68350b0622601521 187 PANTHER PTHR41386:SF1 3 172 2.1E-39 T 22-04-2016 RM25_RS07550 4b24a923d07485fa68350b0622601521 187 PANTHER PTHR41386 3 172 2.1E-39 T 22-04-2016 RM25_RS06235 44f3fa3e73e42e56265caf91265a9119 285 Pfam PF00012 Hsp70 protein 86 182 5.3E-10 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS06235 44f3fa3e73e42e56265caf91265a9119 285 PANTHER PTHR32432 38 276 4.2E-28 T 22-04-2016 RM25_RS06235 44f3fa3e73e42e56265caf91265a9119 285 Gene3D G3DSA:3.30.420.40 23 158 1.9E-27 T 22-04-2016 RM25_RS06235 44f3fa3e73e42e56265caf91265a9119 285 SUPERFAMILY SSF53067 38 278 3.44E-22 T 22-04-2016 RM25_RS06235 44f3fa3e73e42e56265caf91265a9119 285 Gene3D G3DSA:3.30.420.40 159 262 2.7E-30 T 22-04-2016 RM25_RS06235 44f3fa3e73e42e56265caf91265a9119 285 SMART SM00842 39 145 0.0038 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RM25_RS06235 44f3fa3e73e42e56265caf91265a9119 285 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 41 278 2.9E-86 T 22-04-2016 IPR013366 Ethanolamine utilisation EutJ UniPathway: UPA00560 RM25_RS01040 0828d7e0d05cae8b56bd194f4cb13fb8 244 PANTHER PTHR37313 10 244 2.6E-50 T 22-04-2016 RM25_RS01040 0828d7e0d05cae8b56bd194f4cb13fb8 244 PANTHER PTHR37313:SF2 10 244 2.6E-50 T 22-04-2016 RM25_RS01040 0828d7e0d05cae8b56bd194f4cb13fb8 244 Pfam PF05949 Bacterial protein of unknown function (DUF881) 93 240 1.9E-39 T 22-04-2016 IPR010273 Protein of unknown function DUF881 RM25_RS02660 d7cd08071d156cdb16cac9cd6bc50b84 123 Gene3D G3DSA:2.40.150.20 1 123 5.3E-50 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RM25_RS02660 d7cd08071d156cdb16cac9cd6bc50b84 123 PANTHER PTHR11761 1 123 3.2E-72 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RM25_RS02660 d7cd08071d156cdb16cac9cd6bc50b84 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site RM25_RS02660 d7cd08071d156cdb16cac9cd6bc50b84 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 2.6E-55 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 RM25_RS02660 d7cd08071d156cdb16cac9cd6bc50b84 123 SMART SM01374 1 123 6.2E-82 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RM25_RS02660 d7cd08071d156cdb16cac9cd6bc50b84 123 SUPERFAMILY SSF50193 2 122 8.11E-48 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RM25_RS02660 d7cd08071d156cdb16cac9cd6bc50b84 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 26.125 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RM25_RS02660 d7cd08071d156cdb16cac9cd6bc50b84 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.1E-52 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RM25_RS11715 2e8d26c38b5093d53501217be10e0a81 397 PANTHER PTHR11669 2 378 2.0E-150 T 22-04-2016 RM25_RS11715 2e8d26c38b5093d53501217be10e0a81 397 Gene3D G3DSA:3.40.50.300 29 181 2.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11715 2e8d26c38b5093d53501217be10e0a81 397 SMART SM00382 51 199 1.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS11715 2e8d26c38b5093d53501217be10e0a81 397 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 19 377 5.8E-120 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 RM25_RS11715 2e8d26c38b5093d53501217be10e0a81 397 PANTHER PTHR11669:SF0 2 378 2.0E-150 T 22-04-2016 RM25_RS11715 2e8d26c38b5093d53501217be10e0a81 397 SUPERFAMILY SSF52540 46 236 8.24E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11715 2e8d26c38b5093d53501217be10e0a81 397 Gene3D G3DSA:1.10.8.60 182 259 4.0E-22 T 22-04-2016 RM25_RS11715 2e8d26c38b5093d53501217be10e0a81 397 Pfam PF13177 DNA polymerase III, delta subunit 35 192 1.5E-38 T 22-04-2016 RM25_RS11715 2e8d26c38b5093d53501217be10e0a81 397 SUPERFAMILY SSF48019 262 378 4.51E-19 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RM25_RS11715 2e8d26c38b5093d53501217be10e0a81 397 Gene3D G3DSA:1.20.272.10 260 378 6.7E-14 T 22-04-2016 RM25_RS11715 2e8d26c38b5093d53501217be10e0a81 397 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 249 378 2.4E-10 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 RM25_RS11900 844a1807a985e40c3ae50decd226fcba 346 SUPERFAMILY SSF51261 177 342 8.37E-51 T 22-04-2016 IPR011055 Duplicated hybrid motif RM25_RS11900 844a1807a985e40c3ae50decd226fcba 346 Gene3D G3DSA:2.70.70.10 215 345 1.0E-45 T 22-04-2016 RM25_RS11900 844a1807a985e40c3ae50decd226fcba 346 PANTHER PTHR21666 223 342 1.8E-41 T 22-04-2016 RM25_RS11900 844a1807a985e40c3ae50decd226fcba 346 Pfam PF01551 Peptidase family M23 246 340 1.0E-28 T 22-04-2016 IPR016047 Peptidase M23 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 2.3E-245 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 PANTHER PTHR11353 1 528 5.1E-215 T 22-04-2016 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 SUPERFAMILY SSF48592 372 522 8.7E-29 T 22-04-2016 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 Hamap MF_00600 60 kDa chaperonin [groL]. 1 530 39.851 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 Gene3D G3DSA:1.10.560.10 3 186 1.9E-45 T 22-04-2016 IPR027413 GroEL-like equatorial domain RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 1.2E-95 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 Gene3D G3DSA:3.50.7.10 187 367 9.9E-95 T 22-04-2016 IPR027409 GroEL-like apical domain RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 PRINTS PR00298 60kDa chaperonin signature 82 109 1.2E-68 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 PRINTS PR00298 60kDa chaperonin signature 396 417 1.2E-68 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 PRINTS PR00298 60kDa chaperonin signature 266 289 1.2E-68 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 PRINTS PR00298 60kDa chaperonin signature 348 373 1.2E-68 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 PRINTS PR00298 60kDa chaperonin signature 26 52 1.2E-68 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 SUPERFAMILY SSF52029 183 374 9.87E-79 T 22-04-2016 IPR027409 GroEL-like apical domain RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 SUPERFAMILY SSF48592 1 227 1.57E-66 T 22-04-2016 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 RM25_RS02990 3c6edfedee30169a3ccac73e4e5d3e5b 530 Gene3D G3DSA:1.10.560.10 368 515 3.0E-38 T 22-04-2016 IPR027413 GroEL-like equatorial domain RM25_RS04770 3e23c66362167b3735620692bcdcb5a9 357 Pfam PF03186 CobD/Cbib protein 31 314 2.1E-81 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RM25_RS04770 3e23c66362167b3735620692bcdcb5a9 357 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 27 336 75.394 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RM25_RS04770 3e23c66362167b3735620692bcdcb5a9 357 PANTHER PTHR34308 19 340 2.3E-82 T 22-04-2016 RM25_RS04770 3e23c66362167b3735620692bcdcb5a9 357 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 30 291 2.0E-50 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RM25_RS04770 3e23c66362167b3735620692bcdcb5a9 357 PANTHER PTHR34308:SF1 19 340 2.3E-82 T 22-04-2016 RM25_RS02400 88739c882f86018c7f37b168d8fef133 518 PANTHER PTHR22773 126 518 4.4E-154 T 22-04-2016 RM25_RS02400 88739c882f86018c7f37b168d8fef133 518 PANTHER PTHR22773 1 102 4.4E-154 T 22-04-2016 RM25_RS02400 88739c882f86018c7f37b168d8fef133 518 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 507 17.331 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RM25_RS02400 88739c882f86018c7f37b168d8fef133 518 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 123 506 5.9E-111 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RM25_RS02400 88739c882f86018c7f37b168d8fef133 518 Pfam PF00361 Proton-conducting membrane transporter 150 456 4.6E-66 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RM25_RS02400 88739c882f86018c7f37b168d8fef133 518 PANTHER PTHR22773:SF41 126 518 4.4E-154 T 22-04-2016 RM25_RS02400 88739c882f86018c7f37b168d8fef133 518 PANTHER PTHR22773:SF41 1 102 4.4E-154 T 22-04-2016 RM25_RS06735 71280c22452a7054813a5e61e70d84b7 240 SUPERFAMILY SSF54768 119 229 5.66E-24 T 22-04-2016 RM25_RS06735 71280c22452a7054813a5e61e70d84b7 240 SMART SM00535 25 157 6.4E-54 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RM25_RS06735 71280c22452a7054813a5e61e70d84b7 240 Gene3D G3DSA:3.30.160.20 162 229 7.4E-23 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RM25_RS06735 71280c22452a7054813a5e61e70d84b7 240 ProSitePatterns PS00517 Ribonuclease III family signature. 47 55 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RM25_RS06735 71280c22452a7054813a5e61e70d84b7 240 Pfam PF14622 Ribonuclease-III-like 23 149 5.1E-35 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RM25_RS06735 71280c22452a7054813a5e61e70d84b7 240 SMART SM00358 164 230 4.3E-17 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RM25_RS06735 71280c22452a7054813a5e61e70d84b7 240 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 23 226 4.1E-67 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RM25_RS06735 71280c22452a7054813a5e61e70d84b7 240 Gene3D G3DSA:1.10.1520.10 12 153 1.0E-40 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RM25_RS06735 71280c22452a7054813a5e61e70d84b7 240 PANTHER PTHR11207 8 231 6.5E-65 T 22-04-2016 RM25_RS06735 71280c22452a7054813a5e61e70d84b7 240 Hamap MF_00104 Ribonuclease 3 [rnc]. 14 226 28.58 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RM25_RS06735 71280c22452a7054813a5e61e70d84b7 240 SUPERFAMILY SSF69065 10 165 1.13E-43 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RM25_RS06735 71280c22452a7054813a5e61e70d84b7 240 Pfam PF00035 Double-stranded RNA binding motif 164 229 1.3E-14 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 SUPERFAMILY SSF51735 131 220 4.23E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 SUPERFAMILY SSF51735 1 90 4.23E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 PIRSF PIRSF500134 123 477 1.4E-97 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 243 335 2.0E-29 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 PIRSF PIRSF000124 123 476 3.0E-77 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 130 216 1.2E-14 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 89 1.0E-21 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 SUPERFAMILY SSF48179 242 331 2.04E-25 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 SUPERFAMILY SSF52413 351 471 1.83E-30 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 Gene3D G3DSA:3.40.50.720 273 477 1.2E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 SMART SM00984 360 461 7.5E-33 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 Gene3D G3DSA:3.40.50.720 127 245 3.3E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 Gene3D G3DSA:3.40.50.720 1 87 3.3E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 Gene3D G3DSA:1.20.5.100 246 271 1.4E-15 T 22-04-2016 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 129 457 3.6E-75 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 360 461 3.3E-23 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 PANTHER PTHR11374 129 476 7.5E-147 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 PANTHER PTHR11374 1 93 7.5E-147 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 PANTHER PTHR11374:SF18 129 476 7.5E-147 T 22-04-2016 RM25_RS01150 0a2e1eed730568dd81d22b71a3cac0ad 477 PANTHER PTHR11374:SF18 1 93 7.5E-147 T 22-04-2016 RM25_RS02460 ca7db76050a4c3fe01a2cac6dd39e458 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 2 187 1.8E-97 T 22-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RM25_RS02460 ca7db76050a4c3fe01a2cac6dd39e458 187 PIRSF PIRSF000239 1 187 1.8E-51 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RM25_RS02460 ca7db76050a4c3fe01a2cac6dd39e458 187 PANTHER PTHR10681:SF121 2 187 9.0E-85 T 22-04-2016 RM25_RS02460 ca7db76050a4c3fe01a2cac6dd39e458 187 Pfam PF00578 AhpC/TSA family 5 133 3.8E-32 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RM25_RS02460 ca7db76050a4c3fe01a2cac6dd39e458 187 Gene3D G3DSA:3.40.30.10 4 183 9.3E-59 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS02460 ca7db76050a4c3fe01a2cac6dd39e458 187 SUPERFAMILY SSF52833 3 186 5.61E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS02460 ca7db76050a4c3fe01a2cac6dd39e458 187 PANTHER PTHR10681 2 187 9.0E-85 T 22-04-2016 RM25_RS03155 724a3054ee262f8d1329e71fc10c0b65 203 PANTHER PTHR10520 3 188 2.8E-63 T 22-04-2016 RM25_RS03155 724a3054ee262f8d1329e71fc10c0b65 203 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 140 163 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RM25_RS03155 724a3054ee262f8d1329e71fc10c0b65 203 Pfam PF00551 Formyl transferase 4 187 2.0E-49 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RM25_RS03155 724a3054ee262f8d1329e71fc10c0b65 203 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 194 27.266 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 RM25_RS03155 724a3054ee262f8d1329e71fc10c0b65 203 Gene3D G3DSA:3.40.50.170 4 195 4.0E-63 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RM25_RS03155 724a3054ee262f8d1329e71fc10c0b65 203 SUPERFAMILY SSF53328 4 194 2.49E-52 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RM25_RS03155 724a3054ee262f8d1329e71fc10c0b65 203 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 194 3.0E-61 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 RM25_RS10960 0e9fa3fe9a842bff08354a8f8b72b315 347 Gene3D G3DSA:1.10.260.40 5 56 1.3E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS10960 0e9fa3fe9a842bff08354a8f8b72b315 347 SUPERFAMILY SSF53822 61 307 1.83E-40 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RM25_RS10960 0e9fa3fe9a842bff08354a8f8b72b315 347 SMART SM00354 4 74 1.4E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RM25_RS10960 0e9fa3fe9a842bff08354a8f8b72b315 347 Pfam PF13377 Periplasmic binding protein-like domain 170 308 8.2E-20 T 22-04-2016 RM25_RS10960 0e9fa3fe9a842bff08354a8f8b72b315 347 SUPERFAMILY SSF47413 5 62 2.95E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS10960 0e9fa3fe9a842bff08354a8f8b72b315 347 Gene3D G3DSA:3.40.50.2300 173 304 1.7E-21 T 22-04-2016 RM25_RS10960 0e9fa3fe9a842bff08354a8f8b72b315 347 Gene3D G3DSA:3.40.50.2300 57 172 1.3E-29 T 22-04-2016 RM25_RS10960 0e9fa3fe9a842bff08354a8f8b72b315 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 51 4.8E-12 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RM25_RS10960 0e9fa3fe9a842bff08354a8f8b72b315 347 PANTHER PTHR30146 5 307 2.5E-58 T 22-04-2016 RM25_RS10960 0e9fa3fe9a842bff08354a8f8b72b315 347 PANTHER PTHR30146 323 347 2.5E-58 T 22-04-2016 RM25_RS06440 5e57c81c794be2138b0a4cfdc10a941b 202 Pfam PF02361 Cobalt transport protein 26 199 5.7E-8 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component RM25_RS04740 13a7987b50d33a41174f31a8fb55c300 187 PANTHER PTHR30055 1 185 5.9E-14 T 22-04-2016 RM25_RS04740 13a7987b50d33a41174f31a8fb55c300 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 45 3.1E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS04740 13a7987b50d33a41174f31a8fb55c300 187 SUPERFAMILY SSF46689 2 63 4.72E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS04740 13a7987b50d33a41174f31a8fb55c300 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 1 14 1.0E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS04740 13a7987b50d33a41174f31a8fb55c300 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 45 1.0E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS04740 13a7987b50d33a41174f31a8fb55c300 187 Gene3D G3DSA:1.10.357.10 2 166 1.1E-23 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 58 77 2.1E-5 T 22-04-2016 RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 463 2.1E-5 T 22-04-2016 RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 Pfam PF02910 Fumarate reductase flavoprotein C-term 538 672 8.1E-38 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 PANTHER PTHR11632 22 673 0.0 T 22-04-2016 RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 SUPERFAMILY SSF56425 283 439 1.5E-29 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 Pfam PF00890 FAD binding domain 58 477 1.4E-53 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 Gene3D G3DSA:3.90.700.10 289 432 8.2E-16 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 PANTHER PTHR11632:SF53 22 673 0.0 T 22-04-2016 RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 Gene3D G3DSA:3.50.50.60 48 288 1.5E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 Gene3D G3DSA:3.50.50.60 434 487 1.5E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 SUPERFAMILY SSF46977 529 672 2.22E-40 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 Gene3D G3DSA:1.20.58.100 510 625 3.2E-33 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 58 672 1.1E-291 T 22-04-2016 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|UniPathway: UPA00223 RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 SUPERFAMILY SSF51905 442 488 1.47E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06660 883fde52bddb95a2059f4a85eaada539 673 SUPERFAMILY SSF51905 56 299 1.47E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 PANTHER PTHR11655:SF14 1 179 6.5E-85 T 22-04-2016 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 PIRSF PIRSF002162 1 179 5.7E-44 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 PANTHER PTHR11655 1 179 6.5E-85 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 156 164 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 PRINTS PR00059 Ribosomal protein L6 signature 143 164 7.1E-30 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 PRINTS PR00059 Ribosomal protein L6 signature 101 117 7.1E-30 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 PRINTS PR00059 Ribosomal protein L6 signature 72 97 7.1E-30 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 Gene3D G3DSA:3.90.930.12 84 179 3.7E-36 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 178 4.5E-71 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 SUPERFAMILY SSF56053 1 83 2.64E-24 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 178 37.746 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 Pfam PF00347 Ribosomal protein L6 11 83 1.1E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 Pfam PF00347 Ribosomal protein L6 91 166 1.3E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 SUPERFAMILY SSF56053 84 178 1.44E-32 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS02685 d9a99ab7baf1e90747577f0bb76226d5 180 Gene3D G3DSA:3.90.930.12 2 83 1.5E-29 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RM25_RS08535 9e165eb076ff269c03d7ba9f121f6437 206 Gene3D G3DSA:3.40.50.850 12 187 5.1E-39 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RM25_RS08535 9e165eb076ff269c03d7ba9f121f6437 206 PANTHER PTHR14119 11 188 6.0E-63 T 22-04-2016 RM25_RS08535 9e165eb076ff269c03d7ba9f121f6437 206 PANTHER PTHR14119:SF1 11 188 6.0E-63 T 22-04-2016 RM25_RS08535 9e165eb076ff269c03d7ba9f121f6437 206 SUPERFAMILY SSF52499 12 187 2.09E-41 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RM25_RS08535 9e165eb076ff269c03d7ba9f121f6437 206 Pfam PF00857 Isochorismatase family 20 174 4.6E-20 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RM25_RS09400 9576143660977d45604612fcbc5549e6 259 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 259 2.9E-108 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 RM25_RS09400 9576143660977d45604612fcbc5549e6 259 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS09400 9576143660977d45604612fcbc5549e6 259 SMART SM00382 29 224 1.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09400 9576143660977d45604612fcbc5549e6 259 Gene3D G3DSA:3.40.50.300 3 250 1.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09400 9576143660977d45604612fcbc5549e6 259 Pfam PF00005 ABC transporter 21 177 5.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS09400 9576143660977d45604612fcbc5549e6 259 PANTHER PTHR24220:SF585 6 257 1.3E-111 T 22-04-2016 RM25_RS09400 9576143660977d45604612fcbc5549e6 259 PANTHER PTHR24220 6 257 1.3E-111 T 22-04-2016 RM25_RS09400 9576143660977d45604612fcbc5549e6 259 SUPERFAMILY SSF52540 5 246 3.19E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07695 b8ffa9c2ff8069726199e667e77e27da 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 298 4.6E-71 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS07695 b8ffa9c2ff8069726199e667e77e27da 322 Gene3D G3DSA:3.40.50.1100 42 138 3.5E-36 T 22-04-2016 RM25_RS07695 b8ffa9c2ff8069726199e667e77e27da 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 37 55 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RM25_RS07695 b8ffa9c2ff8069726199e667e77e27da 322 SUPERFAMILY SSF53686 4 308 2.62E-102 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS07695 b8ffa9c2ff8069726199e667e77e27da 322 PANTHER PTHR10314 4 308 5.8E-146 T 22-04-2016 RM25_RS07695 b8ffa9c2ff8069726199e667e77e27da 322 Gene3D G3DSA:3.40.50.1100 139 308 6.1E-76 T 22-04-2016 RM25_RS07695 b8ffa9c2ff8069726199e667e77e27da 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 308 4.9E-123 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RM25_RS07695 b8ffa9c2ff8069726199e667e77e27da 322 PANTHER PTHR10314:SF110 4 308 5.8E-146 T 22-04-2016 RM25_RS07695 b8ffa9c2ff8069726199e667e77e27da 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 308 1.6E-119 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 PRINTS PR00151 Porphobilinogen deaminase signature 236 253 1.1E-19 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 PRINTS PR00151 Porphobilinogen deaminase signature 131 148 1.1E-19 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 PRINTS PR00151 Porphobilinogen deaminase signature 83 102 1.1E-19 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 PRINTS PR00151 Porphobilinogen deaminase signature 150 167 1.1E-19 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 Gene3D G3DSA:3.40.190.10 13 117 2.2E-27 T 22-04-2016 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 14 309 31.864 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 Gene3D G3DSA:3.40.190.10 118 206 2.9E-35 T 22-04-2016 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 15 309 8.5E-87 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 SUPERFAMILY SSF54782 226 309 9.81E-12 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 15 217 5.0E-61 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 PIRSF PIRSF001438 2 310 2.6E-94 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 Gene3D G3DSA:3.30.160.40 227 308 1.2E-11 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 SUPERFAMILY SSF53850 14 219 2.07E-63 T 22-04-2016 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 233 307 2.1E-7 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 PANTHER PTHR11557 11 309 3.7E-88 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08895 ab8fc7f621141a5522f6bcef669262c0 310 PANTHER PTHR11557:SF0 11 309 3.7E-88 T 22-04-2016 RM25_RS03340 41e189c9902210415a37ea16c3222bb1 524 Pfam PF01039 Carboxyl transferase domain 32 522 6.8E-186 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RM25_RS03340 41e189c9902210415a37ea16c3222bb1 524 Gene3D G3DSA:3.90.226.10 276 524 2.3E-99 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS03340 41e189c9902210415a37ea16c3222bb1 524 SUPERFAMILY SSF52096 247 524 1.09E-88 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS03340 41e189c9902210415a37ea16c3222bb1 524 SUPERFAMILY SSF52096 9 260 3.48E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS03340 41e189c9902210415a37ea16c3222bb1 524 PANTHER PTHR22855 3 524 5.7E-303 T 22-04-2016 RM25_RS03340 41e189c9902210415a37ea16c3222bb1 524 Gene3D G3DSA:3.90.226.10 3 261 6.4E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS03340 41e189c9902210415a37ea16c3222bb1 524 PANTHER PTHR22855:SF14 3 524 5.7E-303 T 22-04-2016 RM25_RS03340 41e189c9902210415a37ea16c3222bb1 524 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 99 113 6.1E-5 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RM25_RS03340 41e189c9902210415a37ea16c3222bb1 524 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 133 151 6.1E-5 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RM25_RS05970 4fa86d4e50ae8b497e0acbd274ce0925 160 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site RM25_RS05970 4fa86d4e50ae8b497e0acbd274ce0925 160 PANTHER PTHR30308 1 157 2.0E-69 T 22-04-2016 RM25_RS05970 4fa86d4e50ae8b497e0acbd274ce0925 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 65.358 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RM25_RS05970 4fa86d4e50ae8b497e0acbd274ce0925 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 10 134 8.0E-43 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RM25_RS05970 4fa86d4e50ae8b497e0acbd274ce0925 160 PANTHER PTHR30308:SF2 1 157 2.0E-69 T 22-04-2016 RM25_RS05970 4fa86d4e50ae8b497e0acbd274ce0925 160 Pfam PF01668 SmpB protein 9 71 4.2E-28 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RM25_RS05970 4fa86d4e50ae8b497e0acbd274ce0925 160 Gene3D G3DSA:2.40.280.10 8 129 5.7E-46 T 22-04-2016 IPR023620 Small protein B RM25_RS05970 4fa86d4e50ae8b497e0acbd274ce0925 160 SUPERFAMILY SSF74982 4 134 3.4E-46 T 22-04-2016 IPR023620 Small protein B RM25_RS05970 4fa86d4e50ae8b497e0acbd274ce0925 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 1.8E-52 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RM25_RS06015 d55bd37f76daed5f0a7f85a92f05c695 445 Gene3D G3DSA:3.40.640.10 79 324 5.3E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS06015 d55bd37f76daed5f0a7f85a92f05c695 445 PANTHER PTHR11986:SF17 8 445 1.0E-164 T 22-04-2016 RM25_RS06015 d55bd37f76daed5f0a7f85a92f05c695 445 Gene3D G3DSA:3.90.1150.10 325 445 3.2E-30 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS06015 d55bd37f76daed5f0a7f85a92f05c695 445 SUPERFAMILY SSF53383 38 443 3.19E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS06015 d55bd37f76daed5f0a7f85a92f05c695 445 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 29 443 6.2E-158 T 22-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 RM25_RS06015 d55bd37f76daed5f0a7f85a92f05c695 445 PANTHER PTHR11986 8 445 1.0E-164 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS06015 d55bd37f76daed5f0a7f85a92f05c695 445 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 258 295 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS06015 d55bd37f76daed5f0a7f85a92f05c695 445 Pfam PF00202 Aminotransferase class-III 42 443 4.3E-112 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS04625 7d6214256e24352bf4e0c8a84510eb72 280 Pfam PF01903 CbiX 12 114 4.2E-10 T 22-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 RM25_RS04625 7d6214256e24352bf4e0c8a84510eb72 280 SUPERFAMILY SSF53800 6 237 1.09E-15 T 22-04-2016 RM25_RS04625 7d6214256e24352bf4e0c8a84510eb72 280 Gene3D G3DSA:3.40.50.1400 5 124 2.0E-12 T 22-04-2016 RM25_RS01480 d05b27467eb44de1f38474b777bfbf4e 523 Pfam PF07523 Bacterial Ig-like domain (group 3) 179 248 5.7E-8 T 22-04-2016 IPR022038 Bacterial Ig-like domain RM25_RS01480 d05b27467eb44de1f38474b777bfbf4e 523 Pfam PF00395 S-layer homology domain 343 384 2.0E-8 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS01480 d05b27467eb44de1f38474b777bfbf4e 523 Pfam PF00395 S-layer homology domain 465 508 9.9E-7 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS01480 d05b27467eb44de1f38474b777bfbf4e 523 Pfam PF00395 S-layer homology domain 403 446 6.0E-11 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS09745 0bb9318fdea1ad6851471e91ea9c318a 383 Gene3D G3DSA:3.30.450.90 54 149 7.6E-25 T 22-04-2016 RM25_RS09745 0bb9318fdea1ad6851471e91ea9c318a 383 PANTHER PTHR30258 25 344 4.1E-111 T 22-04-2016 RM25_RS09745 0bb9318fdea1ad6851471e91ea9c318a 383 Pfam PF00437 Type II/IV secretion system protein 56 330 5.4E-72 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RM25_RS09745 0bb9318fdea1ad6851471e91ea9c318a 383 Gene3D G3DSA:3.40.50.300 155 352 5.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09745 0bb9318fdea1ad6851471e91ea9c318a 383 SUPERFAMILY SSF52540 42 350 2.41E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09745 0bb9318fdea1ad6851471e91ea9c318a 383 TIGRFAM TIGR03819 heli_sec_ATPase: helicase/secretion neighborhood ATPase 7 343 6.8E-147 T 22-04-2016 IPR022399 Helicase/secretion neighbourhood ATPase RM25_RS09745 0bb9318fdea1ad6851471e91ea9c318a 383 PANTHER PTHR30258:SF12 25 344 4.1E-111 T 22-04-2016 RM25_RS07930 e95b1db3b1f7fe1c1f2eabcd631ad15f 80 PANTHER PTHR34137 1 80 1.5E-18 T 22-04-2016 RM25_RS07930 e95b1db3b1f7fe1c1f2eabcd631ad15f 80 SUPERFAMILY SSF116842 4 66 3.66E-17 T 22-04-2016 RM25_RS07930 e95b1db3b1f7fe1c1f2eabcd631ad15f 80 Gene3D G3DSA:1.10.287.1040 7 69 1.1E-22 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RM25_RS07930 e95b1db3b1f7fe1c1f2eabcd631ad15f 80 PIRSF PIRSF006488 1 80 2.1E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RM25_RS07930 e95b1db3b1f7fe1c1f2eabcd631ad15f 80 Pfam PF02609 Exonuclease VII small subunit 11 62 1.5E-17 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RM25_RS07930 e95b1db3b1f7fe1c1f2eabcd631ad15f 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 8 50 3.0E-11 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RM25_RS07930 e95b1db3b1f7fe1c1f2eabcd631ad15f 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 12.771 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RM25_RS07930 e95b1db3b1f7fe1c1f2eabcd631ad15f 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 6.8E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RM25_RS09020 4cf3795ac5f7ad0bbd43ed727cc06aa0 191 Gene3D G3DSA:2.40.260.10 50 190 2.3E-17 T 22-04-2016 IPR023365 Sortase domain RM25_RS09020 4cf3795ac5f7ad0bbd43ed727cc06aa0 191 SUPERFAMILY SSF63817 51 188 6.41E-19 T 22-04-2016 IPR023365 Sortase domain RM25_RS09020 4cf3795ac5f7ad0bbd43ed727cc06aa0 191 Pfam PF04203 Sortase family 58 189 6.0E-17 T 22-04-2016 IPR005754 Sortase family RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 SUPERFAMILY SSF63418 10 91 9.29E-18 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 Gene3D G3DSA:3.40.1390.10 4 91 1.3E-18 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 479 30.642 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 Gene3D G3DSA:3.90.190.20 332 472 9.6E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 PANTHER PTHR23135 1 493 2.7E-153 T 22-04-2016 RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 13 478 3.1E-137 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 Pfam PF01225 Mur ligase family, catalytic domain 17 88 2.1E-9 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 SUPERFAMILY SSF53623 93 324 3.27E-67 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 408 2.2E-17 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 Pfam PF08245 Mur ligase middle domain 102 308 1.4E-49 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 SUPERFAMILY SSF53244 328 479 2.14E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 Gene3D G3DSA:3.40.1190.10 93 331 8.7E-71 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07275 9fd75abf1b569ad153da889e8c78aeb3 499 PANTHER PTHR23135:SF4 1 493 2.7E-153 T 22-04-2016 RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 SUPERFAMILY SSF52540 13 422 8.33E-132 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 SMART SM00490 467 553 2.4E-16 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 Gene3D G3DSA:3.40.50.300 426 588 1.5E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 Pfam PF04851 Type III restriction enzyme, res subunit 21 147 2.1E-8 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 Hamap MF_00204 UvrABC system protein B [uvrB]. 12 685 42.484 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 SUPERFAMILY SSF52540 464 591 2.0E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 SUPERFAMILY SSF52540 41 76 2.0E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 PANTHER PTHR24029 8 693 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 Gene3D G3DSA:4.10.860.10 641 688 4.3E-14 T 22-04-2016 IPR001943 UVR domain GO:0005515 RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 Gene3D G3DSA:3.40.50.300 286 346 2.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 Gene3D G3DSA:3.40.50.300 15 98 2.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 Gene3D G3DSA:3.40.50.300 396 417 2.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 SMART SM00487 18 433 2.3E-25 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 Pfam PF00271 Helicase conserved C-terminal domain 442 552 1.3E-17 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 SUPERFAMILY SSF46600 644 687 1.7E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 Gene3D G3DSA:3.30.2060.10 168 238 1.2E-12 T 22-04-2016 RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 14 683 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 Pfam PF12344 Ultra-violet resistance protein B 559 600 9.7E-21 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain RM25_RS07150 ac9bd67d8bd7027552eaaa2b8c3baaad 694 Pfam PF02151 UvrB/uvrC motif 652 685 2.3E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 RM25_RS09620 cbb412127e0daf9648252bab7a7d70f7 483 PIRSF PIRSF006060 2 482 1.3E-75 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS09620 cbb412127e0daf9648252bab7a7d70f7 483 Pfam PF00324 Amino acid permease 31 440 7.5E-100 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RM25_RS09620 cbb412127e0daf9648252bab7a7d70f7 483 PANTHER PTHR11785 15 462 6.5E-186 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS09620 cbb412127e0daf9648252bab7a7d70f7 483 PANTHER PTHR11785:SF336 15 462 6.5E-186 T 22-04-2016 RM25_RS09620 cbb412127e0daf9648252bab7a7d70f7 483 ProSitePatterns PS00218 Amino acid permeases signature. 56 86 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RM25_RS06860 2a7763617c864a1d92b034c45aca9622 383 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 22 364 4.0E-125 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RM25_RS06860 2a7763617c864a1d92b034c45aca9622 383 PIRSF PIRSF004640 16 376 7.9E-144 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RM25_RS06860 2a7763617c864a1d92b034c45aca9622 383 SUPERFAMILY SSF51717 29 223 7.85E-12 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RM25_RS06860 2a7763617c864a1d92b034c45aca9622 383 PANTHER PTHR30454 22 371 7.4E-176 T 22-04-2016 RM25_RS06860 2a7763617c864a1d92b034c45aca9622 383 Gene3D G3DSA:3.20.20.70 37 123 1.1E-5 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS06860 2a7763617c864a1d92b034c45aca9622 383 Pfam PF04551 GcpE protein 25 366 3.1E-131 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RM25_RS06860 2a7763617c864a1d92b034c45aca9622 383 SUPERFAMILY SSF56014 280 363 7.85E-12 T 22-04-2016 RM25_RS06860 2a7763617c864a1d92b034c45aca9622 383 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 20 371 33.422 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RM25_RS03025 58e9f97cb9ec822d0269d3221af0aab2 279 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 50 192 7.3E-8 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RM25_RS03025 58e9f97cb9ec822d0269d3221af0aab2 279 SUPERFAMILY SSF53187 49 193 2.29E-7 T 22-04-2016 RM25_RS03025 58e9f97cb9ec822d0269d3221af0aab2 279 Gene3D G3DSA:3.40.630.40 48 160 5.7E-9 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RM25_RS07405 b68d655b133506efaa956690b294b89f 349 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 13 341 7.3E-103 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 RM25_RS07405 b68d655b133506efaa956690b294b89f 349 Pfam PF00591 Glycosyl transferase family, a/b domain 77 304 9.8E-76 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RM25_RS07405 b68d655b133506efaa956690b294b89f 349 Gene3D G3DSA:3.40.1030.10 75 344 2.3E-94 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RM25_RS07405 b68d655b133506efaa956690b294b89f 349 Pfam PF02885 Glycosyl transferase family, helical bundle domain 12 69 3.1E-15 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RM25_RS07405 b68d655b133506efaa956690b294b89f 349 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 8 342 34.201 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 RM25_RS07405 b68d655b133506efaa956690b294b89f 349 SUPERFAMILY SSF47648 6 71 9.29E-18 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RM25_RS07405 b68d655b133506efaa956690b294b89f 349 PANTHER PTHR11922:SF5 1 346 2.2E-89 T 22-04-2016 RM25_RS07405 b68d655b133506efaa956690b294b89f 349 SUPERFAMILY SSF52418 76 346 1.1E-74 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RM25_RS07405 b68d655b133506efaa956690b294b89f 349 Gene3D G3DSA:1.20.970.10 8 72 4.8E-23 T 22-04-2016 RM25_RS07405 b68d655b133506efaa956690b294b89f 349 PANTHER PTHR11922 1 346 2.2E-89 T 22-04-2016 RM25_RS03240 cfc80b5ceadac0620613f73404aa9ba4 214 PANTHER PTHR34582 1 214 1.0E-40 T 22-04-2016 RM25_RS03240 cfc80b5ceadac0620613f73404aa9ba4 214 Gene3D G3DSA:3.30.240.20 160 211 5.4E-10 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain RM25_RS03240 cfc80b5ceadac0620613f73404aa9ba4 214 Pfam PF04239 Protein of unknown function (DUF421) 93 192 1.4E-25 T 22-04-2016 IPR007353 Protein of unknown function DUF421 RM25_RS03240 cfc80b5ceadac0620613f73404aa9ba4 214 PANTHER PTHR34582:SF6 1 214 1.0E-40 T 22-04-2016 RM25_RS03240 cfc80b5ceadac0620613f73404aa9ba4 214 Gene3D G3DSA:3.30.240.20 85 155 3.0E-17 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain RM25_RS04335 a474270c236e9fd1ee044ade5da73e24 204 Gene3D G3DSA:1.10.10.10 53 98 1.8E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04335 a474270c236e9fd1ee044ade5da73e24 204 PANTHER PTHR33602:SF1 47 204 6.9E-20 T 22-04-2016 RM25_RS04335 a474270c236e9fd1ee044ade5da73e24 204 Gene3D G3DSA:1.10.10.10 101 144 8.5E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04335 a474270c236e9fd1ee044ade5da73e24 204 Pfam PF02631 RecX family 79 195 1.0E-23 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 RM25_RS04335 a474270c236e9fd1ee044ade5da73e24 204 Hamap MF_01114 Regulatory protein RecX [recX]. 46 202 13.577 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 RM25_RS04335 a474270c236e9fd1ee044ade5da73e24 204 PANTHER PTHR33602 47 204 6.9E-20 T 22-04-2016 RM25_RS05305 791502f3893b6654154a6dd811323f87 335 SUPERFAMILY SSF53850 43 269 5.29E-33 T 22-04-2016 RM25_RS05305 791502f3893b6654154a6dd811323f87 335 Gene3D G3DSA:3.40.190.10 82 138 1.5E-4 T 22-04-2016 RM25_RS05305 791502f3893b6654154a6dd811323f87 335 Pfam PF09084 NMT1/THI5 like 54 259 1.2E-39 T 22-04-2016 IPR015168 SsuA/THI5-like RM25_RS05305 791502f3893b6654154a6dd811323f87 335 Gene3D G3DSA:3.40.190.10 139 249 2.8E-14 T 22-04-2016 RM25_RS05305 791502f3893b6654154a6dd811323f87 335 PANTHER PTHR31528:SF4 44 330 4.0E-56 T 22-04-2016 RM25_RS05305 791502f3893b6654154a6dd811323f87 335 PANTHER PTHR31528 44 330 4.0E-56 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 RM25_RS12060 13c7054309f680d5f3b0f98fdbc88a0b 104 SUPERFAMILY SSF51556 1 82 9.72E-14 T 22-04-2016 IPR032466 Metal-dependent hydrolase RM25_RS12060 13c7054309f680d5f3b0f98fdbc88a0b 104 Pfam PF04909 Amidohydrolase 2 82 2.6E-9 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RM25_RS12060 13c7054309f680d5f3b0f98fdbc88a0b 104 PANTHER PTHR21240 1 92 1.8E-20 T 22-04-2016 RM25_RS12060 13c7054309f680d5f3b0f98fdbc88a0b 104 PANTHER PTHR21240:SF9 1 92 1.8E-20 T 22-04-2016 RM25_RS12060 13c7054309f680d5f3b0f98fdbc88a0b 104 Gene3D G3DSA:3.20.20.140 1 85 9.7E-15 T 22-04-2016 RM25_RS08445 241a25e58763e2d0ff92f61ea0f322b4 592 Gene3D G3DSA:3.40.50.300 373 566 4.5E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08445 241a25e58763e2d0ff92f61ea0f322b4 592 Gene3D G3DSA:3.40.50.300 151 235 4.5E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08445 241a25e58763e2d0ff92f61ea0f322b4 592 SUPERFAMILY SSF52540 144 569 2.12E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08445 241a25e58763e2d0ff92f61ea0f322b4 592 Pfam PF12696 TraM recognition site of TraD and TraG 427 545 3.9E-26 T 22-04-2016 IPR032689 TraD/TraG, TraM recognition site RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 PANTHER PTHR18937:SF261 2 1176 2.5E-265 T 22-04-2016 RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1179 1.2E-272 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 PIRSF PIRSF005719 1 1181 7.6E-253 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 PANTHER PTHR18937 2 1176 2.5E-265 T 22-04-2016 RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 SUPERFAMILY SSF52540 2 207 4.74E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 SUPERFAMILY SSF52540 980 1171 4.74E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1172 3.9E-69 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 Gene3D G3DSA:3.40.50.300 1028 1175 9.6E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 Gene3D G3DSA:3.40.50.300 2 163 9.6E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1181 22.607 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 SUPERFAMILY SSF75553 479 665 1.02E-24 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 Gene3D G3DSA:3.40.50.300 283 357 5.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 SMART SM00968 509 621 1.0E-21 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RM25_RS06720 895ff157d464fdbfb3b3cdc5a7dde47e 1181 Pfam PF06470 SMC proteins Flexible Hinge Domain 509 618 6.7E-21 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RM25_RS00600 07ba603952a07ab7aef1d20014f70591 517 Gene3D G3DSA:3.40.50.10300 296 512 1.7E-83 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RM25_RS00600 07ba603952a07ab7aef1d20014f70591 517 Gene3D G3DSA:3.40.50.1950 7 198 6.8E-60 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RM25_RS00600 07ba603952a07ab7aef1d20014f70591 517 Pfam PF02441 Flavoprotein 13 150 5.3E-31 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RM25_RS00600 07ba603952a07ab7aef1d20014f70591 517 PANTHER PTHR14359 291 514 1.5E-152 T 22-04-2016 RM25_RS00600 07ba603952a07ab7aef1d20014f70591 517 PANTHER PTHR14359 213 261 1.5E-152 T 22-04-2016 RM25_RS00600 07ba603952a07ab7aef1d20014f70591 517 PANTHER PTHR14359 10 197 1.5E-152 T 22-04-2016 RM25_RS00600 07ba603952a07ab7aef1d20014f70591 517 PANTHER PTHR14359:SF20 291 514 1.5E-152 T 22-04-2016 RM25_RS00600 07ba603952a07ab7aef1d20014f70591 517 PANTHER PTHR14359:SF20 213 261 1.5E-152 T 22-04-2016 RM25_RS00600 07ba603952a07ab7aef1d20014f70591 517 PANTHER PTHR14359:SF20 10 197 1.5E-152 T 22-04-2016 RM25_RS00600 07ba603952a07ab7aef1d20014f70591 517 SUPERFAMILY SSF52507 10 196 3.01E-52 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RM25_RS00600 07ba603952a07ab7aef1d20014f70591 517 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 298 482 3.1E-73 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RM25_RS00600 07ba603952a07ab7aef1d20014f70591 517 SUPERFAMILY SSF102645 296 512 7.98E-74 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 PANTHER PTHR11732 1 286 2.3E-120 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 125 142 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 Pfam PF00248 Aldo/keto reductase family 23 268 1.0E-45 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 Gene3D G3DSA:3.20.20.100 4 284 5.7E-95 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 237 252 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 SUPERFAMILY SSF51430 5 276 3.93E-85 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 PRINTS PR00069 Aldo-keto reductase signature 125 142 5.4E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 PRINTS PR00069 Aldo-keto reductase signature 92 110 5.4E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 PRINTS PR00069 Aldo-keto reductase signature 204 228 5.4E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 PRINTS PR00069 Aldo-keto reductase signature 159 188 5.4E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 PRINTS PR00069 Aldo-keto reductase signature 36 60 5.4E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 40 57 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RM25_RS08435 279f46a57ab67432b3a9c8140beed59c 293 PIRSF PIRSF000097 1 289 1.7E-77 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS03380 7f9edb850cf9c43a1924b5dc4dc7ca6c 263 Pfam PF03099 Biotin/lipoate A/B protein ligase family 42 147 1.4E-11 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RM25_RS03380 7f9edb850cf9c43a1924b5dc4dc7ca6c 263 PANTHER PTHR12835 25 263 2.7E-47 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RM25_RS03380 7f9edb850cf9c43a1924b5dc4dc7ca6c 263 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 26 261 2.5E-37 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RM25_RS03380 7f9edb850cf9c43a1924b5dc4dc7ca6c 263 SUPERFAMILY SSF55681 13 204 3.98E-42 T 22-04-2016 RM25_RS03380 7f9edb850cf9c43a1924b5dc4dc7ca6c 263 Gene3D G3DSA:2.30.30.100 211 259 1.1E-6 T 22-04-2016 RM25_RS03380 7f9edb850cf9c43a1924b5dc4dc7ca6c 263 Gene3D G3DSA:3.30.930.10 14 208 3.6E-47 T 22-04-2016 RM25_RS03380 7f9edb850cf9c43a1924b5dc4dc7ca6c 263 SUPERFAMILY SSF50037 226 261 3.48E-6 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal RM25_RS03380 7f9edb850cf9c43a1924b5dc4dc7ca6c 263 Pfam PF02237 Biotin protein ligase C terminal domain 210 261 5.1E-7 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 RM25_RS06800 fcd38695cfd522dc459e903aa8f1b888 325 Pfam PF01687 Riboflavin kinase 174 301 1.6E-30 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RM25_RS06800 fcd38695cfd522dc459e903aa8f1b888 325 SUPERFAMILY SSF52374 1 165 1.9E-25 T 22-04-2016 RM25_RS06800 fcd38695cfd522dc459e903aa8f1b888 325 PANTHER PTHR22749 5 302 6.9E-92 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 RM25_RS06800 fcd38695cfd522dc459e903aa8f1b888 325 Pfam PF06574 FAD synthetase 3 156 8.0E-39 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RM25_RS06800 fcd38695cfd522dc459e903aa8f1b888 325 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 6 301 3.4E-61 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RM25_RS06800 fcd38695cfd522dc459e903aa8f1b888 325 SMART SM00904 173 302 8.0E-49 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RM25_RS06800 fcd38695cfd522dc459e903aa8f1b888 325 PIRSF PIRSF004491 1 307 1.5E-86 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RM25_RS06800 fcd38695cfd522dc459e903aa8f1b888 325 Gene3D G3DSA:2.40.30.30 170 304 1.1E-40 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 RM25_RS06800 fcd38695cfd522dc459e903aa8f1b888 325 SUPERFAMILY SSF82114 164 303 1.68E-38 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RM25_RS06800 fcd38695cfd522dc459e903aa8f1b888 325 PANTHER PTHR22749:SF0 5 302 6.9E-92 T 22-04-2016 RM25_RS06800 fcd38695cfd522dc459e903aa8f1b888 325 Gene3D G3DSA:3.40.50.620 3 169 1.5E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS07515 896c3db3e19a196fd21f7a2bcc913d51 302 Hamap MF_01974 Methionine aminopeptidase [map]. 36 282 39.248 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RM25_RS07515 896c3db3e19a196fd21f7a2bcc913d51 302 PANTHER PTHR10804 12 280 2.5E-131 T 22-04-2016 RM25_RS07515 896c3db3e19a196fd21f7a2bcc913d51 302 SUPERFAMILY SSF55920 19 282 1.96E-81 T 22-04-2016 IPR000994 Peptidase M24, structural domain RM25_RS07515 896c3db3e19a196fd21f7a2bcc913d51 302 Pfam PF00557 Metallopeptidase family M24 45 272 4.0E-49 T 22-04-2016 IPR000994 Peptidase M24, structural domain RM25_RS07515 896c3db3e19a196fd21f7a2bcc913d51 302 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 38 280 2.0E-87 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RM25_RS07515 896c3db3e19a196fd21f7a2bcc913d51 302 Gene3D G3DSA:3.90.230.10 39 283 8.8E-90 T 22-04-2016 IPR000994 Peptidase M24, structural domain RM25_RS07515 896c3db3e19a196fd21f7a2bcc913d51 302 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 199 217 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RM25_RS07515 896c3db3e19a196fd21f7a2bcc913d51 302 PANTHER PTHR10804:SF82 12 280 2.5E-131 T 22-04-2016 RM25_RS07515 896c3db3e19a196fd21f7a2bcc913d51 302 PRINTS PR00599 Methionine aminopeptidase-1 signature 123 139 7.4E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RM25_RS07515 896c3db3e19a196fd21f7a2bcc913d51 302 PRINTS PR00599 Methionine aminopeptidase-1 signature 224 236 7.4E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RM25_RS07515 896c3db3e19a196fd21f7a2bcc913d51 302 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 7.4E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RM25_RS07515 896c3db3e19a196fd21f7a2bcc913d51 302 PRINTS PR00599 Methionine aminopeptidase-1 signature 101 114 7.4E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RM25_RS05440 a54cbc16283df5ae4b3f06d2d5300344 328 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 95 327 3.4E-8 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 RM25_RS05440 a54cbc16283df5ae4b3f06d2d5300344 328 SUPERFAMILY SSF51726 76 326 1.57E-17 T 22-04-2016 RM25_RS05440 a54cbc16283df5ae4b3f06d2d5300344 328 Gene3D G3DSA:3.20.20.210 99 327 3.9E-11 T 22-04-2016 RM25_RS06245 431078e44a4bccbe87c91f862767c654 205 Pfam PF00936 BMC domain 6 82 8.2E-24 T 22-04-2016 IPR000249 Microcompartment protein, bacteria RM25_RS06245 431078e44a4bccbe87c91f862767c654 205 SUPERFAMILY SSF143414 5 92 7.06E-24 T 22-04-2016 RM25_RS06245 431078e44a4bccbe87c91f862767c654 205 PANTHER PTHR33941 5 174 2.0E-24 T 22-04-2016 RM25_RS06245 431078e44a4bccbe87c91f862767c654 205 SMART SM00877 5 82 1.5E-24 T 22-04-2016 IPR000249 Microcompartment protein, bacteria RM25_RS06245 431078e44a4bccbe87c91f862767c654 205 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 51 1.0E-5 T 22-04-2016 RM25_RS09555 05a6c8519846670be87c79b360f82f30 809 Gene3D G3DSA:3.40.50.10190 725 801 1.5E-7 T 22-04-2016 IPR001357 BRCT domain RM25_RS09555 05a6c8519846670be87c79b360f82f30 809 SUPERFAMILY SSF52540 12 196 3.09E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09555 05a6c8519846670be87c79b360f82f30 809 SUPERFAMILY SSF52540 139 444 8.32E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09555 05a6c8519846670be87c79b360f82f30 809 Pfam PF05970 PIF1-like helicase 26 215 6.0E-24 T 22-04-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 RM25_RS09555 05a6c8519846670be87c79b360f82f30 809 SMART SM00382 27 159 0.0037 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09555 05a6c8519846670be87c79b360f82f30 809 PANTHER PTHR23274 12 532 2.1E-99 T 22-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 RM25_RS09555 05a6c8519846670be87c79b360f82f30 809 Gene3D G3DSA:3.40.50.300 150 263 1.3E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09555 05a6c8519846670be87c79b360f82f30 809 Gene3D G3DSA:3.40.50.300 367 429 1.3E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09555 05a6c8519846670be87c79b360f82f30 809 Gene3D G3DSA:3.40.50.300 27 149 2.8E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01620 015e0693f435266ecab686ebd037852c 894 SUPERFAMILY SSF52540 371 497 5.11E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01620 015e0693f435266ecab686ebd037852c 894 SUPERFAMILY SSF52540 204 343 5.11E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01620 015e0693f435266ecab686ebd037852c 894 SUPERFAMILY SSF56024 2 112 1.1E-6 T 22-04-2016 RM25_RS01620 015e0693f435266ecab686ebd037852c 894 Gene3D G3DSA:3.40.50.300 365 491 1.1E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01620 015e0693f435266ecab686ebd037852c 894 Pfam PF11907 Domain of unknown function (DUF3427) 701 886 6.5E-23 T 22-04-2016 IPR021835 Protein of unknown function DUF3427 RM25_RS01620 015e0693f435266ecab686ebd037852c 894 Pfam PF13091 PLD-like domain 2 110 1.0E-9 T 22-04-2016 IPR025202 Phospholipase D-like domain RM25_RS01620 015e0693f435266ecab686ebd037852c 894 Gene3D G3DSA:3.40.50.300 146 307 8.5E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01620 015e0693f435266ecab686ebd037852c 894 PANTHER PTHR24031:SF210 324 481 2.1E-31 T 22-04-2016 RM25_RS01620 015e0693f435266ecab686ebd037852c 894 PANTHER PTHR24031:SF210 174 301 2.1E-31 T 22-04-2016 RM25_RS01620 015e0693f435266ecab686ebd037852c 894 Pfam PF00271 Helicase conserved C-terminal domain 387 481 1.1E-12 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS01620 015e0693f435266ecab686ebd037852c 894 Gene3D G3DSA:3.30.870.10 2 112 1.9E-7 T 22-04-2016 RM25_RS01620 015e0693f435266ecab686ebd037852c 894 Pfam PF04851 Type III restriction enzyme, res subunit 149 303 9.6E-29 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RM25_RS01620 015e0693f435266ecab686ebd037852c 894 SMART SM00490 402 483 6.1E-15 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS01620 015e0693f435266ecab686ebd037852c 894 SMART SM00487 147 341 1.1E-9 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS01620 015e0693f435266ecab686ebd037852c 894 PANTHER PTHR24031 324 481 2.1E-31 T 22-04-2016 RM25_RS01620 015e0693f435266ecab686ebd037852c 894 PANTHER PTHR24031 174 301 2.1E-31 T 22-04-2016 RM25_RS08735 8d9307d023e00f338d79524cb171a492 512 PANTHER PTHR32479:SF10 18 508 1.1E-167 T 22-04-2016 RM25_RS08735 8d9307d023e00f338d79524cb171a492 512 PANTHER PTHR32479 18 508 1.1E-167 T 22-04-2016 RM25_RS08735 8d9307d023e00f338d79524cb171a492 512 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 94 321 5.0E-47 T 22-04-2016 IPR003741 LUD domain RM25_RS08735 8d9307d023e00f338d79524cb171a492 512 Gene3D G3DSA:1.10.1060.10 336 425 1.0E-13 T 22-04-2016 RM25_RS08735 8d9307d023e00f338d79524cb171a492 512 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 393 404 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS08735 8d9307d023e00f338d79524cb171a492 512 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 341 352 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS08735 8d9307d023e00f338d79524cb171a492 512 SUPERFAMILY SSF54862 317 423 5.02E-17 T 22-04-2016 RM25_RS08735 8d9307d023e00f338d79524cb171a492 512 Gene3D G3DSA:3.40.50.10420 220 323 4.1E-39 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RM25_RS08735 8d9307d023e00f338d79524cb171a492 512 Gene3D G3DSA:3.40.50.10420 89 152 4.1E-39 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RM25_RS08735 8d9307d023e00f338d79524cb171a492 512 Pfam PF13183 4Fe-4S dicluster domain 338 407 1.3E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RM25_RS08735 8d9307d023e00f338d79524cb171a492 512 SUPERFAMILY SSF100950 159 323 1.84E-33 T 22-04-2016 RM25_RS08735 8d9307d023e00f338d79524cb171a492 512 SUPERFAMILY SSF100950 89 113 1.84E-33 T 22-04-2016 RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 Pfam PF00005 ABC transporter 467 672 2.5E-11 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 SUPERFAMILY SSF52540 463 725 1.52E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 Gene3D G3DSA:1.20.1580.10 518 634 2.1E-40 T 22-04-2016 RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 Gene3D G3DSA:1.20.1580.10 97 154 8.8E-33 T 22-04-2016 RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 Gene3D G3DSA:1.20.1580.10 260 327 8.8E-33 T 22-04-2016 RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 PANTHER PTHR32282 6 750 1.0E-297 T 22-04-2016 RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 PANTHER PTHR32282:SF10 6 750 1.0E-297 T 22-04-2016 RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 Gene3D G3DSA:1.10.8.280 155 259 2.2E-7 T 22-04-2016 RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 Gene3D G3DSA:3.40.50.300 635 750 4.3E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 Gene3D G3DSA:3.40.50.300 13 46 2.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 Gene3D G3DSA:3.40.50.300 450 517 4.3E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 Gene3D G3DSA:3.40.50.300 81 82 2.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 Gene3D G3DSA:3.40.50.300 328 443 2.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 SUPERFAMILY SSF52540 187 420 3.05E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 SUPERFAMILY SSF52540 16 57 3.05E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10450 e8bcb08d89233070ecafcbfe77c3a39f 760 ProSitePatterns PS00211 ABC transporters family signature. 644 658 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS09195 aa2cca81dfb90e689ff3c69f8cdc6746 142 Gene3D G3DSA:3.40.30.10 4 102 8.0E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS09195 aa2cca81dfb90e689ff3c69f8cdc6746 142 PANTHER PTHR10438:SF266 7 128 4.6E-39 T 22-04-2016 RM25_RS09195 aa2cca81dfb90e689ff3c69f8cdc6746 142 PRINTS PR00421 Thioredoxin family signature 21 29 4.7E-6 T 22-04-2016 RM25_RS09195 aa2cca81dfb90e689ff3c69f8cdc6746 142 PRINTS PR00421 Thioredoxin family signature 68 79 4.7E-6 T 22-04-2016 RM25_RS09195 aa2cca81dfb90e689ff3c69f8cdc6746 142 PRINTS PR00421 Thioredoxin family signature 29 38 4.7E-6 T 22-04-2016 RM25_RS09195 aa2cca81dfb90e689ff3c69f8cdc6746 142 PANTHER PTHR10438 7 128 4.6E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RM25_RS09195 aa2cca81dfb90e689ff3c69f8cdc6746 142 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RM25_RS09195 aa2cca81dfb90e689ff3c69f8cdc6746 142 Pfam PF00085 Thioredoxin 4 101 6.6E-24 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RM25_RS09195 aa2cca81dfb90e689ff3c69f8cdc6746 142 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 1.3E-28 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RM25_RS09195 aa2cca81dfb90e689ff3c69f8cdc6746 142 SUPERFAMILY SSF52833 5 103 2.32E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS01590 ff0f395cbd4148550aa71670f2b89f29 191 SUPERFAMILY SSF53041 8 141 9.29E-40 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RM25_RS01590 ff0f395cbd4148550aa71670f2b89f29 191 Gene3D G3DSA:3.40.50.1390 8 125 9.7E-37 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RM25_RS01590 ff0f395cbd4148550aa71670f2b89f29 191 Pfam PF02796 Helix-turn-helix domain of resolvase 143 180 1.6E-7 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 RM25_RS01590 ff0f395cbd4148550aa71670f2b89f29 191 SMART SM00857 8 141 5.3E-51 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RM25_RS01590 ff0f395cbd4148550aa71670f2b89f29 191 Gene3D G3DSA:1.10.10.60 143 183 2.0E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS01590 ff0f395cbd4148550aa71670f2b89f29 191 PANTHER PTHR30461 9 184 1.8E-39 T 22-04-2016 RM25_RS01590 ff0f395cbd4148550aa71670f2b89f29 191 SUPERFAMILY SSF46689 143 183 2.69E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS01590 ff0f395cbd4148550aa71670f2b89f29 191 Pfam PF00239 Resolvase, N terminal domain 9 141 1.6E-39 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RM25_RS01590 ff0f395cbd4148550aa71670f2b89f29 191 ProSitePatterns PS00397 Site-specific recombinases active site. 11 19 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 Gene3D G3DSA:3.40.50.300 666 781 1.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 Gene3D G3DSA:3.40.50.300 79 80 7.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 Gene3D G3DSA:3.40.50.300 355 469 7.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 Gene3D G3DSA:3.40.50.300 487 539 1.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 Gene3D G3DSA:3.40.50.300 6 46 7.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 Gene3D G3DSA:1.20.1580.10 542 665 8.5E-31 T 22-04-2016 RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 Pfam PF00005 ABC transporter 495 703 1.6E-8 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 Gene3D G3DSA:1.20.1580.10 289 354 1.4E-30 T 22-04-2016 RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 Gene3D G3DSA:1.20.1580.10 97 175 1.4E-30 T 22-04-2016 RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 PANTHER PTHR32282:SF10 6 783 0.0 T 22-04-2016 RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 ProSitePatterns PS00211 ABC transporters family signature. 364 378 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 ProSitePatterns PS00211 ABC transporters family signature. 675 689 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 Gene3D G3DSA:1.10.8.280 179 288 1.5E-6 T 22-04-2016 RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 SUPERFAMILY SSF52540 193 245 7.53E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 SUPERFAMILY SSF52540 351 453 7.53E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 SUPERFAMILY SSF52540 12 126 7.53E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 SUPERFAMILY SSF52540 488 755 7.72E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03675 4cc9f4b17797e0cd43d2afe6ff5cb6ec 784 PANTHER PTHR32282 6 783 0.0 T 22-04-2016 RM25_RS03225 94bdd1c81e5058119b01d72ef6023e94 310 Gene3D G3DSA:3.90.226.10 4 184 4.8E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS03225 94bdd1c81e5058119b01d72ef6023e94 310 PANTHER PTHR11941:SF53 5 188 1.3E-67 T 22-04-2016 RM25_RS03225 94bdd1c81e5058119b01d72ef6023e94 310 PANTHER PTHR11941:SF53 212 292 1.3E-67 T 22-04-2016 RM25_RS03225 94bdd1c81e5058119b01d72ef6023e94 310 Pfam PF16113 Enoyl-CoA hydratase/isomerase 15 184 8.8E-57 T 22-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 RM25_RS03225 94bdd1c81e5058119b01d72ef6023e94 310 Pfam PF16113 Enoyl-CoA hydratase/isomerase 194 307 1.1E-23 T 22-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 RM25_RS03225 94bdd1c81e5058119b01d72ef6023e94 310 SUPERFAMILY SSF52096 216 295 2.6E-53 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS03225 94bdd1c81e5058119b01d72ef6023e94 310 SUPERFAMILY SSF52096 4 185 2.6E-53 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS03225 94bdd1c81e5058119b01d72ef6023e94 310 PANTHER PTHR11941 5 188 1.3E-67 T 22-04-2016 RM25_RS03225 94bdd1c81e5058119b01d72ef6023e94 310 PANTHER PTHR11941 212 292 1.3E-67 T 22-04-2016 RM25_RS07090 43c227f550d9e6805cbc617f68eb8baf 322 PANTHER PTHR30135 9 313 7.9E-91 T 22-04-2016 RM25_RS07090 43c227f550d9e6805cbc617f68eb8baf 322 Hamap MF_00973 Gluconeogenesis factor. 5 315 28.849 T 22-04-2016 IPR010119 Gluconeogenesis factor RM25_RS07090 43c227f550d9e6805cbc617f68eb8baf 322 Pfam PF01933 Uncharacterised protein family UPF0052 9 287 7.0E-63 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 RM25_RS07090 43c227f550d9e6805cbc617f68eb8baf 322 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 309 5.9E-76 T 22-04-2016 IPR010119 Gluconeogenesis factor RM25_RS07090 43c227f550d9e6805cbc617f68eb8baf 322 Gene3D G3DSA:3.40.50.10680 83 314 1.5E-38 T 22-04-2016 RM25_RS07090 43c227f550d9e6805cbc617f68eb8baf 322 SUPERFAMILY SSF142338 7 309 3.79E-78 T 22-04-2016 RM25_RS07090 43c227f550d9e6805cbc617f68eb8baf 322 PANTHER PTHR30135:SF3 9 313 7.9E-91 T 22-04-2016 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 ProSitePatterns PS00450 Aconitase family signature 1. 419 435 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 Gene3D G3DSA:3.30.499.10 364 567 8.0E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 Pfam PF00330 Aconitase family (aconitate hydratase) 71 554 1.9E-177 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 SUPERFAMILY SSF52016 623 887 2.94E-82 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 Pfam PF00694 Aconitase C-terminal domain 684 813 2.2E-43 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 Gene3D G3DSA:3.20.19.10 629 887 5.6E-74 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 Gene3D G3DSA:3.40.1060.10 245 362 1.2E-36 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 SUPERFAMILY SSF53732 3 619 1.7E-217 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 28 887 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 Gene3D G3DSA:3.30.499.10 28 244 5.3E-73 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PRINTS PR00415 Aconitase family signature 212 227 8.3E-38 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PRINTS PR00415 Aconitase family signature 165 173 8.3E-38 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PRINTS PR00415 Aconitase family signature 141 154 8.3E-38 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PRINTS PR00415 Aconitase family signature 274 287 8.3E-38 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PRINTS PR00415 Aconitase family signature 367 381 8.3E-38 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PRINTS PR00415 Aconitase family signature 198 211 8.3E-38 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PRINTS PR00415 Aconitase family signature 288 301 8.3E-38 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PRINTS PR00415 Aconitase family signature 423 434 8.3E-38 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PRINTS PR00415 Aconitase family signature 485 498 8.3E-38 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PANTHER PTHR11670:SF1 745 890 0.0 T 22-04-2016 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PANTHER PTHR11670:SF1 408 643 0.0 T 22-04-2016 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PANTHER PTHR11670:SF1 1 388 0.0 T 22-04-2016 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PANTHER PTHR11670:SF1 659 704 0.0 T 22-04-2016 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PANTHER PTHR11670 745 890 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PANTHER PTHR11670 408 643 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PANTHER PTHR11670 1 388 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04575 4ddd1c332b0ac94a6dcc763231da2b6c 890 PANTHER PTHR11670 659 704 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS03090 eb4ce93171d30e23ced818a54f2496e0 313 SMART SM00829 10 309 1.1E-9 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RM25_RS03090 eb4ce93171d30e23ced818a54f2496e0 313 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 85 1.3E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RM25_RS03090 eb4ce93171d30e23ced818a54f2496e0 313 SUPERFAMILY SSF51735 118 252 1.03E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS03090 eb4ce93171d30e23ced818a54f2496e0 313 SUPERFAMILY SSF50129 3 148 3.3E-26 T 22-04-2016 IPR011032 GroES-like RM25_RS03090 eb4ce93171d30e23ced818a54f2496e0 313 Pfam PF00107 Zinc-binding dehydrogenase 155 242 3.5E-14 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RM25_RS03090 eb4ce93171d30e23ced818a54f2496e0 313 PANTHER PTHR11695 15 313 7.8E-53 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RM25_RS03090 eb4ce93171d30e23ced818a54f2496e0 313 Gene3D G3DSA:3.90.180.10 1 192 4.9E-43 T 22-04-2016 IPR011032 GroES-like RM25_RS00285 393767636f83f61d156fd7ab062d7274 263 PANTHER PTHR22916 10 252 1.8E-37 T 22-04-2016 RM25_RS00285 393767636f83f61d156fd7ab062d7274 263 Pfam PF00535 Glycosyl transferase family 2 15 180 2.7E-26 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RM25_RS00285 393767636f83f61d156fd7ab062d7274 263 SUPERFAMILY SSF53448 13 227 3.94E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS00285 393767636f83f61d156fd7ab062d7274 263 Gene3D G3DSA:3.90.550.10 13 252 3.7E-39 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS09880 ba3c8b078ad7c6316db268062b8d9656 336 Pfam PF00092 von Willebrand factor type A domain 98 268 2.5E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS09880 ba3c8b078ad7c6316db268062b8d9656 336 SUPERFAMILY SSF53300 96 269 1.38E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS09880 ba3c8b078ad7c6316db268062b8d9656 336 Gene3D G3DSA:3.40.50.410 96 270 3.8E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS09880 ba3c8b078ad7c6316db268062b8d9656 336 SMART SM00327 96 284 4.8E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS10215 da2660ade7eb0c2fae395aeec53b07ae 251 Pfam PF00005 ABC transporter 22 174 2.6E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS10215 da2660ade7eb0c2fae395aeec53b07ae 251 PIRSF PIRSF039085 4 250 4.7E-109 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RM25_RS10215 da2660ade7eb0c2fae395aeec53b07ae 251 SUPERFAMILY SSF52540 7 244 6.01E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10215 da2660ade7eb0c2fae395aeec53b07ae 251 PANTHER PTHR24220:SF447 8 251 3.9E-125 T 22-04-2016 RM25_RS10215 da2660ade7eb0c2fae395aeec53b07ae 251 PANTHER PTHR24220 8 251 3.9E-125 T 22-04-2016 RM25_RS10215 da2660ade7eb0c2fae395aeec53b07ae 251 SMART SM00382 31 222 1.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS10215 da2660ade7eb0c2fae395aeec53b07ae 251 Gene3D G3DSA:3.40.50.300 6 246 2.3E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10215 da2660ade7eb0c2fae395aeec53b07ae 251 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS09595 125c3fee06151732493e7bf528e7e54b 300 SUPERFAMILY SSF144083 236 295 1.12E-13 T 22-04-2016 RM25_RS09595 125c3fee06151732493e7bf528e7e54b 300 PANTHER PTHR21535 23 296 3.1E-47 T 22-04-2016 RM25_RS09595 125c3fee06151732493e7bf528e7e54b 300 PANTHER PTHR21535:SF40 23 296 3.1E-47 T 22-04-2016 RM25_RS09595 125c3fee06151732493e7bf528e7e54b 300 Gene3D G3DSA:1.20.58.340 225 296 3.9E-18 T 22-04-2016 RM25_RS09595 125c3fee06151732493e7bf528e7e54b 300 SUPERFAMILY SSF143865 5 235 2.22E-29 T 22-04-2016 RM25_RS09595 125c3fee06151732493e7bf528e7e54b 300 Pfam PF01544 CorA-like Mg2+ transporter protein 8 295 1.2E-59 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RM25_RS02445 ba12c049b4d6348bed980f468b0e143d 313 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 165 311 2.5E-34 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RM25_RS02445 ba12c049b4d6348bed980f468b0e143d 313 PANTHER PTHR22748 165 313 2.3E-61 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RM25_RS02445 ba12c049b4d6348bed980f468b0e143d 313 PANTHER PTHR22748 2 146 2.3E-61 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RM25_RS02445 ba12c049b4d6348bed980f468b0e143d 313 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 304 7.8E-28 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RM25_RS02445 ba12c049b4d6348bed980f468b0e143d 313 SUPERFAMILY SSF56219 2 86 5.23E-58 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RM25_RS02445 ba12c049b4d6348bed980f468b0e143d 313 SUPERFAMILY SSF56219 116 313 5.23E-58 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RM25_RS02445 ba12c049b4d6348bed980f468b0e143d 313 Gene3D G3DSA:3.60.10.10 2 312 2.5E-73 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RM25_RS11465 6a82359d3431c752b6b82b52a9fa426b 295 Pfam PF00274 Fructose-bisphosphate aldolase class-I 9 179 1.4E-7 T 22-04-2016 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS11465 6a82359d3431c752b6b82b52a9fa426b 295 SUPERFAMILY SSF51569 4 293 1.05E-87 T 22-04-2016 RM25_RS11465 6a82359d3431c752b6b82b52a9fa426b 295 PANTHER PTHR11627 9 178 2.8E-28 T 22-04-2016 RM25_RS11465 6a82359d3431c752b6b82b52a9fa426b 295 Gene3D G3DSA:3.20.20.70 1 293 1.8E-95 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS03910 c1379fcc96f43875c7f5078e474bf96f 470 SUPERFAMILY SSF53623 3 290 1.49E-86 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS03910 c1379fcc96f43875c7f5078e474bf96f 470 Pfam PF02875 Mur ligase family, glutamate ligase domain 293 366 8.1E-12 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS03910 c1379fcc96f43875c7f5078e474bf96f 470 Gene3D G3DSA:3.90.190.20 294 431 3.5E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS03910 c1379fcc96f43875c7f5078e474bf96f 470 PIRSF PIRSF001563 2 435 5.1E-115 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RM25_RS03910 c1379fcc96f43875c7f5078e474bf96f 470 SUPERFAMILY SSF53244 293 430 8.06E-25 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS03910 c1379fcc96f43875c7f5078e474bf96f 470 TIGRFAM TIGR01499 folC: bifunctional protein FolC 18 429 2.0E-107 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RM25_RS03910 c1379fcc96f43875c7f5078e474bf96f 470 Gene3D G3DSA:3.40.1190.10 13 291 2.8E-90 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS03910 c1379fcc96f43875c7f5078e474bf96f 470 PANTHER PTHR11136 7 440 1.7E-121 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RM25_RS03910 c1379fcc96f43875c7f5078e474bf96f 470 PANTHER PTHR11136:SF0 7 440 1.7E-121 T 22-04-2016 RM25_RS03910 c1379fcc96f43875c7f5078e474bf96f 470 Pfam PF08245 Mur ligase middle domain 40 268 5.1E-14 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS00650 2610a5e0d0102a1c1e86fa2fba694c8b 518 PANTHER PTHR10196:SF41 15 512 7.8E-64 T 22-04-2016 RM25_RS00650 2610a5e0d0102a1c1e86fa2fba694c8b 518 Gene3D G3DSA:3.30.420.40 284 512 3.2E-29 T 22-04-2016 RM25_RS00650 2610a5e0d0102a1c1e86fa2fba694c8b 518 SUPERFAMILY SSF53067 36 283 3.2E-38 T 22-04-2016 RM25_RS00650 2610a5e0d0102a1c1e86fa2fba694c8b 518 SUPERFAMILY SSF53067 282 511 2.29E-31 T 22-04-2016 RM25_RS00650 2610a5e0d0102a1c1e86fa2fba694c8b 518 PANTHER PTHR10196 15 512 7.8E-64 T 22-04-2016 RM25_RS00650 2610a5e0d0102a1c1e86fa2fba694c8b 518 Gene3D G3DSA:3.30.420.40 35 280 4.2E-37 T 22-04-2016 RM25_RS00650 2610a5e0d0102a1c1e86fa2fba694c8b 518 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 323 471 2.4E-20 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RM25_RS00650 2610a5e0d0102a1c1e86fa2fba694c8b 518 PIRSF PIRSF000538 34 515 5.5E-67 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RM25_RS00650 2610a5e0d0102a1c1e86fa2fba694c8b 518 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 37 243 2.7E-28 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RM25_RS09210 0c38e90ef89cbdfe3d32e1df62b5cfd7 479 SUPERFAMILY SSF81606 2 233 4.32E-57 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RM25_RS09210 0c38e90ef89cbdfe3d32e1df62b5cfd7 479 Pfam PF13672 Protein phosphatase 2C 17 201 2.7E-9 T 22-04-2016 RM25_RS09210 0c38e90ef89cbdfe3d32e1df62b5cfd7 479 SMART SM00331 9 234 6.7E-23 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RM25_RS09210 0c38e90ef89cbdfe3d32e1df62b5cfd7 479 Gene3D G3DSA:3.60.40.10 3 234 8.3E-61 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RM25_RS09210 0c38e90ef89cbdfe3d32e1df62b5cfd7 479 SMART SM00332 1 232 3.7E-6 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RM25_RS09210 0c38e90ef89cbdfe3d32e1df62b5cfd7 479 PANTHER PTHR13832:SF226 1 254 1.7E-49 T 22-04-2016 RM25_RS09210 0c38e90ef89cbdfe3d32e1df62b5cfd7 479 PANTHER PTHR13832 1 254 1.7E-49 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 RM25_RS04105 3d2c92f26d84b2c6b627657f0ae5b8d0 249 PANTHER PTHR30027 5 245 4.8E-47 T 22-04-2016 RM25_RS04105 3d2c92f26d84b2c6b627657f0ae5b8d0 249 PIRSF PIRSF015601 12 241 1.9E-42 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS04105 3d2c92f26d84b2c6b627657f0ae5b8d0 249 Gene3D G3DSA:3.40.1280.10 13 240 1.4E-60 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RM25_RS04105 3d2c92f26d84b2c6b627657f0ae5b8d0 249 Pfam PF04452 RNA methyltransferase 21 237 2.9E-53 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS04105 3d2c92f26d84b2c6b627657f0ae5b8d0 249 SUPERFAMILY SSF75217 78 239 2.88E-40 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RM25_RS04105 3d2c92f26d84b2c6b627657f0ae5b8d0 249 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 19 238 6.2E-32 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS04105 3d2c92f26d84b2c6b627657f0ae5b8d0 249 PANTHER PTHR30027:SF3 5 245 4.8E-47 T 22-04-2016 RM25_RS04105 3d2c92f26d84b2c6b627657f0ae5b8d0 249 SUPERFAMILY SSF88697 15 69 4.22E-9 T 22-04-2016 IPR015947 PUA-like domain RM25_RS01495 67c2a7da0694aa522775df52fe1df8d0 565 PANTHER PTHR10566 8 565 8.7E-136 T 22-04-2016 RM25_RS01495 67c2a7da0694aa522775df52fe1df8d0 565 Gene3D G3DSA:3.90.1200.10 255 328 2.0E-6 T 22-04-2016 RM25_RS01495 67c2a7da0694aa522775df52fe1df8d0 565 SUPERFAMILY SSF56112 365 452 1.3E-21 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS01495 67c2a7da0694aa522775df52fe1df8d0 565 SUPERFAMILY SSF56112 93 163 1.3E-21 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS01495 67c2a7da0694aa522775df52fe1df8d0 565 SUPERFAMILY SSF56112 198 326 1.3E-21 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS01495 67c2a7da0694aa522775df52fe1df8d0 565 Pfam PF03109 ABC1 family 111 235 1.9E-32 T 22-04-2016 IPR004147 UbiB domain RM25_RS01495 67c2a7da0694aa522775df52fe1df8d0 565 PANTHER PTHR10566:SF10 8 565 8.7E-136 T 22-04-2016 RM25_RS11975 9ab625416053bf2169c5b6b5a9c80c16 460 SMART SM00409 193 275 1.9E-4 T 22-04-2016 IPR003599 Immunoglobulin subtype RM25_RS11975 9ab625416053bf2169c5b6b5a9c80c16 460 PANTHER PTHR10489 186 277 7.8E-13 T 22-04-2016 RM25_RS11975 9ab625416053bf2169c5b6b5a9c80c16 460 SUPERFAMILY SSF48726 186 279 8.85E-16 T 22-04-2016 IPR007110 Immunoglobulin-like domain GO:0005515 RM25_RS11975 9ab625416053bf2169c5b6b5a9c80c16 460 Pfam PF00395 S-layer homology domain 409 452 2.2E-7 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS11975 9ab625416053bf2169c5b6b5a9c80c16 460 Pfam PF00395 S-layer homology domain 347 390 1.5E-10 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS11975 9ab625416053bf2169c5b6b5a9c80c16 460 Pfam PF13927 Immunoglobulin domain 187 260 7.5E-12 T 22-04-2016 RM25_RS11975 9ab625416053bf2169c5b6b5a9c80c16 460 Gene3D G3DSA:2.60.40.10 186 279 6.8E-16 T 22-04-2016 IPR013783 Immunoglobulin-like fold RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 2 435 1.1E-98 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 PRINTS PR00171 Sugar transporter signature 91 110 3.1E-19 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 PRINTS PR00171 Sugar transporter signature 365 377 3.1E-19 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 PRINTS PR00171 Sugar transporter signature 3 13 3.1E-19 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 PRINTS PR00171 Sugar transporter signature 342 363 3.1E-19 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 PRINTS PR00171 Sugar transporter signature 252 262 3.1E-19 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 Pfam PF00083 Sugar (and other) transporter 2 440 1.4E-105 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 96 121 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 PANTHER PTHR23500 1 443 7.9E-170 T 22-04-2016 RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 Gene3D G3DSA:1.20.1250.20 6 188 3.4E-23 T 22-04-2016 RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 Gene3D G3DSA:1.20.1250.20 239 438 3.4E-18 T 22-04-2016 RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 PANTHER PTHR23500:SF141 1 443 7.9E-170 T 22-04-2016 RM25_RS00495 d9085e9f68b9b0a19e30a4848adbfa6a 451 SUPERFAMILY SSF103473 2 438 9.55E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 SUPERFAMILY SSF55326 41 203 7.33E-45 T 22-04-2016 RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 PANTHER PTHR10099:SF2 16 752 3.8E-295 T 22-04-2016 RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 SUPERFAMILY SSF56042 210 440 1.12E-49 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 SUPERFAMILY SSF55326 408 578 8.37E-51 T 22-04-2016 RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 Pfam PF00586 AIR synthase related protein, N-terminal domain 97 199 1.2E-22 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 Pfam PF00586 AIR synthase related protein, N-terminal domain 468 573 2.2E-21 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 23 751 1.1E-246 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 Gene3D G3DSA:3.30.1330.10 55 203 2.1E-45 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 Gene3D G3DSA:3.30.1330.10 428 577 5.4E-52 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 SUPERFAMILY SSF56042 582 751 3.14E-38 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 PANTHER PTHR10099 16 752 3.8E-295 T 22-04-2016 RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 754 287.506 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 PIRSF PIRSF001587 7 754 2.3E-277 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 Pfam PF02769 AIR synthase related protein, C-terminal domain 587 724 1.3E-15 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RM25_RS02120 54fdb84e936b3671ab1faed6fe40a9ea 754 Pfam PF02769 AIR synthase related protein, C-terminal domain 213 366 7.5E-34 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RM25_RS00855 9cb3e6832bc7cd28857aa7f41895f8e2 104 SUPERFAMILY SSF55729 4 95 2.02E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS00855 9cb3e6832bc7cd28857aa7f41895f8e2 104 Pfam PF14542 GCN5-related N-acetyl-transferase 14 93 1.4E-22 T 22-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase RM25_RS00855 9cb3e6832bc7cd28857aa7f41895f8e2 104 Gene3D G3DSA:3.40.630.30 4 96 1.3E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS00855 9cb3e6832bc7cd28857aa7f41895f8e2 104 PANTHER PTHR31435 6 99 8.6E-25 T 22-04-2016 RM25_RS10350 738db6259e29e882a338bbf526cd8dc5 259 PANTHER PTHR30535 3 244 6.1E-53 T 22-04-2016 RM25_RS10350 738db6259e29e882a338bbf526cd8dc5 259 Gene3D G3DSA:3.40.50.1980 15 128 3.6E-15 T 22-04-2016 RM25_RS10350 738db6259e29e882a338bbf526cd8dc5 259 PANTHER PTHR30535:SF6 3 244 6.1E-53 T 22-04-2016 RM25_RS10350 738db6259e29e882a338bbf526cd8dc5 259 SUPERFAMILY SSF53807 14 258 2.2E-24 T 22-04-2016 RM25_RS00410 a50d99cf1ab8575ef95dc516d80ade10 436 PANTHER PTHR33498 43 434 5.9E-21 T 22-04-2016 RM25_RS00410 a50d99cf1ab8575ef95dc516d80ade10 436 Pfam PF01610 Transposase 164 419 3.1E-63 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS00410 a50d99cf1ab8575ef95dc516d80ade10 436 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 88 3.7E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS00410 a50d99cf1ab8575ef95dc516d80ade10 436 PANTHER PTHR33498:SF1 43 434 5.9E-21 T 22-04-2016 RM25_RS05550 50dc3fe001248aedd3b0e1e5b5aaf7e8 349 PANTHER PTHR12561 66 347 5.1E-83 T 22-04-2016 RM25_RS05550 50dc3fe001248aedd3b0e1e5b5aaf7e8 349 SUPERFAMILY SSF55681 99 346 1.42E-65 T 22-04-2016 RM25_RS05550 50dc3fe001248aedd3b0e1e5b5aaf7e8 349 PANTHER PTHR12561:SF7 66 347 5.1E-83 T 22-04-2016 RM25_RS05550 50dc3fe001248aedd3b0e1e5b5aaf7e8 349 Pfam PF03099 Biotin/lipoate A/B protein ligase family 154 263 1.0E-8 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RM25_RS05550 50dc3fe001248aedd3b0e1e5b5aaf7e8 349 Gene3D G3DSA:3.90.1550.10 97 347 3.7E-65 T 22-04-2016 RM25_RS05105 335eac1df0c823ac7ef9092414d582fe 181 PANTHER PTHR33317 22 173 2.8E-25 T 22-04-2016 RM25_RS05105 335eac1df0c823ac7ef9092414d582fe 181 SMART SM00732 22 120 3.6E-15 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RM25_RS05105 335eac1df0c823ac7ef9092414d582fe 181 Gene3D G3DSA:3.30.420.140 22 159 2.3E-37 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RM25_RS05105 335eac1df0c823ac7ef9092414d582fe 181 Pfam PF03652 Holliday junction resolvase 23 152 2.4E-33 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RM25_RS05105 335eac1df0c823ac7ef9092414d582fe 181 PANTHER PTHR33317:SF1 22 173 2.8E-25 T 22-04-2016 RM25_RS05105 335eac1df0c823ac7ef9092414d582fe 181 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 22 155 18.603 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RM25_RS05105 335eac1df0c823ac7ef9092414d582fe 181 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 25 151 4.8E-27 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RM25_RS05105 335eac1df0c823ac7ef9092414d582fe 181 SUPERFAMILY SSF53098 23 153 2.28E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 527 595 3.4E-6 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 SUPERFAMILY SSF52518 243 510 2.86E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 SUPERFAMILY SSF53323 24 238 1.44E-17 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 Gene3D G3DSA:3.40.50.970 237 434 2.2E-71 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 264 442 9.2E-53 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 PANTHER PTHR32154 17 240 1.8E-207 T 22-04-2016 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 PANTHER PTHR32154 465 630 1.8E-207 T 22-04-2016 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 PANTHER PTHR32154 263 429 1.8E-207 T 22-04-2016 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 Gene3D G3DSA:3.40.50.920 526 603 1.1E-8 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 Gene3D G3DSA:3.40.920.10 21 221 2.3E-24 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 30 218 8.5E-26 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 22 620 6.8E-187 T 22-04-2016 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969|UniPathway: UPA00223 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 SUPERFAMILY SSF52922 526 624 1.57E-12 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 PANTHER PTHR32154:SF14 17 240 1.8E-207 T 22-04-2016 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 PANTHER PTHR32154:SF14 465 630 1.8E-207 T 22-04-2016 RM25_RS02430 d6dc98b6fbc34f4db8fa33436db47f32 635 PANTHER PTHR32154:SF14 263 429 1.8E-207 T 22-04-2016 RM25_RS11060 1ef62793923fbfc66d094c97a418b5a9 326 Gene3D G3DSA:1.10.3720.10 57 314 4.6E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11060 1ef62793923fbfc66d094c97a418b5a9 326 PANTHER PTHR32243 62 326 1.3E-101 T 22-04-2016 RM25_RS11060 1ef62793923fbfc66d094c97a418b5a9 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 320 3.6E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11060 1ef62793923fbfc66d094c97a418b5a9 326 SUPERFAMILY SSF161098 55 325 3.79E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11060 1ef62793923fbfc66d094c97a418b5a9 326 PANTHER PTHR32243:SF7 62 326 1.3E-101 T 22-04-2016 RM25_RS09040 80694f80cd0d641f2b64c098a3875457 455 PANTHER PTHR11986:SF5 1 455 5.4E-130 T 22-04-2016 RM25_RS09040 80694f80cd0d641f2b64c098a3875457 455 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 262 298 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS09040 80694f80cd0d641f2b64c098a3875457 455 PANTHER PTHR11986 1 455 5.4E-130 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS09040 80694f80cd0d641f2b64c098a3875457 455 SUPERFAMILY SSF53383 22 449 2.7E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS09040 80694f80cd0d641f2b64c098a3875457 455 Gene3D G3DSA:3.90.1150.10 346 450 1.7E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS09040 80694f80cd0d641f2b64c098a3875457 455 Gene3D G3DSA:3.90.1150.10 21 88 1.7E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS09040 80694f80cd0d641f2b64c098a3875457 455 Pfam PF00202 Aminotransferase class-III 50 370 2.9E-59 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS09040 80694f80cd0d641f2b64c098a3875457 455 Gene3D G3DSA:3.40.640.10 89 340 1.5E-67 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 PANTHER PTHR11652 2 116 2.1E-73 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 8.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 8.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 8.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 8.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 8.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 8.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 Gene3D G3DSA:2.40.50.140 2 123 5.5E-64 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 PIRSF PIRSF002133 1 123 1.8E-53 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 123 1.3E-66 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.489 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 SUPERFAMILY SSF50249 2 123 3.86E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS02565 2e2f5add0f6a8ac261b0e83a78af9a9c 123 Pfam PF00164 Ribosomal protein S12/S23 3 123 9.4E-44 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS09390 380a96896e9f6e9d1a0f6ad29c36c261 311 Gene3D G3DSA:1.10.3720.10 30 303 1.1E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS09390 380a96896e9f6e9d1a0f6ad29c36c261 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 302 5.4E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS09390 380a96896e9f6e9d1a0f6ad29c36c261 311 PANTHER PTHR30425 14 310 8.2E-98 T 22-04-2016 RM25_RS09390 380a96896e9f6e9d1a0f6ad29c36c261 311 SUPERFAMILY SSF161098 39 295 4.06E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS09390 380a96896e9f6e9d1a0f6ad29c36c261 311 PANTHER PTHR30425:SF1 14 310 8.2E-98 T 22-04-2016 RM25_RS09390 380a96896e9f6e9d1a0f6ad29c36c261 311 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 20 302 6.9E-79 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 RM25_RS00505 cd968a4a3c2cffceb8bf88630ec27ce7 329 Gene3D G3DSA:1.10.260.40 1 50 3.5E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS00505 cd968a4a3c2cffceb8bf88630ec27ce7 329 Gene3D G3DSA:3.40.50.2300 166 300 2.2E-37 T 22-04-2016 RM25_RS00505 cd968a4a3c2cffceb8bf88630ec27ce7 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 44 1.3E-11 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RM25_RS00505 cd968a4a3c2cffceb8bf88630ec27ce7 329 Gene3D G3DSA:3.40.50.2300 51 165 1.0E-21 T 22-04-2016 RM25_RS00505 cd968a4a3c2cffceb8bf88630ec27ce7 329 PANTHER PTHR30146 1 329 1.0E-74 T 22-04-2016 RM25_RS00505 cd968a4a3c2cffceb8bf88630ec27ce7 329 SUPERFAMILY SSF53822 67 326 3.14E-46 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RM25_RS00505 cd968a4a3c2cffceb8bf88630ec27ce7 329 SMART SM00354 1 68 6.0E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RM25_RS00505 cd968a4a3c2cffceb8bf88630ec27ce7 329 Pfam PF13377 Periplasmic binding protein-like domain 162 323 1.6E-33 T 22-04-2016 RM25_RS00505 cd968a4a3c2cffceb8bf88630ec27ce7 329 SUPERFAMILY SSF47413 1 56 1.03E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS09735 7f98991655a467ce25e3102508b7dc4b 247 Pfam PF00482 Type II secretion system (T2SS), protein F 112 232 1.7E-8 T 22-04-2016 IPR018076 Type II secretion system F domain RM25_RS09735 7f98991655a467ce25e3102508b7dc4b 247 PANTHER PTHR35007 55 247 1.7E-12 T 22-04-2016 RM25_RS00760 2db35503fd385d8bfa5a30ee94b5d0b1 474 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 465 71.568 T 22-04-2016 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS00760 2db35503fd385d8bfa5a30ee94b5d0b1 474 Gene3D G3DSA:3.90.1260.10 176 373 2.6E-62 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS00760 2db35503fd385d8bfa5a30ee94b5d0b1 474 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS00760 2db35503fd385d8bfa5a30ee94b5d0b1 474 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 2.3E-136 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS00760 2db35503fd385d8bfa5a30ee94b5d0b1 474 SUPERFAMILY SSF52402 5 187 1.4E-28 T 22-04-2016 RM25_RS00760 2db35503fd385d8bfa5a30ee94b5d0b1 474 PANTHER PTHR11587:SF2 1 426 3.1E-157 T 22-04-2016 RM25_RS00760 2db35503fd385d8bfa5a30ee94b5d0b1 474 Gene3D G3DSA:3.40.50.620 4 175 7.8E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS00760 2db35503fd385d8bfa5a30ee94b5d0b1 474 Pfam PF00764 Arginosuccinate synthase 16 393 7.7E-58 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS00760 2db35503fd385d8bfa5a30ee94b5d0b1 474 SUPERFAMILY SSF69864 190 434 5.89E-75 T 22-04-2016 RM25_RS00760 2db35503fd385d8bfa5a30ee94b5d0b1 474 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS00760 2db35503fd385d8bfa5a30ee94b5d0b1 474 PANTHER PTHR11587 1 426 3.1E-157 T 22-04-2016 RM25_RS00760 2db35503fd385d8bfa5a30ee94b5d0b1 474 Gene3D G3DSA:1.10.287.400 377 437 4.5E-29 T 22-04-2016 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RM25_RS03935 a94fb8bcf7b2bb54ffaf6bc681d67072 385 PANTHER PTHR30238 1 331 6.8E-138 T 22-04-2016 RM25_RS03935 a94fb8bcf7b2bb54ffaf6bc681d67072 385 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 3 317 3.0E-107 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 RM25_RS03935 a94fb8bcf7b2bb54ffaf6bc681d67072 385 PANTHER PTHR30238:SF0 1 331 6.8E-138 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 RM25_RS03935 a94fb8bcf7b2bb54ffaf6bc681d67072 385 Pfam PF03741 Integral membrane protein TerC family 68 273 1.5E-46 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RM25_RS07045 24c5b2ec479feab0a86b3181ce6260fd 247 PANTHER PTHR11054 1 241 2.7E-38 T 22-04-2016 RM25_RS07045 24c5b2ec479feab0a86b3181ce6260fd 247 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 10 239 3.3E-44 T 22-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RM25_RS07045 24c5b2ec479feab0a86b3181ce6260fd 247 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 12 230 1.0E-51 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RM25_RS07045 24c5b2ec479feab0a86b3181ce6260fd 247 Gene3D G3DSA:3.40.50.1360 7 240 3.6E-53 T 22-04-2016 RM25_RS07045 24c5b2ec479feab0a86b3181ce6260fd 247 SUPERFAMILY SSF100950 7 242 5.98E-49 T 22-04-2016 RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 SUPERFAMILY SSF53927 213 517 5.11E-113 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 Gene3D G3DSA:3.40.140.20 367 507 4.9E-48 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 SUPERFAMILY SSF52335 9 198 2.15E-64 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 Pfam PF01808 AICARFT/IMPCHase bienzyme 140 451 8.1E-109 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 Pfam PF02142 MGS-like domain 22 134 7.2E-22 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 10 517 2.4E-166 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 SMART SM00851 21 135 6.3E-49 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 PANTHER PTHR11692 7 517 1.3E-256 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 Gene3D G3DSA:3.40.140.20 244 358 5.5E-44 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 PIRSF PIRSF000414 3 517 9.8E-193 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 PANTHER PTHR11692:SF2 7 517 1.3E-256 T 22-04-2016 RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 SMART SM00798 140 452 1.2E-168 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 9 517 41.152 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RM25_RS03160 62776d5f317ab2cc01e51aea9e43fc88 517 Gene3D G3DSA:3.40.50.1380 8 190 2.2E-76 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RM25_RS03500 c7dfa3e955e389c6efd1e2a77754cebc 511 SUPERFAMILY SSF52518 366 508 1.01E-11 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS03500 c7dfa3e955e389c6efd1e2a77754cebc 511 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 172 2.9E-23 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RM25_RS03500 c7dfa3e955e389c6efd1e2a77754cebc 511 PIRSF PIRSF004983 1 509 8.9E-105 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 RM25_RS03500 c7dfa3e955e389c6efd1e2a77754cebc 511 Gene3D G3DSA:3.40.50.970 376 507 1.3E-12 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS03500 c7dfa3e955e389c6efd1e2a77754cebc 511 PANTHER PTHR18968 1 506 4.4E-82 T 22-04-2016 RM25_RS03500 c7dfa3e955e389c6efd1e2a77754cebc 511 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 1 398 3.9E-96 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 RM25_RS03500 c7dfa3e955e389c6efd1e2a77754cebc 511 Gene3D G3DSA:3.40.50.970 1 177 2.2E-39 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS03500 c7dfa3e955e389c6efd1e2a77754cebc 511 PANTHER PTHR18968:SF114 1 506 4.4E-82 T 22-04-2016 RM25_RS03500 c7dfa3e955e389c6efd1e2a77754cebc 511 SUPERFAMILY SSF52518 1 189 3.63E-22 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS03500 c7dfa3e955e389c6efd1e2a77754cebc 511 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 1 510 26.856 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 RM25_RS07710 817758b4e4f70f846e601ae4a07cba2f 425 Pfam PF07690 Major Facilitator Superfamily 44 373 3.7E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS07710 817758b4e4f70f846e601ae4a07cba2f 425 Gene3D G3DSA:1.20.1250.20 227 405 5.1E-10 T 22-04-2016 RM25_RS07710 817758b4e4f70f846e601ae4a07cba2f 425 SUPERFAMILY SSF103473 15 406 4.58E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS07710 817758b4e4f70f846e601ae4a07cba2f 425 PANTHER PTHR23523 9 423 8.6E-101 T 22-04-2016 RM25_RS07710 817758b4e4f70f846e601ae4a07cba2f 425 PANTHER PTHR23523:SF2 9 423 8.6E-101 T 22-04-2016 RM25_RS07710 817758b4e4f70f846e601ae4a07cba2f 425 Gene3D G3DSA:1.20.1250.20 22 208 1.3E-10 T 22-04-2016 RM25_RS04765 921e31b062f0289fecd9efd1460f3eca 481 PANTHER PTHR21343 1 477 2.1E-168 T 22-04-2016 RM25_RS04765 921e31b062f0289fecd9efd1460f3eca 481 PANTHER PTHR21343:SF1 1 477 2.1E-168 T 22-04-2016 RM25_RS04765 921e31b062f0289fecd9efd1460f3eca 481 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 216 7.4E-23 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RM25_RS04765 921e31b062f0289fecd9efd1460f3eca 481 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 480 153.577 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 RM25_RS04765 921e31b062f0289fecd9efd1460f3eca 481 SUPERFAMILY SSF52317 254 433 3.25E-33 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS04765 921e31b062f0289fecd9efd1460f3eca 481 SUPERFAMILY SSF52540 1 236 2.86E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04765 921e31b062f0289fecd9efd1460f3eca 481 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 470 7.8E-123 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 RM25_RS04765 921e31b062f0289fecd9efd1460f3eca 481 Gene3D G3DSA:3.40.50.300 1 230 1.0E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04765 921e31b062f0289fecd9efd1460f3eca 481 Gene3D G3DSA:3.40.50.880 254 433 6.9E-32 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS04765 921e31b062f0289fecd9efd1460f3eca 481 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 422 7.3E-37 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 SUPERFAMILY SSF52374 2 284 2.05E-82 T 22-04-2016 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 Gene3D G3DSA:3.90.800.10 47 170 3.6E-32 T 22-04-2016 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 1 461 25.092 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 Gene3D G3DSA:1.10.1160.10 222 307 4.6E-22 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 SUPERFAMILY SSF48163 292 458 5.23E-36 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 298 7.3E-78 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 458 5.3E-121 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 193 8.6E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 PRINTS PR00987 Glutamyl-tRNA synthetase signature 169 179 8.6E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 PRINTS PR00987 Glutamyl-tRNA synthetase signature 14 27 8.6E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 Gene3D G3DSA:3.40.50.620 2 46 4.8E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS02595 a3b69c78082875009dd469e24711a196 464 Gene3D G3DSA:3.40.50.620 171 220 4.8E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS02595 a3b69c78082875009dd469e24711a196 464 PANTHER PTHR11451:SF41 1 347 6.7E-81 T 22-04-2016 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 Gene3D G3DSA:1.10.10.350 369 458 3.0E-19 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RM25_RS02595 a3b69c78082875009dd469e24711a196 464 PANTHER PTHR11451 1 347 6.7E-81 T 22-04-2016 RM25_RS09895 266a6504257dc7c7f200d1e9b9a49cab 100 PANTHER PTHR11603:SF148 26 100 1.4E-21 T 22-04-2016 RM25_RS09895 266a6504257dc7c7f200d1e9b9a49cab 100 PANTHER PTHR11603 26 100 1.4E-21 T 22-04-2016 RM25_RS09895 266a6504257dc7c7f200d1e9b9a49cab 100 Gene3D G3DSA:1.10.8.300 20 97 3.2E-28 T 22-04-2016 RM25_RS02975 53f98786a8dee4074f589e852aa8ee03 245 SUPERFAMILY SSF161098 45 232 1.7E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS02975 53f98786a8dee4074f589e852aa8ee03 245 PANTHER PTHR30177:SF4 17 245 5.7E-65 T 22-04-2016 RM25_RS02975 53f98786a8dee4074f589e852aa8ee03 245 PANTHER PTHR30177 17 245 5.7E-65 T 22-04-2016 RM25_RS02975 53f98786a8dee4074f589e852aa8ee03 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 70 237 1.3E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS02975 53f98786a8dee4074f589e852aa8ee03 245 Gene3D G3DSA:1.10.3720.10 45 240 5.9E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS07325 7e9a05230281df5c39c88b95f9bafe99 312 Pfam PF02219 Methylenetetrahydrofolate reductase 28 304 4.1E-79 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RM25_RS07325 7e9a05230281df5c39c88b95f9bafe99 312 SUPERFAMILY SSF51730 25 305 2.16E-82 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RM25_RS07325 7e9a05230281df5c39c88b95f9bafe99 312 PANTHER PTHR21091:SF31 166 303 1.1E-23 T 22-04-2016 RM25_RS07325 7e9a05230281df5c39c88b95f9bafe99 312 PANTHER PTHR21091 166 303 1.1E-23 T 22-04-2016 RM25_RS07325 7e9a05230281df5c39c88b95f9bafe99 312 Gene3D G3DSA:3.20.20.220 17 306 2.0E-89 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RM25_RS02290 85cb41a1b0701ade0d9ed56df8e6c368 425 PANTHER PTHR23513:SF6 1 417 2.7E-84 T 22-04-2016 RM25_RS02290 85cb41a1b0701ade0d9ed56df8e6c368 425 SUPERFAMILY SSF103473 10 396 1.1E-45 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS02290 85cb41a1b0701ade0d9ed56df8e6c368 425 PANTHER PTHR23513 1 417 2.7E-84 T 22-04-2016 RM25_RS02290 85cb41a1b0701ade0d9ed56df8e6c368 425 Gene3D G3DSA:1.20.1250.20 208 391 7.5E-14 T 22-04-2016 RM25_RS02290 85cb41a1b0701ade0d9ed56df8e6c368 425 Gene3D G3DSA:1.20.1250.20 17 192 1.4E-18 T 22-04-2016 RM25_RS02290 85cb41a1b0701ade0d9ed56df8e6c368 425 Pfam PF05977 Transmembrane secretion effector 2 387 3.0E-43 T 22-04-2016 IPR010290 Transmembrane secretion effector RM25_RS05415 409194db78783840138ef26bec511470 493 PANTHER PTHR11659 3 493 1.5E-210 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 RM25_RS05415 409194db78783840138ef26bec511470 493 SUPERFAMILY SSF89095 346 492 1.83E-26 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RM25_RS05415 409194db78783840138ef26bec511470 493 Gene3D G3DSA:1.10.10.410 434 493 9.8E-6 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RM25_RS05415 409194db78783840138ef26bec511470 493 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 8 492 1.7E-148 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RM25_RS05415 409194db78783840138ef26bec511470 493 SUPERFAMILY SSF55931 12 313 2.68E-112 T 22-04-2016 RM25_RS05415 409194db78783840138ef26bec511470 493 SMART SM00845 345 492 7.4E-55 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RM25_RS05415 409194db78783840138ef26bec511470 493 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 157 171 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 RM25_RS05415 409194db78783840138ef26bec511470 493 PANTHER PTHR11659:SF0 3 493 1.5E-210 T 22-04-2016 RM25_RS05415 409194db78783840138ef26bec511470 493 Pfam PF02934 GatB/GatE catalytic domain 12 305 3.6E-104 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 RM25_RS05415 409194db78783840138ef26bec511470 493 Pfam PF02637 GatB domain 346 492 1.2E-39 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RM25_RS05415 409194db78783840138ef26bec511470 493 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 9 493 35.466 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RM25_RS05560 88944ab3f41e36561b316530b47041c5 155 PANTHER PTHR13822 1 141 1.1E-22 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05560 88944ab3f41e36561b316530b47041c5 155 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 128 17.257 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05560 88944ab3f41e36561b316530b47041c5 155 SUPERFAMILY SSF51344 4 86 1.96E-18 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05560 88944ab3f41e36561b316530b47041c5 155 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 84 9.0E-12 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05560 88944ab3f41e36561b316530b47041c5 155 Gene3D G3DSA:2.60.15.10 5 90 1.3E-20 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05560 88944ab3f41e36561b316530b47041c5 155 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 128 4.8E-25 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05560 88944ab3f41e36561b316530b47041c5 155 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 81 3.1E-23 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS03545 7a7b63d343071edbe17ef2d3d8eb9f2d 272 PANTHER PTHR21198 1 266 5.7E-97 T 22-04-2016 RM25_RS03545 7a7b63d343071edbe17ef2d3d8eb9f2d 272 Hamap MF_00258 Glutamate racemase [murI]. 7 257 35.2 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS03545 7a7b63d343071edbe17ef2d3d8eb9f2d 272 SUPERFAMILY SSF53681 112 256 7.85E-36 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS03545 7a7b63d343071edbe17ef2d3d8eb9f2d 272 Gene3D G3DSA:3.40.50.1860 6 174 9.0E-52 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS03545 7a7b63d343071edbe17ef2d3d8eb9f2d 272 SUPERFAMILY SSF53681 8 110 5.56E-33 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS03545 7a7b63d343071edbe17ef2d3d8eb9f2d 272 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 246 4.8E-66 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS03545 7a7b63d343071edbe17ef2d3d8eb9f2d 272 Pfam PF01177 Asp/Glu/Hydantoin racemase 9 216 2.4E-34 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS03545 7a7b63d343071edbe17ef2d3d8eb9f2d 272 PANTHER PTHR21198:SF2 1 266 5.7E-97 T 22-04-2016 RM25_RS03545 7a7b63d343071edbe17ef2d3d8eb9f2d 272 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 181 191 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS04195 5eb5c8b083e91cd0a34c6f2fb2eede21 376 PANTHER PTHR11496 1 372 7.4E-126 T 22-04-2016 RM25_RS04195 5eb5c8b083e91cd0a34c6f2fb2eede21 376 Gene3D G3DSA:1.20.1090.10 166 375 3.0E-63 T 22-04-2016 RM25_RS04195 5eb5c8b083e91cd0a34c6f2fb2eede21 376 PANTHER PTHR11496:SF71 1 372 7.4E-126 T 22-04-2016 RM25_RS04195 5eb5c8b083e91cd0a34c6f2fb2eede21 376 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 154 182 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RM25_RS04195 5eb5c8b083e91cd0a34c6f2fb2eede21 376 Gene3D G3DSA:3.40.50.1970 1 165 1.6E-42 T 22-04-2016 RM25_RS04195 5eb5c8b083e91cd0a34c6f2fb2eede21 376 SUPERFAMILY SSF56796 4 374 1.3E-102 T 22-04-2016 RM25_RS04195 5eb5c8b083e91cd0a34c6f2fb2eede21 376 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 367 1.3E-102 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 RM25_RS09060 8da870db07f7d90e155647430e680ab0 498 Gene3D G3DSA:3.40.605.10 10 267 5.5E-91 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RM25_RS09060 8da870db07f7d90e155647430e680ab0 498 Pfam PF00171 Aldehyde dehydrogenase family 19 481 1.0E-166 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RM25_RS09060 8da870db07f7d90e155647430e680ab0 498 PANTHER PTHR11699:SF97 1 492 1.9E-256 T 22-04-2016 RM25_RS09060 8da870db07f7d90e155647430e680ab0 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RM25_RS09060 8da870db07f7d90e155647430e680ab0 498 Gene3D G3DSA:3.40.309.10 268 456 3.7E-65 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RM25_RS09060 8da870db07f7d90e155647430e680ab0 498 SUPERFAMILY SSF53720 6 485 1.96E-163 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RM25_RS09060 8da870db07f7d90e155647430e680ab0 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RM25_RS09060 8da870db07f7d90e155647430e680ab0 498 PANTHER PTHR11699 1 492 1.9E-256 T 22-04-2016 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 Gene3D G3DSA:1.10.3370.10 5 437 7.1E-146 T 22-04-2016 IPR023201 SecY subunit domain RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 SUPERFAMILY SSF103491 3 427 4.97E-119 T 22-04-2016 IPR023201 SecY subunit domain RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 PANTHER PTHR10906:SF2 1 437 9.5E-184 T 22-04-2016 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 PANTHER PTHR10906 1 437 9.5E-184 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 Pfam PF00344 SecY translocase 76 420 1.5E-110 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 432 1.7E-128 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 ProSitePatterns PS00756 Protein secY signature 2. 176 193 - T 22-04-2016 IPR030659 SecY conserved site RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 436 28.096 T 22-04-2016 IPR026593 Protein translocase subunit SecY RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 1.1E-96 T 22-04-2016 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.1E-96 T 22-04-2016 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 1.1E-96 T 22-04-2016 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 157 182 1.1E-96 T 22-04-2016 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 183 206 1.1E-96 T 22-04-2016 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.1E-96 T 22-04-2016 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 1.1E-96 T 22-04-2016 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 1.1E-96 T 22-04-2016 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 405 423 1.1E-96 T 22-04-2016 RM25_RS02745 772a5d137988c7984bdaf0fb7cb69e57 437 PIRSF PIRSF004557 1 437 1.4E-114 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RM25_RS02395 ca1d6c13b07b7478cff8d072bc63bdbd 513 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 3.4E-32 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RM25_RS02395 ca1d6c13b07b7478cff8d072bc63bdbd 513 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 145 164 3.4E-32 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RM25_RS02395 ca1d6c13b07b7478cff8d072bc63bdbd 513 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 3.4E-32 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RM25_RS02395 ca1d6c13b07b7478cff8d072bc63bdbd 513 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 175 199 3.4E-32 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RM25_RS02395 ca1d6c13b07b7478cff8d072bc63bdbd 513 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 3.4E-32 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RM25_RS02395 ca1d6c13b07b7478cff8d072bc63bdbd 513 Pfam PF00361 Proton-conducting membrane transporter 139 431 1.5E-64 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RM25_RS02395 ca1d6c13b07b7478cff8d072bc63bdbd 513 PANTHER PTHR22773 1 99 3.6E-148 T 22-04-2016 RM25_RS02395 ca1d6c13b07b7478cff8d072bc63bdbd 513 PANTHER PTHR22773 116 501 3.6E-148 T 22-04-2016 RM25_RS02395 ca1d6c13b07b7478cff8d072bc63bdbd 513 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 499 5.6E-141 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 RM25_RS02395 ca1d6c13b07b7478cff8d072bc63bdbd 513 PANTHER PTHR22773:SF40 1 99 3.6E-148 T 22-04-2016 RM25_RS02395 ca1d6c13b07b7478cff8d072bc63bdbd 513 PANTHER PTHR22773:SF40 116 501 3.6E-148 T 22-04-2016 RM25_RS03620 d95cd15ba8477ac6ee996c50562e5e21 196 Gene3D G3DSA:3.40.50.150 25 169 2.4E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS03620 d95cd15ba8477ac6ee996c50562e5e21 196 PANTHER PTHR14741:SF34 17 149 2.2E-37 T 22-04-2016 RM25_RS03620 d95cd15ba8477ac6ee996c50562e5e21 196 PANTHER PTHR14741 17 149 2.2E-37 T 22-04-2016 RM25_RS03620 d95cd15ba8477ac6ee996c50562e5e21 196 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 27 147 5.8E-28 T 22-04-2016 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 RM25_RS03620 d95cd15ba8477ac6ee996c50562e5e21 196 Pfam PF13847 Methyltransferase domain 49 153 7.9E-8 T 22-04-2016 IPR025714 Methyltransferase domain RM25_RS03620 d95cd15ba8477ac6ee996c50562e5e21 196 SUPERFAMILY SSF53335 9 169 1.48E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07580 78018a34c8e97993fd8b41a87b696f9c 405 Gene3D G3DSA:3.40.50.2000 161 368 1.6E-44 T 22-04-2016 RM25_RS07580 78018a34c8e97993fd8b41a87b696f9c 405 Pfam PF13439 Glycosyltransferase Family 4 15 177 3.0E-25 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RM25_RS07580 78018a34c8e97993fd8b41a87b696f9c 405 PANTHER PTHR12526 1 391 6.0E-158 T 22-04-2016 RM25_RS07580 78018a34c8e97993fd8b41a87b696f9c 405 Pfam PF00534 Glycosyl transferases group 1 190 343 1.1E-24 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RM25_RS07580 78018a34c8e97993fd8b41a87b696f9c 405 SUPERFAMILY SSF53756 1 390 2.34E-74 T 22-04-2016 RM25_RS07580 78018a34c8e97993fd8b41a87b696f9c 405 PANTHER PTHR12526:SF355 1 391 6.0E-158 T 22-04-2016 RM25_RS07580 78018a34c8e97993fd8b41a87b696f9c 405 TIGRFAM TIGR02149 glgA_Coryne: glycogen synthase, Corynebacterium family 1 388 6.2E-159 T 22-04-2016 IPR011875 Glycogen synthase, corynebacterial KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00934 RM25_RS07800 f51bfb4897e780a98ff1ef88eebdc8a4 510 PANTHER PTHR11748:SF3 98 507 2.3E-88 T 22-04-2016 IPR025650 Alkyldihydroxyacetonephosphate synthase GO:0008609|GO:0008610 KEGG: 00565+2.5.1.26|UniPathway: UPA00781 RM25_RS07800 f51bfb4897e780a98ff1ef88eebdc8a4 510 Pfam PF02913 FAD linked oxidases, C-terminal domain 272 507 4.2E-32 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RM25_RS07800 f51bfb4897e780a98ff1ef88eebdc8a4 510 SUPERFAMILY SSF56176 57 272 1.26E-46 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RM25_RS07800 f51bfb4897e780a98ff1ef88eebdc8a4 510 Gene3D G3DSA:1.10.45.10 470 510 6.1E-9 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RM25_RS07800 f51bfb4897e780a98ff1ef88eebdc8a4 510 PANTHER PTHR11748 98 507 2.3E-88 T 22-04-2016 RM25_RS07800 f51bfb4897e780a98ff1ef88eebdc8a4 510 Gene3D G3DSA:3.30.43.10 51 150 1.0E-15 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RM25_RS07800 f51bfb4897e780a98ff1ef88eebdc8a4 510 SUPERFAMILY SSF55103 249 510 2.22E-28 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RM25_RS07800 f51bfb4897e780a98ff1ef88eebdc8a4 510 Pfam PF01565 FAD binding domain 97 236 7.2E-33 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RM25_RS07800 f51bfb4897e780a98ff1ef88eebdc8a4 510 Gene3D G3DSA:3.30.465.10 152 272 1.6E-26 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RM25_RS11665 ae8172ec8cc3348048458802f2cba7ce 327 SUPERFAMILY SSF56752 69 294 2.35E-24 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RM25_RS11665 ae8172ec8cc3348048458802f2cba7ce 327 Pfam PF01063 Amino-transferase class IV 156 294 3.0E-18 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RM25_RS11665 ae8172ec8cc3348048458802f2cba7ce 327 Gene3D G3DSA:3.20.10.10 201 295 9.7E-19 T 22-04-2016 RM25_RS10035 e72879196401bf6049aa4fb5aea5fba4 248 PANTHER PTHR30406 1 248 1.6E-86 T 22-04-2016 RM25_RS10035 e72879196401bf6049aa4fb5aea5fba4 248 SUPERFAMILY SSF161098 2 242 5.89E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10035 e72879196401bf6049aa4fb5aea5fba4 248 PANTHER PTHR30406:SF6 1 248 1.6E-86 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 RM25_RS10035 e72879196401bf6049aa4fb5aea5fba4 248 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 55 240 1.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10035 e72879196401bf6049aa4fb5aea5fba4 248 Gene3D G3DSA:1.10.3720.10 2 246 1.7E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS08110 99b85499ca82250bde1a1aa01a13a73c 223 PANTHER PTHR30522 11 222 5.6E-53 T 22-04-2016 RM25_RS08110 99b85499ca82250bde1a1aa01a13a73c 223 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 42 114 3.7E-23 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RM25_RS08110 99b85499ca82250bde1a1aa01a13a73c 223 Gene3D G3DSA:1.10.287.1080 31 87 4.3E-8 T 22-04-2016 RM25_RS08110 99b85499ca82250bde1a1aa01a13a73c 223 SUPERFAMILY SSF101386 22 119 5.98E-20 T 22-04-2016 RM25_RS08110 99b85499ca82250bde1a1aa01a13a73c 223 PANTHER PTHR30522:SF0 11 222 5.6E-53 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG RM25_RS07675 12eb09440a368c678309c0414845612b 168 PANTHER PTHR22573 24 158 3.9E-20 T 22-04-2016 RM25_RS07675 12eb09440a368c678309c0414845612b 168 Gene3D G3DSA:3.40.50.2020 13 162 4.0E-35 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS07675 12eb09440a368c678309c0414845612b 168 SUPERFAMILY SSF53271 10 159 4.46E-29 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS07675 12eb09440a368c678309c0414845612b 168 Pfam PF00156 Phosphoribosyl transferase domain 15 159 7.6E-25 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RM25_RS07675 12eb09440a368c678309c0414845612b 168 PANTHER PTHR22573:SF51 24 158 3.9E-20 T 22-04-2016 RM25_RS07525 fdbfac65ad830a17d5638f350d4cb3e3 247 PANTHER PTHR39082 4 247 1.6E-22 T 22-04-2016 RM25_RS07525 fdbfac65ad830a17d5638f350d4cb3e3 247 Pfam PF02591 C4-type zinc ribbon domain 205 239 2.4E-11 T 22-04-2016 IPR003743 C4-type zinc ribbon domain RM25_RS11265 e6b54d04e923f342700b581173344ba3 294 PANTHER PTHR30514 33 279 4.6E-44 T 22-04-2016 RM25_RS11265 e6b54d04e923f342700b581173344ba3 294 Pfam PF01418 Helix-turn-helix domain, rpiR family 23 88 9.7E-14 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RM25_RS11265 e6b54d04e923f342700b581173344ba3 294 Gene3D G3DSA:3.40.50.10490 118 277 3.6E-29 T 22-04-2016 RM25_RS11265 e6b54d04e923f342700b581173344ba3 294 Gene3D G3DSA:1.10.10.10 20 89 3.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS11265 e6b54d04e923f342700b581173344ba3 294 PANTHER PTHR30514:SF1 33 279 4.6E-44 T 22-04-2016 RM25_RS11265 e6b54d04e923f342700b581173344ba3 294 Pfam PF01380 SIS domain 142 270 1.9E-15 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RM25_RS11265 e6b54d04e923f342700b581173344ba3 294 SUPERFAMILY SSF53697 108 281 1.98E-28 T 22-04-2016 RM25_RS11265 e6b54d04e923f342700b581173344ba3 294 SUPERFAMILY SSF46689 22 89 1.49E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS03565 6ec5de3ae33348068b0e8f9e4b020f1a 177 Pfam PF00186 Dihydrofolate reductase 2 158 7.8E-40 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RM25_RS03565 6ec5de3ae33348068b0e8f9e4b020f1a 177 PRINTS PR00070 Dihydrofolate reductase signature 39 50 1.2E-9 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RM25_RS03565 6ec5de3ae33348068b0e8f9e4b020f1a 177 PRINTS PR00070 Dihydrofolate reductase signature 12 22 1.2E-9 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RM25_RS03565 6ec5de3ae33348068b0e8f9e4b020f1a 177 PRINTS PR00070 Dihydrofolate reductase signature 26 34 1.2E-9 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RM25_RS03565 6ec5de3ae33348068b0e8f9e4b020f1a 177 PRINTS PR00070 Dihydrofolate reductase signature 98 112 1.2E-9 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RM25_RS03565 6ec5de3ae33348068b0e8f9e4b020f1a 177 PANTHER PTHR22778 1 149 3.9E-18 T 22-04-2016 RM25_RS03565 6ec5de3ae33348068b0e8f9e4b020f1a 177 SUPERFAMILY SSF53597 2 160 2.27E-38 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RM25_RS03565 6ec5de3ae33348068b0e8f9e4b020f1a 177 Gene3D G3DSA:3.40.430.10 3 161 5.3E-38 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RM25_RS03565 6ec5de3ae33348068b0e8f9e4b020f1a 177 PANTHER PTHR22778:SF16 1 149 3.9E-18 T 22-04-2016 RM25_RS02480 f630a3a36dad791bf4f4cfe250b7b1c0 56 PANTHER PTHR15238:SF3 1 55 3.8E-24 T 22-04-2016 RM25_RS02480 f630a3a36dad791bf4f4cfe250b7b1c0 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 24 43 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02480 f630a3a36dad791bf4f4cfe250b7b1c0 56 Pfam PF00471 Ribosomal protein L33 11 56 4.7E-24 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02480 f630a3a36dad791bf4f4cfe250b7b1c0 56 PANTHER PTHR15238 1 55 3.8E-24 T 22-04-2016 RM25_RS02480 f630a3a36dad791bf4f4cfe250b7b1c0 56 SUPERFAMILY SSF57829 5 56 4.09E-20 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RM25_RS02480 f630a3a36dad791bf4f4cfe250b7b1c0 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 8 56 19.275 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02480 f630a3a36dad791bf4f4cfe250b7b1c0 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.8E-23 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS05195 8dfb26f03a1c85b5c96630ef35dae704 443 Gene3D G3DSA:3.90.70.10 55 443 2.2E-157 T 22-04-2016 RM25_RS05195 8dfb26f03a1c85b5c96630ef35dae704 443 PANTHER PTHR10363 9 443 1.5E-186 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 RM25_RS05195 8dfb26f03a1c85b5c96630ef35dae704 443 SUPERFAMILY SSF54001 7 442 2.95E-110 T 22-04-2016 RM25_RS05195 8dfb26f03a1c85b5c96630ef35dae704 443 PIRSF PIRSF005700 4 443 6.8E-151 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 RM25_RS05195 8dfb26f03a1c85b5c96630ef35dae704 443 Pfam PF03051 Peptidase C1-like family 9 440 1.0E-155 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 RM25_RS05195 8dfb26f03a1c85b5c96630ef35dae704 443 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 67 78 - T 22-04-2016 IPR000169 Cysteine peptidase, cysteine active site RM25_RS08790 87a8a91fa99d84cb724464bb375afcf4 248 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 122 129 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS08790 87a8a91fa99d84cb724464bb375afcf4 248 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 24 243 7.3E-56 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS08790 87a8a91fa99d84cb724464bb375afcf4 248 PANTHER PTHR32125:SF4 22 244 1.7E-45 T 22-04-2016 RM25_RS08790 87a8a91fa99d84cb724464bb375afcf4 248 SUPERFAMILY SSF53448 22 244 3.15E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS08790 87a8a91fa99d84cb724464bb375afcf4 248 Gene3D G3DSA:3.90.550.10 19 244 1.1E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS08790 87a8a91fa99d84cb724464bb375afcf4 248 PANTHER PTHR32125 22 244 1.7E-45 T 22-04-2016 RM25_RS08790 87a8a91fa99d84cb724464bb375afcf4 248 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 21 246 26.688 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS08790 87a8a91fa99d84cb724464bb375afcf4 248 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 22 244 2.7E-53 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RM25_RS06300 016c006cc5793bdfe11404ad517e2d69 343 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 2 329 43.948 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS06300 016c006cc5793bdfe11404ad517e2d69 343 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 1.3E-63 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS06300 016c006cc5793bdfe11404ad517e2d69 343 Gene3D G3DSA:1.10.1040.10 43 325 6.8E-109 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RM25_RS06300 016c006cc5793bdfe11404ad517e2d69 343 PANTHER PTHR21371 1 338 8.8E-172 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS06300 016c006cc5793bdfe11404ad517e2d69 343 SUPERFAMILY SSF48179 184 329 1.05E-65 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RM25_RS06300 016c006cc5793bdfe11404ad517e2d69 343 Gene3D G3DSA:3.50.50.60 3 42 5.8E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06300 016c006cc5793bdfe11404ad517e2d69 343 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 178 4.8E-74 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS06300 016c006cc5793bdfe11404ad517e2d69 343 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 3.6E-125 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS06300 016c006cc5793bdfe11404ad517e2d69 343 SUPERFAMILY SSF51735 3 183 1.34E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07330 e226794d681f60aa7c5956c8be3495d1 358 PANTHER PTHR12001 28 115 1.4E-82 T 22-04-2016 IPR017446 Polyprenyl synthetase-related RM25_RS07330 e226794d681f60aa7c5956c8be3495d1 358 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 96 110 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RM25_RS07330 e226794d681f60aa7c5956c8be3495d1 358 Gene3D G3DSA:1.10.600.10 23 357 1.5E-72 T 22-04-2016 IPR008949 Isoprenoid synthase domain RM25_RS07330 e226794d681f60aa7c5956c8be3495d1 358 Pfam PF00348 Polyprenyl synthetase 52 295 1.9E-45 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RM25_RS07330 e226794d681f60aa7c5956c8be3495d1 358 SUPERFAMILY SSF48576 28 357 1.42E-65 T 22-04-2016 IPR008949 Isoprenoid synthase domain RM25_RS07330 e226794d681f60aa7c5956c8be3495d1 358 PANTHER PTHR12001:SF45 28 115 1.4E-82 T 22-04-2016 RM25_RS07330 e226794d681f60aa7c5956c8be3495d1 358 PANTHER PTHR12001:SF45 132 358 1.4E-82 T 22-04-2016 RM25_RS07330 e226794d681f60aa7c5956c8be3495d1 358 PANTHER PTHR12001 132 358 1.4E-82 T 22-04-2016 IPR017446 Polyprenyl synthetase-related RM25_RS00955 c2100e607ba60b1afa0ddbdcc12d5910 206 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 30 96 4.1E-9 T 22-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin RM25_RS08520 ba9d3125b919390703c2cf00dbf83689 457 Pfam PF01704 UTP--glucose-1-phosphate uridylyltransferase 37 435 2.2E-113 T 22-04-2016 IPR002618 UDPGP family GO:0008152|GO:0070569 RM25_RS08520 ba9d3125b919390703c2cf00dbf83689 457 Gene3D G3DSA:3.90.550.10 7 386 8.7E-76 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS08520 ba9d3125b919390703c2cf00dbf83689 457 PIRSF PIRSF000806 1 457 3.8E-127 T 22-04-2016 IPR016267 UTP--glucose-1-phosphate uridylyltransferase GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 RM25_RS08520 ba9d3125b919390703c2cf00dbf83689 457 PANTHER PTHR11952 36 439 2.1E-98 T 22-04-2016 IPR002618 UDPGP family GO:0008152|GO:0070569 RM25_RS08520 ba9d3125b919390703c2cf00dbf83689 457 SUPERFAMILY SSF53448 63 439 5.06E-73 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS10775 52d5f5f07cf8609e24b484efcf7a5cba 451 PANTHER PTHR33498:SF1 46 434 8.5E-26 T 22-04-2016 RM25_RS10775 52d5f5f07cf8609e24b484efcf7a5cba 451 Pfam PF01610 Transposase 164 419 6.1E-64 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS10775 52d5f5f07cf8609e24b484efcf7a5cba 451 PANTHER PTHR33498 46 434 8.5E-26 T 22-04-2016 RM25_RS10775 52d5f5f07cf8609e24b484efcf7a5cba 451 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 46 88 3.2E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS12105 af8500f926631f69ac501f5987fabdc0 296 Pfam PF05977 Transmembrane secretion effector 3 281 6.2E-59 T 22-04-2016 IPR010290 Transmembrane secretion effector RM25_RS12105 af8500f926631f69ac501f5987fabdc0 296 Gene3D G3DSA:1.20.1250.20 2 157 3.3E-12 T 22-04-2016 RM25_RS12105 af8500f926631f69ac501f5987fabdc0 296 SUPERFAMILY SSF103473 3 158 1.22E-14 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS12105 af8500f926631f69ac501f5987fabdc0 296 PANTHER PTHR23513 1 185 4.2E-28 T 22-04-2016 RM25_RS12105 af8500f926631f69ac501f5987fabdc0 296 PANTHER PTHR23513:SF7 1 185 4.2E-28 T 22-04-2016 RM25_RS10890 2fd4b7b8dcfb2c4de2fb8eb3688a51fd 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 1.6E-8 T 22-04-2016 RM25_RS10890 2fd4b7b8dcfb2c4de2fb8eb3688a51fd 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 261 286 1.6E-8 T 22-04-2016 RM25_RS10890 2fd4b7b8dcfb2c4de2fb8eb3688a51fd 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 1.6E-8 T 22-04-2016 RM25_RS10890 2fd4b7b8dcfb2c4de2fb8eb3688a51fd 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 296 320 1.6E-8 T 22-04-2016 RM25_RS10890 2fd4b7b8dcfb2c4de2fb8eb3688a51fd 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 1.6E-8 T 22-04-2016 RM25_RS10890 2fd4b7b8dcfb2c4de2fb8eb3688a51fd 450 PANTHER PTHR23501 1 447 1.7E-76 T 22-04-2016 RM25_RS10890 2fd4b7b8dcfb2c4de2fb8eb3688a51fd 450 Gene3D G3DSA:1.20.1250.20 261 440 1.3E-13 T 22-04-2016 RM25_RS10890 2fd4b7b8dcfb2c4de2fb8eb3688a51fd 450 Gene3D G3DSA:1.20.1250.20 14 189 2.8E-22 T 22-04-2016 RM25_RS10890 2fd4b7b8dcfb2c4de2fb8eb3688a51fd 450 SUPERFAMILY SSF103473 12 200 1.28E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS10890 2fd4b7b8dcfb2c4de2fb8eb3688a51fd 450 SUPERFAMILY SSF103473 243 442 1.28E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS10890 2fd4b7b8dcfb2c4de2fb8eb3688a51fd 450 Pfam PF07690 Major Facilitator Superfamily 16 403 2.4E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS00685 aadf080f73ade1e57bbd200962a581e5 598 Pfam PF00425 chorismate binding enzyme 277 537 7.6E-89 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RM25_RS00685 aadf080f73ade1e57bbd200962a581e5 598 SUPERFAMILY SSF56322 47 545 1.96E-123 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RM25_RS00685 aadf080f73ade1e57bbd200962a581e5 598 PRINTS PR00095 Anthranilate synthase component I signature 385 398 3.1E-14 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RM25_RS00685 aadf080f73ade1e57bbd200962a581e5 598 PRINTS PR00095 Anthranilate synthase component I signature 494 508 3.1E-14 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RM25_RS00685 aadf080f73ade1e57bbd200962a581e5 598 PRINTS PR00095 Anthranilate synthase component I signature 399 412 3.1E-14 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RM25_RS00685 aadf080f73ade1e57bbd200962a581e5 598 PRINTS PR00095 Anthranilate synthase component I signature 479 493 3.1E-14 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RM25_RS00685 aadf080f73ade1e57bbd200962a581e5 598 PANTHER PTHR11236 48 76 1.8E-164 T 22-04-2016 RM25_RS00685 aadf080f73ade1e57bbd200962a581e5 598 PANTHER PTHR11236 98 547 1.8E-164 T 22-04-2016 RM25_RS00685 aadf080f73ade1e57bbd200962a581e5 598 Pfam PF04715 Anthranilate synthase component I, N terminal region 51 214 5.7E-11 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RM25_RS00685 aadf080f73ade1e57bbd200962a581e5 598 Gene3D G3DSA:3.60.120.10 47 546 2.3E-144 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RM25_RS00685 aadf080f73ade1e57bbd200962a581e5 598 PANTHER PTHR11236:SF18 48 76 1.8E-164 T 22-04-2016 RM25_RS00685 aadf080f73ade1e57bbd200962a581e5 598 PANTHER PTHR11236:SF18 98 547 1.8E-164 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 Pfam PF00702 haloacid dehalogenase-like hydrolase 322 528 8.2E-36 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 SUPERFAMILY SSF81653 137 233 1.44E-21 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 107 347 2.2E-27 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 430 593 5.5E-33 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 Gene3D G3DSA:3.40.50.1000 301 340 3.3E-44 T 22-04-2016 IPR023214 HAD-like domain RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 Gene3D G3DSA:3.40.50.1000 443 579 3.3E-44 T 22-04-2016 IPR023214 HAD-like domain RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 PANTHER PTHR24093 57 597 1.2E-146 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 Gene3D G3DSA:3.40.1110.10 341 442 8.5E-15 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 SUPERFAMILY SSF56784 383 614 1.92E-51 T 22-04-2016 IPR023214 HAD-like domain RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 SUPERFAMILY SSF56784 324 344 1.92E-51 T 22-04-2016 IPR023214 HAD-like domain RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 86 618 1.7E-130 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 Pfam PF00122 E1-E2 ATPase 106 317 2.3E-51 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 68 617 2.4E-119 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 Gene3D G3DSA:2.70.150.10 129 234 5.9E-22 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 PANTHER PTHR24093:SF317 57 597 1.2E-146 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 84 617 2.3E-162 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 328 334 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 515 534 6.0E-29 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 440 451 6.0E-29 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 184 198 6.0E-29 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 326 340 6.0E-29 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 550 6.0E-29 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 472 6.0E-29 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 SUPERFAMILY SSF81665 235 320 1.7E-10 T 22-04-2016 RM25_RS02225 394d99209c9a90d73c0bb19a52c1b273 623 SUPERFAMILY SSF81665 86 138 1.7E-10 T 22-04-2016 RM25_RS04385 48f7a52567be754fbcebf1cc14a46546 165 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 150 72.04 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RM25_RS04385 48f7a52567be754fbcebf1cc14a46546 165 PANTHER PTHR30455 2 153 3.7E-58 T 22-04-2016 RM25_RS04385 48f7a52567be754fbcebf1cc14a46546 165 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 143 4.0E-48 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RM25_RS04385 48f7a52567be754fbcebf1cc14a46546 165 Pfam PF03477 ATP cone domain 47 131 1.5E-11 T 22-04-2016 IPR005144 ATP-cone domain RM25_RS04385 48f7a52567be754fbcebf1cc14a46546 165 PANTHER PTHR30455:SF2 2 153 3.7E-58 T 22-04-2016 RM25_RS09005 2c0781a025100680b01317f15bbe597f 224 PANTHER PTHR30353 9 223 6.3E-57 T 22-04-2016 IPR032818 DedA family RM25_RS09005 2c0781a025100680b01317f15bbe597f 224 PANTHER PTHR30353:SF0 9 223 6.3E-57 T 22-04-2016 RM25_RS09005 2c0781a025100680b01317f15bbe597f 224 Pfam PF09335 SNARE associated Golgi protein 37 176 7.7E-17 T 22-04-2016 IPR032816 SNARE associated Golgi protein RM25_RS01020 71cd1a2136956a0300c2a2a06b5babec 324 SUPERFAMILY SSF52922 190 323 1.31E-36 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS01020 71cd1a2136956a0300c2a2a06b5babec 324 SMART SM00861 4 179 3.4E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RM25_RS01020 71cd1a2136956a0300c2a2a06b5babec 324 Gene3D G3DSA:3.40.50.970 2 186 5.9E-71 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS01020 71cd1a2136956a0300c2a2a06b5babec 324 SUPERFAMILY SSF52518 4 183 3.24E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS01020 71cd1a2136956a0300c2a2a06b5babec 324 Gene3D G3DSA:3.40.50.920 196 319 2.9E-39 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS01020 71cd1a2136956a0300c2a2a06b5babec 324 PANTHER PTHR11624:SF79 4 324 7.9E-164 T 22-04-2016 RM25_RS01020 71cd1a2136956a0300c2a2a06b5babec 324 PANTHER PTHR11624 4 324 7.9E-164 T 22-04-2016 IPR033247 Transketolase family RM25_RS01020 71cd1a2136956a0300c2a2a06b5babec 324 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 2.4E-43 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RM25_RS01020 71cd1a2136956a0300c2a2a06b5babec 324 Pfam PF02780 Transketolase, C-terminal domain 195 314 2.2E-34 T 22-04-2016 IPR033248 Transketolase, C-terminal domain RM25_RS10920 cbd687e3a9a2504f25571612f0ad9252 344 Pfam PF13377 Periplasmic binding protein-like domain 172 329 2.0E-21 T 22-04-2016 RM25_RS10920 cbd687e3a9a2504f25571612f0ad9252 344 Gene3D G3DSA:3.40.50.2300 176 311 3.0E-23 T 22-04-2016 RM25_RS10920 cbd687e3a9a2504f25571612f0ad9252 344 SUPERFAMILY SSF53822 64 323 5.35E-45 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RM25_RS10920 cbd687e3a9a2504f25571612f0ad9252 344 PANTHER PTHR30146 6 337 1.7E-71 T 22-04-2016 RM25_RS10920 cbd687e3a9a2504f25571612f0ad9252 344 Gene3D G3DSA:3.40.50.2300 59 175 1.1E-30 T 22-04-2016 RM25_RS10920 cbd687e3a9a2504f25571612f0ad9252 344 SMART SM00354 6 76 2.0E-22 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RM25_RS10920 cbd687e3a9a2504f25571612f0ad9252 344 Gene3D G3DSA:1.10.260.40 7 58 1.7E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS10920 cbd687e3a9a2504f25571612f0ad9252 344 SUPERFAMILY SSF47413 6 64 3.26E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS10920 cbd687e3a9a2504f25571612f0ad9252 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 53 3.4E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 PANTHER PTHR26402 6 212 8.9E-71 T 22-04-2016 RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 Gene3D G3DSA:3.40.50.2300 6 155 7.4E-23 T 22-04-2016 RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 Gene3D G3DSA:1.10.10.10 156 217 1.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 9.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 9.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 9.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 SUPERFAMILY SSF52172 6 137 1.24E-17 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 Pfam PF00072 Response regulator receiver domain 8 113 1.3E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 199 1.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 PANTHER PTHR26402:SF582 6 212 8.9E-71 T 22-04-2016 RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 SUPERFAMILY SSF46894 146 200 5.44E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 SMART SM00421 151 208 4.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS00185 0b13604b4ad480bd2cc24c0fea0071c6 218 SMART SM00448 6 125 5.0E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS12110 8d290e5dda9cbd4d01102fe5ce3cf8ba 235 PANTHER PTHR23513:SF7 1 225 1.3E-56 T 22-04-2016 RM25_RS12110 8d290e5dda9cbd4d01102fe5ce3cf8ba 235 PANTHER PTHR23513 1 225 1.3E-56 T 22-04-2016 RM25_RS12110 8d290e5dda9cbd4d01102fe5ce3cf8ba 235 Gene3D G3DSA:1.20.1250.20 2 183 7.7E-20 T 22-04-2016 RM25_RS12110 8d290e5dda9cbd4d01102fe5ce3cf8ba 235 Pfam PF05977 Transmembrane secretion effector 2 225 4.4E-65 T 22-04-2016 IPR010290 Transmembrane secretion effector RM25_RS12110 8d290e5dda9cbd4d01102fe5ce3cf8ba 235 SUPERFAMILY SSF103473 2 221 3.66E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS07340 fd0d82caccf110689e1809f674bbd1cd 283 SUPERFAMILY SSF103481 28 125 1.96E-8 T 22-04-2016 RM25_RS07340 fd0d82caccf110689e1809f674bbd1cd 283 PANTHER PTHR12715 2 268 4.2E-41 T 22-04-2016 RM25_RS07340 fd0d82caccf110689e1809f674bbd1cd 283 Pfam PF00892 EamA-like transporter family 133 266 2.2E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RM25_RS07340 fd0d82caccf110689e1809f674bbd1cd 283 Pfam PF00892 EamA-like transporter family 2 121 9.3E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RM25_RS07340 fd0d82caccf110689e1809f674bbd1cd 283 SUPERFAMILY SSF103481 189 269 1.06E-11 T 22-04-2016 RM25_RS02800 6eb441e8f544f26040ed2654094b4edd 381 SUPERFAMILY SSF53756 3 376 2.75E-62 T 22-04-2016 RM25_RS02800 6eb441e8f544f26040ed2654094b4edd 381 Gene3D G3DSA:3.40.50.2000 166 354 5.7E-20 T 22-04-2016 RM25_RS02800 6eb441e8f544f26040ed2654094b4edd 381 Pfam PF13439 Glycosyltransferase Family 4 15 177 4.7E-16 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RM25_RS02800 6eb441e8f544f26040ed2654094b4edd 381 Pfam PF00534 Glycosyl transferases group 1 195 340 5.5E-22 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RM25_RS02800 6eb441e8f544f26040ed2654094b4edd 381 PANTHER PTHR12526 1 380 6.4E-49 T 22-04-2016 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 204 447 1.4E-85 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 PANTHER PTHR11606 14 449 4.7E-242 T 22-04-2016 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 Gene3D G3DSA:3.40.192.10 69 189 5.2E-62 T 22-04-2016 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 373 384 7.1E-30 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 237 257 7.1E-30 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 195 217 7.1E-30 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 7.1E-30 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 Gene3D G3DSA:1.10.285.10 13 68 1.3E-18 T 22-04-2016 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 Gene3D G3DSA:1.10.285.10 374 448 2.5E-21 T 22-04-2016 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 Gene3D G3DSA:3.40.50.720 211 373 2.9E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 PANTHER PTHR11606:SF4 14 449 4.7E-242 T 22-04-2016 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 SUPERFAMILY SSF51735 204 448 3.38E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 PIRSF PIRSF000185 39 449 7.9E-116 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 185 4.0E-50 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 SUPERFAMILY SSF53223 9 198 8.64E-71 T 22-04-2016 RM25_RS08240 7397efd5ce6370918470f285b62573f7 449 SMART SM00839 206 447 1.3E-88 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 Gene3D G3DSA:3.30.9.10 213 312 1.3E-9 T 22-04-2016 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 11 28 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 350 360 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 Pfam PF04324 BFD-like [2Fe-2S] binding domain 411 462 3.5E-7 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 SUPERFAMILY SSF51905 328 383 1.07E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 SUPERFAMILY SSF51905 6 223 1.07E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 Pfam PF01266 FAD dependent oxidoreductase 7 355 4.3E-44 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 PANTHER PTHR11985:SF14 1 517 1.2E-182 T 22-04-2016 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 307 313 7.4E-21 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 29 7.4E-21 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 47 7.4E-21 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 345 357 7.4E-21 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 6 18 7.4E-21 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 SUPERFAMILY SSF54373 224 314 2.22E-9 T 22-04-2016 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 PANTHER PTHR11985 1 517 1.2E-182 T 22-04-2016 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 Gene3D G3DSA:3.50.50.60 135 212 4.5E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 Gene3D G3DSA:3.50.50.60 429 480 4.5E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 Gene3D G3DSA:3.50.50.60 3 97 4.5E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS04400 baa5f3a628a8c3a41a351e3319c9e6ee 542 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 7 517 2.5E-204 T 22-04-2016 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 143 2.2E-36 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 227 254 8.6E-34 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 50 79 8.6E-34 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 15 8.6E-34 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 103 128 8.6E-34 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 151 179 8.6E-34 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 SUPERFAMILY SSF48179 160 294 3.2E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 PANTHER PTHR11811 2 294 7.8E-139 T 22-04-2016 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 162 272 1.0E-20 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 PANTHER PTHR11811:SF28 2 294 7.8E-139 T 22-04-2016 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 SMART SM01350 162 296 0.0068 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 2 294 1.2E-97 T 22-04-2016 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 SUPERFAMILY SSF51735 2 143 1.91E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 Gene3D G3DSA:1.10.1040.10 164 272 9.8E-30 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RM25_RS02090 62d4051b0d7e4fcb08844169518fbd1e 296 Gene3D G3DSA:3.40.50.720 2 163 6.2E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 SUPERFAMILY SSF46785 65 131 2.58E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 Pfam PF01726 LexA DNA binding domain 64 127 2.0E-25 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 235 247 2.6E-10 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 196 206 2.6E-10 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 207 218 2.6E-10 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 PANTHER PTHR33516 63 280 2.7E-82 T 22-04-2016 RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 Gene3D G3DSA:1.10.10.10 65 130 2.1E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 PANTHER PTHR33516:SF2 63 280 2.7E-82 T 22-04-2016 RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 Pfam PF00717 Peptidase S24-like 199 263 8.2E-16 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 TIGRFAM TIGR00498 lexA: repressor LexA 64 279 2.0E-69 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 Hamap MF_00015 LexA repressor [lexA]. 65 280 32.619 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 SUPERFAMILY SSF51306 160 278 7.67E-34 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RM25_RS04375 8a221d37a55893b5c47f115ad7e361bc 280 Gene3D G3DSA:2.10.109.10 160 280 3.5E-43 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RM25_RS01950 a7ea48786a8f92a9a91b656a723045e8 382 PIRSF PIRSF016578 2 378 3.3E-33 T 22-04-2016 RM25_RS01950 a7ea48786a8f92a9a91b656a723045e8 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 354 1.3E-12 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RM25_RS01950 a7ea48786a8f92a9a91b656a723045e8 382 SUPERFAMILY SSF47203 226 377 3.06E-21 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RM25_RS01950 a7ea48786a8f92a9a91b656a723045e8 382 Gene3D G3DSA:1.10.540.10 7 88 7.6E-16 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RM25_RS01950 a7ea48786a8f92a9a91b656a723045e8 382 Gene3D G3DSA:2.40.110.10 128 207 3.6E-16 T 22-04-2016 RM25_RS01950 a7ea48786a8f92a9a91b656a723045e8 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 106 2.5E-8 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RM25_RS01950 a7ea48786a8f92a9a91b656a723045e8 382 SUPERFAMILY SSF56645 9 214 6.15E-36 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RM25_RS01950 a7ea48786a8f92a9a91b656a723045e8 382 PANTHER PTHR10909 4 357 4.8E-27 T 22-04-2016 RM25_RS01950 a7ea48786a8f92a9a91b656a723045e8 382 Gene3D G3DSA:1.20.140.10 208 377 5.0E-26 T 22-04-2016 RM25_RS10855 730f25dedfcf1e830586465754cfdfdb 333 PANTHER PTHR30024 46 292 4.7E-26 T 22-04-2016 RM25_RS10855 730f25dedfcf1e830586465754cfdfdb 333 SUPERFAMILY SSF53850 49 276 1.12E-36 T 22-04-2016 RM25_RS10855 730f25dedfcf1e830586465754cfdfdb 333 Gene3D G3DSA:3.40.190.10 149 224 1.8E-15 T 22-04-2016 RM25_RS10855 730f25dedfcf1e830586465754cfdfdb 333 Gene3D G3DSA:3.40.190.10 74 148 8.5E-4 T 22-04-2016 RM25_RS10855 730f25dedfcf1e830586465754cfdfdb 333 Pfam PF09084 NMT1/THI5 like 64 272 1.4E-22 T 22-04-2016 IPR015168 SsuA/THI5-like RM25_RS10855 730f25dedfcf1e830586465754cfdfdb 333 SMART SM00062 49 274 0.0019 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Gene3D G3DSA:2.40.270.10 882 1042 1.3E-75 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Gene3D G3DSA:2.40.270.10 715 742 1.3E-75 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 SUPERFAMILY SSF64484 43 1149 0.0 T 22-04-2016 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Pfam PF04560 RNA polymerase Rpb2, domain 7 1066 1139 2.3E-26 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Pfam PF00562 RNA polymerase Rpb2, domain 6 647 1064 2.8E-157 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Pfam PF04561 RNA polymerase Rpb2, domain 2 190 382 1.7E-29 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Pfam PF10385 RNA polymerase beta subunit external 1 domain 519 585 8.5E-25 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Gene3D G3DSA:2.40.50.150 750 881 6.7E-59 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Gene3D G3DSA:3.90.1110.10 192 364 3.7E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 PANTHER PTHR20856 974 1146 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 PANTHER PTHR20856 671 950 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 PANTHER PTHR20856 92 654 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 PANTHER PTHR20856 16 69 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Gene3D G3DSA:3.90.1100.10 588 640 3.1E-144 T 22-04-2016 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Gene3D G3DSA:3.90.1100.10 371 519 3.1E-144 T 22-04-2016 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Gene3D G3DSA:3.90.1100.10 51 190 3.1E-144 T 22-04-2016 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 257 859 7.5E-295 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 PANTHER PTHR20856:SF20 974 1146 0.0 T 22-04-2016 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 PANTHER PTHR20856:SF20 671 950 0.0 T 22-04-2016 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 PANTHER PTHR20856:SF20 92 654 0.0 T 22-04-2016 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 PANTHER PTHR20856:SF20 16 69 0.0 T 22-04-2016 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 ProSitePatterns PS01166 RNA polymerases beta chain signature. 885 897 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Gene3D G3DSA:2.40.50.100 645 714 5.0E-23 T 22-04-2016 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Pfam PF04563 RNA polymerase beta subunit 57 428 4.8E-23 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 43 1142 12.228 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Gene3D G3DSA:2.30.150.10 520 585 3.4E-26 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RM25_RS02555 b18360344b4c6e6251bc87bd7f3a7672 1181 Pfam PF04565 RNA polymerase Rpb2, domain 3 441 509 4.5E-29 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RM25_RS00755 5c6c4fe1a7a82b4db94886df234b8840 508 PANTHER PTHR33392 143 392 3.0E-52 T 22-04-2016 RM25_RS00755 5c6c4fe1a7a82b4db94886df234b8840 508 PANTHER PTHR33392 31 124 3.0E-52 T 22-04-2016 RM25_RS00755 5c6c4fe1a7a82b4db94886df234b8840 508 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 76 254 8.8E-26 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain RM25_RS00755 5c6c4fe1a7a82b4db94886df234b8840 508 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 363 446 1.0E-10 T 22-04-2016 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain RM25_RS00755 5c6c4fe1a7a82b4db94886df234b8840 508 PANTHER PTHR33392:SF1 143 392 3.0E-52 T 22-04-2016 RM25_RS00755 5c6c4fe1a7a82b4db94886df234b8840 508 PANTHER PTHR33392:SF1 31 124 3.0E-52 T 22-04-2016 RM25_RS00755 5c6c4fe1a7a82b4db94886df234b8840 508 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 76 254 6.4E-33 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain RM25_RS04230 9b5cb5cb62c24bc22e0779acb723ab65 281 PANTHER PTHR11820 50 267 9.2E-96 T 22-04-2016 RM25_RS04230 9b5cb5cb62c24bc22e0779acb723ab65 281 Gene3D G3DSA:3.90.850.10 57 266 5.0E-84 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RM25_RS04230 9b5cb5cb62c24bc22e0779acb723ab65 281 Pfam PF10370 Domain of unknown function (DUF2437) 1 60 4.4E-17 T 22-04-2016 IPR018833 Domain of unknown function DUF2437 RM25_RS04230 9b5cb5cb62c24bc22e0779acb723ab65 281 SUPERFAMILY SSF56529 58 268 4.84E-75 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RM25_RS04230 9b5cb5cb62c24bc22e0779acb723ab65 281 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 66 263 6.9E-62 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RM25_RS02600 ce80706e7ca948f479f30602425242b1 290 SUPERFAMILY SSF56752 11 276 9.42E-45 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RM25_RS02600 ce80706e7ca948f479f30602425242b1 290 Gene3D G3DSA:3.20.10.10 129 279 5.8E-23 T 22-04-2016 RM25_RS02600 ce80706e7ca948f479f30602425242b1 290 Gene3D G3DSA:3.30.470.10 11 105 4.7E-18 T 22-04-2016 RM25_RS02600 ce80706e7ca948f479f30602425242b1 290 PANTHER PTHR11825 10 282 5.5E-39 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RM25_RS02600 ce80706e7ca948f479f30602425242b1 290 Pfam PF01063 Amino-transferase class IV 30 260 1.1E-31 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RM25_RS02600 ce80706e7ca948f479f30602425242b1 290 PANTHER PTHR11825:SF32 10 282 5.5E-39 T 22-04-2016 RM25_RS03030 373b2bec92b67e790b95ba155d9e29fe 183 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RM25_RS03030 373b2bec92b67e790b95ba155d9e29fe 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 126 159 2.6E-9 T 22-04-2016 IPR001451 Hexapeptide repeat RM25_RS03030 373b2bec92b67e790b95ba155d9e29fe 183 PANTHER PTHR23416 5 176 7.7E-83 T 22-04-2016 RM25_RS03030 373b2bec92b67e790b95ba155d9e29fe 183 PIRSF PIRSF000441 6 180 2.8E-74 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 RM25_RS03030 373b2bec92b67e790b95ba155d9e29fe 183 PANTHER PTHR23416:SF55 5 176 7.7E-83 T 22-04-2016 RM25_RS03030 373b2bec92b67e790b95ba155d9e29fe 183 Gene3D G3DSA:1.10.3130.10 6 70 6.5E-23 T 22-04-2016 RM25_RS03030 373b2bec92b67e790b95ba155d9e29fe 183 Gene3D G3DSA:2.160.10.10 71 176 3.8E-33 T 22-04-2016 RM25_RS03030 373b2bec92b67e790b95ba155d9e29fe 183 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 13 174 9.4E-69 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 RM25_RS03030 373b2bec92b67e790b95ba155d9e29fe 183 SUPERFAMILY SSF51161 8 176 2.22E-52 T 22-04-2016 IPR011004 Trimeric LpxA-like RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 Gene3D G3DSA:3.30.1490.20 129 185 1.1E-16 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 Gene3D G3DSA:3.90.600.10 325 414 4.6E-30 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 SUPERFAMILY SSF51246 324 414 6.28E-25 T 22-04-2016 IPR011054 Rudiment single hybrid motif RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 8 417 38.907 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 9 107 3.5E-28 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 Gene3D G3DSA:3.30.470.20 186 316 3.6E-51 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 326 414 3.6E-25 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 PANTHER PTHR10520 8 413 2.0E-195 T 22-04-2016 RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 284 291 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 SUPERFAMILY SSF52440 8 108 1.09E-29 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 108 290 3.3E-62 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 SMART SM01210 325 417 1.0E-37 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 Gene3D G3DSA:3.40.50.20 10 100 8.9E-31 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 SMART SM01209 108 290 2.9E-108 T 22-04-2016 RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 9 413 6.4E-135 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS01825 d268c1105838613431105ac9dc7d0e6f 426 SUPERFAMILY SSF56059 109 315 4.04E-53 T 22-04-2016 RM25_RS02530 38c97c9e6c659d1954a250c004775559 287 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 68 241 2.6E-37 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RM25_RS02530 38c97c9e6c659d1954a250c004775559 287 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 109 161 2.0E-12 T 22-04-2016 RM25_RS02530 38c97c9e6c659d1954a250c004775559 287 Gene3D G3DSA:3.90.1550.10 47 243 2.1E-68 T 22-04-2016 RM25_RS02530 38c97c9e6c659d1954a250c004775559 287 SUPERFAMILY SSF55681 47 244 1.91E-60 T 22-04-2016 RM25_RS02530 38c97c9e6c659d1954a250c004775559 287 Pfam PF03099 Biotin/lipoate A/B protein ligase family 97 196 1.8E-8 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RM25_RS02530 38c97c9e6c659d1954a250c004775559 287 PANTHER PTHR10993 50 287 2.6E-65 T 22-04-2016 RM25_RS02530 38c97c9e6c659d1954a250c004775559 287 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 105 120 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RM25_RS02530 38c97c9e6c659d1954a250c004775559 287 Hamap MF_00013 Octanoyltransferase [lipB]. 38 246 31.062 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RM25_RS01070 8ba2202f6291a33b37d52ab8e848d057 281 PANTHER PTHR22939:SF79 82 272 2.5E-16 T 22-04-2016 RM25_RS01070 8ba2202f6291a33b37d52ab8e848d057 281 SUPERFAMILY SSF50494 76 268 3.6E-34 T 22-04-2016 IPR009003 Peptidase S1, PA clan RM25_RS01070 8ba2202f6291a33b37d52ab8e848d057 281 PANTHER PTHR22939 82 272 2.5E-16 T 22-04-2016 RM25_RS01070 8ba2202f6291a33b37d52ab8e848d057 281 Gene3D G3DSA:2.40.10.10 90 163 5.6E-19 T 22-04-2016 RM25_RS01070 8ba2202f6291a33b37d52ab8e848d057 281 Gene3D G3DSA:2.40.10.10 164 266 7.3E-16 T 22-04-2016 RM25_RS01070 8ba2202f6291a33b37d52ab8e848d057 281 Pfam PF13365 Trypsin-like peptidase domain 94 238 7.1E-22 T 22-04-2016 RM25_RS01070 8ba2202f6291a33b37d52ab8e848d057 281 PRINTS PR00834 HtrA/DegQ protease family signature 166 190 3.8E-15 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS01070 8ba2202f6291a33b37d52ab8e848d057 281 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 3.8E-15 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS01070 8ba2202f6291a33b37d52ab8e848d057 281 PRINTS PR00834 HtrA/DegQ protease family signature 126 146 3.8E-15 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS01070 8ba2202f6291a33b37d52ab8e848d057 281 PRINTS PR00834 HtrA/DegQ protease family signature 231 248 3.8E-15 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS01070 8ba2202f6291a33b37d52ab8e848d057 281 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 3.8E-15 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RM25_RS04720 aefc1e00ec5595e5c1f6d6ece9a787ce 971 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 14 967 23.384 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 RM25_RS04720 aefc1e00ec5595e5c1f6d6ece9a787ce 971 SUPERFAMILY SSF53383 23 450 2.79E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS04720 aefc1e00ec5595e5c1f6d6ece9a787ce 971 SUPERFAMILY SSF53383 483 890 2.51E-94 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS04720 aefc1e00ec5595e5c1f6d6ece9a787ce 971 Gene3D G3DSA:3.40.640.10 504 742 4.0E-36 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS04720 aefc1e00ec5595e5c1f6d6ece9a787ce 971 Gene3D G3DSA:3.40.640.10 91 310 2.3E-17 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS04720 aefc1e00ec5595e5c1f6d6ece9a787ce 971 PANTHER PTHR11773 19 959 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RM25_RS04720 aefc1e00ec5595e5c1f6d6ece9a787ce 971 PANTHER PTHR11773:SF1 19 959 0.0 T 22-04-2016 RM25_RS04720 aefc1e00ec5595e5c1f6d6ece9a787ce 971 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 23 960 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 RM25_RS04720 aefc1e00ec5595e5c1f6d6ece9a787ce 971 SUPERFAMILY SSF53383 940 961 2.51E-94 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS04720 aefc1e00ec5595e5c1f6d6ece9a787ce 971 Pfam PF02347 Glycine cleavage system P-protein 23 450 8.1E-165 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RM25_RS04720 aefc1e00ec5595e5c1f6d6ece9a787ce 971 Pfam PF02347 Glycine cleavage system P-protein 620 735 7.9E-8 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RM25_RS07655 6270de74d5ff194b3c688d83e1ee28ec 224 Gene3D G3DSA:3.40.50.1860 1 101 2.6E-25 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS07655 6270de74d5ff194b3c688d83e1ee28ec 224 PANTHER PTHR21198 1 189 2.0E-19 T 22-04-2016 RM25_RS07655 6270de74d5ff194b3c688d83e1ee28ec 224 PANTHER PTHR21198:SF6 1 189 2.0E-19 T 22-04-2016 RM25_RS07655 6270de74d5ff194b3c688d83e1ee28ec 224 Pfam PF01177 Asp/Glu/Hydantoin racemase 1 210 7.8E-42 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS07655 6270de74d5ff194b3c688d83e1ee28ec 224 SUPERFAMILY SSF53681 1 104 7.06E-20 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS07655 6270de74d5ff194b3c688d83e1ee28ec 224 SUPERFAMILY SSF53681 94 194 1.24E-12 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS07655 6270de74d5ff194b3c688d83e1ee28ec 224 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 212 1.0E-31 T 22-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 RM25_RS07655 6270de74d5ff194b3c688d83e1ee28ec 224 Gene3D G3DSA:3.40.50.1860 102 195 1.1E-15 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 96 479 8.7E-40 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 PANTHER PTHR11451:SF3 3 245 6.5E-125 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 PANTHER PTHR11451 420 592 6.5E-125 T 22-04-2016 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 Hamap MF_01569 Proline--tRNA ligase [proS]. 3 589 36.284 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 SUPERFAMILY SSF52954 484 590 1.05E-28 T 22-04-2016 IPR004154 Anticodon-binding RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 4 582 1.7E-164 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 SUPERFAMILY SSF55681 12 238 7.82E-88 T 22-04-2016 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 SUPERFAMILY SSF55681 428 499 7.82E-88 T 22-04-2016 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 Pfam PF04073 Aminoacyl-tRNA editing domain 258 400 3.4E-18 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 Gene3D G3DSA:3.40.50.800 491 590 7.0E-28 T 22-04-2016 IPR004154 Anticodon-binding RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 SUPERFAMILY SSF55826 256 408 5.93E-8 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 Gene3D G3DSA:3.30.930.10 413 489 1.0E-91 T 22-04-2016 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 Gene3D G3DSA:3.30.930.10 8 206 1.0E-91 T 22-04-2016 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 PANTHER PTHR11451:SF3 420 592 6.5E-125 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 Pfam PF03129 Anticodon binding domain 496 584 3.0E-18 T 22-04-2016 IPR004154 Anticodon-binding RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 PRINTS PR01046 Prolyl-tRNA synthetase signature 70 88 4.9E-15 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 PRINTS PR01046 Prolyl-tRNA synthetase signature 146 157 4.9E-15 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 PRINTS PR01046 Prolyl-tRNA synthetase signature 106 117 4.9E-15 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 PRINTS PR01046 Prolyl-tRNA synthetase signature 136 144 4.9E-15 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RM25_RS06850 d551e5c508deff245c5fca2f7da2019d 592 PANTHER PTHR11451 3 245 6.5E-125 T 22-04-2016 RM25_RS05700 fd865f27e1fd4ad2493ce80580830e74 250 Gene3D G3DSA:3.90.1680.10 2 246 4.2E-72 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RM25_RS05700 fd865f27e1fd4ad2493ce80580830e74 250 SUPERFAMILY SSF143081 2 246 3.79E-70 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RM25_RS05700 fd865f27e1fd4ad2493ce80580830e74 250 Pfam PF02586 SOS response associated peptidase (SRAP) 2 234 8.1E-68 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RM25_RS05700 fd865f27e1fd4ad2493ce80580830e74 250 PANTHER PTHR13604 2 246 9.2E-75 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RM25_RS07925 79674b2e3f8a1cee94b555e76dc9f29c 406 Pfam PF13742 OB-fold nucleic acid binding domain 2 91 1.1E-9 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 RM25_RS07925 79674b2e3f8a1cee94b555e76dc9f29c 406 Pfam PF02601 Exonuclease VII, large subunit 116 331 5.5E-61 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RM25_RS07925 79674b2e3f8a1cee94b555e76dc9f29c 406 Pfam PF02601 Exonuclease VII, large subunit 320 384 6.0E-10 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RM25_RS07925 79674b2e3f8a1cee94b555e76dc9f29c 406 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 3 388 20.792 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RM25_RS07925 79674b2e3f8a1cee94b555e76dc9f29c 406 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 3 387 3.7E-113 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RM25_RS07925 79674b2e3f8a1cee94b555e76dc9f29c 406 PANTHER PTHR30008 1 400 2.8E-111 T 22-04-2016 RM25_RS07925 79674b2e3f8a1cee94b555e76dc9f29c 406 PANTHER PTHR30008:SF0 1 400 2.8E-111 T 22-04-2016 RM25_RS01385 6fc89029c3358046ae6513e9193b7cbe 446 Pfam PF14067 LssY C-terminus 82 270 4.6E-74 T 22-04-2016 IPR025902 LssY-like C-terminal domain RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 SUPERFAMILY SSF53244 351 493 5.49E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 Gene3D G3DSA:3.40.1190.10 118 346 3.4E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 Gene3D G3DSA:3.40.50.720 25 116 5.3E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 PANTHER PTHR23135:SF2 17 494 5.1E-122 T 22-04-2016 RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 SUPERFAMILY SSF53623 129 345 3.79E-41 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 135 158 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 25 493 29.912 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 SUPERFAMILY SSF51984 23 117 4.32E-15 T 22-04-2016 RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 Pfam PF02875 Mur ligase family, glutamate ligase domain 351 419 2.1E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 PANTHER PTHR23135 17 494 5.1E-122 T 22-04-2016 RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 Gene3D G3DSA:3.90.190.20 351 490 3.0E-41 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 26 491 3.8E-107 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS07260 333aad6a3de0052e4950fc9890592530 499 Pfam PF08245 Mur ligase middle domain 137 328 1.1E-18 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS04030 b232c76bc6bc501a8c1267f62ede5a2a 430 Gene3D G3DSA:2.30.40.10 24 62 4.9E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RM25_RS04030 b232c76bc6bc501a8c1267f62ede5a2a 430 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 40 422 1.1E-109 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS04030 b232c76bc6bc501a8c1267f62ede5a2a 430 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 424 38.219 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS04030 b232c76bc6bc501a8c1267f62ede5a2a 430 PANTHER PTHR11647:SF70 24 425 7.5E-138 T 22-04-2016 RM25_RS04030 b232c76bc6bc501a8c1267f62ede5a2a 430 SUPERFAMILY SSF51556 50 362 5.45E-89 T 22-04-2016 IPR032466 Metal-dependent hydrolase RM25_RS04030 b232c76bc6bc501a8c1267f62ede5a2a 430 Gene3D G3DSA:3.20.20.140 63 402 2.0E-92 T 22-04-2016 RM25_RS04030 b232c76bc6bc501a8c1267f62ede5a2a 430 ProSitePatterns PS00483 Dihydroorotase signature 2. 299 310 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS04030 b232c76bc6bc501a8c1267f62ede5a2a 430 SUPERFAMILY SSF51338 366 427 1.15E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RM25_RS04030 b232c76bc6bc501a8c1267f62ede5a2a 430 SUPERFAMILY SSF51338 12 48 1.15E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RM25_RS04030 b232c76bc6bc501a8c1267f62ede5a2a 430 Pfam PF01979 Amidohydrolase family 45 418 1.1E-18 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RM25_RS04030 b232c76bc6bc501a8c1267f62ede5a2a 430 PANTHER PTHR11647 24 425 7.5E-138 T 22-04-2016 RM25_RS01290 35ff57acfbbb15b6abf229c1fbfecd4c 72 SUPERFAMILY SSF69047 6 62 1.57E-10 T 22-04-2016 IPR008462 CsbD-like RM25_RS01290 35ff57acfbbb15b6abf229c1fbfecd4c 72 Pfam PF07554 Uncharacterised Sugar-binding Domain 2 26 0.09 T 22-04-2016 IPR011490 FIVAR domain RM25_RS01290 35ff57acfbbb15b6abf229c1fbfecd4c 72 Gene3D G3DSA:1.10.1470.10 4 63 8.2E-15 T 22-04-2016 IPR008462 CsbD-like RM25_RS01290 35ff57acfbbb15b6abf229c1fbfecd4c 72 Pfam PF05532 CsbD-like 4 53 1.6E-13 T 22-04-2016 IPR008462 CsbD-like RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 PANTHER PTHR10836 1 334 9.6E-216 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 SMART SM00846 3 153 3.0E-96 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 5.1E-138 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 313 1.5E-67 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 153 4.8E-63 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 PANTHER PTHR10836:SF50 1 334 9.6E-216 T 22-04-2016 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 SUPERFAMILY SSF55347 152 313 2.05E-71 T 22-04-2016 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 Gene3D G3DSA:3.30.360.10 162 315 5.4E-75 T 22-04-2016 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 SUPERFAMILY SSF51735 1 180 4.14E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 Gene3D G3DSA:3.40.50.720 1 161 6.2E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 PIRSF PIRSF000149 1 334 2.7E-135 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 1.1E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 1.1E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.1E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.1E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RM25_RS07070 a1569d418c0c707a6f2b915ed032434c 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 1.1E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RM25_RS11160 2bf0ff39eb45cc6fac740a75b4c5afa4 711 Pfam PF00912 Transglycosylase 89 261 3.1E-54 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RM25_RS11160 2bf0ff39eb45cc6fac740a75b4c5afa4 711 SUPERFAMILY SSF53955 74 276 5.06E-59 T 22-04-2016 IPR023346 Lysozyme-like domain RM25_RS11160 2bf0ff39eb45cc6fac740a75b4c5afa4 711 Pfam PF00905 Penicillin binding protein transpeptidase domain 369 609 6.6E-26 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RM25_RS11160 2bf0ff39eb45cc6fac740a75b4c5afa4 711 PANTHER PTHR32282:SF8 14 708 1.7E-125 T 22-04-2016 RM25_RS11160 2bf0ff39eb45cc6fac740a75b4c5afa4 711 Gene3D G3DSA:3.40.710.10 263 675 4.8E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS11160 2bf0ff39eb45cc6fac740a75b4c5afa4 711 PANTHER PTHR32282 14 708 1.7E-125 T 22-04-2016 RM25_RS11160 2bf0ff39eb45cc6fac740a75b4c5afa4 711 Gene3D G3DSA:1.10.3810.10 88 262 1.9E-61 T 22-04-2016 RM25_RS11160 2bf0ff39eb45cc6fac740a75b4c5afa4 711 SUPERFAMILY SSF56601 296 660 6.02E-71 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS11160 2bf0ff39eb45cc6fac740a75b4c5afa4 711 SUPERFAMILY SSF56601 250 265 6.02E-71 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS11725 b4ee070eeb17644b8968f93a53f419cf 412 Gene3D G3DSA:3.40.50.1820 43 198 3.2E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS11725 b4ee070eeb17644b8968f93a53f419cf 412 Gene3D G3DSA:3.40.50.1820 267 331 3.2E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS11725 b4ee070eeb17644b8968f93a53f419cf 412 PANTHER PTHR33630:SF2 1 108 5.7E-12 T 22-04-2016 RM25_RS11725 b4ee070eeb17644b8968f93a53f419cf 412 PANTHER PTHR33630:SF2 128 196 5.7E-12 T 22-04-2016 RM25_RS11725 b4ee070eeb17644b8968f93a53f419cf 412 Pfam PF01083 Cutinase 53 291 8.5E-14 T 22-04-2016 IPR000675 Cutinase/acetylxylan esterase GO:0008152|GO:0016787 RM25_RS11725 b4ee070eeb17644b8968f93a53f419cf 412 PANTHER PTHR33630 128 196 5.7E-12 T 22-04-2016 RM25_RS11725 b4ee070eeb17644b8968f93a53f419cf 412 SUPERFAMILY SSF53474 259 288 7.54E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS11725 b4ee070eeb17644b8968f93a53f419cf 412 SUPERFAMILY SSF53474 47 191 7.54E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS11725 b4ee070eeb17644b8968f93a53f419cf 412 PANTHER PTHR33630 1 108 5.7E-12 T 22-04-2016 RM25_RS11725 b4ee070eeb17644b8968f93a53f419cf 412 SMART SM01110 51 355 6.9E-18 T 22-04-2016 IPR000675 Cutinase/acetylxylan esterase GO:0008152|GO:0016787 RM25_RS10180 fa074de11c26998f2a956cd015d109ba 163 SUPERFAMILY SSF53218 4 156 1.31E-36 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS10180 fa074de11c26998f2a956cd015d109ba 163 Gene3D G3DSA:3.40.980.10 4 157 3.9E-44 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS10180 fa074de11c26998f2a956cd015d109ba 163 PANTHER PTHR10192 4 159 2.1E-37 T 22-04-2016 RM25_RS10180 fa074de11c26998f2a956cd015d109ba 163 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 143 1.6E-25 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS10180 fa074de11c26998f2a956cd015d109ba 163 Pfam PF00994 Probable molybdopterin binding domain 4 150 3.2E-29 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS10180 fa074de11c26998f2a956cd015d109ba 163 SMART SM00852 4 151 3.2E-18 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS10180 fa074de11c26998f2a956cd015d109ba 163 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 63 76 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 RM25_RS03470 1332866e002311ed44417ef770a09225 359 PANTHER PTHR13414 42 328 9.1E-81 T 22-04-2016 RM25_RS03470 1332866e002311ed44417ef770a09225 359 SUPERFAMILY SSF161111 42 265 7.59E-35 T 22-04-2016 RM25_RS03470 1332866e002311ed44417ef770a09225 359 Gene3D G3DSA:1.20.1510.10 44 259 4.9E-30 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RM25_RS03470 1332866e002311ed44417ef770a09225 359 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 45 338 1.8E-38 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RM25_RS03470 1332866e002311ed44417ef770a09225 359 Pfam PF01545 Cation efflux family 48 260 4.0E-31 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RM25_RS03470 1332866e002311ed44417ef770a09225 359 Gene3D G3DSA:3.30.70.1350 266 337 5.6E-8 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RM25_RS03470 1332866e002311ed44417ef770a09225 359 SUPERFAMILY SSF160240 270 339 4.45E-8 T 22-04-2016 RM25_RS03710 349747059339c9ccaadd4fdedd6bbb96 615 Pfam PF00350 Dynamin family 75 114 1.3E-4 T 22-04-2016 IPR022812 Dynamin superfamily RM25_RS03710 349747059339c9ccaadd4fdedd6bbb96 615 Gene3D G3DSA:3.40.50.300 74 117 3.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03710 349747059339c9ccaadd4fdedd6bbb96 615 Gene3D G3DSA:3.40.50.300 153 236 3.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03710 349747059339c9ccaadd4fdedd6bbb96 615 SUPERFAMILY SSF52540 70 249 1.45E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08225 f5fa533e617e897e5c8bce36c165b758 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 124 16.997 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RM25_RS08225 f5fa533e617e897e5c8bce36c165b758 126 PANTHER PTHR28259 5 123 9.2E-23 T 22-04-2016 RM25_RS08225 f5fa533e617e897e5c8bce36c165b758 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 10 119 1.9E-17 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RM25_RS00335 a6acc489e7e50693b6d98fc1e597c510 395 SUPERFAMILY SSF54373 256 327 1.14E-22 T 22-04-2016 RM25_RS00335 a6acc489e7e50693b6d98fc1e597c510 395 SUPERFAMILY SSF51971 4 274 4.71E-42 T 22-04-2016 RM25_RS00335 a6acc489e7e50693b6d98fc1e597c510 395 SUPERFAMILY SSF51971 345 374 4.71E-42 T 22-04-2016 RM25_RS00335 a6acc489e7e50693b6d98fc1e597c510 395 PANTHER PTHR21197 3 395 6.4E-98 T 22-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 RM25_RS00335 a6acc489e7e50693b6d98fc1e597c510 395 Pfam PF03275 UDP-galactopyranose mutase 151 360 2.4E-82 T 22-04-2016 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 RM25_RS00335 a6acc489e7e50693b6d98fc1e597c510 395 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 4 377 7.2E-102 T 22-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 RM25_RS00335 a6acc489e7e50693b6d98fc1e597c510 395 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 76 2.3E-18 T 22-04-2016 RM25_RS00335 a6acc489e7e50693b6d98fc1e597c510 395 Gene3D G3DSA:3.40.50.720 2 82 2.9E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00335 a6acc489e7e50693b6d98fc1e597c510 395 Gene3D G3DSA:3.40.50.720 335 381 2.9E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00335 a6acc489e7e50693b6d98fc1e597c510 395 Gene3D G3DSA:3.40.50.720 186 265 2.9E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07625 a8a49364720b03683f55168ae5e36d6f 322 Gene3D G3DSA:3.40.50.720 2 116 2.5E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07625 a8a49364720b03683f55168ae5e36d6f 322 Gene3D G3DSA:3.40.50.720 117 290 5.3E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07625 a8a49364720b03683f55168ae5e36d6f 322 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 1.5E-28 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RM25_RS07625 a8a49364720b03683f55168ae5e36d6f 322 SUPERFAMILY SSF51735 103 289 7.42E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS07625 a8a49364720b03683f55168ae5e36d6f 322 PANTHER PTHR10996 1 319 6.7E-114 T 22-04-2016 RM25_RS07625 a8a49364720b03683f55168ae5e36d6f 322 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 199 221 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RM25_RS07625 a8a49364720b03683f55168ae5e36d6f 322 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 288 1.9E-60 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RM25_RS07625 a8a49364720b03683f55168ae5e36d6f 322 SUPERFAMILY SSF52283 1 136 2.55E-31 T 22-04-2016 RM25_RS10735 15fedc5260e64258cd3a05fbfb8d5cf7 114 PANTHER PTHR32552 9 101 5.7E-15 T 22-04-2016 RM25_RS10735 15fedc5260e64258cd3a05fbfb8d5cf7 114 SUPERFAMILY SSF53098 10 99 9.1E-13 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10735 15fedc5260e64258cd3a05fbfb8d5cf7 114 Gene3D G3DSA:3.30.420.10 10 94 1.4E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10735 15fedc5260e64258cd3a05fbfb8d5cf7 114 Pfam PF13683 Integrase core domain 24 93 2.0E-11 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS06165 a9c8fb29647ca20fc337542c4effc782 250 PANTHER PTHR22769:SF42 34 205 4.7E-23 T 22-04-2016 RM25_RS06165 a9c8fb29647ca20fc337542c4effc782 250 Gene3D G3DSA:3.90.79.10 7 142 2.0E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS06165 a9c8fb29647ca20fc337542c4effc782 250 Gene3D G3DSA:1.10.10.10 146 226 3.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS06165 a9c8fb29647ca20fc337542c4effc782 250 PANTHER PTHR22769 34 205 4.7E-23 T 22-04-2016 RM25_RS06165 a9c8fb29647ca20fc337542c4effc782 250 SUPERFAMILY SSF55811 32 149 1.08E-21 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS06165 a9c8fb29647ca20fc337542c4effc782 250 SUPERFAMILY SSF46785 153 225 3.54E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS09810 17a13ed32886ea6f8245ce5bb6f2a9a0 370 SUPERFAMILY SSF51395 3 354 3.66E-97 T 22-04-2016 RM25_RS09810 17a13ed32886ea6f8245ce5bb6f2a9a0 370 PANTHER PTHR22893:SF7 2 357 1.7E-130 T 22-04-2016 RM25_RS09810 17a13ed32886ea6f8245ce5bb6f2a9a0 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 349 1.8E-60 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RM25_RS09810 17a13ed32886ea6f8245ce5bb6f2a9a0 370 Gene3D G3DSA:3.20.20.70 3 354 2.7E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS09810 17a13ed32886ea6f8245ce5bb6f2a9a0 370 PANTHER PTHR22893 2 357 1.7E-130 T 22-04-2016 RM25_RS10790 5014ec72c31a84340cde96e33f51251d 199 Pfam PF03167 Uracil DNA glycosylase superfamily 20 179 9.9E-20 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RM25_RS10790 5014ec72c31a84340cde96e33f51251d 199 SMART SM00986 19 194 0.001 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RM25_RS10790 5014ec72c31a84340cde96e33f51251d 199 SMART SM00987 19 194 0.001 T 22-04-2016 RM25_RS10790 5014ec72c31a84340cde96e33f51251d 199 SUPERFAMILY SSF52141 17 191 2.4E-30 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RM25_RS10790 5014ec72c31a84340cde96e33f51251d 199 Gene3D G3DSA:3.40.470.10 18 191 8.0E-42 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RM25_RS10790 5014ec72c31a84340cde96e33f51251d 199 PANTHER PTHR12159 16 191 1.9E-37 T 22-04-2016 IPR015637 G/U mismatch-specific DNA glycosylase GO:0006281|GO:0019104 RM25_RS11135 50a0cdb0b6f750c57ed2dd3b89269629 208 PANTHER PTHR30037:SF4 14 200 1.6E-84 T 22-04-2016 RM25_RS11135 50a0cdb0b6f750c57ed2dd3b89269629 208 SUPERFAMILY SSF48150 28 201 7.63E-63 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RM25_RS11135 50a0cdb0b6f750c57ed2dd3b89269629 208 Pfam PF03352 Methyladenine glycosylase 32 200 5.8E-63 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 RM25_RS11135 50a0cdb0b6f750c57ed2dd3b89269629 208 Gene3D G3DSA:1.10.340.30 28 201 6.8E-69 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RM25_RS11135 50a0cdb0b6f750c57ed2dd3b89269629 208 PANTHER PTHR30037 14 200 1.6E-84 T 22-04-2016 RM25_RS03925 06697edba26ac442e5b5fcd6f40eaaa0 647 SMART SM00729 270 493 6.2E-25 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RM25_RS03925 06697edba26ac442e5b5fcd6f40eaaa0 647 PANTHER PTHR11918:SF77 236 624 6.6E-204 T 22-04-2016 RM25_RS03925 06697edba26ac442e5b5fcd6f40eaaa0 647 Pfam PF04055 Radical SAM superfamily 274 439 2.3E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RM25_RS03925 06697edba26ac442e5b5fcd6f40eaaa0 647 PANTHER PTHR11918:SF77 80 202 6.6E-204 T 22-04-2016 RM25_RS03925 06697edba26ac442e5b5fcd6f40eaaa0 647 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 19 624 2.2E-197 T 22-04-2016 IPR023862 Conserved hypothetical protein CHP03960, radical SAM RM25_RS03925 06697edba26ac442e5b5fcd6f40eaaa0 647 SUPERFAMILY SSF102114 232 626 2.88E-44 T 22-04-2016 RM25_RS03925 06697edba26ac442e5b5fcd6f40eaaa0 647 PANTHER PTHR11918 80 202 6.6E-204 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RM25_RS03925 06697edba26ac442e5b5fcd6f40eaaa0 647 PANTHER PTHR11918 236 624 6.6E-204 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RM25_RS03925 06697edba26ac442e5b5fcd6f40eaaa0 647 Gene3D G3DSA:3.80.30.20 269 500 1.0E-41 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 SUPERFAMILY SSF51604 144 419 1.84E-101 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 SMART SM01193 6 136 9.9E-63 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 PRINTS PR00148 Enolase signature 109 125 3.8E-42 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 PRINTS PR00148 Enolase signature 39 53 3.8E-42 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 PRINTS PR00148 Enolase signature 315 326 3.8E-42 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 PRINTS PR00148 Enolase signature 338 352 3.8E-42 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 PRINTS PR00148 Enolase signature 367 384 3.8E-42 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 PRINTS PR00148 Enolase signature 165 178 3.8E-42 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 Gene3D G3DSA:3.30.390.10 5 127 1.4E-40 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 ProSitePatterns PS00164 Enolase signature. 338 351 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 Pfam PF00113 Enolase, C-terminal TIM barrel domain 146 413 7.3E-100 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 Hamap MF_00318 Enolase [eno]. 4 415 38.535 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 Pfam PF03952 Enolase, N-terminal domain 6 136 8.2E-45 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 SUPERFAMILY SSF54826 6 139 1.19E-41 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 6 414 6.4E-158 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 PANTHER PTHR11902 5 411 5.6E-183 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 PIRSF PIRSF001400 2 420 3.3E-158 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 Gene3D G3DSA:3.20.20.120 132 414 1.5E-101 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RM25_RS08055 600d57a0df87253dd68a870c7aba2228 423 SMART SM01192 143 421 2.9E-154 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RM25_RS11640 c3f68b2589517fa7b8871aa8437daf8b 802 PANTHER PTHR22916 471 748 9.6E-25 T 22-04-2016 RM25_RS11640 c3f68b2589517fa7b8871aa8437daf8b 802 Gene3D G3DSA:3.90.550.10 472 683 1.5E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS11640 c3f68b2589517fa7b8871aa8437daf8b 802 SUPERFAMILY SSF53448 470 682 3.0E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS11640 c3f68b2589517fa7b8871aa8437daf8b 802 PANTHER PTHR22916:SF3 471 748 9.6E-25 T 22-04-2016 RM25_RS11640 c3f68b2589517fa7b8871aa8437daf8b 802 Pfam PF00535 Glycosyl transferase family 2 475 642 6.2E-17 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RM25_RS11640 c3f68b2589517fa7b8871aa8437daf8b 802 Pfam PF04230 Polysaccharide pyruvyl transferase 16 318 8.9E-32 T 22-04-2016 IPR007345 Polysaccharide pyruvyl transferase RM25_RS02490 bce10fc4c094a86d36713c9ca0150c2a 143 Gene3D G3DSA:3.10.129.10 6 131 4.3E-33 T 22-04-2016 IPR029069 HotDog domain RM25_RS02490 bce10fc4c094a86d36713c9ca0150c2a 143 PANTHER PTHR13078 9 129 2.1E-15 T 22-04-2016 RM25_RS02490 bce10fc4c094a86d36713c9ca0150c2a 143 Pfam PF01575 MaoC like domain 18 124 4.2E-22 T 22-04-2016 IPR002539 MaoC-like domain RM25_RS02490 bce10fc4c094a86d36713c9ca0150c2a 143 SUPERFAMILY SSF54637 10 131 2.3E-24 T 22-04-2016 IPR029069 HotDog domain RM25_RS01365 a67ebdf11159ddc0b556dbe4497a0422 349 Gene3D G3DSA:3.40.50.720 65 146 1.5E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01365 a67ebdf11159ddc0b556dbe4497a0422 349 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 251 267 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RM25_RS01365 a67ebdf11159ddc0b556dbe4497a0422 349 PANTHER PTHR10996 120 344 1.9E-53 T 22-04-2016 RM25_RS01365 a67ebdf11159ddc0b556dbe4497a0422 349 SUPERFAMILY SSF51735 133 313 1.07E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01365 a67ebdf11159ddc0b556dbe4497a0422 349 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 141 312 1.0E-46 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RM25_RS01365 a67ebdf11159ddc0b556dbe4497a0422 349 Gene3D G3DSA:3.40.50.720 147 313 1.7E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 Pfam PF01595 Domain of unknown function DUF21 9 196 6.0E-40 T 22-04-2016 IPR002550 Domain of unknown function DUF21 RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 SMART SM01091 346 444 1.3E-15 T 22-04-2016 IPR005170 Transporter-associated domain RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 SUPERFAMILY SSF54631 210 345 2.15E-28 T 22-04-2016 RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 Gene3D G3DSA:3.10.580.10 199 340 6.7E-15 T 22-04-2016 RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 PANTHER PTHR22777 7 398 2.4E-123 T 22-04-2016 RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 PANTHER PTHR22777 419 448 2.4E-123 T 22-04-2016 RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 Pfam PF03471 Transporter associated domain 354 441 1.5E-18 T 22-04-2016 IPR005170 Transporter-associated domain RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 SUPERFAMILY SSF56176 353 446 2.13E-15 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 PANTHER PTHR22777:SF8 419 448 2.4E-123 T 22-04-2016 RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 PANTHER PTHR22777:SF8 7 398 2.4E-123 T 22-04-2016 RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 Gene3D G3DSA:3.30.465.10 347 446 7.2E-21 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 SMART SM00116 222 271 17.0 T 22-04-2016 IPR000644 CBS domain RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 SMART SM00116 284 332 0.38 T 22-04-2016 IPR000644 CBS domain RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 Pfam PF00571 CBS domain 283 331 2.7E-5 T 22-04-2016 IPR000644 CBS domain RM25_RS03200 7ea6258fb9c4cc170d44da8384d24bb2 470 Pfam PF00571 CBS domain 219 267 1.2E-4 T 22-04-2016 IPR000644 CBS domain RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 80 509 30.883 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 Pfam PF04542 Sigma-70 region 2 276 345 7.6E-22 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 SUPERFAMILY SSF88659 407 508 2.06E-27 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 272 508 6.8E-113 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 Pfam PF04539 Sigma-70 region 3 355 431 3.7E-29 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 300 313 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 Gene3D G3DSA:1.10.10.10 349 400 1.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 Pfam PF00140 Sigma-70 factor, region 1.2 210 243 4.7E-14 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 469 495 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 272 497 4.6E-36 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 Pfam PF04545 Sigma-70, region 4 444 497 2.9E-18 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 SUPERFAMILY SSF88946 207 346 1.12E-50 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 Gene3D G3DSA:1.10.10.10 438 509 1.6E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 Gene3D G3DSA:1.10.601.10 46 345 5.5E-69 T 22-04-2016 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 PRINTS PR00046 Major sigma-70 factor signature 300 313 6.6E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 PRINTS PR00046 Major sigma-70 factor signature 469 484 6.6E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 PRINTS PR00046 Major sigma-70 factor signature 484 495 6.6E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 PRINTS PR00046 Major sigma-70 factor signature 448 460 6.6E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 PRINTS PR00046 Major sigma-70 factor signature 324 332 6.6E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 SUPERFAMILY SSF88659 349 422 2.62E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 PANTHER PTHR30603 159 509 5.2E-204 T 22-04-2016 RM25_RS04455 f7c8b6c71b2ac12fa388505a306ea661 509 PANTHER PTHR30603:SF0 159 509 5.2E-204 T 22-04-2016 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 246 262 2.5E-52 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 195 214 2.5E-52 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 301 320 2.5E-52 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 271 286 2.5E-52 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 157 176 2.5E-52 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 126 140 2.5E-52 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 SMART SM01004 8 327 1.0E-192 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 246 258 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 SUPERFAMILY SSF51569 8 329 1.9E-126 T 22-04-2016 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 PANTHER PTHR11458 6 329 2.3E-149 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 Pfam PF00490 Delta-aminolevulinic acid dehydratase 11 326 1.2E-129 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 PIRSF PIRSF001415 2 330 4.6E-136 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RM25_RS08870 28e5a818c9099a986192ef6e0b2200f1 332 Gene3D G3DSA:3.20.20.70 8 329 3.2E-132 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS09120 139f14b382ba4f5cabe8fceb424a73c8 722 SUPERFAMILY SSF53955 50 258 8.15E-57 T 22-04-2016 IPR023346 Lysozyme-like domain RM25_RS09120 139f14b382ba4f5cabe8fceb424a73c8 722 PANTHER PTHR32282 1 716 1.3E-112 T 22-04-2016 RM25_RS09120 139f14b382ba4f5cabe8fceb424a73c8 722 Gene3D G3DSA:1.10.3810.10 60 250 2.2E-61 T 22-04-2016 RM25_RS09120 139f14b382ba4f5cabe8fceb424a73c8 722 Gene3D G3DSA:3.40.710.10 302 709 1.4E-70 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS09120 139f14b382ba4f5cabe8fceb424a73c8 722 Gene3D G3DSA:3.40.710.10 251 261 1.4E-70 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS09120 139f14b382ba4f5cabe8fceb424a73c8 722 PANTHER PTHR32282:SF0 1 716 1.3E-112 T 22-04-2016 RM25_RS09120 139f14b382ba4f5cabe8fceb424a73c8 722 SUPERFAMILY SSF56601 301 706 1.01E-61 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS09120 139f14b382ba4f5cabe8fceb424a73c8 722 SUPERFAMILY SSF56601 236 258 1.01E-61 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS09120 139f14b382ba4f5cabe8fceb424a73c8 722 Pfam PF00905 Penicillin binding protein transpeptidase domain 366 643 6.0E-28 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RM25_RS09120 139f14b382ba4f5cabe8fceb424a73c8 722 Pfam PF00912 Transglycosylase 59 254 4.7E-54 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 Gene3D G3DSA:3.40.50.1820 23 324 3.5E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 Pfam PF00561 alpha/beta hydrolase fold 53 323 4.0E-25 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 PANTHER PTHR10992 241 337 1.8E-106 T 22-04-2016 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 PANTHER PTHR10992 18 191 1.8E-106 T 22-04-2016 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 144 157 4.3E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 77 92 4.3E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 130 143 4.3E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 PANTHER PTHR10992:SF860 241 337 1.8E-106 T 22-04-2016 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 PANTHER PTHR10992:SF860 18 191 1.8E-106 T 22-04-2016 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 SUPERFAMILY SSF53474 18 324 2.83E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 26 336 3.9E-106 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 PIRSF PIRSF006431 17 341 1.3E-120 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 54 62 2.2E-12 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 80 91 2.2E-12 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RM25_RS04125 1a962264ca3dc4b537a3d0562f3de758 341 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 130 144 2.2E-12 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RM25_RS06570 ff023caf7bc7ae45534a30ed33ac3a2a 418 PANTHER PTHR10890:SF5 1 388 6.8E-163 T 22-04-2016 RM25_RS06570 ff023caf7bc7ae45534a30ed33ac3a2a 418 SUPERFAMILY SSF52374 42 343 4.83E-68 T 22-04-2016 RM25_RS06570 ff023caf7bc7ae45534a30ed33ac3a2a 418 Hamap MF_01697 L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [mshC]. 9 418 49.296 T 22-04-2016 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 RM25_RS06570 ff023caf7bc7ae45534a30ed33ac3a2a 418 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 251 272 2.0E-20 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RM25_RS06570 ff023caf7bc7ae45534a30ed33ac3a2a 418 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 220 238 2.0E-20 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RM25_RS06570 ff023caf7bc7ae45534a30ed33ac3a2a 418 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 83 92 2.0E-20 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RM25_RS06570 ff023caf7bc7ae45534a30ed33ac3a2a 418 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 47 58 2.0E-20 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RM25_RS06570 ff023caf7bc7ae45534a30ed33ac3a2a 418 PANTHER PTHR10890 1 388 6.8E-163 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RM25_RS06570 ff023caf7bc7ae45534a30ed33ac3a2a 418 TIGRFAM TIGR03447 mycothiol_MshC: cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase 2 418 4.8E-178 T 22-04-2016 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 RM25_RS06570 ff023caf7bc7ae45534a30ed33ac3a2a 418 Gene3D G3DSA:3.40.50.620 46 335 3.3E-76 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS06570 ff023caf7bc7ae45534a30ed33ac3a2a 418 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 44 343 8.6E-82 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RM25_RS09150 317e4512fff1d1b204b1e4ff45c77b67 117 Gene3D G3DSA:3.10.290.10 2 84 5.7E-29 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS09150 317e4512fff1d1b204b1e4ff45c77b67 117 SMART SM00363 2 66 5.4E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS09150 317e4512fff1d1b204b1e4ff45c77b67 117 SUPERFAMILY SSF55174 3 84 2.22E-24 T 22-04-2016 RM25_RS09150 317e4512fff1d1b204b1e4ff45c77b67 117 Pfam PF01479 S4 domain 3 48 8.5E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS09150 317e4512fff1d1b204b1e4ff45c77b67 117 PIRSF PIRSF016821 1 117 3.4E-41 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 RM25_RS03075 56d37efff1df57a28d79b649f4295b71 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 329 2.0E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RM25_RS03075 56d37efff1df57a28d79b649f4295b71 342 PANTHER PTHR32196 17 341 5.7E-74 T 22-04-2016 RM25_RS03075 56d37efff1df57a28d79b649f4295b71 342 PANTHER PTHR32196:SF21 17 341 5.7E-74 T 22-04-2016 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 Pfam PF01018 GTP1/OBG 6 161 7.0E-55 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 SUPERFAMILY SSF102741 362 437 2.88E-15 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 6 332 2.3E-124 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 PANTHER PTHR11702:SF3 5 341 5.0E-133 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 PANTHER PTHR11702:SF3 452 489 5.0E-133 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 SUPERFAMILY SSF82051 6 161 1.83E-49 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 Gene3D G3DSA:3.40.50.300 163 340 3.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 PANTHER PTHR11702 5 341 5.0E-133 T 22-04-2016 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 PANTHER PTHR11702 452 489 5.0E-133 T 22-04-2016 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 165 185 4.3E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 248 4.3E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 186 204 4.3E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 213 228 4.3E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 Hamap MF_01454 GTPase Obg [obg]. 5 333 43.651 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 Pfam PF01926 50S ribosome-binding GTPase 164 286 9.6E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 SUPERFAMILY SSF52540 164 348 1.96E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 360 436 8.6E-23 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 Gene3D G3DSA:2.70.210.12 5 159 1.3E-51 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 Pfam PF09269 Domain of unknown function (DUF1967) 360 436 7.9E-21 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 RM25_RS03965 1668e49e1ff2bef9ba0b7bc95b1c4948 489 ProSitePatterns PS00905 GTP1/OBG family signature. 215 228 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 RM25_RS06710 a86b82c65ff029aea27b116abde09e78 333 SUPERFAMILY SSF46689 4 107 3.23E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS06710 a86b82c65ff029aea27b116abde09e78 333 Gene3D G3DSA:3.30.420.10 190 321 2.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS06710 a86b82c65ff029aea27b116abde09e78 333 Gene3D G3DSA:3.30.420.10 130 158 2.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS06710 a86b82c65ff029aea27b116abde09e78 333 SUPERFAMILY SSF53098 137 148 4.05E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS06710 a86b82c65ff029aea27b116abde09e78 333 SUPERFAMILY SSF53098 187 328 4.05E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS06710 a86b82c65ff029aea27b116abde09e78 333 Pfam PF00665 Integrase core domain 136 284 1.9E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS06710 a86b82c65ff029aea27b116abde09e78 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 74 4.3E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS06710 a86b82c65ff029aea27b116abde09e78 333 PANTHER PTHR24559 183 316 2.6E-16 T 22-04-2016 RM25_RS06710 a86b82c65ff029aea27b116abde09e78 333 PANTHER PTHR24559 125 149 2.6E-16 T 22-04-2016 RM25_RS06710 a86b82c65ff029aea27b116abde09e78 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04275 a86b82c65ff029aea27b116abde09e78 333 SUPERFAMILY SSF46689 4 107 3.23E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS04275 a86b82c65ff029aea27b116abde09e78 333 Gene3D G3DSA:3.30.420.10 190 321 2.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS04275 a86b82c65ff029aea27b116abde09e78 333 Gene3D G3DSA:3.30.420.10 130 158 2.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS04275 a86b82c65ff029aea27b116abde09e78 333 SUPERFAMILY SSF53098 137 148 4.05E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS04275 a86b82c65ff029aea27b116abde09e78 333 SUPERFAMILY SSF53098 187 328 4.05E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS04275 a86b82c65ff029aea27b116abde09e78 333 Pfam PF00665 Integrase core domain 136 284 1.9E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS04275 a86b82c65ff029aea27b116abde09e78 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 74 4.3E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS04275 a86b82c65ff029aea27b116abde09e78 333 PANTHER PTHR24559 183 316 2.6E-16 T 22-04-2016 RM25_RS04275 a86b82c65ff029aea27b116abde09e78 333 PANTHER PTHR24559 125 149 2.6E-16 T 22-04-2016 RM25_RS04275 a86b82c65ff029aea27b116abde09e78 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10170 bc1d023420aef88586dbcdd8b82989a6 488 Gene3D G3DSA:2.40.340.10 398 469 3.3E-10 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS10170 bc1d023420aef88586dbcdd8b82989a6 488 SUPERFAMILY SSF63867 397 469 2.49E-9 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS10170 bc1d023420aef88586dbcdd8b82989a6 488 Gene3D G3DSA:2.170.190.11 112 200 2.3E-30 T 22-04-2016 RM25_RS10170 bc1d023420aef88586dbcdd8b82989a6 488 Gene3D G3DSA:3.40.980.10 231 395 1.0E-45 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS10170 bc1d023420aef88586dbcdd8b82989a6 488 PANTHER PTHR10192 92 486 1.7E-99 T 22-04-2016 RM25_RS10170 bc1d023420aef88586dbcdd8b82989a6 488 SUPERFAMILY SSF63882 92 244 1.96E-43 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS10170 bc1d023420aef88586dbcdd8b82989a6 488 Pfam PF00994 Probable molybdopterin binding domain 259 381 2.1E-24 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS10170 bc1d023420aef88586dbcdd8b82989a6 488 Gene3D G3DSA:3.90.105.10 201 230 1.8E-14 T 22-04-2016 RM25_RS10170 bc1d023420aef88586dbcdd8b82989a6 488 Pfam PF03454 MoeA C-terminal region (domain IV) 404 469 4.5E-9 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS10170 bc1d023420aef88586dbcdd8b82989a6 488 Pfam PF03453 MoeA N-terminal region (domain I and II) 93 235 1.8E-31 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS10170 bc1d023420aef88586dbcdd8b82989a6 488 SMART SM00852 248 387 1.1E-27 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS10170 bc1d023420aef88586dbcdd8b82989a6 488 SUPERFAMILY SSF53218 245 390 3.01E-32 T 22-04-2016 IPR001453 MoaB/Mog domain RM25_RS02405 b7136ddd69f4019cee193a30d08b797c 356 SUPERFAMILY SSF48576 41 355 4.64E-74 T 22-04-2016 IPR008949 Isoprenoid synthase domain RM25_RS02405 b7136ddd69f4019cee193a30d08b797c 356 PANTHER PTHR12001 40 356 2.5E-84 T 22-04-2016 IPR017446 Polyprenyl synthetase-related RM25_RS02405 b7136ddd69f4019cee193a30d08b797c 356 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 238 250 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RM25_RS02405 b7136ddd69f4019cee193a30d08b797c 356 Pfam PF00348 Polyprenyl synthetase 66 304 1.1E-54 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RM25_RS02405 b7136ddd69f4019cee193a30d08b797c 356 Gene3D G3DSA:1.10.600.10 39 355 6.1E-82 T 22-04-2016 IPR008949 Isoprenoid synthase domain RM25_RS00705 666bccb9e34ba71f51531f86dedae370 546 PANTHER PTHR12358 287 546 8.2E-40 T 22-04-2016 RM25_RS00705 666bccb9e34ba71f51531f86dedae370 546 SUPERFAMILY SSF48317 16 219 3.01E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RM25_RS00705 666bccb9e34ba71f51531f86dedae370 546 SUPERFAMILY SSF111331 242 537 1.16E-61 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RM25_RS00705 666bccb9e34ba71f51531f86dedae370 546 Gene3D G3DSA:3.40.50.10330 285 346 9.5E-8 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RM25_RS00705 666bccb9e34ba71f51531f86dedae370 546 Pfam PF01569 PAP2 superfamily 103 217 1.2E-13 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RM25_RS00705 666bccb9e34ba71f51531f86dedae370 546 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 259 536 1.3E-37 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase RM25_RS00705 666bccb9e34ba71f51531f86dedae370 546 SMART SM00014 99 214 3.3E-6 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RM25_RS00705 666bccb9e34ba71f51531f86dedae370 546 Gene3D G3DSA:1.20.144.10 64 216 2.7E-19 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RM25_RS00705 666bccb9e34ba71f51531f86dedae370 546 Pfam PF00781 Diacylglycerol kinase catalytic domain 243 361 9.0E-20 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 Pfam PF13534 4Fe-4S dicluster domain 530 598 4.3E-7 T 22-04-2016 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 PANTHER PTHR11748 16 174 1.8E-177 T 22-04-2016 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 PANTHER PTHR11748 211 553 1.8E-177 T 22-04-2016 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 Gene3D G3DSA:3.30.465.10 93 256 5.7E-21 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 Gene3D G3DSA:3.30.43.10 14 82 1.7E-10 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 Gene3D G3DSA:1.10.1060.10 496 610 2.9E-13 T 22-04-2016 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 Gene3D G3DSA:1.10.45.10 467 495 6.4E-5 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 SUPERFAMILY SSF56176 13 255 6.13E-48 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 PANTHER PTHR11748:SF65 16 174 1.8E-177 T 22-04-2016 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 PANTHER PTHR11748:SF65 211 553 1.8E-177 T 22-04-2016 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 SUPERFAMILY SSF55103 231 511 5.4E-48 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 Pfam PF01565 FAD binding domain 32 168 4.8E-32 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 SUPERFAMILY SSF46548 484 602 1.13E-12 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 531 542 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS01945 adc5839e74d9cb263607858ae1df2526 928 Pfam PF02913 FAD linked oxidases, C-terminal domain 257 505 8.2E-47 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RM25_RS01285 1abf4ccfd1acebde0cb1017ab934fab0 360 Pfam PF00501 AMP-binding enzyme 38 207 6.5E-9 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RM25_RS01285 1abf4ccfd1acebde0cb1017ab934fab0 360 SUPERFAMILY SSF56801 36 346 6.93E-34 T 22-04-2016 RM25_RS01285 1abf4ccfd1acebde0cb1017ab934fab0 360 Gene3D G3DSA:3.40.50.980 38 173 4.3E-8 T 22-04-2016 RM25_RS01285 1abf4ccfd1acebde0cb1017ab934fab0 360 Gene3D G3DSA:3.30.300.30 276 347 3.4E-7 T 22-04-2016 RM25_RS04300 b5eeb85a0f511d491667fc8f812c1746 477 Gene3D G3DSA:2.40.50.140 410 473 4.7E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS04300 b5eeb85a0f511d491667fc8f812c1746 477 SMART SM00729 177 395 8.9E-35 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RM25_RS04300 b5eeb85a0f511d491667fc8f812c1746 477 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 473 58.857 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RM25_RS04300 b5eeb85a0f511d491667fc8f812c1746 477 SUPERFAMILY SSF102114 173 396 1.7E-40 T 22-04-2016 RM25_RS04300 b5eeb85a0f511d491667fc8f812c1746 477 PANTHER PTHR11918 3 473 3.8E-160 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RM25_RS04300 b5eeb85a0f511d491667fc8f812c1746 477 Pfam PF04055 Radical SAM superfamily 183 353 5.1E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RM25_RS04300 b5eeb85a0f511d491667fc8f812c1746 477 Gene3D G3DSA:3.80.30.20 177 398 1.5E-60 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RM25_RS04300 b5eeb85a0f511d491667fc8f812c1746 477 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 168 468 2.2E-78 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RM25_RS04300 b5eeb85a0f511d491667fc8f812c1746 477 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 469 2.5E-125 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RM25_RS04300 b5eeb85a0f511d491667fc8f812c1746 477 PANTHER PTHR11918:SF57 3 473 3.8E-160 T 22-04-2016 RM25_RS04300 b5eeb85a0f511d491667fc8f812c1746 477 Pfam PF00919 Uncharacterized protein family UPF0004 5 104 6.5E-29 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RM25_RS04300 b5eeb85a0f511d491667fc8f812c1746 477 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 181 201 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RM25_RS08370 f584ee064415275da426abc9a23bcb69 333 Gene3D G3DSA:3.30.420.10 130 158 1.2E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS08370 f584ee064415275da426abc9a23bcb69 333 Gene3D G3DSA:3.30.420.10 190 321 1.2E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS08370 f584ee064415275da426abc9a23bcb69 333 SUPERFAMILY SSF46689 4 107 3.23E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS08370 f584ee064415275da426abc9a23bcb69 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 78 2.3E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS08370 f584ee064415275da426abc9a23bcb69 333 SUPERFAMILY SSF53098 137 148 4.3E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS08370 f584ee064415275da426abc9a23bcb69 333 SUPERFAMILY SSF53098 187 328 4.3E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS08370 f584ee064415275da426abc9a23bcb69 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08370 f584ee064415275da426abc9a23bcb69 333 PANTHER PTHR24559 183 316 4.7E-16 T 22-04-2016 RM25_RS08370 f584ee064415275da426abc9a23bcb69 333 PANTHER PTHR24559 125 149 4.7E-16 T 22-04-2016 RM25_RS08370 f584ee064415275da426abc9a23bcb69 333 Pfam PF00665 Integrase core domain 136 284 1.8E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS00220 6369f2bacca5d82a06a23b5c3959a719 512 ProSitePatterns PS00218 Amino acid permeases signature. 54 84 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RM25_RS00220 6369f2bacca5d82a06a23b5c3959a719 512 PIRSF PIRSF006060 14 479 7.0E-67 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS00220 6369f2bacca5d82a06a23b5c3959a719 512 Pfam PF00324 Amino acid permease 29 445 2.3E-101 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RM25_RS00220 6369f2bacca5d82a06a23b5c3959a719 512 PANTHER PTHR11785 18 494 3.7E-179 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS00220 6369f2bacca5d82a06a23b5c3959a719 512 PANTHER PTHR11785:SF336 18 494 3.7E-179 T 22-04-2016 RM25_RS04225 7fd1bdd0a26134bf544575bf87518cd3 532 Pfam PF08502 LeuA allosteric (dimerisation) domain 379 520 1.4E-24 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RM25_RS04225 7fd1bdd0a26134bf544575bf87518cd3 532 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 208 221 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RM25_RS04225 7fd1bdd0a26134bf544575bf87518cd3 532 SMART SM00917 379 524 3.8E-32 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RM25_RS04225 7fd1bdd0a26134bf544575bf87518cd3 532 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 18 34 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RM25_RS04225 7fd1bdd0a26134bf544575bf87518cd3 532 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 10 526 2.5E-183 T 22-04-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101|UniPathway: UPA00047 RM25_RS04225 7fd1bdd0a26134bf544575bf87518cd3 532 Pfam PF00682 HMGL-like 11 279 4.5E-48 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RM25_RS04225 7fd1bdd0a26134bf544575bf87518cd3 532 Gene3D G3DSA:3.20.20.70 6 353 3.6E-114 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS04225 7fd1bdd0a26134bf544575bf87518cd3 532 SUPERFAMILY SSF110921 415 519 6.41E-22 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RM25_RS04225 7fd1bdd0a26134bf544575bf87518cd3 532 PANTHER PTHR10277 1 532 6.6E-228 T 22-04-2016 RM25_RS04225 7fd1bdd0a26134bf544575bf87518cd3 532 SUPERFAMILY SSF51569 4 298 1.47E-81 T 22-04-2016 RM25_RS04225 7fd1bdd0a26134bf544575bf87518cd3 532 PANTHER PTHR10277:SF5 1 532 6.6E-228 T 22-04-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101|UniPathway: UPA00047 RM25_RS06810 8235591cf92b84454d4cc4b9c9bbd591 263 PANTHER PTHR19139:SF147 11 262 6.5E-61 T 22-04-2016 RM25_RS06810 8235591cf92b84454d4cc4b9c9bbd591 263 Pfam PF00230 Major intrinsic protein 5 259 1.8E-34 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RM25_RS06810 8235591cf92b84454d4cc4b9c9bbd591 263 PRINTS PR00783 Major intrinsic protein family signature 11 30 2.3E-27 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RM25_RS06810 8235591cf92b84454d4cc4b9c9bbd591 263 PRINTS PR00783 Major intrinsic protein family signature 96 115 2.3E-27 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RM25_RS06810 8235591cf92b84454d4cc4b9c9bbd591 263 PRINTS PR00783 Major intrinsic protein family signature 151 169 2.3E-27 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RM25_RS06810 8235591cf92b84454d4cc4b9c9bbd591 263 PRINTS PR00783 Major intrinsic protein family signature 242 262 2.3E-27 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RM25_RS06810 8235591cf92b84454d4cc4b9c9bbd591 263 PRINTS PR00783 Major intrinsic protein family signature 195 217 2.3E-27 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RM25_RS06810 8235591cf92b84454d4cc4b9c9bbd591 263 Gene3D G3DSA:1.20.1080.10 10 262 2.2E-72 T 22-04-2016 IPR023271 Aquaporin-like RM25_RS06810 8235591cf92b84454d4cc4b9c9bbd591 263 PANTHER PTHR19139 11 262 6.5E-61 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RM25_RS06810 8235591cf92b84454d4cc4b9c9bbd591 263 SUPERFAMILY SSF81338 13 262 6.93E-55 T 22-04-2016 IPR023271 Aquaporin-like RM25_RS06810 8235591cf92b84454d4cc4b9c9bbd591 263 ProSitePatterns PS00221 MIP family signature. 70 78 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 RM25_RS07650 da6b042dbe2f85f225cb1e789bf1cf9c 431 PANTHER PTHR36106:SF2 1 431 4.5E-190 T 22-04-2016 RM25_RS07650 da6b042dbe2f85f225cb1e789bf1cf9c 431 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 430 1.1E-152 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 RM25_RS07650 da6b042dbe2f85f225cb1e789bf1cf9c 431 PANTHER PTHR36106 1 431 4.5E-190 T 22-04-2016 RM25_RS07650 da6b042dbe2f85f225cb1e789bf1cf9c 431 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 362 5.7E-130 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 RM25_RS07650 da6b042dbe2f85f225cb1e789bf1cf9c 431 PIRSF PIRSF004539 1 431 5.9E-148 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 RM25_RS00215 abc93d898cfc17b78a48ae96c5e563cb 371 Gene3D G3DSA:3.40.50.1770 1 167 1.6E-58 T 22-04-2016 RM25_RS00215 abc93d898cfc17b78a48ae96c5e563cb 371 SMART SM01002 149 297 2.0E-70 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RM25_RS00215 abc93d898cfc17b78a48ae96c5e563cb 371 SUPERFAMILY SSF51735 137 303 5.4E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00215 abc93d898cfc17b78a48ae96c5e563cb 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 142 351 1.0E-71 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RM25_RS00215 abc93d898cfc17b78a48ae96c5e563cb 371 PIRSF PIRSF000183 1 371 6.5E-157 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 RM25_RS00215 abc93d898cfc17b78a48ae96c5e563cb 371 PANTHER PTHR10160 1 365 6.3E-181 T 22-04-2016 RM25_RS00215 abc93d898cfc17b78a48ae96c5e563cb 371 SMART SM01003 4 137 3.3E-81 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RM25_RS00215 abc93d898cfc17b78a48ae96c5e563cb 371 Gene3D G3DSA:3.40.50.720 168 303 3.7E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00215 abc93d898cfc17b78a48ae96c5e563cb 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 364 1.4E-155 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 RM25_RS00215 abc93d898cfc17b78a48ae96c5e563cb 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 2.5E-48 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RM25_RS00215 abc93d898cfc17b78a48ae96c5e563cb 371 SUPERFAMILY SSF52283 305 360 3.15E-65 T 22-04-2016 RM25_RS00215 abc93d898cfc17b78a48ae96c5e563cb 371 SUPERFAMILY SSF52283 1 137 3.15E-65 T 22-04-2016 RM25_RS06170 c505e6daeffcd8d03d17fa6992ec49c5 326 SUPERFAMILY SSF142754 12 318 1.57E-104 T 22-04-2016 RM25_RS06170 c505e6daeffcd8d03d17fa6992ec49c5 326 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 11 319 3.1E-88 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RM25_RS06170 c505e6daeffcd8d03d17fa6992ec49c5 326 PANTHER PTHR30573:SF0 11 321 3.6E-126 T 22-04-2016 RM25_RS06170 c505e6daeffcd8d03d17fa6992ec49c5 326 PANTHER PTHR30573 11 321 3.6E-126 T 22-04-2016 RM25_RS06170 c505e6daeffcd8d03d17fa6992ec49c5 326 Pfam PF02445 Quinolinate synthetase A protein 14 317 5.1E-111 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RM25_RS11575 3a730917d7391b1895211c1f01c19dd6 107 PIRSF PIRSF000077 1 107 5.4E-35 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RM25_RS11575 3a730917d7391b1895211c1f01c19dd6 107 PRINTS PR00421 Thioredoxin family signature 71 82 1.3E-6 T 22-04-2016 RM25_RS11575 3a730917d7391b1895211c1f01c19dd6 107 PRINTS PR00421 Thioredoxin family signature 31 40 1.3E-6 T 22-04-2016 RM25_RS11575 3a730917d7391b1895211c1f01c19dd6 107 PRINTS PR00421 Thioredoxin family signature 23 31 1.3E-6 T 22-04-2016 RM25_RS11575 3a730917d7391b1895211c1f01c19dd6 107 Gene3D G3DSA:3.40.30.10 5 105 1.7E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS11575 3a730917d7391b1895211c1f01c19dd6 107 SUPERFAMILY SSF52833 4 106 3.16E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS11575 3a730917d7391b1895211c1f01c19dd6 107 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 106 4.6E-32 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RM25_RS11575 3a730917d7391b1895211c1f01c19dd6 107 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RM25_RS11575 3a730917d7391b1895211c1f01c19dd6 107 Pfam PF00085 Thioredoxin 5 104 4.9E-32 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RM25_RS11575 3a730917d7391b1895211c1f01c19dd6 107 PANTHER PTHR10438 5 107 5.3E-35 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RM25_RS03460 85b404af0610a87aa44689aed777c8c0 66 Gene3D G3DSA:2.20.25.10 17 64 2.6E-19 T 22-04-2016 RM25_RS03460 85b404af0610a87aa44689aed777c8c0 66 SUPERFAMILY SSF158997 9 64 3.4E-16 T 22-04-2016 RM25_RS03460 85b404af0610a87aa44689aed777c8c0 66 Pfam PF03966 Trm112p-like protein 13 51 1.4E-5 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 RM25_RS03460 85b404af0610a87aa44689aed777c8c0 66 PANTHER PTHR33505 9 65 5.0E-12 T 22-04-2016 RM25_RS09580 fc867aa79c30831798fe7ec10a278389 166 Pfam PF00719 Inorganic pyrophosphatase 1 153 6.9E-51 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RM25_RS09580 fc867aa79c30831798fe7ec10a278389 166 Gene3D G3DSA:3.90.80.10 1 154 1.1E-50 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RM25_RS09580 fc867aa79c30831798fe7ec10a278389 166 PANTHER PTHR10286 1 154 5.5E-57 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RM25_RS09580 fc867aa79c30831798fe7ec10a278389 166 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 1 154 30.187 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RM25_RS09580 fc867aa79c30831798fe7ec10a278389 166 SUPERFAMILY SSF50324 1 155 2.09E-53 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RM25_RS11935 54b23a246be632d7c219997eea10c77e 130 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 91 119 1.5E-5 T 22-04-2016 IPR019933 DivIVA domain RM25_RS11935 54b23a246be632d7c219997eea10c77e 130 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 44 74 6.3E-9 T 22-04-2016 IPR019933 DivIVA domain RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 Gene3D G3DSA:3.10.150.10 122 254 1.9E-25 T 22-04-2016 RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 PIRSF PIRSF000804 1 385 9.1E-81 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 Gene3D G3DSA:3.10.150.10 260 385 1.0E-29 T 22-04-2016 RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 SUPERFAMILY SSF55979 259 384 2.14E-19 T 22-04-2016 RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 SMART SM00480 17 380 5.2E-94 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 SUPERFAMILY SSF55979 126 253 1.05E-16 T 22-04-2016 RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 PANTHER PTHR30478 2 386 1.5E-86 T 22-04-2016 RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 SUPERFAMILY SSF55979 2 118 3.4E-24 T 22-04-2016 RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 384 3.9E-78 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 Pfam PF02767 DNA polymerase III beta subunit, central domain 126 250 3.4E-25 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 2 118 4.1E-31 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 260 368 3.3E-23 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS00040 a51f9e6c0fb0ac4192c701dbd3b1914c 386 Gene3D G3DSA:3.10.150.10 2 120 3.2E-30 T 22-04-2016 RM25_RS03435 884cc35b73c532c4d22bad106a7ff570 1082 Gene3D G3DSA:3.90.550.10 41 268 7.5E-15 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS03435 884cc35b73c532c4d22bad106a7ff570 1082 PANTHER PTHR22916 40 346 5.0E-23 T 22-04-2016 RM25_RS03435 884cc35b73c532c4d22bad106a7ff570 1082 SUPERFAMILY SSF53448 38 267 4.16E-20 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS03435 884cc35b73c532c4d22bad106a7ff570 1082 PANTHER PTHR22916:SF29 40 346 5.0E-23 T 22-04-2016 RM25_RS05355 007886269e42a874d5747af257f6eb1c 489 Gene3D G3DSA:1.10.260.40 1 43 1.2E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS05355 007886269e42a874d5747af257f6eb1c 489 Gene3D G3DSA:3.65.10.10 272 485 4.2E-38 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RM25_RS05355 007886269e42a874d5747af257f6eb1c 489 SUPERFAMILY SSF55205 55 487 2.94E-86 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RM25_RS05355 007886269e42a874d5747af257f6eb1c 489 PANTHER PTHR21090 53 485 1.1E-97 T 22-04-2016 RM25_RS05355 007886269e42a874d5747af257f6eb1c 489 SUPERFAMILY SSF47413 1 43 1.21E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS05355 007886269e42a874d5747af257f6eb1c 489 PANTHER PTHR21090:SF4 53 485 1.1E-97 T 22-04-2016 RM25_RS05355 007886269e42a874d5747af257f6eb1c 489 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 59 475 2.7E-40 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RM25_RS05355 007886269e42a874d5747af257f6eb1c 489 Pfam PF01381 Helix-turn-helix 1 42 2.9E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RM25_RS05355 007886269e42a874d5747af257f6eb1c 489 Gene3D G3DSA:3.65.10.10 71 271 2.5E-35 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RM25_RS03930 c5419136746ad254d2bf01a5785e0ef6 357 Pfam PF01699 Sodium/calcium exchanger protein 214 354 2.0E-12 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 RM25_RS03930 c5419136746ad254d2bf01a5785e0ef6 357 Pfam PF01699 Sodium/calcium exchanger protein 26 179 2.7E-12 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 RM25_RS03930 c5419136746ad254d2bf01a5785e0ef6 357 PANTHER PTHR37958 3 357 3.9E-97 T 22-04-2016 RM25_RS03930 c5419136746ad254d2bf01a5785e0ef6 357 PANTHER PTHR37958:SF1 3 357 3.9E-97 T 22-04-2016 RM25_RS08260 41aea585140a5a60691702a713226a50 477 Gene3D G3DSA:1.20.1250.20 273 462 7.5E-22 T 22-04-2016 RM25_RS08260 41aea585140a5a60691702a713226a50 477 Gene3D G3DSA:1.20.1250.20 25 203 1.0E-32 T 22-04-2016 RM25_RS08260 41aea585140a5a60691702a713226a50 477 Pfam PF07690 Major Facilitator Superfamily 32 421 1.2E-54 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS08260 41aea585140a5a60691702a713226a50 477 SUPERFAMILY SSF103473 11 213 6.41E-74 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS08260 41aea585140a5a60691702a713226a50 477 SUPERFAMILY SSF103473 259 466 6.41E-74 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS08260 41aea585140a5a60691702a713226a50 477 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 31 430 8.5E-85 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RM25_RS08260 41aea585140a5a60691702a713226a50 477 PANTHER PTHR23501 19 464 1.7E-120 T 22-04-2016 RM25_RS08260 41aea585140a5a60691702a713226a50 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 313 337 7.6E-10 T 22-04-2016 RM25_RS08260 41aea585140a5a60691702a713226a50 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 278 303 7.6E-10 T 22-04-2016 RM25_RS08260 41aea585140a5a60691702a713226a50 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 151 175 7.6E-10 T 22-04-2016 RM25_RS08260 41aea585140a5a60691702a713226a50 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 90 112 7.6E-10 T 22-04-2016 RM25_RS08260 41aea585140a5a60691702a713226a50 477 PANTHER PTHR23501:SF48 19 464 1.7E-120 T 22-04-2016 RM25_RS02715 87260068226aba3d897bb86aa6d8714d 398 Pfam PF00296 Luciferase-like monooxygenase 28 269 1.5E-52 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RM25_RS02715 87260068226aba3d897bb86aa6d8714d 398 PANTHER PTHR30137 9 350 6.4E-122 T 22-04-2016 RM25_RS02715 87260068226aba3d897bb86aa6d8714d 398 PANTHER PTHR30137:SF8 9 350 6.4E-122 T 22-04-2016 RM25_RS02715 87260068226aba3d897bb86aa6d8714d 398 Gene3D G3DSA:3.20.20.30 6 343 3.1E-73 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RM25_RS02715 87260068226aba3d897bb86aa6d8714d 398 SUPERFAMILY SSF51679 12 340 3.27E-66 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RM25_RS02715 87260068226aba3d897bb86aa6d8714d 398 TIGRFAM TIGR04036 LLM_CE1758_fam: putative luciferase-like monooxygenase, FMN-dependent, CE1758 family 10 363 1.1E-204 T 22-04-2016 IPR023934 Luciferase-like monooxygenase, FMN-dependent, putative RM25_RS03305 22fc6fc1b98839fa732c96b6ce72c2b5 171 Gene3D G3DSA:3.90.1140.10 54 170 6.3E-5 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RM25_RS03305 22fc6fc1b98839fa732c96b6ce72c2b5 171 SUPERFAMILY SSF55144 7 170 8.37E-11 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RM25_RS03305 22fc6fc1b98839fa732c96b6ce72c2b5 171 Pfam PF13563 2'-5' RNA ligase superfamily 27 160 1.8E-12 T 22-04-2016 RM25_RS04325 81df5f6127670d8b944e810c26099fbe 64 Pfam PF11248 Protein of unknown function (DUF3046) 1 61 4.8E-24 T 22-04-2016 IPR021408 Protein of unknown function DUF3046 RM25_RS11030 ece56961a8e87fb288cef02d51b864cf 396 Pfam PF00155 Aminotransferase class I and II 30 376 5.4E-61 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RM25_RS11030 ece56961a8e87fb288cef02d51b864cf 396 PANTHER PTHR11751:SF428 2 388 1.1E-128 T 22-04-2016 RM25_RS11030 ece56961a8e87fb288cef02d51b864cf 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 90 110 9.4E-11 T 22-04-2016 RM25_RS11030 ece56961a8e87fb288cef02d51b864cf 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 158 182 9.4E-11 T 22-04-2016 RM25_RS11030 ece56961a8e87fb288cef02d51b864cf 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 112 133 9.4E-11 T 22-04-2016 RM25_RS11030 ece56961a8e87fb288cef02d51b864cf 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 194 217 9.4E-11 T 22-04-2016 RM25_RS11030 ece56961a8e87fb288cef02d51b864cf 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 230 243 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RM25_RS11030 ece56961a8e87fb288cef02d51b864cf 396 PANTHER PTHR11751 2 388 1.1E-128 T 22-04-2016 RM25_RS11030 ece56961a8e87fb288cef02d51b864cf 396 Gene3D G3DSA:3.90.1150.10 253 388 1.4E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS11030 ece56961a8e87fb288cef02d51b864cf 396 SUPERFAMILY SSF53383 1 388 3.16E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS11030 ece56961a8e87fb288cef02d51b864cf 396 Gene3D G3DSA:3.40.640.10 42 252 1.0E-74 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS02635 cb1d56c39a70b3557a8b9af7497a505e 161 Gene3D G3DSA:3.90.470.10 22 129 1.2E-37 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RM25_RS02635 cb1d56c39a70b3557a8b9af7497a505e 161 PANTHER PTHR13501 22 126 9.0E-39 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RM25_RS02635 cb1d56c39a70b3557a8b9af7497a505e 161 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 19 128 25.918 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RM25_RS02635 cb1d56c39a70b3557a8b9af7497a505e 161 SUPERFAMILY SSF54843 20 127 3.01E-37 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RM25_RS02635 cb1d56c39a70b3557a8b9af7497a505e 161 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 23 125 1.8E-39 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RM25_RS02635 cb1d56c39a70b3557a8b9af7497a505e 161 Pfam PF00237 Ribosomal protein L22p/L17e 26 125 5.8E-29 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 Pfam PF07549 SecD/SecF GG Motif 62 86 7.1E-8 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 SUPERFAMILY SSF82866 134 333 6.02E-32 T 22-04-2016 RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 67 322 2.2E-62 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 39 333 24.206 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 PRINTS PR01755 Bacterial translocase SecF protein signature 230 248 1.6E-17 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 PRINTS PR01755 Bacterial translocase SecF protein signature 66 81 1.6E-17 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 PRINTS PR01755 Bacterial translocase SecF protein signature 182 196 1.6E-17 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 PRINTS PR01755 Bacterial translocase SecF protein signature 264 279 1.6E-17 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 Gene3D G3DSA:1.20.1640.10 129 338 3.5E-24 T 22-04-2016 RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 PANTHER PTHR30081 29 361 1.6E-62 T 22-04-2016 RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 Pfam PF02355 Protein export membrane protein 143 331 4.9E-53 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 PANTHER PTHR30081:SF8 29 361 1.6E-62 T 22-04-2016 RM25_RS05045 0a1e49eefccec0a6ba2b86c927c88374 415 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 104 319 1.4E-44 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 SUPERFAMILY SSF81653 138 235 3.14E-22 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 Gene3D G3DSA:2.70.150.10 86 236 4.6E-23 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 Gene3D G3DSA:3.40.1110.10 392 493 9.1E-16 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 Gene3D G3DSA:3.40.50.1000 318 336 7.8E-38 T 22-04-2016 IPR023214 HAD-like domain RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 Gene3D G3DSA:3.40.50.1000 494 608 7.8E-38 T 22-04-2016 IPR023214 HAD-like domain RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 PANTHER PTHR24093 38 368 2.2E-150 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 PANTHER PTHR24093 403 655 2.2E-150 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 336 342 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 Pfam PF00122 E1-E2 ATPase 107 325 2.4E-54 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 SUPERFAMILY SSF81665 236 328 6.02E-9 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 SUPERFAMILY SSF81665 86 139 6.02E-9 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 SUPERFAMILY SSF81665 620 646 6.02E-9 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 PANTHER PTHR24093:SF317 403 655 2.2E-150 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 SUPERFAMILY SSF56784 424 667 3.49E-44 T 22-04-2016 IPR023214 HAD-like domain RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 SUPERFAMILY SSF56784 333 352 3.49E-44 T 22-04-2016 IPR023214 HAD-like domain RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 185 199 4.0E-21 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 4.0E-21 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 486 497 4.0E-21 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 560 579 4.0E-21 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 518 4.0E-21 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 108 366 3.6E-36 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 403 645 4.3E-38 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 Pfam PF00702 haloacid dehalogenase-like hydrolase 331 573 4.6E-37 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 PANTHER PTHR24093:SF317 38 368 2.2E-150 T 22-04-2016 RM25_RS10365 826f379b478ee9fbf19bd4de6fad597b 671 Gene3D G3DSA:3.40.1110.10 337 377 8.9E-5 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RM25_RS05235 04ceeb402d7e73c9926faa48c9984d3a 343 Pfam PF02153 Prephenate dehydrogenase 18 247 9.0E-42 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 RM25_RS05235 04ceeb402d7e73c9926faa48c9984d3a 343 Gene3D G3DSA:3.40.50.720 2 165 2.1E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS05235 04ceeb402d7e73c9926faa48c9984d3a 343 SUPERFAMILY SSF48179 159 256 1.25E-22 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RM25_RS05235 04ceeb402d7e73c9926faa48c9984d3a 343 PANTHER PTHR21363:SF0 2 343 1.1E-41 T 22-04-2016 RM25_RS05235 04ceeb402d7e73c9926faa48c9984d3a 343 PANTHER PTHR21363 2 343 1.1E-41 T 22-04-2016 RM25_RS05235 04ceeb402d7e73c9926faa48c9984d3a 343 SUPERFAMILY SSF55021 275 334 7.55E-6 T 22-04-2016 RM25_RS05235 04ceeb402d7e73c9926faa48c9984d3a 343 SUPERFAMILY SSF51735 1 155 2.21E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS05235 04ceeb402d7e73c9926faa48c9984d3a 343 Gene3D G3DSA:3.30.70.260 276 331 2.3E-4 T 22-04-2016 RM25_RS07060 b1ab08495bc71eedd0d8b4e0dd91bc95 262 Gene3D G3DSA:3.20.20.70 3 258 1.9E-104 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS07060 b1ab08495bc71eedd0d8b4e0dd91bc95 262 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 248 1.1E-53 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RM25_RS07060 b1ab08495bc71eedd0d8b4e0dd91bc95 262 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 257 40.134 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RM25_RS07060 b1ab08495bc71eedd0d8b4e0dd91bc95 262 ProSitePatterns PS00171 Triosephosphate isomerase active site. 172 182 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RM25_RS07060 b1ab08495bc71eedd0d8b4e0dd91bc95 262 Pfam PF00121 Triosephosphate isomerase 6 254 8.8E-86 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RM25_RS07060 b1ab08495bc71eedd0d8b4e0dd91bc95 262 PANTHER PTHR21139 1 262 1.2E-112 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RM25_RS07060 b1ab08495bc71eedd0d8b4e0dd91bc95 262 SUPERFAMILY SSF51351 1 257 2.09E-91 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RM25_RS11400 bee2b76e271c6d8d015b9ef6df601b40 593 PANTHER PTHR10357 493 545 8.3E-142 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 RM25_RS11400 bee2b76e271c6d8d015b9ef6df601b40 593 PANTHER PTHR10357 30 459 8.3E-142 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 RM25_RS11400 bee2b76e271c6d8d015b9ef6df601b40 593 PANTHER PTHR10357:SF11 493 545 8.3E-142 T 22-04-2016 RM25_RS11400 bee2b76e271c6d8d015b9ef6df601b40 593 PANTHER PTHR10357:SF11 30 459 8.3E-142 T 22-04-2016 RM25_RS11400 bee2b76e271c6d8d015b9ef6df601b40 593 Pfam PF00128 Alpha amylase, catalytic domain 58 427 4.0E-72 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS11400 bee2b76e271c6d8d015b9ef6df601b40 593 SUPERFAMILY SSF51445 32 512 5.85E-118 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS11400 bee2b76e271c6d8d015b9ef6df601b40 593 SMART SM00642 43 454 2.1E-108 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS11400 bee2b76e271c6d8d015b9ef6df601b40 593 Gene3D G3DSA:3.90.400.10 135 211 7.3E-27 T 22-04-2016 RM25_RS11400 bee2b76e271c6d8d015b9ef6df601b40 593 Gene3D G3DSA:3.20.20.80 31 134 2.2E-104 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS11400 bee2b76e271c6d8d015b9ef6df601b40 593 Gene3D G3DSA:3.20.20.80 212 511 2.2E-104 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS05895 e65a0fd0bb8a3a22c8444a86539d6a31 221 Pfam PF13794 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like 5 179 8.1E-31 T 22-04-2016 RM25_RS04395 d42dc802862412c7c2de93e83fdc093e 307 PANTHER PTHR14226 11 295 7.6E-27 T 22-04-2016 RM25_RS04395 d42dc802862412c7c2de93e83fdc093e 307 PANTHER PTHR14226:SF25 11 295 7.6E-27 T 22-04-2016 RM25_RS04395 d42dc802862412c7c2de93e83fdc093e 307 SUPERFAMILY SSF52151 11 256 2.88E-34 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RM25_RS04395 d42dc802862412c7c2de93e83fdc093e 307 Pfam PF01734 Patatin-like phospholipase 13 180 1.7E-13 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RM25_RS00875 50c620202b5c0f28739f6959bd80e7af 213 Pfam PF00929 Exonuclease 16 171 1.7E-26 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RM25_RS00875 50c620202b5c0f28739f6959bd80e7af 213 SMART SM00479 13 180 1.2E-31 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RM25_RS00875 50c620202b5c0f28739f6959bd80e7af 213 SUPERFAMILY SSF53098 14 177 3.8E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS00875 50c620202b5c0f28739f6959bd80e7af 213 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 14 172 1.4E-20 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS00875 50c620202b5c0f28739f6959bd80e7af 213 PANTHER PTHR30231 14 203 1.8E-47 T 22-04-2016 RM25_RS00875 50c620202b5c0f28739f6959bd80e7af 213 Gene3D G3DSA:3.30.420.10 14 176 1.4E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS07700 db8116564c8a23ccc6e7ece7be648d41 322 PANTHER PTHR10264 17 259 6.2E-59 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RM25_RS07700 db8116564c8a23ccc6e7ece7be648d41 322 PANTHER PTHR10264 282 297 6.2E-59 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RM25_RS07700 db8116564c8a23ccc6e7ece7be648d41 322 PANTHER PTHR10264:SF46 17 259 6.2E-59 T 22-04-2016 RM25_RS07700 db8116564c8a23ccc6e7ece7be648d41 322 PANTHER PTHR10264:SF46 282 297 6.2E-59 T 22-04-2016 RM25_RS07700 db8116564c8a23ccc6e7ece7be648d41 322 SMART SM00244 90 254 5.7E-11 T 22-04-2016 IPR001107 Band 7 domain RM25_RS07700 db8116564c8a23ccc6e7ece7be648d41 322 SUPERFAMILY SSF117892 126 256 1.2E-11 T 22-04-2016 IPR001107 Band 7 domain RM25_RS07700 db8116564c8a23ccc6e7ece7be648d41 322 Pfam PF01145 SPFH domain / Band 7 family 94 267 3.1E-22 T 22-04-2016 IPR001107 Band 7 domain RM25_RS02775 88ed537c70f6244c312ccf2ead91fd62 124 Gene3D G3DSA:1.10.8.50 1 72 4.3E-29 T 22-04-2016 RM25_RS02775 88ed537c70f6244c312ccf2ead91fd62 124 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.6E-49 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02775 88ed537c70f6244c312ccf2ead91fd62 124 Pfam PF00416 Ribosomal protein S13/S18 3 109 5.9E-29 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02775 88ed537c70f6244c312ccf2ead91fd62 124 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 27.469 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02775 88ed537c70f6244c312ccf2ead91fd62 124 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 RM25_RS02775 88ed537c70f6244c312ccf2ead91fd62 124 PANTHER PTHR10871 1 123 7.6E-65 T 22-04-2016 RM25_RS02775 88ed537c70f6244c312ccf2ead91fd62 124 PIRSF PIRSF002134 1 124 1.6E-42 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02775 88ed537c70f6244c312ccf2ead91fd62 124 SUPERFAMILY SSF46946 2 121 1.07E-43 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RM25_RS02775 88ed537c70f6244c312ccf2ead91fd62 124 Gene3D G3DSA:4.10.910.10 74 122 5.4E-23 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal RM25_RS05120 4891bf889f62e5599209da96f5da009b 364 Pfam PF01761 3-dehydroquinate synthase 63 325 1.4E-85 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RM25_RS05120 4891bf889f62e5599209da96f5da009b 364 SUPERFAMILY SSF56796 1 355 6.41E-91 T 22-04-2016 RM25_RS05120 4891bf889f62e5599209da96f5da009b 364 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 16 344 2.9E-96 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RM25_RS05120 4891bf889f62e5599209da96f5da009b 364 Gene3D G3DSA:3.40.50.1970 3 166 5.2E-48 T 22-04-2016 RM25_RS05120 4891bf889f62e5599209da96f5da009b 364 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 358 34.541 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RM25_RS05120 4891bf889f62e5599209da96f5da009b 364 Gene3D G3DSA:1.20.1090.10 169 356 6.3E-57 T 22-04-2016 RM25_RS05120 4891bf889f62e5599209da96f5da009b 364 PANTHER PTHR21090 1 355 6.1E-109 T 22-04-2016 RM25_RS05500 7a775b26447b55c5a0f2d8469695d838 261 PANTHER PTHR22769 122 229 2.1E-13 T 22-04-2016 RM25_RS05500 7a775b26447b55c5a0f2d8469695d838 261 PANTHER PTHR22769:SF24 122 229 2.1E-13 T 22-04-2016 RM25_RS05500 7a775b26447b55c5a0f2d8469695d838 261 SUPERFAMILY SSF55729 30 94 2.66E-10 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS05500 7a775b26447b55c5a0f2d8469695d838 261 SUPERFAMILY SSF55811 110 241 1.76E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS05500 7a775b26447b55c5a0f2d8469695d838 261 PRINTS PR00502 NUDIX hydrolase family signature 142 156 4.1E-6 T 22-04-2016 IPR020476 NUDIX hydrolase RM25_RS05500 7a775b26447b55c5a0f2d8469695d838 261 PRINTS PR00502 NUDIX hydrolase family signature 156 171 4.1E-6 T 22-04-2016 IPR020476 NUDIX hydrolase RM25_RS05500 7a775b26447b55c5a0f2d8469695d838 261 Gene3D G3DSA:3.90.79.10 109 237 4.8E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS05500 7a775b26447b55c5a0f2d8469695d838 261 Pfam PF00293 NUDIX domain 119 230 1.0E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RM25_RS05500 7a775b26447b55c5a0f2d8469695d838 261 Gene3D G3DSA:3.40.630.30 29 97 1.1E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS05500 7a775b26447b55c5a0f2d8469695d838 261 ProSitePatterns PS00893 Nudix box signature. 147 168 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RM25_RS04210 bdff0d4fa159e86da92239f4478130b9 435 PANTHER PTHR33498:SF1 45 434 3.4E-23 T 22-04-2016 RM25_RS04210 bdff0d4fa159e86da92239f4478130b9 435 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 88 1.1E-6 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS04210 bdff0d4fa159e86da92239f4478130b9 435 Pfam PF01610 Transposase 164 419 1.1E-62 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS04210 bdff0d4fa159e86da92239f4478130b9 435 PANTHER PTHR33498 45 434 3.4E-23 T 22-04-2016 RM25_RS06545 1719732ba8eaf26a1fb008de88bfea7b 219 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 160 2.0E-57 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RM25_RS06545 1719732ba8eaf26a1fb008de88bfea7b 219 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 65 4.2E-28 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RM25_RS06545 1719732ba8eaf26a1fb008de88bfea7b 219 ProSitePatterns PS00938 Initiation factor 3 signature. 48 61 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 RM25_RS06545 1719732ba8eaf26a1fb008de88bfea7b 219 SUPERFAMILY SSF54364 1 68 1.7E-25 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RM25_RS06545 1719732ba8eaf26a1fb008de88bfea7b 219 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 74 157 6.5E-34 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RM25_RS06545 1719732ba8eaf26a1fb008de88bfea7b 219 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 160 26.809 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RM25_RS06545 1719732ba8eaf26a1fb008de88bfea7b 219 Gene3D G3DSA:3.30.110.10 69 161 1.1E-36 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RM25_RS06545 1719732ba8eaf26a1fb008de88bfea7b 219 PANTHER PTHR10938 1 196 2.2E-63 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RM25_RS06545 1719732ba8eaf26a1fb008de88bfea7b 219 Gene3D G3DSA:3.10.20.80 1 67 4.0E-31 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RM25_RS06545 1719732ba8eaf26a1fb008de88bfea7b 219 SUPERFAMILY SSF55200 75 158 6.41E-31 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RM25_RS10030 d8cea670a2e0e2e52bfcac207a9948cb 262 Gene3D G3DSA:1.10.3720.10 5 257 3.9E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10030 d8cea670a2e0e2e52bfcac207a9948cb 262 PANTHER PTHR30406:SF1 1 255 1.7E-89 T 22-04-2016 RM25_RS10030 d8cea670a2e0e2e52bfcac207a9948cb 262 PANTHER PTHR30406 1 255 1.7E-89 T 22-04-2016 RM25_RS10030 d8cea670a2e0e2e52bfcac207a9948cb 262 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 7 256 5.6E-85 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RM25_RS10030 d8cea670a2e0e2e52bfcac207a9948cb 262 SUPERFAMILY SSF161098 2 254 4.58E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10030 d8cea670a2e0e2e52bfcac207a9948cb 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 258 5.7E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS04200 4c73e57da62caababb458c4d0abd5648 141 SUPERFAMILY SSF52540 3 140 2.28E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04200 4c73e57da62caababb458c4d0abd5648 141 Gene3D G3DSA:3.40.50.300 3 140 5.9E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04200 4c73e57da62caababb458c4d0abd5648 141 PANTHER PTHR40453:SF1 2 141 7.3E-25 T 22-04-2016 RM25_RS04200 4c73e57da62caababb458c4d0abd5648 141 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 140 2.1E-44 T 22-04-2016 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 RM25_RS04200 4c73e57da62caababb458c4d0abd5648 141 PANTHER PTHR40453 2 141 7.3E-25 T 22-04-2016 RM25_RS04200 4c73e57da62caababb458c4d0abd5648 141 PIRSF PIRSF036409 1 141 1.1E-40 T 22-04-2016 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 RM25_RS06415 98671e214a04336965319ab4fc1b48f8 220 Pfam PF00293 NUDIX domain 48 168 9.1E-11 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RM25_RS06415 98671e214a04336965319ab4fc1b48f8 220 SUPERFAMILY SSF55811 10 186 5.26E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS06415 98671e214a04336965319ab4fc1b48f8 220 Gene3D G3DSA:3.90.79.10 10 186 4.3E-42 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS06415 98671e214a04336965319ab4fc1b48f8 220 PANTHER PTHR11839:SF9 9 206 6.3E-59 T 22-04-2016 RM25_RS06415 98671e214a04336965319ab4fc1b48f8 220 PANTHER PTHR11839 9 206 6.3E-59 T 22-04-2016 RM25_RS08795 2a76ecc083246447c4e69b108de05439 161 SMART SM01058 2 113 5.2E-30 T 22-04-2016 IPR003711 CarD-like/TRCF domain RM25_RS08795 2a76ecc083246447c4e69b108de05439 161 Pfam PF02559 CarD-like/TRCF domain 3 111 3.9E-13 T 22-04-2016 IPR003711 CarD-like/TRCF domain RM25_RS08795 2a76ecc083246447c4e69b108de05439 161 PANTHER PTHR38447 1 161 1.2E-56 T 22-04-2016 RM25_RS08795 2a76ecc083246447c4e69b108de05439 161 SUPERFAMILY SSF141259 2 67 3.27E-12 T 22-04-2016 IPR003711 CarD-like/TRCF domain RM25_RS11795 847c05e25414999263f1ce8baf59574a 206 Pfam PF13508 Acetyltransferase (GNAT) domain 96 183 1.0E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS11795 847c05e25414999263f1ce8baf59574a 206 PANTHER PTHR21471 1 182 5.4E-15 T 22-04-2016 RM25_RS11795 847c05e25414999263f1ce8baf59574a 206 Gene3D G3DSA:3.40.630.30 1 202 4.0E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS11795 847c05e25414999263f1ce8baf59574a 206 SUPERFAMILY SSF55729 119 188 3.9E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS11795 847c05e25414999263f1ce8baf59574a 206 SUPERFAMILY SSF55729 1 84 3.9E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS10150 8073ab949234249d94fc2648d49b2b22 239 Gene3D G3DSA:1.20.950.20 3 217 5.6E-74 T 22-04-2016 RM25_RS10150 8073ab949234249d94fc2648d49b2b22 239 PANTHER PTHR30598:SF3 1 227 2.4E-102 T 22-04-2016 RM25_RS10150 8073ab949234249d94fc2648d49b2b22 239 SUPERFAMILY SSF103501 1 226 3.14E-65 T 22-04-2016 IPR023234 NarG-like domain RM25_RS10150 8073ab949234249d94fc2648d49b2b22 239 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 2 227 1.8E-59 T 22-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 RM25_RS10150 8073ab949234249d94fc2648d49b2b22 239 Pfam PF02665 Nitrate reductase gamma subunit 6 226 1.3E-83 T 22-04-2016 IPR023234 NarG-like domain RM25_RS10150 8073ab949234249d94fc2648d49b2b22 239 PANTHER PTHR30598 1 227 2.4E-102 T 22-04-2016 RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 Pfam PF00128 Alpha amylase, catalytic domain 73 425 4.1E-74 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 Gene3D G3DSA:3.90.400.10 150 217 5.1E-23 T 22-04-2016 RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 SUPERFAMILY SSF51445 60 503 1.92E-129 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 Pfam PF16657 Maltogenic Amylase, C-terminal domain 511 586 6.0E-10 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 Gene3D G3DSA:2.60.40.1180 511 588 1.5E-7 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 50 589 4.7E-253 T 22-04-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 SMART SM00642 58 447 6.2E-111 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 PANTHER PTHR10357 479 589 1.7E-240 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 PANTHER PTHR10357 47 441 1.7E-240 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 PANTHER PTHR10357:SF164 479 589 1.7E-240 T 22-04-2016 RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 PANTHER PTHR10357:SF164 47 441 1.7E-240 T 22-04-2016 RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 SUPERFAMILY SSF51011 511 588 2.4E-7 T 22-04-2016 RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 Gene3D G3DSA:3.20.20.80 482 496 2.2E-112 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 Gene3D G3DSA:3.20.20.80 225 450 2.2E-112 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS05485 fcb79aea8ec49d90cfa7b4d7a8669adb 601 Gene3D G3DSA:3.20.20.80 52 149 2.2E-112 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS02055 85e074b9dbc7149c9ba1285a66199e5d 257 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 8 243 7.9E-93 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RM25_RS02055 85e074b9dbc7149c9ba1285a66199e5d 257 SUPERFAMILY SSF53790 3 243 3.14E-75 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS02055 85e074b9dbc7149c9ba1285a66199e5d 257 PANTHER PTHR21091 6 239 1.7E-69 T 22-04-2016 RM25_RS02055 85e074b9dbc7149c9ba1285a66199e5d 257 Gene3D G3DSA:3.40.1010.10 7 123 4.3E-43 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RM25_RS02055 85e074b9dbc7149c9ba1285a66199e5d 257 PANTHER PTHR21091:SF16 6 239 1.7E-69 T 22-04-2016 RM25_RS02055 85e074b9dbc7149c9ba1285a66199e5d 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 221 5.8E-50 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS02055 85e074b9dbc7149c9ba1285a66199e5d 257 Gene3D G3DSA:3.30.950.10 124 243 1.8E-38 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RM25_RS03605 995e57f5ddaee50b0b1a726ef9cff6af 421 SUPERFAMILY SSF51735 281 377 2.04E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS03605 995e57f5ddaee50b0b1a726ef9cff6af 421 Gene3D G3DSA:3.40.50.1400 14 137 2.2E-26 T 22-04-2016 RM25_RS03605 995e57f5ddaee50b0b1a726ef9cff6af 421 Gene3D G3DSA:3.40.50.1400 147 268 7.6E-20 T 22-04-2016 RM25_RS03605 995e57f5ddaee50b0b1a726ef9cff6af 421 Pfam PF01903 CbiX 156 258 2.4E-17 T 22-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 RM25_RS03605 995e57f5ddaee50b0b1a726ef9cff6af 421 Pfam PF01903 CbiX 20 128 4.4E-17 T 22-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 RM25_RS03605 995e57f5ddaee50b0b1a726ef9cff6af 421 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 282 399 1.9E-23 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RM25_RS03605 995e57f5ddaee50b0b1a726ef9cff6af 421 SUPERFAMILY SSF53800 14 264 9.7E-35 T 22-04-2016 RM25_RS03605 995e57f5ddaee50b0b1a726ef9cff6af 421 Pfam PF13241 Putative NAD(P)-binding 282 388 5.0E-24 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RM25_RS03605 995e57f5ddaee50b0b1a726ef9cff6af 421 PANTHER PTHR33542:SF2 8 267 8.0E-37 T 22-04-2016 RM25_RS03605 995e57f5ddaee50b0b1a726ef9cff6af 421 Gene3D G3DSA:3.40.50.720 281 383 1.1E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS03605 995e57f5ddaee50b0b1a726ef9cff6af 421 PANTHER PTHR33542 8 267 8.0E-37 T 22-04-2016 RM25_RS11740 8840feea63ab0186f5d771fef1640f99 219 Gene3D G3DSA:3.30.450.20 35 117 2.4E-12 T 22-04-2016 RM25_RS11740 8840feea63ab0186f5d771fef1640f99 219 SUPERFAMILY SSF55785 35 117 6.11E-16 T 22-04-2016 IPR000014 PAS domain RM25_RS04360 1149a4e123c92d628c56636acf9fc3c1 280 SUPERFAMILY SSF54506 8 135 2.59E-28 T 22-04-2016 RM25_RS04360 1149a4e123c92d628c56636acf9fc3c1 280 Gene3D G3DSA:3.10.310.10 8 135 1.6E-34 T 22-04-2016 RM25_RS04360 1149a4e123c92d628c56636acf9fc3c1 280 Gene3D G3DSA:3.10.310.10 136 256 3.5E-33 T 22-04-2016 RM25_RS04360 1149a4e123c92d628c56636acf9fc3c1 280 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 8 272 5.8E-61 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS04360 1149a4e123c92d628c56636acf9fc3c1 280 PANTHER PTHR31689 8 278 1.1E-66 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS04360 1149a4e123c92d628c56636acf9fc3c1 280 SUPERFAMILY SSF54506 142 271 1.57E-30 T 22-04-2016 RM25_RS04360 1149a4e123c92d628c56636acf9fc3c1 280 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 76 90 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS04360 1149a4e123c92d628c56636acf9fc3c1 280 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 7 274 27.354 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS04360 1149a4e123c92d628c56636acf9fc3c1 280 Pfam PF01678 Diaminopimelate epimerase 9 124 3.5E-27 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS04360 1149a4e123c92d628c56636acf9fc3c1 280 Pfam PF01678 Diaminopimelate epimerase 153 266 1.1E-20 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RM25_RS10085 e4654a94dec11affbb62f1f322b0456a 506 PANTHER PTHR11632 1 471 2.2E-44 T 22-04-2016 RM25_RS10085 e4654a94dec11affbb62f1f322b0456a 506 Pfam PF00890 FAD binding domain 1 352 4.8E-33 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RM25_RS10085 e4654a94dec11affbb62f1f322b0456a 506 SUPERFAMILY SSF46977 407 497 8.9E-15 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RM25_RS10085 e4654a94dec11affbb62f1f322b0456a 506 Gene3D G3DSA:1.20.58.100 437 490 1.7E-9 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RM25_RS10085 e4654a94dec11affbb62f1f322b0456a 506 SUPERFAMILY SSF51905 1 218 1.84E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS10085 e4654a94dec11affbb62f1f322b0456a 506 SUPERFAMILY SSF51905 324 379 1.84E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS10085 e4654a94dec11affbb62f1f322b0456a 506 Pfam PF02910 Fumarate reductase flavoprotein C-term 443 496 2.1E-6 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RM25_RS10085 e4654a94dec11affbb62f1f322b0456a 506 Gene3D G3DSA:3.50.50.60 1 210 9.0E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS10085 e4654a94dec11affbb62f1f322b0456a 506 Gene3D G3DSA:3.50.50.60 316 376 9.0E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS04175 0f425cb431ed4e13d8f2415c4458686a 120 Pfam PF04343 Protein of unknown function, DUF488 5 114 2.3E-28 T 22-04-2016 IPR007438 Protein of unknown function DUF488 RM25_RS04175 0f425cb431ed4e13d8f2415c4458686a 120 PANTHER PTHR36849 1 120 5.7E-51 T 22-04-2016 RM25_RS04175 0f425cb431ed4e13d8f2415c4458686a 120 PANTHER PTHR36849:SF1 1 120 5.7E-51 T 22-04-2016 RM25_RS04835 fe1695a5fa8cc1f36abc4fbc60654655 231 Pfam PF03070 TENA/THI-4/PQQC family 38 222 1.6E-25 T 22-04-2016 IPR004305 Thiaminase-2/PQQC RM25_RS04835 fe1695a5fa8cc1f36abc4fbc60654655 231 PANTHER PTHR20858 24 190 1.4E-36 T 22-04-2016 RM25_RS04835 fe1695a5fa8cc1f36abc4fbc60654655 231 Gene3D G3DSA:1.20.910.10 19 223 2.3E-54 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RM25_RS04835 fe1695a5fa8cc1f36abc4fbc60654655 231 SUPERFAMILY SSF48613 19 221 2.82E-52 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RM25_RS06030 753876e107c36de7971c63c737d985ef 150 Pfam PF00011 Hsp20/alpha crystallin family 35 134 3.6E-23 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RM25_RS06030 753876e107c36de7971c63c737d985ef 150 PANTHER PTHR11527:SF118 10 142 4.5E-28 T 22-04-2016 RM25_RS06030 753876e107c36de7971c63c737d985ef 150 Gene3D G3DSA:2.60.40.790 5 136 3.3E-33 T 22-04-2016 IPR008978 HSP20-like chaperone RM25_RS06030 753876e107c36de7971c63c737d985ef 150 PANTHER PTHR11527 10 142 4.5E-28 T 22-04-2016 IPR031107 Small heat shock protein HSP20 RM25_RS06030 753876e107c36de7971c63c737d985ef 150 SUPERFAMILY SSF49764 15 135 3.0E-31 T 22-04-2016 IPR008978 HSP20-like chaperone RM25_RS03125 b5bf7200b695ff3be0b467031069823a 343 Pfam PF01032 FecCD transport family 64 342 7.0E-44 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RM25_RS03125 b5bf7200b695ff3be0b467031069823a 343 SUPERFAMILY SSF81345 22 342 1.07E-51 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RM25_RS03125 b5bf7200b695ff3be0b467031069823a 343 PANTHER PTHR30472:SF19 19 343 6.5E-109 T 22-04-2016 RM25_RS03125 b5bf7200b695ff3be0b467031069823a 343 PANTHER PTHR30472 19 343 6.5E-109 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RM25_RS03125 b5bf7200b695ff3be0b467031069823a 343 Gene3D G3DSA:1.10.3470.10 24 343 3.9E-46 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RM25_RS00310 9fa433a778eb477e57407ac5104e36c6 486 PANTHER PTHR10491:SF4 183 478 4.0E-70 T 22-04-2016 RM25_RS00310 9fa433a778eb477e57407ac5104e36c6 486 PANTHER PTHR10491 183 478 4.0E-70 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family RM25_RS00310 9fa433a778eb477e57407ac5104e36c6 486 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 11 179 1.0E-75 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RM25_RS00310 9fa433a778eb477e57407ac5104e36c6 486 Gene3D G3DSA:3.40.50.720 189 416 1.2E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00310 9fa433a778eb477e57407ac5104e36c6 486 SUPERFAMILY SSF51735 189 471 1.21E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00310 9fa433a778eb477e57407ac5104e36c6 486 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 14 179 1.5E-40 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RM25_RS00310 9fa433a778eb477e57407ac5104e36c6 486 SUPERFAMILY SSF51182 10 183 2.67E-51 T 22-04-2016 IPR011051 RmlC-like cupin domain RM25_RS00310 9fa433a778eb477e57407ac5104e36c6 486 Gene3D G3DSA:2.60.120.10 8 184 1.5E-50 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RM25_RS00310 9fa433a778eb477e57407ac5104e36c6 486 Pfam PF04321 RmlD substrate binding domain 191 472 4.3E-72 T 22-04-2016 IPR029903 RmlD-like substrate binding domain RM25_RS05475 13fbf2d80fe30b75de45b16085cfa31a 856 Gene3D G3DSA:3.40.50.2000 24 421 1.3E-85 T 22-04-2016 RM25_RS05475 13fbf2d80fe30b75de45b16085cfa31a 856 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 597 609 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 RM25_RS05475 13fbf2d80fe30b75de45b16085cfa31a 856 PANTHER PTHR11468:SF9 105 775 6.2E-235 T 22-04-2016 RM25_RS05475 13fbf2d80fe30b75de45b16085cfa31a 856 Gene3D G3DSA:3.40.50.2000 422 711 2.8E-82 T 22-04-2016 RM25_RS05475 13fbf2d80fe30b75de45b16085cfa31a 856 Pfam PF00343 Carbohydrate phosphorylase 128 175 2.4E-6 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 RM25_RS05475 13fbf2d80fe30b75de45b16085cfa31a 856 Pfam PF00343 Carbohydrate phosphorylase 307 619 1.7E-20 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 RM25_RS05475 13fbf2d80fe30b75de45b16085cfa31a 856 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 111 708 3.0E-232 T 22-04-2016 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 RM25_RS05475 13fbf2d80fe30b75de45b16085cfa31a 856 PANTHER PTHR11468 105 775 6.2E-235 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 RM25_RS05475 13fbf2d80fe30b75de45b16085cfa31a 856 PIRSF PIRSF000460 1 791 3.1E-249 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 RM25_RS05475 13fbf2d80fe30b75de45b16085cfa31a 856 SUPERFAMILY SSF53756 4 739 8.07E-196 T 22-04-2016 RM25_RS05475 13fbf2d80fe30b75de45b16085cfa31a 856 Pfam PF11897 Protein of unknown function (DUF3417) 13 123 1.3E-33 T 22-04-2016 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 RM25_RS03555 5567c33d79bc48b34aad4f0d87bbd82a 209 Gene3D G3DSA:3.90.950.10 2 204 7.6E-71 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RM25_RS03555 5567c33d79bc48b34aad4f0d87bbd82a 209 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 3 205 44.161 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RM25_RS03555 5567c33d79bc48b34aad4f0d87bbd82a 209 PANTHER PTHR11067:SF9 1 204 1.3E-55 T 22-04-2016 RM25_RS03555 5567c33d79bc48b34aad4f0d87bbd82a 209 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 199 5.6E-44 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RM25_RS03555 5567c33d79bc48b34aad4f0d87bbd82a 209 PANTHER PTHR11067 1 204 1.3E-55 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RM25_RS03555 5567c33d79bc48b34aad4f0d87bbd82a 209 Pfam PF01725 Ham1 family 5 200 5.4E-51 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RM25_RS03555 5567c33d79bc48b34aad4f0d87bbd82a 209 SUPERFAMILY SSF52972 3 203 1.78E-57 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RM25_RS08765 1fbcec25377d6c19d3fcd726786c091e 465 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RM25_RS08765 1fbcec25377d6c19d3fcd726786c091e 465 PANTHER PTHR11785 2 455 2.8E-198 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS08765 1fbcec25377d6c19d3fcd726786c091e 465 PIRSF PIRSF006060 2 464 6.7E-68 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS08765 1fbcec25377d6c19d3fcd726786c091e 465 Pfam PF00324 Amino acid permease 16 451 3.1E-100 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RM25_RS08765 1fbcec25377d6c19d3fcd726786c091e 465 PANTHER PTHR11785:SF25 2 455 2.8E-198 T 22-04-2016 RM25_RS05005 decc435f4dfe392938b116956fcf3918 241 Pfam PF00977 Histidine biosynthesis protein 7 231 1.2E-65 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 RM25_RS05005 decc435f4dfe392938b116956fcf3918 241 SUPERFAMILY SSF51366 5 238 1.95E-62 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RM25_RS05005 decc435f4dfe392938b116956fcf3918 241 PANTHER PTHR21235:SF15 4 241 3.1E-84 T 22-04-2016 RM25_RS05005 decc435f4dfe392938b116956fcf3918 241 TIGRFAM TIGR01919 hisA-trpF: bifunctional HisA/TrpF protein 4 241 1.5E-106 T 22-04-2016 IPR010188 Bifunctional HisA/TrpF GO:0000105|GO:0000162|GO:0003949|GO:0004640|GO:0005737 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 RM25_RS05005 decc435f4dfe392938b116956fcf3918 241 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 6 239 31.6 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 RM25_RS05005 decc435f4dfe392938b116956fcf3918 241 Gene3D G3DSA:3.20.20.70 6 239 2.6E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS05005 decc435f4dfe392938b116956fcf3918 241 PANTHER PTHR21235 4 241 3.1E-84 T 22-04-2016 RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 197 207 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 5 406 46.278 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 99 107 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 Pfam PF00483 Nucleotidyl transferase 10 277 5.5E-62 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 SUPERFAMILY SSF53448 3 281 3.52E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 SUPERFAMILY SSF53448 343 359 3.52E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 PANTHER PTHR22572:SF10 9 379 1.1E-139 T 22-04-2016 RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 14 33 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 SUPERFAMILY SSF51161 309 406 1.52E-15 T 22-04-2016 IPR011004 Trimeric LpxA-like RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 Gene3D G3DSA:3.90.550.10 11 288 1.3E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 Gene3D G3DSA:3.90.550.10 326 369 1.3E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 PANTHER PTHR22572 9 379 1.1E-139 T 22-04-2016 RM25_RS07575 eed709692236acd8e99610070b2a29f1 417 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 8 379 1.1E-138 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 RM25_RS04940 6c78db870d900d75b843b6e3bd496983 277 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 8 272 28.688 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS04940 6c78db870d900d75b843b6e3bd496983 277 Gene3D G3DSA:3.20.20.70 2 275 6.0E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS04940 6c78db870d900d75b843b6e3bd496983 277 Pfam PF00290 Tryptophan synthase alpha chain 3 259 1.0E-58 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS04940 6c78db870d900d75b843b6e3bd496983 277 SUPERFAMILY SSF51366 2 260 3.48E-63 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RM25_RS04940 6c78db870d900d75b843b6e3bd496983 277 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 5 266 1.9E-50 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS04940 6c78db870d900d75b843b6e3bd496983 277 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 46 59 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS11560 a331113f4c7ce4aef3c37efa7b09f286 217 PANTHER PTHR23029:SF1 6 161 1.1E-16 T 22-04-2016 RM25_RS11560 a331113f4c7ce4aef3c37efa7b09f286 217 PANTHER PTHR23029 6 161 1.1E-16 T 22-04-2016 RM25_RS11560 a331113f4c7ce4aef3c37efa7b09f286 217 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 183 6.1E-19 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS11560 a331113f4c7ce4aef3c37efa7b09f286 217 Gene3D G3DSA:3.40.50.1240 6 183 5.6E-22 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS11560 a331113f4c7ce4aef3c37efa7b09f286 217 SUPERFAMILY SSF53254 6 211 9.29E-25 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS00745 26c12b38a281ef6b1bdf30cf5db6abaf 165 Gene3D G3DSA:3.40.30.10 3 165 2.3E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS00745 26c12b38a281ef6b1bdf30cf5db6abaf 165 Pfam PF08534 Redoxin 20 160 2.9E-24 T 22-04-2016 IPR013740 Redoxin GO:0016491 RM25_RS00745 26c12b38a281ef6b1bdf30cf5db6abaf 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 RM25_RS00745 26c12b38a281ef6b1bdf30cf5db6abaf 165 PANTHER PTHR10681 6 165 1.4E-48 T 22-04-2016 RM25_RS00745 26c12b38a281ef6b1bdf30cf5db6abaf 165 SUPERFAMILY SSF52833 1 162 5.49E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS00745 26c12b38a281ef6b1bdf30cf5db6abaf 165 PANTHER PTHR10681:SF81 6 165 1.4E-48 T 22-04-2016 RM25_RS00745 26c12b38a281ef6b1bdf30cf5db6abaf 165 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 165 37.558 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 RM25_RS11435 479e8f8707e6a4b80eeaabe7b4ebd023 650 Gene3D G3DSA:1.10.510.10 379 409 3.5E-6 T 22-04-2016 RM25_RS11435 479e8f8707e6a4b80eeaabe7b4ebd023 650 Pfam PF01636 Phosphotransferase enzyme family 350 407 1.3E-6 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RM25_RS11435 479e8f8707e6a4b80eeaabe7b4ebd023 650 SMART SM00220 218 491 0.0091 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RM25_RS11435 479e8f8707e6a4b80eeaabe7b4ebd023 650 PANTHER PTHR10566 111 647 9.5E-110 T 22-04-2016 RM25_RS11435 479e8f8707e6a4b80eeaabe7b4ebd023 650 SUPERFAMILY SSF56112 287 408 6.61E-24 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS11435 479e8f8707e6a4b80eeaabe7b4ebd023 650 SUPERFAMILY SSF56112 191 252 6.61E-24 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS11435 479e8f8707e6a4b80eeaabe7b4ebd023 650 Pfam PF03109 ABC1 family 207 324 6.4E-29 T 22-04-2016 IPR004147 UbiB domain RM25_RS11435 479e8f8707e6a4b80eeaabe7b4ebd023 650 PANTHER PTHR10566:SF10 111 647 9.5E-110 T 22-04-2016 RM25_RS11435 479e8f8707e6a4b80eeaabe7b4ebd023 650 Gene3D G3DSA:3.30.200.20 294 378 4.4E-4 T 22-04-2016 RM25_RS04435 c9367f9a3408c8e5883607b6e16c223c 291 Pfam PF13622 Thioesterase-like superfamily 29 281 1.5E-52 T 22-04-2016 RM25_RS04435 c9367f9a3408c8e5883607b6e16c223c 291 PANTHER PTHR11066 6 288 7.5E-84 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 RM25_RS04435 c9367f9a3408c8e5883607b6e16c223c 291 SUPERFAMILY SSF54637 4 114 1.49E-36 T 22-04-2016 IPR029069 HotDog domain RM25_RS04435 c9367f9a3408c8e5883607b6e16c223c 291 Gene3D G3DSA:3.10.129.10 5 115 1.3E-40 T 22-04-2016 IPR029069 HotDog domain RM25_RS04435 c9367f9a3408c8e5883607b6e16c223c 291 SUPERFAMILY SSF54637 117 282 3.09E-37 T 22-04-2016 IPR029069 HotDog domain RM25_RS04435 c9367f9a3408c8e5883607b6e16c223c 291 Gene3D G3DSA:3.10.129.10 125 284 4.1E-44 T 22-04-2016 IPR029069 HotDog domain RM25_RS02695 405c559a6082011f0eb6f291ae768067 203 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 186 34.162 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RM25_RS02695 405c559a6082011f0eb6f291ae768067 203 ProSitePatterns PS00585 Ribosomal protein S5 signature. 51 83 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site RM25_RS02695 405c559a6082011f0eb6f291ae768067 203 SUPERFAMILY SSF54211 102 182 1.95E-24 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS02695 405c559a6082011f0eb6f291ae768067 203 SUPERFAMILY SSF54768 30 99 4.29E-22 T 22-04-2016 RM25_RS02695 405c559a6082011f0eb6f291ae768067 203 Gene3D G3DSA:3.30.160.20 32 95 3.5E-29 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RM25_RS02695 405c559a6082011f0eb6f291ae768067 203 Pfam PF00333 Ribosomal protein S5, N-terminal domain 36 98 3.2E-27 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 RM25_RS02695 405c559a6082011f0eb6f291ae768067 203 Pfam PF03719 Ribosomal protein S5, C-terminal domain 110 180 5.4E-28 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 RM25_RS02695 405c559a6082011f0eb6f291ae768067 203 PANTHER PTHR13718 26 187 7.6E-69 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 RM25_RS02695 405c559a6082011f0eb6f291ae768067 203 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 32 185 1.4E-67 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RM25_RS02695 405c559a6082011f0eb6f291ae768067 203 Gene3D G3DSA:3.30.230.10 99 182 2.0E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 PANTHER PTHR11735 5 351 5.7E-125 T 22-04-2016 RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 Gene3D G3DSA:3.30.420.40 5 167 4.9E-42 T 22-04-2016 RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 ProSitePatterns PS01016 Glycoprotease family signature. 98 118 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 PANTHER PTHR11735:SF6 5 351 5.7E-125 T 22-04-2016 RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 329 2.1E-122 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 Pfam PF00814 Glycoprotease family 26 322 3.9E-91 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 78 98 7.7E-34 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 279 288 7.7E-34 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 7.7E-34 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 163 184 7.7E-34 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 7 322 2.1E-96 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 4 348 61.389 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RM25_RS02935 ef23a36602b0dc2d6ba3dcde1fd0a694 357 SUPERFAMILY SSF53067 5 323 7.77E-38 T 22-04-2016 RM25_RS00195 a40d69715acaed15b73e7e8034b56692 444 SUPERFAMILY SSF103473 8 428 2.22E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS00195 a40d69715acaed15b73e7e8034b56692 444 Pfam PF00083 Sugar (and other) transporter 25 428 3.9E-35 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RM25_RS00195 a40d69715acaed15b73e7e8034b56692 444 ProSitePatterns PS00217 Sugar transport proteins signature 2. 129 154 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS00195 a40d69715acaed15b73e7e8034b56692 444 Gene3D G3DSA:1.20.1250.20 228 424 6.7E-21 T 22-04-2016 RM25_RS00195 a40d69715acaed15b73e7e8034b56692 444 Gene3D G3DSA:1.20.1250.20 18 225 6.9E-26 T 22-04-2016 RM25_RS00195 a40d69715acaed15b73e7e8034b56692 444 PANTHER PTHR23508 18 443 4.8E-123 T 22-04-2016 RM25_RS03035 80133b10481966986864558eb0cbb600 308 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 302 1.3E-124 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RM25_RS03035 80133b10481966986864558eb0cbb600 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RM25_RS03035 80133b10481966986864558eb0cbb600 308 Gene3D G3DSA:3.40.50.1100 1 40 7.1E-76 T 22-04-2016 RM25_RS03035 80133b10481966986864558eb0cbb600 308 Gene3D G3DSA:3.40.50.1100 147 303 7.1E-76 T 22-04-2016 RM25_RS03035 80133b10481966986864558eb0cbb600 308 Gene3D G3DSA:3.40.50.1100 41 141 4.4E-37 T 22-04-2016 RM25_RS03035 80133b10481966986864558eb0cbb600 308 PANTHER PTHR10314 2 307 2.4E-147 T 22-04-2016 RM25_RS03035 80133b10481966986864558eb0cbb600 308 PANTHER PTHR10314:SF110 2 307 2.4E-147 T 22-04-2016 RM25_RS03035 80133b10481966986864558eb0cbb600 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 291 6.2E-64 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS03035 80133b10481966986864558eb0cbb600 308 SUPERFAMILY SSF53686 1 303 1.31E-94 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS03035 80133b10481966986864558eb0cbb600 308 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 302 2.4E-126 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 Gene3D G3DSA:3.30.1490.20 172 234 1.5E-22 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 PANTHER PTHR23132:SF8 9 371 6.3E-137 T 22-04-2016 RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 309 337 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 Gene3D G3DSA:3.30.470.20 236 369 5.1E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 PIRSF PIRSF039102 7 373 1.8E-112 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 Pfam PF07478 D-ala D-ala ligase C-terminus 156 363 7.4E-71 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 SUPERFAMILY SSF52440 9 147 1.25E-30 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 Pfam PF01820 D-ala D-ala ligase N-terminus 10 138 3.4E-29 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 9 367 39.305 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 SUPERFAMILY SSF56059 148 368 7.07E-56 T 22-04-2016 RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 PANTHER PTHR23132 9 371 6.3E-137 T 22-04-2016 RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 11 366 2.5E-100 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS04270 686c0538d6ba38f3399232fe5e0a66eb 375 Gene3D G3DSA:3.40.50.20 9 137 4.8E-29 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RM25_RS10915 de74c919993397a26d5106e1a7339c7c 288 PANTHER PTHR12110:SF18 1 285 1.3E-70 T 22-04-2016 RM25_RS10915 de74c919993397a26d5106e1a7339c7c 288 Gene3D G3DSA:3.20.20.150 5 284 4.0E-47 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS10915 de74c919993397a26d5106e1a7339c7c 288 SUPERFAMILY SSF51658 9 280 1.11E-47 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS10915 de74c919993397a26d5106e1a7339c7c 288 Pfam PF01261 Xylose isomerase-like TIM barrel 23 242 3.9E-27 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS10915 de74c919993397a26d5106e1a7339c7c 288 PANTHER PTHR12110 1 285 1.3E-70 T 22-04-2016 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 Gene3D G3DSA:3.20.20.300 2 283 4.0E-88 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 47 279 1.0E-46 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 SUPERFAMILY SSF52279 310 555 4.97E-47 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 Pfam PF14310 Fibronectin type III-like domain 585 655 9.0E-16 T 22-04-2016 IPR026891 Fibronectin type III-like domain RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 SUPERFAMILY SSF51445 2 308 9.05E-79 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 PRINTS PR00133 Glycosyl hydrolase family 3 signature 141 157 4.2E-31 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 PRINTS PR00133 Glycosyl hydrolase family 3 signature 211 229 4.2E-31 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 PRINTS PR00133 Glycosyl hydrolase family 3 signature 110 126 4.2E-31 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 PRINTS PR00133 Glycosyl hydrolase family 3 signature 27 43 4.2E-31 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 PRINTS PR00133 Glycosyl hydrolase family 3 signature 64 83 4.2E-31 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 PANTHER PTHR30620 1 669 2.2E-242 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 310 552 4.6E-48 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 PANTHER PTHR30620:SF18 1 669 2.2E-242 T 22-04-2016 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 211 228 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 SMART SM01217 585 655 1.4E-17 T 22-04-2016 IPR026891 Fibronectin type III-like domain RM25_RS01220 1fefbc231da50b93822c46d45d6e29c2 749 Gene3D G3DSA:3.40.50.1700 297 555 8.8E-62 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 RM25_RS08090 c22f500228474ac9b9f67989b03e158b 318 SUPERFAMILY SSF53067 129 307 1.91E-33 T 22-04-2016 RM25_RS08090 c22f500228474ac9b9f67989b03e158b 318 Pfam PF02541 Ppx/GppA phosphatase family 36 307 1.2E-53 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 RM25_RS08090 c22f500228474ac9b9f67989b03e158b 318 SUPERFAMILY SSF53067 2 123 2.88E-31 T 22-04-2016 RM25_RS08090 c22f500228474ac9b9f67989b03e158b 318 PANTHER PTHR30005 1 307 3.9E-94 T 22-04-2016 RM25_RS08090 c22f500228474ac9b9f67989b03e158b 318 Gene3D G3DSA:3.30.420.40 1 122 4.2E-42 T 22-04-2016 RM25_RS08090 c22f500228474ac9b9f67989b03e158b 318 Gene3D G3DSA:3.30.420.150 127 307 3.3E-52 T 22-04-2016 RM25_RS08090 c22f500228474ac9b9f67989b03e158b 318 PANTHER PTHR30005:SF1 1 307 3.9E-94 T 22-04-2016 RM25_RS09145 239f5219ff1bc8bbd3d8d432d4c4a683 232 Gene3D G3DSA:3.90.79.10 42 202 1.4E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS09145 239f5219ff1bc8bbd3d8d432d4c4a683 232 SUPERFAMILY SSF55811 50 200 2.44E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS09145 239f5219ff1bc8bbd3d8d432d4c4a683 232 Pfam PF00293 NUDIX domain 49 161 8.7E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RM25_RS09145 239f5219ff1bc8bbd3d8d432d4c4a683 232 ProSitePatterns PS01293 Nudix CoA signature. 64 84 - T 22-04-2016 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 RM25_RS09145 239f5219ff1bc8bbd3d8d432d4c4a683 232 PANTHER PTHR12992 38 216 1.1E-42 T 22-04-2016 RM25_RS07310 3b7e36b8297ed4e2d312db8951620817 1181 Pfam PF02811 PHP domain 6 176 7.4E-15 T 22-04-2016 IPR004013 PHP domain GO:0003824 RM25_RS07310 3b7e36b8297ed4e2d312db8951620817 1181 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 320 728 4.4E-120 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07310 3b7e36b8297ed4e2d312db8951620817 1181 Pfam PF14579 Helix-hairpin-helix motif 817 910 1.7E-10 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07310 3b7e36b8297ed4e2d312db8951620817 1181 PANTHER PTHR32294:SF4 1 838 0.0 T 22-04-2016 RM25_RS07310 3b7e36b8297ed4e2d312db8951620817 1181 PANTHER PTHR32294:SF4 854 1176 0.0 T 22-04-2016 RM25_RS07310 3b7e36b8297ed4e2d312db8951620817 1181 Gene3D G3DSA:3.20.20.140 11 69 5.1E-5 T 22-04-2016 RM25_RS07310 3b7e36b8297ed4e2d312db8951620817 1181 SMART SM00481 5 72 9.8E-15 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RM25_RS07310 3b7e36b8297ed4e2d312db8951620817 1181 PANTHER PTHR32294 1 838 0.0 T 22-04-2016 RM25_RS07310 3b7e36b8297ed4e2d312db8951620817 1181 PANTHER PTHR32294 854 1176 0.0 T 22-04-2016 RM25_RS07310 3b7e36b8297ed4e2d312db8951620817 1181 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 1059 2.8E-164 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS04725 b4a7a0d1f6a85fadb25a5f0a41e0c04a 476 Pfam PF03631 Virulence factor BrkB 54 313 3.2E-30 T 22-04-2016 IPR017039 Virulence factor BrkB RM25_RS04725 b4a7a0d1f6a85fadb25a5f0a41e0c04a 476 PANTHER PTHR30213:SF1 11 337 4.4E-36 T 22-04-2016 RM25_RS04725 b4a7a0d1f6a85fadb25a5f0a41e0c04a 476 PANTHER PTHR30213 11 337 4.4E-36 T 22-04-2016 RM25_RS06920 eaba31aa6fdcb59268e53311ce390f8f 269 Pfam PF00588 SpoU rRNA Methylase family 120 265 3.9E-32 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RM25_RS06920 eaba31aa6fdcb59268e53311ce390f8f 269 Gene3D G3DSA:3.30.1330.30 6 105 4.8E-17 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RM25_RS06920 eaba31aa6fdcb59268e53311ce390f8f 269 PANTHER PTHR12029 1 268 1.4E-90 T 22-04-2016 RM25_RS06920 eaba31aa6fdcb59268e53311ce390f8f 269 SUPERFAMILY SSF75217 99 268 4.12E-40 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RM25_RS06920 eaba31aa6fdcb59268e53311ce390f8f 269 SUPERFAMILY SSF55315 6 105 1.01E-17 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RM25_RS06920 eaba31aa6fdcb59268e53311ce390f8f 269 Gene3D G3DSA:3.40.1280.10 118 268 6.0E-50 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RM25_RS06920 eaba31aa6fdcb59268e53311ce390f8f 269 PANTHER PTHR12029:SF52 1 268 1.4E-90 T 22-04-2016 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 PANTHER PTHR28570 1 420 7.6E-140 T 22-04-2016 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 Gene3D G3DSA:3.40.630.10 9 89 1.6E-99 T 22-04-2016 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 Gene3D G3DSA:3.40.630.10 215 420 1.6E-99 T 22-04-2016 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 112 132 8.8E-35 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 255 273 8.8E-35 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 79 95 8.8E-35 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 387 402 8.8E-35 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 298 314 8.8E-35 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 SUPERFAMILY SSF101821 91 200 3.48E-24 T 22-04-2016 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 17 419 6.9E-106 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 SUPERFAMILY SSF53187 8 90 3.83E-91 T 22-04-2016 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 SUPERFAMILY SSF53187 206 420 3.83E-91 T 22-04-2016 RM25_RS07910 c7bef7133a898970afbfa5ad27393ce0 423 Gene3D G3DSA:2.30.250.10 90 212 2.0E-29 T 22-04-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 RM25_RS06995 234b11f994c79ccbd3e960f41a67cf62 485 PANTHER PTHR30508:SF1 15 485 8.0E-236 T 22-04-2016 RM25_RS06995 234b11f994c79ccbd3e960f41a67cf62 485 SUPERFAMILY SSF101960 51 482 1.83E-138 T 22-04-2016 RM25_RS06995 234b11f994c79ccbd3e960f41a67cf62 485 PANTHER PTHR30508 15 485 8.0E-236 T 22-04-2016 RM25_RS06995 234b11f994c79ccbd3e960f41a67cf62 485 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 29 476 1.0E-218 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 RM25_RS06995 234b11f994c79ccbd3e960f41a67cf62 485 Pfam PF01458 Uncharacterized protein family (UPF0051) 231 456 1.0E-73 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 RM25_RS11790 b0fc174dfcfef82d5aa390810bfe1c6a 331 SUPERFAMILY SSF55729 6 150 1.18E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS11790 b0fc174dfcfef82d5aa390810bfe1c6a 331 PANTHER PTHR33540 153 298 5.8E-35 T 22-04-2016 RM25_RS11790 b0fc174dfcfef82d5aa390810bfe1c6a 331 SUPERFAMILY SSF52540 173 272 1.68E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11790 b0fc174dfcfef82d5aa390810bfe1c6a 331 Pfam PF00583 Acetyltransferase (GNAT) family 62 122 2.0E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS11790 b0fc174dfcfef82d5aa390810bfe1c6a 331 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 161 281 4.7E-22 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RM25_RS11790 b0fc174dfcfef82d5aa390810bfe1c6a 331 Gene3D G3DSA:3.40.630.30 5 141 4.9E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS11790 b0fc174dfcfef82d5aa390810bfe1c6a 331 Gene3D G3DSA:3.40.50.300 154 299 2.7E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11790 b0fc174dfcfef82d5aa390810bfe1c6a 331 PANTHER PTHR33540:SF2 153 298 5.8E-35 T 22-04-2016 RM25_RS11790 b0fc174dfcfef82d5aa390810bfe1c6a 331 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 159 279 1.7E-27 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RM25_RS05425 36ebcf7b01b387e9452736f71961018d 100 SUPERFAMILY SSF141000 3 93 8.11E-21 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RM25_RS05425 36ebcf7b01b387e9452736f71961018d 100 PANTHER PTHR15004 1 100 2.8E-16 T 22-04-2016 RM25_RS05425 36ebcf7b01b387e9452736f71961018d 100 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 6 95 1.2E-18 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RM25_RS05425 36ebcf7b01b387e9452736f71961018d 100 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 19.479 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RM25_RS05425 36ebcf7b01b387e9452736f71961018d 100 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.4E-11 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RM25_RS00500 62be2622d9c4cc2b113dddd573f5e3e9 265 PANTHER PTHR12110 1 261 2.0E-36 T 22-04-2016 RM25_RS00500 62be2622d9c4cc2b113dddd573f5e3e9 265 Gene3D G3DSA:3.20.20.150 7 261 1.4E-56 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS00500 62be2622d9c4cc2b113dddd573f5e3e9 265 Pfam PF01261 Xylose isomerase-like TIM barrel 47 222 1.8E-17 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS00500 62be2622d9c4cc2b113dddd573f5e3e9 265 SUPERFAMILY SSF51658 5 260 5.94E-52 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS00500 62be2622d9c4cc2b113dddd573f5e3e9 265 PIRSF PIRSF006241 4 262 1.0E-52 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RM25_RS08040 cbd78de22a588d301068cfce11b350f0 249 PANTHER PTHR10108:SF746 1 236 1.4E-61 T 22-04-2016 RM25_RS08040 cbd78de22a588d301068cfce11b350f0 249 Pfam PF08241 Methyltransferase domain 52 139 1.3E-7 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RM25_RS08040 cbd78de22a588d301068cfce11b350f0 249 PANTHER PTHR10108 1 236 1.4E-61 T 22-04-2016 RM25_RS08040 cbd78de22a588d301068cfce11b350f0 249 SUPERFAMILY SSF53335 36 199 5.87E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS08040 cbd78de22a588d301068cfce11b350f0 249 Gene3D G3DSA:3.40.50.150 39 232 6.6E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS11270 5e2f38a66d48b7afc0142662fbba66b0 306 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 15 300 3.8E-47 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RM25_RS11270 5e2f38a66d48b7afc0142662fbba66b0 306 PANTHER PTHR21708 10 300 2.1E-56 T 22-04-2016 RM25_RS11270 5e2f38a66d48b7afc0142662fbba66b0 306 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 180 300 2.3E-22 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RM25_RS11270 5e2f38a66d48b7afc0142662fbba66b0 306 Gene3D G3DSA:3.40.50.720 14 187 5.1E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS11270 5e2f38a66d48b7afc0142662fbba66b0 306 SUPERFAMILY SSF51735 15 146 7.9E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS11270 5e2f38a66d48b7afc0142662fbba66b0 306 Pfam PF02558 Ketopantoate reductase PanE/ApbA 16 157 2.7E-27 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RM25_RS11270 5e2f38a66d48b7afc0142662fbba66b0 306 Gene3D G3DSA:1.10.1040.10 188 300 1.6E-25 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RM25_RS11270 5e2f38a66d48b7afc0142662fbba66b0 306 PANTHER PTHR21708:SF27 10 300 2.1E-56 T 22-04-2016 RM25_RS11270 5e2f38a66d48b7afc0142662fbba66b0 306 SUPERFAMILY SSF48179 180 300 4.42E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 PANTHER PTHR11405 6 379 8.6E-186 T 22-04-2016 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 Gene3D G3DSA:3.40.50.880 154 373 6.0E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS05135 b20da10c2466d6367be94baf26272633 394 SMART SM01097 6 136 2.2E-84 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 PRINTS PR00096 Glutamine amidotransferase superfamily signature 252 263 7.4E-11 T 22-04-2016 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 PRINTS PR00096 Glutamine amidotransferase superfamily signature 346 359 7.4E-11 T 22-04-2016 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 PRINTS PR00096 Glutamine amidotransferase superfamily signature 224 233 7.4E-11 T 22-04-2016 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 Gene3D G3DSA:3.50.30.20 7 146 4.4E-57 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 252 268 6.8E-31 T 22-04-2016 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 182 196 6.8E-31 T 22-04-2016 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 221 235 6.8E-31 T 22-04-2016 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 294 305 6.8E-31 T 22-04-2016 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 269 286 6.8E-31 T 22-04-2016 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 SUPERFAMILY SSF52021 7 150 8.76E-55 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 SUPERFAMILY SSF52317 155 375 1.83E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS05135 b20da10c2466d6367be94baf26272633 394 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 134 8.3E-51 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 Pfam PF00117 Glutamine amidotransferase class-I 185 369 1.0E-31 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 372 2.4E-129 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS05135 b20da10c2466d6367be94baf26272633 394 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 375 43.242 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RM25_RS01250 527e65866b0aff0a34bac8aa7e93d237 147 PRINTS PR00502 NUDIX hydrolase family signature 54 69 1.5E-8 T 22-04-2016 IPR020476 NUDIX hydrolase RM25_RS01250 527e65866b0aff0a34bac8aa7e93d237 147 PRINTS PR00502 NUDIX hydrolase family signature 40 54 1.5E-8 T 22-04-2016 IPR020476 NUDIX hydrolase RM25_RS01250 527e65866b0aff0a34bac8aa7e93d237 147 PANTHER PTHR22769 6 127 1.3E-23 T 22-04-2016 RM25_RS01250 527e65866b0aff0a34bac8aa7e93d237 147 Gene3D G3DSA:3.90.79.10 14 130 1.2E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS01250 527e65866b0aff0a34bac8aa7e93d237 147 SUPERFAMILY SSF55811 9 133 2.03E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS01250 527e65866b0aff0a34bac8aa7e93d237 147 Pfam PF00293 NUDIX domain 14 121 1.1E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RM25_RS01250 527e65866b0aff0a34bac8aa7e93d237 147 ProSitePatterns PS00893 Nudix box signature. 45 66 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RM25_RS09940 7c3608b3050201a527efcedd2db42f56 140 Pfam PF12952 Domain of unknown function (DUF3841) 1 123 2.9E-14 T 22-04-2016 IPR024211 Protein of unknown function DUF3841 RM25_RS06055 2ce0eecff5007b66ff28b5f43911aa9d 404 PANTHER PTHR33744 82 397 1.5E-89 T 22-04-2016 RM25_RS06055 2ce0eecff5007b66ff28b5f43911aa9d 404 PANTHER PTHR33744:SF2 82 397 1.5E-89 T 22-04-2016 RM25_RS06055 2ce0eecff5007b66ff28b5f43911aa9d 404 Pfam PF13556 PucR C-terminal helix-turn-helix domain 330 386 4.6E-18 T 22-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 89 233 1.1E-20 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 237 440 1.5E-54 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 Gene3D G3DSA:3.40.710.10 238 454 1.7E-54 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 PANTHER PTHR30023:SF0 35 164 2.4E-51 T 22-04-2016 RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 PANTHER PTHR30023:SF0 181 449 2.4E-51 T 22-04-2016 RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 273 295 3.45E-22 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 410 423 3.45E-22 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 114 133 3.45E-22 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 3.45E-22 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 330 344 3.45E-22 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 SUPERFAMILY SSF56601 79 444 1.78E-59 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 PANTHER PTHR30023 35 164 2.4E-51 T 22-04-2016 RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 PANTHER PTHR30023 181 449 2.4E-51 T 22-04-2016 RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 237 433 1.8E-43 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RM25_RS09575 1ced7b03c7f820a8c8783f5f165c777a 456 Gene3D G3DSA:3.40.710.10 78 131 7.7E-5 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS02020 db1ed8210c6eb9fab27066ef5a501528 248 Pfam PF13398 Peptidase M50B-like 31 229 1.1E-40 T 22-04-2016 RM25_RS06050 1c6e5a9b106e3233bfc33a973ae545aa 398 PANTHER PTHR11879 1 395 2.2E-176 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RM25_RS06050 1c6e5a9b106e3233bfc33a973ae545aa 398 Pfam PF00155 Aminotransferase class I and II 29 392 2.9E-70 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RM25_RS06050 1c6e5a9b106e3233bfc33a973ae545aa 398 PRINTS PR00799 Aspartate aminotransferase signature 207 219 9.3E-31 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RM25_RS06050 1c6e5a9b106e3233bfc33a973ae545aa 398 PRINTS PR00799 Aspartate aminotransferase signature 176 195 9.3E-31 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RM25_RS06050 1c6e5a9b106e3233bfc33a973ae545aa 398 PRINTS PR00799 Aspartate aminotransferase signature 274 299 9.3E-31 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RM25_RS06050 1c6e5a9b106e3233bfc33a973ae545aa 398 PRINTS PR00799 Aspartate aminotransferase signature 341 359 9.3E-31 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RM25_RS06050 1c6e5a9b106e3233bfc33a973ae545aa 398 Gene3D G3DSA:3.40.640.10 48 316 2.0E-91 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS06050 1c6e5a9b106e3233bfc33a973ae545aa 398 SUPERFAMILY SSF53383 1 394 8.6E-103 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS06050 1c6e5a9b106e3233bfc33a973ae545aa 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RM25_RS03455 1d499f26a9ab736e18074760c7b13a8f 271 Pfam PF03332 Eukaryotic phosphomannomutase 129 253 4.9E-10 T 22-04-2016 IPR005002 Eukaryotic phosphomannomutase GO:0004615|GO:0005737|GO:0009298 KEGG: 00051+5.4.2.8|KEGG: 00520+5.4.2.8|MetaCyc: PWY-5659|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: REACT_17015|UniPathway: UPA00126 RM25_RS03455 1d499f26a9ab736e18074760c7b13a8f 271 Gene3D G3DSA:3.40.50.1000 185 233 1.1E-14 T 22-04-2016 IPR023214 HAD-like domain RM25_RS03455 1d499f26a9ab736e18074760c7b13a8f 271 Gene3D G3DSA:3.40.50.1000 12 87 1.1E-14 T 22-04-2016 IPR023214 HAD-like domain RM25_RS03455 1d499f26a9ab736e18074760c7b13a8f 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 233 2.9E-18 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 RM25_RS03455 1d499f26a9ab736e18074760c7b13a8f 271 SUPERFAMILY SSF56784 12 255 1.52E-34 T 22-04-2016 IPR023214 HAD-like domain RM25_RS08635 d6e7cc455372e7dd0b6fbaae0582ada5 186 PANTHER PTHR22769:SF14 22 155 2.7E-12 T 22-04-2016 RM25_RS08635 d6e7cc455372e7dd0b6fbaae0582ada5 186 Pfam PF00293 NUDIX domain 24 154 5.1E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RM25_RS08635 d6e7cc455372e7dd0b6fbaae0582ada5 186 ProSitePatterns PS00893 Nudix box signature. 58 79 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RM25_RS08635 d6e7cc455372e7dd0b6fbaae0582ada5 186 Gene3D G3DSA:3.90.79.10 21 156 2.1E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS08635 d6e7cc455372e7dd0b6fbaae0582ada5 186 PANTHER PTHR22769 22 155 2.7E-12 T 22-04-2016 RM25_RS08635 d6e7cc455372e7dd0b6fbaae0582ada5 186 SUPERFAMILY SSF55811 17 165 1.06E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS08635 d6e7cc455372e7dd0b6fbaae0582ada5 186 PRINTS PR00502 NUDIX hydrolase family signature 53 67 8.54E-8 T 22-04-2016 IPR020476 NUDIX hydrolase RM25_RS08635 d6e7cc455372e7dd0b6fbaae0582ada5 186 PRINTS PR00502 NUDIX hydrolase family signature 67 82 8.54E-8 T 22-04-2016 IPR020476 NUDIX hydrolase RM25_RS10850 bf2dff52b66b9a9cf7aaa47075889d38 462 Pfam PF04055 Radical SAM superfamily 26 190 9.8E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RM25_RS10850 bf2dff52b66b9a9cf7aaa47075889d38 462 PANTHER PTHR11228 29 351 2.4E-90 T 22-04-2016 RM25_RS10850 bf2dff52b66b9a9cf7aaa47075889d38 462 Pfam PF13186 Iron-sulfur cluster-binding domain 277 336 6.9E-7 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain RM25_RS10850 bf2dff52b66b9a9cf7aaa47075889d38 462 PANTHER PTHR11228:SF24 29 351 2.4E-90 T 22-04-2016 RM25_RS10850 bf2dff52b66b9a9cf7aaa47075889d38 462 Pfam PF13353 4Fe-4S single cluster domain 29 133 1.2E-5 T 22-04-2016 RM25_RS10850 bf2dff52b66b9a9cf7aaa47075889d38 462 SUPERFAMILY SSF102114 28 345 8.11E-45 T 22-04-2016 RM25_RS10850 bf2dff52b66b9a9cf7aaa47075889d38 462 Gene3D G3DSA:3.20.20.70 27 350 1.1E-41 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS10850 bf2dff52b66b9a9cf7aaa47075889d38 462 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 19 355 5.9E-118 T 22-04-2016 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 RM25_RS10850 bf2dff52b66b9a9cf7aaa47075889d38 462 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 276 353 1.7E-16 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain RM25_RS00030 bf4130e508ddf9a235b5fc5067d29f2d 311 Pfam PF00005 ABC transporter 73 219 2.3E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS00030 bf4130e508ddf9a235b5fc5067d29f2d 311 Gene3D G3DSA:3.40.50.300 57 273 1.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00030 bf4130e508ddf9a235b5fc5067d29f2d 311 PANTHER PTHR24220 55 285 2.2E-131 T 22-04-2016 RM25_RS00030 bf4130e508ddf9a235b5fc5067d29f2d 311 SMART SM00382 82 268 4.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS00030 bf4130e508ddf9a235b5fc5067d29f2d 311 SUPERFAMILY SSF52540 57 272 6.44E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00030 bf4130e508ddf9a235b5fc5067d29f2d 311 PANTHER PTHR24220:SF484 55 285 2.2E-131 T 22-04-2016 RM25_RS00580 2b8ec6064895b5a28ca8e0070a5072a3 303 PANTHER PTHR12110:SF21 33 302 1.2E-25 T 22-04-2016 RM25_RS00580 2b8ec6064895b5a28ca8e0070a5072a3 303 Gene3D G3DSA:3.20.20.150 33 301 1.8E-44 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS00580 2b8ec6064895b5a28ca8e0070a5072a3 303 PANTHER PTHR12110 33 302 1.2E-25 T 22-04-2016 RM25_RS00580 2b8ec6064895b5a28ca8e0070a5072a3 303 SUPERFAMILY SSF51658 31 299 3.4E-39 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS00580 2b8ec6064895b5a28ca8e0070a5072a3 303 Pfam PF01261 Xylose isomerase-like TIM barrel 37 236 1.4E-24 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS02080 d48d06b20ae8ae00b364244663f21094 254 SUPERFAMILY SSF48008 99 227 1.62E-20 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RM25_RS02080 d48d06b20ae8ae00b364244663f21094 254 Pfam PF07729 FCD domain 103 222 6.4E-20 T 22-04-2016 IPR011711 GntR, C-terminal RM25_RS02080 d48d06b20ae8ae00b364244663f21094 254 SMART SM00345 14 72 6.3E-4 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS02080 d48d06b20ae8ae00b364244663f21094 254 SMART SM00895 101 224 2.4E-15 T 22-04-2016 IPR011711 GntR, C-terminal RM25_RS02080 d48d06b20ae8ae00b364244663f21094 254 Gene3D G3DSA:1.10.10.10 6 69 4.2E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS02080 d48d06b20ae8ae00b364244663f21094 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 69 5.5E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS02080 d48d06b20ae8ae00b364244663f21094 254 SUPERFAMILY SSF46785 6 76 1.38E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS02080 d48d06b20ae8ae00b364244663f21094 254 Gene3D G3DSA:1.20.120.530 97 226 3.4E-20 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RM25_RS05150 38a69fb6b29ce59f806330b5d34aca5c 269 Gene3D G3DSA:3.20.20.70 7 265 5.5E-58 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS05150 38a69fb6b29ce59f806330b5d34aca5c 269 SMART SM00934 18 262 1.4E-27 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS05150 38a69fb6b29ce59f806330b5d34aca5c 269 PANTHER PTHR19278:SF1 4 26 3.3E-54 T 22-04-2016 RM25_RS05150 38a69fb6b29ce59f806330b5d34aca5c 269 PANTHER PTHR19278:SF1 42 233 3.3E-54 T 22-04-2016 RM25_RS05150 38a69fb6b29ce59f806330b5d34aca5c 269 SUPERFAMILY SSF51366 7 265 1.67E-57 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RM25_RS05150 38a69fb6b29ce59f806330b5d34aca5c 269 PANTHER PTHR19278 4 26 3.3E-54 T 22-04-2016 RM25_RS05150 38a69fb6b29ce59f806330b5d34aca5c 269 PANTHER PTHR19278 42 233 3.3E-54 T 22-04-2016 RM25_RS05150 38a69fb6b29ce59f806330b5d34aca5c 269 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 5 262 1.6E-77 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS05150 38a69fb6b29ce59f806330b5d34aca5c 269 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 18 261 9.3E-35 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS00995 4c4ceb718b88e59638dc612ac4fcdb29 271 Gene3D G3DSA:3.40.50.150 20 214 2.4E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS00995 4c4ceb718b88e59638dc612ac4fcdb29 271 SUPERFAMILY SSF53335 11 212 1.8E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS00995 4c4ceb718b88e59638dc612ac4fcdb29 271 Pfam PF08241 Methyltransferase domain 54 148 4.3E-8 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RM25_RS03525 b7ee62ad8ba8c46929c23cb46985e801 334 Pfam PF00378 Enoyl-CoA hydratase/isomerase 147 328 5.7E-38 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RM25_RS03525 b7ee62ad8ba8c46929c23cb46985e801 334 Pfam PF00378 Enoyl-CoA hydratase/isomerase 51 119 5.1E-8 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RM25_RS03525 b7ee62ad8ba8c46929c23cb46985e801 334 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 16 333 49.187 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 RM25_RS03525 b7ee62ad8ba8c46929c23cb46985e801 334 Gene3D G3DSA:3.90.226.10 50 266 7.4E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS03525 b7ee62ad8ba8c46929c23cb46985e801 334 SUPERFAMILY SSF52096 50 330 1.58E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS03525 b7ee62ad8ba8c46929c23cb46985e801 334 PANTHER PTHR11941 142 327 1.3E-114 T 22-04-2016 RM25_RS03525 b7ee62ad8ba8c46929c23cb46985e801 334 PANTHER PTHR11941 15 115 1.3E-114 T 22-04-2016 RM25_RS03525 b7ee62ad8ba8c46929c23cb46985e801 334 PANTHER PTHR11941:SF20 142 327 1.3E-114 T 22-04-2016 RM25_RS03525 b7ee62ad8ba8c46929c23cb46985e801 334 PANTHER PTHR11941:SF20 15 115 1.3E-114 T 22-04-2016 RM25_RS03525 b7ee62ad8ba8c46929c23cb46985e801 334 Gene3D G3DSA:1.10.12.10 273 321 9.1E-28 T 22-04-2016 IPR014748 Crontonase, C-terminal RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 SUPERFAMILY SSF52374 31 349 2.39E-85 T 22-04-2016 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 PANTHER PTHR11451:SF29 270 564 2.3E-185 T 22-04-2016 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 PANTHER PTHR11451:SF29 12 249 2.3E-185 T 22-04-2016 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 Gene3D G3DSA:2.40.240.10 471 554 8.5E-20 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 PRINTS PR00987 Glutamyl-tRNA synthetase signature 63 76 8.7E-6 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 46 8.7E-6 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 222 8.7E-6 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 Gene3D G3DSA:1.10.1160.10 265 342 1.8E-32 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 PANTHER PTHR11451 270 564 2.3E-185 T 22-04-2016 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 PANTHER PTHR11451 12 249 2.3E-185 T 22-04-2016 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 Gene3D G3DSA:3.90.800.10 103 210 4.4E-42 T 22-04-2016 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 343 539 1.5E-48 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 Gene3D G3DSA:2.40.240.10 351 470 5.8E-42 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 Gene3D G3DSA:3.40.50.620 214 264 1.2E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 Gene3D G3DSA:3.40.50.620 31 99 1.2E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 SUPERFAMILY SSF50715 343 554 2.04E-57 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 31 557 5.2E-190 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 RM25_RS04910 475c4fc1b25c33d268367f0d2ccda200 570 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 31 340 7.4E-95 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RM25_RS06240 906e89d4a54542f030ba9c8f807b9025 92 SMART SM00877 3 80 1.5E-33 T 22-04-2016 IPR000249 Microcompartment protein, bacteria RM25_RS06240 906e89d4a54542f030ba9c8f807b9025 92 SUPERFAMILY SSF143414 3 90 3.27E-28 T 22-04-2016 RM25_RS06240 906e89d4a54542f030ba9c8f807b9025 92 PANTHER PTHR33941 1 89 1.3E-36 T 22-04-2016 RM25_RS06240 906e89d4a54542f030ba9c8f807b9025 92 Pfam PF00936 BMC domain 4 80 3.5E-27 T 22-04-2016 IPR000249 Microcompartment protein, bacteria RM25_RS06240 906e89d4a54542f030ba9c8f807b9025 92 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 47 1.0E-13 T 22-04-2016 RM25_RS08550 4b8ad8b685415c0185dd43dd272c27ab 111 PANTHER PTHR10438:SF266 4 102 1.5E-33 T 22-04-2016 RM25_RS08550 4b8ad8b685415c0185dd43dd272c27ab 111 Pfam PF00085 Thioredoxin 4 101 6.1E-26 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RM25_RS08550 4b8ad8b685415c0185dd43dd272c27ab 111 Gene3D G3DSA:3.40.30.10 3 102 1.0E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS08550 4b8ad8b685415c0185dd43dd272c27ab 111 SUPERFAMILY SSF52833 4 103 2.08E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS08550 4b8ad8b685415c0185dd43dd272c27ab 111 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RM25_RS08550 4b8ad8b685415c0185dd43dd272c27ab 111 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 9.5E-31 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RM25_RS08550 4b8ad8b685415c0185dd43dd272c27ab 111 PRINTS PR00421 Thioredoxin family signature 68 79 7.3E-8 T 22-04-2016 RM25_RS08550 4b8ad8b685415c0185dd43dd272c27ab 111 PRINTS PR00421 Thioredoxin family signature 29 38 7.3E-8 T 22-04-2016 RM25_RS08550 4b8ad8b685415c0185dd43dd272c27ab 111 PRINTS PR00421 Thioredoxin family signature 21 29 7.3E-8 T 22-04-2016 RM25_RS08550 4b8ad8b685415c0185dd43dd272c27ab 111 PIRSF PIRSF000077 1 104 1.6E-28 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RM25_RS08550 4b8ad8b685415c0185dd43dd272c27ab 111 PANTHER PTHR10438 4 102 1.5E-33 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RM25_RS10135 2223e9a10ac99927231c789a8a759bf4 127 Pfam PF01568 Molydopterin dinucleotide binding domain 5 93 4.9E-21 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RM25_RS10135 2223e9a10ac99927231c789a8a759bf4 127 PANTHER PTHR11615:SF35 1 122 1.1E-47 T 22-04-2016 RM25_RS10135 2223e9a10ac99927231c789a8a759bf4 127 Gene3D G3DSA:2.40.40.20 2 122 4.6E-30 T 22-04-2016 RM25_RS10135 2223e9a10ac99927231c789a8a759bf4 127 SUPERFAMILY SSF50692 3 121 7.67E-36 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RM25_RS10135 2223e9a10ac99927231c789a8a759bf4 127 PANTHER PTHR11615 1 122 1.1E-47 T 22-04-2016 RM25_RS06640 8bb1d1e4e70271ace72e368b18034f3f 204 Pfam PF01351 Ribonuclease HII 16 195 2.0E-30 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain RM25_RS06640 8bb1d1e4e70271ace72e368b18034f3f 204 Hamap MF_00052_B Ribonuclease HII [rnhB]. 14 195 32.398 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 RM25_RS06640 8bb1d1e4e70271ace72e368b18034f3f 204 PANTHER PTHR10954 15 199 5.8E-53 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 RM25_RS06640 8bb1d1e4e70271ace72e368b18034f3f 204 SUPERFAMILY SSF53098 4 199 4.86E-57 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS06640 8bb1d1e4e70271ace72e368b18034f3f 204 Gene3D G3DSA:3.30.420.10 15 155 1.9E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS04305 896ff3d0f7f4aab9dcd107a019ddebd0 217 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 19 192 1.8E-37 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RM25_RS04305 896ff3d0f7f4aab9dcd107a019ddebd0 217 Pfam PF01066 CDP-alcohol phosphatidyltransferase 19 88 2.2E-17 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RM25_RS04305 896ff3d0f7f4aab9dcd107a019ddebd0 217 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 66 88 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RM25_RS04305 896ff3d0f7f4aab9dcd107a019ddebd0 217 PIRSF PIRSF000847 15 201 4.9E-46 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RM25_RS04305 896ff3d0f7f4aab9dcd107a019ddebd0 217 PANTHER PTHR14269 15 191 1.7E-33 T 22-04-2016 RM25_RS06110 dac0e1cf797a0361c7de0f67eae4fcbd 342 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 40 170 4.3E-60 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RM25_RS06110 dac0e1cf797a0361c7de0f67eae4fcbd 342 Gene3D G3DSA:1.10.8.300 202 315 3.6E-34 T 22-04-2016 RM25_RS06110 dac0e1cf797a0361c7de0f67eae4fcbd 342 Gene3D G3DSA:3.40.50.300 22 186 6.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06110 dac0e1cf797a0361c7de0f67eae4fcbd 342 SUPERFAMILY SSF52540 10 295 1.25E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06110 dac0e1cf797a0361c7de0f67eae4fcbd 342 PIRSF PIRSF002849 1 321 6.4E-128 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RM25_RS06110 dac0e1cf797a0361c7de0f67eae4fcbd 342 PANTHER PTHR11603 8 319 5.2E-143 T 22-04-2016 RM25_RS06110 dac0e1cf797a0361c7de0f67eae4fcbd 342 PANTHER PTHR11603:SF153 8 319 5.2E-143 T 22-04-2016 RM25_RS03590 153956ab492673ad20373cf71038eebf 252 Gene3D G3DSA:3.40.1010.10 7 142 2.6E-30 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RM25_RS03590 153956ab492673ad20373cf71038eebf 252 PANTHER PTHR10882:SF1 8 166 9.7E-28 T 22-04-2016 RM25_RS03590 153956ab492673ad20373cf71038eebf 252 PANTHER PTHR10882 8 166 9.7E-28 T 22-04-2016 RM25_RS03590 153956ab492673ad20373cf71038eebf 252 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 8 241 3.7E-76 T 22-04-2016 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 RM25_RS03590 153956ab492673ad20373cf71038eebf 252 SUPERFAMILY SSF53790 8 240 1.24E-39 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS03590 153956ab492673ad20373cf71038eebf 252 PIRSF PIRSF036427 5 249 2.0E-69 T 22-04-2016 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 RM25_RS03590 153956ab492673ad20373cf71038eebf 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 8 223 1.3E-42 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RM25_RS01110 5527db62202525707195af686dcb92b1 214 Pfam PF00753 Metallo-beta-lactamase superfamily 13 166 2.4E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS01110 5527db62202525707195af686dcb92b1 214 SMART SM00849 13 187 5.5E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS01110 5527db62202525707195af686dcb92b1 214 Gene3D G3DSA:3.60.15.10 7 205 1.8E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS01110 5527db62202525707195af686dcb92b1 214 PANTHER PTHR11935 1 207 6.7E-52 T 22-04-2016 RM25_RS01110 5527db62202525707195af686dcb92b1 214 SUPERFAMILY SSF56281 2 204 2.75E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS09480 708f101804ee58d8ddffdb4e8652c5e1 356 Gene3D G3DSA:1.10.150.20 313 350 5.7E-4 T 22-04-2016 RM25_RS09480 708f101804ee58d8ddffdb4e8652c5e1 356 SUPERFAMILY SSF47781 300 347 1.45E-5 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RM25_RS09480 708f101804ee58d8ddffdb4e8652c5e1 356 Pfam PF10635 DisA bacterial checkpoint controller linker region 148 281 3.5E-38 T 22-04-2016 IPR018906 DNA integrity scanning, DisA, linker region RM25_RS09480 708f101804ee58d8ddffdb4e8652c5e1 356 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 30 142 9.2E-22 T 22-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal RM25_RS09480 708f101804ee58d8ddffdb4e8652c5e1 356 Gene3D G3DSA:3.40.1700.10 24 143 9.2E-26 T 22-04-2016 RM25_RS09480 708f101804ee58d8ddffdb4e8652c5e1 356 SUPERFAMILY SSF143597 17 144 3.27E-24 T 22-04-2016 RM25_RS03480 a8dfea7f7250eda453b5bf485f83af66 503 Pfam PF07690 Major Facilitator Superfamily 49 319 1.4E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS03480 a8dfea7f7250eda453b5bf485f83af66 503 Gene3D G3DSA:1.20.1250.20 45 217 1.3E-24 T 22-04-2016 RM25_RS03480 a8dfea7f7250eda453b5bf485f83af66 503 Gene3D G3DSA:1.20.1250.20 308 481 2.8E-9 T 22-04-2016 RM25_RS03480 a8dfea7f7250eda453b5bf485f83af66 503 PANTHER PTHR23501 39 269 7.2E-61 T 22-04-2016 RM25_RS03480 a8dfea7f7250eda453b5bf485f83af66 503 PANTHER PTHR23501 289 459 7.2E-61 T 22-04-2016 RM25_RS03480 a8dfea7f7250eda453b5bf485f83af66 503 PANTHER PTHR23501:SF91 289 459 7.2E-61 T 22-04-2016 RM25_RS03480 a8dfea7f7250eda453b5bf485f83af66 503 ProSitePatterns PS00217 Sugar transport proteins signature 2. 139 164 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS03480 a8dfea7f7250eda453b5bf485f83af66 503 PANTHER PTHR23501:SF91 39 269 7.2E-61 T 22-04-2016 RM25_RS03480 a8dfea7f7250eda453b5bf485f83af66 503 SUPERFAMILY SSF103473 40 234 5.89E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS03480 a8dfea7f7250eda453b5bf485f83af66 503 SUPERFAMILY SSF103473 286 483 5.89E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS11930 1921ed90b3f8f0a82dca7211f27e21f2 219 Pfam PF00395 S-layer homology domain 98 143 5.6E-8 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS11930 1921ed90b3f8f0a82dca7211f27e21f2 219 Pfam PF00395 S-layer homology domain 36 79 3.3E-9 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS06060 00fec0eb76bf14e8e678cb90672e8f76 318 Gene3D G3DSA:3.30.70.250 128 191 5.7E-21 T 22-04-2016 RM25_RS06060 00fec0eb76bf14e8e678cb90672e8f76 318 SUPERFAMILY SSF52151 185 307 3.66E-58 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RM25_RS06060 00fec0eb76bf14e8e678cb90672e8f76 318 SUPERFAMILY SSF52151 2 123 3.66E-58 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RM25_RS06060 00fec0eb76bf14e8e678cb90672e8f76 318 Gene3D G3DSA:3.40.366.10 192 297 1.0E-41 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RM25_RS06060 00fec0eb76bf14e8e678cb90672e8f76 318 Gene3D G3DSA:3.40.366.10 3 123 1.0E-41 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RM25_RS06060 00fec0eb76bf14e8e678cb90672e8f76 318 PANTHER PTHR10982 3 304 2.6E-71 T 22-04-2016 RM25_RS06060 00fec0eb76bf14e8e678cb90672e8f76 318 Pfam PF00698 Acyl transferase domain 7 215 1.5E-15 T 22-04-2016 IPR014043 Acyl transferase RM25_RS06060 00fec0eb76bf14e8e678cb90672e8f76 318 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 309 1.9E-14 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain RM25_RS06060 00fec0eb76bf14e8e678cb90672e8f76 318 SUPERFAMILY SSF55048 131 183 6.41E-11 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RM25_RS06305 b3755b73114abff0ed08562b599f9a51 175 SUPERFAMILY SSF55021 3 76 1.66E-20 T 22-04-2016 RM25_RS06305 b3755b73114abff0ed08562b599f9a51 175 SUPERFAMILY SSF55021 81 162 3.85E-24 T 22-04-2016 RM25_RS06305 b3755b73114abff0ed08562b599f9a51 175 Gene3D G3DSA:3.30.70.1150 85 164 1.3E-28 T 22-04-2016 RM25_RS06305 b3755b73114abff0ed08562b599f9a51 175 Pfam PF01842 ACT domain 4 70 7.4E-15 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RM25_RS06305 b3755b73114abff0ed08562b599f9a51 175 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 78 9.0E-25 T 22-04-2016 RM25_RS06305 b3755b73114abff0ed08562b599f9a51 175 Pfam PF10369 Small subunit of acetolactate synthase 86 158 4.1E-26 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS06305 b3755b73114abff0ed08562b599f9a51 175 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 158 6.5E-57 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RM25_RS06305 b3755b73114abff0ed08562b599f9a51 175 PANTHER PTHR30239 3 164 1.7E-74 T 22-04-2016 RM25_RS06305 b3755b73114abff0ed08562b599f9a51 175 Gene3D G3DSA:3.30.70.260 2 79 3.1E-32 T 22-04-2016 RM25_RS01140 448bef7986ec7b20604c5ebc628fc4f2 590 Gene3D G3DSA:3.40.50.300 285 391 8.1E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01140 448bef7986ec7b20604c5ebc628fc4f2 590 SMART SM00487 21 207 1.3E-14 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS01140 448bef7986ec7b20604c5ebc628fc4f2 590 SUPERFAMILY SSF52540 9 239 3.58E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01140 448bef7986ec7b20604c5ebc628fc4f2 590 SUPERFAMILY SSF52540 141 202 2.08E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01140 448bef7986ec7b20604c5ebc628fc4f2 590 SUPERFAMILY SSF52540 270 391 2.08E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01140 448bef7986ec7b20604c5ebc628fc4f2 590 Gene3D G3DSA:3.40.50.300 23 182 4.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01140 448bef7986ec7b20604c5ebc628fc4f2 590 Pfam PF04851 Type III restriction enzyme, res subunit 25 178 1.8E-14 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RM25_RS11415 af86a69612a661179385b4d43f6c4543 243 Pfam PF07859 alpha/beta hydrolase fold 60 144 7.0E-12 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RM25_RS11415 af86a69612a661179385b4d43f6c4543 243 PANTHER PTHR23024 37 215 2.4E-22 T 22-04-2016 RM25_RS11415 af86a69612a661179385b4d43f6c4543 243 SUPERFAMILY SSF53474 33 242 1.28E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS11415 af86a69612a661179385b4d43f6c4543 243 PANTHER PTHR23024:SF41 37 215 2.4E-22 T 22-04-2016 RM25_RS11415 af86a69612a661179385b4d43f6c4543 243 Gene3D G3DSA:3.40.50.1820 12 241 1.0E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS07810 6db8b3bf01b70dfc3b3fc2149d28c36a 88 SUPERFAMILY SSF47413 5 71 5.36E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS07810 6db8b3bf01b70dfc3b3fc2149d28c36a 88 Pfam PF01381 Helix-turn-helix 13 65 9.8E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RM25_RS07810 6db8b3bf01b70dfc3b3fc2149d28c36a 88 Gene3D G3DSA:1.10.260.40 2 73 1.2E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS07810 6db8b3bf01b70dfc3b3fc2149d28c36a 88 SMART SM00530 12 67 1.3E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RM25_RS12115 9c8b1f6ebdc280ff0a5ced1ea060e698 243 PANTHER PTHR11080 8 159 1.5E-19 T 22-04-2016 RM25_RS12115 9c8b1f6ebdc280ff0a5ced1ea060e698 243 Gene3D G3DSA:3.40.50.850 26 171 1.4E-28 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RM25_RS12115 9c8b1f6ebdc280ff0a5ced1ea060e698 243 SUPERFAMILY SSF52499 30 169 1.57E-30 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RM25_RS12115 9c8b1f6ebdc280ff0a5ced1ea060e698 243 Pfam PF00857 Isochorismatase family 34 166 1.1E-22 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 ProSitePatterns PS01008 DnaA protein signature. 444 463 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 SMART SM00382 181 310 2.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 34 484 5.4E-158 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 SUPERFAMILY SSF48295 381 486 7.32E-36 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 397 463 1.0E-30 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 18 485 31.901 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 Gene3D G3DSA:1.10.1750.10 385 486 1.1E-39 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 PANTHER PTHR30050:SF2 147 487 3.5E-189 T 22-04-2016 RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 PANTHER PTHR30050:SF2 35 111 3.5E-189 T 22-04-2016 RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 Gene3D G3DSA:3.40.50.300 143 314 5.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 Pfam PF00308 Bacterial dnaA protein 149 367 7.6E-98 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 SMART SM00760 394 463 4.4E-39 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 247 261 2.1E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 281 308 2.1E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 444 463 2.1E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 214 228 2.1E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 182 202 2.1E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 Gene3D G3DSA:1.10.8.60 317 384 5.0E-28 T 22-04-2016 RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 SUPERFAMILY SSF52540 149 361 1.35E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 PANTHER PTHR30050 147 487 3.5E-189 T 22-04-2016 RM25_RS00005 21859690d290b4e7d6653d39248b43d5 491 PANTHER PTHR30050 35 111 3.5E-189 T 22-04-2016 RM25_RS01260 23b876800bb1b9d4a0e959dd63b389c1 490 PANTHER PTHR31806:SF2 13 484 1.6E-65 T 22-04-2016 RM25_RS01260 23b876800bb1b9d4a0e959dd63b389c1 490 PANTHER PTHR31806 13 484 1.6E-65 T 22-04-2016 RM25_RS01260 23b876800bb1b9d4a0e959dd63b389c1 490 PIRSF PIRSF002744 2 485 7.8E-96 T 22-04-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 RM25_RS01260 23b876800bb1b9d4a0e959dd63b389c1 490 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 20 435 9.7E-52 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 RM25_RS09350 d64b69853b9f4c81b96db10b2e9d6840 359 TIGRFAM TIGR03450 mycothiol_INO1: inositol 1-phosphate synthase 4 353 1.6E-198 T 22-04-2016 IPR017815 Myo-inositol 1-phosphate synthase, actinobacteria RM25_RS09350 d64b69853b9f4c81b96db10b2e9d6840 359 SUPERFAMILY SSF51735 3 185 1.18E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS09350 d64b69853b9f4c81b96db10b2e9d6840 359 SUPERFAMILY SSF51735 296 355 1.18E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS09350 d64b69853b9f4c81b96db10b2e9d6840 359 PANTHER PTHR11510:SF9 4 355 3.5E-142 T 22-04-2016 RM25_RS09350 d64b69853b9f4c81b96db10b2e9d6840 359 SUPERFAMILY SSF55347 190 298 1.06E-34 T 22-04-2016 RM25_RS09350 d64b69853b9f4c81b96db10b2e9d6840 359 PANTHER PTHR11510 4 355 3.5E-142 T 22-04-2016 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|UniPathway: UPA00823 RM25_RS09350 d64b69853b9f4c81b96db10b2e9d6840 359 PIRSF PIRSF015578 1 355 2.9E-88 T 22-04-2016 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|UniPathway: UPA00823 RM25_RS09350 d64b69853b9f4c81b96db10b2e9d6840 359 Gene3D G3DSA:3.40.50.720 300 354 6.6E-110 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS09350 d64b69853b9f4c81b96db10b2e9d6840 359 Gene3D G3DSA:3.40.50.720 1 189 6.6E-110 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS09350 d64b69853b9f4c81b96db10b2e9d6840 359 Gene3D G3DSA:3.30.360.10 190 299 3.8E-47 T 22-04-2016 RM25_RS09350 d64b69853b9f4c81b96db10b2e9d6840 359 Pfam PF01658 Myo-inositol-1-phosphate synthase 191 299 9.8E-33 T 22-04-2016 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|UniPathway: UPA00823 RM25_RS09570 9413d7d2de1582e0708255e3e8c862da 302 SUPERFAMILY SSF55486 5 296 1.54E-59 T 22-04-2016 RM25_RS09570 9413d7d2de1582e0708255e3e8c862da 302 TIGRFAM TIGR03883 DUF2342_F420: uncharacterized protein, coenzyme F420 biosynthesis associated 2 296 2.6E-76 T 22-04-2016 IPR022454 Conserved hypothetical protein CHP03883, F420 biosynthesis associated RM25_RS09570 9413d7d2de1582e0708255e3e8c862da 302 Pfam PF10103 Zinicin-like metallopeptidase 1 293 1.2E-75 T 22-04-2016 IPR018766 Zinicin-like metallopeptidase type 2 RM25_RS09570 9413d7d2de1582e0708255e3e8c862da 302 PANTHER PTHR39420 14 296 1.8E-57 T 22-04-2016 RM25_RS09570 9413d7d2de1582e0708255e3e8c862da 302 PANTHER PTHR39420:SF1 14 296 1.8E-57 T 22-04-2016 RM25_RS09570 9413d7d2de1582e0708255e3e8c862da 302 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 1 296 5.6E-65 T 22-04-2016 IPR018766 Zinicin-like metallopeptidase type 2 RM25_RS07825 168ce6a5c9c83d783bc6c42baeb7668b 321 SUPERFAMILY SSF53850 103 300 6.83E-37 T 22-04-2016 RM25_RS07825 168ce6a5c9c83d783bc6c42baeb7668b 321 Gene3D G3DSA:3.40.190.10 188 274 2.5E-25 T 22-04-2016 RM25_RS07825 168ce6a5c9c83d783bc6c42baeb7668b 321 SUPERFAMILY SSF46785 16 121 6.18E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07825 168ce6a5c9c83d783bc6c42baeb7668b 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 2.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RM25_RS07825 168ce6a5c9c83d783bc6c42baeb7668b 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 2.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RM25_RS07825 168ce6a5c9c83d783bc6c42baeb7668b 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 2.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RM25_RS07825 168ce6a5c9c83d783bc6c42baeb7668b 321 PANTHER PTHR30346 14 316 1.0E-58 T 22-04-2016 RM25_RS07825 168ce6a5c9c83d783bc6c42baeb7668b 321 Gene3D G3DSA:1.10.10.10 15 85 2.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07825 168ce6a5c9c83d783bc6c42baeb7668b 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 72 1.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RM25_RS07825 168ce6a5c9c83d783bc6c42baeb7668b 321 Pfam PF03466 LysR substrate binding domain 102 299 8.7E-39 T 22-04-2016 IPR005119 LysR, substrate-binding RM25_RS07825 168ce6a5c9c83d783bc6c42baeb7668b 321 Gene3D G3DSA:3.40.190.10 103 187 1.8E-16 T 22-04-2016 RM25_RS00660 c14ab2c69b695e10fb6f8d27d88cb800 394 SUPERFAMILY SSF116734 191 390 3.11E-27 T 22-04-2016 RM25_RS00660 c14ab2c69b695e10fb6f8d27d88cb800 394 SUPERFAMILY SSF116734 6 185 5.89E-31 T 22-04-2016 RM25_RS00660 c14ab2c69b695e10fb6f8d27d88cb800 394 Pfam PF01420 Type I restriction modification DNA specificity domain 14 166 3.6E-19 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RM25_RS00660 c14ab2c69b695e10fb6f8d27d88cb800 394 Pfam PF01420 Type I restriction modification DNA specificity domain 221 373 1.8E-10 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RM25_RS00660 c14ab2c69b695e10fb6f8d27d88cb800 394 PANTHER PTHR30408:SF2 61 389 8.9E-16 T 22-04-2016 RM25_RS00660 c14ab2c69b695e10fb6f8d27d88cb800 394 PANTHER PTHR30408 61 389 8.9E-16 T 22-04-2016 RM25_RS04805 253ed38cbdf1e52d9839804872a3720d 61 Pfam PF05154 TM2 domain 1 42 7.4E-16 T 22-04-2016 IPR007829 TM2 domain RM25_RS04805 253ed38cbdf1e52d9839804872a3720d 61 PANTHER PTHR21016 1 44 2.1E-16 T 22-04-2016 RM25_RS04695 17c35e75bc043ecfdce8da930749d04d 127 PANTHER PTHR11715 1 123 5.3E-50 T 22-04-2016 IPR002930 Glycine cleavage system H-protein RM25_RS04695 17c35e75bc043ecfdce8da930749d04d 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 124 7.6E-44 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 RM25_RS04695 17c35e75bc043ecfdce8da930749d04d 127 Gene3D G3DSA:2.40.50.100 6 125 3.2E-44 T 22-04-2016 RM25_RS04695 17c35e75bc043ecfdce8da930749d04d 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 126 26.982 T 22-04-2016 IPR002930 Glycine cleavage system H-protein RM25_RS04695 17c35e75bc043ecfdce8da930749d04d 127 SUPERFAMILY SSF51230 3 125 5.63E-37 T 22-04-2016 IPR011053 Single hybrid motif RM25_RS04695 17c35e75bc043ecfdce8da930749d04d 127 Pfam PF01597 Glycine cleavage H-protein 7 124 2.8E-38 T 22-04-2016 IPR002930 Glycine cleavage system H-protein RM25_RS04695 17c35e75bc043ecfdce8da930749d04d 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RM25_RS01430 dfc408180e35ad76d08f176706952f37 297 PANTHER PTHR31756 8 290 2.5E-80 T 22-04-2016 RM25_RS01430 dfc408180e35ad76d08f176706952f37 297 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 6 278 53.371 T 22-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein RM25_RS01430 dfc408180e35ad76d08f176706952f37 297 PANTHER PTHR31756:SF3 8 290 2.5E-80 T 22-04-2016 RM25_RS01430 dfc408180e35ad76d08f176706952f37 297 Pfam PF03618 Kinase/pyrophosphorylase 8 272 1.3E-76 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 RM25_RS01195 c7c9da0d0dc095777112cebb37e77087 331 Pfam PF01497 Periplasmic binding protein 63 269 3.6E-18 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RM25_RS01195 c7c9da0d0dc095777112cebb37e77087 331 Gene3D G3DSA:3.40.50.1980 44 166 5.2E-28 T 22-04-2016 RM25_RS01195 c7c9da0d0dc095777112cebb37e77087 331 Gene3D G3DSA:3.40.50.1980 167 328 2.9E-18 T 22-04-2016 RM25_RS01195 c7c9da0d0dc095777112cebb37e77087 331 SUPERFAMILY SSF53807 47 325 4.32E-51 T 22-04-2016 RM25_RS01195 c7c9da0d0dc095777112cebb37e77087 331 PANTHER PTHR30532 1 329 2.6E-57 T 22-04-2016 RM25_RS09380 b4f4818b92b4ae8009ca0137b6eb9721 296 Pfam PF00293 NUDIX domain 8 122 2.0E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RM25_RS09380 b4f4818b92b4ae8009ca0137b6eb9721 296 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RM25_RS09380 b4f4818b92b4ae8009ca0137b6eb9721 296 PANTHER PTHR22769:SF27 7 200 2.2E-26 T 22-04-2016 RM25_RS09380 b4f4818b92b4ae8009ca0137b6eb9721 296 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 141 218 2.7E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS09380 b4f4818b92b4ae8009ca0137b6eb9721 296 Gene3D G3DSA:3.90.79.10 7 130 2.9E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS09380 b4f4818b92b4ae8009ca0137b6eb9721 296 SUPERFAMILY SSF55811 4 131 8.67E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS09380 b4f4818b92b4ae8009ca0137b6eb9721 296 SUPERFAMILY SSF53254 140 282 1.52E-15 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS09380 b4f4818b92b4ae8009ca0137b6eb9721 296 PANTHER PTHR22769 7 200 2.2E-26 T 22-04-2016 RM25_RS09380 b4f4818b92b4ae8009ca0137b6eb9721 296 Gene3D G3DSA:3.40.50.1240 140 281 2.3E-19 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS09380 b4f4818b92b4ae8009ca0137b6eb9721 296 SMART SM00855 140 259 2.8E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS02780 8237c4ff2136c7fe93574e0acb7621b4 135 Pfam PF00411 Ribosomal protein S11 25 134 6.4E-47 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RM25_RS02780 8237c4ff2136c7fe93574e0acb7621b4 135 PANTHER PTHR11759 16 135 1.8E-64 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RM25_RS02780 8237c4ff2136c7fe93574e0acb7621b4 135 PIRSF PIRSF002131 1 135 4.9E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RM25_RS02780 8237c4ff2136c7fe93574e0acb7621b4 135 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 16 132 1.4E-56 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02780 8237c4ff2136c7fe93574e0acb7621b4 135 SUPERFAMILY SSF53137 20 135 1.44E-47 T 22-04-2016 RM25_RS02780 8237c4ff2136c7fe93574e0acb7621b4 135 ProSitePatterns PS00054 Ribosomal protein S11 signature. 103 125 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site RM25_RS02780 8237c4ff2136c7fe93574e0acb7621b4 135 Gene3D G3DSA:3.30.420.80 12 135 1.7E-53 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RM25_RS02780 8237c4ff2136c7fe93574e0acb7621b4 135 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 6 135 33.399 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RM25_RS07375 7c5a245614782864532522b0a9a6beff 170 Gene3D G3DSA:2.40.100.10 3 169 4.4E-62 T 22-04-2016 IPR029000 Cyclophilin-like domain RM25_RS07375 7c5a245614782864532522b0a9a6beff 170 PANTHER PTHR11071 4 168 6.7E-73 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RM25_RS07375 7c5a245614782864532522b0a9a6beff 170 SUPERFAMILY SSF50891 3 168 9.35E-63 T 22-04-2016 IPR029000 Cyclophilin-like domain RM25_RS07375 7c5a245614782864532522b0a9a6beff 170 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 167 2.6E-46 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RM25_RS07375 7c5a245614782864532522b0a9a6beff 170 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 53 70 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RM25_RS07375 7c5a245614782864532522b0a9a6beff 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 3.4E-26 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RM25_RS07375 7c5a245614782864532522b0a9a6beff 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 3.4E-26 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RM25_RS07375 7c5a245614782864532522b0a9a6beff 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 58 70 3.4E-26 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RM25_RS07375 7c5a245614782864532522b0a9a6beff 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 3.4E-26 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RM25_RS07375 7c5a245614782864532522b0a9a6beff 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 3.4E-26 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RM25_RS07375 7c5a245614782864532522b0a9a6beff 170 PIRSF PIRSF001467 1 170 3.4E-55 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RM25_RS05545 fcf7b6069e33c3eabfa89bab9851b08e 202 SUPERFAMILY SSF89028 6 196 1.73E-56 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RM25_RS05545 fcf7b6069e33c3eabfa89bab9851b08e 202 Pfam PF01923 Cobalamin adenosyltransferase 7 182 3.7E-55 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RM25_RS05545 fcf7b6069e33c3eabfa89bab9851b08e 202 Gene3D G3DSA:1.20.1200.10 16 198 3.5E-59 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RM25_RS05545 fcf7b6069e33c3eabfa89bab9851b08e 202 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 194 1.0E-49 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RM25_RS05545 fcf7b6069e33c3eabfa89bab9851b08e 202 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 13 132 9.0E-37 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RM25_RS05545 fcf7b6069e33c3eabfa89bab9851b08e 202 PANTHER PTHR12213 1 195 1.4E-70 T 22-04-2016 RM25_RS09435 55100b1dae7c7b84f1bb4f9a5e5ef4ab 227 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 17 201 2.1E-28 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS09435 55100b1dae7c7b84f1bb4f9a5e5ef4ab 227 PANTHER PTHR23029 14 214 8.3E-58 T 22-04-2016 RM25_RS09435 55100b1dae7c7b84f1bb4f9a5e5ef4ab 227 Gene3D G3DSA:3.40.50.1240 15 202 1.4E-25 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS09435 55100b1dae7c7b84f1bb4f9a5e5ef4ab 227 SMART SM00855 15 169 6.0E-13 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS09435 55100b1dae7c7b84f1bb4f9a5e5ef4ab 227 SUPERFAMILY SSF53254 14 206 2.57E-30 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS09435 55100b1dae7c7b84f1bb4f9a5e5ef4ab 227 PANTHER PTHR23029:SF35 14 214 8.3E-58 T 22-04-2016 RM25_RS08080 366ab537bfc2e03fae498c876b26a5c8 205 PANTHER PTHR30055 5 151 1.8E-24 T 22-04-2016 RM25_RS08080 366ab537bfc2e03fae498c876b26a5c8 205 SUPERFAMILY SSF48498 73 204 2.89E-27 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RM25_RS08080 366ab537bfc2e03fae498c876b26a5c8 205 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 69 203 7.1E-22 T 22-04-2016 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 RM25_RS08080 366ab537bfc2e03fae498c876b26a5c8 205 Gene3D G3DSA:1.10.357.10 2 204 1.2E-53 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS08080 366ab537bfc2e03fae498c876b26a5c8 205 SUPERFAMILY SSF46689 2 62 6.16E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS08080 366ab537bfc2e03fae498c876b26a5c8 205 PANTHER PTHR30055:SF36 5 151 1.8E-24 T 22-04-2016 RM25_RS08080 366ab537bfc2e03fae498c876b26a5c8 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 54 3.2E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS08080 366ab537bfc2e03fae498c876b26a5c8 205 PRINTS PR00400 Tetracycline repressor protein signature 22 45 7.8E-9 T 22-04-2016 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RM25_RS08080 366ab537bfc2e03fae498c876b26a5c8 205 PRINTS PR00400 Tetracycline repressor protein signature 75 94 7.8E-9 T 22-04-2016 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RM25_RS08080 366ab537bfc2e03fae498c876b26a5c8 205 PRINTS PR00400 Tetracycline repressor protein signature 188 202 7.8E-9 T 22-04-2016 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RM25_RS08080 366ab537bfc2e03fae498c876b26a5c8 205 PRINTS PR00400 Tetracycline repressor protein signature 132 151 7.8E-9 T 22-04-2016 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RM25_RS00190 d74e3cf8eb34e75f3846fbd68a1c2e22 460 Pfam PF13796 Putative sensor 17 204 9.5E-20 T 22-04-2016 IPR025828 Putative sensor domain RM25_RS00190 d74e3cf8eb34e75f3846fbd68a1c2e22 460 PANTHER PTHR24421 401 447 5.1E-27 T 22-04-2016 RM25_RS00190 d74e3cf8eb34e75f3846fbd68a1c2e22 460 PANTHER PTHR24421 177 375 5.1E-27 T 22-04-2016 RM25_RS00190 d74e3cf8eb34e75f3846fbd68a1c2e22 460 Pfam PF07730 Histidine kinase 242 305 7.3E-12 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RM25_RS00190 d74e3cf8eb34e75f3846fbd68a1c2e22 460 PANTHER PTHR24421:SF13 401 447 5.1E-27 T 22-04-2016 RM25_RS00190 d74e3cf8eb34e75f3846fbd68a1c2e22 460 PANTHER PTHR24421:SF13 177 375 5.1E-27 T 22-04-2016 RM25_RS08390 645af719c287ffb848a4bb7c042fb5f3 141 TIGRFAM TIGR01068 thioredoxin: thioredoxin 43 137 1.9E-32 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RM25_RS08390 645af719c287ffb848a4bb7c042fb5f3 141 PRINTS PR00421 Thioredoxin family signature 64 73 6.6E-8 T 22-04-2016 RM25_RS08390 645af719c287ffb848a4bb7c042fb5f3 141 PRINTS PR00421 Thioredoxin family signature 104 115 6.6E-8 T 22-04-2016 RM25_RS08390 645af719c287ffb848a4bb7c042fb5f3 141 PRINTS PR00421 Thioredoxin family signature 56 64 6.6E-8 T 22-04-2016 RM25_RS08390 645af719c287ffb848a4bb7c042fb5f3 141 SUPERFAMILY SSF52833 33 140 1.19E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS08390 645af719c287ffb848a4bb7c042fb5f3 141 Gene3D G3DSA:3.40.30.10 37 139 1.1E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS08390 645af719c287ffb848a4bb7c042fb5f3 141 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RM25_RS08390 645af719c287ffb848a4bb7c042fb5f3 141 PANTHER PTHR10438 26 137 1.9E-31 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RM25_RS08390 645af719c287ffb848a4bb7c042fb5f3 141 Pfam PF00085 Thioredoxin 40 137 1.5E-25 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RM25_RS08390 645af719c287ffb848a4bb7c042fb5f3 141 PANTHER PTHR10438:SF281 26 137 1.9E-31 T 22-04-2016 RM25_RS02065 7bdd53bf18a443fdc4b1212f9526d67d 264 PANTHER PTHR34857 9 263 1.2E-33 T 22-04-2016 RM25_RS02065 7bdd53bf18a443fdc4b1212f9526d67d 264 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 23 225 2.0E-57 T 22-04-2016 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 RM25_RS02065 7bdd53bf18a443fdc4b1212f9526d67d 264 PANTHER PTHR34857:SF1 9 263 1.2E-33 T 22-04-2016 RM25_RS02065 7bdd53bf18a443fdc4b1212f9526d67d 264 Pfam PF02361 Cobalt transport protein 20 229 1.8E-30 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component RM25_RS02355 512db7a8d843ac11dabaa8c805eb5217 243 PIRSF PIRSF000216 8 233 1.5E-72 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RM25_RS02355 512db7a8d843ac11dabaa8c805eb5217 243 SUPERFAMILY SSF52833 26 186 7.94E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS02355 512db7a8d843ac11dabaa8c805eb5217 243 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 134 152 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RM25_RS02355 512db7a8d843ac11dabaa8c805eb5217 243 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 34 176 1.0E-49 T 22-04-2016 RM25_RS02355 512db7a8d843ac11dabaa8c805eb5217 243 PANTHER PTHR10371 26 235 8.3E-61 T 22-04-2016 RM25_RS02355 512db7a8d843ac11dabaa8c805eb5217 243 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 34 176 1.3E-46 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RM25_RS02355 512db7a8d843ac11dabaa8c805eb5217 243 Gene3D G3DSA:3.40.30.10 98 184 4.4E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS08365 df067727865d06c5491ca485f3b46d4c 307 SMART SM00387 213 303 6.0E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS08365 df067727865d06c5491ca485f3b46d4c 307 Gene3D G3DSA:3.30.565.10 204 301 1.4E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS08365 df067727865d06c5491ca485f3b46d4c 307 SUPERFAMILY SSF55874 180 299 2.88E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS08365 df067727865d06c5491ca485f3b46d4c 307 Pfam PF07730 Histidine kinase 114 176 3.3E-15 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RM25_RS08365 df067727865d06c5491ca485f3b46d4c 307 PANTHER PTHR24421:SF1 94 302 1.2E-41 T 22-04-2016 RM25_RS08365 df067727865d06c5491ca485f3b46d4c 307 PANTHER PTHR24421 94 302 1.2E-41 T 22-04-2016 RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.2E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.2E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.2E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 PANTHER PTHR24322 6 178 4.6E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 Gene3D G3DSA:3.40.50.720 3 217 1.1E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.2E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.2E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 3.2E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 3.2E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 3.2E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 SUPERFAMILY SSF51735 3 244 5.35E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 PANTHER PTHR24322:SF57 6 178 4.6E-30 T 22-04-2016 RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 PIRSF PIRSF000126 1 258 1.1E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00385 4c21447824dd605134e7d7c1126104ce 268 Pfam PF00106 short chain dehydrogenase 3 186 2.2E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 SUPERFAMILY SSF50331 598 685 8.02E-16 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 49 253 8.7E-55 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 Pfam PF03459 TOBE domain 623 685 5.5E-14 T 22-04-2016 IPR005116 Transport-associated OB, type 1 RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 63 255 3.7E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 Gene3D G3DSA:3.40.50.300 298 514 7.9E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 SUPERFAMILY SSF52540 298 514 2.83E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 Gene3D G3DSA:2.40.50.100 621 686 1.2E-15 T 22-04-2016 RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 PANTHER PTHR24220 299 516 3.5E-70 T 22-04-2016 RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 SMART SM00382 305 494 3.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 SUPERFAMILY SSF161098 5 251 1.16E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 Pfam PF00005 ABC transporter 298 443 1.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 Gene3D G3DSA:1.10.3720.10 8 257 6.9E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10095 941bf4cda63a35d4547e919a1cd3b5c2 694 TIGRFAM TIGR01581 Mo_ABC_porter: NifC-like ABC-type porter 29 245 3.4E-63 T 22-04-2016 IPR006469 NifC-like ABC-type porter GO:0005215|GO:0006810|GO:0016020 RM25_RS11505 30ac494ea4c31cbc38b54f4ef1e63fd7 218 SUPERFAMILY SSF51735 7 197 3.24E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS11505 30ac494ea4c31cbc38b54f4ef1e63fd7 218 Pfam PF13460 NAD(P)H-binding 14 195 2.8E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS11505 30ac494ea4c31cbc38b54f4ef1e63fd7 218 Gene3D G3DSA:3.40.50.720 7 205 3.4E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS11505 30ac494ea4c31cbc38b54f4ef1e63fd7 218 PANTHER PTHR15020 8 196 8.9E-31 T 22-04-2016 RM25_RS11210 66b99bd59632995f67b8fbcfa5f7f1d7 124 PANTHER PTHR36849:SF1 1 122 5.0E-45 T 22-04-2016 RM25_RS11210 66b99bd59632995f67b8fbcfa5f7f1d7 124 Pfam PF04343 Protein of unknown function, DUF488 16 116 7.6E-28 T 22-04-2016 IPR007438 Protein of unknown function DUF488 RM25_RS11210 66b99bd59632995f67b8fbcfa5f7f1d7 124 PANTHER PTHR36849 1 122 5.0E-45 T 22-04-2016 RM25_RS10620 c11732fa90fa41e1f0f54286103f9712 154 PANTHER PTHR11527 18 154 6.9E-30 T 22-04-2016 IPR031107 Small heat shock protein HSP20 RM25_RS10620 c11732fa90fa41e1f0f54286103f9712 154 PANTHER PTHR11527:SF118 18 154 6.9E-30 T 22-04-2016 RM25_RS10620 c11732fa90fa41e1f0f54286103f9712 154 Pfam PF00011 Hsp20/alpha crystallin family 56 151 4.4E-24 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RM25_RS10620 c11732fa90fa41e1f0f54286103f9712 154 Gene3D G3DSA:2.60.40.790 14 152 3.2E-35 T 22-04-2016 IPR008978 HSP20-like chaperone RM25_RS10620 c11732fa90fa41e1f0f54286103f9712 154 SUPERFAMILY SSF49764 16 151 1.36E-32 T 22-04-2016 IPR008978 HSP20-like chaperone RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 Gene3D G3DSA:1.20.150.20 385 512 2.5E-48 T 22-04-2016 RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 31 96 1.5E-12 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 513 47.047 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 Gene3D G3DSA:2.40.30.20 6 97 1.4E-28 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 512 2.3E-227 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 SUPERFAMILY SSF52540 100 383 1.64E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 SUPERFAMILY SSF47917 385 512 2.04E-42 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 SUPERFAMILY SSF50615 25 98 4.91E-23 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 Gene3D G3DSA:3.40.50.300 98 384 1.6E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 507 1.4E-42 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 377 2.0E-66 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 PANTHER PTHR15184 1 497 1.7E-266 T 22-04-2016 RM25_RS05575 1512df4d573c5a71979bbfa108463c10 545 PANTHER PTHR15184:SF3 1 497 1.7E-266 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 608 36.421 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 SUPERFAMILY SSF100920 356 512 2.22E-61 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 PANTHER PTHR19375 2 605 0.0 T 22-04-2016 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 Gene3D G3DSA:3.30.30.30 39 100 9.9E-17 T 22-04-2016 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 SUPERFAMILY SSF53067 5 160 3.67E-58 T 22-04-2016 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 4 576 2.8E-279 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 Pfam PF00012 Hsp70 protein 79 576 1.7E-213 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 Pfam PF00012 Hsp70 protein 5 78 6.2E-29 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 Gene3D G3DSA:1.20.1270.10 504 576 2.2E-19 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 PANTHER PTHR19375:SF173 2 605 0.0 T 22-04-2016 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 Gene3D G3DSA:3.30.420.40 291 333 3.4E-33 T 22-04-2016 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 Gene3D G3DSA:3.30.420.40 167 201 3.4E-33 T 22-04-2016 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 SUPERFAMILY SSF53067 163 354 1.18E-65 T 22-04-2016 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 Gene3D G3DSA:3.90.640.10 202 287 1.9E-30 T 22-04-2016 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 Gene3D G3DSA:3.30.420.40 4 38 8.5E-58 T 22-04-2016 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 Gene3D G3DSA:3.30.420.40 101 166 8.5E-58 T 22-04-2016 RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.59E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 PRINTS PR00301 70kDa heat shock protein signature 174 184 3.59E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.59E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.59E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 PRINTS PR00301 70kDa heat shock protein signature 360 379 3.59E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 PRINTS PR00301 70kDa heat shock protein signature 114 134 3.59E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 PRINTS PR00301 70kDa heat shock protein signature 306 322 3.59E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 PRINTS PR00301 70kDa heat shock protein signature 441 457 3.59E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 PRINTS PR00301 70kDa heat shock protein signature 337 357 3.59E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 Gene3D G3DSA:2.60.34.10 362 503 1.4E-71 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RM25_RS08340 c627e50e8c0b7a265b2eb8d0b8837ba6 609 SUPERFAMILY SSF100934 479 579 3.27E-12 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RM25_RS10625 dbd0de5abf05c721dafeb212294bb007 644 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 12 644 30.381 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup RM25_RS10625 dbd0de5abf05c721dafeb212294bb007 644 Pfam PF02705 K+ potassium transporter 21 557 1.0E-196 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 RM25_RS10625 dbd0de5abf05c721dafeb212294bb007 644 PANTHER PTHR30540:SF7 19 566 5.8E-198 T 22-04-2016 RM25_RS10625 dbd0de5abf05c721dafeb212294bb007 644 PANTHER PTHR30540 19 566 5.8E-198 T 22-04-2016 RM25_RS08675 58f61d28804151bd8d2f296c2b095b34 776 PANTHER PTHR33406 2 317 2.6E-100 T 22-04-2016 RM25_RS08675 58f61d28804151bd8d2f296c2b095b34 776 PANTHER PTHR33406 333 772 2.6E-100 T 22-04-2016 RM25_RS08675 58f61d28804151bd8d2f296c2b095b34 776 SUPERFAMILY SSF82866 184 403 1.01E-19 T 22-04-2016 RM25_RS08675 58f61d28804151bd8d2f296c2b095b34 776 SUPERFAMILY SSF82866 565 760 4.05E-28 T 22-04-2016 RM25_RS08675 58f61d28804151bd8d2f296c2b095b34 776 Pfam PF03176 MMPL family 63 403 3.4E-34 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RM25_RS08675 58f61d28804151bd8d2f296c2b095b34 776 Pfam PF03176 MMPL family 551 763 2.4E-33 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RM25_RS08675 58f61d28804151bd8d2f296c2b095b34 776 Gene3D G3DSA:1.20.1640.10 204 401 8.6E-21 T 22-04-2016 RM25_RS08675 58f61d28804151bd8d2f296c2b095b34 776 Gene3D G3DSA:1.20.1640.10 548 766 6.6E-34 T 22-04-2016 RM25_RS08675 58f61d28804151bd8d2f296c2b095b34 776 PANTHER PTHR33406:SF1 2 317 2.6E-100 T 22-04-2016 RM25_RS08675 58f61d28804151bd8d2f296c2b095b34 776 PANTHER PTHR33406:SF1 333 772 2.6E-100 T 22-04-2016 RM25_RS06575 201af119a09ed969aa344c59664f4d9b 329 Gene3D G3DSA:3.20.20.100 1 312 8.2E-86 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS06575 201af119a09ed969aa344c59664f4d9b 329 SUPERFAMILY SSF51430 1 312 6.42E-84 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS06575 201af119a09ed969aa344c59664f4d9b 329 PANTHER PTHR11732 1 311 7.4E-98 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RM25_RS06575 201af119a09ed969aa344c59664f4d9b 329 Pfam PF00248 Aldo/keto reductase family 16 311 1.4E-56 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS06740 4b27a9d9407f4cf59f6400edc84b6a53 186 Pfam PF02620 Uncharacterized ACR, COG1399 66 173 4.4E-28 T 22-04-2016 IPR003772 Protein of unknown function DUF177 RM25_RS06740 4b27a9d9407f4cf59f6400edc84b6a53 186 PANTHER PTHR34374 1 185 2.0E-32 T 22-04-2016 RM25_RS03395 70894701fc72ea30772ea7ec2558e063 333 Gene3D G3DSA:3.30.420.10 131 158 1.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03395 70894701fc72ea30772ea7ec2558e063 333 Gene3D G3DSA:3.30.420.10 190 321 1.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03395 70894701fc72ea30772ea7ec2558e063 333 PANTHER PTHR24559 183 316 2.8E-16 T 22-04-2016 RM25_RS03395 70894701fc72ea30772ea7ec2558e063 333 PANTHER PTHR24559 125 149 2.8E-16 T 22-04-2016 RM25_RS03395 70894701fc72ea30772ea7ec2558e063 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 78 1.7E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS03395 70894701fc72ea30772ea7ec2558e063 333 SUPERFAMILY SSF46689 4 107 3.31E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS03395 70894701fc72ea30772ea7ec2558e063 333 SUPERFAMILY SSF53098 137 148 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03395 70894701fc72ea30772ea7ec2558e063 333 SUPERFAMILY SSF53098 187 328 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03395 70894701fc72ea30772ea7ec2558e063 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03395 70894701fc72ea30772ea7ec2558e063 333 Pfam PF00665 Integrase core domain 136 284 1.8E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS05825 70894701fc72ea30772ea7ec2558e063 333 Gene3D G3DSA:3.30.420.10 131 158 1.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS05825 70894701fc72ea30772ea7ec2558e063 333 Gene3D G3DSA:3.30.420.10 190 321 1.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS05825 70894701fc72ea30772ea7ec2558e063 333 PANTHER PTHR24559 183 316 2.8E-16 T 22-04-2016 RM25_RS05825 70894701fc72ea30772ea7ec2558e063 333 PANTHER PTHR24559 125 149 2.8E-16 T 22-04-2016 RM25_RS05825 70894701fc72ea30772ea7ec2558e063 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 78 1.7E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS05825 70894701fc72ea30772ea7ec2558e063 333 SUPERFAMILY SSF46689 4 107 3.31E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS05825 70894701fc72ea30772ea7ec2558e063 333 SUPERFAMILY SSF53098 137 148 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS05825 70894701fc72ea30772ea7ec2558e063 333 SUPERFAMILY SSF53098 187 328 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS05825 70894701fc72ea30772ea7ec2558e063 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS05825 70894701fc72ea30772ea7ec2558e063 333 Pfam PF00665 Integrase core domain 136 284 1.8E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS10470 5b7b956ee6127a313f019a7617ec0893 458 SUPERFAMILY SSF56796 18 309 6.67E-37 T 22-04-2016 RM25_RS10470 5b7b956ee6127a313f019a7617ec0893 458 Gene3D G3DSA:3.40.50.1970 18 168 4.5E-30 T 22-04-2016 RM25_RS10470 5b7b956ee6127a313f019a7617ec0893 458 Gene3D G3DSA:1.20.1090.10 170 301 2.9E-57 T 22-04-2016 RM25_RS10470 5b7b956ee6127a313f019a7617ec0893 458 Gene3D G3DSA:1.20.1090.10 379 445 2.9E-57 T 22-04-2016 RM25_RS10470 5b7b956ee6127a313f019a7617ec0893 458 PANTHER PTHR11496 18 292 1.2E-27 T 22-04-2016 RM25_RS10470 5b7b956ee6127a313f019a7617ec0893 458 Pfam PF13685 Iron-containing alcohol dehydrogenase 20 288 9.2E-58 T 22-04-2016 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|KEGG: 00630+1.1.1.26|MetaCyc: PWY-6349|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00940 RM25_RS10470 5b7b956ee6127a313f019a7617ec0893 458 PANTHER PTHR11496:SF61 18 292 1.2E-27 T 22-04-2016 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 Pfam PF00083 Sugar (and other) transporter 36 526 7.6E-94 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 PANTHER PTHR23500 232 529 5.5E-128 T 22-04-2016 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 PANTHER PTHR23500 34 192 5.5E-128 T 22-04-2016 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 PRINTS PR00171 Sugar transporter signature 131 150 9.4E-21 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 PRINTS PR00171 Sugar transporter signature 329 339 9.4E-21 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 PRINTS PR00171 Sugar transporter signature 428 449 9.4E-21 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 PRINTS PR00171 Sugar transporter signature 451 463 9.4E-21 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 PRINTS PR00171 Sugar transporter signature 43 53 9.4E-21 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 ProSitePatterns PS00217 Sugar transport proteins signature 2. 136 161 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 Gene3D G3DSA:1.20.1250.20 231 259 5.4E-24 T 22-04-2016 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 Gene3D G3DSA:1.20.1250.20 316 524 1.1E-17 T 22-04-2016 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 Gene3D G3DSA:1.20.1250.20 28 190 5.4E-24 T 22-04-2016 RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 SUPERFAMILY SSF103473 232 524 5.89E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 SUPERFAMILY SSF103473 24 191 5.89E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS08970 f88646aa6afc9d22a40cb938cd34ee10 532 ProSitePatterns PS00216 Sugar transport proteins signature 1. 94 111 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 PIRSF PIRSF001480 1 386 8.4E-88 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 PANTHER PTHR10309 1 378 4.8E-94 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 Gene3D G3DSA:2.60.120.10 233 268 2.5E-53 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 Gene3D G3DSA:2.60.120.10 1 127 2.5E-53 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 Gene3D G3DSA:2.60.120.10 283 376 1.9E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 Gene3D G3DSA:1.10.441.10 128 226 2.9E-20 T 22-04-2016 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 Gene3D G3DSA:1.10.441.10 269 282 2.9E-20 T 22-04-2016 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 Pfam PF01238 Phosphomannose isomerase type I 1 349 1.0E-55 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 SUPERFAMILY SSF51182 1 378 8.53E-80 T 22-04-2016 IPR011051 RmlC-like cupin domain RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 PRINTS PR00714 Phosphomannose isomerase type I signature 68 89 2.4E-50 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 PRINTS PR00714 Phosphomannose isomerase type I signature 215 230 2.4E-50 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 PRINTS PR00714 Phosphomannose isomerase type I signature 250 269 2.4E-50 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 PRINTS PR00714 Phosphomannose isomerase type I signature 269 288 2.4E-50 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 PRINTS PR00714 Phosphomannose isomerase type I signature 231 250 2.4E-50 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 PRINTS PR00714 Phosphomannose isomerase type I signature 24 39 2.4E-50 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 PRINTS PR00714 Phosphomannose isomerase type I signature 113 136 2.4E-50 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 PANTHER PTHR10309:SF0 1 378 4.8E-94 T 22-04-2016 RM25_RS08665 c824545d669916829db8a0a62a4d39f4 392 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 383 6.8E-64 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 RM25_RS01605 ce715ee8d8d9ce4a06424cea54020e30 435 Pfam PF01610 Transposase 164 419 9.2E-62 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS01605 ce715ee8d8d9ce4a06424cea54020e30 435 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 88 1.1E-6 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS01605 ce715ee8d8d9ce4a06424cea54020e30 435 PANTHER PTHR33498:SF1 45 434 4.0E-24 T 22-04-2016 RM25_RS01605 ce715ee8d8d9ce4a06424cea54020e30 435 PANTHER PTHR33498 45 434 4.0E-24 T 22-04-2016 RM25_RS10705 d626c36f4b03eb18a46fdcb82d7f9d2b 804 SUPERFAMILY SSF81442 281 751 2.75E-72 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RM25_RS10705 d626c36f4b03eb18a46fdcb82d7f9d2b 804 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 289 733 3.5E-62 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 Gene3D G3DSA:3.90.190.20 327 468 1.8E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 PANTHER PTHR23135 10 470 5.4E-116 T 22-04-2016 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 PANTHER PTHR23135:SF3 10 470 5.4E-116 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 SUPERFAMILY SSF53244 328 466 3.89E-31 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 28 467 8.5E-105 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 12 468 28.145 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 Pfam PF01225 Mur ligase family, catalytic domain 26 69 6.6E-8 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 Gene3D G3DSA:3.40.1390.10 25 78 5.8E-15 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 Pfam PF08245 Mur ligase middle domain 107 304 3.9E-38 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 Gene3D G3DSA:3.40.1190.10 102 321 1.0E-57 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 SUPERFAMILY SSF63418 25 91 1.01E-15 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 SUPERFAMILY SSF53623 104 321 5.23E-46 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RM25_RS07270 ea357d7beebdc2445182756206a1d887 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 416 3.8E-16 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RM25_RS05395 abcd3b270dafdadb46e3e42aff5e449f 140 PANTHER PTHR33799 2 126 2.2E-26 T 22-04-2016 RM25_RS05395 abcd3b270dafdadb46e3e42aff5e449f 140 Gene3D G3DSA:3.40.50.510 2 127 1.5E-32 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RM25_RS05395 abcd3b270dafdadb46e3e42aff5e449f 140 PANTHER PTHR33799:SF1 2 126 2.2E-26 T 22-04-2016 RM25_RS05395 abcd3b270dafdadb46e3e42aff5e449f 140 SUPERFAMILY SSF53062 2 123 6.93E-29 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RM25_RS05395 abcd3b270dafdadb46e3e42aff5e449f 140 Pfam PF03610 PTS system fructose IIA component 4 104 5.6E-22 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RM25_RS07010 caef8dd3f8f6932b0b0dca10729e5466 232 PANTHER PTHR24220:SF530 6 215 4.9E-72 T 22-04-2016 RM25_RS07010 caef8dd3f8f6932b0b0dca10729e5466 232 SMART SM00382 29 204 1.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS07010 caef8dd3f8f6932b0b0dca10729e5466 232 Pfam PF00005 ABC transporter 20 155 1.2E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS07010 caef8dd3f8f6932b0b0dca10729e5466 232 Gene3D G3DSA:3.40.50.300 2 219 2.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07010 caef8dd3f8f6932b0b0dca10729e5466 232 SUPERFAMILY SSF52540 4 219 4.17E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07010 caef8dd3f8f6932b0b0dca10729e5466 232 PANTHER PTHR24220 6 215 4.9E-72 T 22-04-2016 RM25_RS04715 e16b92c22e57cc0b71ff81a3f548cc2f 205 SUPERFAMILY SSF46955 52 135 1.17E-14 T 22-04-2016 IPR009061 Putative DNA-binding domain RM25_RS04715 e16b92c22e57cc0b71ff81a3f548cc2f 205 PANTHER PTHR30204 39 203 1.2E-39 T 22-04-2016 RM25_RS04715 e16b92c22e57cc0b71ff81a3f548cc2f 205 PANTHER PTHR30204:SF3 39 203 1.2E-39 T 22-04-2016 RM25_RS04715 e16b92c22e57cc0b71ff81a3f548cc2f 205 Pfam PF13411 MerR HTH family regulatory protein 53 118 2.3E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS04715 e16b92c22e57cc0b71ff81a3f548cc2f 205 Gene3D G3DSA:1.10.1660.10 53 125 5.0E-14 T 22-04-2016 RM25_RS04715 e16b92c22e57cc0b71ff81a3f548cc2f 205 SMART SM00422 47 119 1.4E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS10015 f47ad64457dd35ebe019f697bda1841c 351 PANTHER PTHR24220:SF429 8 239 3.1E-100 T 22-04-2016 RM25_RS10015 f47ad64457dd35ebe019f697bda1841c 351 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 14 310 9.8E-108 T 22-04-2016 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 KEGG: 00920+3.6.3.- RM25_RS10015 f47ad64457dd35ebe019f697bda1841c 351 Pfam PF00005 ABC transporter 23 165 2.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS10015 f47ad64457dd35ebe019f697bda1841c 351 SMART SM00382 31 214 1.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS10015 f47ad64457dd35ebe019f697bda1841c 351 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS10015 f47ad64457dd35ebe019f697bda1841c 351 SUPERFAMILY SSF52540 7 229 4.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10015 f47ad64457dd35ebe019f697bda1841c 351 PANTHER PTHR24220 8 239 3.1E-100 T 22-04-2016 RM25_RS10015 f47ad64457dd35ebe019f697bda1841c 351 Gene3D G3DSA:3.40.50.300 4 229 7.3E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10015 f47ad64457dd35ebe019f697bda1841c 351 Pfam PF13732 Domain of unknown function (DUF4162) 220 308 3.4E-7 T 22-04-2016 IPR025302 Domain of unknown function DUF4162 RM25_RS06555 3c0c11a167aa2bdb8cc6e2198eacb0b7 287 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 146 167 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RM25_RS06555 3c0c11a167aa2bdb8cc6e2198eacb0b7 287 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 287 32.022 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RM25_RS06555 3c0c11a167aa2bdb8cc6e2198eacb0b7 287 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 187 4.1E-52 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RM25_RS06555 3c0c11a167aa2bdb8cc6e2198eacb0b7 287 Pfam PF08029 HisG, C-terminal domain 212 282 2.4E-24 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RM25_RS06555 3c0c11a167aa2bdb8cc6e2198eacb0b7 287 Pfam PF01634 ATP phosphoribosyltransferase 54 207 8.7E-43 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RM25_RS06555 3c0c11a167aa2bdb8cc6e2198eacb0b7 287 Gene3D G3DSA:3.40.190.10 6 145 2.0E-39 T 22-04-2016 RM25_RS06555 3c0c11a167aa2bdb8cc6e2198eacb0b7 287 SUPERFAMILY SSF53850 7 212 6.79E-60 T 22-04-2016 RM25_RS06555 3c0c11a167aa2bdb8cc6e2198eacb0b7 287 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 196 286 6.1E-28 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RM25_RS06555 3c0c11a167aa2bdb8cc6e2198eacb0b7 287 SUPERFAMILY SSF54913 215 286 2.33E-20 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RM25_RS06555 3c0c11a167aa2bdb8cc6e2198eacb0b7 287 PANTHER PTHR21403 2 286 1.9E-96 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RM25_RS06555 3c0c11a167aa2bdb8cc6e2198eacb0b7 287 PANTHER PTHR21403:SF0 2 286 1.9E-96 T 22-04-2016 RM25_RS06555 3c0c11a167aa2bdb8cc6e2198eacb0b7 287 Gene3D G3DSA:3.30.70.120 215 281 4.0E-27 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RM25_RS05530 440e68694597596d4647cfbc60e340d2 236 PANTHER PTHR38814 1 236 2.2E-119 T 22-04-2016 RM25_RS05530 440e68694597596d4647cfbc60e340d2 236 Hamap MF_00722 Endonuclease NucS [nucS]. 1 228 29.83 T 22-04-2016 IPR002793 Endonuclease NucS RM25_RS05530 440e68694597596d4647cfbc60e340d2 236 PANTHER PTHR38814:SF2 1 236 2.2E-119 T 22-04-2016 RM25_RS05530 440e68694597596d4647cfbc60e340d2 236 Pfam PF01939 Protein of unknown function DUF91 1 236 3.0E-70 T 22-04-2016 IPR002793 Endonuclease NucS RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 22-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 Gene3D G3DSA:3.90.180.10 171 199 1.6E-5 T 22-04-2016 IPR011032 GroES-like RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 PIRSF PIRSF000203 1 516 4.3E-251 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 371 4.3E-72 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 SMART SM01003 4 137 1.5E-69 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 PANTHER PTHR10160 1 516 6.3E-257 T 22-04-2016 RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 434 516 1.3E-33 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 Gene3D G3DSA:3.40.50.1770 1 170 4.8E-63 T 22-04-2016 RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 SMART SM01002 146 314 2.0E-75 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 Gene3D G3DSA:3.40.50.1770 200 373 1.4E-43 T 22-04-2016 RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 2.8E-47 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 516 9.5E-220 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 SUPERFAMILY SSF51735 138 320 1.08E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10005 79f23474fba4f95dbfec8237faba9595 517 SUPERFAMILY SSF52283 1 168 5.78E-55 T 22-04-2016 RM25_RS04570 73655ca637983ff2c218470de14b4289 413 Gene3D G3DSA:1.20.1250.20 233 407 1.3E-14 T 22-04-2016 RM25_RS04570 73655ca637983ff2c218470de14b4289 413 Gene3D G3DSA:1.20.1250.20 7 206 1.5E-26 T 22-04-2016 RM25_RS04570 73655ca637983ff2c218470de14b4289 413 PANTHER PTHR23508 1 411 2.2E-87 T 22-04-2016 RM25_RS04570 73655ca637983ff2c218470de14b4289 413 Pfam PF00083 Sugar (and other) transporter 4 411 1.4E-31 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RM25_RS04570 73655ca637983ff2c218470de14b4289 413 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RM25_RS04570 73655ca637983ff2c218470de14b4289 413 SUPERFAMILY SSF103473 4 409 1.44E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS00960 25dd29ddfc7b73ebdfc3e275f9656ced 318 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 44 271 2.2E-19 T 22-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system RM25_RS00825 8afd8390d02bf008ae3b55c65e1e4bd4 817 Pfam PF02687 FtsX-like permease family 249 365 1.4E-22 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RM25_RS00825 8afd8390d02bf008ae3b55c65e1e4bd4 817 Pfam PF02687 FtsX-like permease family 691 810 8.2E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RM25_RS00825 8afd8390d02bf008ae3b55c65e1e4bd4 817 PANTHER PTHR30489:SF9 217 817 5.6E-96 T 22-04-2016 RM25_RS00825 8afd8390d02bf008ae3b55c65e1e4bd4 817 PANTHER PTHR30489:SF9 6 171 5.6E-96 T 22-04-2016 RM25_RS00825 8afd8390d02bf008ae3b55c65e1e4bd4 817 Pfam PF12704 MacB-like periplasmic core domain 13 209 1.0E-9 T 22-04-2016 IPR025857 MacB-like periplasmic core domain RM25_RS00825 8afd8390d02bf008ae3b55c65e1e4bd4 817 PANTHER PTHR30489 217 817 5.6E-96 T 22-04-2016 RM25_RS00825 8afd8390d02bf008ae3b55c65e1e4bd4 817 PANTHER PTHR30489 6 171 5.6E-96 T 22-04-2016 RM25_RS05865 765fd124e083ca893f8ed773e0f4c706 296 PANTHER PTHR22769:SF7 115 261 4.0E-39 T 22-04-2016 RM25_RS05865 765fd124e083ca893f8ed773e0f4c706 296 Gene3D G3DSA:3.90.79.10 117 289 8.7E-36 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS05865 765fd124e083ca893f8ed773e0f4c706 296 ProSitePatterns PS00893 Nudix box signature. 190 211 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RM25_RS05865 765fd124e083ca893f8ed773e0f4c706 296 Pfam PF00293 NUDIX domain 159 262 2.5E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RM25_RS05865 765fd124e083ca893f8ed773e0f4c706 296 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 123 154 2.7E-5 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 RM25_RS05865 765fd124e083ca893f8ed773e0f4c706 296 SUPERFAMILY SSF55811 111 289 2.17E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS05865 765fd124e083ca893f8ed773e0f4c706 296 PANTHER PTHR22769 115 261 4.0E-39 T 22-04-2016 RM25_RS01940 1687b4d2f5ff1c27beb51bbe224d3ee9 406 SUPERFAMILY SSF56601 250 375 2.25E-59 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS01940 1687b4d2f5ff1c27beb51bbe224d3ee9 406 SUPERFAMILY SSF56601 4 205 2.25E-59 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS01940 1687b4d2f5ff1c27beb51bbe224d3ee9 406 Pfam PF00144 Beta-lactamase 8 381 6.2E-49 T 22-04-2016 IPR001466 Beta-lactamase-related RM25_RS01940 1687b4d2f5ff1c27beb51bbe224d3ee9 406 PANTHER PTHR22935 5 373 9.2E-44 T 22-04-2016 RM25_RS01940 1687b4d2f5ff1c27beb51bbe224d3ee9 406 Gene3D G3DSA:3.40.710.10 5 379 2.1E-64 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS06450 a61f6c8d4d491b986eec77cf89ae7ec0 209 PANTHER PTHR34295 23 209 4.1E-29 T 22-04-2016 RM25_RS06450 a61f6c8d4d491b986eec77cf89ae7ec0 209 PIRSF PIRSF016661 11 203 7.7E-39 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 RM25_RS06450 a61f6c8d4d491b986eec77cf89ae7ec0 209 Pfam PF02632 BioY family 47 193 3.0E-30 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 RM25_RS03495 2ce30d833bda96eac2d032f9aee2c747 332 SUPERFAMILY SSF51604 85 300 3.28E-46 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RM25_RS03495 2ce30d833bda96eac2d032f9aee2c747 332 Pfam PF13378 Enolase C-terminal domain-like 101 298 9.1E-31 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RM25_RS03495 2ce30d833bda96eac2d032f9aee2c747 332 SMART SM00922 99 196 6.0E-21 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RM25_RS03495 2ce30d833bda96eac2d032f9aee2c747 332 Gene3D G3DSA:3.30.390.10 20 113 3.9E-38 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RM25_RS03495 2ce30d833bda96eac2d032f9aee2c747 332 PANTHER PTHR13794:SF8 84 332 3.8E-45 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 RM25_RS03495 2ce30d833bda96eac2d032f9aee2c747 332 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 17 302 22.039 T 22-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 RM25_RS03495 2ce30d833bda96eac2d032f9aee2c747 332 Gene3D G3DSA:3.20.20.120 114 286 9.2E-48 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RM25_RS03495 2ce30d833bda96eac2d032f9aee2c747 332 PANTHER PTHR13794 84 332 3.8E-45 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RM25_RS09650 db4e9d871cbf29d5e805ff5d94467511 460 Pfam PF13177 DNA polymerase III, delta subunit 83 220 1.2E-35 T 22-04-2016 RM25_RS09650 db4e9d871cbf29d5e805ff5d94467511 460 SMART SM00382 84 222 0.0015 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09650 db4e9d871cbf29d5e805ff5d94467511 460 PANTHER PTHR11669:SF8 10 58 2.0E-55 T 22-04-2016 RM25_RS09650 db4e9d871cbf29d5e805ff5d94467511 460 PANTHER PTHR11669:SF8 84 264 2.0E-55 T 22-04-2016 RM25_RS09650 db4e9d871cbf29d5e805ff5d94467511 460 PANTHER PTHR11669 10 58 2.0E-55 T 22-04-2016 RM25_RS09650 db4e9d871cbf29d5e805ff5d94467511 460 PANTHER PTHR11669 84 264 2.0E-55 T 22-04-2016 RM25_RS09650 db4e9d871cbf29d5e805ff5d94467511 460 Gene3D G3DSA:3.40.50.300 37 221 2.0E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09650 db4e9d871cbf29d5e805ff5d94467511 460 SUPERFAMILY SSF52540 37 261 3.05E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07615 5c0bab43ce4e764cb176dd033005804d 363 SUPERFAMILY SSF53383 20 361 2.31E-77 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS07615 5c0bab43ce4e764cb176dd033005804d 363 TIGRFAM TIGR03539 DapC_actino: succinyldiaminopimelate transaminase 7 362 5.6E-165 T 22-04-2016 IPR019880 Succinyldiaminopimelate transaminase, DapC, actinobacteria RM25_RS07615 5c0bab43ce4e764cb176dd033005804d 363 PANTHER PTHR11751:SF354 11 363 4.7E-114 T 22-04-2016 RM25_RS07615 5c0bab43ce4e764cb176dd033005804d 363 Pfam PF00155 Aminotransferase class I and II 29 361 5.4E-44 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RM25_RS07615 5c0bab43ce4e764cb176dd033005804d 363 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 219 232 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RM25_RS07615 5c0bab43ce4e764cb176dd033005804d 363 Gene3D G3DSA:3.90.1150.10 240 362 3.2E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS07615 5c0bab43ce4e764cb176dd033005804d 363 Gene3D G3DSA:3.40.640.10 42 239 6.5E-39 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS07615 5c0bab43ce4e764cb176dd033005804d 363 PANTHER PTHR11751 11 363 4.7E-114 T 22-04-2016 RM25_RS05110 a403988090ec1ed4bbd1c105de91d50c 410 Gene3D G3DSA:3.30.160.60 368 402 7.1E-5 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 RM25_RS05110 a403988090ec1ed4bbd1c105de91d50c 410 Pfam PF02618 YceG-like family 107 396 2.1E-75 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RM25_RS05110 a403988090ec1ed4bbd1c105de91d50c 410 PANTHER PTHR30518 54 409 6.2E-82 T 22-04-2016 RM25_RS05110 a403988090ec1ed4bbd1c105de91d50c 410 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 69 402 4.3E-59 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RM25_RS05110 a403988090ec1ed4bbd1c105de91d50c 410 PANTHER PTHR30518:SF2 54 409 6.2E-82 T 22-04-2016 RM25_RS09125 228bda195205538fbf848888acaf8315 79 PANTHER PTHR38839:SF3 3 70 6.6E-24 T 22-04-2016 RM25_RS09125 228bda195205538fbf848888acaf8315 79 Pfam PF02467 Transcription factor WhiB 3 53 2.3E-20 T 22-04-2016 IPR003482 Transcription factor WhiB RM25_RS09125 228bda195205538fbf848888acaf8315 79 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 60 11.595 T 22-04-2016 IPR003482 Transcription factor WhiB RM25_RS09125 228bda195205538fbf848888acaf8315 79 PANTHER PTHR38839 3 70 6.6E-24 T 22-04-2016 RM25_RS05160 e8f286e8537b32c8a3362f50bffc6ed9 206 ProSitePatterns PS00856 Guanylate kinase-like signature. 61 78 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RM25_RS05160 e8f286e8537b32c8a3362f50bffc6ed9 206 Gene3D G3DSA:3.30.63.10 73 108 3.9E-23 T 22-04-2016 RM25_RS05160 e8f286e8537b32c8a3362f50bffc6ed9 206 SMART SM00072 26 205 1.8E-56 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RM25_RS05160 e8f286e8537b32c8a3362f50bffc6ed9 206 SUPERFAMILY SSF52540 27 204 2.91E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05160 e8f286e8537b32c8a3362f50bffc6ed9 206 PANTHER PTHR23117 14 206 4.9E-77 T 22-04-2016 RM25_RS05160 e8f286e8537b32c8a3362f50bffc6ed9 206 Pfam PF00625 Guanylate kinase 27 204 3.8E-39 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RM25_RS05160 e8f286e8537b32c8a3362f50bffc6ed9 206 PANTHER PTHR23117:SF13 14 206 4.9E-77 T 22-04-2016 RM25_RS05160 e8f286e8537b32c8a3362f50bffc6ed9 206 Gene3D G3DSA:3.40.50.300 39 72 6.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05160 e8f286e8537b32c8a3362f50bffc6ed9 206 Gene3D G3DSA:3.40.50.300 26 38 8.8E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05160 e8f286e8537b32c8a3362f50bffc6ed9 206 Gene3D G3DSA:3.40.50.300 109 204 8.8E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05160 e8f286e8537b32c8a3362f50bffc6ed9 206 Hamap MF_00328 Guanylate kinase [gmk]. 25 205 32.901 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RM25_RS05160 e8f286e8537b32c8a3362f50bffc6ed9 206 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 28 204 3.4E-66 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RM25_RS02295 090812a475a786c65f0f52c80741007e 78 Pfam PF13396 Phospholipase_D-nuclease N-terminal 6 51 1.2E-11 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal RM25_RS09560 2880760fc1bc2f161305a376620ad881 183 PANTHER PTHR22573 1 183 1.7E-70 T 22-04-2016 RM25_RS09560 2880760fc1bc2f161305a376620ad881 183 Gene3D G3DSA:3.40.50.2020 4 182 5.5E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS09560 2880760fc1bc2f161305a376620ad881 183 SUPERFAMILY SSF53271 3 182 6.82E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS09560 2880760fc1bc2f161305a376620ad881 183 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 13 177 2.5E-58 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 RM25_RS09560 2880760fc1bc2f161305a376620ad881 183 PANTHER PTHR22573:SF56 1 183 1.7E-70 T 22-04-2016 RM25_RS09560 2880760fc1bc2f161305a376620ad881 183 Pfam PF00156 Phosphoribosyl transferase domain 20 164 1.8E-21 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RM25_RS07135 39ac86f2e8f5e3c95d8711b6f3b00594 248 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 25 160 4.2E-17 T 22-04-2016 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 RM25_RS07135 39ac86f2e8f5e3c95d8711b6f3b00594 248 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 25 228 2.9E-20 T 22-04-2016 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type RM25_RS07135 39ac86f2e8f5e3c95d8711b6f3b00594 248 SUPERFAMILY SSF109854 24 163 5.04E-25 T 22-04-2016 RM25_RS01460 487986b15e489bd2ea9130c99d380cf0 242 Pfam PF00072 Response regulator receiver domain 20 129 7.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS01460 487986b15e489bd2ea9130c99d380cf0 242 Gene3D G3DSA:3.40.50.2300 11 139 1.1E-40 T 22-04-2016 RM25_RS01460 487986b15e489bd2ea9130c99d380cf0 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 239 3.6E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS01460 487986b15e489bd2ea9130c99d380cf0 242 PANTHER PTHR26402 18 242 3.5E-99 T 22-04-2016 RM25_RS01460 487986b15e489bd2ea9130c99d380cf0 242 SMART SM00448 18 129 3.1E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS01460 487986b15e489bd2ea9130c99d380cf0 242 Gene3D G3DSA:1.10.10.10 142 241 3.2E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS01460 487986b15e489bd2ea9130c99d380cf0 242 SUPERFAMILY SSF52172 16 195 8.0E-40 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS01460 487986b15e489bd2ea9130c99d380cf0 242 SMART SM00862 165 239 3.7E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS01460 487986b15e489bd2ea9130c99d380cf0 242 PANTHER PTHR26402:SF316 18 242 3.5E-99 T 22-04-2016 RM25_RS00205 dcfed18c2063299301f3a379e88feab2 579 PANTHER PTHR24221:SF161 22 579 1.6E-74 T 22-04-2016 RM25_RS00205 dcfed18c2063299301f3a379e88feab2 579 Gene3D G3DSA:3.40.50.300 360 571 4.3E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00205 dcfed18c2063299301f3a379e88feab2 579 Pfam PF00664 ABC transporter transmembrane region 36 292 1.1E-18 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS00205 dcfed18c2063299301f3a379e88feab2 579 PANTHER PTHR24221 22 579 1.6E-74 T 22-04-2016 RM25_RS00205 dcfed18c2063299301f3a379e88feab2 579 SUPERFAMILY SSF52540 362 572 7.54E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00205 dcfed18c2063299301f3a379e88feab2 579 Pfam PF00005 ABC transporter 363 510 7.5E-12 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS00205 dcfed18c2063299301f3a379e88feab2 579 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS00205 dcfed18c2063299301f3a379e88feab2 579 Gene3D G3DSA:1.20.1560.10 22 331 9.1E-42 T 22-04-2016 RM25_RS00205 dcfed18c2063299301f3a379e88feab2 579 SUPERFAMILY SSF90123 23 331 6.93E-42 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS07480 6b7dcbf23f562eedfd6cf2b7fec135aa 169 Gene3D G3DSA:1.10.357.10 42 166 1.9E-30 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS07480 6b7dcbf23f562eedfd6cf2b7fec135aa 169 Gene3D G3DSA:1.10.10.60 1 37 8.4E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS07480 6b7dcbf23f562eedfd6cf2b7fec135aa 169 SUPERFAMILY SSF48498 46 166 2.78E-21 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RM25_RS07480 6b7dcbf23f562eedfd6cf2b7fec135aa 169 PANTHER PTHR30055 1 100 2.5E-16 T 22-04-2016 RM25_RS07480 6b7dcbf23f562eedfd6cf2b7fec135aa 169 SUPERFAMILY SSF46689 1 36 2.41E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS07480 6b7dcbf23f562eedfd6cf2b7fec135aa 169 PANTHER PTHR30055:SF36 1 100 2.5E-16 T 22-04-2016 RM25_RS07480 6b7dcbf23f562eedfd6cf2b7fec135aa 169 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 47 133 5.4E-12 T 22-04-2016 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 RM25_RS08690 9833304d92d9316d1ad7b0cd4caeabe6 169 PANTHER PTHR11106 3 168 7.2E-70 T 22-04-2016 RM25_RS08690 9833304d92d9316d1ad7b0cd4caeabe6 169 SUPERFAMILY SSF52949 2 168 9.59E-55 T 22-04-2016 RM25_RS08690 9833304d92d9316d1ad7b0cd4caeabe6 169 SMART SM00506 2 136 2.1E-51 T 22-04-2016 IPR002589 Macro domain RM25_RS08690 9833304d92d9316d1ad7b0cd4caeabe6 169 Gene3D G3DSA:3.40.220.10 2 168 1.0E-60 T 22-04-2016 RM25_RS08690 9833304d92d9316d1ad7b0cd4caeabe6 169 Pfam PF01661 Macro domain 19 136 4.3E-40 T 22-04-2016 IPR002589 Macro domain RM25_RS09065 652cb59c16afa1ecce8b99b95bfcfe87 337 PANTHER PTHR12304 1 336 7.8E-70 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase RM25_RS09065 652cb59c16afa1ecce8b99b95bfcfe87 337 Gene3D G3DSA:3.90.245.10 2 335 6.2E-88 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RM25_RS09065 652cb59c16afa1ecce8b99b95bfcfe87 337 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 324 6.1E-64 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RM25_RS09065 652cb59c16afa1ecce8b99b95bfcfe87 337 SUPERFAMILY SSF53590 1 333 9.81E-76 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RM25_RS03165 38d43ed05136930331a225cbae282646 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 120 2.3E-32 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RM25_RS03165 38d43ed05136930331a225cbae282646 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 35.132 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RM25_RS03165 38d43ed05136930331a225cbae282646 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 125 280 2.7E-60 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RM25_RS03165 38d43ed05136930331a225cbae282646 286 SUPERFAMILY SSF51735 125 278 6.88E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS03165 38d43ed05136930331a225cbae282646 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.9E-58 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RM25_RS03165 38d43ed05136930331a225cbae282646 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 205 234 1.9E-58 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RM25_RS03165 38d43ed05136930331a225cbae282646 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.9E-58 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RM25_RS03165 38d43ed05136930331a225cbae282646 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.9E-58 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RM25_RS03165 38d43ed05136930331a225cbae282646 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.9E-58 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RM25_RS03165 38d43ed05136930331a225cbae282646 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.9E-58 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RM25_RS03165 38d43ed05136930331a225cbae282646 286 PANTHER PTHR10025 1 286 4.5E-119 T 22-04-2016 RM25_RS03165 38d43ed05136930331a225cbae282646 286 Gene3D G3DSA:3.40.50.720 139 263 3.3E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS03165 38d43ed05136930331a225cbae282646 286 SUPERFAMILY SSF53223 1 121 2.01E-34 T 22-04-2016 RM25_RS03165 38d43ed05136930331a225cbae282646 286 Gene3D G3DSA:3.40.192.10 7 138 3.7E-39 T 22-04-2016 RM25_RS08830 d89ae43ed310fba421a0e13a32e3f9d5 247 Pfam PF00106 short chain dehydrogenase 7 182 5.0E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS08830 d89ae43ed310fba421a0e13a32e3f9d5 247 PANTHER PTHR24319:SF32 7 234 4.5E-80 T 22-04-2016 RM25_RS08830 d89ae43ed310fba421a0e13a32e3f9d5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 5.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS08830 d89ae43ed310fba421a0e13a32e3f9d5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 5.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS08830 d89ae43ed310fba421a0e13a32e3f9d5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 5.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS08830 d89ae43ed310fba421a0e13a32e3f9d5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS08830 d89ae43ed310fba421a0e13a32e3f9d5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 5.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS08830 d89ae43ed310fba421a0e13a32e3f9d5 247 PANTHER PTHR24319 7 234 4.5E-80 T 22-04-2016 RM25_RS08830 d89ae43ed310fba421a0e13a32e3f9d5 247 Gene3D G3DSA:3.40.50.720 7 233 5.4E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08830 d89ae43ed310fba421a0e13a32e3f9d5 247 SUPERFAMILY SSF51735 6 236 6.55E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08215 55141b567d2ae7a3333d51bf34a0aabc 177 Pfam PF00582 Universal stress protein family 21 166 3.6E-9 T 22-04-2016 IPR006016 UspA GO:0006950 RM25_RS08215 55141b567d2ae7a3333d51bf34a0aabc 177 Gene3D G3DSA:3.40.50.620 29 166 4.2E-12 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS08215 55141b567d2ae7a3333d51bf34a0aabc 177 SUPERFAMILY SSF52402 28 166 1.84E-13 T 22-04-2016 RM25_RS10440 528cbe9906dc6652035b6ca0e12413ac 269 Pfam PF13427 Domain of unknown function (DUF4111) 132 224 6.9E-16 T 22-04-2016 IPR025184 Domain of unknown function DUF4111 RM25_RS00430 febb36b3e5e4bb9aa12048223c2baa3b 313 SUPERFAMILY SSF51445 161 290 3.79E-21 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS00430 febb36b3e5e4bb9aa12048223c2baa3b 313 Gene3D G3DSA:3.20.20.80 161 288 3.4E-32 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS00430 febb36b3e5e4bb9aa12048223c2baa3b 313 SUPERFAMILY SSF47090 96 153 3.14E-5 T 22-04-2016 IPR002477 Peptidoglycan binding-like RM25_RS00430 febb36b3e5e4bb9aa12048223c2baa3b 313 Pfam PF08924 Domain of unknown function (DUF1906) 173 288 4.1E-30 T 22-04-2016 IPR015020 Protein of unknown function DUF1906 RM25_RS04530 7131af9f7308f7c9e854b7774a1ee76a 215 PANTHER PTHR16254:SF23 1 153 3.4E-73 T 22-04-2016 RM25_RS04530 7131af9f7308f7c9e854b7774a1ee76a 215 SUPERFAMILY SSF51735 2 135 3.35E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04530 7131af9f7308f7c9e854b7774a1ee76a 215 Pfam PF02254 TrkA-N domain 1 111 7.7E-22 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RM25_RS04530 7131af9f7308f7c9e854b7774a1ee76a 215 Gene3D G3DSA:3.40.50.720 1 134 3.0E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04530 7131af9f7308f7c9e854b7774a1ee76a 215 Gene3D G3DSA:3.40.50.720 180 210 1.4E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04530 7131af9f7308f7c9e854b7774a1ee76a 215 SUPERFAMILY SSF116726 141 206 2.35E-5 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RM25_RS04530 7131af9f7308f7c9e854b7774a1ee76a 215 PANTHER PTHR16254 1 153 3.4E-73 T 22-04-2016 RM25_RS04530 7131af9f7308f7c9e854b7774a1ee76a 215 Pfam PF02080 TrkA-C domain 144 206 6.8E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RM25_RS07590 f24feb1d30ac1565f0a33dd4fb6ac069 482 PANTHER PTHR11689 38 469 2.4E-67 T 22-04-2016 RM25_RS07590 f24feb1d30ac1565f0a33dd4fb6ac069 482 PRINTS PR00762 Chloride channel signature 425 444 2.4E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RM25_RS07590 f24feb1d30ac1565f0a33dd4fb6ac069 482 PRINTS PR00762 Chloride channel signature 407 423 2.4E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RM25_RS07590 f24feb1d30ac1565f0a33dd4fb6ac069 482 PRINTS PR00762 Chloride channel signature 373 393 2.4E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RM25_RS07590 f24feb1d30ac1565f0a33dd4fb6ac069 482 PRINTS PR00762 Chloride channel signature 153 172 2.4E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RM25_RS07590 f24feb1d30ac1565f0a33dd4fb6ac069 482 PRINTS PR00762 Chloride channel signature 204 223 2.4E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RM25_RS07590 f24feb1d30ac1565f0a33dd4fb6ac069 482 Pfam PF00654 Voltage gated chloride channel 112 456 2.5E-81 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RM25_RS07590 f24feb1d30ac1565f0a33dd4fb6ac069 482 PANTHER PTHR11689:SF14 38 469 2.4E-67 T 22-04-2016 RM25_RS07590 f24feb1d30ac1565f0a33dd4fb6ac069 482 SUPERFAMILY SSF81340 37 470 7.72E-90 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RM25_RS07590 f24feb1d30ac1565f0a33dd4fb6ac069 482 Gene3D G3DSA:1.10.3080.10 37 468 4.5E-71 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RM25_RS00570 ac5047c500ffd260e6828abc6e3bcfc9 336 PANTHER PTHR30004:SF3 1 333 2.4E-108 T 22-04-2016 RM25_RS00570 ac5047c500ffd260e6828abc6e3bcfc9 336 SUPERFAMILY SSF53659 4 318 5.15E-76 T 22-04-2016 RM25_RS00570 ac5047c500ffd260e6828abc6e3bcfc9 336 Gene3D G3DSA:3.40.718.10 2 323 6.1E-83 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RM25_RS00570 ac5047c500ffd260e6828abc6e3bcfc9 336 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 321 27.283 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RM25_RS00570 ac5047c500ffd260e6828abc6e3bcfc9 336 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 76 317 1.2E-72 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RM25_RS00570 ac5047c500ffd260e6828abc6e3bcfc9 336 PANTHER PTHR30004 1 333 2.4E-108 T 22-04-2016 RM25_RS02930 d32731f54a05afb8fd7cbd81c0f5d973 173 PANTHER PTHR23091 4 161 7.1E-24 T 22-04-2016 RM25_RS02930 d32731f54a05afb8fd7cbd81c0f5d973 173 SUPERFAMILY SSF55729 15 156 1.11E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS02930 d32731f54a05afb8fd7cbd81c0f5d973 173 Gene3D G3DSA:3.40.630.30 4 146 2.7E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS02930 d32731f54a05afb8fd7cbd81c0f5d973 173 Pfam PF00583 Acetyltransferase (GNAT) family 60 133 9.8E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS07085 d43b630937b9a719f56ce1530f465e91 327 Pfam PF02650 WhiA C-terminal HTH domain 221 303 6.5E-19 T 22-04-2016 IPR023054 Sporulation regulator WhiA, C-terminal RM25_RS07085 d43b630937b9a719f56ce1530f465e91 327 Pfam PF14527 WhiA LAGLIDADG-like domain 128 218 2.1E-25 T 22-04-2016 RM25_RS07085 d43b630937b9a719f56ce1530f465e91 327 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 20 104 1.5E-24 T 22-04-2016 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain RM25_RS07085 d43b630937b9a719f56ce1530f465e91 327 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 304 6.2E-102 T 22-04-2016 RM25_RS07085 d43b630937b9a719f56ce1530f465e91 327 PANTHER PTHR37307 2 322 1.1E-106 T 22-04-2016 RM25_RS07085 d43b630937b9a719f56ce1530f465e91 327 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 306 29.44 T 22-04-2016 IPR003802 Sporulation regulator WhiA GO:0043937 RM25_RS07955 495c0c0a1b5f209a3df6be8a0149ebaf 308 TIGRFAM TIGR03446 mycothiol_Mca: mycothiol conjugate amidase Mca 13 293 4.6E-136 T 22-04-2016 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 KEGG: 00311+3.5.1.11 RM25_RS07955 495c0c0a1b5f209a3df6be8a0149ebaf 308 SUPERFAMILY SSF102588 12 294 9.02E-73 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain RM25_RS07955 495c0c0a1b5f209a3df6be8a0149ebaf 308 Hamap MF_01482 Mycothiol S-conjugate amidase [mca]. 13 294 60.025 T 22-04-2016 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 KEGG: 00311+3.5.1.11 RM25_RS07955 495c0c0a1b5f209a3df6be8a0149ebaf 308 Pfam PF02585 GlcNAc-PI de-N-acetylase 17 161 6.2E-23 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RM25_RS07955 495c0c0a1b5f209a3df6be8a0149ebaf 308 PANTHER PTHR12993 13 304 2.8E-109 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RM25_RS07955 495c0c0a1b5f209a3df6be8a0149ebaf 308 Gene3D G3DSA:3.40.50.10320 12 294 3.0E-83 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain RM25_RS07955 495c0c0a1b5f209a3df6be8a0149ebaf 308 PANTHER PTHR12993:SF12 13 304 2.8E-109 T 22-04-2016 RM25_RS08305 a4a597d3c73c26c37783985182a187d0 374 SUPERFAMILY SSF55874 278 352 6.38E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS08305 a4a597d3c73c26c37783985182a187d0 374 PANTHER PTHR24421:SF26 55 372 1.1E-44 T 22-04-2016 RM25_RS08305 a4a597d3c73c26c37783985182a187d0 374 PANTHER PTHR24421 55 372 1.1E-44 T 22-04-2016 RM25_RS08305 a4a597d3c73c26c37783985182a187d0 374 Pfam PF07730 Histidine kinase 172 235 2.8E-13 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RM25_RS08250 f08d7e6446d844ecfcb3b58a2d81bf39 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 54 2.6E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS08250 f08d7e6446d844ecfcb3b58a2d81bf39 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.4E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS08250 f08d7e6446d844ecfcb3b58a2d81bf39 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.4E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS08250 f08d7e6446d844ecfcb3b58a2d81bf39 193 Gene3D G3DSA:1.10.357.10 55 185 1.3E-14 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS08250 f08d7e6446d844ecfcb3b58a2d81bf39 193 SUPERFAMILY SSF46689 2 61 3.24E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS08250 f08d7e6446d844ecfcb3b58a2d81bf39 193 Gene3D G3DSA:1.10.10.60 10 54 2.9E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS08250 f08d7e6446d844ecfcb3b58a2d81bf39 193 PANTHER PTHR30055 1 183 4.1E-16 T 22-04-2016 RM25_RS08250 f08d7e6446d844ecfcb3b58a2d81bf39 193 PANTHER PTHR30055:SF10 1 183 4.1E-16 T 22-04-2016 RM25_RS06505 8758c0c42d88301698af4ba3d8b94ee7 383 Pfam PF01960 ArgJ family 11 383 1.4E-128 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RM25_RS06505 8758c0c42d88301698af4ba3d8b94ee7 383 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 17 381 1.0E-126 T 22-04-2016 RM25_RS06505 8758c0c42d88301698af4ba3d8b94ee7 383 Gene3D G3DSA:3.60.70.12 2 259 1.2E-93 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RM25_RS06505 8758c0c42d88301698af4ba3d8b94ee7 383 PANTHER PTHR23100 2 383 6.9E-151 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RM25_RS06505 8758c0c42d88301698af4ba3d8b94ee7 383 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 383 129.431 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RM25_RS06505 8758c0c42d88301698af4ba3d8b94ee7 383 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 2 382 1.5E-108 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RM25_RS06505 8758c0c42d88301698af4ba3d8b94ee7 383 PANTHER PTHR23100:SF0 2 383 6.9E-151 T 22-04-2016 RM25_RS06505 8758c0c42d88301698af4ba3d8b94ee7 383 SUPERFAMILY SSF56266 6 380 3.14E-128 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RM25_RS04405 8cbca673e36bd3eabea9cef6f2fc8f23 436 Pfam PF00890 FAD binding domain 3 412 2.5E-32 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RM25_RS04405 8cbca673e36bd3eabea9cef6f2fc8f23 436 SUPERFAMILY SSF51905 261 333 8.48E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS04405 8cbca673e36bd3eabea9cef6f2fc8f23 436 SUPERFAMILY SSF51905 360 431 8.48E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS04405 8cbca673e36bd3eabea9cef6f2fc8f23 436 SUPERFAMILY SSF51905 1 81 8.48E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS04405 8cbca673e36bd3eabea9cef6f2fc8f23 436 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 428 2.1E-59 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 RM25_RS04405 8cbca673e36bd3eabea9cef6f2fc8f23 436 PIRSF PIRSF000141 1 433 2.1E-77 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 RM25_RS04405 8cbca673e36bd3eabea9cef6f2fc8f23 436 Gene3D G3DSA:3.50.50.60 3 104 6.0E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS04405 8cbca673e36bd3eabea9cef6f2fc8f23 436 Gene3D G3DSA:3.50.50.60 262 432 6.0E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS02495 53cec9a01f02423e4c6f3421aa36545b 377 PANTHER PTHR21071 13 377 3.7E-118 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS02495 53cec9a01f02423e4c6f3421aa36545b 377 Pfam PF01565 FAD binding domain 48 172 3.8E-17 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RM25_RS02495 53cec9a01f02423e4c6f3421aa36545b 377 Gene3D G3DSA:3.90.78.10 276 376 1.8E-45 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS02495 53cec9a01f02423e4c6f3421aa36545b 377 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 377 75.813 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS02495 53cec9a01f02423e4c6f3421aa36545b 377 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 35 369 2.6E-50 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS02495 53cec9a01f02423e4c6f3421aa36545b 377 Gene3D G3DSA:3.30.465.10 109 225 9.6E-46 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RM25_RS02495 53cec9a01f02423e4c6f3421aa36545b 377 Gene3D G3DSA:3.30.465.10 259 275 9.6E-46 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RM25_RS02495 53cec9a01f02423e4c6f3421aa36545b 377 Gene3D G3DSA:3.30.43.10 35 98 5.3E-22 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RM25_RS02495 53cec9a01f02423e4c6f3421aa36545b 377 SUPERFAMILY SSF56194 245 375 4.58E-36 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS02495 53cec9a01f02423e4c6f3421aa36545b 377 PANTHER PTHR21071:SF6 13 377 3.7E-118 T 22-04-2016 RM25_RS02495 53cec9a01f02423e4c6f3421aa36545b 377 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 247 373 9.3E-41 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RM25_RS02495 53cec9a01f02423e4c6f3421aa36545b 377 SUPERFAMILY SSF56176 35 219 9.35E-33 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RM25_RS06795 04ee7364f0d928d666649508a71aaf6c 87 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 8 86 3.0E-35 T 22-04-2016 RM25_RS06795 04ee7364f0d928d666649508a71aaf6c 87 SMART SM01387 6 86 1.2E-50 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06795 04ee7364f0d928d666649508a71aaf6c 87 Pfam PF00312 Ribosomal protein S15 6 86 1.2E-36 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06795 04ee7364f0d928d666649508a71aaf6c 87 ProSitePatterns PS00362 Ribosomal protein S15 signature. 37 67 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06795 04ee7364f0d928d666649508a71aaf6c 87 Gene3D G3DSA:1.10.287.10 2 87 6.2E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RM25_RS06795 04ee7364f0d928d666649508a71aaf6c 87 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 87 5.9E-39 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RM25_RS06795 04ee7364f0d928d666649508a71aaf6c 87 PANTHER PTHR23321 1 87 3.7E-39 T 22-04-2016 RM25_RS06795 04ee7364f0d928d666649508a71aaf6c 87 SUPERFAMILY SSF47060 2 87 1.62E-34 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RM25_RS06795 04ee7364f0d928d666649508a71aaf6c 87 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 87 21.933 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RM25_RS10745 0946aae98545f2c59bd319a0383fd35e 174 Pfam PF13276 HTH-like domain 21 77 1.6E-11 T 22-04-2016 IPR025948 HTH-like domain RM25_RS10745 0946aae98545f2c59bd319a0383fd35e 174 Gene3D G3DSA:3.30.420.10 95 173 4.4E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10745 0946aae98545f2c59bd319a0383fd35e 174 SUPERFAMILY SSF53098 95 173 7.21E-16 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10745 0946aae98545f2c59bd319a0383fd35e 174 Pfam PF00665 Integrase core domain 101 173 4.7E-14 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS10745 0946aae98545f2c59bd319a0383fd35e 174 PANTHER PTHR32552 1 159 2.6E-32 T 22-04-2016 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 SUPERFAMILY SSF54211 4 202 1.67E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 Gene3D G3DSA:3.30.230.10 6 213 3.1E-60 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 Pfam PF00288 GHMP kinases N terminal domain 112 183 4.3E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 PIRSF PIRSF000530 2 386 2.3E-99 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 Gene3D G3DSA:3.30.70.890 214 383 4.8E-47 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 PRINTS PR00959 Mevalonate kinase family signature 116 138 1.7E-29 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 PRINTS PR00959 Mevalonate kinase family signature 164 183 1.7E-29 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 PRINTS PR00959 Mevalonate kinase family signature 332 349 1.7E-29 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 PRINTS PR00959 Mevalonate kinase family signature 24 48 1.7E-29 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 Pfam PF10509 Galactokinase galactose-binding signature 10 56 3.1E-17 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 Pfam PF08544 GHMP kinases C terminal 284 364 2.0E-11 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 PRINTS PR00473 Galactokinase signature 89 100 5.7E-19 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 PRINTS PR00473 Galactokinase signature 26 44 5.7E-19 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 PRINTS PR00473 Galactokinase signature 269 283 5.7E-19 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 PRINTS PR00473 Galactokinase signature 109 127 5.7E-19 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 TIGRFAM TIGR00131 gal_kin: galactokinase 6 367 9.5E-69 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 PANTHER PTHR10457 6 384 9.1E-92 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 RM25_RS09235 4cf11b92cc6586083b93b77b52fd156d 387 SUPERFAMILY SSF55060 211 368 7.56E-44 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RM25_RS06675 c1ff67deb5b2b5a374dd299478503306 241 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 2.7E-72 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RM25_RS06675 c1ff67deb5b2b5a374dd299478503306 241 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 230 1.2E-60 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RM25_RS06675 c1ff67deb5b2b5a374dd299478503306 241 SUPERFAMILY SSF75217 1 236 7.85E-86 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RM25_RS06675 c1ff67deb5b2b5a374dd299478503306 241 PANTHER PTHR32125 1 237 3.3E-98 T 22-04-2016 RM25_RS06675 c1ff67deb5b2b5a374dd299478503306 241 Gene3D G3DSA:3.40.1280.10 1 166 5.1E-66 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RM25_RS06675 c1ff67deb5b2b5a374dd299478503306 241 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 241 96.33 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RM25_RS06675 c1ff67deb5b2b5a374dd299478503306 241 PIRSF PIRSF000386 1 240 1.2E-87 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RM25_RS06675 c1ff67deb5b2b5a374dd299478503306 241 Gene3D G3DSA:1.10.1270.20 167 236 1.9E-24 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RM25_RS06675 c1ff67deb5b2b5a374dd299478503306 241 PANTHER PTHR32125:SF1 1 237 3.3E-98 T 22-04-2016 RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 39 114 1.4E-16 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 SUPERFAMILY SSF51445 157 521 9.78E-105 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 6 629 40.235 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 Gene3D G3DSA:2.60.40.1180 527 628 1.9E-25 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 Gene3D G3DSA:3.20.20.80 153 513 6.0E-86 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 PANTHER PTHR10357:SF160 6 628 1.3E-286 T 22-04-2016 RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 532 628 9.5E-15 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 SUPERFAMILY SSF81296 25 129 4.9E-24 T 22-04-2016 IPR014756 Immunoglobulin E-set RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 PANTHER PTHR10357 6 628 1.3E-286 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 Pfam PF00128 Alpha amylase, catalytic domain 176 247 1.3E-11 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 16 627 1.4E-249 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 Gene3D G3DSA:2.60.40.10 18 128 1.2E-27 T 22-04-2016 IPR013783 Immunoglobulin-like fold RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 SUPERFAMILY SSF51011 527 629 9.53E-22 T 22-04-2016 RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 SMART SM00642 159 514 2.3E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RM25_RS05495 66e61feaa47e1aea9ee00c48f1ef1205 635 PIRSF PIRSF000463 3 635 7.7E-256 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 RM25_RS10225 ebbd75e0469e122d1bf3042826610392 218 PANTHER PTHR30614 1 218 4.8E-64 T 22-04-2016 RM25_RS10225 ebbd75e0469e122d1bf3042826610392 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 109 3.1E-23 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RM25_RS10225 ebbd75e0469e122d1bf3042826610392 218 SUPERFAMILY SSF161098 13 200 1.57E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10225 ebbd75e0469e122d1bf3042826610392 218 Gene3D G3DSA:1.10.3720.10 10 214 9.5E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10225 ebbd75e0469e122d1bf3042826610392 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 214 8.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10650 de446543396815961264e4d4edc2b60f 67 Gene3D G3DSA:1.10.10.60 1 54 3.1E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10650 de446543396815961264e4d4edc2b60f 67 Pfam PF01527 Transposase 3 51 1.0E-8 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RM25_RS10650 de446543396815961264e4d4edc2b60f 67 SUPERFAMILY SSF46689 2 53 1.51E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10490 144d2945d16f390336a2f969022c2120 162 TIGRFAM TIGR02133 RPI_actino: ribose 5-phosphate isomerase 4 150 1.1E-50 T 22-04-2016 IPR011860 Ribose 5-phosphate isomerase GO:0004751 RM25_RS10490 144d2945d16f390336a2f969022c2120 162 PANTHER PTHR30345 1 151 1.3E-59 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS10490 144d2945d16f390336a2f969022c2120 162 Gene3D G3DSA:3.40.1400.10 3 152 1.9E-45 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS10490 144d2945d16f390336a2f969022c2120 162 SUPERFAMILY SSF89623 3 149 3.53E-45 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS10490 144d2945d16f390336a2f969022c2120 162 Pfam PF02502 Ribose/Galactose Isomerase 5 143 2.2E-40 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS10490 144d2945d16f390336a2f969022c2120 162 PIRSF PIRSF005384 3 152 2.2E-40 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS10490 144d2945d16f390336a2f969022c2120 162 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 5 151 8.8E-32 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 Gene3D G3DSA:3.40.50.970 914 1116 2.6E-18 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 PANTHER PTHR23152 353 1261 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 SUPERFAMILY SSF52777 127 368 1.78E-55 T 22-04-2016 RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 SUPERFAMILY SSF52518 481 844 1.9E-77 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 6 39 2.3E-9 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 Gene3D G3DSA:3.30.559.10 125 368 4.0E-54 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 Pfam PF00676 Dehydrogenase E1 component 530 840 1.5E-51 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 134 368 2.6E-51 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 Gene3D G3DSA:3.40.50.970 479 853 2.9E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 SUPERFAMILY SSF52518 912 1119 9.81E-40 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 396 1256 1.5E-276 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 PANTHER PTHR23152:SF4 353 1261 0.0 T 22-04-2016 RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 SMART SM00861 914 1107 6.6E-43 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 Pfam PF02779 Transketolase, pyrimidine binding domain 914 1107 2.6E-52 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 1112 1257 1.4E-34 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RM25_RS05675 62758cfb0785334c9bfbf4e401f3748c 1261 PIRSF PIRSF000157 1 1260 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RM25_RS00840 66cd4fff3d13e758ea3c8efe54949bc2 439 PANTHER PTHR24421:SF26 48 423 3.1E-80 T 22-04-2016 RM25_RS00840 66cd4fff3d13e758ea3c8efe54949bc2 439 SUPERFAMILY SSF55874 286 406 1.37E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS00840 66cd4fff3d13e758ea3c8efe54949bc2 439 PANTHER PTHR24421 48 423 3.1E-80 T 22-04-2016 RM25_RS00840 66cd4fff3d13e758ea3c8efe54949bc2 439 Gene3D G3DSA:3.30.565.10 318 409 1.5E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS00840 66cd4fff3d13e758ea3c8efe54949bc2 439 Pfam PF07730 Histidine kinase 201 272 7.5E-18 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RM25_RS02765 a12f1eba5555203675715b4eb8118176 94 Pfam PF03795 YCII-related domain 3 86 2.0E-10 T 22-04-2016 IPR005545 YCII-related RM25_RS02765 a12f1eba5555203675715b4eb8118176 94 Gene3D G3DSA:3.30.70.1060 3 88 2.1E-14 T 22-04-2016 RM25_RS02765 a12f1eba5555203675715b4eb8118176 94 SUPERFAMILY SSF54909 1 88 9.83E-17 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RM25_RS10870 4f765fce4c8ddb95cde3496ae1f62153 260 Gene3D G3DSA:3.40.50.300 2 210 6.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10870 4f765fce4c8ddb95cde3496ae1f62153 260 Pfam PF00005 ABC transporter 22 164 1.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS10870 4f765fce4c8ddb95cde3496ae1f62153 260 PANTHER PTHR24220 3 209 7.4E-87 T 22-04-2016 RM25_RS10870 4f765fce4c8ddb95cde3496ae1f62153 260 SMART SM00382 30 213 2.4E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS10870 4f765fce4c8ddb95cde3496ae1f62153 260 SUPERFAMILY SSF52540 2 230 1.57E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10870 4f765fce4c8ddb95cde3496ae1f62153 260 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS09445 45eb28c6cec308edcf9d6f5d3483810e 286 SUPERFAMILY SSF48179 171 277 2.04E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RM25_RS09445 45eb28c6cec308edcf9d6f5d3483810e 286 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 14 276 25.665 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RM25_RS09445 45eb28c6cec308edcf9d6f5d3483810e 286 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 15 109 4.9E-16 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RM25_RS09445 45eb28c6cec308edcf9d6f5d3483810e 286 PIRSF PIRSF000193 13 279 4.1E-72 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RM25_RS09445 45eb28c6cec308edcf9d6f5d3483810e 286 PANTHER PTHR11645 4 286 2.1E-98 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RM25_RS09445 45eb28c6cec308edcf9d6f5d3483810e 286 PANTHER PTHR11645:SF0 4 286 2.1E-98 T 22-04-2016 RM25_RS09445 45eb28c6cec308edcf9d6f5d3483810e 286 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 172 276 3.1E-38 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RM25_RS09445 45eb28c6cec308edcf9d6f5d3483810e 286 Gene3D G3DSA:3.40.50.720 15 169 3.2E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS09445 45eb28c6cec308edcf9d6f5d3483810e 286 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 16 276 1.2E-77 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RM25_RS09445 45eb28c6cec308edcf9d6f5d3483810e 286 Gene3D G3DSA:1.10.3730.10 171 276 4.7E-38 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RM25_RS09445 45eb28c6cec308edcf9d6f5d3483810e 286 SUPERFAMILY SSF51735 15 169 1.2E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08495 fa5dcde8fee905ad9cc05d8b340c68d5 237 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 39 222 9.8E-28 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RM25_RS08495 fa5dcde8fee905ad9cc05d8b340c68d5 237 PANTHER PTHR23407 31 226 1.7E-30 T 22-04-2016 RM25_RS08495 fa5dcde8fee905ad9cc05d8b340c68d5 237 Gene3D G3DSA:3.40.50.10420 38 226 3.0E-42 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RM25_RS08495 fa5dcde8fee905ad9cc05d8b340c68d5 237 SUPERFAMILY SSF100950 38 235 3.91E-38 T 22-04-2016 RM25_RS08495 fa5dcde8fee905ad9cc05d8b340c68d5 237 PANTHER PTHR23407:SF1 31 226 1.7E-30 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RM25_RS08495 fa5dcde8fee905ad9cc05d8b340c68d5 237 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 39 222 7.6E-34 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RM25_RS04915 74989216bdf89fad51724d5afffb7599 230 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 13 206 1.3E-19 T 22-04-2016 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type RM25_RS04915 74989216bdf89fad51724d5afffb7599 230 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 15 75 1.3E-5 T 22-04-2016 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 RM25_RS04915 74989216bdf89fad51724d5afffb7599 230 TIGRFAM TIGR03085 TIGR03085: TIGR03085 family protein 14 222 4.2E-46 T 22-04-2016 IPR017519 Conserved hypothetical protein CHP03085 RM25_RS04915 74989216bdf89fad51724d5afffb7599 230 SUPERFAMILY SSF109854 4 127 8.24E-7 T 22-04-2016 RM25_RS10260 218a59d87eba7da02a2d51c9181dcc4f 459 SUPERFAMILY SSF55874 280 394 1.86E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS10260 218a59d87eba7da02a2d51c9181dcc4f 459 Gene3D G3DSA:3.30.565.10 309 397 1.9E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS10260 218a59d87eba7da02a2d51c9181dcc4f 459 PANTHER PTHR24421 43 410 7.1E-78 T 22-04-2016 RM25_RS10260 218a59d87eba7da02a2d51c9181dcc4f 459 PANTHER PTHR24421:SF26 43 410 7.1E-78 T 22-04-2016 RM25_RS10260 218a59d87eba7da02a2d51c9181dcc4f 459 Pfam PF07730 Histidine kinase 200 263 4.9E-21 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RM25_RS07155 9233ebcba322e91f3f515f70ddc4bf78 222 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 27 211 8.8E-46 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RM25_RS07155 9233ebcba322e91f3f515f70ddc4bf78 222 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 25 220 27.069 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RM25_RS07155 9233ebcba322e91f3f515f70ddc4bf78 222 SUPERFAMILY SSF52540 27 217 7.67E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07155 9233ebcba322e91f3f515f70ddc4bf78 222 Pfam PF01121 Dephospho-CoA kinase 27 203 2.2E-53 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RM25_RS07155 9233ebcba322e91f3f515f70ddc4bf78 222 PANTHER PTHR10695 27 217 6.0E-68 T 22-04-2016 RM25_RS07155 9233ebcba322e91f3f515f70ddc4bf78 222 Gene3D G3DSA:3.40.50.300 21 217 2.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01965 56e574abcecff8474d5660df3417c59d 1054 PANTHER PTHR32114 2 1054 3.5E-83 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 RM25_RS01965 56e574abcecff8474d5660df3417c59d 1054 PANTHER PTHR32114:SF2 2 1054 3.5E-83 T 22-04-2016 RM25_RS01965 56e574abcecff8474d5660df3417c59d 1054 SUPERFAMILY SSF52540 897 1046 1.54E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01965 56e574abcecff8474d5660df3417c59d 1054 SUPERFAMILY SSF52540 1 218 1.54E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01965 56e574abcecff8474d5660df3417c59d 1054 Pfam PF13476 AAA domain 5 217 4.0E-23 T 22-04-2016 RM25_RS01965 56e574abcecff8474d5660df3417c59d 1054 Pfam PF13558 Putative exonuclease SbcCD, C subunit 948 1010 5.0E-12 T 22-04-2016 RM25_RS01965 56e574abcecff8474d5660df3417c59d 1054 Gene3D G3DSA:3.40.50.300 1 181 4.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01965 56e574abcecff8474d5660df3417c59d 1054 Gene3D G3DSA:3.40.50.300 905 1051 4.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01965 56e574abcecff8474d5660df3417c59d 1054 Gene3D G3DSA:3.40.50.300 524 525 4.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07005 4ff34af02154e506df5f7ad2abf8c019 124 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 9.3E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS07005 4ff34af02154e506df5f7ad2abf8c019 124 PANTHER PTHR38445 1 121 4.1E-12 T 22-04-2016 RM25_RS07005 4ff34af02154e506df5f7ad2abf8c019 124 Gene3D G3DSA:1.10.10.10 4 73 9.8E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07005 4ff34af02154e506df5f7ad2abf8c019 124 SUPERFAMILY SSF46785 3 76 4.55E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07005 4ff34af02154e506df5f7ad2abf8c019 124 SMART SM00345 13 72 1.4E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS11825 264e57e159104592e8cfe650b09987e1 192 PANTHER PTHR23091 1 51 4.5E-15 T 22-04-2016 RM25_RS11825 264e57e159104592e8cfe650b09987e1 192 PANTHER PTHR23091 69 158 4.5E-15 T 22-04-2016 RM25_RS11825 264e57e159104592e8cfe650b09987e1 192 SUPERFAMILY SSF55729 4 144 3.38E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS11825 264e57e159104592e8cfe650b09987e1 192 Pfam PF00583 Acetyltransferase (GNAT) family 40 131 2.0E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS11825 264e57e159104592e8cfe650b09987e1 192 Gene3D G3DSA:3.40.630.30 3 145 1.2E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS12020 5b28d2780c3343936d6690b0fad89065 176 Gene3D G3DSA:1.10.10.10 30 151 1.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS12020 5b28d2780c3343936d6690b0fad89065 176 SUPERFAMILY SSF46785 29 151 3.74E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS12020 5b28d2780c3343936d6690b0fad89065 176 SMART SM00347 59 155 1.5E-4 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS12020 5b28d2780c3343936d6690b0fad89065 176 Pfam PF12802 MarR family 66 122 2.6E-8 T 22-04-2016 RM25_RS00520 0f56963e3583ddc3f16fe591d2f83c2a 281 SUPERFAMILY SSF53850 71 271 9.01E-21 T 22-04-2016 RM25_RS00520 0f56963e3583ddc3f16fe591d2f83c2a 281 SUPERFAMILY SSF53850 7 24 9.01E-21 T 22-04-2016 RM25_RS00520 0f56963e3583ddc3f16fe591d2f83c2a 281 Gene3D G3DSA:3.40.190.10 16 25 6.4E-14 T 22-04-2016 RM25_RS00520 0f56963e3583ddc3f16fe591d2f83c2a 281 Gene3D G3DSA:3.40.190.10 74 191 6.4E-14 T 22-04-2016 RM25_RS00520 0f56963e3583ddc3f16fe591d2f83c2a 281 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 80 269 8.7E-16 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RM25_RS12090 78555214ef1b2be6f539aa59335f2d84 323 PANTHER PTHR30151 73 323 8.4E-53 T 22-04-2016 RM25_RS12090 78555214ef1b2be6f539aa59335f2d84 323 SUPERFAMILY SSF161098 122 306 5.23E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS12090 78555214ef1b2be6f539aa59335f2d84 323 Gene3D G3DSA:1.10.3720.10 79 315 6.4E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS12090 78555214ef1b2be6f539aa59335f2d84 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 147 315 8.3E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS01205 bb0c6a4f12bc4b123772c37d0ac0b295 465 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 464 1.6E-80 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RM25_RS01205 bb0c6a4f12bc4b123772c37d0ac0b295 465 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 458 3.5E-73 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RM25_RS01205 bb0c6a4f12bc4b123772c37d0ac0b295 465 PANTHER PTHR10283 1 463 6.0E-60 T 22-04-2016 RM25_RS11020 820bde472efc573fce83bcf57792fcd3 226 PANTHER PTHR30177 23 212 6.0E-48 T 22-04-2016 RM25_RS11020 820bde472efc573fce83bcf57792fcd3 226 Gene3D G3DSA:1.10.3720.10 20 206 1.1E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11020 820bde472efc573fce83bcf57792fcd3 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 215 6.6E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11020 820bde472efc573fce83bcf57792fcd3 226 SUPERFAMILY SSF161098 22 205 5.89E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11020 820bde472efc573fce83bcf57792fcd3 226 PANTHER PTHR30177:SF4 23 212 6.0E-48 T 22-04-2016 RM25_RS05540 64a37a9e5b6dc079318c2cd72355fa69 276 PANTHER PTHR10992 7 274 2.6E-63 T 22-04-2016 RM25_RS05540 64a37a9e5b6dc079318c2cd72355fa69 276 Pfam PF12697 Alpha/beta hydrolase family 21 264 1.2E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RM25_RS05540 64a37a9e5b6dc079318c2cd72355fa69 276 Gene3D G3DSA:3.40.50.1820 7 272 2.0E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS05540 64a37a9e5b6dc079318c2cd72355fa69 276 PANTHER PTHR10992:SF768 7 274 2.6E-63 T 22-04-2016 RM25_RS05540 64a37a9e5b6dc079318c2cd72355fa69 276 SUPERFAMILY SSF53474 6 272 4.25E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS07750 bd2be8c48cda77664e76f86cfc1dc448 306 SUPERFAMILY SSF53850 97 300 1.3E-37 T 22-04-2016 RM25_RS07750 bd2be8c48cda77664e76f86cfc1dc448 306 PANTHER PTHR30126:SF11 14 302 5.5E-63 T 22-04-2016 RM25_RS07750 bd2be8c48cda77664e76f86cfc1dc448 306 Pfam PF03466 LysR substrate binding domain 100 300 2.6E-38 T 22-04-2016 IPR005119 LysR, substrate-binding RM25_RS07750 bd2be8c48cda77664e76f86cfc1dc448 306 SUPERFAMILY SSF46785 13 123 5.44E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07750 bd2be8c48cda77664e76f86cfc1dc448 306 Gene3D G3DSA:3.40.190.10 103 188 4.0E-14 T 22-04-2016 RM25_RS07750 bd2be8c48cda77664e76f86cfc1dc448 306 Gene3D G3DSA:1.10.10.10 19 99 9.4E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07750 bd2be8c48cda77664e76f86cfc1dc448 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 74 1.6E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RM25_RS07750 bd2be8c48cda77664e76f86cfc1dc448 306 PANTHER PTHR30126 14 302 5.5E-63 T 22-04-2016 RM25_RS07750 bd2be8c48cda77664e76f86cfc1dc448 306 Gene3D G3DSA:3.40.190.10 189 273 1.1E-15 T 22-04-2016 RM25_RS05265 9e82b64806e052d1a06d02c872853c00 316 Gene3D G3DSA:3.90.180.10 1 138 7.5E-18 T 22-04-2016 IPR011032 GroES-like RM25_RS05265 9e82b64806e052d1a06d02c872853c00 316 PANTHER PTHR11695:SF607 13 301 4.2E-34 T 22-04-2016 RM25_RS05265 9e82b64806e052d1a06d02c872853c00 316 SUPERFAMILY SSF50129 1 138 1.09E-16 T 22-04-2016 IPR011032 GroES-like RM25_RS05265 9e82b64806e052d1a06d02c872853c00 316 Gene3D G3DSA:3.40.50.720 139 260 1.6E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS05265 9e82b64806e052d1a06d02c872853c00 316 SMART SM00829 10 314 0.0032 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RM25_RS05265 9e82b64806e052d1a06d02c872853c00 316 PANTHER PTHR11695 13 301 4.2E-34 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RM25_RS05265 9e82b64806e052d1a06d02c872853c00 316 SUPERFAMILY SSF51735 106 284 2.11E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00730 8f563642daa7a3473ffbb25eba613751 225 Gene3D G3DSA:3.40.50.2300 1 117 6.9E-31 T 22-04-2016 RM25_RS00730 8f563642daa7a3473ffbb25eba613751 225 SMART SM00448 1 108 3.7E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS00730 8f563642daa7a3473ffbb25eba613751 225 Pfam PF00072 Response regulator receiver domain 1 109 2.2E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS00730 8f563642daa7a3473ffbb25eba613751 225 PANTHER PTHR26402 1 221 2.6E-85 T 22-04-2016 RM25_RS00730 8f563642daa7a3473ffbb25eba613751 225 SUPERFAMILY SSF52172 1 172 1.94E-33 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS00730 8f563642daa7a3473ffbb25eba613751 225 SMART SM00862 145 221 3.2E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS00730 8f563642daa7a3473ffbb25eba613751 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.0E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS00730 8f563642daa7a3473ffbb25eba613751 225 PANTHER PTHR26402:SF50 1 221 2.6E-85 T 22-04-2016 RM25_RS00730 8f563642daa7a3473ffbb25eba613751 225 Gene3D G3DSA:1.10.10.10 123 221 5.2E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS01025 75efac97b296220ca94d918dd3c1af0e 448 SUPERFAMILY SSF51230 3 92 2.62E-25 T 22-04-2016 IPR011053 Single hybrid motif RM25_RS01025 75efac97b296220ca94d918dd3c1af0e 448 PANTHER PTHR23151:SF68 214 446 2.7E-101 T 22-04-2016 RM25_RS01025 75efac97b296220ca94d918dd3c1af0e 448 PANTHER PTHR23151:SF68 1 197 2.7E-101 T 22-04-2016 RM25_RS01025 75efac97b296220ca94d918dd3c1af0e 448 SUPERFAMILY SSF52777 211 445 2.49E-68 T 22-04-2016 RM25_RS01025 75efac97b296220ca94d918dd3c1af0e 448 Pfam PF00364 Biotin-requiring enzyme 5 74 7.3E-20 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RM25_RS01025 75efac97b296220ca94d918dd3c1af0e 448 Gene3D G3DSA:2.40.50.100 3 90 2.0E-24 T 22-04-2016 RM25_RS01025 75efac97b296220ca94d918dd3c1af0e 448 PANTHER PTHR23151 214 446 2.7E-101 T 22-04-2016 RM25_RS01025 75efac97b296220ca94d918dd3c1af0e 448 PANTHER PTHR23151 1 197 2.7E-101 T 22-04-2016 RM25_RS01025 75efac97b296220ca94d918dd3c1af0e 448 Gene3D G3DSA:3.30.559.10 208 445 6.8E-70 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RM25_RS01025 75efac97b296220ca94d918dd3c1af0e 448 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 215 446 1.6E-69 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RM25_RS07940 a69a12117f0f078e9a0c79e2f54aacfe 269 PANTHER PTHR10291:SF1 20 269 2.8E-97 T 22-04-2016 RM25_RS07940 a69a12117f0f078e9a0c79e2f54aacfe 269 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 37 269 35.181 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RM25_RS07940 a69a12117f0f078e9a0c79e2f54aacfe 269 PANTHER PTHR10291 20 269 2.8E-97 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RM25_RS07940 a69a12117f0f078e9a0c79e2f54aacfe 269 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 37 268 8.3E-61 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RM25_RS07940 a69a12117f0f078e9a0c79e2f54aacfe 269 SUPERFAMILY SSF64005 35 264 7.19E-69 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RM25_RS07940 a69a12117f0f078e9a0c79e2f54aacfe 269 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 214 231 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 RM25_RS07940 a69a12117f0f078e9a0c79e2f54aacfe 269 Pfam PF01255 Putative undecaprenyl diphosphate synthase 45 268 6.9E-67 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RM25_RS07940 a69a12117f0f078e9a0c79e2f54aacfe 269 Gene3D G3DSA:3.40.1180.10 23 269 6.0E-82 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RM25_RS09010 62e1704350b6d851f2e4197ca40ff9f1 234 Pfam PF04011 LemA family 3 172 8.7E-65 T 22-04-2016 IPR007156 LemA RM25_RS09010 62e1704350b6d851f2e4197ca40ff9f1 234 Gene3D G3DSA:1.20.1440.20 2 172 3.5E-61 T 22-04-2016 IPR023353 LemA-like domain RM25_RS09010 62e1704350b6d851f2e4197ca40ff9f1 234 PANTHER PTHR34478 1 175 8.5E-70 T 22-04-2016 RM25_RS09010 62e1704350b6d851f2e4197ca40ff9f1 234 SUPERFAMILY SSF140478 9 161 1.96E-51 T 22-04-2016 IPR023353 LemA-like domain RM25_RS09010 62e1704350b6d851f2e4197ca40ff9f1 234 PANTHER PTHR34478:SF2 1 175 8.5E-70 T 22-04-2016 RM25_RS04205 0220752f4ea19132bd6cededa852d95c 90 PANTHER PTHR40449 1 90 5.0E-38 T 22-04-2016 RM25_RS04205 0220752f4ea19132bd6cededa852d95c 90 SMART SM00877 18 85 5.4E-13 T 22-04-2016 IPR000249 Microcompartment protein, bacteria RM25_RS04205 0220752f4ea19132bd6cededa852d95c 90 PANTHER PTHR40449:SF2 1 90 5.0E-38 T 22-04-2016 RM25_RS04205 0220752f4ea19132bd6cededa852d95c 90 Pfam PF00936 BMC domain 19 76 3.1E-12 T 22-04-2016 IPR000249 Microcompartment protein, bacteria RM25_RS04205 0220752f4ea19132bd6cededa852d95c 90 SUPERFAMILY SSF143414 18 78 3.14E-13 T 22-04-2016 RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 Pfam PF01078 Magnesium chelatase, subunit ChlI 193 395 4.2E-90 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 Gene3D G3DSA:3.40.50.300 193 391 4.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 SUPERFAMILY SSF54211 5 168 8.72E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 502 6.4E-145 T 22-04-2016 IPR004482 Mg chelatase-related protein RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 409 503 2.3E-23 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 SUPERFAMILY SSF52540 193 505 2.86E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 PANTHER PTHR32039:SF7 1 508 5.9E-198 T 22-04-2016 IPR004482 Mg chelatase-related protein RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 PANTHER PTHR32039 1 508 5.9E-198 T 22-04-2016 RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 Gene3D G3DSA:3.30.230.10 6 169 5.4E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.7E-33 T 22-04-2016 RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 SMART SM00382 213 396 8.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 212 227 3.66E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 321 334 3.66E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RM25_RS06625 400ce0e6aae2efbe5b57ccf5b561578e 512 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 293 307 3.66E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RM25_RS03570 f8dcb937e3c03f53866987c39c04394e 483 PANTHER PTHR11076 7 360 1.1E-113 T 22-04-2016 RM25_RS03570 f8dcb937e3c03f53866987c39c04394e 483 Hamap MF_01113 DNA polymerase IV [dinB]. 4 355 33.813 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS03570 f8dcb937e3c03f53866987c39c04394e 483 SUPERFAMILY SSF100879 245 343 5.3E-25 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS03570 f8dcb937e3c03f53866987c39c04394e 483 Gene3D G3DSA:3.30.70.270 69 169 2.4E-22 T 22-04-2016 RM25_RS03570 f8dcb937e3c03f53866987c39c04394e 483 Gene3D G3DSA:1.10.150.20 171 240 9.1E-20 T 22-04-2016 RM25_RS03570 f8dcb937e3c03f53866987c39c04394e 483 SUPERFAMILY SSF56672 5 240 6.85E-71 T 22-04-2016 RM25_RS03570 f8dcb937e3c03f53866987c39c04394e 483 Pfam PF00817 impB/mucB/samB family 10 159 4.0E-40 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS03570 f8dcb937e3c03f53866987c39c04394e 483 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 350 8.3E-16 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS03570 f8dcb937e3c03f53866987c39c04394e 483 Gene3D G3DSA:3.30.1490.100 247 352 2.4E-28 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS03535 94d2e83375e32564bc98eaa6b9df6bfb 103 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 28 97 4.5E-20 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 RM25_RS03535 94d2e83375e32564bc98eaa6b9df6bfb 103 Gene3D G3DSA:3.30.1390.10 8 102 6.5E-27 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RM25_RS03535 94d2e83375e32564bc98eaa6b9df6bfb 103 PANTHER PTHR33473 1 98 1.1E-24 T 22-04-2016 RM25_RS03535 94d2e83375e32564bc98eaa6b9df6bfb 103 SUPERFAMILY SSF54736 27 99 8.37E-23 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RM25_RS03535 94d2e83375e32564bc98eaa6b9df6bfb 103 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 5 103 15.127 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RM25_RS11645 976dc2bfa1ac83b8c520bfb328ae8c4b 286 Pfam PF01610 Transposase 4 260 1.6E-55 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS11645 976dc2bfa1ac83b8c520bfb328ae8c4b 286 PANTHER PTHR33498 44 274 1.0E-12 T 22-04-2016 RM25_RS11645 976dc2bfa1ac83b8c520bfb328ae8c4b 286 PANTHER PTHR33498:SF1 44 274 1.0E-12 T 22-04-2016 RM25_RS02870 73b90db6cc4eb7cc2ed21b326a583b68 147 PANTHER PTHR11545 2 144 5.1E-64 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RM25_RS02870 73b90db6cc4eb7cc2ed21b326a583b68 147 SUPERFAMILY SSF52161 4 144 8.63E-53 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RM25_RS02870 73b90db6cc4eb7cc2ed21b326a583b68 147 Pfam PF00572 Ribosomal protein L13 15 138 2.7E-49 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RM25_RS02870 73b90db6cc4eb7cc2ed21b326a583b68 147 PIRSF PIRSF002181 2 147 1.0E-42 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RM25_RS02870 73b90db6cc4eb7cc2ed21b326a583b68 147 Gene3D G3DSA:3.90.1180.10 3 141 5.3E-56 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RM25_RS02870 73b90db6cc4eb7cc2ed21b326a583b68 147 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 143 25.333 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RM25_RS02870 73b90db6cc4eb7cc2ed21b326a583b68 147 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 141 1.7E-53 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 RM25_RS03660 6c069db07378607e6eb748529bc81ff9 257 PANTHER PTHR21343:SF9 5 250 4.0E-60 T 22-04-2016 RM25_RS03660 6c069db07378607e6eb748529bc81ff9 257 Gene3D G3DSA:3.40.50.880 54 208 3.1E-13 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS03660 6c069db07378607e6eb748529bc81ff9 257 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 6 201 1.0E-29 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 RM25_RS03660 6c069db07378607e6eb748529bc81ff9 257 PANTHER PTHR21343 5 250 4.0E-60 T 22-04-2016 RM25_RS03660 6c069db07378607e6eb748529bc81ff9 257 SUPERFAMILY SSF52317 22 212 5.35E-19 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS09130 147ba46d8837fabd90d38e26b49a5fc1 63 Pfam PF13783 Domain of unknown function (DUF4177) 27 48 7.7E-6 T 22-04-2016 IPR025234 Protein of unknown function DUF4177 RM25_RS09025 30999db54274e2ebeb1dff7d4ed23c27 267 Gene3D G3DSA:3.40.50.150 19 251 5.3E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09025 30999db54274e2ebeb1dff7d4ed23c27 267 PANTHER PTHR12176:SF22 6 242 1.1E-35 T 22-04-2016 RM25_RS09025 30999db54274e2ebeb1dff7d4ed23c27 267 SUPERFAMILY SSF53335 31 211 2.75E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09025 30999db54274e2ebeb1dff7d4ed23c27 267 PANTHER PTHR12176 6 242 1.1E-35 T 22-04-2016 RM25_RS00535 acf88925a907f3e773cc07f1d5155f19 326 Gene3D G3DSA:1.10.3720.10 74 140 2.6E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS00535 acf88925a907f3e773cc07f1d5155f19 326 Gene3D G3DSA:1.10.3720.10 172 301 2.6E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS00535 acf88925a907f3e773cc07f1d5155f19 326 PANTHER PTHR30450 179 310 3.6E-67 T 22-04-2016 RM25_RS00535 acf88925a907f3e773cc07f1d5155f19 326 PANTHER PTHR30450 51 150 3.6E-67 T 22-04-2016 RM25_RS00535 acf88925a907f3e773cc07f1d5155f19 326 SUPERFAMILY SSF161098 169 287 2.75E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS00535 acf88925a907f3e773cc07f1d5155f19 326 SUPERFAMILY SSF161098 73 137 2.75E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS00535 acf88925a907f3e773cc07f1d5155f19 326 PANTHER PTHR30450:SF2 179 310 3.6E-67 T 22-04-2016 RM25_RS00535 acf88925a907f3e773cc07f1d5155f19 326 PANTHER PTHR30450:SF2 51 150 3.6E-67 T 22-04-2016 RM25_RS00535 acf88925a907f3e773cc07f1d5155f19 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 301 3.0E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS08200 ff1ae85482a327f640f8ae8da92e2475 517 Pfam PF00860 Permease family 27 425 9.6E-74 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RM25_RS08200 ff1ae85482a327f640f8ae8da92e2475 517 PANTHER PTHR11119 15 239 8.6E-132 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RM25_RS08200 ff1ae85482a327f640f8ae8da92e2475 517 PANTHER PTHR11119 263 447 8.6E-132 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RM25_RS08200 ff1ae85482a327f640f8ae8da92e2475 517 PANTHER PTHR11119:SF49 15 239 8.6E-132 T 22-04-2016 RM25_RS08200 ff1ae85482a327f640f8ae8da92e2475 517 PANTHER PTHR11119:SF49 263 447 8.6E-132 T 22-04-2016 RM25_RS04310 d4590902081754fd0845ae13a1ef67c5 151 SUPERFAMILY SSF142433 1 147 7.59E-41 T 22-04-2016 IPR008136 CinA, C-terminal RM25_RS04310 d4590902081754fd0845ae13a1ef67c5 151 PANTHER PTHR13939 1 147 3.9E-37 T 22-04-2016 RM25_RS04310 d4590902081754fd0845ae13a1ef67c5 151 PANTHER PTHR13939:SF0 1 147 3.9E-37 T 22-04-2016 RM25_RS04310 d4590902081754fd0845ae13a1ef67c5 151 Pfam PF02464 Competence-damaged protein 2 146 3.4E-43 T 22-04-2016 IPR008136 CinA, C-terminal RM25_RS04310 d4590902081754fd0845ae13a1ef67c5 151 Gene3D G3DSA:3.90.950.20 1 147 2.9E-47 T 22-04-2016 IPR008136 CinA, C-terminal RM25_RS04310 d4590902081754fd0845ae13a1ef67c5 151 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 2 146 3.2E-34 T 22-04-2016 IPR008136 CinA, C-terminal RM25_RS09280 a5a37680ae8d651da09c1c4c1667fdd2 208 TIGRFAM TIGR03941 tRNA_deam_assoc: putative tRNA adenosine deaminase-associated protein 56 202 7.4E-34 T 22-04-2016 IPR023869 tRNA adenosine deaminase-associated protein, putative RM25_RS10010 41e31a5afbd5e234ff4fa469b31e6aa3 174 Pfam PF01047 MarR family 20 74 2.3E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS10010 41e31a5afbd5e234ff4fa469b31e6aa3 174 PANTHER PTHR33164 1 130 5.2E-14 T 22-04-2016 RM25_RS10010 41e31a5afbd5e234ff4fa469b31e6aa3 174 SUPERFAMILY SSF46785 8 122 8.56E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10010 41e31a5afbd5e234ff4fa469b31e6aa3 174 SMART SM00347 10 106 9.2E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS10010 41e31a5afbd5e234ff4fa469b31e6aa3 174 Gene3D G3DSA:1.10.10.10 3 120 2.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10010 41e31a5afbd5e234ff4fa469b31e6aa3 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 9.1E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS10010 41e31a5afbd5e234ff4fa469b31e6aa3 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 66 9.1E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS10010 41e31a5afbd5e234ff4fa469b31e6aa3 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 34 50 9.1E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS04365 c6b32a8b805fb4f028737601e15c5975 473 PANTHER PTHR10229:SF0 1 459 3.3E-163 T 22-04-2016 RM25_RS04365 c6b32a8b805fb4f028737601e15c5975 473 Pfam PF01926 50S ribosome-binding GTPase 256 374 3.1E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS04365 c6b32a8b805fb4f028737601e15c5975 473 PANTHER PTHR10229 1 459 3.3E-163 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RM25_RS04365 c6b32a8b805fb4f028737601e15c5975 473 Gene3D G3DSA:3.40.50.300 252 416 1.1E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04365 c6b32a8b805fb4f028737601e15c5975 473 SUPERFAMILY SSF52540 253 418 2.11E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04365 c6b32a8b805fb4f028737601e15c5975 473 Pfam PF13167 GTP-binding GTPase N-terminal 74 161 9.2E-33 T 22-04-2016 IPR025121 GTPase HflX, N-terminal RM25_RS04365 c6b32a8b805fb4f028737601e15c5975 473 PIRSF PIRSF006809 48 473 2.9E-157 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RM25_RS04365 c6b32a8b805fb4f028737601e15c5975 473 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 256 276 6.1E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS04365 c6b32a8b805fb4f028737601e15c5975 473 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 323 341 6.1E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS04365 c6b32a8b805fb4f028737601e15c5975 473 Pfam PF16360 GTP-binding GTPase Middle Region 163 248 6.3E-28 T 22-04-2016 IPR032305 GTP-binding protein, middle domain RM25_RS04365 c6b32a8b805fb4f028737601e15c5975 473 Hamap MF_00900 GTPase HflX [hflX]. 76 444 46.937 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RM25_RS04365 c6b32a8b805fb4f028737601e15c5975 473 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 57 414 2.2E-135 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RM25_RS05175 2cad474532064ae6544d55f3ccb29172 673 PANTHER PTHR30580 8 673 1.3E-111 T 22-04-2016 RM25_RS05175 2cad474532064ae6544d55f3ccb29172 673 SUPERFAMILY SSF52540 194 266 1.49E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05175 2cad474532064ae6544d55f3ccb29172 673 Hamap MF_00983 Probable primosomal protein N' [priA]. 23 672 19.339 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RM25_RS05175 2cad474532064ae6544d55f3ccb29172 673 Gene3D G3DSA:3.40.50.300 188 283 3.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10335 624fcdb2fe78731cb7619dce6699823c 229 Pfam PF03458 UPF0126 domain 103 177 1.4E-18 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 RM25_RS10335 624fcdb2fe78731cb7619dce6699823c 229 Pfam PF03458 UPF0126 domain 17 90 6.7E-18 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 RM25_RS10335 624fcdb2fe78731cb7619dce6699823c 229 PANTHER PTHR30506 9 221 6.4E-41 T 22-04-2016 RM25_RS05630 597437311fcf4c6a848b3e3c7fb3f90c 74 PANTHER PTHR33280:SF2 1 74 5.5E-36 T 22-04-2016 RM25_RS05630 597437311fcf4c6a848b3e3c7fb3f90c 74 SUPERFAMILY SSF143800 1 67 1.45E-26 T 22-04-2016 RM25_RS05630 597437311fcf4c6a848b3e3c7fb3f90c 74 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS05630 597437311fcf4c6a848b3e3c7fb3f90c 74 PRINTS PR01249 Ribosomal protein L31 signature 32 47 5.5E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS05630 597437311fcf4c6a848b3e3c7fb3f90c 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.5E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS05630 597437311fcf4c6a848b3e3c7fb3f90c 74 PRINTS PR01249 Ribosomal protein L31 signature 47 65 5.5E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS05630 597437311fcf4c6a848b3e3c7fb3f90c 74 Pfam PF01197 Ribosomal protein L31 1 66 1.9E-31 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS05630 597437311fcf4c6a848b3e3c7fb3f90c 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 4.3E-34 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS05630 597437311fcf4c6a848b3e3c7fb3f90c 74 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 29.036 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS05630 597437311fcf4c6a848b3e3c7fb3f90c 74 PANTHER PTHR33280 1 74 5.5E-36 T 22-04-2016 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 401 39.429 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 Gene3D G3DSA:3.40.50.1270 183 389 1.8E-76 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 PIRSF PIRSF000724 1 403 1.6E-128 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 PRINTS PR00477 Phosphoglycerate kinase family signature 193 212 4.2E-81 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 PRINTS PR00477 Phosphoglycerate kinase family signature 320 345 4.2E-81 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 PRINTS PR00477 Phosphoglycerate kinase family signature 30 52 4.2E-81 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 PRINTS PR00477 Phosphoglycerate kinase family signature 377 394 4.2E-81 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 PRINTS PR00477 Phosphoglycerate kinase family signature 9 25 4.2E-81 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 PRINTS PR00477 Phosphoglycerate kinase family signature 353 364 4.2E-81 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 PRINTS PR00477 Phosphoglycerate kinase family signature 108 123 4.2E-81 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 4.2E-81 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 PRINTS PR00477 Phosphoglycerate kinase family signature 170 192 4.2E-81 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 Pfam PF00162 Phosphoglycerate kinase 6 391 2.1E-142 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 SUPERFAMILY SSF53748 2 401 9.19E-138 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 PANTHER PTHR11406 1 403 2.5E-178 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 Gene3D G3DSA:3.40.50.1260 2 182 4.8E-64 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS07065 48cee1557bdb840e57914043ef544778 403 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 14 24 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RM25_RS02675 a230fd9b885f07ed30698292218b5030 61 SUPERFAMILY SSF57716 3 61 2.78E-22 T 22-04-2016 RM25_RS02675 a230fd9b885f07ed30698292218b5030 61 Gene3D G3DSA:4.10.830.10 1 61 4.6E-29 T 22-04-2016 RM25_RS02675 a230fd9b885f07ed30698292218b5030 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 2.5E-24 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02675 a230fd9b885f07ed30698292218b5030 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 RM25_RS02675 a230fd9b885f07ed30698292218b5030 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.471 T 22-04-2016 IPR023053 Ribosomal protein S14, type Z RM25_RS02675 a230fd9b885f07ed30698292218b5030 61 PANTHER PTHR19836 5 61 5.8E-36 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS09655 5da3d786ced7c2f10d734bd50e7aad91 212 PANTHER PTHR10344:SF0 1 204 3.9E-68 T 22-04-2016 RM25_RS09655 5da3d786ced7c2f10d734bd50e7aad91 212 Hamap MF_00165 Thymidylate kinase [tmk]. 9 211 28.872 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RM25_RS09655 5da3d786ced7c2f10d734bd50e7aad91 212 Pfam PF02223 Thymidylate kinase 13 189 2.0E-44 T 22-04-2016 RM25_RS09655 5da3d786ced7c2f10d734bd50e7aad91 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 8 187 2.7E-46 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RM25_RS09655 5da3d786ced7c2f10d734bd50e7aad91 212 Gene3D G3DSA:3.40.50.300 8 204 1.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09655 5da3d786ced7c2f10d734bd50e7aad91 212 PANTHER PTHR10344 1 204 3.9E-68 T 22-04-2016 RM25_RS09655 5da3d786ced7c2f10d734bd50e7aad91 212 SUPERFAMILY SSF52540 8 190 2.74E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 PANTHER PTHR11911 305 483 4.6E-216 T 22-04-2016 RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 SMART SM00116 156 204 5.7 T 22-04-2016 IPR000644 CBS domain RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 SMART SM00116 97 148 3.2 T 22-04-2016 IPR000644 CBS domain RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 PIRSF PIRSF000130 2 487 1.3E-142 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 TIGRFAM TIGR01303 IMP_DH_rel_1: IMP dehydrogenase family protein 2 483 8.1E-222 T 22-04-2016 IPR005991 IMP dehydrogenase-related 1 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 481 1.2E-95 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 SMART SM01240 10 482 1.7E-169 T 22-04-2016 RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 SUPERFAMILY SSF54631 96 201 3.42E-16 T 22-04-2016 RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 Gene3D G3DSA:3.20.20.70 10 483 3.0E-123 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 SUPERFAMILY SSF51412 214 482 1.83E-82 T 22-04-2016 RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 SUPERFAMILY SSF51412 11 92 1.83E-82 T 22-04-2016 RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 Pfam PF00571 CBS domain 98 135 1.7E-6 T 22-04-2016 IPR000644 CBS domain RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 PANTHER PTHR11911:SF80 10 287 4.6E-216 T 22-04-2016 RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 PANTHER PTHR11911:SF80 305 483 4.6E-216 T 22-04-2016 RM25_RS07415 3ab9bd4772e25eccc919424b80e31c6d 487 PANTHER PTHR11911 10 287 4.6E-216 T 22-04-2016 RM25_RS01015 fc61d4ead3cfb9b18faaa2c0db0378f3 370 Pfam PF00676 Dehydrogenase E1 component 40 312 4.0E-66 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 RM25_RS01015 fc61d4ead3cfb9b18faaa2c0db0378f3 370 Gene3D G3DSA:3.40.50.970 4 354 1.6E-108 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS01015 fc61d4ead3cfb9b18faaa2c0db0378f3 370 SUPERFAMILY SSF52518 9 356 7.74E-84 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS01015 fc61d4ead3cfb9b18faaa2c0db0378f3 370 PANTHER PTHR11516 11 304 7.3E-89 T 22-04-2016 RM25_RS10865 a86ca5af616f7a5f031c6c296fd72158 273 PANTHER PTHR30151 17 272 4.2E-55 T 22-04-2016 RM25_RS10865 a86ca5af616f7a5f031c6c296fd72158 273 Gene3D G3DSA:1.10.3720.10 66 259 1.7E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10865 a86ca5af616f7a5f031c6c296fd72158 273 SUPERFAMILY SSF161098 71 248 1.83E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10865 a86ca5af616f7a5f031c6c296fd72158 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 263 2.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS04080 17a59d3d51eaf01df26926ea67994a2a 385 SUPERFAMILY SSF102114 5 384 2.62E-110 T 22-04-2016 RM25_RS04080 17a59d3d51eaf01df26926ea67994a2a 385 Pfam PF04055 Radical SAM superfamily 19 192 7.7E-23 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RM25_RS04080 17a59d3d51eaf01df26926ea67994a2a 385 Gene3D G3DSA:3.80.30.20 15 234 4.4E-34 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RM25_RS04080 17a59d3d51eaf01df26926ea67994a2a 385 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 16 343 8.9E-76 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- RM25_RS04080 17a59d3d51eaf01df26926ea67994a2a 385 SMART SM00729 14 238 1.3E-55 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RM25_RS04080 17a59d3d51eaf01df26926ea67994a2a 385 PANTHER PTHR13932 13 384 2.4E-132 T 22-04-2016 RM25_RS04080 17a59d3d51eaf01df26926ea67994a2a 385 PANTHER PTHR13932:SF5 13 384 2.4E-132 T 22-04-2016 RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 Gene3D G3DSA:3.30.300.20 202 310 1.7E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 66 81 6.5E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 17 37 6.5E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 SUPERFAMILY SSF54814 195 314 6.41E-32 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 TIGRFAM TIGR00436 era: GTP-binding protein Era 15 297 3.1E-64 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 Hamap MF_00367 GTPase Era [era]. 12 314 32.795 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 141 2.5E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 Pfam PF07650 KH domain 221 303 2.6E-15 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 SUPERFAMILY SSF52540 17 232 3.17E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 Pfam PF01926 50S ribosome-binding GTPase 17 128 2.5E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 PANTHER PTHR11649:SF3 13 314 1.4E-90 T 22-04-2016 RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 PANTHER PTHR11649 13 314 1.4E-90 T 22-04-2016 RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 SMART SM00382 13 162 0.0064 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS04155 5619d32fa61e6d5caab544c54c972262 314 Gene3D G3DSA:3.40.50.300 4 186 1.7E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02845 e243db643430a2b1cb653fde85e32aa0 209 Gene3D G3DSA:3.40.50.150 24 199 4.6E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS02845 e243db643430a2b1cb653fde85e32aa0 209 Pfam PF05175 Methyltransferase small domain 36 203 5.1E-31 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RM25_RS02845 e243db643430a2b1cb653fde85e32aa0 209 PANTHER PTHR18895 33 184 8.3E-32 T 22-04-2016 RM25_RS02845 e243db643430a2b1cb653fde85e32aa0 209 PANTHER PTHR18895:SF68 33 184 8.3E-32 T 22-04-2016 RM25_RS02845 e243db643430a2b1cb653fde85e32aa0 209 SUPERFAMILY SSF53335 27 202 4.37E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07435 6db45b2341fc57cdfd426567557b146a 264 Pfam PF04012 PspA/IM30 family 3 231 9.3E-31 T 22-04-2016 IPR007157 PspA/IM30 RM25_RS07435 6db45b2341fc57cdfd426567557b146a 264 PANTHER PTHR31088 3 233 5.9E-64 T 22-04-2016 RM25_RS07435 6db45b2341fc57cdfd426567557b146a 264 PANTHER PTHR31088:SF0 3 233 5.9E-64 T 22-04-2016 RM25_RS02610 4bebefd16d25613b8b70420af78a506b 219 ProSitePatterns PS00474 Ribosomal protein L3 signature. 107 130 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site RM25_RS02610 4bebefd16d25613b8b70420af78a506b 219 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 7 213 37.597 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02610 4bebefd16d25613b8b70420af78a506b 219 Pfam PF00297 Ribosomal protein L3 104 188 6.7E-19 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02610 4bebefd16d25613b8b70420af78a506b 219 SUPERFAMILY SSF50447 4 216 2.38E-78 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RM25_RS02610 4bebefd16d25613b8b70420af78a506b 219 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 9 210 2.4E-84 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02610 4bebefd16d25613b8b70420af78a506b 219 Gene3D G3DSA:4.10.960.10 83 163 3.0E-32 T 22-04-2016 RM25_RS02610 4bebefd16d25613b8b70420af78a506b 219 Gene3D G3DSA:2.40.30.10 9 38 1.0E-10 T 22-04-2016 RM25_RS02610 4bebefd16d25613b8b70420af78a506b 219 Gene3D G3DSA:2.40.30.10 164 215 1.0E-10 T 22-04-2016 RM25_RS02610 4bebefd16d25613b8b70420af78a506b 219 PANTHER PTHR11229 9 218 1.6E-101 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS10375 7839e6b74d6444b3539dfbd352bfb298 149 PANTHER PTHR23091 2 129 1.5E-12 T 22-04-2016 RM25_RS10375 7839e6b74d6444b3539dfbd352bfb298 149 SUPERFAMILY SSF55729 3 148 2.36E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS10375 7839e6b74d6444b3539dfbd352bfb298 149 Gene3D G3DSA:3.40.630.30 3 148 6.2E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS10375 7839e6b74d6444b3539dfbd352bfb298 149 Pfam PF13673 Acetyltransferase (GNAT) domain 21 131 2.9E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS11125 41f0aadc8d999a0328997b26c7dc9b2d 362 Pfam PF00395 S-layer homology domain 304 344 2.5E-7 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS11125 41f0aadc8d999a0328997b26c7dc9b2d 362 Pfam PF00395 S-layer homology domain 181 223 6.1E-8 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS11125 41f0aadc8d999a0328997b26c7dc9b2d 362 Pfam PF00395 S-layer homology domain 242 283 5.8E-13 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 Gene3D G3DSA:3.30.390.10 4 125 1.0E-53 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 SUPERFAMILY SSF51604 141 422 3.54E-131 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 Pfam PF03952 Enolase, N-terminal domain 4 134 4.1E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 SMART SM01192 139 423 7.9E-219 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 419 2.0E-131 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 423 4.0E-205 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 PRINTS PR00148 Enolase signature 161 174 3.0E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 PRINTS PR00148 Enolase signature 361 378 3.0E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 PRINTS PR00148 Enolase signature 107 123 3.0E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 PRINTS PR00148 Enolase signature 37 51 3.0E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 PRINTS PR00148 Enolase signature 332 346 3.0E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 PRINTS PR00148 Enolase signature 309 320 3.0E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 PANTHER PTHR11902 2 418 1.5E-264 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 Gene3D G3DSA:3.20.20.120 130 422 4.4E-137 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 PIRSF PIRSF001400 1 422 1.1E-194 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 ProSitePatterns PS00164 Enolase signature. 332 345 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 SMART SM01193 4 134 2.0E-88 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 Hamap MF_00318 Enolase [eno]. 2 409 45.492 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS08105 6e20ec7700483fec288f8f55fc1a0ae4 429 SUPERFAMILY SSF54826 4 136 4.42E-52 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RM25_RS11675 b98ca0a5e12afd27794586365a51189c 226 Pfam PF05719 Golgi phosphoprotein 3 (GPP34) 7 208 2.5E-39 T 22-04-2016 IPR008628 Golgi phosphoprotein 3 GO:0048193|GO:0070273 RM25_RS11675 b98ca0a5e12afd27794586365a51189c 226 Gene3D G3DSA:1.10.3630.10 5 204 1.2E-21 T 22-04-2016 RM25_RS11885 324d32f331f7a25aecc1790478187e6a 294 Gene3D G3DSA:3.40.50.1950 23 127 6.6E-7 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RM25_RS11885 324d32f331f7a25aecc1790478187e6a 294 SUPERFAMILY SSF52507 25 128 1.07E-7 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RM25_RS02165 4e3a4e1c880cd4e722f1b9d9e86e4d96 353 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 339 1.4E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RM25_RS02165 4e3a4e1c880cd4e722f1b9d9e86e4d96 353 Gene3D G3DSA:3.90.650.10 171 344 8.5E-59 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RM25_RS02165 4e3a4e1c880cd4e722f1b9d9e86e4d96 353 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 4 346 39.35 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS02165 4e3a4e1c880cd4e722f1b9d9e86e4d96 353 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 5 335 1.2E-120 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RM25_RS02165 4e3a4e1c880cd4e722f1b9d9e86e4d96 353 SUPERFAMILY SSF56042 171 339 1.5E-49 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RM25_RS02165 4e3a4e1c880cd4e722f1b9d9e86e4d96 353 PANTHER PTHR10520 6 325 2.6E-156 T 22-04-2016 RM25_RS02165 4e3a4e1c880cd4e722f1b9d9e86e4d96 353 SUPERFAMILY SSF55326 5 168 2.24E-44 T 22-04-2016 RM25_RS02165 4e3a4e1c880cd4e722f1b9d9e86e4d96 353 Pfam PF00586 AIR synthase related protein, N-terminal domain 53 163 1.4E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RM25_RS02165 4e3a4e1c880cd4e722f1b9d9e86e4d96 353 Gene3D G3DSA:3.30.1330.10 19 168 2.6E-52 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RM25_RS11680 40892788251bfb5d77e8fbb290228c44 451 Pfam PF04892 VanZ like family 49 186 1.1E-22 T 22-04-2016 IPR006976 VanZ-like RM25_RS11680 40892788251bfb5d77e8fbb290228c44 451 PANTHER PTHR36834:SF1 1 232 3.1E-23 T 22-04-2016 RM25_RS11680 40892788251bfb5d77e8fbb290228c44 451 PANTHER PTHR36834 1 232 3.1E-23 T 22-04-2016 RM25_RS06265 efba57ca383ff3257e83181b58017b96 229 Pfam PF02288 Dehydratase medium subunit 73 185 2.9E-38 T 22-04-2016 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor RM25_RS06265 efba57ca383ff3257e83181b58017b96 229 SUPERFAMILY SSF52968 52 226 1.29E-66 T 22-04-2016 IPR010254 B12-dependent dehydratases, beta subunit RM25_RS06265 efba57ca383ff3257e83181b58017b96 229 Gene3D G3DSA:3.40.50.10150 52 227 1.2E-81 T 22-04-2016 IPR010254 B12-dependent dehydratases, beta subunit RM25_RS06265 efba57ca383ff3257e83181b58017b96 229 PIRSF PIRSF018506 1 228 6.7E-90 T 22-04-2016 IPR025541 Propanediol/glycerol dehydratase, medium subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013|UniPathway: UPA00621 RM25_RS11025 5859915c26876262d2b0e223f1420833 336 PANTHER PTHR11695 17 332 1.5E-94 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RM25_RS11025 5859915c26876262d2b0e223f1420833 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 139 1.0E-30 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RM25_RS11025 5859915c26876262d2b0e223f1420833 336 Gene3D G3DSA:3.90.180.10 15 175 4.0E-58 T 22-04-2016 IPR011032 GroES-like RM25_RS11025 5859915c26876262d2b0e223f1420833 336 Pfam PF00107 Zinc-binding dehydrogenase 181 263 1.7E-14 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RM25_RS11025 5859915c26876262d2b0e223f1420833 336 Gene3D G3DSA:3.40.50.720 176 263 6.5E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS11025 5859915c26876262d2b0e223f1420833 336 SMART SM00829 13 332 3.0E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RM25_RS11025 5859915c26876262d2b0e223f1420833 336 SUPERFAMILY SSF50129 15 165 5.02E-47 T 22-04-2016 IPR011032 GroES-like RM25_RS11025 5859915c26876262d2b0e223f1420833 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RM25_RS11025 5859915c26876262d2b0e223f1420833 336 SUPERFAMILY SSF51735 144 302 2.28E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10020 e5028a9bdcaaff3bdcbc05aa73900028 258 PANTHER PTHR30294 3 258 1.7E-74 T 22-04-2016 RM25_RS10020 e5028a9bdcaaff3bdcbc05aa73900028 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 181 200 1.4E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RM25_RS10020 e5028a9bdcaaff3bdcbc05aa73900028 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 201 220 1.4E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RM25_RS10020 e5028a9bdcaaff3bdcbc05aa73900028 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 32 53 1.4E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RM25_RS10020 e5028a9bdcaaff3bdcbc05aa73900028 258 PIRSF PIRSF006648 2 258 1.4E-77 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RM25_RS10020 e5028a9bdcaaff3bdcbc05aa73900028 258 Pfam PF01061 ABC-2 type transporter 15 222 3.9E-32 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RM25_RS10020 e5028a9bdcaaff3bdcbc05aa73900028 258 PANTHER PTHR30294:SF24 3 258 1.7E-74 T 22-04-2016 RM25_RS05710 ab0df3d21098a52a0c840211b5904250 356 SUPERFAMILY SSF52540 123 339 3.75E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05710 ab0df3d21098a52a0c840211b5904250 356 PANTHER PTHR32120 1 339 4.8E-74 T 22-04-2016 RM25_RS05710 ab0df3d21098a52a0c840211b5904250 356 Pfam PF03193 Protein of unknown function, DUF258 105 280 2.5E-42 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 RM25_RS05710 ab0df3d21098a52a0c840211b5904250 356 Gene3D G3DSA:3.40.50.300 123 280 2.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05710 ab0df3d21098a52a0c840211b5904250 356 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 80 339 8.8E-47 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RM25_RS05710 ab0df3d21098a52a0c840211b5904250 356 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 42 345 28.254 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RM25_RS05710 ab0df3d21098a52a0c840211b5904250 356 Gene3D G3DSA:1.10.40.50 282 349 1.6E-13 T 22-04-2016 RM25_RS11240 82a59deade3230c244bfd96f8142cb70 336 SUPERFAMILY SSF46689 2 117 1.43E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS11240 82a59deade3230c244bfd96f8142cb70 336 Gene3D G3DSA:3.30.420.10 138 321 2.4E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS11240 82a59deade3230c244bfd96f8142cb70 336 Pfam PF00665 Integrase core domain 142 283 6.6E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS11240 82a59deade3230c244bfd96f8142cb70 336 Gene3D G3DSA:1.10.10.60 13 85 1.4E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS11240 82a59deade3230c244bfd96f8142cb70 336 SUPERFAMILY SSF53098 184 325 5.82E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS11240 82a59deade3230c244bfd96f8142cb70 336 SUPERFAMILY SSF53098 141 153 5.82E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS11240 82a59deade3230c244bfd96f8142cb70 336 Pfam PF13011 leucine-zipper of insertion element IS481 1 80 9.1E-17 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS04790 73e9096d71e42ae378f9b8b46840eb18 69 SUPERFAMILY SSF53756 1 63 3.01E-8 T 22-04-2016 RM25_RS04790 73e9096d71e42ae378f9b8b46840eb18 69 Gene3D G3DSA:3.40.50.2000 1 51 2.1E-7 T 22-04-2016 RM25_RS10665 4755561132fb3fe5579d227c6187cd90 141 Gene3D G3DSA:1.10.443.10 1 112 9.6E-27 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS10665 4755561132fb3fe5579d227c6187cd90 141 SUPERFAMILY SSF56349 1 112 1.88E-26 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RM25_RS10665 4755561132fb3fe5579d227c6187cd90 141 PANTHER PTHR30349 1 135 4.8E-23 T 22-04-2016 RM25_RS10665 4755561132fb3fe5579d227c6187cd90 141 PANTHER PTHR30349:SF5 1 135 4.8E-23 T 22-04-2016 RM25_RS10665 4755561132fb3fe5579d227c6187cd90 141 Pfam PF00589 Phage integrase family 2 106 2.4E-18 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 178 189 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 SUPERFAMILY SSF52009 119 230 5.62E-32 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 483 495 1.3E-17 T 22-04-2016 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 283 302 1.3E-17 T 22-04-2016 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 430 445 1.3E-17 T 22-04-2016 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 1.3E-17 T 22-04-2016 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 517 6.2E-68 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 SUPERFAMILY SSF51621 249 532 1.23E-74 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 PIRSF PIRSF000732 1 554 9.8E-143 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 430 448 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 PANTHER PTHR22931 65 533 4.9E-119 T 22-04-2016 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 Gene3D G3DSA:3.50.30.10 128 245 2.0E-35 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 Gene3D G3DSA:1.10.274.10 33 127 1.1E-17 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 Pfam PF00391 PEP-utilising enzyme, mobile domain 148 219 6.6E-23 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 PANTHER PTHR22931:SF28 65 533 4.9E-119 T 22-04-2016 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 Gene3D G3DSA:3.20.20.60 250 546 1.0E-80 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 3 538 1.5E-110 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 SUPERFAMILY SSF47831 34 137 1.96E-16 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RM25_RS09155 645d2a2d32ecfbc6791d6c674251749d 554 Pfam PF05524 PEP-utilising enzyme, N-terminal 3 120 4.7E-16 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RM25_RS01520 945c817241cbfe1bd82d794b2497a2c6 471 PANTHER PTHR11785 19 454 9.4E-174 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS01520 945c817241cbfe1bd82d794b2497a2c6 471 PANTHER PTHR11785:SF29 19 454 9.4E-174 T 22-04-2016 RM25_RS01520 945c817241cbfe1bd82d794b2497a2c6 471 ProSitePatterns PS00218 Amino acid permeases signature. 53 83 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RM25_RS01520 945c817241cbfe1bd82d794b2497a2c6 471 Pfam PF00324 Amino acid permease 28 462 1.8E-120 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RM25_RS01520 945c817241cbfe1bd82d794b2497a2c6 471 PIRSF PIRSF006060 2 471 3.4E-78 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS02895 01606c134a81f4ce4a2d8ec945d9dca5 119 SUPERFAMILY SSF56214 1 118 1.44E-25 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RM25_RS02895 01606c134a81f4ce4a2d8ec945d9dca5 119 Gene3D G3DSA:3.90.470.20 1 119 3.6E-38 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RM25_RS02895 01606c134a81f4ce4a2d8ec945d9dca5 119 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 118 6.4E-25 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RM25_RS02895 01606c134a81f4ce4a2d8ec945d9dca5 119 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 118 1.8E-19 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RM25_RS02895 01606c134a81f4ce4a2d8ec945d9dca5 119 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 119 18.313 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RM25_RS02895 01606c134a81f4ce4a2d8ec945d9dca5 119 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 110 1.4E-14 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RM25_RS02895 01606c134a81f4ce4a2d8ec945d9dca5 119 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 118 1.0E-17 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RM25_RS04315 92717c473692815158d2792f3c3aefab 97 Gene3D G3DSA:1.10.260.40 6 71 3.3E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS04315 92717c473692815158d2792f3c3aefab 97 SUPERFAMILY SSF47413 3 69 1.96E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RM25_RS04315 92717c473692815158d2792f3c3aefab 97 Pfam PF13560 Helix-turn-helix domain 6 64 2.4E-9 T 22-04-2016 RM25_RS04315 92717c473692815158d2792f3c3aefab 97 SMART SM00530 9 64 1.7E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RM25_RS06180 348332d272f5caacf8d35e031c5d4047 306 SUPERFAMILY SSF54675 32 138 3.77E-23 T 22-04-2016 RM25_RS06180 348332d272f5caacf8d35e031c5d4047 306 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 35 305 7.1E-90 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 RM25_RS06180 348332d272f5caacf8d35e031c5d4047 306 SUPERFAMILY SSF51690 139 305 7.06E-54 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RM25_RS06180 348332d272f5caacf8d35e031c5d4047 306 Gene3D G3DSA:3.90.1170.20 26 160 4.3E-40 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RM25_RS06180 348332d272f5caacf8d35e031c5d4047 306 Gene3D G3DSA:3.20.20.70 161 295 1.6E-54 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS06180 348332d272f5caacf8d35e031c5d4047 306 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 47 137 4.1E-20 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RM25_RS06180 348332d272f5caacf8d35e031c5d4047 306 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 139 304 2.5E-55 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RM25_RS06180 348332d272f5caacf8d35e031c5d4047 306 PIRSF PIRSF006250 27 306 5.8E-87 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RM25_RS06180 348332d272f5caacf8d35e031c5d4047 306 PANTHER PTHR32179 9 306 1.7E-102 T 22-04-2016 RM25_RS00655 ea391617569de548a28c4ffd1e6e9da5 1019 PANTHER PTHR30195:SF16 545 915 3.2E-139 T 22-04-2016 RM25_RS00655 ea391617569de548a28c4ffd1e6e9da5 1019 PANTHER PTHR30195:SF16 60 523 3.2E-139 T 22-04-2016 RM25_RS00655 ea391617569de548a28c4ffd1e6e9da5 1019 Pfam PF04851 Type III restriction enzyme, res subunit 293 461 7.1E-33 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RM25_RS00655 ea391617569de548a28c4ffd1e6e9da5 1019 SUPERFAMILY SSF52540 252 464 6.08E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00655 ea391617569de548a28c4ffd1e6e9da5 1019 SMART SM00487 290 491 1.3E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS00655 ea391617569de548a28c4ffd1e6e9da5 1019 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 753 1007 6.4E-60 T 22-04-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal RM25_RS00655 ea391617569de548a28c4ffd1e6e9da5 1019 Gene3D G3DSA:3.40.50.300 288 461 5.2E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00655 ea391617569de548a28c4ffd1e6e9da5 1019 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 47 749 1.3E-160 T 22-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 RM25_RS00655 ea391617569de548a28c4ffd1e6e9da5 1019 PANTHER PTHR30195 545 915 3.2E-139 T 22-04-2016 RM25_RS00655 ea391617569de548a28c4ffd1e6e9da5 1019 PANTHER PTHR30195 60 523 3.2E-139 T 22-04-2016 RM25_RS00655 ea391617569de548a28c4ffd1e6e9da5 1019 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 37 225 9.7E-44 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 RM25_RS09135 402cfa8b44e6a69906619ee66d24b89f 151 SUPERFAMILY SSF55298 1 150 8.17E-51 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RM25_RS09135 402cfa8b44e6a69906619ee66d24b89f 151 Gene3D G3DSA:3.30.1330.40 1 150 1.6E-56 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RM25_RS09135 402cfa8b44e6a69906619ee66d24b89f 151 PANTHER PTHR11803:SF2 1 151 3.3E-40 T 22-04-2016 RM25_RS09135 402cfa8b44e6a69906619ee66d24b89f 151 PANTHER PTHR11803 1 151 3.3E-40 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RM25_RS09135 402cfa8b44e6a69906619ee66d24b89f 151 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 7 150 1.3E-29 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RM25_RS09420 5628f3c74ba60da59bb56cfb1ec245e6 584 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 6 285 3.3E-71 T 22-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 RM25_RS09420 5628f3c74ba60da59bb56cfb1ec245e6 584 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 2 551 6.2E-224 T 22-04-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 RM25_RS09420 5628f3c74ba60da59bb56cfb1ec245e6 584 PANTHER PTHR10803 3 365 2.3E-65 T 22-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 RM25_RS09420 5628f3c74ba60da59bb56cfb1ec245e6 584 PIRSF PIRSF001327 1 578 9.9E-229 T 22-04-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 RM25_RS09420 5628f3c74ba60da59bb56cfb1ec245e6 584 Gene3D G3DSA:3.40.50.300 1 253 6.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09420 5628f3c74ba60da59bb56cfb1ec245e6 584 Gene3D G3DSA:3.40.50.300 311 550 6.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09420 5628f3c74ba60da59bb56cfb1ec245e6 584 PANTHER PTHR10803:SF0 3 365 2.3E-65 T 22-04-2016 RM25_RS09420 5628f3c74ba60da59bb56cfb1ec245e6 584 Pfam PF02374 Anion-transporting ATPase 3 284 7.5E-71 T 22-04-2016 IPR025723 Anion-transporting ATPase-like domain RM25_RS09420 5628f3c74ba60da59bb56cfb1ec245e6 584 Pfam PF02374 Anion-transporting ATPase 325 457 3.2E-29 T 22-04-2016 IPR025723 Anion-transporting ATPase-like domain RM25_RS09420 5628f3c74ba60da59bb56cfb1ec245e6 584 SUPERFAMILY SSF52540 1 233 8.44E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09420 5628f3c74ba60da59bb56cfb1ec245e6 584 SUPERFAMILY SSF52540 312 540 2.91E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 431 4.7E-137 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 SUPERFAMILY SSF53720 25 432 6.08E-65 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 PRINTS PR00083 Histidinol dehydrogenase signature 366 384 7.1E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 7.1E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 PRINTS PR00083 Histidinol dehydrogenase signature 204 229 7.1E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 PRINTS PR00083 Histidinol dehydrogenase signature 173 199 7.1E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 PRINTS PR00083 Histidinol dehydrogenase signature 136 162 7.1E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 7.1E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 7.1E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 PRINTS PR00083 Histidinol dehydrogenase signature 325 350 7.1E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 PANTHER PTHR21256 13 437 7.1E-164 T 22-04-2016 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 Pfam PF00815 Histidinol dehydrogenase 21 431 3.8E-149 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 432 37.135 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 PIRSF PIRSF000099 2 435 3.8E-147 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RM25_RS04985 d363a2206d7ccbe064f85b10aef5a00c 437 Gene3D G3DSA:3.40.50.1980 27 243 9.7E-70 T 22-04-2016 RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 SMART SM00322 199 266 8.1E-5 T 22-04-2016 IPR004087 K Homology domain GO:0003676 RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 SUPERFAMILY SSF109604 317 438 2.9E-24 T 22-04-2016 RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 TIGRFAM TIGR00277 HDIG: HDIG domain 323 399 2.2E-18 T 22-04-2016 IPR006675 HDIG domain RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 64 510 1.9E-162 T 22-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 Pfam PF00013 KH domain 204 251 5.0E-5 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 Pfam PF12072 Domain of unknown function (DUF3552) 72 196 1.8E-16 T 22-04-2016 IPR022711 Ribonuclease Y, N-terminal RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 Hamap MF_00335 Ribonuclease Y [rny]. 7 511 21.357 T 22-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 Pfam PF01966 HD domain 327 419 3.2E-16 T 22-04-2016 IPR006674 HD domain RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 Gene3D G3DSA:1.10.3210.10 312 486 1.3E-31 T 22-04-2016 IPR006674 HD domain RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 SMART SM00471 323 429 5.3E-9 T 22-04-2016 IPR003607 HD/PDEase domain RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 SUPERFAMILY SSF54791 200 278 6.69E-13 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 PANTHER PTHR12826 177 510 8.0E-101 T 22-04-2016 RM25_RS04340 1d5c9d1d97d14658286c20532d0b2901 511 Gene3D G3DSA:3.30.1370.10 211 265 1.4E-5 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RM25_RS05325 0d247117e8c96621f3236750c8b1aa61 544 Gene3D G3DSA:3.60.110.10 238 490 1.2E-16 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RM25_RS05325 0d247117e8c96621f3236750c8b1aa61 544 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 87 483 4.4E-55 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RM25_RS05325 0d247117e8c96621f3236750c8b1aa61 544 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 34 520 14.222 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RM25_RS05325 0d247117e8c96621f3236750c8b1aa61 544 Pfam PF00795 Carbon-nitrogen hydrolase 341 489 1.4E-10 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RM25_RS05325 0d247117e8c96621f3236750c8b1aa61 544 SUPERFAMILY SSF56317 242 498 3.92E-23 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RM25_RS05325 0d247117e8c96621f3236750c8b1aa61 544 PANTHER PTHR38686 26 539 7.5E-29 T 22-04-2016 RM25_RS11295 cfcd210697dd8cb3920a62026d51c4a7 231 Pfam PF00072 Response regulator receiver domain 9 118 3.7E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS11295 cfcd210697dd8cb3920a62026d51c4a7 231 PANTHER PTHR26402:SF50 7 228 1.0E-92 T 22-04-2016 RM25_RS11295 cfcd210697dd8cb3920a62026d51c4a7 231 SMART SM00448 7 117 6.3E-43 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS11295 cfcd210697dd8cb3920a62026d51c4a7 231 SMART SM00862 152 228 4.0E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS11295 cfcd210697dd8cb3920a62026d51c4a7 231 PANTHER PTHR26402 7 228 1.0E-92 T 22-04-2016 RM25_RS11295 cfcd210697dd8cb3920a62026d51c4a7 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 228 4.8E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS11295 cfcd210697dd8cb3920a62026d51c4a7 231 Gene3D G3DSA:3.40.50.2300 5 127 1.8E-38 T 22-04-2016 RM25_RS11295 cfcd210697dd8cb3920a62026d51c4a7 231 SUPERFAMILY SSF52172 7 186 6.19E-41 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS11295 cfcd210697dd8cb3920a62026d51c4a7 231 Gene3D G3DSA:1.10.10.10 135 228 1.6E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS04900 5392b18cbafba0d90f601095b66bdd38 326 Gene3D G3DSA:3.40.50.2300 36 161 3.8E-52 T 22-04-2016 RM25_RS04900 5392b18cbafba0d90f601095b66bdd38 326 Gene3D G3DSA:3.40.50.2300 162 293 1.7E-48 T 22-04-2016 RM25_RS04900 5392b18cbafba0d90f601095b66bdd38 326 Pfam PF04392 ABC transporter substrate binding protein 39 325 7.2E-88 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein RM25_RS04900 5392b18cbafba0d90f601095b66bdd38 326 PANTHER PTHR35271 35 326 5.6E-57 T 22-04-2016 RM25_RS04900 5392b18cbafba0d90f601095b66bdd38 326 SUPERFAMILY SSF53822 49 294 2.02E-13 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RM25_RS11320 1af421b077cc8eddcccb66c4f96e5ceb 161 Gene3D G3DSA:2.30.110.10 9 153 1.0E-40 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RM25_RS11320 1af421b077cc8eddcccb66c4f96e5ceb 161 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 10 150 6.6E-38 T 22-04-2016 RM25_RS11320 1af421b077cc8eddcccb66c4f96e5ceb 161 PANTHER PTHR34818 9 149 1.4E-27 T 22-04-2016 RM25_RS11320 1af421b077cc8eddcccb66c4f96e5ceb 161 SUPERFAMILY SSF50475 8 134 2.06E-28 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RM25_RS06750 e7b14391a59e475d2cc463c963abc1e6 199 PANTHER PTHR18895 3 196 9.6E-31 T 22-04-2016 RM25_RS06750 e7b14391a59e475d2cc463c963abc1e6 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 190 1.5E-37 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RM25_RS06750 e7b14391a59e475d2cc463c963abc1e6 199 Pfam PF03602 Conserved hypothetical protein 95 3 190 1.5E-42 T 22-04-2016 RM25_RS06750 e7b14391a59e475d2cc463c963abc1e6 199 SUPERFAMILY SSF53335 3 190 7.0E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS06750 e7b14391a59e475d2cc463c963abc1e6 199 Gene3D G3DSA:3.40.50.150 3 193 1.0E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS06750 e7b14391a59e475d2cc463c963abc1e6 199 PIRSF PIRSF004553 1 194 1.8E-44 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RM25_RS06750 e7b14391a59e475d2cc463c963abc1e6 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 125 131 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RM25_RS06750 e7b14391a59e475d2cc463c963abc1e6 199 PANTHER PTHR18895:SF60 3 196 9.6E-31 T 22-04-2016 RM25_RS07305 ed9108f52ec01f8aa149ff9c04d189e3 410 Pfam PF00817 impB/mucB/samB family 13 158 2.7E-43 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07305 ed9108f52ec01f8aa149ff9c04d189e3 410 Gene3D G3DSA:1.10.150.20 170 239 1.5E-19 T 22-04-2016 RM25_RS07305 ed9108f52ec01f8aa149ff9c04d189e3 410 SUPERFAMILY SSF56672 7 239 4.27E-74 T 22-04-2016 RM25_RS07305 ed9108f52ec01f8aa149ff9c04d189e3 410 Gene3D G3DSA:3.30.70.270 70 168 1.4E-27 T 22-04-2016 RM25_RS07305 ed9108f52ec01f8aa149ff9c04d189e3 410 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 352 2.2E-21 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07305 ed9108f52ec01f8aa149ff9c04d189e3 410 PANTHER PTHR11076 6 349 1.0E-113 T 22-04-2016 RM25_RS07305 ed9108f52ec01f8aa149ff9c04d189e3 410 Gene3D G3DSA:3.30.1490.100 247 350 5.9E-29 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07305 ed9108f52ec01f8aa149ff9c04d189e3 410 SUPERFAMILY SSF100879 245 343 8.24E-25 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS07305 ed9108f52ec01f8aa149ff9c04d189e3 410 Hamap MF_01113 DNA polymerase IV [dinB]. 7 369 33.35 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS00595 fb4c7a897cc237faf8797bb948457e68 114 Pfam PF01022 Bacterial regulatory protein, arsR family 28 74 5.2E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS00595 fb4c7a897cc237faf8797bb948457e68 114 SMART SM00418 21 103 6.2E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS00595 fb4c7a897cc237faf8797bb948457e68 114 SMART SM00419 32 85 0.0023 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RM25_RS00595 fb4c7a897cc237faf8797bb948457e68 114 SUPERFAMILY SSF46785 16 106 1.64E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS00595 fb4c7a897cc237faf8797bb948457e68 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.7E-8 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS00595 fb4c7a897cc237faf8797bb948457e68 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 23 38 1.7E-8 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS00595 fb4c7a897cc237faf8797bb948457e68 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 1.7E-8 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS00595 fb4c7a897cc237faf8797bb948457e68 114 PANTHER PTHR33154 22 112 2.2E-15 T 22-04-2016 RM25_RS00595 fb4c7a897cc237faf8797bb948457e68 114 Gene3D G3DSA:1.10.10.10 16 104 1.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08325 17270aaaa08726cea5cb6bfcdde110e1 139 Gene3D G3DSA:1.10.1660.10 14 105 7.7E-19 T 22-04-2016 RM25_RS08325 17270aaaa08726cea5cb6bfcdde110e1 139 SUPERFAMILY SSF46955 14 104 2.6E-15 T 22-04-2016 IPR009061 Putative DNA-binding domain RM25_RS08325 17270aaaa08726cea5cb6bfcdde110e1 139 PANTHER PTHR30204 6 106 5.8E-15 T 22-04-2016 RM25_RS08325 17270aaaa08726cea5cb6bfcdde110e1 139 Pfam PF13411 MerR HTH family regulatory protein 14 81 8.9E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS08325 17270aaaa08726cea5cb6bfcdde110e1 139 SMART SM00422 14 83 1.1E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS07095 a2b3febf93a7ab7179840b7bc40f0db2 290 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 9 289 39.766 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 RM25_RS07095 a2b3febf93a7ab7179840b7bc40f0db2 290 PANTHER PTHR30448:SF0 2 290 3.1E-130 T 22-04-2016 RM25_RS07095 a2b3febf93a7ab7179840b7bc40f0db2 290 SUPERFAMILY SSF52540 7 160 2.48E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07095 a2b3febf93a7ab7179840b7bc40f0db2 290 PANTHER PTHR30448 2 290 3.1E-130 T 22-04-2016 RM25_RS07095 a2b3febf93a7ab7179840b7bc40f0db2 290 PIRSF PIRSF005052 9 290 4.9E-103 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 RM25_RS07095 a2b3febf93a7ab7179840b7bc40f0db2 290 Pfam PF03668 P-loop ATPase protein family 12 288 3.1E-102 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 RM25_RS07095 a2b3febf93a7ab7179840b7bc40f0db2 290 Gene3D G3DSA:3.40.50.300 3 160 1.2E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 SUPERFAMILY SSF46894 164 231 5.1E-23 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 Pfam PF00196 Bacterial regulatory proteins, luxR family 171 226 5.7E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 Pfam PF00072 Response regulator receiver domain 21 134 3.7E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 SUPERFAMILY SSF52172 18 152 1.02E-27 T 22-04-2016 IPR011006 CheY-like superfamily RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 SMART SM00448 19 134 3.7E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 SMART SM00421 169 226 1.8E-25 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 ProSitePatterns PS00622 LuxR-type HTH domain signature. 186 213 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 PANTHER PTHR26402 19 226 3.4E-61 T 22-04-2016 RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 PANTHER PTHR26402:SF151 19 226 3.4E-61 T 22-04-2016 RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 Gene3D G3DSA:1.10.10.10 139 232 1.2E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 186 3.77E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 214 3.77E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 202 3.77E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RM25_RS03105 5f155dcc423f27383c07c2194bd7a35e 232 Gene3D G3DSA:3.40.50.2300 18 138 6.5E-30 T 22-04-2016 RM25_RS08185 bb2744357cbd9e4c88aae3f202e94478 795 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 8 249 1.3E-39 T 22-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 RM25_RS08185 bb2744357cbd9e4c88aae3f202e94478 795 SUPERFAMILY SSF48208 275 744 3.06E-20 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RM25_RS08185 bb2744357cbd9e4c88aae3f202e94478 795 Gene3D G3DSA:2.70.98.50 9 346 1.0E-36 T 22-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 RM25_RS08185 bb2744357cbd9e4c88aae3f202e94478 795 PANTHER PTHR31084 4 793 1.2E-64 T 22-04-2016 RM25_RS08510 10408b1bacd8b34bd3e76ecba54e826b 112 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 79 88 2.2E-5 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RM25_RS08510 10408b1bacd8b34bd3e76ecba54e826b 112 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 3 17 2.2E-5 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RM25_RS08510 10408b1bacd8b34bd3e76ecba54e826b 112 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 69 77 2.2E-5 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RM25_RS08510 10408b1bacd8b34bd3e76ecba54e826b 112 PANTHER PTHR30266 2 112 2.3E-20 T 22-04-2016 RM25_RS08510 10408b1bacd8b34bd3e76ecba54e826b 112 PANTHER PTHR30266:SF2 2 112 2.3E-20 T 22-04-2016 RM25_RS08510 10408b1bacd8b34bd3e76ecba54e826b 112 SUPERFAMILY SSF81330 9 110 8.76E-21 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RM25_RS08510 10408b1bacd8b34bd3e76ecba54e826b 112 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 112 4.4E-28 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RM25_RS08510 10408b1bacd8b34bd3e76ecba54e826b 112 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 2 112 7.8E-21 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RM25_RS10780 f0b0bfd5a5a92320749372a570c990da 262 SUPERFAMILY SSF51395 14 213 3.06E-61 T 22-04-2016 RM25_RS10780 f0b0bfd5a5a92320749372a570c990da 262 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 20 213 1.4E-37 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RM25_RS10780 f0b0bfd5a5a92320749372a570c990da 262 Gene3D G3DSA:3.20.20.70 12 213 2.4E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS10780 f0b0bfd5a5a92320749372a570c990da 262 PANTHER PTHR22893:SF6 2 213 1.2E-86 T 22-04-2016 RM25_RS10780 f0b0bfd5a5a92320749372a570c990da 262 PANTHER PTHR22893 2 213 1.2E-86 T 22-04-2016 RM25_RS08060 0cf76a670a91902381e467439c73a484 212 Gene3D G3DSA:1.10.357.10 87 200 3.6E-8 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS08060 0cf76a670a91902381e467439c73a484 212 Gene3D G3DSA:1.10.10.60 21 73 2.7E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS08060 0cf76a670a91902381e467439c73a484 212 PANTHER PTHR30055 18 209 2.5E-18 T 22-04-2016 RM25_RS08060 0cf76a670a91902381e467439c73a484 212 PANTHER PTHR30055:SF54 18 209 2.5E-18 T 22-04-2016 RM25_RS08060 0cf76a670a91902381e467439c73a484 212 SUPERFAMILY SSF46689 22 78 2.29E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS08060 0cf76a670a91902381e467439c73a484 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 77 1.1E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS07280 15b416c9c69f8522d450e6f7931245a4 624 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 247 1.4E-13 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RM25_RS07280 15b416c9c69f8522d450e6f7931245a4 624 SUPERFAMILY SSF56601 266 610 1.69E-83 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS07280 15b416c9c69f8522d450e6f7931245a4 624 PANTHER PTHR30627:SF1 3 612 3.5E-127 T 22-04-2016 RM25_RS07280 15b416c9c69f8522d450e6f7931245a4 624 Pfam PF00905 Penicillin binding protein transpeptidase domain 291 599 1.1E-68 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RM25_RS07280 15b416c9c69f8522d450e6f7931245a4 624 Gene3D G3DSA:3.40.710.10 273 603 3.4E-81 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS07280 15b416c9c69f8522d450e6f7931245a4 624 PANTHER PTHR30627 3 612 3.5E-127 T 22-04-2016 RM25_RS07280 15b416c9c69f8522d450e6f7931245a4 624 Gene3D G3DSA:3.90.1310.10 176 272 9.6E-24 T 22-04-2016 RM25_RS07280 15b416c9c69f8522d450e6f7931245a4 624 SUPERFAMILY SSF56519 65 265 3.4E-28 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RM25_RS05915 6f5662ad3d4bd4adc2cf209af5f76fbd 158 Gene3D G3DSA:3.30.530.20 1 135 6.1E-7 T 22-04-2016 IPR023393 START-like domain RM25_RS05915 6f5662ad3d4bd4adc2cf209af5f76fbd 158 Pfam PF10698 Protein of unknown function (DUF2505) 5 153 3.6E-33 T 22-04-2016 IPR019639 Protein of unknown function DUF2505 RM25_RS05915 6f5662ad3d4bd4adc2cf209af5f76fbd 158 SUPERFAMILY SSF55961 2 143 1.03E-8 T 22-04-2016 RM25_RS03825 13b1921e629c31ef8ed24c2ecd8a5999 104 PANTHER PTHR30561:SF0 1 103 2.0E-33 T 22-04-2016 RM25_RS03825 13b1921e629c31ef8ed24c2ecd8a5999 104 PANTHER PTHR30561 1 103 2.0E-33 T 22-04-2016 RM25_RS03825 13b1921e629c31ef8ed24c2ecd8a5999 104 SUPERFAMILY SSF103481 5 101 2.35E-14 T 22-04-2016 RM25_RS03825 13b1921e629c31ef8ed24c2ecd8a5999 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 3.4E-22 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 RM25_RS06160 2c7070cc6b0e46c9c1081b0d911646fe 219 Gene3D G3DSA:1.20.950.10 3 202 3.5E-15 T 22-04-2016 RM25_RS06160 2c7070cc6b0e46c9c1081b0d911646fe 219 SUPERFAMILY SSF81343 1 218 7.72E-34 T 22-04-2016 RM25_RS06160 2c7070cc6b0e46c9c1081b0d911646fe 219 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 1 217 1.2E-35 T 22-04-2016 IPR011138 Succinate dehydrogenase cytochrome b558 subunit UniPathway: UPA00223 RM25_RS06620 ccd4ab0fd4bc05ecad279ba8044caa83 300 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 66 291 7.7E-58 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RM25_RS06620 ccd4ab0fd4bc05ecad279ba8044caa83 300 Pfam PF02481 DNA recombination-mediator protein A 68 287 3.9E-63 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RM25_RS06620 ccd4ab0fd4bc05ecad279ba8044caa83 300 PANTHER PTHR32039:SF8 18 291 1.6E-63 T 22-04-2016 RM25_RS06620 ccd4ab0fd4bc05ecad279ba8044caa83 300 Gene3D G3DSA:3.40.50.450 120 265 1.5E-12 T 22-04-2016 RM25_RS06620 ccd4ab0fd4bc05ecad279ba8044caa83 300 SUPERFAMILY SSF102405 115 292 1.53E-29 T 22-04-2016 RM25_RS06620 ccd4ab0fd4bc05ecad279ba8044caa83 300 PANTHER PTHR32039 18 291 1.6E-63 T 22-04-2016 RM25_RS02890 5f61184f6e1c3fe8d946ad0e726fd571 614 Gene3D G3DSA:3.40.50.10490 246 444 1.2E-75 T 22-04-2016 RM25_RS02890 5f61184f6e1c3fe8d946ad0e726fd571 614 SUPERFAMILY SSF53697 247 614 2.6E-111 T 22-04-2016 RM25_RS02890 5f61184f6e1c3fe8d946ad0e726fd571 614 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 614 39.827 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RM25_RS02890 5f61184f6e1c3fe8d946ad0e726fd571 614 SUPERFAMILY SSF56235 2 235 1.03E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RM25_RS02890 5f61184f6e1c3fe8d946ad0e726fd571 614 PANTHER PTHR10937:SF0 1 614 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RM25_RS02890 5f61184f6e1c3fe8d946ad0e726fd571 614 Gene3D G3DSA:3.40.50.10490 445 614 2.1E-62 T 22-04-2016 RM25_RS02890 5f61184f6e1c3fe8d946ad0e726fd571 614 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 614 4.0E-247 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RM25_RS02890 5f61184f6e1c3fe8d946ad0e726fd571 614 Gene3D G3DSA:3.60.20.10 2 242 1.6E-76 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RM25_RS02890 5f61184f6e1c3fe8d946ad0e726fd571 614 Pfam PF13522 Glutamine amidotransferase domain 65 194 3.9E-23 T 22-04-2016 RM25_RS02890 5f61184f6e1c3fe8d946ad0e726fd571 614 PANTHER PTHR10937 1 614 0.0 T 22-04-2016 RM25_RS02890 5f61184f6e1c3fe8d946ad0e726fd571 614 Pfam PF01380 SIS domain 292 417 1.6E-34 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RM25_RS02890 5f61184f6e1c3fe8d946ad0e726fd571 614 Pfam PF01380 SIS domain 466 595 1.2E-21 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RM25_RS07730 03b03f270180606ff96907afe3214deb 589 Gene3D G3DSA:1.20.1250.20 45 223 7.4E-31 T 22-04-2016 RM25_RS07730 03b03f270180606ff96907afe3214deb 589 PANTHER PTHR23501 4 224 3.2E-103 T 22-04-2016 RM25_RS07730 03b03f270180606ff96907afe3214deb 589 PANTHER PTHR23501 524 589 3.2E-103 T 22-04-2016 RM25_RS07730 03b03f270180606ff96907afe3214deb 589 PANTHER PTHR23501 299 502 3.2E-103 T 22-04-2016 RM25_RS07730 03b03f270180606ff96907afe3214deb 589 PANTHER PTHR23501 251 280 3.2E-103 T 22-04-2016 RM25_RS07730 03b03f270180606ff96907afe3214deb 589 Pfam PF07690 Major Facilitator Superfamily 52 317 1.4E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS07730 03b03f270180606ff96907afe3214deb 589 Gene3D G3DSA:1.20.1250.20 345 519 2.5E-11 T 22-04-2016 RM25_RS07730 03b03f270180606ff96907afe3214deb 589 SUPERFAMILY SSF103473 39 313 1.44E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS07730 03b03f270180606ff96907afe3214deb 589 SUPERFAMILY SSF103473 284 494 5.89E-17 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS07730 03b03f270180606ff96907afe3214deb 589 SUPERFAMILY SSF103473 557 585 5.89E-17 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 PANTHER PTHR24221 42 107 0.0 T 22-04-2016 RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 PANTHER PTHR24221 149 673 0.0 T 22-04-2016 RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 Pfam PF00664 ABC transporter transmembrane region 92 384 1.1E-58 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 Gene3D G3DSA:3.40.50.300 428 659 9.3E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 Pfam PF00005 ABC transporter 446 594 7.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 SMART SM00382 454 646 8.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 PANTHER PTHR24221:SF271 42 107 0.0 T 22-04-2016 RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 PANTHER PTHR24221:SF271 149 673 0.0 T 22-04-2016 RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 ProSitePatterns PS00211 ABC transporters family signature. 566 580 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 SUPERFAMILY SSF52540 421 665 4.05E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 SUPERFAMILY SSF90123 59 98 2.88E-82 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 SUPERFAMILY SSF90123 138 410 2.88E-82 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS00965 c77f87c2d74203b1987aa7cc94670afc 687 Gene3D G3DSA:1.20.1560.10 59 412 2.8E-84 T 22-04-2016 RM25_RS10070 c43e34b99d0bc48d9fd0a099f83ca620 226 Gene3D G3DSA:3.40.50.150 15 152 4.5E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS10070 c43e34b99d0bc48d9fd0a099f83ca620 226 SUPERFAMILY SSF53335 75 179 1.53E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS10070 c43e34b99d0bc48d9fd0a099f83ca620 226 SUPERFAMILY SSF53335 10 47 1.53E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS10070 c43e34b99d0bc48d9fd0a099f83ca620 226 Pfam PF08241 Methyltransferase domain 77 146 7.7E-16 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RM25_RS10070 c43e34b99d0bc48d9fd0a099f83ca620 226 PANTHER PTHR10108 210 221 1.0E-23 T 22-04-2016 RM25_RS10070 c43e34b99d0bc48d9fd0a099f83ca620 226 PANTHER PTHR10108 3 55 1.0E-23 T 22-04-2016 RM25_RS10070 c43e34b99d0bc48d9fd0a099f83ca620 226 PANTHER PTHR10108 79 155 1.0E-23 T 22-04-2016 RM25_RS11830 970034169a6223514fc85f28d97f8909 284 PANTHER PTHR30603 20 273 3.2E-14 T 22-04-2016 RM25_RS11830 970034169a6223514fc85f28d97f8909 284 Gene3D G3DSA:1.10.601.10 22 139 2.4E-15 T 22-04-2016 RM25_RS11830 970034169a6223514fc85f28d97f8909 284 SUPERFAMILY SSF88946 22 136 1.49E-18 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS11830 970034169a6223514fc85f28d97f8909 284 PRINTS PR00046 Major sigma-70 factor signature 248 263 2.6E-8 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS11830 970034169a6223514fc85f28d97f8909 284 PRINTS PR00046 Major sigma-70 factor signature 263 274 2.6E-8 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS11830 970034169a6223514fc85f28d97f8909 284 PRINTS PR00046 Major sigma-70 factor signature 100 113 2.6E-8 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS11830 970034169a6223514fc85f28d97f8909 284 PRINTS PR00046 Major sigma-70 factor signature 227 239 2.6E-8 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS11830 970034169a6223514fc85f28d97f8909 284 Pfam PF04545 Sigma-70, region 4 224 273 8.3E-11 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS11830 970034169a6223514fc85f28d97f8909 284 Gene3D G3DSA:1.10.10.10 223 275 3.5E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS11830 970034169a6223514fc85f28d97f8909 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 100 113 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS11830 970034169a6223514fc85f28d97f8909 284 SUPERFAMILY SSF88659 222 273 1.05E-10 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS11830 970034169a6223514fc85f28d97f8909 284 Pfam PF04542 Sigma-70 region 2 76 128 1.1E-5 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS08750 aea417b2b5e182b4060320b80f4b1b16 225 SUPERFAMILY SSF48008 91 224 2.28E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RM25_RS08750 aea417b2b5e182b4060320b80f4b1b16 225 SUPERFAMILY SSF46785 5 72 3.23E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08750 aea417b2b5e182b4060320b80f4b1b16 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS08750 aea417b2b5e182b4060320b80f4b1b16 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS08750 aea417b2b5e182b4060320b80f4b1b16 225 Gene3D G3DSA:1.10.10.10 9 74 2.9E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08750 aea417b2b5e182b4060320b80f4b1b16 225 SMART SM00345 7 68 8.3E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS08750 aea417b2b5e182b4060320b80f4b1b16 225 PANTHER PTHR11751 86 109 1.7E-15 T 22-04-2016 RM25_RS08750 aea417b2b5e182b4060320b80f4b1b16 225 PANTHER PTHR11751 11 70 1.7E-15 T 22-04-2016 RM25_RS08750 aea417b2b5e182b4060320b80f4b1b16 225 Pfam PF07729 FCD domain 93 217 1.5E-22 T 22-04-2016 IPR011711 GntR, C-terminal RM25_RS08750 aea417b2b5e182b4060320b80f4b1b16 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 62 1.8E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RM25_RS08750 aea417b2b5e182b4060320b80f4b1b16 225 Gene3D G3DSA:1.20.120.530 90 224 9.2E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RM25_RS08750 aea417b2b5e182b4060320b80f4b1b16 225 SMART SM00895 93 218 5.8E-21 T 22-04-2016 IPR011711 GntR, C-terminal RM25_RS05230 11ca371a7c304b6dbe3aec791e1d455c 241 SUPERFAMILY SSF56235 10 221 2.87E-32 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RM25_RS05230 11ca371a7c304b6dbe3aec791e1d455c 241 PANTHER PTHR11599:SF38 1 225 1.3E-18 T 22-04-2016 RM25_RS05230 11ca371a7c304b6dbe3aec791e1d455c 241 Pfam PF00227 Proteasome subunit 25 214 3.7E-19 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 RM25_RS05230 11ca371a7c304b6dbe3aec791e1d455c 241 Gene3D G3DSA:3.60.20.10 1 238 4.3E-72 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RM25_RS05230 11ca371a7c304b6dbe3aec791e1d455c 241 TIGRFAM TIGR03691 20S_bact_alpha: proteasome, alpha subunit 1 237 1.3E-88 T 22-04-2016 IPR022296 Proteasome, alpha subunit, bacterial GO:0004298|GO:0019773|GO:0051603 UniPathway: UPA00997 RM25_RS05230 11ca371a7c304b6dbe3aec791e1d455c 241 PANTHER PTHR11599 1 225 1.3E-18 T 22-04-2016 RM25_RS10880 7bb13bf0d4b3c5b66fc45e62f885f01c 672 PANTHER PTHR11935:SF93 84 245 4.2E-129 T 22-04-2016 RM25_RS10880 7bb13bf0d4b3c5b66fc45e62f885f01c 672 PANTHER PTHR11935:SF93 262 490 4.2E-129 T 22-04-2016 RM25_RS10880 7bb13bf0d4b3c5b66fc45e62f885f01c 672 SMART SM00849 134 361 6.9E-8 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS10880 7bb13bf0d4b3c5b66fc45e62f885f01c 672 SUPERFAMILY SSF56281 30 541 2.52E-118 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS10880 7bb13bf0d4b3c5b66fc45e62f885f01c 672 Pfam PF14864 Alkyl sulfatase C-terminal 552 637 1.2E-10 T 22-04-2016 IPR029229 Alkyl sulfatase, C-terminal RM25_RS10880 7bb13bf0d4b3c5b66fc45e62f885f01c 672 Gene3D G3DSA:3.60.15.10 268 395 1.2E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS10880 7bb13bf0d4b3c5b66fc45e62f885f01c 672 Gene3D G3DSA:3.60.15.10 122 226 1.2E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS10880 7bb13bf0d4b3c5b66fc45e62f885f01c 672 Pfam PF00753 Metallo-beta-lactamase superfamily 130 361 3.4E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS10880 7bb13bf0d4b3c5b66fc45e62f885f01c 672 Pfam PF14863 Alkyl sulfatase dimerisation 402 540 4.5E-51 T 22-04-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 RM25_RS10880 7bb13bf0d4b3c5b66fc45e62f885f01c 672 PANTHER PTHR11935 84 245 4.2E-129 T 22-04-2016 RM25_RS10880 7bb13bf0d4b3c5b66fc45e62f885f01c 672 PANTHER PTHR11935 262 490 4.2E-129 T 22-04-2016 RM25_RS04735 91717b9a1ca607427d2ee567bc6a8da5 270 SMART SM00382 32 225 5.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS04735 91717b9a1ca607427d2ee567bc6a8da5 270 SUPERFAMILY SSF52540 13 196 8.75E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04735 91717b9a1ca607427d2ee567bc6a8da5 270 Pfam PF00005 ABC transporter 26 167 4.8E-8 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS04735 91717b9a1ca607427d2ee567bc6a8da5 270 Gene3D G3DSA:3.40.50.300 7 196 1.3E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07160 c20648385f9d0e28e8b4cb7e51c20432 258 Pfam PF01048 Phosphorylase superfamily 37 244 2.6E-25 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RM25_RS07160 c20648385f9d0e28e8b4cb7e51c20432 258 Gene3D G3DSA:3.40.50.1580 68 255 7.1E-39 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RM25_RS07160 c20648385f9d0e28e8b4cb7e51c20432 258 SUPERFAMILY SSF53167 67 254 9.82E-41 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RM25_RS05300 48a5a3ba43578ebebb49be989a1b1f3c 252 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 244 3.2E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS05300 48a5a3ba43578ebebb49be989a1b1f3c 252 SUPERFAMILY SSF161098 62 243 1.57E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS05300 48a5a3ba43578ebebb49be989a1b1f3c 252 PANTHER PTHR30151 16 251 4.9E-50 T 22-04-2016 RM25_RS05300 48a5a3ba43578ebebb49be989a1b1f3c 252 Gene3D G3DSA:1.10.3720.10 62 246 2.4E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS02325 af4a459afc1a75a0936c094f84c91397 366 PANTHER PTHR11236:SF21 105 359 4.6E-39 T 22-04-2016 RM25_RS02325 af4a459afc1a75a0936c094f84c91397 366 Pfam PF00425 chorismate binding enzyme 107 348 2.8E-41 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RM25_RS02325 af4a459afc1a75a0936c094f84c91397 366 PANTHER PTHR11236 105 359 4.6E-39 T 22-04-2016 RM25_RS02325 af4a459afc1a75a0936c094f84c91397 366 SUPERFAMILY SSF56322 12 363 7.72E-50 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RM25_RS02325 af4a459afc1a75a0936c094f84c91397 366 Gene3D G3DSA:3.60.120.10 10 363 2.3E-49 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RM25_RS07720 b1373b6bec38e3327e086e4d78c03e50 217 SUPERFAMILY SSF102462 127 215 8.89E-12 T 22-04-2016 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 RM25_RS07720 b1373b6bec38e3327e086e4d78c03e50 217 Gene3D G3DSA:3.40.1490.10 128 179 3.4E-7 T 22-04-2016 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 RM25_RS07720 b1373b6bec38e3327e086e4d78c03e50 217 Pfam PF01981 Peptidyl-tRNA hydrolase PTH2 135 174 3.6E-5 T 22-04-2016 IPR002833 Peptidyl-tRNA hydrolase, PTH2 GO:0004045 MetaCyc: PWY-6308 RM25_RS04830 eece351aad1cd943ef53c3fb7f643190 98 Gene3D G3DSA:3.10.180.10 9 98 2.4E-6 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RM25_RS04830 eece351aad1cd943ef53c3fb7f643190 98 SUPERFAMILY SSF54593 13 96 9.49E-7 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RM25_RS08815 994f015a93cb25fde804cf92f2a378d7 225 SUPERFAMILY SSF109755 2 218 1.47E-52 T 22-04-2016 RM25_RS08815 994f015a93cb25fde804cf92f2a378d7 225 PANTHER PTHR10010:SF14 1 221 4.9E-47 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RM25_RS08815 994f015a93cb25fde804cf92f2a378d7 225 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 5 216 2.4E-49 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RM25_RS08815 994f015a93cb25fde804cf92f2a378d7 225 Pfam PF01895 PhoU domain 122 208 3.7E-15 T 22-04-2016 IPR026022 PhoU domain RM25_RS08815 994f015a93cb25fde804cf92f2a378d7 225 Pfam PF01895 PhoU domain 17 103 5.0E-16 T 22-04-2016 IPR026022 PhoU domain RM25_RS08815 994f015a93cb25fde804cf92f2a378d7 225 PANTHER PTHR10010 1 221 4.9E-47 T 22-04-2016 RM25_RS08815 994f015a93cb25fde804cf92f2a378d7 225 Gene3D G3DSA:1.20.58.220 111 215 4.7E-20 T 22-04-2016 RM25_RS08815 994f015a93cb25fde804cf92f2a378d7 225 Gene3D G3DSA:1.20.58.220 1 105 3.8E-26 T 22-04-2016 RM25_RS08815 994f015a93cb25fde804cf92f2a378d7 225 PIRSF PIRSF003107 1 221 1.9E-54 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RM25_RS03135 b92fab7872c28e2d8d215d81118728e4 251 Pfam PF00005 ABC transporter 20 164 4.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS03135 b92fab7872c28e2d8d215d81118728e4 251 SUPERFAMILY SSF52540 2 226 3.39E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03135 b92fab7872c28e2d8d215d81118728e4 251 SMART SM00382 26 213 4.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS03135 b92fab7872c28e2d8d215d81118728e4 251 PANTHER PTHR24220:SF471 3 243 9.5E-133 T 22-04-2016 RM25_RS03135 b92fab7872c28e2d8d215d81118728e4 251 PANTHER PTHR24220 3 243 9.5E-133 T 22-04-2016 RM25_RS03135 b92fab7872c28e2d8d215d81118728e4 251 Gene3D G3DSA:3.40.50.300 2 226 8.4E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09330 3db2cc1f17503dedd9e448f5e5f28be6 167 PANTHER PTHR15854 6 167 6.6E-44 T 22-04-2016 RM25_RS09330 3db2cc1f17503dedd9e448f5e5f28be6 167 SUPERFAMILY SSF50814 8 164 2.26E-43 T 22-04-2016 IPR011038 Calycin-like RM25_RS09330 3db2cc1f17503dedd9e448f5e5f28be6 167 Hamap MF_01297 UPF0678 fatty acid-binding protein-like protein . 5 166 31.208 T 22-04-2016 IPR022939 Uncharacterised protein family UPF0678 RM25_RS09330 3db2cc1f17503dedd9e448f5e5f28be6 167 Pfam PF08768 Domain of unknown function (DUF1794) 13 164 7.3E-47 T 22-04-2016 IPR014878 Domain of unknown function DUF1794 RM25_RS09330 3db2cc1f17503dedd9e448f5e5f28be6 167 PANTHER PTHR15854:SF6 6 167 6.6E-44 T 22-04-2016 RM25_RS05830 98c6b7cf26d3de484d7ba06b50139958 185 Pfam PF01863 Protein of unknown function DUF45 103 161 4.2E-21 T 22-04-2016 IPR002725 Protein of unknown function DUF45 RM25_RS05830 98c6b7cf26d3de484d7ba06b50139958 185 PANTHER PTHR30399:SF3 23 172 8.8E-27 T 22-04-2016 RM25_RS05830 98c6b7cf26d3de484d7ba06b50139958 185 PANTHER PTHR30399 23 172 8.8E-27 T 22-04-2016 RM25_RS08000 21c9d915e1d149bdf6eeb236267e37e0 204 Gene3D G3DSA:3.40.50.1000 1 196 2.6E-31 T 22-04-2016 IPR023214 HAD-like domain RM25_RS08000 21c9d915e1d149bdf6eeb236267e37e0 204 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 130 184 4.2E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS08000 21c9d915e1d149bdf6eeb236267e37e0 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 1.6E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS08000 21c9d915e1d149bdf6eeb236267e37e0 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 1.6E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS08000 21c9d915e1d149bdf6eeb236267e37e0 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 1.6E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS08000 21c9d915e1d149bdf6eeb236267e37e0 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.6E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS08000 21c9d915e1d149bdf6eeb236267e37e0 204 SUPERFAMILY SSF56784 1 190 1.09E-30 T 22-04-2016 IPR023214 HAD-like domain RM25_RS08000 21c9d915e1d149bdf6eeb236267e37e0 204 PANTHER PTHR12725:SF63 67 193 1.5E-19 T 22-04-2016 RM25_RS08000 21c9d915e1d149bdf6eeb236267e37e0 204 PANTHER PTHR12725 67 193 1.5E-19 T 22-04-2016 RM25_RS08000 21c9d915e1d149bdf6eeb236267e37e0 204 Pfam PF13419 Haloacid dehalogenase-like hydrolase 91 184 8.6E-11 T 22-04-2016 IPR023214 HAD-like domain RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 PANTHER PTHR11766 2 415 5.0E-172 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 6.4E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 6.4E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 6.4E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 6.4E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 Gene3D G3DSA:3.40.50.620 3 230 9.3E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 Pfam PF00579 tRNA synthetases class I (W and Y) 32 321 3.7E-71 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 SUPERFAMILY SSF55174 324 415 3.27E-16 T 22-04-2016 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 Gene3D G3DSA:3.10.290.10 315 420 2.2E-29 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 414 1.8E-104 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 420 41.978 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 PANTHER PTHR11766:SF0 2 415 5.0E-172 T 22-04-2016 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 Gene3D G3DSA:1.10.240.10 231 314 2.9E-37 T 22-04-2016 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 Pfam PF01479 S4 domain 358 397 4.1E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS06480 57c486225002711a19da29e7f4f0d5db 422 SUPERFAMILY SSF52374 4 321 3.94E-91 T 22-04-2016 RM25_RS00750 92ad611026716690d6738ad24d8d3a47 248 Pfam PF02146 Sir2 family 21 197 1.7E-51 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 RM25_RS00750 92ad611026716690d6738ad24d8d3a47 248 Gene3D G3DSA:3.40.50.1220 85 122 2.6E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS00750 92ad611026716690d6738ad24d8d3a47 248 Gene3D G3DSA:3.40.50.1220 173 243 2.6E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS00750 92ad611026716690d6738ad24d8d3a47 248 Gene3D G3DSA:3.40.50.1220 4 31 2.6E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS00750 92ad611026716690d6738ad24d8d3a47 248 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 5 240 61.993 T 22-04-2016 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 RM25_RS00750 92ad611026716690d6738ad24d8d3a47 248 Gene3D G3DSA:3.30.1600.10 123 166 8.1E-26 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain RM25_RS00750 92ad611026716690d6738ad24d8d3a47 248 Gene3D G3DSA:3.30.1600.10 32 75 8.1E-26 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain RM25_RS00750 92ad611026716690d6738ad24d8d3a47 248 PANTHER PTHR11085 4 242 5.6E-82 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 RM25_RS00750 92ad611026716690d6738ad24d8d3a47 248 SUPERFAMILY SSF52467 3 243 2.94E-82 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS10810 54a3a9a8cb36e898bf9771cd8315916a 293 SUPERFAMILY SSF52317 15 202 3.0E-14 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS10810 54a3a9a8cb36e898bf9771cd8315916a 293 Gene3D G3DSA:3.40.50.880 72 227 3.9E-14 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS09605 5fa08fb3a0e1b7170c94a2a967a4e907 453 PANTHER PTHR11730 5 453 1.7E-162 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RM25_RS09605 5fa08fb3a0e1b7170c94a2a967a4e907 453 ProSitePatterns PS01219 Ammonium transporters signature. 170 195 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RM25_RS09605 5fa08fb3a0e1b7170c94a2a967a4e907 453 SUPERFAMILY SSF111352 7 395 5.36E-115 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RM25_RS09605 5fa08fb3a0e1b7170c94a2a967a4e907 453 PANTHER PTHR11730:SF17 5 453 1.7E-162 T 22-04-2016 RM25_RS09605 5fa08fb3a0e1b7170c94a2a967a4e907 453 TIGRFAM TIGR00836 amt: ammonium transporter 10 414 1.2E-131 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RM25_RS09605 5fa08fb3a0e1b7170c94a2a967a4e907 453 Gene3D G3DSA:1.10.3430.10 6 395 6.5E-130 T 22-04-2016 IPR029020 Ammonium/urea transporter RM25_RS09605 5fa08fb3a0e1b7170c94a2a967a4e907 453 Pfam PF00909 Ammonium Transporter Family 12 414 2.8E-122 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RM25_RS02375 beda8e5215d91b48487832a8778aae24 190 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 6 135 1.7E-39 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RM25_RS02375 beda8e5215d91b48487832a8778aae24 190 PANTHER PTHR10849:SF13 6 138 1.1E-50 T 22-04-2016 RM25_RS02375 beda8e5215d91b48487832a8778aae24 190 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 145 25.963 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RM25_RS02375 beda8e5215d91b48487832a8778aae24 190 Gene3D G3DSA:1.10.1060.10 7 127 2.3E-18 T 22-04-2016 RM25_RS02375 beda8e5215d91b48487832a8778aae24 190 SUPERFAMILY SSF54862 33 140 1.76E-25 T 22-04-2016 RM25_RS02375 beda8e5215d91b48487832a8778aae24 190 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 97 108 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS02375 beda8e5215d91b48487832a8778aae24 190 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 52 63 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RM25_RS02375 beda8e5215d91b48487832a8778aae24 190 Pfam PF12838 4Fe-4S dicluster domain 51 111 6.6E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RM25_RS02375 beda8e5215d91b48487832a8778aae24 190 PANTHER PTHR10849 6 138 1.1E-50 T 22-04-2016 RM25_RS06980 cf07faafbd63d88b3db76bb3093a66c7 249 PANTHER PTHR24220 5 245 7.0E-110 T 22-04-2016 RM25_RS06980 cf07faafbd63d88b3db76bb3093a66c7 249 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 246 2.7E-96 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 RM25_RS06980 cf07faafbd63d88b3db76bb3093a66c7 249 SUPERFAMILY SSF52540 4 232 1.15E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06980 cf07faafbd63d88b3db76bb3093a66c7 249 PANTHER PTHR24220:SF85 5 245 7.0E-110 T 22-04-2016 RM25_RS06980 cf07faafbd63d88b3db76bb3093a66c7 249 SMART SM00382 32 226 4.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS06980 cf07faafbd63d88b3db76bb3093a66c7 249 Pfam PF00005 ABC transporter 23 173 3.2E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS06980 cf07faafbd63d88b3db76bb3093a66c7 249 Gene3D G3DSA:3.40.50.300 4 234 8.7E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09670 e046db131787ff911b175779c395fe8a 505 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 235 241 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RM25_RS09670 e046db131787ff911b175779c395fe8a 505 SUPERFAMILY SSF53335 165 320 3.44E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09670 e046db131787ff911b175779c395fe8a 505 Pfam PF05175 Methyltransferase small domain 158 288 2.6E-17 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RM25_RS09670 e046db131787ff911b175779c395fe8a 505 Gene3D G3DSA:3.40.50.150 158 323 1.1E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09670 e046db131787ff911b175779c395fe8a 505 PANTHER PTHR18895 172 355 5.0E-23 T 22-04-2016 RM25_RS00645 26ed6d1c2b929163e093adb3e72ca8fc 287 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 136 220 1.2E-16 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RM25_RS00645 26ed6d1c2b929163e093adb3e72ca8fc 287 PANTHER PTHR22993:SF16 1 272 7.1E-109 T 22-04-2016 RM25_RS00645 26ed6d1c2b929163e093adb3e72ca8fc 287 SMART SM01232 136 229 2.0E-28 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RM25_RS00645 26ed6d1c2b929163e093adb3e72ca8fc 287 SUPERFAMILY SSF57716 233 272 6.84E-10 T 22-04-2016 RM25_RS00645 26ed6d1c2b929163e093adb3e72ca8fc 287 SMART SM00898 2 122 4.7E-15 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RM25_RS00645 26ed6d1c2b929163e093adb3e72ca8fc 287 SUPERFAMILY SSF81624 2 145 1.57E-21 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RM25_RS00645 26ed6d1c2b929163e093adb3e72ca8fc 287 SUPERFAMILY SSF46946 136 219 2.75E-22 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RM25_RS00645 26ed6d1c2b929163e093adb3e72ca8fc 287 PANTHER PTHR22993 1 272 7.1E-109 T 22-04-2016 RM25_RS00645 26ed6d1c2b929163e093adb3e72ca8fc 287 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 99 7.9E-14 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RM25_RS00645 26ed6d1c2b929163e093adb3e72ca8fc 287 Gene3D G3DSA:1.10.8.50 137 272 2.2E-33 T 22-04-2016 RM25_RS00645 26ed6d1c2b929163e093adb3e72ca8fc 287 Pfam PF06827 Zinc finger found in FPG and IleRS 244 271 3.6E-9 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RM25_RS00645 26ed6d1c2b929163e093adb3e72ca8fc 287 Gene3D G3DSA:3.20.190.10 2 136 8.2E-18 T 22-04-2016 RM25_RS05735 fce0cddf93a811262b19250beadb31f0 315 PANTHER PTHR40446 120 314 3.2E-19 T 22-04-2016 RM25_RS05735 fce0cddf93a811262b19250beadb31f0 315 Pfam PF09992 Phosphodiester glycosidase 134 314 3.1E-34 T 22-04-2016 IPR018711 Phosphodiester glycosidase RM25_RS05735 fce0cddf93a811262b19250beadb31f0 315 PANTHER PTHR40446:SF1 120 314 3.2E-19 T 22-04-2016 RM25_RS07345 6d2cbd1986bd8b4a401633e3f34d5323 218 PANTHER PTHR15032:SF14 1 191 7.6E-27 T 22-04-2016 RM25_RS07345 6d2cbd1986bd8b4a401633e3f34d5323 218 PANTHER PTHR15032 1 191 7.6E-27 T 22-04-2016 RM25_RS07345 6d2cbd1986bd8b4a401633e3f34d5323 218 SUPERFAMILY SSF56281 1 187 2.09E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS07345 6d2cbd1986bd8b4a401633e3f34d5323 218 Pfam PF13483 Beta-lactamase superfamily domain 2 177 9.1E-21 T 22-04-2016 RM25_RS07345 6d2cbd1986bd8b4a401633e3f34d5323 218 SMART SM00849 7 177 1.1E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS07345 6d2cbd1986bd8b4a401633e3f34d5323 218 Gene3D G3DSA:3.60.15.10 1 200 4.1E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS06820 c82cfdb725bb6615eab61132bbb46588 146 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 115 19.707 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RM25_RS06820 c82cfdb725bb6615eab61132bbb46588 146 Pfam PF02033 Ribosome-binding factor A 5 108 5.4E-26 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RM25_RS06820 c82cfdb725bb6615eab61132bbb46588 146 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 95 8.0E-31 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RM25_RS06820 c82cfdb725bb6615eab61132bbb46588 146 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 110 4.4E-24 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RM25_RS06820 c82cfdb725bb6615eab61132bbb46588 146 ProSitePatterns PS01319 Ribosome-binding factor A signature. 74 95 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 RM25_RS06820 c82cfdb725bb6615eab61132bbb46588 146 PANTHER PTHR33515 1 144 1.3E-37 T 22-04-2016 RM25_RS06820 c82cfdb725bb6615eab61132bbb46588 146 Gene3D G3DSA:3.30.300.20 1 116 4.8E-36 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RM25_RS06820 c82cfdb725bb6615eab61132bbb46588 146 SUPERFAMILY SSF89919 2 111 5.49E-30 T 22-04-2016 IPR023799 Ribosome-binding factor A domain RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 SUPERFAMILY SSF57938 172 215 8.63E-8 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 SUPERFAMILY SSF49493 261 344 4.97E-17 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 Gene3D G3DSA:2.60.260.20 258 335 1.5E-17 T 22-04-2016 RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 SUPERFAMILY SSF46565 9 104 5.89E-27 T 22-04-2016 IPR001623 DnaJ domain RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 Pfam PF01556 DnaJ C terminal domain 159 334 5.7E-34 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 PANTHER PTHR24078 123 361 6.5E-94 T 22-04-2016 RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 PANTHER PTHR24078 8 98 6.5E-94 T 22-04-2016 RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 PRINTS PR00625 DnaJ domain signature 67 86 6.2E-19 T 22-04-2016 IPR001623 DnaJ domain RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 PRINTS PR00625 DnaJ domain signature 47 67 6.2E-19 T 22-04-2016 IPR001623 DnaJ domain RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 PRINTS PR00625 DnaJ domain signature 30 45 6.2E-19 T 22-04-2016 IPR001623 DnaJ domain RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 PRINTS PR00625 DnaJ domain signature 12 30 6.2E-19 T 22-04-2016 IPR001623 DnaJ domain RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 Gene3D G3DSA:2.60.260.20 149 256 3.5E-18 T 22-04-2016 RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 SMART SM00271 9 67 6.9E-28 T 22-04-2016 IPR001623 DnaJ domain RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 Pfam PF00226 DnaJ domain 10 72 6.7E-25 T 22-04-2016 IPR001623 DnaJ domain RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 7 365 27.962 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 Gene3D G3DSA:1.10.287.110 3 90 4.2E-28 T 22-04-2016 IPR001623 DnaJ domain RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 ProSitePatterns PS00636 Nt-dnaJ domain signature. 52 71 - T 22-04-2016 IPR018253 DnaJ domain, conserved site RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 PANTHER PTHR24078:SF190 123 361 6.5E-94 T 22-04-2016 RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 PANTHER PTHR24078:SF190 8 98 6.5E-94 T 22-04-2016 RM25_RS08330 0a6ad085230fc799eb411d8e1a0ae8d1 365 SUPERFAMILY SSF49493 151 268 6.15E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RM25_RS05145 450691bb8eb4b91e20d771885b83d3e9 366 Gene3D G3DSA:3.20.20.70 13 356 4.8E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS05145 450691bb8eb4b91e20d771885b83d3e9 366 PANTHER PTHR11938 55 356 1.7E-66 T 22-04-2016 RM25_RS05145 450691bb8eb4b91e20d771885b83d3e9 366 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 15 358 41.802 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS05145 450691bb8eb4b91e20d771885b83d3e9 366 Pfam PF01180 Dihydroorotate dehydrogenase 64 355 1.8E-79 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RM25_RS05145 450691bb8eb4b91e20d771885b83d3e9 366 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 18 356 4.0E-99 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RM25_RS05145 450691bb8eb4b91e20d771885b83d3e9 366 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 97 116 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 RM25_RS05145 450691bb8eb4b91e20d771885b83d3e9 366 SUPERFAMILY SSF51395 26 356 7.33E-84 T 22-04-2016 RM25_RS05145 450691bb8eb4b91e20d771885b83d3e9 366 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 314 334 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 RM25_RS06135 750e3507eef6232ef5e8ac8d39e48f81 240 PANTHER PTHR30028 2 240 3.2E-18 T 22-04-2016 RM25_RS06135 750e3507eef6232ef5e8ac8d39e48f81 240 PANTHER PTHR30028:SF0 2 240 3.2E-18 T 22-04-2016 IPR005226 UPF0014 family RM25_RS06135 750e3507eef6232ef5e8ac8d39e48f81 240 Pfam PF03649 Uncharacterised protein family (UPF0014) 2 227 2.2E-42 T 22-04-2016 IPR005226 UPF0014 family RM25_RS02035 89de1ca47acf29ec71cf0ca60a24c097 203 Gene3D G3DSA:3.40.50.720 1 201 6.9E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS02035 89de1ca47acf29ec71cf0ca60a24c097 203 Pfam PF13460 NAD(P)H-binding 7 190 8.5E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS02035 89de1ca47acf29ec71cf0ca60a24c097 203 PANTHER PTHR15020:SF29 1 203 4.9E-40 T 22-04-2016 RM25_RS02035 89de1ca47acf29ec71cf0ca60a24c097 203 PANTHER PTHR15020 1 203 4.9E-40 T 22-04-2016 RM25_RS02035 89de1ca47acf29ec71cf0ca60a24c097 203 SUPERFAMILY SSF51735 1 201 3.1E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 Pfam PF02780 Transketolase, C-terminal domain 496 613 1.6E-21 T 22-04-2016 IPR033248 Transketolase, C-terminal domain RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 Gene3D G3DSA:3.40.50.920 491 617 4.9E-25 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 Gene3D G3DSA:3.40.50.970 332 480 7.1E-28 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 ProSitePatterns PS00802 Transketolase signature 2. 424 440 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 SUPERFAMILY SSF52518 20 196 1.97E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 SUPERFAMILY SSF52518 241 365 1.97E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 Pfam PF02779 Transketolase, pyrimidine binding domain 318 481 1.6E-33 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 SUPERFAMILY SSF52518 317 481 4.66E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 7 616 2.2E-175 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 SUPERFAMILY SSF52922 491 617 7.2E-23 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 ProSitePatterns PS00801 Transketolase signature 1. 29 48 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 4 281 2.7E-104 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 Gene3D G3DSA:3.40.50.970 241 331 3.3E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 Gene3D G3DSA:3.40.50.970 18 196 3.3E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 PANTHER PTHR11624:SF20 240 617 8.6E-234 T 22-04-2016 RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 PANTHER PTHR11624:SF20 17 213 8.6E-234 T 22-04-2016 RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 SMART SM00861 318 482 1.2E-48 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 3 618 38.877 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 PANTHER PTHR11624 240 617 8.6E-234 T 22-04-2016 IPR033247 Transketolase family RM25_RS04590 0727b5b6380ecf114bf3b71cfb4107f6 618 PANTHER PTHR11624 17 213 8.6E-234 T 22-04-2016 IPR033247 Transketolase family RM25_RS00630 9e4c75195c858ea16276bf143eb0ac87 202 Pfam PF06737 Transglycosylase-like domain 31 106 4.3E-34 T 22-04-2016 IPR010618 Transglycosylase-like RM25_RS00630 9e4c75195c858ea16276bf143eb0ac87 202 SUPERFAMILY SSF54106 158 202 2.62E-9 T 22-04-2016 IPR018392 LysM domain RM25_RS00630 9e4c75195c858ea16276bf143eb0ac87 202 Gene3D G3DSA:3.10.350.10 158 202 2.7E-14 T 22-04-2016 IPR018392 LysM domain RM25_RS00630 9e4c75195c858ea16276bf143eb0ac87 202 Pfam PF01476 LysM domain 158 202 6.7E-12 T 22-04-2016 IPR018392 LysM domain RM25_RS00630 9e4c75195c858ea16276bf143eb0ac87 202 SMART SM00257 157 202 9.3E-9 T 22-04-2016 IPR018392 LysM domain RM25_RS00630 9e4c75195c858ea16276bf143eb0ac87 202 SUPERFAMILY SSF53955 30 111 8.7E-32 T 22-04-2016 IPR023346 Lysozyme-like domain RM25_RS00630 9e4c75195c858ea16276bf143eb0ac87 202 Gene3D G3DSA:1.10.530.10 12 111 2.6E-40 T 22-04-2016 RM25_RS04885 eadf380f72937f309734f5417881982f 351 SUPERFAMILY SSF159659 14 273 9.42E-66 T 22-04-2016 RM25_RS04885 eadf380f72937f309734f5417881982f 351 PIRSF PIRSF028754 12 310 4.9E-69 T 22-04-2016 IPR008492 Protein of unknown function DUF774 RM25_RS04885 eadf380f72937f309734f5417881982f 351 Pfam PF09754 PAC2 family 38 249 1.1E-30 T 22-04-2016 IPR019151 Proteasome assembly chaperone 2 RM25_RS04885 eadf380f72937f309734f5417881982f 351 PANTHER PTHR42301 4 310 4.2E-68 T 22-04-2016 RM25_RS04885 eadf380f72937f309734f5417881982f 351 Gene3D G3DSA:1.10.287.100 231 272 7.2E-15 T 22-04-2016 IPR013028 Transcription factor IIA, alpha subunit, N-terminal GO:0006367 RM25_RS04885 eadf380f72937f309734f5417881982f 351 PANTHER PTHR42301:SF1 4 310 4.2E-68 T 22-04-2016 RM25_RS02485 bff684077eede2f3de97ff05389a680a 144 Gene3D G3DSA:3.10.129.10 2 137 2.8E-25 T 22-04-2016 IPR029069 HotDog domain RM25_RS02485 bff684077eede2f3de97ff05389a680a 144 Pfam PF13452 N-terminal half of MaoC dehydratase 7 131 1.2E-21 T 22-04-2016 RM25_RS02485 bff684077eede2f3de97ff05389a680a 144 SUPERFAMILY SSF54637 8 137 4.01E-24 T 22-04-2016 IPR029069 HotDog domain RM25_RS02485 bff684077eede2f3de97ff05389a680a 144 PIRSF PIRSF018072 2 144 8.8E-35 T 22-04-2016 IPR016709 Uncharacterised protein family UPF0336 RM25_RS01795 168df097cb99ba41462f7dc8304ced33 481 PIRSF PIRSF006060 2 479 8.8E-59 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS01795 168df097cb99ba41462f7dc8304ced33 481 Pfam PF13520 Amino acid permease 13 419 1.8E-42 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS01795 168df097cb99ba41462f7dc8304ced33 481 PANTHER PTHR11785 2 434 2.2E-36 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS06985 3789283eb31036d86dcdff993a2df1a3 115 SUPERFAMILY SSF50022 5 111 3.93E-24 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RM25_RS06985 3789283eb31036d86dcdff993a2df1a3 115 PANTHER PTHR21496:SF11 11 110 1.6E-16 T 22-04-2016 RM25_RS06985 3789283eb31036d86dcdff993a2df1a3 115 Gene3D G3DSA:2.102.10.10 3 112 1.2E-26 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RM25_RS06985 3789283eb31036d86dcdff993a2df1a3 115 Pfam PF00355 Rieske [2Fe-2S] domain 6 96 1.1E-13 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RM25_RS06985 3789283eb31036d86dcdff993a2df1a3 115 PANTHER PTHR21496 11 110 1.6E-16 T 22-04-2016 RM25_RS06955 979343fcf93c9d17b0c08db9f520467c 277 Gene3D G3DSA:3.40.50.150 98 227 1.1E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS06955 979343fcf93c9d17b0c08db9f520467c 277 PANTHER PTHR10108:SF886 33 192 5.1E-16 T 22-04-2016 RM25_RS06955 979343fcf93c9d17b0c08db9f520467c 277 PIRSF PIRSF018249 5 274 1.1E-67 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 RM25_RS06955 979343fcf93c9d17b0c08db9f520467c 277 SUPERFAMILY SSF53335 16 213 6.82E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS06955 979343fcf93c9d17b0c08db9f520467c 277 Pfam PF08241 Methyltransferase domain 100 184 2.5E-5 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RM25_RS06955 979343fcf93c9d17b0c08db9f520467c 277 PANTHER PTHR10108 33 192 5.1E-16 T 22-04-2016 RM25_RS11995 93fccfa4c512877b01bb8c958cfe13ff 596 SMART SM00220 125 388 5.5E-58 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RM25_RS11995 93fccfa4c512877b01bb8c958cfe13ff 596 Pfam PF00069 Protein kinase domain 125 381 5.0E-48 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RM25_RS11995 93fccfa4c512877b01bb8c958cfe13ff 596 PANTHER PTHR24362:SF160 116 563 1.3E-86 T 22-04-2016 RM25_RS11995 93fccfa4c512877b01bb8c958cfe13ff 596 Gene3D G3DSA:1.10.510.10 192 386 1.4E-46 T 22-04-2016 RM25_RS11995 93fccfa4c512877b01bb8c958cfe13ff 596 Gene3D G3DSA:3.30.200.20 117 191 7.8E-24 T 22-04-2016 RM25_RS11995 93fccfa4c512877b01bb8c958cfe13ff 596 PANTHER PTHR24362 116 563 1.3E-86 T 22-04-2016 RM25_RS11995 93fccfa4c512877b01bb8c958cfe13ff 596 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 244 256 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RM25_RS11995 93fccfa4c512877b01bb8c958cfe13ff 596 SUPERFAMILY SSF56112 513 568 4.24E-71 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS11995 93fccfa4c512877b01bb8c958cfe13ff 596 SUPERFAMILY SSF56112 123 388 4.24E-71 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS06685 c720775671245010bef19c844f4b7d81 84 Hamap MF_00088 UPF0109 protein . 2 74 19.757 T 22-04-2016 IPR020627 Uncharacterised protein family UPF0109 RM25_RS06685 c720775671245010bef19c844f4b7d81 84 PANTHER PTHR34654 1 80 2.5E-22 T 22-04-2016 RM25_RS06685 c720775671245010bef19c844f4b7d81 84 Pfam PF13083 KH domain 4 71 5.7E-19 T 22-04-2016 RM25_RS06685 c720775671245010bef19c844f4b7d81 84 Gene3D G3DSA:3.30.300.120 7 66 6.8E-6 T 22-04-2016 RM25_RS06685 c720775671245010bef19c844f4b7d81 84 SUPERFAMILY SSF54814 16 60 4.97E-7 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RM25_RS02340 a39014cf3cc9df85640c9aecb9949409 185 Gene3D G3DSA:3.40.50.700 24 150 6.2E-31 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RM25_RS02340 a39014cf3cc9df85640c9aecb9949409 185 PANTHER PTHR11995 4 170 2.8E-71 T 22-04-2016 RM25_RS02340 a39014cf3cc9df85640c9aecb9949409 185 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 148 5.9E-63 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RM25_RS02340 a39014cf3cc9df85640c9aecb9949409 185 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RM25_RS02340 a39014cf3cc9df85640c9aecb9949409 185 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 39.346 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RM25_RS02340 a39014cf3cc9df85640c9aecb9949409 185 SUPERFAMILY SSF56770 9 148 2.88E-60 T 22-04-2016 RM25_RS02340 a39014cf3cc9df85640c9aecb9949409 185 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 145 1.5E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RM25_RS02340 a39014cf3cc9df85640c9aecb9949409 185 PANTHER PTHR11995:SF2 4 170 2.8E-71 T 22-04-2016 RM25_RS11235 f62dfe856c338a70a6f212fa787ecadd 105 Pfam PF01610 Transposase 3 89 2.3E-16 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS10910 edadcb04cbd83502a2b61bb1781de24d 336 PANTHER PTHR22604:SF103 3 335 9.3E-99 T 22-04-2016 RM25_RS10910 edadcb04cbd83502a2b61bb1781de24d 336 SUPERFAMILY SSF51735 3 150 5.64E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS10910 edadcb04cbd83502a2b61bb1781de24d 336 PANTHER PTHR22604 3 335 9.3E-99 T 22-04-2016 RM25_RS10910 edadcb04cbd83502a2b61bb1781de24d 336 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 122 5.2E-23 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RM25_RS10910 edadcb04cbd83502a2b61bb1781de24d 336 SUPERFAMILY SSF55347 132 280 1.64E-6 T 22-04-2016 RM25_RS10910 edadcb04cbd83502a2b61bb1781de24d 336 Gene3D G3DSA:3.30.360.10 150 259 3.2E-27 T 22-04-2016 RM25_RS10910 edadcb04cbd83502a2b61bb1781de24d 336 Gene3D G3DSA:3.40.50.720 2 149 5.0E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00420 f8f514ade50a030612efacae0aecc0ea 296 Gene3D G3DSA:3.20.20.80 1 48 3.9E-5 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RM25_RS10455 1398da5426780010a244e2553119d64e 108 PANTHER PTHR28082 23 105 1.3E-17 T 22-04-2016 RM25_RS10455 1398da5426780010a244e2553119d64e 108 PIRSF PIRSF017292 5 108 5.4E-29 T 22-04-2016 IPR016694 Protein of unknown function UCP017292, zinc finger, CHY-type RM25_RS10455 1398da5426780010a244e2553119d64e 108 Pfam PF05495 CHY zinc finger 21 95 1.7E-8 T 22-04-2016 IPR008913 Zinc finger, CHY-type GO:0008270 RM25_RS10455 1398da5426780010a244e2553119d64e 108 PANTHER PTHR28082:SF1 23 105 1.3E-17 T 22-04-2016 RM25_RS10455 1398da5426780010a244e2553119d64e 108 SUPERFAMILY SSF161219 11 93 5.89E-15 T 22-04-2016 RM25_RS10645 cb3ab69c5facde9268eed18f8ff0a1b4 385 Gene3D G3DSA:3.30.420.10 232 377 1.3E-10 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10645 cb3ab69c5facde9268eed18f8ff0a1b4 385 SUPERFAMILY SSF53098 231 379 2.73E-25 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10645 cb3ab69c5facde9268eed18f8ff0a1b4 385 ProSitePatterns PS01043 Transposases, IS30 family, signature. 325 341 - T 22-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 RM25_RS10645 cb3ab69c5facde9268eed18f8ff0a1b4 385 PANTHER PTHR10948 56 375 3.9E-85 T 22-04-2016 RM25_RS10645 cb3ab69c5facde9268eed18f8ff0a1b4 385 Pfam PF00665 Integrase core domain 231 338 4.3E-15 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS10645 cb3ab69c5facde9268eed18f8ff0a1b4 385 Pfam PF13936 Helix-turn-helix domain 64 103 4.3E-14 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RM25_RS11055 4a2a0edd4150bedd85daef1598fe964f 335 PANTHER PTHR30193:SF31 24 331 1.9E-106 T 22-04-2016 RM25_RS11055 4a2a0edd4150bedd85daef1598fe964f 335 Gene3D G3DSA:1.10.3720.10 46 325 4.5E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11055 4a2a0edd4150bedd85daef1598fe964f 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 333 1.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11055 4a2a0edd4150bedd85daef1598fe964f 335 SUPERFAMILY SSF161098 93 323 2.22E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11055 4a2a0edd4150bedd85daef1598fe964f 335 PANTHER PTHR30193 24 331 1.9E-106 T 22-04-2016 RM25_RS06990 8a91d1255b6750c561efde14aa61e80e 383 PANTHER PTHR30508:SF0 79 382 1.2E-78 T 22-04-2016 RM25_RS06990 8a91d1255b6750c561efde14aa61e80e 383 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 94 364 1.1E-72 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 RM25_RS06990 8a91d1255b6750c561efde14aa61e80e 383 Pfam PF01458 Uncharacterized protein family (UPF0051) 127 347 2.8E-64 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 RM25_RS06990 8a91d1255b6750c561efde14aa61e80e 383 PANTHER PTHR30508 79 382 1.2E-78 T 22-04-2016 RM25_RS06990 8a91d1255b6750c561efde14aa61e80e 383 SUPERFAMILY SSF101960 21 373 4.58E-82 T 22-04-2016 RM25_RS00635 392a3ab11120422c21a9c5d5c94c1bf8 685 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 137 149 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RM25_RS00635 392a3ab11120422c21a9c5d5c94c1bf8 685 PANTHER PTHR24362 14 473 3.5E-49 T 22-04-2016 RM25_RS00635 392a3ab11120422c21a9c5d5c94c1bf8 685 PANTHER PTHR24362:SF160 14 473 3.5E-49 T 22-04-2016 RM25_RS00635 392a3ab11120422c21a9c5d5c94c1bf8 685 SMART SM00220 19 280 3.1E-35 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RM25_RS00635 392a3ab11120422c21a9c5d5c94c1bf8 685 SUPERFAMILY SSF56112 17 273 1.89E-53 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS00635 392a3ab11120422c21a9c5d5c94c1bf8 685 Gene3D G3DSA:1.10.510.10 116 274 2.1E-40 T 22-04-2016 RM25_RS00635 392a3ab11120422c21a9c5d5c94c1bf8 685 Pfam PF00069 Protein kinase domain 19 268 2.4E-37 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RM25_RS00635 392a3ab11120422c21a9c5d5c94c1bf8 685 Gene3D G3DSA:3.30.200.20 5 115 4.3E-10 T 22-04-2016 RM25_RS07820 32cd97d8c1b0451b42de951a5bdf28af 412 SUPERFAMILY SSF103473 20 406 2.62E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS07820 32cd97d8c1b0451b42de951a5bdf28af 412 Gene3D G3DSA:1.20.1250.20 28 208 2.2E-20 T 22-04-2016 RM25_RS07820 32cd97d8c1b0451b42de951a5bdf28af 412 Gene3D G3DSA:1.20.1250.20 231 402 3.6E-6 T 22-04-2016 RM25_RS07820 32cd97d8c1b0451b42de951a5bdf28af 412 Pfam PF07690 Major Facilitator Superfamily 35 369 7.8E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS07820 32cd97d8c1b0451b42de951a5bdf28af 412 PANTHER PTHR23501 26 393 7.4E-80 T 22-04-2016 RM25_RS07820 32cd97d8c1b0451b42de951a5bdf28af 412 PANTHER PTHR23501:SF11 26 393 7.4E-80 T 22-04-2016 RM25_RS10835 f9ba952cfa49d5d9f002d62edd5506e1 258 Pfam PF08220 DeoR-like helix-turn-helix domain 12 63 1.6E-13 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RM25_RS10835 f9ba952cfa49d5d9f002d62edd5506e1 258 PANTHER PTHR30363 6 251 1.8E-49 T 22-04-2016 RM25_RS10835 f9ba952cfa49d5d9f002d62edd5506e1 258 SMART SM00420 12 64 3.4E-11 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RM25_RS10835 f9ba952cfa49d5d9f002d62edd5506e1 258 SUPERFAMILY SSF100950 82 239 5.44E-22 T 22-04-2016 RM25_RS10835 f9ba952cfa49d5d9f002d62edd5506e1 258 Gene3D G3DSA:3.40.50.1360 83 228 1.8E-6 T 22-04-2016 RM25_RS10835 f9ba952cfa49d5d9f002d62edd5506e1 258 SUPERFAMILY SSF46785 11 72 2.98E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10835 f9ba952cfa49d5d9f002d62edd5506e1 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 44 62 1.3E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RM25_RS10835 f9ba952cfa49d5d9f002d62edd5506e1 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 30 44 1.3E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RM25_RS10835 f9ba952cfa49d5d9f002d62edd5506e1 258 SMART SM01134 79 239 6.9E-50 T 22-04-2016 RM25_RS10835 f9ba952cfa49d5d9f002d62edd5506e1 258 Gene3D G3DSA:1.10.10.10 15 61 6.3E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10835 f9ba952cfa49d5d9f002d62edd5506e1 258 Pfam PF00455 DeoR C terminal sensor domain 82 237 1.8E-40 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain RM25_RS07490 61f380a7f6b11af8076dd73feed07944 988 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 111 325 2.3E-41 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RM25_RS07490 61f380a7f6b11af8076dd73feed07944 988 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 591 819 8.9E-40 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RM25_RS07490 61f380a7f6b11af8076dd73feed07944 988 SUPERFAMILY SSF81593 339 485 2.04E-36 T 22-04-2016 RM25_RS07490 61f380a7f6b11af8076dd73feed07944 988 SUPERFAMILY SSF81301 69 333 1.01E-55 T 22-04-2016 RM25_RS07490 61f380a7f6b11af8076dd73feed07944 988 SUPERFAMILY SSF81301 562 827 1.8E-53 T 22-04-2016 RM25_RS07490 61f380a7f6b11af8076dd73feed07944 988 Pfam PF08335 GlnD PII-uridylyltransferase 347 484 1.0E-32 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RM25_RS07490 61f380a7f6b11af8076dd73feed07944 988 Pfam PF08335 GlnD PII-uridylyltransferase 841 982 1.0E-22 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RM25_RS07490 61f380a7f6b11af8076dd73feed07944 988 SUPERFAMILY SSF81593 837 983 1.57E-31 T 22-04-2016 RM25_RS07490 61f380a7f6b11af8076dd73feed07944 988 PANTHER PTHR30621 1 988 4.1E-217 T 22-04-2016 RM25_RS07490 61f380a7f6b11af8076dd73feed07944 988 Gene3D G3DSA:3.30.460.10 673 826 3.0E-37 T 22-04-2016 RM25_RS07490 61f380a7f6b11af8076dd73feed07944 988 Gene3D G3DSA:3.30.460.10 174 334 1.1E-49 T 22-04-2016 RM25_RS00905 31ea379d6cd6728d0d259f9c27a7c547 199 SUPERFAMILY SSF46689 3 70 1.39E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS00905 31ea379d6cd6728d0d259f9c27a7c547 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 47 1.7E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS00905 31ea379d6cd6728d0d259f9c27a7c547 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 3 16 1.7E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS00905 31ea379d6cd6728d0d259f9c27a7c547 199 Gene3D G3DSA:1.10.357.10 3 176 2.1E-23 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS00905 31ea379d6cd6728d0d259f9c27a7c547 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 49 6.3E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS00905 31ea379d6cd6728d0d259f9c27a7c547 199 PANTHER PTHR30328 3 98 1.0E-17 T 22-04-2016 RM25_RS03010 c172f60b3471acf5b34860ff4d521364 332 SUPERFAMILY SSF81995 51 119 2.33E-5 T 22-04-2016 RM25_RS05250 6be59b6cd750ad6efd8aaa80f061ccb0 169 PANTHER PTHR40658 1 169 6.6E-31 T 22-04-2016 RM25_RS05250 6be59b6cd750ad6efd8aaa80f061ccb0 169 Pfam PF08020 Protein of unknown function (DUF1706) 1 165 3.8E-49 T 22-04-2016 IPR012550 Protein of unknown function DUF1706 RM25_RS11310 a0ace5f2c78a073a6697920f2e89bac4 553 PANTHER PTHR35004:SF2 4 453 4.9E-49 T 22-04-2016 RM25_RS11310 a0ace5f2c78a073a6697920f2e89bac4 553 PANTHER PTHR35004 4 453 4.9E-49 T 22-04-2016 RM25_RS10615 8c61b35d20143b56c2c62890b479ecdb 333 SUPERFAMILY SSF53098 137 148 4.68E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10615 8c61b35d20143b56c2c62890b479ecdb 333 SUPERFAMILY SSF53098 187 328 4.68E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10615 8c61b35d20143b56c2c62890b479ecdb 333 Pfam PF13011 leucine-zipper of insertion element IS481 2 78 2.5E-11 T 22-04-2016 IPR024967 DNA-binding domain, IS481-type RM25_RS10615 8c61b35d20143b56c2c62890b479ecdb 333 Gene3D G3DSA:3.30.420.10 190 321 2.9E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10615 8c61b35d20143b56c2c62890b479ecdb 333 Gene3D G3DSA:3.30.420.10 131 158 2.9E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10615 8c61b35d20143b56c2c62890b479ecdb 333 SUPERFAMILY SSF46689 4 107 3.31E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10615 8c61b35d20143b56c2c62890b479ecdb 333 Gene3D G3DSA:1.10.10.10 10 50 4.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10615 8c61b35d20143b56c2c62890b479ecdb 333 Pfam PF00665 Integrase core domain 136 284 1.9E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS10615 8c61b35d20143b56c2c62890b479ecdb 333 PANTHER PTHR24559 183 316 1.6E-16 T 22-04-2016 RM25_RS10615 8c61b35d20143b56c2c62890b479ecdb 333 PANTHER PTHR24559 125 149 1.6E-16 T 22-04-2016 RM25_RS01050 8bbc7bc1a0a98fb4554700a37cec4722 284 PRINTS PR00069 Aldo-keto reductase signature 95 113 1.3E-13 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS01050 8bbc7bc1a0a98fb4554700a37cec4722 284 PRINTS PR00069 Aldo-keto reductase signature 38 62 1.3E-13 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS01050 8bbc7bc1a0a98fb4554700a37cec4722 284 PRINTS PR00069 Aldo-keto reductase signature 206 230 1.3E-13 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS01050 8bbc7bc1a0a98fb4554700a37cec4722 284 Pfam PF00248 Aldo/keto reductase family 14 271 9.5E-55 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS01050 8bbc7bc1a0a98fb4554700a37cec4722 284 SUPERFAMILY SSF51430 4 277 6.02E-78 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS01050 8bbc7bc1a0a98fb4554700a37cec4722 284 Gene3D G3DSA:3.20.20.100 2 274 1.4E-78 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS01050 8bbc7bc1a0a98fb4554700a37cec4722 284 PANTHER PTHR11732 1 277 3.2E-107 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 68 92 1.5E-13 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 367 389 1.5E-13 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 94 114 1.5E-13 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 424 446 1.5E-13 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 92 117 1.2E-62 T 22-04-2016 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 120 140 1.2E-62 T 22-04-2016 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 167 188 1.2E-62 T 22-04-2016 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 425 444 1.2E-62 T 22-04-2016 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 322 334 1.2E-62 T 22-04-2016 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 254 280 1.2E-62 T 22-04-2016 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 232 253 1.2E-62 T 22-04-2016 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PANTHER PTHR22773:SF50 4 578 2.5E-197 T 22-04-2016 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 PANTHER PTHR22773 4 578 2.5E-197 T 22-04-2016 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 13 622 4.5E-192 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 Pfam PF00361 Proton-conducting membrane transporter 143 432 5.4E-77 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RM25_RS02390 1acf638701bc59ef91f7e77f1d8698ac 629 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 74 131 8.6E-23 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RM25_RS01115 1afdb05f280a81e8867260c01b91a36a 251 PANTHER PTHR21294:SF0 1 251 5.4E-36 T 22-04-2016 RM25_RS01115 1afdb05f280a81e8867260c01b91a36a 251 PANTHER PTHR21294 1 251 5.4E-36 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RM25_RS01115 1afdb05f280a81e8867260c01b91a36a 251 SMART SM00893 21 211 4.2E-25 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RM25_RS01115 1afdb05f280a81e8867260c01b91a36a 251 Pfam PF01012 Electron transfer flavoprotein domain 24 207 9.7E-30 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RM25_RS01115 1afdb05f280a81e8867260c01b91a36a 251 Gene3D G3DSA:3.40.50.620 1 249 1.5E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS01115 1afdb05f280a81e8867260c01b91a36a 251 SUPERFAMILY SSF52402 1 240 1.33E-42 T 22-04-2016 RM25_RS10525 aebf03c9e2676d2bfbefb52000457d5e 241 PANTHER PTHR31118 175 232 9.7E-23 T 22-04-2016 RM25_RS10525 aebf03c9e2676d2bfbefb52000457d5e 241 PANTHER PTHR31118 55 159 9.7E-23 T 22-04-2016 RM25_RS10525 aebf03c9e2676d2bfbefb52000457d5e 241 SUPERFAMILY SSF102198 11 232 8.37E-41 T 22-04-2016 RM25_RS10525 aebf03c9e2676d2bfbefb52000457d5e 241 Gene3D G3DSA:3.50.30.50 11 232 1.2E-44 T 22-04-2016 RM25_RS10525 aebf03c9e2676d2bfbefb52000457d5e 241 Pfam PF04199 Putative cyclase 13 159 3.6E-19 T 22-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RM25_RS11730 07b73fe5e7762ad052cdcf8a208ea6bf 288 Gene3D G3DSA:3.20.20.70 76 287 8.4E-39 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS11730 07b73fe5e7762ad052cdcf8a208ea6bf 288 SUPERFAMILY SSF51569 86 285 1.74E-15 T 22-04-2016 RM25_RS01510 dbc1c1dd1d7ed65cdab15905606746d8 206 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 2 200 1.2E-50 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS01510 dbc1c1dd1d7ed65cdab15905606746d8 206 PANTHER PTHR20857 1 203 6.4E-54 T 22-04-2016 RM25_RS01510 dbc1c1dd1d7ed65cdab15905606746d8 206 Pfam PF02581 Thiamine monophosphate synthase/TENI 3 187 2.3E-51 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS01510 dbc1c1dd1d7ed65cdab15905606746d8 206 Gene3D G3DSA:3.20.20.70 1 205 9.1E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS01510 dbc1c1dd1d7ed65cdab15905606746d8 206 PANTHER PTHR20857:SF15 1 203 6.4E-54 T 22-04-2016 RM25_RS01510 dbc1c1dd1d7ed65cdab15905606746d8 206 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 1 205 23.864 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS01510 dbc1c1dd1d7ed65cdab15905606746d8 206 SUPERFAMILY SSF51391 2 204 3.79E-53 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS06025 7e5fed6706b99300f5d0c2dcb5035b6f 463 PIRSF PIRSF006060 13 462 8.5E-71 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS06025 7e5fed6706b99300f5d0c2dcb5035b6f 463 Pfam PF13520 Amino acid permease 32 416 3.0E-37 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS06025 7e5fed6706b99300f5d0c2dcb5035b6f 463 PANTHER PTHR11785:SF346 23 452 1.2E-140 T 22-04-2016 RM25_RS06025 7e5fed6706b99300f5d0c2dcb5035b6f 463 PANTHER PTHR11785 23 452 1.2E-140 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS05520 aaea29f61fd4b899a05ce50bc95fc22f 191 SUPERFAMILY SSF69593 27 171 1.12E-12 T 22-04-2016 RM25_RS05520 aaea29f61fd4b899a05ce50bc95fc22f 191 PANTHER PTHR10434 5 159 3.7E-25 T 22-04-2016 RM25_RS05520 aaea29f61fd4b899a05ce50bc95fc22f 191 SMART SM00563 31 143 1.0E-12 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RM25_RS05520 aaea29f61fd4b899a05ce50bc95fc22f 191 PANTHER PTHR10434:SF9 5 159 3.7E-25 T 22-04-2016 RM25_RS10690 e22839b51df076642daaa54d98dcce3a 290 Pfam PF13276 HTH-like domain 45 100 7.1E-15 T 22-04-2016 IPR025948 HTH-like domain RM25_RS10690 e22839b51df076642daaa54d98dcce3a 290 Pfam PF00665 Integrase core domain 129 241 1.1E-21 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS10690 e22839b51df076642daaa54d98dcce3a 290 PANTHER PTHR32552 7 286 1.0E-46 T 22-04-2016 RM25_RS10690 e22839b51df076642daaa54d98dcce3a 290 Gene3D G3DSA:3.30.420.10 122 280 7.4E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10690 e22839b51df076642daaa54d98dcce3a 290 SUPERFAMILY SSF53098 122 288 2.43E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS09890 c6522d93792a1525769f611e7f52cc15 353 Pfam PF01882 Protein of unknown function DUF58 36 90 9.2E-18 T 22-04-2016 IPR002881 Domain of unknown function DUF58 RM25_RS09890 c6522d93792a1525769f611e7f52cc15 353 PANTHER PTHR33608 11 87 1.1E-16 T 22-04-2016 RM25_RS09890 c6522d93792a1525769f611e7f52cc15 353 PANTHER PTHR33608:SF1 11 87 1.1E-16 T 22-04-2016 RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 SMART SM00388 142 208 5.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 PANTHER PTHR24423 80 365 2.3E-77 T 22-04-2016 RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 SMART SM00387 253 365 1.6E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 PANTHER PTHR24423:SF394 80 365 2.3E-77 T 22-04-2016 RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 Gene3D G3DSA:3.30.565.10 195 365 1.7E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 365 7.9E-21 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 308 7.9E-21 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 322 7.9E-21 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 347 7.9E-21 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 SUPERFAMILY SSF55874 198 365 1.01E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 Pfam PF00512 His Kinase A (phospho-acceptor) domain 142 207 3.1E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 SUPERFAMILY SSF47384 128 208 8.24E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 Gene3D G3DSA:1.10.287.130 138 194 1.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS08810 4f11ea618ae0fad228961f9d2da3c852 365 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 365 5.6E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS07960 3c959774f33b75f2672df898ecc5ab52 167 SUPERFAMILY SSF54534 84 163 1.57E-13 T 22-04-2016 RM25_RS07960 3c959774f33b75f2672df898ecc5ab52 167 PIRSF PIRSF006092 1 165 6.6E-40 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RM25_RS07960 3c959774f33b75f2672df898ecc5ab52 167 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 163 2.3E-19 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RM25_RS07960 3c959774f33b75f2672df898ecc5ab52 167 Gene3D G3DSA:1.10.287.180 5 77 1.8E-28 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RM25_RS07960 3c959774f33b75f2672df898ecc5ab52 167 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 163 3.5E-44 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 RM25_RS07960 3c959774f33b75f2672df898ecc5ab52 167 SUPERFAMILY SSF46557 6 80 3.27E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RM25_RS07960 3c959774f33b75f2672df898ecc5ab52 167 Gene3D G3DSA:3.10.50.30 82 164 7.9E-20 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RM25_RS07960 3c959774f33b75f2672df898ecc5ab52 167 Pfam PF03449 Transcription elongation factor, N-terminal 7 77 3.2E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RM25_RS07960 3c959774f33b75f2672df898ecc5ab52 167 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RM25_RS07960 3c959774f33b75f2672df898ecc5ab52 167 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 127 143 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RM25_RS07960 3c959774f33b75f2672df898ecc5ab52 167 PANTHER PTHR30437 1 163 3.8E-41 T 22-04-2016 RM25_RS07960 3c959774f33b75f2672df898ecc5ab52 167 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 163 26.536 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RM25_RS09070 352ff1367fcc487dc4bd697032dc0d90 248 PANTHER PTHR34300 12 246 3.2E-29 T 22-04-2016 RM25_RS09070 352ff1367fcc487dc4bd697032dc0d90 248 Pfam PF02592 Putative vitamin uptake transporter 59 221 3.9E-35 T 22-04-2016 IPR003744 Protein of unknown function DUF165 RM25_RS09070 352ff1367fcc487dc4bd697032dc0d90 248 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 35 228 3.8E-20 T 22-04-2016 IPR003744 Protein of unknown function DUF165 RM25_RS04660 ef40b94bc3b91bbc3b57b5ffbe871de6 209 Pfam PF01066 CDP-alcohol phosphatidyltransferase 25 90 2.9E-11 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RM25_RS04660 ef40b94bc3b91bbc3b57b5ffbe871de6 209 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 90 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 176 193 7.8E-28 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 32 39 7.8E-28 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 76 84 7.8E-28 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 132 146 7.8E-28 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 45 66 7.8E-28 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 102 119 7.8E-28 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 PANTHER PTHR20857:SF19 15 279 1.1E-71 T 22-04-2016 RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 26 271 30.035 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 SUPERFAMILY SSF53613 23 271 2.0E-54 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 PIRSF PIRSF000513 19 279 3.3E-82 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 Gene3D G3DSA:3.40.1190.20 21 277 2.7E-81 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 Pfam PF02110 Hydroxyethylthiazole kinase family 24 267 3.9E-76 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS01515 52bad1dd4b378cca4aa21a56e3be202e 281 PANTHER PTHR20857 15 279 1.1E-71 T 22-04-2016 RM25_RS03715 2b1b323a2fbc27c2a979f4439034d99a 547 Gene3D G3DSA:3.40.50.300 58 247 7.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03715 2b1b323a2fbc27c2a979f4439034d99a 547 Pfam PF01926 50S ribosome-binding GTPase 60 171 6.1E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RM25_RS03715 2b1b323a2fbc27c2a979f4439034d99a 547 SUPERFAMILY SSF52540 54 246 3.57E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08855 bf2a344eec7bd8d792ee9c2d73a2a1ef 441 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 429 94.76 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 RM25_RS08855 bf2a344eec7bd8d792ee9c2d73a2a1ef 441 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 275 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS08855 bf2a344eec7bd8d792ee9c2d73a2a1ef 441 SUPERFAMILY SSF53383 2 425 2.23E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS08855 bf2a344eec7bd8d792ee9c2d73a2a1ef 441 Gene3D G3DSA:3.40.640.10 70 321 4.0E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS08855 bf2a344eec7bd8d792ee9c2d73a2a1ef 441 Pfam PF00202 Aminotransferase class-III 32 402 1.4E-73 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS08855 bf2a344eec7bd8d792ee9c2d73a2a1ef 441 Gene3D G3DSA:3.90.1150.10 323 421 3.2E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS08855 bf2a344eec7bd8d792ee9c2d73a2a1ef 441 Gene3D G3DSA:3.90.1150.10 3 69 3.2E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS08855 bf2a344eec7bd8d792ee9c2d73a2a1ef 441 PANTHER PTHR11986:SF5 1 441 2.0E-172 T 22-04-2016 RM25_RS08855 bf2a344eec7bd8d792ee9c2d73a2a1ef 441 PANTHER PTHR11986 1 441 2.0E-172 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RM25_RS02410 1373a46ce02e887121d72b5042e85e85 151 PANTHER PTHR34980 1 138 3.3E-24 T 22-04-2016 RM25_RS02410 1373a46ce02e887121d72b5042e85e85 151 Pfam PF05656 Protein of unknown function (DUF805) 14 132 1.8E-27 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 RM25_RS06635 61f0cc1ba20a669bf908b00c1ddb93cc 104 Pfam PF10611 Protein of unknown function (DUF2469) 3 101 1.4E-48 T 22-04-2016 IPR019592 Protein of unknown function DUF2469 RM25_RS00970 2fcdee7f2a0709cd4d4a97bc14ab9254 577 Gene3D G3DSA:3.40.50.300 335 564 2.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00970 2fcdee7f2a0709cd4d4a97bc14ab9254 577 Gene3D G3DSA:1.20.1560.10 6 312 2.6E-59 T 22-04-2016 RM25_RS00970 2fcdee7f2a0709cd4d4a97bc14ab9254 577 SUPERFAMILY SSF52540 328 571 2.49E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00970 2fcdee7f2a0709cd4d4a97bc14ab9254 577 SMART SM00382 360 546 1.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS00970 2fcdee7f2a0709cd4d4a97bc14ab9254 577 PANTHER PTHR24221:SF190 3 577 1.8E-214 T 22-04-2016 RM25_RS00970 2fcdee7f2a0709cd4d4a97bc14ab9254 577 SUPERFAMILY SSF90123 6 312 7.32E-65 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS00970 2fcdee7f2a0709cd4d4a97bc14ab9254 577 Pfam PF00664 ABC transporter transmembrane region 19 288 7.1E-42 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS00970 2fcdee7f2a0709cd4d4a97bc14ab9254 577 PANTHER PTHR24221 3 577 1.8E-214 T 22-04-2016 RM25_RS00970 2fcdee7f2a0709cd4d4a97bc14ab9254 577 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS00970 2fcdee7f2a0709cd4d4a97bc14ab9254 577 Pfam PF00005 ABC transporter 351 499 1.6E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS00980 40b2da7a79c5ba3cd86c80d8766a58a5 296 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 22 282 7.0E-71 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 RM25_RS00980 40b2da7a79c5ba3cd86c80d8766a58a5 296 SUPERFAMILY SSF51717 11 285 6.67E-67 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RM25_RS00980 40b2da7a79c5ba3cd86c80d8766a58a5 296 Pfam PF00809 Pterin binding enzyme 23 268 2.8E-50 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RM25_RS00980 40b2da7a79c5ba3cd86c80d8766a58a5 296 PANTHER PTHR20941 8 288 5.3E-89 T 22-04-2016 RM25_RS00980 40b2da7a79c5ba3cd86c80d8766a58a5 296 Gene3D G3DSA:3.20.20.20 19 285 4.5E-73 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RM25_RS00980 40b2da7a79c5ba3cd86c80d8766a58a5 296 PANTHER PTHR20941:SF8 8 288 5.3E-89 T 22-04-2016 RM25_RS09705 82253c5bca3dba75f1db25121f231489 163 Gene3D G3DSA:1.10.3480.10 7 163 4.3E-60 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RM25_RS09705 82253c5bca3dba75f1db25121f231489 163 PANTHER PTHR34227 1 158 4.3E-13 T 22-04-2016 RM25_RS09705 82253c5bca3dba75f1db25121f231489 163 Pfam PF02613 Nitrate reductase delta subunit 10 125 2.7E-22 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RM25_RS09705 82253c5bca3dba75f1db25121f231489 163 SUPERFAMILY SSF89155 9 158 4.97E-32 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RM25_RS10985 9865b1be9f2694ed37dd36aa1acc5a42 422 Pfam PF07690 Major Facilitator Superfamily 16 357 3.0E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS10985 9865b1be9f2694ed37dd36aa1acc5a42 422 Gene3D G3DSA:1.20.1250.20 12 187 3.2E-13 T 22-04-2016 RM25_RS10985 9865b1be9f2694ed37dd36aa1acc5a42 422 Gene3D G3DSA:1.20.1250.20 225 400 4.6E-13 T 22-04-2016 RM25_RS10985 9865b1be9f2694ed37dd36aa1acc5a42 422 PANTHER PTHR23513 1 405 1.1E-28 T 22-04-2016 RM25_RS10985 9865b1be9f2694ed37dd36aa1acc5a42 422 SUPERFAMILY SSF103473 6 399 3.4E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS11075 c76defc1bfbafeff6784a8a0852f9ab2 150 PANTHER PTHR21368 1 147 1.7E-37 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11075 c76defc1bfbafeff6784a8a0852f9ab2 150 Gene3D G3DSA:3.40.5.10 1 51 8.2E-21 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal RM25_RS11075 c76defc1bfbafeff6784a8a0852f9ab2 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 2.0E-22 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal RM25_RS11075 c76defc1bfbafeff6784a8a0852f9ab2 150 SUPERFAMILY SSF55658 1 56 2.79E-16 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RM25_RS11075 c76defc1bfbafeff6784a8a0852f9ab2 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal RM25_RS11075 c76defc1bfbafeff6784a8a0852f9ab2 150 SUPERFAMILY SSF55653 57 147 5.23E-21 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal RM25_RS11075 c76defc1bfbafeff6784a8a0852f9ab2 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 1.2E-32 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11075 c76defc1bfbafeff6784a8a0852f9ab2 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 22.725 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS11075 c76defc1bfbafeff6784a8a0852f9ab2 150 Gene3D G3DSA:3.10.430.100 62 147 2.4E-24 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal RM25_RS11075 c76defc1bfbafeff6784a8a0852f9ab2 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 6.0E-19 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal RM25_RS01210 66694524bdae997219aa8e2b9c83ef80 324 PANTHER PTHR10366 2 323 2.5E-95 T 22-04-2016 RM25_RS01210 66694524bdae997219aa8e2b9c83ef80 324 Gene3D G3DSA:3.40.50.720 1 171 1.4E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01210 66694524bdae997219aa8e2b9c83ef80 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 250 2.9E-50 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RM25_RS01210 66694524bdae997219aa8e2b9c83ef80 324 SUPERFAMILY SSF51735 1 321 4.09E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS01210 66694524bdae997219aa8e2b9c83ef80 324 Gene3D G3DSA:3.90.25.10 172 219 5.5E-35 T 22-04-2016 RM25_RS01210 66694524bdae997219aa8e2b9c83ef80 324 Gene3D G3DSA:3.90.25.10 252 323 5.5E-35 T 22-04-2016 RM25_RS01210 66694524bdae997219aa8e2b9c83ef80 324 PANTHER PTHR10366:SF39 2 323 2.5E-95 T 22-04-2016 RM25_RS01210 66694524bdae997219aa8e2b9c83ef80 324 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 322 5.9E-98 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 RM25_RS09095 edc967fa57be67262453906869443342 279 PANTHER PTHR32552 1 266 1.5E-55 T 22-04-2016 RM25_RS09095 edc967fa57be67262453906869443342 279 Pfam PF13276 HTH-like domain 21 77 3.8E-11 T 22-04-2016 IPR025948 HTH-like domain RM25_RS09095 edc967fa57be67262453906869443342 279 Gene3D G3DSA:3.30.420.10 95 259 3.4E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS09095 edc967fa57be67262453906869443342 279 SUPERFAMILY SSF53098 95 262 8.8E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS09095 edc967fa57be67262453906869443342 279 Pfam PF00665 Integrase core domain 101 216 2.1E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS10195 edc967fa57be67262453906869443342 279 PANTHER PTHR32552 1 266 1.5E-55 T 22-04-2016 RM25_RS10195 edc967fa57be67262453906869443342 279 Pfam PF13276 HTH-like domain 21 77 3.8E-11 T 22-04-2016 IPR025948 HTH-like domain RM25_RS10195 edc967fa57be67262453906869443342 279 Gene3D G3DSA:3.30.420.10 95 259 3.4E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10195 edc967fa57be67262453906869443342 279 SUPERFAMILY SSF53098 95 262 8.8E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS10195 edc967fa57be67262453906869443342 279 Pfam PF00665 Integrase core domain 101 216 2.1E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS01240 8745947c7cf011762dd5cb0c86adcd6c 472 PANTHER PTHR11662 24 455 2.6E-162 T 22-04-2016 RM25_RS01240 8745947c7cf011762dd5cb0c86adcd6c 472 Gene3D G3DSA:1.20.1250.20 260 455 1.3E-40 T 22-04-2016 RM25_RS01240 8745947c7cf011762dd5cb0c86adcd6c 472 Gene3D G3DSA:1.20.1250.20 32 226 3.2E-46 T 22-04-2016 RM25_RS01240 8745947c7cf011762dd5cb0c86adcd6c 472 SUPERFAMILY SSF103473 21 455 9.68E-81 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS01240 8745947c7cf011762dd5cb0c86adcd6c 472 PIRSF PIRSF002808 17 466 8.6E-130 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RM25_RS01240 8745947c7cf011762dd5cb0c86adcd6c 472 PANTHER PTHR11662:SF141 24 455 2.6E-162 T 22-04-2016 RM25_RS01240 8745947c7cf011762dd5cb0c86adcd6c 472 ProSitePatterns PS00942 glpT family of transporters signature. 165 181 - T 22-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 RM25_RS01240 8745947c7cf011762dd5cb0c86adcd6c 472 Pfam PF07690 Major Facilitator Superfamily 45 415 2.7E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS09340 9bf82deb1962fbe89b2402bb53b7300f 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 138 212 9.3E-29 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS09340 9bf82deb1962fbe89b2402bb53b7300f 219 Gene3D G3DSA:1.10.10.10 117 215 1.6E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS09340 9bf82deb1962fbe89b2402bb53b7300f 219 SMART SM00862 138 212 1.0E-29 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RM25_RS09340 9bf82deb1962fbe89b2402bb53b7300f 219 SUPERFAMILY SSF46894 116 213 1.45E-30 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RM25_RS09340 9bf82deb1962fbe89b2402bb53b7300f 219 PANTHER PTHR26402:SF506 44 212 6.5E-36 T 22-04-2016 RM25_RS09340 9bf82deb1962fbe89b2402bb53b7300f 219 PANTHER PTHR26402 44 212 6.5E-36 T 22-04-2016 RM25_RS05280 4346abcc54c0bd8600404a6334c2978c 101 Gene3D G3DSA:1.10.10.10 4 97 4.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS05280 4346abcc54c0bd8600404a6334c2978c 101 SUPERFAMILY SSF46785 7 96 8.97E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS05280 4346abcc54c0bd8600404a6334c2978c 101 Pfam PF13601 Winged helix DNA-binding domain 14 97 2.6E-16 T 22-04-2016 IPR027395 Winged helix DNA-binding domain RM25_RS05280 4346abcc54c0bd8600404a6334c2978c 101 SMART SM00418 5 99 0.0019 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS03915 cb8077e453613f5fda40283242cbaa64 131 PRINTS PR01243 Nucleoside diphosphate kinase signature 64 81 1.8E-28 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS03915 cb8077e453613f5fda40283242cbaa64 131 PRINTS PR01243 Nucleoside diphosphate kinase signature 85 101 1.8E-28 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS03915 cb8077e453613f5fda40283242cbaa64 131 PRINTS PR01243 Nucleoside diphosphate kinase signature 44 63 1.8E-28 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS03915 cb8077e453613f5fda40283242cbaa64 131 PRINTS PR01243 Nucleoside diphosphate kinase signature 108 127 1.8E-28 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS03915 cb8077e453613f5fda40283242cbaa64 131 Gene3D G3DSA:3.30.70.141 1 129 7.9E-50 T 22-04-2016 RM25_RS03915 cb8077e453613f5fda40283242cbaa64 131 PANTHER PTHR11349 1 130 4.9E-59 T 22-04-2016 RM25_RS03915 cb8077e453613f5fda40283242cbaa64 131 Pfam PF00334 Nucleoside diphosphate kinase 1 129 3.9E-48 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS03915 cb8077e453613f5fda40283242cbaa64 131 SMART SM00562 1 130 1.8E-56 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS03915 cb8077e453613f5fda40283242cbaa64 131 SUPERFAMILY SSF54919 1 129 1.57E-48 T 22-04-2016 RM25_RS03915 cb8077e453613f5fda40283242cbaa64 131 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 108 116 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS03415 139056f7a307566ec276a4cb6cc68fae 310 PANTHER PTHR33392:SF6 42 293 5.7E-71 T 22-04-2016 RM25_RS03415 139056f7a307566ec276a4cb6cc68fae 310 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 70 213 3.6E-39 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain RM25_RS03415 139056f7a307566ec276a4cb6cc68fae 310 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 70 213 1.1E-43 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain RM25_RS03415 139056f7a307566ec276a4cb6cc68fae 310 PANTHER PTHR33392 42 293 5.7E-71 T 22-04-2016 RM25_RS11430 aff97f13d5a6fdf3bb9b1f1f8a29d28a 305 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 12 294 3.0E-49 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- RM25_RS11430 aff97f13d5a6fdf3bb9b1f1f8a29d28a 305 SUPERFAMILY SSF54909 9 298 1.34E-66 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RM25_RS11430 aff97f13d5a6fdf3bb9b1f1f8a29d28a 305 Pfam PF04261 Dyp-type peroxidase family 58 294 3.3E-46 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- RM25_RS11430 aff97f13d5a6fdf3bb9b1f1f8a29d28a 305 PANTHER PTHR30521:SF0 57 305 9.7E-49 T 22-04-2016 RM25_RS11430 aff97f13d5a6fdf3bb9b1f1f8a29d28a 305 PANTHER PTHR30521 57 305 9.7E-49 T 22-04-2016 RM25_RS05795 69cd0dfa8db16582ce5b4efe0536a9e5 406 PANTHER PTHR11851 3 404 5.3E-107 T 22-04-2016 RM25_RS05795 69cd0dfa8db16582ce5b4efe0536a9e5 406 Pfam PF05193 Peptidase M16 inactive domain 159 332 2.3E-24 T 22-04-2016 IPR007863 Peptidase M16, C-terminal RM25_RS05795 69cd0dfa8db16582ce5b4efe0536a9e5 406 Pfam PF00675 Insulinase (Peptidase family M16) 3 117 8.4E-19 T 22-04-2016 IPR011765 Peptidase M16, N-terminal RM25_RS05795 69cd0dfa8db16582ce5b4efe0536a9e5 406 Gene3D G3DSA:3.30.830.10 226 399 1.2E-16 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RM25_RS05795 69cd0dfa8db16582ce5b4efe0536a9e5 406 SUPERFAMILY SSF63411 2 197 1.57E-48 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RM25_RS05795 69cd0dfa8db16582ce5b4efe0536a9e5 406 SUPERFAMILY SSF63411 223 401 1.5E-26 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RM25_RS05795 69cd0dfa8db16582ce5b4efe0536a9e5 406 Gene3D G3DSA:3.30.830.10 1 207 4.1E-43 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RM25_RS05795 69cd0dfa8db16582ce5b4efe0536a9e5 406 PANTHER PTHR11851:SF136 3 404 5.3E-107 T 22-04-2016 RM25_RS01775 0d90f8d6e89858ad617f4e3a49d38d7c 647 Pfam PF03023 MviN-like protein 136 587 1.2E-64 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RM25_RS01775 0d90f8d6e89858ad617f4e3a49d38d7c 647 PRINTS PR01806 Virulence factor MviN signature 260 281 9.7E-14 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RM25_RS01775 0d90f8d6e89858ad617f4e3a49d38d7c 647 PRINTS PR01806 Virulence factor MviN signature 141 160 9.7E-14 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RM25_RS01775 0d90f8d6e89858ad617f4e3a49d38d7c 647 PRINTS PR01806 Virulence factor MviN signature 236 260 9.7E-14 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RM25_RS01775 0d90f8d6e89858ad617f4e3a49d38d7c 647 PRINTS PR01806 Virulence factor MviN signature 380 406 9.7E-14 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RM25_RS01450 97d9823c8dd6454921f8d51deeb3745e 330 Pfam PF00294 pfkB family carbohydrate kinase 32 318 1.6E-55 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RM25_RS01450 97d9823c8dd6454921f8d51deeb3745e 330 Gene3D G3DSA:3.40.1190.20 31 328 2.7E-81 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS01450 97d9823c8dd6454921f8d51deeb3745e 330 PANTHER PTHR10584:SF184 13 330 1.9E-73 T 22-04-2016 RM25_RS01450 97d9823c8dd6454921f8d51deeb3745e 330 PRINTS PR00990 Ribokinase signature 132 145 1.1E-27 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RM25_RS01450 97d9823c8dd6454921f8d51deeb3745e 330 PRINTS PR00990 Ribokinase signature 242 253 1.1E-27 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RM25_RS01450 97d9823c8dd6454921f8d51deeb3745e 330 PRINTS PR00990 Ribokinase signature 34 55 1.1E-27 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RM25_RS01450 97d9823c8dd6454921f8d51deeb3745e 330 PRINTS PR00990 Ribokinase signature 200 215 1.1E-27 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RM25_RS01450 97d9823c8dd6454921f8d51deeb3745e 330 PRINTS PR00990 Ribokinase signature 61 80 1.1E-27 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RM25_RS01450 97d9823c8dd6454921f8d51deeb3745e 330 SUPERFAMILY SSF53613 31 327 8.57E-68 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS01450 97d9823c8dd6454921f8d51deeb3745e 330 PANTHER PTHR10584 13 330 1.9E-73 T 22-04-2016 RM25_RS01300 02a1583fae544346bb73fbc26151e0f1 175 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 148 166 3.6E-10 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RM25_RS01300 02a1583fae544346bb73fbc26151e0f1 175 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 53 69 3.6E-10 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RM25_RS01300 02a1583fae544346bb73fbc26151e0f1 175 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 77 93 3.6E-10 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RM25_RS01300 02a1583fae544346bb73fbc26151e0f1 175 PANTHER PTHR30295:SF10 6 168 1.1E-29 T 22-04-2016 RM25_RS01300 02a1583fae544346bb73fbc26151e0f1 175 PANTHER PTHR30295 6 168 1.1E-29 T 22-04-2016 RM25_RS01300 02a1583fae544346bb73fbc26151e0f1 175 SUPERFAMILY SSF47240 28 168 6.76E-41 T 22-04-2016 IPR009078 Ferritin-like superfamily RM25_RS01300 02a1583fae544346bb73fbc26151e0f1 175 Gene3D G3DSA:1.20.1260.10 31 169 1.4E-40 T 22-04-2016 IPR012347 Ferritin-related RM25_RS01300 02a1583fae544346bb73fbc26151e0f1 175 Pfam PF00210 Ferritin-like domain 34 168 1.0E-19 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RM25_RS01300 02a1583fae544346bb73fbc26151e0f1 175 ProSitePatterns PS00818 Dps protein family signature 1. 53 69 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RM25_RS01300 02a1583fae544346bb73fbc26151e0f1 175 PIRSF PIRSF005900 12 175 9.7E-36 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RM25_RS02670 7616733110c93bb874e605b7a78f39d3 220 PIRSF PIRSF002161 20 207 7.7E-62 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 RM25_RS02670 7616733110c93bb874e605b7a78f39d3 220 Gene3D G3DSA:3.30.1440.10 23 200 4.5E-74 T 22-04-2016 IPR022803 Ribosomal protein L5 domain RM25_RS02670 7616733110c93bb874e605b7a78f39d3 220 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 23 201 41.76 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02670 7616733110c93bb874e605b7a78f39d3 220 Pfam PF00281 Ribosomal protein L5 46 102 6.0E-26 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal RM25_RS02670 7616733110c93bb874e605b7a78f39d3 220 SUPERFAMILY SSF55282 25 200 4.0E-73 T 22-04-2016 IPR022803 Ribosomal protein L5 domain RM25_RS02670 7616733110c93bb874e605b7a78f39d3 220 Pfam PF00673 ribosomal L5P family C-terminus 107 199 2.9E-38 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal RM25_RS02670 7616733110c93bb874e605b7a78f39d3 220 PANTHER PTHR11994 23 200 4.6E-88 T 22-04-2016 RM25_RS09860 84418ed949e6626b71dc08e4861b826f 448 PANTHER PTHR11706:SF33 2 448 4.4E-170 T 22-04-2016 RM25_RS09860 84418ed949e6626b71dc08e4861b826f 448 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 31 411 1.1E-109 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RM25_RS09860 84418ed949e6626b71dc08e4861b826f 448 PRINTS PR00447 Natural resistance-associated macrophage protein signature 387 406 4.1E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RM25_RS09860 84418ed949e6626b71dc08e4861b826f 448 PRINTS PR00447 Natural resistance-associated macrophage protein signature 165 186 4.1E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RM25_RS09860 84418ed949e6626b71dc08e4861b826f 448 PRINTS PR00447 Natural resistance-associated macrophage protein signature 353 370 4.1E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RM25_RS09860 84418ed949e6626b71dc08e4861b826f 448 PRINTS PR00447 Natural resistance-associated macrophage protein signature 112 138 4.1E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RM25_RS09860 84418ed949e6626b71dc08e4861b826f 448 PRINTS PR00447 Natural resistance-associated macrophage protein signature 140 159 4.1E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RM25_RS09860 84418ed949e6626b71dc08e4861b826f 448 PRINTS PR00447 Natural resistance-associated macrophage protein signature 216 239 4.1E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RM25_RS09860 84418ed949e6626b71dc08e4861b826f 448 PRINTS PR00447 Natural resistance-associated macrophage protein signature 325 344 4.1E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RM25_RS09860 84418ed949e6626b71dc08e4861b826f 448 PANTHER PTHR11706 2 448 4.4E-170 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RM25_RS09860 84418ed949e6626b71dc08e4861b826f 448 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 16 444 36.596 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RM25_RS09860 84418ed949e6626b71dc08e4861b826f 448 Pfam PF01566 Natural resistance-associated macrophage protein 53 413 7.0E-118 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RM25_RS02100 e942f7568e9c1c13cb3a3b1c6238ff71 216 SUPERFAMILY SSF51064 135 189 1.7E-13 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RM25_RS02100 e942f7568e9c1c13cb3a3b1c6238ff71 216 Gene3D G3DSA:2.30.22.10 133 189 1.1E-17 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RM25_RS02100 e942f7568e9c1c13cb3a3b1c6238ff71 216 PANTHER PTHR21237 28 192 2.4E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS02100 e942f7568e9c1c13cb3a3b1c6238ff71 216 Pfam PF01025 GrpE 36 188 2.0E-33 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS02100 e942f7568e9c1c13cb3a3b1c6238ff71 216 Hamap MF_01151 Protein GrpE [grpE]. 11 189 15.894 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS02100 e942f7568e9c1c13cb3a3b1c6238ff71 216 SUPERFAMILY SSF58014 48 133 6.28E-15 T 22-04-2016 RM25_RS02100 e942f7568e9c1c13cb3a3b1c6238ff71 216 Gene3D G3DSA:3.90.20.20 44 126 6.3E-16 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil RM25_RS02100 e942f7568e9c1c13cb3a3b1c6238ff71 216 PRINTS PR00773 GrpE protein signature 141 156 8.3E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS02100 e942f7568e9c1c13cb3a3b1c6238ff71 216 PRINTS PR00773 GrpE protein signature 168 187 8.3E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS02100 e942f7568e9c1c13cb3a3b1c6238ff71 216 PRINTS PR00773 GrpE protein signature 66 82 8.3E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS02100 e942f7568e9c1c13cb3a3b1c6238ff71 216 PRINTS PR00773 GrpE protein signature 94 109 8.3E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RM25_RS09240 ac4a0977b4d675e70ad177b59715ff0c 190 SUPERFAMILY SSF110836 20 95 3.92E-5 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal RM25_RS09240 ac4a0977b4d675e70ad177b59715ff0c 190 SUPERFAMILY SSF117916 116 188 4.45E-16 T 22-04-2016 RM25_RS09240 ac4a0977b4d675e70ad177b59715ff0c 190 Pfam PF01106 NifU-like domain 133 185 1.1E-14 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 RM25_RS09240 ac4a0977b4d675e70ad177b59715ff0c 190 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 135 187 2.0E-7 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 RM25_RS04705 e45ee3781f98bb65c23f58a050333f7c 244 PANTHER PTHR30204 1 206 5.0E-29 T 22-04-2016 RM25_RS04705 e45ee3781f98bb65c23f58a050333f7c 244 Pfam PF00376 MerR family regulatory protein 8 49 1.2E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS04705 e45ee3781f98bb65c23f58a050333f7c 244 SUPERFAMILY SSF46955 18 87 6.41E-14 T 22-04-2016 IPR009061 Putative DNA-binding domain RM25_RS04705 e45ee3781f98bb65c23f58a050333f7c 244 Gene3D G3DSA:1.10.1660.10 22 89 2.9E-19 T 22-04-2016 RM25_RS04705 e45ee3781f98bb65c23f58a050333f7c 244 SMART SM00422 8 81 2.8E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS04705 e45ee3781f98bb65c23f58a050333f7c 244 PANTHER PTHR30204:SF9 1 206 5.0E-29 T 22-04-2016 RM25_RS03215 8a2a4c8575186e114fc192d6349b4b5d 343 PANTHER PTHR10642 2 143 1.5E-42 T 22-04-2016 RM25_RS03215 8a2a4c8575186e114fc192d6349b4b5d 343 Hamap MF_00042 Ribonuclease H [rnhA]. 1 146 25.248 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 RM25_RS03215 8a2a4c8575186e114fc192d6349b4b5d 343 Pfam PF14534 Domain of unknown function (DUF4440) 230 327 1.1E-6 T 22-04-2016 IPR027843 Domain of unknown function DUF4440 RM25_RS03215 8a2a4c8575186e114fc192d6349b4b5d 343 Gene3D G3DSA:3.30.420.10 2 139 1.6E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03215 8a2a4c8575186e114fc192d6349b4b5d 343 SUPERFAMILY SSF54427 223 335 1.5E-10 T 22-04-2016 IPR032710 NTF2-like domain RM25_RS03215 8a2a4c8575186e114fc192d6349b4b5d 343 Pfam PF00075 RNase H 6 137 1.9E-31 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 RM25_RS03215 8a2a4c8575186e114fc192d6349b4b5d 343 Gene3D G3DSA:3.10.450.50 223 335 4.5E-10 T 22-04-2016 IPR032710 NTF2-like domain RM25_RS03215 8a2a4c8575186e114fc192d6349b4b5d 343 SUPERFAMILY SSF53098 2 139 8.35E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS00985 e7973a7963f647bd01af9a4bae295bd3 469 PIRSF PIRSF006060 2 466 4.8E-74 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS00985 e7973a7963f647bd01af9a4bae295bd3 469 PANTHER PTHR11785:SF26 11 447 2.9E-171 T 22-04-2016 RM25_RS00985 e7973a7963f647bd01af9a4bae295bd3 469 Pfam PF00324 Amino acid permease 19 453 7.5E-116 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RM25_RS00985 e7973a7963f647bd01af9a4bae295bd3 469 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RM25_RS00985 e7973a7963f647bd01af9a4bae295bd3 469 PANTHER PTHR11785 11 447 2.9E-171 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS10500 f4bda620c50ba3638aeecaa57dc4c479 276 PANTHER PTHR30363 17 268 1.9E-58 T 22-04-2016 RM25_RS10500 f4bda620c50ba3638aeecaa57dc4c479 276 SMART SM00420 21 73 5.6E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RM25_RS10500 f4bda620c50ba3638aeecaa57dc4c479 276 SMART SM01134 88 248 6.9E-54 T 22-04-2016 RM25_RS10500 f4bda620c50ba3638aeecaa57dc4c479 276 Gene3D G3DSA:3.40.50.1360 91 231 7.7E-9 T 22-04-2016 RM25_RS10500 f4bda620c50ba3638aeecaa57dc4c479 276 Pfam PF08220 DeoR-like helix-turn-helix domain 21 73 2.9E-13 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RM25_RS10500 f4bda620c50ba3638aeecaa57dc4c479 276 Gene3D G3DSA:1.10.10.10 18 68 8.0E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10500 f4bda620c50ba3638aeecaa57dc4c479 276 SUPERFAMILY SSF100950 92 247 6.8E-22 T 22-04-2016 RM25_RS10500 f4bda620c50ba3638aeecaa57dc4c479 276 SUPERFAMILY SSF46785 19 78 5.91E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS10500 f4bda620c50ba3638aeecaa57dc4c479 276 PANTHER PTHR30363:SF1 17 268 1.9E-58 T 22-04-2016 RM25_RS10500 f4bda620c50ba3638aeecaa57dc4c479 276 Pfam PF00455 DeoR C terminal sensor domain 91 247 6.8E-42 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain RM25_RS06275 485abd145ff187894693843ffca76dc9 269 SUPERFAMILY SSF143414 184 255 1.83E-9 T 22-04-2016 RM25_RS06275 485abd145ff187894693843ffca76dc9 269 SMART SM00877 78 160 8.7E-5 T 22-04-2016 IPR000249 Microcompartment protein, bacteria RM25_RS06275 485abd145ff187894693843ffca76dc9 269 SMART SM00877 184 261 3.2E-9 T 22-04-2016 IPR000249 Microcompartment protein, bacteria RM25_RS06275 485abd145ff187894693843ffca76dc9 269 PIRSF PIRSF012290 36 269 2.7E-94 T 22-04-2016 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 RM25_RS06275 485abd145ff187894693843ffca76dc9 269 SUPERFAMILY SSF143414 78 155 3.14E-6 T 22-04-2016 RM25_RS06275 485abd145ff187894693843ffca76dc9 269 PANTHER PTHR40609:SF2 37 269 1.1E-129 T 22-04-2016 RM25_RS06275 485abd145ff187894693843ffca76dc9 269 PANTHER PTHR40609 37 269 1.1E-129 T 22-04-2016 RM25_RS06275 485abd145ff187894693843ffca76dc9 269 Pfam PF00936 BMC domain 185 253 2.7E-12 T 22-04-2016 IPR000249 Microcompartment protein, bacteria RM25_RS06275 485abd145ff187894693843ffca76dc9 269 Pfam PF00936 BMC domain 79 147 4.0E-7 T 22-04-2016 IPR000249 Microcompartment protein, bacteria RM25_RS06275 485abd145ff187894693843ffca76dc9 269 TIGRFAM TIGR04501 microcomp_PduB: microcompartment protein PduB 44 269 3.0E-117 T 22-04-2016 IPR030984 Microcompartment protein PduB GO:0005198 RM25_RS02045 2a3dd4e912cc75baadf2dc976dbd4c90 619 Pfam PF15420 Alpha/beta-hydrolase family N-terminus 61 293 2.5E-49 T 22-04-2016 IPR027788 Alpha/beta-hydrolase, N-terminal domain RM25_RS02045 2a3dd4e912cc75baadf2dc976dbd4c90 619 Pfam PF10081 Alpha/beta-hydrolase family 310 593 3.4E-97 T 22-04-2016 IPR027787 Alpha/beta-hydrolase, catalytic domain RM25_RS01565 f4e11512f3ef19778bc6b46ccf0f91d4 279 Pfam PF00665 Integrase core domain 101 216 2.1E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RM25_RS01565 f4e11512f3ef19778bc6b46ccf0f91d4 279 PANTHER PTHR32552 1 266 9.0E-55 T 22-04-2016 RM25_RS01565 f4e11512f3ef19778bc6b46ccf0f91d4 279 Gene3D G3DSA:3.30.420.10 95 259 4.7E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS01565 f4e11512f3ef19778bc6b46ccf0f91d4 279 Pfam PF13276 HTH-like domain 21 77 2.2E-11 T 22-04-2016 IPR025948 HTH-like domain RM25_RS01565 f4e11512f3ef19778bc6b46ccf0f91d4 279 SUPERFAMILY SSF53098 95 262 3.64E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS02620 81764dd4bd49f367f9f46659c1a5e658 103 Gene3D G3DSA:3.30.70.330 8 99 2.7E-36 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RM25_RS02620 81764dd4bd49f367f9f46659c1a5e658 103 SUPERFAMILY SSF54189 8 99 3.17E-33 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02620 81764dd4bd49f367f9f46659c1a5e658 103 PANTHER PTHR11620 7 97 3.3E-34 T 22-04-2016 RM25_RS02620 81764dd4bd49f367f9f46659c1a5e658 103 Pfam PF00276 Ribosomal protein L23 11 96 3.2E-32 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RM25_RS02620 81764dd4bd49f367f9f46659c1a5e658 103 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 10 99 22.255 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RM25_RS09220 1053c4774c493402e312a67a1e072556 474 Gene3D G3DSA:3.40.710.10 145 471 2.4E-80 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS09220 1053c4774c493402e312a67a1e072556 474 Gene3D G3DSA:3.90.1310.10 74 144 9.1E-14 T 22-04-2016 RM25_RS09220 1053c4774c493402e312a67a1e072556 474 Pfam PF00905 Penicillin binding protein transpeptidase domain 156 461 4.6E-59 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RM25_RS09220 1053c4774c493402e312a67a1e072556 474 SUPERFAMILY SSF56519 36 119 3.92E-8 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RM25_RS09220 1053c4774c493402e312a67a1e072556 474 PANTHER PTHR30627:SF3 1 472 9.8E-113 T 22-04-2016 RM25_RS09220 1053c4774c493402e312a67a1e072556 474 PANTHER PTHR30627 1 472 9.8E-113 T 22-04-2016 RM25_RS09220 1053c4774c493402e312a67a1e072556 474 SUPERFAMILY SSF56601 96 470 8.54E-79 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RM25_RS11920 65852fad3df9f999d6a45d034d0dae36 293 Pfam PF10708 Protein of unknown function (DUF2510) 4 38 4.3E-12 T 22-04-2016 IPR018929 Domain of unknown function DUF2510 RM25_RS05880 604fccba0fc9fcc8a44b88812c68a03c 68 SMART SM00357 3 67 4.2E-30 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RM25_RS05880 604fccba0fc9fcc8a44b88812c68a03c 68 PIRSF PIRSF002599 1 68 3.2E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 RM25_RS05880 604fccba0fc9fcc8a44b88812c68a03c 68 PRINTS PR00050 Cold shock protein signature 4 19 2.2E-20 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RM25_RS05880 604fccba0fc9fcc8a44b88812c68a03c 68 PRINTS PR00050 Cold shock protein signature 40 58 2.2E-20 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RM25_RS05880 604fccba0fc9fcc8a44b88812c68a03c 68 PRINTS PR00050 Cold shock protein signature 25 34 2.2E-20 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RM25_RS05880 604fccba0fc9fcc8a44b88812c68a03c 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site RM25_RS05880 604fccba0fc9fcc8a44b88812c68a03c 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 5.2E-30 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RM25_RS05880 604fccba0fc9fcc8a44b88812c68a03c 68 PANTHER PTHR11544 1 68 1.3E-36 T 22-04-2016 RM25_RS05880 604fccba0fc9fcc8a44b88812c68a03c 68 SUPERFAMILY SSF50249 1 67 7.93E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05880 604fccba0fc9fcc8a44b88812c68a03c 68 Gene3D G3DSA:2.40.50.140 1 66 7.3E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS06105 005fe4aa7c62a21df04108164643b825 333 PANTHER PTHR33608:SF5 22 324 1.0E-48 T 22-04-2016 RM25_RS06105 005fe4aa7c62a21df04108164643b825 333 SUPERFAMILY SSF53300 91 262 9.64E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS06105 005fe4aa7c62a21df04108164643b825 333 PANTHER PTHR33608 22 324 1.0E-48 T 22-04-2016 RM25_RS06105 005fe4aa7c62a21df04108164643b825 333 Pfam PF01882 Protein of unknown function DUF58 51 134 8.0E-13 T 22-04-2016 IPR002881 Domain of unknown function DUF58 RM25_RS06560 32e2d35694aa232cac8e2210241acd21 88 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 16 87 8.0E-8 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RM25_RS06560 32e2d35694aa232cac8e2210241acd21 88 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 6 88 9.0E-21 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RM25_RS06560 32e2d35694aa232cac8e2210241acd21 88 PANTHER PTHR21256:SF15 3 88 1.3E-20 T 22-04-2016 RM25_RS06560 32e2d35694aa232cac8e2210241acd21 88 PANTHER PTHR21256 3 88 1.3E-20 T 22-04-2016 RM25_RS06560 32e2d35694aa232cac8e2210241acd21 88 SUPERFAMILY SSF101386 4 88 3.92E-20 T 22-04-2016 RM25_RS05770 4bbb2ea5d8075588c6747921436a55cc 507 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 414 5.0E-77 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RM25_RS05770 4bbb2ea5d8075588c6747921436a55cc 507 Gene3D G3DSA:3.10.105.10 295 473 4.0E-40 T 22-04-2016 RM25_RS05770 4bbb2ea5d8075588c6747921436a55cc 507 PANTHER PTHR30290 1 491 5.1E-96 T 22-04-2016 RM25_RS05770 4bbb2ea5d8075588c6747921436a55cc 507 Gene3D G3DSA:3.40.190.10 194 294 1.1E-32 T 22-04-2016 RM25_RS05770 4bbb2ea5d8075588c6747921436a55cc 507 SUPERFAMILY SSF53850 38 501 3.02E-106 T 22-04-2016 RM25_RS05770 4bbb2ea5d8075588c6747921436a55cc 507 PIRSF PIRSF002741 6 506 6.0E-84 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RM25_RS05770 4bbb2ea5d8075588c6747921436a55cc 507 Gene3D G3DSA:3.90.76.10 49 193 7.6E-34 T 22-04-2016 RM25_RS11045 ba2c2dfee43d5c87962a232a10b3f6dd 201 SUPERFAMILY SSF160379 9 121 2.48E-28 T 22-04-2016 RM25_RS11045 ba2c2dfee43d5c87962a232a10b3f6dd 201 Pfam PF08002 Protein of unknown function (DUF1697) 9 121 3.3E-29 T 22-04-2016 IPR012545 Protein of unknown function DUF1697 RM25_RS11045 ba2c2dfee43d5c87962a232a10b3f6dd 201 PANTHER PTHR36439 8 129 7.5E-23 T 22-04-2016 RM25_RS11045 ba2c2dfee43d5c87962a232a10b3f6dd 201 PANTHER PTHR36439:SF1 8 129 7.5E-23 T 22-04-2016 RM25_RS11045 ba2c2dfee43d5c87962a232a10b3f6dd 201 Gene3D G3DSA:3.30.70.1280 8 93 1.6E-24 T 22-04-2016 RM25_RS07145 c49d51d939a273ed49a1b91724b84c77 344 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 4 318 1.3E-104 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 RM25_RS07145 c49d51d939a273ed49a1b91724b84c77 344 PANTHER PTHR30238:SF0 2 332 3.6E-124 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 RM25_RS07145 c49d51d939a273ed49a1b91724b84c77 344 Pfam PF03741 Integral membrane protein TerC family 69 278 4.3E-48 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RM25_RS07145 c49d51d939a273ed49a1b91724b84c77 344 PANTHER PTHR30238 2 332 3.6E-124 T 22-04-2016 RM25_RS09335 a42ae92261c8edebe313b8ee3c2887e4 143 Gene3D G3DSA:3.50.80.10 1 141 4.0E-51 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RM25_RS09335 a42ae92261c8edebe313b8ee3c2887e4 143 SUPERFAMILY SSF69500 1 141 7.32E-46 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RM25_RS09335 a42ae92261c8edebe313b8ee3c2887e4 143 PANTHER PTHR10472 2 141 5.8E-57 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RM25_RS09335 a42ae92261c8edebe313b8ee3c2887e4 143 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 140 1.1E-47 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RM25_RS09335 a42ae92261c8edebe313b8ee3c2887e4 143 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 141 7.6E-43 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RM25_RS09335 a42ae92261c8edebe313b8ee3c2887e4 143 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 141 30.858 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.8E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 5.8E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 5.8E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 5.8E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 5.8E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 PANTHER PTHR24322 143 173 1.6E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 PANTHER PTHR24322 9 127 1.6E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 SUPERFAMILY SSF51735 4 214 1.62E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 178 2.5E-5 T 22-04-2016 RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 Pfam PF00106 short chain dehydrogenase 6 185 1.2E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 1.0E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 1.0E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 1.0E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS00800 60576ee942173b7c5644f4f680eaf9b7 227 Gene3D G3DSA:3.40.50.720 3 209 8.9E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06425 44eea6b952e5271bef8fec11c118d4fd 563 Gene3D G3DSA:3.40.50.300 1 207 1.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06425 44eea6b952e5271bef8fec11c118d4fd 563 PANTHER PTHR11059 2 563 2.7E-137 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RM25_RS06425 44eea6b952e5271bef8fec11c118d4fd 563 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 555 1.5E-151 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RM25_RS06425 44eea6b952e5271bef8fec11c118d4fd 563 Pfam PF02463 RecF/RecN/SMC N terminal domain 4 516 1.1E-12 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RM25_RS06425 44eea6b952e5271bef8fec11c118d4fd 563 Gene3D G3DSA:3.40.50.300 436 514 3.6E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06425 44eea6b952e5271bef8fec11c118d4fd 563 PIRSF PIRSF003128 1 561 2.4E-149 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RM25_RS06425 44eea6b952e5271bef8fec11c118d4fd 563 SUPERFAMILY SSF52540 1 200 4.04E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06425 44eea6b952e5271bef8fec11c118d4fd 563 SUPERFAMILY SSF52540 321 516 4.04E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10310 dadd4735bb56365f78d5158ce30df209 296 Pfam PF00482 Type II secretion system (T2SS), protein F 108 232 7.3E-9 T 22-04-2016 IPR018076 Type II secretion system F domain RM25_RS01145 f4ebcb0931cbe4df607604c8e04c5fd3 208 PANTHER PTHR30336 1 191 5.6E-48 T 22-04-2016 RM25_RS01145 f4ebcb0931cbe4df607604c8e04c5fd3 208 Gene3D G3DSA:3.40.50.620 28 153 4.0E-10 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS01145 f4ebcb0931cbe4df607604c8e04c5fd3 208 PANTHER PTHR30336:SF0 1 191 5.6E-48 T 22-04-2016 RM25_RS01145 f4ebcb0931cbe4df607604c8e04c5fd3 208 Pfam PF02698 DUF218 domain 34 163 8.3E-21 T 22-04-2016 IPR003848 Domain of unknown function DUF218 RM25_RS09250 b940e67e44d4352a3a6c7a6198d6a748 91 PANTHER PTHR33238 1 79 5.0E-12 T 22-04-2016 RM25_RS09250 b940e67e44d4352a3a6c7a6198d6a748 91 SMART SM00899 1 75 2.3E-12 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RM25_RS09250 b940e67e44d4352a3a6c7a6198d6a748 91 SUPERFAMILY SSF50037 4 75 4.27E-14 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal RM25_RS09250 b940e67e44d4352a3a6c7a6198d6a748 91 Pfam PF04023 FeoA domain 1 74 1.1E-14 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RM25_RS09625 ee4de69ea3ee48a4f19ec0cf9830cc01 504 Pfam PF02687 FtsX-like permease family 330 489 3.4E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RM25_RS09625 ee4de69ea3ee48a4f19ec0cf9830cc01 504 PANTHER PTHR30572:SF7 178 412 4.7E-43 T 22-04-2016 RM25_RS09625 ee4de69ea3ee48a4f19ec0cf9830cc01 504 PANTHER PTHR30572:SF7 3 136 4.7E-43 T 22-04-2016 RM25_RS09625 ee4de69ea3ee48a4f19ec0cf9830cc01 504 PANTHER PTHR30572:SF7 461 503 4.7E-43 T 22-04-2016 RM25_RS09625 ee4de69ea3ee48a4f19ec0cf9830cc01 504 PANTHER PTHR30572 178 412 4.7E-43 T 22-04-2016 RM25_RS09625 ee4de69ea3ee48a4f19ec0cf9830cc01 504 PANTHER PTHR30572 3 136 4.7E-43 T 22-04-2016 RM25_RS09625 ee4de69ea3ee48a4f19ec0cf9830cc01 504 PANTHER PTHR30572 461 503 4.7E-43 T 22-04-2016 RM25_RS11230 5b42a13619cc3fdb84020b244afe4bc4 327 Gene3D G3DSA:1.10.3720.10 93 316 5.5E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11230 5b42a13619cc3fdb84020b244afe4bc4 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 325 4.3E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11230 5b42a13619cc3fdb84020b244afe4bc4 327 PANTHER PTHR30465:SF24 1 326 1.4E-64 T 22-04-2016 RM25_RS11230 5b42a13619cc3fdb84020b244afe4bc4 327 PANTHER PTHR30465 1 326 1.4E-64 T 22-04-2016 RM25_RS11230 5b42a13619cc3fdb84020b244afe4bc4 327 SUPERFAMILY SSF161098 189 308 6.54E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11230 5b42a13619cc3fdb84020b244afe4bc4 327 SUPERFAMILY SSF161098 96 162 6.54E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS09590 3acbeb0c68eea1dec3b44a83dd65a121 180 SUPERFAMILY SSF53254 1 166 3.43E-17 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS09590 3acbeb0c68eea1dec3b44a83dd65a121 180 Gene3D G3DSA:3.40.50.1240 1 154 1.0E-31 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS09590 3acbeb0c68eea1dec3b44a83dd65a121 180 SMART SM00855 4 116 2.8E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS09590 3acbeb0c68eea1dec3b44a83dd65a121 180 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 65 2.4E-9 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 Gene3D G3DSA:1.10.287.130 374 434 5.3E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 Pfam PF00512 His Kinase A (phospho-acceptor) domain 384 448 5.1E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 SMART SM00304 312 374 1.8E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 SUPERFAMILY SSF47384 368 448 4.71E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 493 603 2.0E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 SUPERFAMILY SSF55874 438 606 1.13E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 SMART SM00388 382 449 5.6E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 Pfam PF00672 HAMP domain 294 370 8.3E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 Gene3D G3DSA:3.30.565.10 435 606 6.9E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 SMART SM00387 492 604 6.0E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 543 6.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 557 6.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 601 6.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 583 6.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RM25_RS01455 eb6004cccf9154b0cdeb12997da1c9d5 621 PANTHER PTHR24423 354 615 9.5E-72 T 22-04-2016 RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 Gene3D G3DSA:3.40.640.10 50 124 7.7E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 Gene3D G3DSA:3.40.640.10 156 328 7.7E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 269 285 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 Gene3D G3DSA:3.90.1150.10 329 478 4.6E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 PIRSF PIRSF000412 4 481 6.4E-155 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 PANTHER PTHR11680:SF0 163 435 2.4E-159 T 22-04-2016 RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 PANTHER PTHR11680:SF0 17 121 2.4E-159 T 22-04-2016 RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 20 478 42.747 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 SUPERFAMILY SSF53383 157 478 9.88E-136 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 SUPERFAMILY SSF53383 13 125 9.88E-136 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 PANTHER PTHR11680 163 435 2.4E-159 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 PANTHER PTHR11680 17 121 2.4E-159 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 Pfam PF00464 Serine hydroxymethyltransferase 24 125 7.8E-25 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RM25_RS08780 e68f2e16579ca60a4a0618c0635882a4 482 Pfam PF00464 Serine hydroxymethyltransferase 158 431 1.6E-91 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RM25_RS09260 dee34cb7027e4e4b4cd6275db49b12a8 526 PANTHER PTHR32507 1 493 6.4E-144 T 22-04-2016 RM25_RS09260 dee34cb7027e4e4b4cd6275db49b12a8 526 Pfam PF02080 TrkA-C domain 416 480 5.4E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RM25_RS09260 dee34cb7027e4e4b4cd6275db49b12a8 526 PANTHER PTHR32507:SF7 1 493 6.4E-144 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 RM25_RS09260 dee34cb7027e4e4b4cd6275db49b12a8 526 Gene3D G3DSA:3.30.70.1450 413 479 2.1E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RM25_RS09260 dee34cb7027e4e4b4cd6275db49b12a8 526 Pfam PF00999 Sodium/hydrogen exchanger family 14 386 1.2E-49 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RM25_RS09260 dee34cb7027e4e4b4cd6275db49b12a8 526 SUPERFAMILY SSF116726 405 479 4.58E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RM25_RS01120 cbac2665e34ea6264982a8f1509a5357 290 Pfam PF01012 Electron transfer flavoprotein domain 15 138 2.7E-11 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RM25_RS01120 cbac2665e34ea6264982a8f1509a5357 290 Gene3D G3DSA:3.40.50.620 3 121 9.5E-12 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS01120 cbac2665e34ea6264982a8f1509a5357 290 PIRSF PIRSF000089 4 290 2.1E-66 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 RM25_RS01120 cbac2665e34ea6264982a8f1509a5357 290 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 167 251 5.2E-29 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RM25_RS01120 cbac2665e34ea6264982a8f1509a5357 290 PANTHER PTHR10909:SF306 167 286 1.1E-33 T 22-04-2016 RM25_RS01120 cbac2665e34ea6264982a8f1509a5357 290 Gene3D G3DSA:3.40.50.1220 161 289 4.8E-48 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS01120 cbac2665e34ea6264982a8f1509a5357 290 SUPERFAMILY SSF52467 167 288 3.57E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS01120 cbac2665e34ea6264982a8f1509a5357 290 SUPERFAMILY SSF52402 15 126 5.09E-13 T 22-04-2016 RM25_RS01120 cbac2665e34ea6264982a8f1509a5357 290 PANTHER PTHR10909 167 286 1.1E-33 T 22-04-2016 RM25_RS01120 cbac2665e34ea6264982a8f1509a5357 290 SMART SM00893 3 166 0.0044 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 90 699 8.5E-187 T 22-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 Gene3D G3DSA:3.20.70.20 51 476 1.9E-104 T 22-04-2016 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 Gene3D G3DSA:3.20.70.20 535 581 1.9E-104 T 22-04-2016 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 Gene3D G3DSA:3.20.70.20 648 693 1.9E-104 T 22-04-2016 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 49 132 1.1E-19 T 22-04-2016 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 PANTHER PTHR11573:SF18 32 262 0.0 T 22-04-2016 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 PANTHER PTHR11573:SF18 917 963 0.0 T 22-04-2016 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 PANTHER PTHR11573:SF18 285 882 0.0 T 22-04-2016 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 229 248 2.3E-13 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 428 450 2.3E-13 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 390 413 2.3E-13 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 356 367 2.3E-13 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 535 562 2.3E-13 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 Pfam PF02867 Ribonucleotide reductase, barrel domain 153 689 4.8E-144 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 SUPERFAMILY SSF51998 619 693 2.23E-132 T 22-04-2016 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 SUPERFAMILY SSF51998 153 585 2.23E-132 T 22-04-2016 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 PANTHER PTHR11573 32 262 0.0 T 22-04-2016 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 PANTHER PTHR11573 917 963 0.0 T 22-04-2016 RM25_RS04390 6c586201a09497114bcc3832a4e2eded 963 PANTHER PTHR11573 285 882 0.0 T 22-04-2016 RM25_RS07350 b25ee9628ba266fb564af1110f1c5136 461 Pfam PF01474 Class-II DAHP synthetase family 10 440 1.4E-196 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RM25_RS07350 b25ee9628ba266fb564af1110f1c5136 461 SUPERFAMILY SSF51569 8 444 4.1E-190 T 22-04-2016 RM25_RS07350 b25ee9628ba266fb564af1110f1c5136 461 PANTHER PTHR21337 10 449 3.1E-250 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RM25_RS07350 b25ee9628ba266fb564af1110f1c5136 461 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 10 446 1.6E-210 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RM25_RS10000 6c9ccf0c5eb34ef2200c5010b62f6684 470 SUPERFAMILY SSF52467 292 463 8.18E-76 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS10000 6c9ccf0c5eb34ef2200c5010b62f6684 470 PANTHER PTHR10160 3 469 2.1E-239 T 22-04-2016 RM25_RS10000 6c9ccf0c5eb34ef2200c5010b62f6684 470 Gene3D G3DSA:3.40.50.1220 290 464 2.4E-90 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RM25_RS10000 6c9ccf0c5eb34ef2200c5010b62f6684 470 PIRSF PIRSF000204 8 465 5.5E-201 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RM25_RS10000 6c9ccf0c5eb34ef2200c5010b62f6684 470 Pfam PF02233 NAD(P) transhydrogenase beta subunit 15 461 1.2E-192 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 PANTHER PTHR22594 451 574 1.3E-238 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 PANTHER PTHR22594:SF5 451 574 1.3E-238 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 560 1.0E-99 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 584 3.0E-206 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 1.2E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 1.2E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 1.2E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 1.2E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 566 34.937 T 22-04-2016 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 Pfam PF01336 OB-fold nucleic acid binding domain 19 102 3.6E-13 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 SUPERFAMILY SSF50249 3 105 1.9E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 PANTHER PTHR22594 1 298 1.3E-238 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 SUPERFAMILY SSF55261 290 411 1.29E-34 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 Gene3D G3DSA:3.30.930.10 133 277 4.4E-106 T 22-04-2016 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 Gene3D G3DSA:3.30.930.10 407 586 4.4E-106 T 22-04-2016 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 Gene3D G3DSA:3.30.1360.30 278 406 3.4E-43 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 PANTHER PTHR22594:SF5 1 298 1.3E-238 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 PANTHER PTHR22594:SF5 362 428 1.3E-238 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 PANTHER PTHR22594 362 428 1.3E-238 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 Pfam PF02938 GAD domain 313 395 1.4E-15 T 22-04-2016 IPR029351 GAD domain RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 Gene3D G3DSA:2.40.50.140 3 106 1.3E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 SUPERFAMILY SSF55681 120 312 3.45E-100 T 22-04-2016 RM25_RS05085 032ff6f59038fe69e453a57ccf57ebc0 615 SUPERFAMILY SSF55681 399 560 3.45E-100 T 22-04-2016 RM25_RS03005 37406013a578f815146ce19472ac8089 100 SUPERFAMILY SSF48600 8 95 5.19E-23 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RM25_RS03005 37406013a578f815146ce19472ac8089 100 Gene3D G3DSA:1.20.59.10 6 93 1.7E-19 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RM25_RS03005 37406013a578f815146ce19472ac8089 100 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 8 97 4.6E-40 T 22-04-2016 IPR010951 Chorismate mutase, bacteria RM25_RS03005 37406013a578f815146ce19472ac8089 100 Pfam PF01817 Chorismate mutase type II 16 91 2.2E-16 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RM25_RS03005 37406013a578f815146ce19472ac8089 100 SMART SM00830 16 96 1.9E-21 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RM25_RS08375 d57131ebd20651ccff2d8905589d69c9 255 Gene3D G3DSA:3.40.50.620 5 41 1.5E-4 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS08375 d57131ebd20651ccff2d8905589d69c9 255 Gene3D G3DSA:3.40.50.620 97 219 3.4E-5 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS08375 d57131ebd20651ccff2d8905589d69c9 255 PRINTS PR01438 Universal stress protein signature 4 22 1.8E-5 T 22-04-2016 IPR006015 Universal stress protein A RM25_RS08375 d57131ebd20651ccff2d8905589d69c9 255 PRINTS PR01438 Universal stress protein signature 72 84 1.8E-5 T 22-04-2016 IPR006015 Universal stress protein A RM25_RS08375 d57131ebd20651ccff2d8905589d69c9 255 PRINTS PR01438 Universal stress protein signature 90 112 1.8E-5 T 22-04-2016 IPR006015 Universal stress protein A RM25_RS08375 d57131ebd20651ccff2d8905589d69c9 255 SUPERFAMILY SSF52402 6 114 1.0E-9 T 22-04-2016 RM25_RS05680 7b845dad95288b1c34b1f71a15f80262 82 PANTHER PTHR38839 1 77 2.2E-36 T 22-04-2016 RM25_RS05680 7b845dad95288b1c34b1f71a15f80262 82 Pfam PF02467 Transcription factor WhiB 3 71 3.4E-27 T 22-04-2016 IPR003482 Transcription factor WhiB RM25_RS05680 7b845dad95288b1c34b1f71a15f80262 82 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 78 14.339 T 22-04-2016 IPR003482 Transcription factor WhiB RM25_RS05680 7b845dad95288b1c34b1f71a15f80262 82 PANTHER PTHR38839:SF3 1 77 2.2E-36 T 22-04-2016 RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 SUPERFAMILY SSF56112 8 319 4.32E-80 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 Gene3D G3DSA:1.10.510.10 101 331 2.4E-51 T 22-04-2016 RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 137 149 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 SMART SM00740 372 438 1.1E-9 T 22-04-2016 IPR005543 PASTA domain RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 SMART SM00740 511 576 0.62 T 22-04-2016 IPR005543 PASTA domain RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 SMART SM00740 439 510 5.8E-11 T 22-04-2016 IPR005543 PASTA domain RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 Gene3D G3DSA:3.30.200.20 7 97 8.0E-28 T 22-04-2016 RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 Pfam PF00069 Protein kinase domain 12 269 2.2E-51 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 Pfam PF03793 PASTA domain 377 437 2.4E-8 T 22-04-2016 IPR005543 PASTA domain RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 Pfam PF03793 PASTA domain 515 575 9.9E-6 T 22-04-2016 IPR005543 PASTA domain RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 Pfam PF03793 PASTA domain 444 507 3.2E-11 T 22-04-2016 IPR005543 PASTA domain RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 SMART SM00220 12 277 1.7E-67 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 PANTHER PTHR24362:SF160 1 323 1.4E-108 T 22-04-2016 RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 PANTHER PTHR24362:SF160 397 522 1.4E-108 T 22-04-2016 RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 PANTHER PTHR24362 1 323 1.4E-108 T 22-04-2016 RM25_RS09225 689b5b8592d27ab676104bdec6b7c7f0 594 PANTHER PTHR24362 397 522 1.4E-108 T 22-04-2016 RM25_RS11785 9cfdebf33b2b7f6fa6530ec184b1b3c2 1043 Pfam PF00270 DEAD/DEAH box helicase 638 807 2.7E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RM25_RS11785 9cfdebf33b2b7f6fa6530ec184b1b3c2 1043 Pfam PF00271 Helicase conserved C-terminal domain 849 949 5.4E-24 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS11785 9cfdebf33b2b7f6fa6530ec184b1b3c2 1043 Gene3D G3DSA:3.40.50.300 603 823 4.6E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11785 9cfdebf33b2b7f6fa6530ec184b1b3c2 1043 SUPERFAMILY SSF52540 686 963 1.72E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11785 9cfdebf33b2b7f6fa6530ec184b1b3c2 1043 PANTHER PTHR24031 615 976 1.5E-159 T 22-04-2016 RM25_RS11785 9cfdebf33b2b7f6fa6530ec184b1b3c2 1043 Gene3D G3DSA:3.40.50.300 824 983 2.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11785 9cfdebf33b2b7f6fa6530ec184b1b3c2 1043 SMART SM00490 868 949 5.0E-30 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS11785 9cfdebf33b2b7f6fa6530ec184b1b3c2 1043 SMART SM00487 633 834 1.0E-49 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS11785 9cfdebf33b2b7f6fa6530ec184b1b3c2 1043 PANTHER PTHR24031:SF334 615 976 1.5E-159 T 22-04-2016 RM25_RS04605 0a60e0b75f24dd958cc33a0a73ca6729 174 Pfam PF04073 Aminoacyl-tRNA editing domain 38 158 2.7E-17 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RM25_RS04605 0a60e0b75f24dd958cc33a0a73ca6729 174 SUPERFAMILY SSF55826 34 169 3.79E-23 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RM25_RS04605 0a60e0b75f24dd958cc33a0a73ca6729 174 Gene3D G3DSA:3.90.960.10 25 170 8.8E-29 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RM25_RS04605 0a60e0b75f24dd958cc33a0a73ca6729 174 PANTHER PTHR30411 41 169 1.5E-30 T 22-04-2016 RM25_RS04605 0a60e0b75f24dd958cc33a0a73ca6729 174 PANTHER PTHR30411:SF1 41 169 1.5E-30 T 22-04-2016 RM25_RS04670 9be4591c5ff40414a1aa44f79a8b8065 381 Pfam PF13692 Glycosyl transferases group 1 197 328 1.8E-22 T 22-04-2016 RM25_RS04670 9be4591c5ff40414a1aa44f79a8b8065 381 SUPERFAMILY SSF53756 5 360 1.39E-64 T 22-04-2016 RM25_RS04670 9be4591c5ff40414a1aa44f79a8b8065 381 PANTHER PTHR12526 1 360 5.3E-77 T 22-04-2016 RM25_RS04670 9be4591c5ff40414a1aa44f79a8b8065 381 Pfam PF13439 Glycosyltransferase Family 4 14 180 1.7E-26 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RM25_RS04670 9be4591c5ff40414a1aa44f79a8b8065 381 PANTHER PTHR12526:SF368 1 360 5.3E-77 T 22-04-2016 RM25_RS04670 9be4591c5ff40414a1aa44f79a8b8065 381 Gene3D G3DSA:3.40.50.2000 192 334 1.3E-18 T 22-04-2016 RM25_RS03780 1c8c6604e50d958f312368fecd44d7d7 293 PANTHER PTHR31793:SF1 154 286 3.2E-19 T 22-04-2016 RM25_RS03780 1c8c6604e50d958f312368fecd44d7d7 293 Pfam PF13279 Thioesterase-like superfamily 156 281 2.2E-14 T 22-04-2016 RM25_RS03780 1c8c6604e50d958f312368fecd44d7d7 293 Gene3D G3DSA:3.10.129.10 134 287 1.7E-37 T 22-04-2016 IPR029069 HotDog domain RM25_RS03780 1c8c6604e50d958f312368fecd44d7d7 293 Gene3D G3DSA:3.10.129.10 4 127 1.5E-27 T 22-04-2016 IPR029069 HotDog domain RM25_RS03780 1c8c6604e50d958f312368fecd44d7d7 293 SUPERFAMILY SSF54637 145 286 3.47E-25 T 22-04-2016 IPR029069 HotDog domain RM25_RS03780 1c8c6604e50d958f312368fecd44d7d7 293 PANTHER PTHR31793 154 286 3.2E-19 T 22-04-2016 RM25_RS03780 1c8c6604e50d958f312368fecd44d7d7 293 SUPERFAMILY SSF54637 2 127 2.86E-22 T 22-04-2016 IPR029069 HotDog domain RM25_RS03780 1c8c6604e50d958f312368fecd44d7d7 293 Pfam PF03061 Thioesterase superfamily 18 95 3.2E-8 T 22-04-2016 IPR006683 Thioesterase domain RM25_RS07680 b95bac58e9545c7ae9dd42f6d8ae4515 389 PIRSF PIRSF005962 2 386 5.2E-100 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RM25_RS07680 b95bac58e9545c7ae9dd42f6d8ae4515 389 SUPERFAMILY SSF55031 181 291 2.69E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS07680 b95bac58e9545c7ae9dd42f6d8ae4515 389 Pfam PF07687 Peptidase dimerisation domain 181 276 4.8E-6 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS07680 b95bac58e9545c7ae9dd42f6d8ae4515 389 Gene3D G3DSA:3.30.70.360 177 293 1.1E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS07680 b95bac58e9545c7ae9dd42f6d8ae4515 389 SUPERFAMILY SSF53187 5 193 6.91E-68 T 22-04-2016 RM25_RS07680 b95bac58e9545c7ae9dd42f6d8ae4515 389 SUPERFAMILY SSF53187 294 384 6.91E-68 T 22-04-2016 RM25_RS07680 b95bac58e9545c7ae9dd42f6d8ae4515 389 Pfam PF01546 Peptidase family M20/M25/M40 67 382 6.7E-30 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RM25_RS07680 b95bac58e9545c7ae9dd42f6d8ae4515 389 PANTHER PTHR11014:SF63 12 382 5.0E-103 T 22-04-2016 RM25_RS07680 b95bac58e9545c7ae9dd42f6d8ae4515 389 PANTHER PTHR11014 12 382 5.0E-103 T 22-04-2016 RM25_RS07680 b95bac58e9545c7ae9dd42f6d8ae4515 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 11 370 4.5E-84 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RM25_RS07680 b95bac58e9545c7ae9dd42f6d8ae4515 389 Gene3D G3DSA:3.40.630.10 294 383 1.3E-81 T 22-04-2016 RM25_RS07680 b95bac58e9545c7ae9dd42f6d8ae4515 389 Gene3D G3DSA:3.40.630.10 4 174 1.3E-81 T 22-04-2016 RM25_RS02345 21e4a719b6400cd20a02c98c3d0df631 255 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 162 217 1.0E-19 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RM25_RS02345 21e4a719b6400cd20a02c98c3d0df631 255 PANTHER PTHR10884 47 235 1.8E-69 T 22-04-2016 RM25_RS02345 21e4a719b6400cd20a02c98c3d0df631 255 PANTHER PTHR10884:SF6 47 235 1.8E-69 T 22-04-2016 RM25_RS02345 21e4a719b6400cd20a02c98c3d0df631 255 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 92 242 28.292 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RM25_RS02345 21e4a719b6400cd20a02c98c3d0df631 255 SUPERFAMILY SSF143243 87 250 5.23E-52 T 22-04-2016 RM25_RS02345 21e4a719b6400cd20a02c98c3d0df631 255 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 112 233 4.0E-45 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RM25_RS02345 21e4a719b6400cd20a02c98c3d0df631 255 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 113 234 1.1E-43 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RM25_RS10830 fb1c7283732f562f538f745d2c8bc485 316 Gene3D G3DSA:1.10.340.30 113 235 1.1E-14 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RM25_RS10830 fb1c7283732f562f538f745d2c8bc485 316 SUPERFAMILY SSF48150 99 279 2.36E-20 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RM25_RS01630 e4c1b2e04a540c56e948871e9bb869d6 438 PANTHER PTHR36106:SF2 1 438 2.0E-178 T 22-04-2016 RM25_RS01630 e4c1b2e04a540c56e948871e9bb869d6 438 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 437 1.0E-151 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 RM25_RS01630 e4c1b2e04a540c56e948871e9bb869d6 438 PIRSF PIRSF004539 1 438 7.6E-149 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 RM25_RS01630 e4c1b2e04a540c56e948871e9bb869d6 438 PANTHER PTHR36106 1 438 2.0E-178 T 22-04-2016 RM25_RS01630 e4c1b2e04a540c56e948871e9bb869d6 438 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 369 1.4E-131 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 RM25_RS10805 8cbda1d2fec50ad18fa0ca914e727736 154 SMART SM00226 4 148 3.8E-36 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RM25_RS10805 8cbda1d2fec50ad18fa0ca914e727736 154 Gene3D G3DSA:3.40.50.270 5 147 5.7E-40 T 22-04-2016 RM25_RS10805 8cbda1d2fec50ad18fa0ca914e727736 154 SUPERFAMILY SSF52788 4 147 3.01E-37 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RM25_RS10805 8cbda1d2fec50ad18fa0ca914e727736 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 144 4.3E-30 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RM25_RS10805 8cbda1d2fec50ad18fa0ca914e727736 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 8.9E-19 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RM25_RS10805 8cbda1d2fec50ad18fa0ca914e727736 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 8.9E-19 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RM25_RS10805 8cbda1d2fec50ad18fa0ca914e727736 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 8.9E-19 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RM25_RS10805 8cbda1d2fec50ad18fa0ca914e727736 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 8.9E-19 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RM25_RS10805 8cbda1d2fec50ad18fa0ca914e727736 154 PANTHER PTHR11717 7 150 2.9E-30 T 22-04-2016 RM25_RS06325 ee48ce6caec3133a69ddc56ac4c6cc09 338 Gene3D G3DSA:3.20.20.100 1 315 7.8E-97 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS06325 ee48ce6caec3133a69ddc56ac4c6cc09 338 SUPERFAMILY SSF51430 1 315 7.2E-94 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS06325 ee48ce6caec3133a69ddc56ac4c6cc09 338 Pfam PF00248 Aldo/keto reductase family 15 314 2.9E-73 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS06325 ee48ce6caec3133a69ddc56ac4c6cc09 338 PANTHER PTHR11732 1 315 1.3E-126 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RM25_RS09630 05ed343a157bd84032334f3b0768aeef 280 PANTHER PTHR24220:SF86 3 220 2.5E-86 T 22-04-2016 RM25_RS09630 05ed343a157bd84032334f3b0768aeef 280 Pfam PF00005 ABC transporter 20 168 1.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS09630 05ed343a157bd84032334f3b0768aeef 280 SUPERFAMILY SSF52540 3 225 1.05E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09630 05ed343a157bd84032334f3b0768aeef 280 PANTHER PTHR24220 3 220 2.5E-86 T 22-04-2016 RM25_RS09630 05ed343a157bd84032334f3b0768aeef 280 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS09630 05ed343a157bd84032334f3b0768aeef 280 Gene3D G3DSA:3.40.50.300 4 224 2.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09630 05ed343a157bd84032334f3b0768aeef 280 SMART SM00382 29 219 9.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09845 594f692f8a7e6ec53563a22364656ba1 559 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 46 456 1.2E-70 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RM25_RS09845 594f692f8a7e6ec53563a22364656ba1 559 PANTHER PTHR11819:SF7 15 514 5.1E-146 T 22-04-2016 RM25_RS09845 594f692f8a7e6ec53563a22364656ba1 559 Pfam PF00474 Sodium:solute symporter family 46 456 7.1E-49 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RM25_RS09845 594f692f8a7e6ec53563a22364656ba1 559 PANTHER PTHR11819 15 514 5.1E-146 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RM25_RS06070 be26df67bdb0c82891f0207579b62162 83 SUPERFAMILY SSF47336 3 80 8.24E-23 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RM25_RS06070 be26df67bdb0c82891f0207579b62162 83 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 18.37 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RM25_RS06070 be26df67bdb0c82891f0207579b62162 83 Gene3D G3DSA:1.10.1200.10 2 79 6.7E-26 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RM25_RS06070 be26df67bdb0c82891f0207579b62162 83 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 37 76 2.0E-8 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RM25_RS06070 be26df67bdb0c82891f0207579b62162 83 PANTHER PTHR20863:SF28 6 78 6.1E-20 T 22-04-2016 RM25_RS06070 be26df67bdb0c82891f0207579b62162 83 Pfam PF00550 Phosphopantetheine attachment site 10 76 7.4E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RM25_RS06070 be26df67bdb0c82891f0207579b62162 83 PANTHER PTHR20863 6 78 6.1E-20 T 22-04-2016 RM25_RS06070 be26df67bdb0c82891f0207579b62162 83 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 4 79 3.6E-22 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RM25_RS00280 441209f93f3e3d7456a8e015b6f110cd 293 PANTHER PTHR22916 156 251 1.9E-22 T 22-04-2016 RM25_RS00280 441209f93f3e3d7456a8e015b6f110cd 293 PANTHER PTHR22916 1 140 1.9E-22 T 22-04-2016 RM25_RS00280 441209f93f3e3d7456a8e015b6f110cd 293 Gene3D G3DSA:3.90.550.10 2 242 2.1E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS00280 441209f93f3e3d7456a8e015b6f110cd 293 SUPERFAMILY SSF53448 1 225 9.96E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS00280 441209f93f3e3d7456a8e015b6f110cd 293 Pfam PF00535 Glycosyl transferase family 2 4 113 4.0E-18 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 Gene3D G3DSA:3.40.1380.10 64 197 1.4E-34 T 22-04-2016 RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 Pfam PF00231 ATP synthase 4 304 4.1E-79 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 3 304 2.0E-86 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 PANTHER PTHR11693 1 306 7.6E-91 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 290 303 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 304 31.169 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 Gene3D G3DSA:1.10.287.80 20 61 4.6E-24 T 22-04-2016 RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 Gene3D G3DSA:1.10.287.80 219 252 4.6E-24 T 22-04-2016 RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 Gene3D G3DSA:1.10.287.80 253 299 1.0E-22 T 22-04-2016 RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 SUPERFAMILY SSF52943 4 304 1.7E-76 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 PRINTS PR00126 ATP synthase gamma subunit signature 282 303 2.7E-32 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 PRINTS PR00126 ATP synthase gamma subunit signature 251 270 2.7E-32 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 2.7E-32 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS05570 41c7142bb6d14b2641c97dcc32271c15 311 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 2.7E-32 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RM25_RS11185 d33f389a318c8dc027f4535e21e1e448 177 PANTHER PTHR30295:SF10 7 167 3.3E-35 T 22-04-2016 RM25_RS11185 d33f389a318c8dc027f4535e21e1e448 177 Gene3D G3DSA:1.20.1260.10 27 170 1.1E-44 T 22-04-2016 IPR012347 Ferritin-related RM25_RS11185 d33f389a318c8dc027f4535e21e1e448 177 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 78 94 1.2E-9 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RM25_RS11185 d33f389a318c8dc027f4535e21e1e448 177 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 149 167 1.2E-9 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RM25_RS11185 d33f389a318c8dc027f4535e21e1e448 177 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 54 70 1.2E-9 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RM25_RS11185 d33f389a318c8dc027f4535e21e1e448 177 PIRSF PIRSF005900 12 176 2.8E-38 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RM25_RS11185 d33f389a318c8dc027f4535e21e1e448 177 ProSitePatterns PS00818 Dps protein family signature 1. 54 70 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RM25_RS11185 d33f389a318c8dc027f4535e21e1e448 177 PANTHER PTHR30295 7 167 3.3E-35 T 22-04-2016 RM25_RS11185 d33f389a318c8dc027f4535e21e1e448 177 Pfam PF00210 Ferritin-like domain 35 169 2.7E-19 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RM25_RS11185 d33f389a318c8dc027f4535e21e1e448 177 SUPERFAMILY SSF47240 22 169 5.86E-45 T 22-04-2016 IPR009078 Ferritin-like superfamily RM25_RS01180 6f42685eb7ef727140d04ca550a02f93 248 Gene3D G3DSA:3.40.50.300 1 227 1.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01180 6f42685eb7ef727140d04ca550a02f93 248 Pfam PF00005 ABC transporter 12 159 2.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS01180 6f42685eb7ef727140d04ca550a02f93 248 SUPERFAMILY SSF52540 2 222 4.24E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01180 6f42685eb7ef727140d04ca550a02f93 248 SMART SM00382 20 208 1.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS01180 6f42685eb7ef727140d04ca550a02f93 248 PANTHER PTHR24220:SF438 1 248 1.7E-142 T 22-04-2016 RM25_RS01180 6f42685eb7ef727140d04ca550a02f93 248 PANTHER PTHR24220 1 248 1.7E-142 T 22-04-2016 RM25_RS02875 e814adc5854c641ea2994b34c89259bc 173 SUPERFAMILY SSF54211 49 173 1.67E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS02875 e814adc5854c641ea2994b34c89259bc 173 Pfam PF00380 Ribosomal protein S9/S16 52 173 2.1E-43 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RM25_RS02875 e814adc5854c641ea2994b34c89259bc 173 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 43 173 32.622 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid RM25_RS02875 e814adc5854c641ea2994b34c89259bc 173 PANTHER PTHR21569 49 173 6.5E-55 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RM25_RS02875 e814adc5854c641ea2994b34c89259bc 173 Gene3D G3DSA:3.30.230.10 50 173 6.3E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS02875 e814adc5854c641ea2994b34c89259bc 173 ProSitePatterns PS00360 Ribosomal protein S9 signature. 111 129 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 RM25_RS07040 e23fd5afec7ffedbe32f8b6309adda07 300 PANTHER PTHR38658:SF1 1 292 4.5E-44 T 22-04-2016 RM25_RS07040 e23fd5afec7ffedbe32f8b6309adda07 300 Pfam PF10128 Glucose-6-phosphate dehydrogenase subunit 51 292 5.6E-72 T 22-04-2016 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA RM25_RS07040 e23fd5afec7ffedbe32f8b6309adda07 300 PANTHER PTHR38658 1 292 4.5E-44 T 22-04-2016 RM25_RS07770 643fbc85d09a93dc4423064c32c5cb24 77 PANTHER PTHR34472 1 77 4.1E-12 T 22-04-2016 RM25_RS07770 643fbc85d09a93dc4423064c32c5cb24 77 PANTHER PTHR34472:SF1 1 77 4.1E-12 T 22-04-2016 RM25_RS07770 643fbc85d09a93dc4423064c32c5cb24 77 SUPERFAMILY SSF54285 1 77 5.56E-12 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RM25_RS07770 643fbc85d09a93dc4423064c32c5cb24 77 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 77 5.8E-17 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis RM25_RS07770 643fbc85d09a93dc4423064c32c5cb24 77 Pfam PF02597 ThiS family 4 77 1.5E-10 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RM25_RS07770 643fbc85d09a93dc4423064c32c5cb24 77 Gene3D G3DSA:3.10.20.30 1 77 4.8E-21 T 22-04-2016 IPR012675 Beta-grasp domain RM25_RS03895 e7923cb62cde6feb3b167e6d540317c4 264 Gene3D G3DSA:3.40.30.10 91 256 4.2E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS03895 e7923cb62cde6feb3b167e6d540317c4 264 PANTHER PTHR13887 15 244 9.8E-17 T 22-04-2016 RM25_RS03895 e7923cb62cde6feb3b167e6d540317c4 264 Pfam PF13462 Thioredoxin 94 249 1.9E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS03895 e7923cb62cde6feb3b167e6d540317c4 264 SUPERFAMILY SSF52833 93 245 2.69E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS11150 c838f68430d441662877e19768fd386b 384 PANTHER PTHR12468 47 178 1.3E-13 T 22-04-2016 IPR007315 GPI mannosyltransferase 2 GO:0004584|GO:0006506 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.-|UniPathway: UPA00196 RM25_RS11150 c838f68430d441662877e19768fd386b 384 Pfam PF04188 Mannosyltransferase (PIG-V) 49 178 5.5E-8 T 22-04-2016 IPR007315 GPI mannosyltransferase 2 GO:0004584|GO:0006506 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.-|UniPathway: UPA00196 RM25_RS11150 c838f68430d441662877e19768fd386b 384 PANTHER PTHR12468:SF2 47 178 1.3E-13 T 22-04-2016 RM25_RS03140 61c585189e84f5648e53e2006692c366 417 Gene3D G3DSA:3.30.870.10 58 213 3.4E-36 T 22-04-2016 RM25_RS03140 61c585189e84f5648e53e2006692c366 417 SUPERFAMILY SSF56024 224 401 2.11E-43 T 22-04-2016 RM25_RS03140 61c585189e84f5648e53e2006692c366 417 PANTHER PTHR21248 62 409 1.2E-85 T 22-04-2016 RM25_RS03140 61c585189e84f5648e53e2006692c366 417 Pfam PF13091 PLD-like domain 258 382 1.7E-27 T 22-04-2016 IPR025202 Phospholipase D-like domain RM25_RS03140 61c585189e84f5648e53e2006692c366 417 Pfam PF13091 PLD-like domain 74 209 1.2E-12 T 22-04-2016 IPR025202 Phospholipase D-like domain RM25_RS03140 61c585189e84f5648e53e2006692c366 417 PANTHER PTHR21248:SF5 62 409 1.2E-85 T 22-04-2016 RM25_RS03140 61c585189e84f5648e53e2006692c366 417 SMART SM00155 330 357 15.0 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RM25_RS03140 61c585189e84f5648e53e2006692c366 417 SMART SM00155 155 182 0.0036 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RM25_RS03140 61c585189e84f5648e53e2006692c366 417 Gene3D G3DSA:3.30.870.10 253 393 1.8E-34 T 22-04-2016 RM25_RS03140 61c585189e84f5648e53e2006692c366 417 SUPERFAMILY SSF56024 57 213 3.66E-39 T 22-04-2016 RM25_RS09715 e5df8848125df61706c286d1d4aeb5a3 110 TIGRFAM TIGR03816 tadE_like_DECH: helicase/secretion neighborhood TadE-like protein 1 106 1.0E-18 T 22-04-2016 IPR021202 Helicase/secretion neighbourhood TadE-like protein RM25_RS03630 84172cfbfc6fd18a640e3bb3d7b5e99c 230 SMART SM01007 20 200 5.5E-55 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RM25_RS03630 84172cfbfc6fd18a640e3bb3d7b5e99c 230 PANTHER PTHR22789 7 229 1.8E-66 T 22-04-2016 RM25_RS03630 84172cfbfc6fd18a640e3bb3d7b5e99c 230 SUPERFAMILY SSF53639 13 229 1.37E-59 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RM25_RS03630 84172cfbfc6fd18a640e3bb3d7b5e99c 230 PANTHER PTHR22789:SF2 7 229 1.8E-66 T 22-04-2016 RM25_RS03630 84172cfbfc6fd18a640e3bb3d7b5e99c 230 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 22 199 1.5E-44 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RM25_RS03630 84172cfbfc6fd18a640e3bb3d7b5e99c 230 Gene3D G3DSA:3.40.225.10 16 229 9.9E-66 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RM25_RS07780 75e0d70be8ce01208165c0ddced6093c 215 PANTHER PTHR20857 5 215 5.0E-57 T 22-04-2016 RM25_RS07780 75e0d70be8ce01208165c0ddced6093c 215 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 15 215 22.041 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS07780 75e0d70be8ce01208165c0ddced6093c 215 Gene3D G3DSA:3.20.20.70 15 214 7.3E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS07780 75e0d70be8ce01208165c0ddced6093c 215 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 17 211 6.8E-58 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS07780 75e0d70be8ce01208165c0ddced6093c 215 Pfam PF02581 Thiamine monophosphate synthase/TENI 18 198 1.8E-50 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS07780 75e0d70be8ce01208165c0ddced6093c 215 SUPERFAMILY SSF51391 14 212 1.15E-60 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 110 124 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 Pfam PF14821 Threonine synthase N terminus 2 85 7.3E-23 T 22-04-2016 IPR029144 Threonine synthase, N-terminal RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 Gene3D G3DSA:3.90.1380.10 2 89 2.5E-23 T 22-04-2016 IPR029144 Threonine synthase, N-terminal RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 Gene3D G3DSA:3.40.50.1100 212 448 3.7E-86 T 22-04-2016 RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 SUPERFAMILY SSF53686 2 474 7.87E-136 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 PANTHER PTHR10314 376 480 5.9E-117 T 22-04-2016 RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 PANTHER PTHR10314 59 341 5.9E-117 T 22-04-2016 RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 PANTHER PTHR10314 27 38 5.9E-117 T 22-04-2016 RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 103 421 4.5E-13 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 Gene3D G3DSA:3.40.50.1100 119 211 2.0E-6 T 22-04-2016 RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 PANTHER PTHR10314:SF1 376 480 5.9E-117 T 22-04-2016 RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 PANTHER PTHR10314:SF1 59 341 5.9E-117 T 22-04-2016 RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 PANTHER PTHR10314:SF1 27 38 5.9E-117 T 22-04-2016 RM25_RS03875 92790b3abdc6fc052f150eb96babd6ad 480 TIGRFAM TIGR00260 thrC: threonine synthase 75 439 5.6E-69 T 22-04-2016 IPR004450 Threonine synthase-like RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 Pfam PF00570 HRDC domain 616 682 1.8E-19 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 Gene3D G3DSA:3.40.50.300 8 144 1.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 Gene3D G3DSA:3.40.50.300 176 279 1.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 Gene3D G3DSA:1.10.150.80 612 682 1.6E-13 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 81 3.8E-19 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 Pfam PF00580 UvrD/REP helicase N-terminal domain 137 274 1.5E-23 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 PANTHER PTHR11070:SF21 4 564 2.2E-176 T 22-04-2016 RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 PANTHER PTHR11070 4 564 2.2E-176 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 Pfam PF13361 UvrD-like helicase C-terminal domain 281 401 2.2E-12 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 Pfam PF13361 UvrD-like helicase C-terminal domain 475 545 1.5E-22 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 SUPERFAMILY SSF47819 612 685 3.05E-19 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 SMART SM00341 612 692 1.7E-9 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 Gene3D G3DSA:3.40.50.300 482 563 1.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 Gene3D G3DSA:3.40.50.300 284 398 1.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05845 02bc8b577da9ff403bc54589ff3ceb7e 702 SUPERFAMILY SSF52540 4 566 4.32E-114 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00465 2a742a5899033da97eb965a4bc2809f6 1084 Gene3D G3DSA:3.40.50.300 918 1063 1.1E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00465 2a742a5899033da97eb965a4bc2809f6 1084 SMART SM00487 620 818 6.3E-24 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS00465 2a742a5899033da97eb965a4bc2809f6 1084 Pfam PF00271 Helicase conserved C-terminal domain 920 1029 2.5E-14 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS00465 2a742a5899033da97eb965a4bc2809f6 1084 SUPERFAMILY SSF52540 610 838 7.87E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00465 2a742a5899033da97eb965a4bc2809f6 1084 SMART SM00490 949 1029 3.7E-18 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS00465 2a742a5899033da97eb965a4bc2809f6 1084 SUPERFAMILY SSF52540 839 1083 5.32E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00465 2a742a5899033da97eb965a4bc2809f6 1084 PANTHER PTHR10799 590 1065 5.2E-157 T 22-04-2016 RM25_RS00465 2a742a5899033da97eb965a4bc2809f6 1084 Pfam PF00176 SNF2 family N-terminal domain 642 907 1.9E-56 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 RM25_RS00465 2a742a5899033da97eb965a4bc2809f6 1084 Gene3D G3DSA:3.40.50.300 619 793 1.7E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01910 98dde30088ae3c721331e34254972205 154 Gene3D G3DSA:3.90.280.10 1 151 3.2E-46 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RM25_RS01910 98dde30088ae3c721331e34254972205 154 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 21 150 2.2E-36 T 22-04-2016 IPR005247 YbhB/YbcL RM25_RS01910 98dde30088ae3c721331e34254972205 154 PANTHER PTHR30289 1 150 3.2E-46 T 22-04-2016 RM25_RS01910 98dde30088ae3c721331e34254972205 154 PANTHER PTHR30289:SF0 1 150 3.2E-46 T 22-04-2016 RM25_RS01910 98dde30088ae3c721331e34254972205 154 SUPERFAMILY SSF49777 1 150 4.71E-42 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RM25_RS01910 98dde30088ae3c721331e34254972205 154 Pfam PF01161 Phosphatidylethanolamine-binding protein 24 149 4.6E-33 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RM25_RS09965 18c06ee42a76b9f7335ad7b7086f4b05 220 PIRSF PIRSF000498 1 201 1.3E-65 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS09965 18c06ee42a76b9f7335ad7b7086f4b05 220 SUPERFAMILY SSF63380 1 91 2.13E-22 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RM25_RS09965 18c06ee42a76b9f7335ad7b7086f4b05 220 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 5.3E-58 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS09965 18c06ee42a76b9f7335ad7b7086f4b05 220 Gene3D G3DSA:2.40.30.20 5 105 5.0E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS09965 18c06ee42a76b9f7335ad7b7086f4b05 220 Gene3D G3DSA:2.40.30.20 106 196 5.6E-26 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RM25_RS09965 18c06ee42a76b9f7335ad7b7086f4b05 220 SUPERFAMILY SSF63380 94 196 1.7E-28 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RM25_RS09965 18c06ee42a76b9f7335ad7b7086f4b05 220 Pfam PF00677 Lumazine binding domain 101 185 5.1E-19 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS09965 18c06ee42a76b9f7335ad7b7086f4b05 220 Pfam PF00677 Lumazine binding domain 3 88 2.9E-22 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS09965 18c06ee42a76b9f7335ad7b7086f4b05 220 PANTHER PTHR21098 1 197 1.5E-90 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RM25_RS03255 dd9973dbf4701325706d047770369db5 135 PANTHER PTHR33570:SF4 6 132 2.8E-35 T 22-04-2016 RM25_RS03255 dd9973dbf4701325706d047770369db5 135 PANTHER PTHR33570 6 132 2.8E-35 T 22-04-2016 RM25_RS03255 dd9973dbf4701325706d047770369db5 135 Pfam PF02627 Carboxymuconolactone decarboxylase family 38 122 1.5E-16 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RM25_RS03255 dd9973dbf4701325706d047770369db5 135 SUPERFAMILY SSF69118 5 131 1.38E-32 T 22-04-2016 IPR029032 AhpD-like RM25_RS03255 dd9973dbf4701325706d047770369db5 135 Gene3D G3DSA:1.20.1290.10 7 129 1.0E-32 T 22-04-2016 IPR029032 AhpD-like RM25_RS06100 60bcf1954a6f072db8f04a1ad7065d1f 324 Gene3D G3DSA:3.40.50.410 91 286 2.8E-24 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS06100 60bcf1954a6f072db8f04a1ad7065d1f 324 SUPERFAMILY SSF53300 83 285 8.6E-29 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS06100 60bcf1954a6f072db8f04a1ad7065d1f 324 SMART SM00327 94 281 4.7E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS06100 60bcf1954a6f072db8f04a1ad7065d1f 324 Pfam PF13519 von Willebrand factor type A domain 97 207 3.1E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A RM25_RS06100 60bcf1954a6f072db8f04a1ad7065d1f 324 PANTHER PTHR22550:SF8 14 282 5.8E-19 T 22-04-2016 RM25_RS06100 60bcf1954a6f072db8f04a1ad7065d1f 324 PANTHER PTHR22550 14 282 5.8E-19 T 22-04-2016 RM25_RS07975 08db8f0f94180a2740e818d70eaf26a5 476 PANTHER PTHR21716 54 415 3.1E-53 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RM25_RS07975 08db8f0f94180a2740e818d70eaf26a5 476 Pfam PF01594 Domain of unknown function DUF20 65 388 6.5E-47 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RM25_RS00810 4992bb5869815e30d9d5b7e1a3b7a8b0 272 Gene3D G3DSA:3.40.192.10 2 104 1.9E-26 T 22-04-2016 RM25_RS00810 4992bb5869815e30d9d5b7e1a3b7a8b0 272 SUPERFAMILY SSF53223 2 93 4.03E-18 T 22-04-2016 RM25_RS00810 4992bb5869815e30d9d5b7e1a3b7a8b0 272 PANTHER PTHR21089:SF1 2 272 8.9E-51 T 22-04-2016 RM25_RS00810 4992bb5869815e30d9d5b7e1a3b7a8b0 272 Gene3D G3DSA:3.40.50.720 105 269 4.2E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00810 4992bb5869815e30d9d5b7e1a3b7a8b0 272 SUPERFAMILY SSF51735 100 265 4.82E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00810 4992bb5869815e30d9d5b7e1a3b7a8b0 272 PANTHER PTHR21089 2 272 8.9E-51 T 22-04-2016 RM25_RS00810 4992bb5869815e30d9d5b7e1a3b7a8b0 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 88 2.8E-18 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RM25_RS03520 b66f31345978d105c607a103ffc5a9ec 410 Pfam PF00501 AMP-binding enzyme 63 302 5.6E-28 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RM25_RS03520 b66f31345978d105c607a103ffc5a9ec 410 Gene3D G3DSA:3.30.300.30 297 397 8.4E-21 T 22-04-2016 RM25_RS03520 b66f31345978d105c607a103ffc5a9ec 410 Gene3D G3DSA:2.30.38.10 227 295 3.5E-8 T 22-04-2016 RM25_RS03520 b66f31345978d105c607a103ffc5a9ec 410 PANTHER PTHR24096 63 403 5.2E-38 T 22-04-2016 RM25_RS03520 b66f31345978d105c607a103ffc5a9ec 410 PANTHER PTHR24096:SF179 63 403 5.2E-38 T 22-04-2016 RM25_RS03520 b66f31345978d105c607a103ffc5a9ec 410 Gene3D G3DSA:3.40.50.980 64 225 3.6E-15 T 22-04-2016 RM25_RS03520 b66f31345978d105c607a103ffc5a9ec 410 Pfam PF13193 AMP-binding enzyme C-terminal domain 312 387 2.8E-13 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RM25_RS03520 b66f31345978d105c607a103ffc5a9ec 410 SUPERFAMILY SSF56801 47 400 8.37E-59 T 22-04-2016 RM25_RS11390 7d2df65b477d3d8fb2358a8f4ffde21e 284 SUPERFAMILY SSF51430 7 269 5.11E-77 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS11390 7d2df65b477d3d8fb2358a8f4ffde21e 284 Pfam PF00248 Aldo/keto reductase family 17 267 1.1E-42 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS11390 7d2df65b477d3d8fb2358a8f4ffde21e 284 Gene3D G3DSA:3.20.20.100 5 271 1.3E-85 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS11390 7d2df65b477d3d8fb2358a8f4ffde21e 284 PANTHER PTHR11732 3 269 3.8E-105 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RM25_RS11390 7d2df65b477d3d8fb2358a8f4ffde21e 284 PIRSF PIRSF000097 1 280 5.2E-67 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS11390 7d2df65b477d3d8fb2358a8f4ffde21e 284 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.4E-35 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS11390 7d2df65b477d3d8fb2358a8f4ffde21e 284 PRINTS PR00069 Aldo-keto reductase signature 133 150 1.4E-35 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS11390 7d2df65b477d3d8fb2358a8f4ffde21e 284 PRINTS PR00069 Aldo-keto reductase signature 167 196 1.4E-35 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS11390 7d2df65b477d3d8fb2358a8f4ffde21e 284 PRINTS PR00069 Aldo-keto reductase signature 93 111 1.4E-35 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS11390 7d2df65b477d3d8fb2358a8f4ffde21e 284 PRINTS PR00069 Aldo-keto reductase signature 204 228 1.4E-35 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS11390 7d2df65b477d3d8fb2358a8f4ffde21e 284 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 133 150 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RM25_RS06200 0566f1ff97841e7173654a751f0f5525 335 PANTHER PTHR30477:SF0 1 292 2.7E-74 T 22-04-2016 RM25_RS06200 0566f1ff97841e7173654a751f0f5525 335 PANTHER PTHR30477 1 292 2.7E-74 T 22-04-2016 RM25_RS06200 0566f1ff97841e7173654a751f0f5525 335 Gene3D G3DSA:1.10.3470.10 46 233 3.8E-6 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RM25_RS06200 0566f1ff97841e7173654a751f0f5525 335 SUPERFAMILY SSF81345 3 256 1.12E-28 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RM25_RS06200 0566f1ff97841e7173654a751f0f5525 335 Pfam PF00950 ABC 3 transport family 7 258 1.4E-55 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 RM25_RS01640 2730a08d0620786ad589d94fd9df5d83 249 PANTHER PTHR24094:SF10 8 248 3.1E-54 T 22-04-2016 RM25_RS01640 2730a08d0620786ad589d94fd9df5d83 249 PANTHER PTHR24094 8 248 3.1E-54 T 22-04-2016 RM25_RS01640 2730a08d0620786ad589d94fd9df5d83 249 Pfam PF07510 Protein of unknown function (DUF1524) 105 242 3.7E-19 T 22-04-2016 IPR011089 Domain of unknown function DUF1524 RM25_RS01955 78c05babc7340c2e98d5d1a12525447f 443 Gene3D G3DSA:3.40.50.1820 85 97 1.2E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS01955 78c05babc7340c2e98d5d1a12525447f 443 Gene3D G3DSA:3.40.50.1820 129 233 1.2E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS01955 78c05babc7340c2e98d5d1a12525447f 443 Gene3D G3DSA:3.40.50.1820 298 349 1.2E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS01955 78c05babc7340c2e98d5d1a12525447f 443 SUPERFAMILY SSF53474 82 99 1.7E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS01955 78c05babc7340c2e98d5d1a12525447f 443 SUPERFAMILY SSF53474 130 343 1.7E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS01955 78c05babc7340c2e98d5d1a12525447f 443 Pfam PF02450 Lecithin:cholesterol acyltransferase 168 230 4.6E-6 T 22-04-2016 IPR003386 Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase GO:0006629|GO:0008374 RM25_RS10210 6b493e68b0b568854a775a2eae806e72 123 SUPERFAMILY SSF55298 6 119 6.75E-28 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RM25_RS10210 6b493e68b0b568854a775a2eae806e72 123 PANTHER PTHR11803 8 118 6.5E-31 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RM25_RS10210 6b493e68b0b568854a775a2eae806e72 123 Gene3D G3DSA:3.30.1330.40 5 119 8.4E-28 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RM25_RS10210 6b493e68b0b568854a775a2eae806e72 123 Pfam PF01042 Endoribonuclease L-PSP 7 117 9.6E-22 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RM25_RS04655 4b602694721f3fd4716fcf761a1363eb 201 PANTHER PTHR23089 4 199 1.7E-72 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RM25_RS04655 4b602694721f3fd4716fcf761a1363eb 201 Pfam PF01230 HIT domain 68 156 5.3E-12 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RM25_RS04655 4b602694721f3fd4716fcf761a1363eb 201 SUPERFAMILY SSF54197 27 181 2.17E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RM25_RS04655 4b602694721f3fd4716fcf761a1363eb 201 PANTHER PTHR23089:SF16 4 199 1.7E-72 T 22-04-2016 RM25_RS04655 4b602694721f3fd4716fcf761a1363eb 201 Gene3D G3DSA:3.30.428.10 51 188 5.2E-34 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RM25_RS01470 020e2892dfc6444849a173a31d7f00b0 421 PANTHER PTHR24220:SF549 18 276 1.1E-123 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 RM25_RS01470 020e2892dfc6444849a173a31d7f00b0 421 Pfam PF00005 ABC transporter 36 184 9.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS01470 020e2892dfc6444849a173a31d7f00b0 421 Gene3D G3DSA:3.40.50.300 17 252 1.5E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01470 020e2892dfc6444849a173a31d7f00b0 421 PANTHER PTHR24220 18 276 1.1E-123 T 22-04-2016 RM25_RS01470 020e2892dfc6444849a173a31d7f00b0 421 Pfam PF09383 NIL domain 304 345 4.8E-5 T 22-04-2016 IPR018449 NIL domain RM25_RS01470 020e2892dfc6444849a173a31d7f00b0 421 SMART SM00382 45 233 7.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS01470 020e2892dfc6444849a173a31d7f00b0 421 SUPERFAMILY SSF52540 17 255 8.7E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01470 020e2892dfc6444849a173a31d7f00b0 421 Gene3D G3DSA:3.30.70.260 253 347 1.1E-7 T 22-04-2016 RM25_RS01470 020e2892dfc6444849a173a31d7f00b0 421 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS05290 f3f269edc2d16fe0184875bd0b367077 154 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 11 143 2.0E-60 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RM25_RS05290 f3f269edc2d16fe0184875bd0b367077 154 Gene3D G3DSA:3.30.1360.80 6 152 4.7E-61 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RM25_RS05290 f3f269edc2d16fe0184875bd0b367077 154 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 4 154 33.699 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RM25_RS05290 f3f269edc2d16fe0184875bd0b367077 154 PANTHER PTHR35799 5 153 4.9E-70 T 22-04-2016 RM25_RS05290 f3f269edc2d16fe0184875bd0b367077 154 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 6 150 2.3E-54 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RM25_RS05290 f3f269edc2d16fe0184875bd0b367077 154 SUPERFAMILY SSF63411 4 152 6.5E-59 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RM25_RS05290 f3f269edc2d16fe0184875bd0b367077 154 PIRSF PIRSF006160 4 154 1.4E-60 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RM25_RS05290 f3f269edc2d16fe0184875bd0b367077 154 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 8 26 4.5E-42 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RM25_RS05290 f3f269edc2d16fe0184875bd0b367077 154 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 52 70 4.5E-42 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RM25_RS05290 f3f269edc2d16fe0184875bd0b367077 154 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 117 136 4.5E-42 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RM25_RS05290 f3f269edc2d16fe0184875bd0b367077 154 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 76 94 4.5E-42 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RM25_RS05290 f3f269edc2d16fe0184875bd0b367077 154 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 31 49 4.5E-42 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RM25_RS01360 7d500f38856f6fc1f7fe38f821ea2b8a 217 PANTHER PTHR18901 9 217 8.8E-39 T 22-04-2016 RM25_RS01360 7d500f38856f6fc1f7fe38f821ea2b8a 217 SUPERFAMILY SSF56784 7 215 1.73E-45 T 22-04-2016 IPR023214 HAD-like domain RM25_RS01360 7d500f38856f6fc1f7fe38f821ea2b8a 217 Gene3D G3DSA:3.40.50.1000 9 26 5.7E-30 T 22-04-2016 IPR023214 HAD-like domain RM25_RS01360 7d500f38856f6fc1f7fe38f821ea2b8a 217 Gene3D G3DSA:3.40.50.1000 81 213 5.7E-30 T 22-04-2016 IPR023214 HAD-like domain RM25_RS01360 7d500f38856f6fc1f7fe38f821ea2b8a 217 PANTHER PTHR18901:SF14 9 217 8.8E-39 T 22-04-2016 RM25_RS01360 7d500f38856f6fc1f7fe38f821ea2b8a 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 72 180 2.8E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RM25_RS01360 7d500f38856f6fc1f7fe38f821ea2b8a 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 186 1.1E-35 T 22-04-2016 IPR023214 HAD-like domain RM25_RS01360 7d500f38856f6fc1f7fe38f821ea2b8a 217 Gene3D G3DSA:1.10.150.240 27 72 3.1E-4 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RM25_RS07140 8dc6ea4aa869efd80b800ec1fda1801b 197 Gene3D G3DSA:3.60.15.10 7 195 3.9E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS07140 8dc6ea4aa869efd80b800ec1fda1801b 197 Pfam PF00753 Metallo-beta-lactamase superfamily 13 173 1.0E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS07140 8dc6ea4aa869efd80b800ec1fda1801b 197 PANTHER PTHR11935:SF89 7 195 7.7E-54 T 22-04-2016 RM25_RS07140 8dc6ea4aa869efd80b800ec1fda1801b 197 PANTHER PTHR11935 7 195 7.7E-54 T 22-04-2016 RM25_RS07140 8dc6ea4aa869efd80b800ec1fda1801b 197 SMART SM00849 12 176 8.1E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS07140 8dc6ea4aa869efd80b800ec1fda1801b 197 SUPERFAMILY SSF56281 5 193 1.04E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase RM25_RS05660 48c9766c0838dd0dda62a559978f430a 465 Pfam PF09594 Protein of unknown function (DUF2029) 105 333 3.2E-7 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RM25_RS11580 305e66e3c6e61fbc5f345e2d5636a5b6 148 Pfam PF02566 OsmC-like protein 39 135 1.6E-11 T 22-04-2016 IPR003718 OsmC/Ohr family RM25_RS11580 305e66e3c6e61fbc5f345e2d5636a5b6 148 Gene3D G3DSA:3.30.300.20 43 137 7.0E-15 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RM25_RS11580 305e66e3c6e61fbc5f345e2d5636a5b6 148 SUPERFAMILY SSF82784 13 137 8.64E-18 T 22-04-2016 IPR003718 OsmC/Ohr family RM25_RS00225 267ec960e018dbc8d0e20f30e485a6d0 378 PANTHER PTHR30582:SF2 43 376 5.3E-61 T 22-04-2016 RM25_RS00225 267ec960e018dbc8d0e20f30e485a6d0 378 PANTHER PTHR30582 43 376 5.3E-61 T 22-04-2016 RM25_RS00225 267ec960e018dbc8d0e20f30e485a6d0 378 Pfam PF03734 L,D-transpeptidase catalytic domain 227 346 9.6E-16 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 RM25_RS00225 267ec960e018dbc8d0e20f30e485a6d0 378 Gene3D G3DSA:2.40.440.10 225 348 3.6E-17 T 22-04-2016 RM25_RS00225 267ec960e018dbc8d0e20f30e485a6d0 378 SUPERFAMILY SSF141523 224 347 1.57E-26 T 22-04-2016 RM25_RS10465 c955d5d104307cbb287cd4520fce163c 594 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 5 538 2.0E-202 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 RM25_RS10465 c955d5d104307cbb287cd4520fce163c 594 SUPERFAMILY SSF53067 5 280 5.18E-33 T 22-04-2016 RM25_RS10465 c955d5d104307cbb287cd4520fce163c 594 PANTHER PTHR10196:SF59 1 548 3.8E-174 T 22-04-2016 RM25_RS10465 c955d5d104307cbb287cd4520fce163c 594 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 290 487 1.1E-37 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RM25_RS10465 c955d5d104307cbb287cd4520fce163c 594 Gene3D G3DSA:3.30.420.40 283 529 2.7E-51 T 22-04-2016 RM25_RS10465 c955d5d104307cbb287cd4520fce163c 594 Gene3D G3DSA:3.30.420.40 2 277 1.4E-37 T 22-04-2016 RM25_RS10465 c955d5d104307cbb287cd4520fce163c 594 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 277 2.8E-13 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RM25_RS10465 c955d5d104307cbb287cd4520fce163c 594 PANTHER PTHR10196 1 548 3.8E-174 T 22-04-2016 RM25_RS10465 c955d5d104307cbb287cd4520fce163c 594 SUPERFAMILY SSF53067 283 533 5.0E-53 T 22-04-2016 RM25_RS05010 9d0a06a829d9be1f61ea8050bf92f7ae 345 SUPERFAMILY SSF55729 20 122 6.03E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS05010 9d0a06a829d9be1f61ea8050bf92f7ae 345 SUPERFAMILY SSF55729 153 335 1.54E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS05010 9d0a06a829d9be1f61ea8050bf92f7ae 345 Gene3D G3DSA:3.40.630.30 22 121 9.6E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS05010 9d0a06a829d9be1f61ea8050bf92f7ae 345 Gene3D G3DSA:3.40.630.30 183 332 4.9E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS05010 9d0a06a829d9be1f61ea8050bf92f7ae 345 Pfam PF00583 Acetyltransferase (GNAT) family 250 327 4.1E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS00890 e91123a6fde41e046c7ea5fed346d6fd 538 Pfam PF00664 ABC transporter transmembrane region 23 274 4.4E-22 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS00890 e91123a6fde41e046c7ea5fed346d6fd 538 SUPERFAMILY SSF90123 6 316 4.19E-46 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RM25_RS00890 e91123a6fde41e046c7ea5fed346d6fd 538 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 17 538 1.4E-175 T 22-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 RM25_RS00890 e91123a6fde41e046c7ea5fed346d6fd 538 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS00890 e91123a6fde41e046c7ea5fed346d6fd 538 SMART SM00382 361 538 3.1E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS00890 e91123a6fde41e046c7ea5fed346d6fd 538 Gene3D G3DSA:1.20.1560.10 8 324 5.2E-40 T 22-04-2016 RM25_RS00890 e91123a6fde41e046c7ea5fed346d6fd 538 PANTHER PTHR24221:SF161 8 537 4.3E-111 T 22-04-2016 RM25_RS00890 e91123a6fde41e046c7ea5fed346d6fd 538 Pfam PF00005 ABC transporter 354 499 1.9E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS00890 e91123a6fde41e046c7ea5fed346d6fd 538 SUPERFAMILY SSF52540 327 537 3.39E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00890 e91123a6fde41e046c7ea5fed346d6fd 538 Gene3D G3DSA:3.40.50.300 334 537 2.2E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00890 e91123a6fde41e046c7ea5fed346d6fd 538 PANTHER PTHR24221 8 537 4.3E-111 T 22-04-2016 RM25_RS01000 f4be37abcc6faf2ab407eb13b75ff4a2 547 Pfam PF00005 ABC transporter 19 168 6.1E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS01000 f4be37abcc6faf2ab407eb13b75ff4a2 547 Pfam PF00005 ABC transporter 358 490 2.1E-13 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS01000 f4be37abcc6faf2ab407eb13b75ff4a2 547 Gene3D G3DSA:3.40.50.300 354 542 5.3E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01000 f4be37abcc6faf2ab407eb13b75ff4a2 547 SMART SM00382 25 215 8.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS01000 f4be37abcc6faf2ab407eb13b75ff4a2 547 SMART SM00382 360 536 2.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS01000 f4be37abcc6faf2ab407eb13b75ff4a2 547 Gene3D G3DSA:3.40.50.300 3 269 6.2E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01000 f4be37abcc6faf2ab407eb13b75ff4a2 547 SUPERFAMILY SSF52540 13 208 7.0E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01000 f4be37abcc6faf2ab407eb13b75ff4a2 547 PANTHER PTHR19211 283 518 1.4E-131 T 22-04-2016 RM25_RS01000 f4be37abcc6faf2ab407eb13b75ff4a2 547 SUPERFAMILY SSF52540 355 536 3.12E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS01000 f4be37abcc6faf2ab407eb13b75ff4a2 547 PANTHER PTHR19211 1 257 1.4E-131 T 22-04-2016 RM25_RS01000 f4be37abcc6faf2ab407eb13b75ff4a2 547 PANTHER PTHR19211:SF6 1 257 1.4E-131 T 22-04-2016 RM25_RS01000 f4be37abcc6faf2ab407eb13b75ff4a2 547 PANTHER PTHR19211:SF6 283 518 1.4E-131 T 22-04-2016 RM25_RS08270 e5e28db89511c34bec7e9158224cb7c9 144 Pfam PF01047 MarR family 36 84 2.4E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS08270 e5e28db89511c34bec7e9158224cb7c9 144 PANTHER PTHR33164 16 144 5.6E-37 T 22-04-2016 RM25_RS08270 e5e28db89511c34bec7e9158224cb7c9 144 PANTHER PTHR33164:SF9 16 144 5.6E-37 T 22-04-2016 RM25_RS08270 e5e28db89511c34bec7e9158224cb7c9 144 SUPERFAMILY SSF46785 7 143 3.35E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS08270 e5e28db89511c34bec7e9158224cb7c9 144 SMART SM00347 29 129 6.9E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS08270 e5e28db89511c34bec7e9158224cb7c9 144 Gene3D G3DSA:1.10.10.10 3 143 1.1E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS09305 e16b227d534e2a926d3e1a297131ae39 358 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 173 298 2.7E-13 T 22-04-2016 IPR026466 Fimbrial isopeptide formation D2 domain RM25_RS03345 2a149a07506c88ae756b5f564cd371f9 425 PANTHER PTHR34390 1 99 1.6E-19 T 22-04-2016 RM25_RS03345 2a149a07506c88ae756b5f564cd371f9 425 PANTHER PTHR34390 245 410 1.6E-19 T 22-04-2016 RM25_RS03345 2a149a07506c88ae756b5f564cd371f9 425 Pfam PF06738 Putative threonine/serine exporter 1 238 3.4E-52 T 22-04-2016 IPR010619 Putative threonine/serine exporter RM25_RS03345 2a149a07506c88ae756b5f564cd371f9 425 Pfam PF12821 Threonine/Serine exporter, ThrE 262 386 9.2E-23 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE RM25_RS03315 16b6b25aef8164242e51c19d392b5e16 271 PANTHER PTHR22993 1 271 6.2E-49 T 22-04-2016 RM25_RS03315 16b6b25aef8164242e51c19d392b5e16 271 SMART SM01232 123 215 3.4E-25 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RM25_RS03315 16b6b25aef8164242e51c19d392b5e16 271 SUPERFAMILY SSF81624 2 124 7.06E-19 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RM25_RS03315 16b6b25aef8164242e51c19d392b5e16 271 SUPERFAMILY SSF57716 223 268 2.22E-12 T 22-04-2016 RM25_RS03315 16b6b25aef8164242e51c19d392b5e16 271 SMART SM00898 2 109 9.7E-16 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RM25_RS03315 16b6b25aef8164242e51c19d392b5e16 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 123 205 6.5E-20 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RM25_RS03315 16b6b25aef8164242e51c19d392b5e16 271 Gene3D G3DSA:1.10.8.50 124 269 1.1E-41 T 22-04-2016 RM25_RS03315 16b6b25aef8164242e51c19d392b5e16 271 SUPERFAMILY SSF46946 122 205 2.36E-22 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RM25_RS03315 16b6b25aef8164242e51c19d392b5e16 271 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 2.7E-7 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RM25_RS03315 16b6b25aef8164242e51c19d392b5e16 271 Gene3D G3DSA:3.20.190.10 2 123 2.6E-12 T 22-04-2016 RM25_RS07200 dbf11b06684d70d5daae556988d4d21c 306 PANTHER PTHR11079 6 306 4.6E-103 T 22-04-2016 RM25_RS07200 dbf11b06684d70d5daae556988d4d21c 306 Pfam PF00849 RNA pseudouridylate synthase 88 242 2.5E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS07200 dbf11b06684d70d5daae556988d4d21c 306 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 304 4.6E-88 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS07200 dbf11b06684d70d5daae556988d4d21c 306 SUPERFAMILY SSF55174 12 64 2.88E-8 T 22-04-2016 RM25_RS07200 dbf11b06684d70d5daae556988d4d21c 306 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS07200 dbf11b06684d70d5daae556988d4d21c 306 SUPERFAMILY SSF55120 75 304 1.1E-68 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RM25_RS07200 dbf11b06684d70d5daae556988d4d21c 306 Gene3D G3DSA:3.10.290.10 13 62 1.4E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS07200 dbf11b06684d70d5daae556988d4d21c 306 SMART SM00363 13 74 8.7E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RM25_RS07200 dbf11b06684d70d5daae556988d4d21c 306 PANTHER PTHR11079:SF73 6 306 4.6E-103 T 22-04-2016 RM25_RS06610 4feec4dac2a79ba98340f2b5bcee6ca0 128 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 22 119 9.6E-13 T 22-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis RM25_RS06610 4feec4dac2a79ba98340f2b5bcee6ca0 128 SUPERFAMILY SSF53146 14 120 9.42E-16 T 22-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis RM25_RS06610 4feec4dac2a79ba98340f2b5bcee6ca0 128 Gene3D G3DSA:3.30.420.130 14 117 9.8E-17 T 22-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis RM25_RS04995 509fbfed394b956260871541bd00fd32 202 PANTHER PTHR23133 1 202 2.6E-87 T 22-04-2016 RM25_RS04995 509fbfed394b956260871541bd00fd32 202 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 182 5.1E-55 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RM25_RS04995 509fbfed394b956260871541bd00fd32 202 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RM25_RS04995 509fbfed394b956260871541bd00fd32 202 SUPERFAMILY SSF54211 88 187 2.91E-25 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS04995 509fbfed394b956260871541bd00fd32 202 Gene3D G3DSA:3.30.230.40 91 202 6.3E-27 T 22-04-2016 RM25_RS04995 509fbfed394b956260871541bd00fd32 202 PANTHER PTHR23133:SF2 1 202 2.6E-87 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RM25_RS04995 509fbfed394b956260871541bd00fd32 202 Gene3D G3DSA:3.30.230.40 3 90 7.8E-35 T 22-04-2016 RM25_RS04995 509fbfed394b956260871541bd00fd32 202 SUPERFAMILY SSF54211 3 87 6.83E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS04995 509fbfed394b956260871541bd00fd32 202 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 164 176 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RM25_RS04995 509fbfed394b956260871541bd00fd32 202 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 202 40.484 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RM25_RS02175 31bd06cff8f0bc6537312e06a7a044ac 360 Pfam PF12146 Serine aminopeptidase, S33 46 175 1.7E-20 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 RM25_RS02175 31bd06cff8f0bc6537312e06a7a044ac 360 SUPERFAMILY SSF53474 40 319 1.71E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS02175 31bd06cff8f0bc6537312e06a7a044ac 360 Gene3D G3DSA:3.40.50.1820 40 171 1.2E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS02175 31bd06cff8f0bc6537312e06a7a044ac 360 Gene3D G3DSA:3.40.50.1820 240 317 1.2E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS02175 31bd06cff8f0bc6537312e06a7a044ac 360 PANTHER PTHR11614 49 340 1.6E-43 T 22-04-2016 RM25_RS02175 31bd06cff8f0bc6537312e06a7a044ac 360 PANTHER PTHR11614:SF40 49 340 1.6E-43 T 22-04-2016 RM25_RS11470 41bedf5a7766a0b1d8aa8f76e811e160 183 Gene3D G3DSA:2.40.128.110 10 182 4.2E-63 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RM25_RS11470 41bedf5a7766a0b1d8aa8f76e811e160 183 PANTHER PTHR34406:SF1 1 181 3.3E-64 T 22-04-2016 RM25_RS11470 41bedf5a7766a0b1d8aa8f76e811e160 183 SUPERFAMILY SSF101874 10 182 5.49E-60 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RM25_RS11470 41bedf5a7766a0b1d8aa8f76e811e160 183 PANTHER PTHR34406 1 181 3.3E-64 T 22-04-2016 RM25_RS11470 41bedf5a7766a0b1d8aa8f76e811e160 183 SMART SM00867 11 180 6.1E-73 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RM25_RS11470 41bedf5a7766a0b1d8aa8f76e811e160 183 Pfam PF04264 YceI-like domain 12 178 2.3E-47 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RM25_RS06250 fe10b55c589aff239d797e2c5f0f9701 114 Pfam PF02288 Dehydratase medium subunit 5 110 1.8E-30 T 22-04-2016 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor RM25_RS06250 fe10b55c589aff239d797e2c5f0f9701 114 Gene3D G3DSA:3.40.50.10150 2 113 6.0E-31 T 22-04-2016 IPR010254 B12-dependent dehydratases, beta subunit RM25_RS06250 fe10b55c589aff239d797e2c5f0f9701 114 SUPERFAMILY SSF52968 3 113 1.31E-24 T 22-04-2016 IPR010254 B12-dependent dehydratases, beta subunit RM25_RS11205 3f3ba8488a753a5a368e3cd3571b5aa9 162 PANTHER PTHR34796 1 145 1.1E-28 T 22-04-2016 RM25_RS11205 3f3ba8488a753a5a368e3cd3571b5aa9 162 Pfam PF03745 Domain of unknown function (DUF309) 47 105 9.1E-21 T 22-04-2016 IPR005500 Protein of unknown function DUF309 RM25_RS11205 3f3ba8488a753a5a368e3cd3571b5aa9 162 Gene3D G3DSA:1.10.3450.10 17 148 3.0E-25 T 22-04-2016 IPR023203 TTHA0068-like domain RM25_RS11205 3f3ba8488a753a5a368e3cd3571b5aa9 162 PANTHER PTHR34796:SF1 1 145 1.1E-28 T 22-04-2016 RM25_RS11205 3f3ba8488a753a5a368e3cd3571b5aa9 162 SUPERFAMILY SSF140663 30 152 8.89E-28 T 22-04-2016 IPR023203 TTHA0068-like domain RM25_RS11650 e687d553a44026be2472553b697ee5ad 578 Pfam PF00395 S-layer homology domain 458 501 1.7E-11 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS11650 e687d553a44026be2472553b697ee5ad 578 Pfam PF00395 S-layer homology domain 520 563 1.6E-7 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS11650 e687d553a44026be2472553b697ee5ad 578 Pfam PF00395 S-layer homology domain 398 439 6.8E-9 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS05785 8feba27459f9b63df581acc8c13e4bdd 96 Pfam PF14542 GCN5-related N-acetyl-transferase 17 92 1.4E-23 T 22-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase RM25_RS05785 8feba27459f9b63df581acc8c13e4bdd 96 SUPERFAMILY SSF55729 7 95 2.23E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS05785 8feba27459f9b63df581acc8c13e4bdd 96 Gene3D G3DSA:3.40.630.30 7 93 3.9E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS05785 8feba27459f9b63df581acc8c13e4bdd 96 PANTHER PTHR31435 9 95 4.3E-22 T 22-04-2016 RM25_RS08395 8fdcceabbad4e196d63d88e5113d43cf 442 PANTHER PTHR33498:SF1 53 441 5.3E-29 T 22-04-2016 RM25_RS08395 8fdcceabbad4e196d63d88e5113d43cf 442 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 52 95 1.3E-6 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS08395 8fdcceabbad4e196d63d88e5113d43cf 442 PANTHER PTHR33498 53 441 5.3E-29 T 22-04-2016 RM25_RS08395 8fdcceabbad4e196d63d88e5113d43cf 442 Pfam PF01610 Transposase 171 426 3.2E-64 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS04820 8fdcceabbad4e196d63d88e5113d43cf 442 PANTHER PTHR33498:SF1 53 441 5.3E-29 T 22-04-2016 RM25_RS04820 8fdcceabbad4e196d63d88e5113d43cf 442 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 52 95 1.3E-6 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RM25_RS04820 8fdcceabbad4e196d63d88e5113d43cf 442 PANTHER PTHR33498 53 441 5.3E-29 T 22-04-2016 RM25_RS04820 8fdcceabbad4e196d63d88e5113d43cf 442 Pfam PF01610 Transposase 171 426 3.2E-64 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS01935 a69743c1f240c9c5ff508eaa7fc7f010 254 Pfam PF02698 DUF218 domain 84 226 2.3E-25 T 22-04-2016 IPR003848 Domain of unknown function DUF218 RM25_RS01935 a69743c1f240c9c5ff508eaa7fc7f010 254 Gene3D G3DSA:3.40.50.620 84 207 2.4E-11 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS01935 a69743c1f240c9c5ff508eaa7fc7f010 254 PANTHER PTHR30336 84 233 9.9E-30 T 22-04-2016 RM25_RS01935 a69743c1f240c9c5ff508eaa7fc7f010 254 PANTHER PTHR30336:SF0 84 233 9.9E-30 T 22-04-2016 RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 PANTHER PTHR23501 1 467 2.4E-107 T 22-04-2016 RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 Gene3D G3DSA:1.20.1250.20 2 179 6.1E-33 T 22-04-2016 RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 Gene3D G3DSA:1.20.1250.20 449 470 3.4E-16 T 22-04-2016 RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 Gene3D G3DSA:1.20.1250.20 248 403 3.4E-16 T 22-04-2016 RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 Pfam PF07690 Major Facilitator Superfamily 4 391 6.8E-58 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 SUPERFAMILY SSF103473 448 472 1.44E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 SUPERFAMILY SSF103473 2 187 1.44E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 SUPERFAMILY SSF103473 232 402 1.44E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 PRINTS PR01036 Tetracycline resistance protein TetB signature 285 309 5.6E-9 T 22-04-2016 RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 PRINTS PR01036 Tetracycline resistance protein TetB signature 3 27 5.6E-9 T 22-04-2016 RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 PRINTS PR01036 Tetracycline resistance protein TetB signature 250 275 5.6E-9 T 22-04-2016 RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 PRINTS PR01036 Tetracycline resistance protein TetB signature 93 113 5.6E-9 T 22-04-2016 RM25_RS11070 a231ed2b5b6dae3bb8e7d7656fbda46e 478 PRINTS PR01036 Tetracycline resistance protein TetB signature 123 147 5.6E-9 T 22-04-2016 RM25_RS02665 0fdd9376b7bbc253eff8908a23715e14 123 Pfam PF00467 KOW motif 8 38 1.6E-7 T 22-04-2016 IPR005824 KOW RM25_RS02665 0fdd9376b7bbc253eff8908a23715e14 123 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 117 18.623 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02665 0fdd9376b7bbc253eff8908a23715e14 123 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 42 123 2.0E-13 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02665 0fdd9376b7bbc253eff8908a23715e14 123 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02665 0fdd9376b7bbc253eff8908a23715e14 123 SMART SM00739 5 32 1.1E-5 T 22-04-2016 IPR005824 KOW RM25_RS02665 0fdd9376b7bbc253eff8908a23715e14 123 PANTHER PTHR12903 1 123 1.6E-26 T 22-04-2016 RM25_RS02665 0fdd9376b7bbc253eff8908a23715e14 123 SUPERFAMILY SSF50104 2 96 3.65E-23 T 22-04-2016 IPR008991 Translation protein SH3-like domain RM25_RS02665 0fdd9376b7bbc253eff8908a23715e14 123 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 97 7.9E-22 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS02665 0fdd9376b7bbc253eff8908a23715e14 123 Gene3D G3DSA:2.30.30.30 2 96 1.1E-21 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RM25_RS11035 5e1b211da811ce259628d748b46b6862 65 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 34 2.9E-4 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 RM25_RS11035 5e1b211da811ce259628d748b46b6862 65 SUPERFAMILY SSF47598 2 53 3.56E-5 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RM25_RS09415 c5eec773ea0f4f96da6d8b8a919a39ef 121 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 2 119 4.7E-37 T 22-04-2016 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 RM25_RS12140 fba83c78bd23ac98bbb6e05fc5293a39 692 Gene3D G3DSA:1.10.510.10 100 169 5.0E-12 T 22-04-2016 RM25_RS12140 fba83c78bd23ac98bbb6e05fc5293a39 692 PANTHER PTHR24362 23 166 2.1E-20 T 22-04-2016 RM25_RS12140 fba83c78bd23ac98bbb6e05fc5293a39 692 PANTHER PTHR24362:SF160 23 166 2.1E-20 T 22-04-2016 RM25_RS12140 fba83c78bd23ac98bbb6e05fc5293a39 692 SUPERFAMILY SSF56112 24 208 7.97E-19 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS12140 fba83c78bd23ac98bbb6e05fc5293a39 692 SUPERFAMILY SSF49785 563 690 4.25E-6 T 22-04-2016 IPR008979 Galactose-binding domain-like RM25_RS12140 fba83c78bd23ac98bbb6e05fc5293a39 692 Gene3D G3DSA:3.30.200.20 23 99 2.2E-5 T 22-04-2016 RM25_RS12140 fba83c78bd23ac98bbb6e05fc5293a39 692 Gene3D G3DSA:2.60.120.260 552 690 3.6E-7 T 22-04-2016 IPR008979 Galactose-binding domain-like RM25_RS12140 fba83c78bd23ac98bbb6e05fc5293a39 692 SMART SM00220 30 507 0.0011 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RM25_RS05960 ad2e0dae41705051a7a4309dd23f06b1 188 Pfam PF02622 Uncharacterized ACR, COG1678 23 172 4.8E-31 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 RM25_RS05960 ad2e0dae41705051a7a4309dd23f06b1 188 PANTHER PTHR30327 7 188 1.2E-34 T 22-04-2016 RM25_RS05960 ad2e0dae41705051a7a4309dd23f06b1 188 SUPERFAMILY SSF143456 5 182 6.28E-43 T 22-04-2016 RM25_RS05960 ad2e0dae41705051a7a4309dd23f06b1 188 Gene3D G3DSA:3.40.1740.10 4 45 5.7E-22 T 22-04-2016 RM25_RS05960 ad2e0dae41705051a7a4309dd23f06b1 188 Gene3D G3DSA:3.40.1740.10 129 174 5.7E-22 T 22-04-2016 RM25_RS05960 ad2e0dae41705051a7a4309dd23f06b1 188 PANTHER PTHR30327:SF1 7 188 1.2E-34 T 22-04-2016 RM25_RS01095 a006d6af5f408f959cf5dda4a34363d9 533 Gene3D G3DSA:3.40.50.980 15 188 1.7E-33 T 22-04-2016 RM25_RS01095 a006d6af5f408f959cf5dda4a34363d9 533 SUPERFAMILY SSF56801 11 525 6.8E-125 T 22-04-2016 RM25_RS01095 a006d6af5f408f959cf5dda4a34363d9 533 Gene3D G3DSA:3.40.50.980 189 338 3.1E-25 T 22-04-2016 RM25_RS01095 a006d6af5f408f959cf5dda4a34363d9 533 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 515 8.5E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RM25_RS01095 a006d6af5f408f959cf5dda4a34363d9 533 PANTHER PTHR24096 13 524 3.0E-116 T 22-04-2016 RM25_RS01095 a006d6af5f408f959cf5dda4a34363d9 533 Gene3D G3DSA:2.30.38.10 346 422 1.2E-22 T 22-04-2016 RM25_RS01095 a006d6af5f408f959cf5dda4a34363d9 533 Gene3D G3DSA:3.30.300.30 428 525 1.0E-25 T 22-04-2016 RM25_RS01095 a006d6af5f408f959cf5dda4a34363d9 533 Pfam PF00501 AMP-binding enzyme 20 431 6.2E-73 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RM25_RS07670 d964989d0d24d1c2f01e097d98ea4e58 168 SUPERFAMILY SSF55729 5 167 2.4E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS07670 d964989d0d24d1c2f01e097d98ea4e58 168 Gene3D G3DSA:3.40.630.30 3 167 2.5E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS07670 d964989d0d24d1c2f01e097d98ea4e58 168 PANTHER PTHR23091:SF187 1 157 1.1E-48 T 22-04-2016 RM25_RS07670 d964989d0d24d1c2f01e097d98ea4e58 168 Pfam PF13420 Acetyltransferase (GNAT) domain 5 160 6.0E-17 T 22-04-2016 RM25_RS07670 d964989d0d24d1c2f01e097d98ea4e58 168 PANTHER PTHR23091 1 157 1.1E-48 T 22-04-2016 RM25_RS01745 3534ffe568379ea15068dc151fef0003 102 PANTHER PTHR33449 1 102 1.7E-25 T 22-04-2016 RM25_RS01745 3534ffe568379ea15068dc151fef0003 102 SUPERFAMILY SSF82607 8 97 2.88E-23 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RM25_RS01745 3534ffe568379ea15068dc151fef0003 102 PANTHER PTHR33449:SF1 1 102 1.7E-25 T 22-04-2016 RM25_RS01745 3534ffe568379ea15068dc151fef0003 102 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 6 98 17.4 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RM25_RS01745 3534ffe568379ea15068dc151fef0003 102 PIRSF PIRSF004555 4 100 6.5E-27 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RM25_RS01745 3534ffe568379ea15068dc151fef0003 102 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 92 3.9E-18 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RM25_RS01745 3534ffe568379ea15068dc151fef0003 102 Pfam PF02575 YbaB/EbfC DNA-binding family 13 97 5.4E-27 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RM25_RS01745 3534ffe568379ea15068dc151fef0003 102 Gene3D G3DSA:3.30.1310.10 3 97 3.1E-29 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RM25_RS03095 818fa2eaab329b5f8286d5d28c373e25 111 PANTHER PTHR33885 16 76 1.8E-13 T 22-04-2016 RM25_RS03095 818fa2eaab329b5f8286d5d28c373e25 111 Pfam PF04024 PspC domain 19 76 9.5E-18 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal RM25_RS05885 46c5a26684ad10d6e01eca98963be655 290 SUPERFAMILY SSF81606 21 273 3.01E-41 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RM25_RS05885 46c5a26684ad10d6e01eca98963be655 290 SMART SM00332 4 270 2.7E-5 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RM25_RS05885 46c5a26684ad10d6e01eca98963be655 290 SMART SM00331 35 272 1.6E-4 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RM25_RS05885 46c5a26684ad10d6e01eca98963be655 290 PANTHER PTHR13832 13 274 1.1E-18 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 RM25_RS05885 46c5a26684ad10d6e01eca98963be655 290 Gene3D G3DSA:3.60.40.10 21 272 8.3E-45 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RM25_RS05885 46c5a26684ad10d6e01eca98963be655 290 PANTHER PTHR13832:SF226 13 274 1.1E-18 T 22-04-2016 RM25_RS05885 46c5a26684ad10d6e01eca98963be655 290 Pfam PF13672 Protein phosphatase 2C 31 242 7.3E-19 T 22-04-2016 RM25_RS05995 f4acbb1e24461544b72759ade3e4e08b 369 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 363 37.822 T 22-04-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 RM25_RS05995 f4acbb1e24461544b72759ade3e4e08b 369 Gene3D G3DSA:1.20.58.410 4 115 1.4E-33 T 22-04-2016 RM25_RS05995 f4acbb1e24461544b72759ade3e4e08b 369 SUPERFAMILY SSF75620 31 365 1.7E-121 T 22-04-2016 RM25_RS05995 f4acbb1e24461544b72759ade3e4e08b 369 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 362 1.5E-152 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RM25_RS05995 f4acbb1e24461544b72759ade3e4e08b 369 SMART SM00937 84 194 4.9E-46 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RM25_RS05995 f4acbb1e24461544b72759ade3e4e08b 369 Pfam PF00472 RF-1 domain 228 335 5.8E-37 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RM25_RS05995 f4acbb1e24461544b72759ade3e4e08b 369 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RM25_RS05995 f4acbb1e24461544b72759ade3e4e08b 369 PANTHER PTHR11075 25 369 1.1E-141 T 22-04-2016 RM25_RS05995 f4acbb1e24461544b72759ade3e4e08b 369 PANTHER PTHR11075:SF6 25 369 1.1E-141 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RM25_RS05995 f4acbb1e24461544b72759ade3e4e08b 369 Gene3D G3DSA:3.30.160.20 227 305 5.0E-33 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RM25_RS05995 f4acbb1e24461544b72759ade3e4e08b 369 Pfam PF03462 PCRF domain 30 219 5.0E-59 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RM25_RS01500 f16afa1948141a4359c0b9dc3f7f2e36 438 PANTHER PTHR30569 21 438 1.5E-29 T 22-04-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 RM25_RS01500 f16afa1948141a4359c0b9dc3f7f2e36 438 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 51 352 1.2E-11 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 RM25_RS07420 c3df449c1e991357d857299e1065eec6 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 12 116 6.1E-36 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RM25_RS07420 c3df449c1e991357d857299e1065eec6 116 Gene3D G3DSA:2.60.300.12 12 107 1.8E-28 T 22-04-2016 IPR000361 FeS cluster biogenesis RM25_RS07420 c3df449c1e991357d857299e1065eec6 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 98 115 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RM25_RS07420 c3df449c1e991357d857299e1065eec6 116 SUPERFAMILY SSF89360 12 106 5.1E-28 T 22-04-2016 IPR000361 FeS cluster biogenesis RM25_RS07420 c3df449c1e991357d857299e1065eec6 116 PANTHER PTHR10072 12 116 4.3E-39 T 22-04-2016 RM25_RS07420 c3df449c1e991357d857299e1065eec6 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 113 1.1E-18 T 22-04-2016 IPR000361 FeS cluster biogenesis RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 5.1E-43 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 5.1E-43 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 PRINTS PR00127 Clp protease catalytic subunit P signature 178 197 5.1E-43 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 5.1E-43 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 5.1E-43 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 22-04-2016 IPR018215 ClpP, Ser active site RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 PANTHER PTHR10381 5 201 6.0E-104 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 Pfam PF00574 Clp protease 23 201 2.2E-73 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 SUPERFAMILY SSF52096 18 203 2.44E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 Gene3D G3DSA:3.90.226.10 11 201 3.1E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 PANTHER PTHR10381:SF7 5 201 6.0E-104 T 22-04-2016 RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 22-04-2016 IPR033135 ClpP, histidine active site RM25_RS03860 1cd5ffabda9422192f46da931bcf2cf6 206 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 203 40.249 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RM25_RS02245 0a7d5014fed1049798c37f370e3e9354 336 SUPERFAMILY SSF50129 4 159 2.28E-40 T 22-04-2016 IPR011032 GroES-like RM25_RS02245 0a7d5014fed1049798c37f370e3e9354 336 Gene3D G3DSA:3.90.180.10 3 161 2.4E-33 T 22-04-2016 IPR011032 GroES-like RM25_RS02245 0a7d5014fed1049798c37f370e3e9354 336 SMART SM00829 5 334 4.5E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RM25_RS02245 0a7d5014fed1049798c37f370e3e9354 336 Gene3D G3DSA:3.40.50.720 162 281 1.6E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS02245 0a7d5014fed1049798c37f370e3e9354 336 Pfam PF00107 Zinc-binding dehydrogenase 170 297 4.6E-23 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RM25_RS02245 0a7d5014fed1049798c37f370e3e9354 336 PANTHER PTHR11695:SF601 7 336 5.7E-128 T 22-04-2016 RM25_RS02245 0a7d5014fed1049798c37f370e3e9354 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 21 117 5.4E-22 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RM25_RS02245 0a7d5014fed1049798c37f370e3e9354 336 PANTHER PTHR11695 7 336 5.7E-128 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RM25_RS02245 0a7d5014fed1049798c37f370e3e9354 336 SUPERFAMILY SSF51735 141 303 5.92E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS02040 348978cf09034bfc42331e4baa8c746d 203 SUPERFAMILY SSF51735 1 199 8.1E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS02040 348978cf09034bfc42331e4baa8c746d 203 PANTHER PTHR15020:SF29 1 203 1.3E-37 T 22-04-2016 RM25_RS02040 348978cf09034bfc42331e4baa8c746d 203 Pfam PF13460 NAD(P)H-binding 7 191 1.4E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS02040 348978cf09034bfc42331e4baa8c746d 203 PANTHER PTHR15020 1 203 1.3E-37 T 22-04-2016 RM25_RS02040 348978cf09034bfc42331e4baa8c746d 203 Gene3D G3DSA:3.40.50.720 1 199 4.4E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS08050 a67e8c0235f76a9fff994306f3a974a9 461 PIRSF PIRSF006060 1 459 2.2E-69 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS08050 a67e8c0235f76a9fff994306f3a974a9 461 PANTHER PTHR11785 1 437 3.0E-64 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS08050 a67e8c0235f76a9fff994306f3a974a9 461 Pfam PF13520 Amino acid permease 11 412 5.4E-37 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS10410 138fd3a5d1ad2e51c736b156cb78af8b 272 SUPERFAMILY SSF102588 17 237 2.49E-41 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain RM25_RS10410 138fd3a5d1ad2e51c736b156cb78af8b 272 PANTHER PTHR12993:SF13 142 231 1.6E-33 T 22-04-2016 RM25_RS10410 138fd3a5d1ad2e51c736b156cb78af8b 272 PANTHER PTHR12993:SF13 17 123 1.6E-33 T 22-04-2016 RM25_RS10410 138fd3a5d1ad2e51c736b156cb78af8b 272 Gene3D G3DSA:3.40.50.10320 17 250 1.9E-46 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain RM25_RS10410 138fd3a5d1ad2e51c736b156cb78af8b 272 Pfam PF02585 GlcNAc-PI de-N-acetylase 21 185 3.8E-20 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RM25_RS10410 138fd3a5d1ad2e51c736b156cb78af8b 272 PANTHER PTHR12993 142 231 1.6E-33 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RM25_RS10410 138fd3a5d1ad2e51c736b156cb78af8b 272 PANTHER PTHR12993 17 123 1.6E-33 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RM25_RS04005 4117678cc05ac821febf6f11a64a78e4 306 SUPERFAMILY SSF51735 6 305 1.67E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04005 4117678cc05ac821febf6f11a64a78e4 306 Gene3D G3DSA:3.40.50.720 5 216 1.2E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04005 4117678cc05ac821febf6f11a64a78e4 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 212 2.7E-18 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RM25_RS04005 4117678cc05ac821febf6f11a64a78e4 306 PANTHER PTHR10366 264 305 1.9E-18 T 22-04-2016 RM25_RS04005 4117678cc05ac821febf6f11a64a78e4 306 PANTHER PTHR10366 6 244 1.9E-18 T 22-04-2016 RM25_RS04610 3b254320de226f5e0f9b7b0202f7a608 150 PANTHER PTHR10173 25 150 5.4E-54 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RM25_RS04610 3b254320de226f5e0f9b7b0202f7a608 150 SUPERFAMILY SSF51316 19 148 4.29E-50 T 22-04-2016 IPR011057 Mss4-like RM25_RS04610 3b254320de226f5e0f9b7b0202f7a608 150 PANTHER PTHR10173:SF18 25 150 5.4E-54 T 22-04-2016 RM25_RS04610 3b254320de226f5e0f9b7b0202f7a608 150 Pfam PF01641 SelR domain 24 145 1.0E-47 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RM25_RS04610 3b254320de226f5e0f9b7b0202f7a608 150 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 21 146 3.9E-43 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RM25_RS04610 3b254320de226f5e0f9b7b0202f7a608 150 Gene3D G3DSA:2.170.150.20 20 148 3.7E-54 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RM25_RS07705 9570664956e1199c831e34baa0fce8f3 74 SUPERFAMILY SSF47598 2 50 7.78E-10 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RM25_RS07705 9570664956e1199c831e34baa0fce8f3 74 Gene3D G3DSA:1.10.1220.10 7 48 5.6E-5 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RM25_RS10185 90e563865ed2980eff4897e0532ff95a 149 SUPERFAMILY SSF54197 3 132 2.17E-26 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RM25_RS10185 90e563865ed2980eff4897e0532ff95a 149 Pfam PF01230 HIT domain 13 98 4.2E-15 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RM25_RS10185 90e563865ed2980eff4897e0532ff95a 149 PANTHER PTHR23089 1 98 5.3E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RM25_RS10185 90e563865ed2980eff4897e0532ff95a 149 Gene3D G3DSA:3.30.428.10 2 130 2.9E-23 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RM25_RS10185 90e563865ed2980eff4897e0532ff95a 149 PRINTS PR00332 Histidine triad family signature 87 97 1.3E-9 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RM25_RS10185 90e563865ed2980eff4897e0532ff95a 149 PRINTS PR00332 Histidine triad family signature 25 43 1.3E-9 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RM25_RS10185 90e563865ed2980eff4897e0532ff95a 149 PRINTS PR00332 Histidine triad family signature 4 20 1.3E-9 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RM25_RS10185 90e563865ed2980eff4897e0532ff95a 149 ProSitePatterns PS00892 HIT domain signature. 80 98 - T 22-04-2016 IPR019808 Histidine triad, conserved site RM25_RS03250 d82b86eb048236fc92cdfd587a83fe1a 121 SUPERFAMILY SSF46955 1 112 3.41E-31 T 22-04-2016 IPR009061 Putative DNA-binding domain RM25_RS03250 d82b86eb048236fc92cdfd587a83fe1a 121 Gene3D G3DSA:1.10.1660.10 1 114 1.1E-32 T 22-04-2016 RM25_RS03250 d82b86eb048236fc92cdfd587a83fe1a 121 PANTHER PTHR30204 1 116 3.9E-36 T 22-04-2016 RM25_RS03250 d82b86eb048236fc92cdfd587a83fe1a 121 Pfam PF13411 MerR HTH family regulatory protein 1 66 4.7E-22 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS03250 d82b86eb048236fc92cdfd587a83fe1a 121 PANTHER PTHR30204:SF2 1 116 3.9E-36 T 22-04-2016 RM25_RS03250 d82b86eb048236fc92cdfd587a83fe1a 121 SMART SM00422 1 69 1.4E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS09140 6fecbbccbdaff1909215458774eaf290 244 PIRSF PIRSF001435 20 233 5.2E-40 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RM25_RS09140 6fecbbccbdaff1909215458774eaf290 244 SUPERFAMILY SSF48150 27 230 4.24E-61 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RM25_RS09140 6fecbbccbdaff1909215458774eaf290 244 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 55 183 1.2E-14 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RM25_RS09140 6fecbbccbdaff1909215458774eaf290 244 Pfam PF00633 Helix-hairpin-helix motif 121 147 2.0E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RM25_RS09140 6fecbbccbdaff1909215458774eaf290 244 Hamap MF_00942 Endonuclease III [nth]. 1 230 35.07 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RM25_RS09140 6fecbbccbdaff1909215458774eaf290 244 Gene3D G3DSA:1.10.1670.10 144 227 1.2E-26 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RM25_RS09140 6fecbbccbdaff1909215458774eaf290 244 SMART SM00478 59 206 4.0E-47 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RM25_RS09140 6fecbbccbdaff1909215458774eaf290 244 Gene3D G3DSA:1.10.340.30 46 143 8.8E-32 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RM25_RS09140 6fecbbccbdaff1909215458774eaf290 244 PANTHER PTHR10359:SF18 24 226 7.2E-63 T 22-04-2016 RM25_RS09140 6fecbbccbdaff1909215458774eaf290 244 TIGRFAM TIGR01083 nth: endonuclease III 27 215 1.4E-68 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RM25_RS09140 6fecbbccbdaff1909215458774eaf290 244 PANTHER PTHR10359 24 226 7.2E-63 T 22-04-2016 RM25_RS02300 03d6a5b650f27988b8098a7c0b1e2766 293 PIRSF PIRSF005355 1 293 6.6E-83 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 RM25_RS02300 03d6a5b650f27988b8098a7c0b1e2766 293 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 3 288 20.541 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RM25_RS02300 03d6a5b650f27988b8098a7c0b1e2766 293 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 12 284 7.5E-79 T 22-04-2016 RM25_RS02300 03d6a5b650f27988b8098a7c0b1e2766 293 PANTHER PTHR13929 6 293 3.7E-54 T 22-04-2016 RM25_RS02300 03d6a5b650f27988b8098a7c0b1e2766 293 Pfam PF01040 UbiA prenyltransferase family 20 251 4.3E-33 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RM25_RS06445 da728f7bc86d70a75025fc19c0e60b47 242 SMART SM00382 34 214 9.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS06445 da728f7bc86d70a75025fc19c0e60b47 242 Gene3D G3DSA:3.40.50.300 2 229 2.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06445 da728f7bc86d70a75025fc19c0e60b47 242 Pfam PF00005 ABC transporter 36 169 3.0E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS06445 da728f7bc86d70a75025fc19c0e60b47 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS06445 da728f7bc86d70a75025fc19c0e60b47 242 PANTHER PTHR24220 12 232 1.1E-53 T 22-04-2016 RM25_RS06445 da728f7bc86d70a75025fc19c0e60b47 242 SUPERFAMILY SSF52540 23 219 1.77E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06445 da728f7bc86d70a75025fc19c0e60b47 242 PANTHER PTHR24220:SF66 12 232 1.1E-53 T 22-04-2016 RM25_RS04565 b59bd140bf2f7273646c2ba4cb0da56d 332 Pfam PF13410 Glutathione S-transferase, C-terminal domain 208 278 1.4E-11 T 22-04-2016 RM25_RS04565 b59bd140bf2f7273646c2ba4cb0da56d 332 PIRSF PIRSF015753 15 329 8.0E-97 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 RM25_RS04565 b59bd140bf2f7273646c2ba4cb0da56d 332 Gene3D G3DSA:1.20.1050.10 176 292 4.1E-20 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RM25_RS04565 b59bd140bf2f7273646c2ba4cb0da56d 332 PANTHER PTHR32419 19 331 1.4E-104 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 RM25_RS04565 b59bd140bf2f7273646c2ba4cb0da56d 332 Pfam PF13409 Glutathione S-transferase, N-terminal domain 67 153 2.5E-10 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RM25_RS04565 b59bd140bf2f7273646c2ba4cb0da56d 332 SUPERFAMILY SSF47616 170 303 7.78E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RM25_RS04565 b59bd140bf2f7273646c2ba4cb0da56d 332 Gene3D G3DSA:3.40.30.10 48 175 2.0E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS04565 b59bd140bf2f7273646c2ba4cb0da56d 332 PANTHER PTHR32419:SF6 19 331 1.4E-104 T 22-04-2016 RM25_RS10765 f41435a916bc8bd6046ec764ad7db642 364 Pfam PF03631 Virulence factor BrkB 45 301 1.6E-67 T 22-04-2016 IPR017039 Virulence factor BrkB RM25_RS10765 f41435a916bc8bd6046ec764ad7db642 364 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 39 299 2.5E-38 T 22-04-2016 IPR017039 Virulence factor BrkB RM25_RS10765 f41435a916bc8bd6046ec764ad7db642 364 PIRSF PIRSF035875 20 323 2.7E-89 T 22-04-2016 IPR017039 Virulence factor BrkB RM25_RS10765 f41435a916bc8bd6046ec764ad7db642 364 PANTHER PTHR30213:SF2 7 326 4.5E-89 T 22-04-2016 RM25_RS10765 f41435a916bc8bd6046ec764ad7db642 364 PANTHER PTHR30213 7 326 4.5E-89 T 22-04-2016 RM25_RS01235 3f854c2c135fd78ae57439bd3653a1dc 242 PRINTS PR01837 MgtC/SapB protein signature 72 94 1.6E-40 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RM25_RS01235 3f854c2c135fd78ae57439bd3653a1dc 242 PRINTS PR01837 MgtC/SapB protein signature 38 56 1.6E-40 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RM25_RS01235 3f854c2c135fd78ae57439bd3653a1dc 242 PRINTS PR01837 MgtC/SapB protein signature 99 123 1.6E-40 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RM25_RS01235 3f854c2c135fd78ae57439bd3653a1dc 242 PRINTS PR01837 MgtC/SapB protein signature 19 38 1.6E-40 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RM25_RS01235 3f854c2c135fd78ae57439bd3653a1dc 242 PANTHER PTHR33778 16 238 2.1E-49 T 22-04-2016 RM25_RS01235 3f854c2c135fd78ae57439bd3653a1dc 242 Pfam PF02308 MgtC family 16 143 2.0E-33 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RM25_RS05745 5ee82639df5b87906f1d1c0b173bec61 397 Gene3D G3DSA:3.30.70.260 314 396 7.7E-21 T 22-04-2016 RM25_RS05745 5ee82639df5b87906f1d1c0b173bec61 397 PANTHER PTHR10996:SF18 1 358 1.9E-163 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 RM25_RS05745 5ee82639df5b87906f1d1c0b173bec61 397 Gene3D G3DSA:3.40.50.720 2 109 3.6E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS05745 5ee82639df5b87906f1d1c0b173bec61 397 SUPERFAMILY SSF52283 2 127 1.81E-33 T 22-04-2016 RM25_RS05745 5ee82639df5b87906f1d1c0b173bec61 397 SUPERFAMILY SSF55021 322 396 8.74E-12 T 22-04-2016 RM25_RS05745 5ee82639df5b87906f1d1c0b173bec61 397 PANTHER PTHR10996 1 358 1.9E-163 T 22-04-2016 RM25_RS05745 5ee82639df5b87906f1d1c0b173bec61 397 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 144 171 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RM25_RS05745 5ee82639df5b87906f1d1c0b173bec61 397 SUPERFAMILY SSF51735 98 285 4.49E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS05745 5ee82639df5b87906f1d1c0b173bec61 397 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 284 2.2E-47 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RM25_RS05745 5ee82639df5b87906f1d1c0b173bec61 397 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 316 2.0E-27 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RM25_RS05745 5ee82639df5b87906f1d1c0b173bec61 397 Gene3D G3DSA:3.40.50.720 110 287 5.0E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS04355 0f24c3166805665d35ca23e78b5746b2 328 Gene3D G3DSA:3.40.50.300 21 193 1.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04355 0f24c3166805665d35ca23e78b5746b2 328 PANTHER PTHR11088 10 309 8.7E-85 T 22-04-2016 RM25_RS04355 0f24c3166805665d35ca23e78b5746b2 328 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 24 308 6.0E-74 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RM25_RS04355 0f24c3166805665d35ca23e78b5746b2 328 SUPERFAMILY SSF52540 23 169 2.75E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04355 0f24c3166805665d35ca23e78b5746b2 328 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 23 319 27.385 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RM25_RS04355 0f24c3166805665d35ca23e78b5746b2 328 Pfam PF01715 IPP transferase 62 303 6.5E-70 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RM25_RS04355 0f24c3166805665d35ca23e78b5746b2 328 Gene3D G3DSA:1.10.287.890 219 300 3.8E-24 T 22-04-2016 RM25_RS04355 0f24c3166805665d35ca23e78b5746b2 328 SUPERFAMILY SSF52540 161 233 3.0E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04355 0f24c3166805665d35ca23e78b5746b2 328 SUPERFAMILY SSF52540 22 57 3.0E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00575 ef8d10d138760be6f5dde0c25e08ab92 447 PANTHER PTHR30354 1 447 3.4E-113 T 22-04-2016 RM25_RS00575 ef8d10d138760be6f5dde0c25e08ab92 447 PIRSF PIRSF002746 1 445 1.1E-124 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RM25_RS00575 ef8d10d138760be6f5dde0c25e08ab92 447 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 3 443 2.9E-110 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RM25_RS00575 ef8d10d138760be6f5dde0c25e08ab92 447 PANTHER PTHR30354:SF1 1 447 3.4E-113 T 22-04-2016 RM25_RS00575 ef8d10d138760be6f5dde0c25e08ab92 447 Pfam PF02447 GntP family permease 3 440 8.8E-118 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RM25_RS07370 dfac7d42b917d933d32cf673f38fc774 89 Pfam PF01037 Lrp/AsnC ligand binding domain 8 76 2.0E-14 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RM25_RS07370 dfac7d42b917d933d32cf673f38fc774 89 Gene3D G3DSA:3.30.70.920 3 78 9.7E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RM25_RS07370 dfac7d42b917d933d32cf673f38fc774 89 PANTHER PTHR30154 1 81 1.4E-15 T 22-04-2016 RM25_RS07370 dfac7d42b917d933d32cf673f38fc774 89 PANTHER PTHR30154:SF12 1 81 1.4E-15 T 22-04-2016 RM25_RS07370 dfac7d42b917d933d32cf673f38fc774 89 SUPERFAMILY SSF54909 2 78 5.09E-18 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RM25_RS00830 accbef0371f847e963d2ead79a833483 312 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS00830 accbef0371f847e963d2ead79a833483 312 PANTHER PTHR24220:SF484 13 234 1.8E-119 T 22-04-2016 RM25_RS00830 accbef0371f847e963d2ead79a833483 312 SMART SM00382 40 226 2.8E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS00830 accbef0371f847e963d2ead79a833483 312 Gene3D G3DSA:3.40.50.300 12 235 1.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00830 accbef0371f847e963d2ead79a833483 312 PANTHER PTHR24220 13 234 1.8E-119 T 22-04-2016 RM25_RS00830 accbef0371f847e963d2ead79a833483 312 SUPERFAMILY SSF52540 13 236 5.79E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00830 accbef0371f847e963d2ead79a833483 312 Pfam PF00005 ABC transporter 31 177 1.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS00365 c2a3da2ce8f5ec5a6d16a56da59f3800 320 Pfam PF00535 Glycosyl transferase family 2 13 127 4.0E-18 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RM25_RS00365 c2a3da2ce8f5ec5a6d16a56da59f3800 320 Gene3D G3DSA:3.90.550.10 10 226 2.8E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS00365 c2a3da2ce8f5ec5a6d16a56da59f3800 320 SUPERFAMILY SSF53448 4 247 1.03E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS00365 c2a3da2ce8f5ec5a6d16a56da59f3800 320 PANTHER PTHR22916 5 294 3.6E-25 T 22-04-2016 RM25_RS03185 47053c4a0f1f961a3743ea9d1892c79d 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 98 2.2E-5 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD RM25_RS01215 18f99d0b1b67dc479e6ab70dd6d79cb0 239 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 5.3E-17 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS01215 18f99d0b1b67dc479e6ab70dd6d79cb0 239 Gene3D G3DSA:1.10.357.10 8 176 1.0E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS01215 18f99d0b1b67dc479e6ab70dd6d79cb0 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS01215 18f99d0b1b67dc479e6ab70dd6d79cb0 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS01215 18f99d0b1b67dc479e6ab70dd6d79cb0 239 SUPERFAMILY SSF48498 86 176 3.84E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RM25_RS01215 18f99d0b1b67dc479e6ab70dd6d79cb0 239 SUPERFAMILY SSF46689 4 69 2.72E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS01215 18f99d0b1b67dc479e6ab70dd6d79cb0 239 PANTHER PTHR30055 1 233 9.4E-25 T 22-04-2016 RM25_RS01215 18f99d0b1b67dc479e6ab70dd6d79cb0 239 PANTHER PTHR30055:SF47 1 233 9.4E-25 T 22-04-2016 RM25_RS03690 924b6ad61555fbcf2294c0c4b3510dd3 223 Pfam PF00929 Exonuclease 3 166 5.2E-30 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RM25_RS03690 924b6ad61555fbcf2294c0c4b3510dd3 223 Gene3D G3DSA:3.30.420.10 2 175 2.3E-68 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03690 924b6ad61555fbcf2294c0c4b3510dd3 223 PANTHER PTHR11046 2 189 8.6E-96 T 22-04-2016 RM25_RS03690 924b6ad61555fbcf2294c0c4b3510dd3 223 SMART SM00479 1 176 4.3E-29 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RM25_RS03690 924b6ad61555fbcf2294c0c4b3510dd3 223 SUPERFAMILY SSF53098 2 173 3.57E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS03690 924b6ad61555fbcf2294c0c4b3510dd3 223 PANTHER PTHR11046:SF5 2 189 8.6E-96 T 22-04-2016 RM25_RS11565 c704c30590d014a35f569ab1c192c753 439 PANTHER PTHR30061 1 429 1.1E-38 T 22-04-2016 RM25_RS11565 c704c30590d014a35f569ab1c192c753 439 SUPERFAMILY SSF53850 67 429 2.96E-51 T 22-04-2016 RM25_RS11565 c704c30590d014a35f569ab1c192c753 439 Gene3D G3DSA:3.40.190.10 185 367 1.1E-32 T 22-04-2016 RM25_RS11565 c704c30590d014a35f569ab1c192c753 439 Gene3D G3DSA:3.40.190.10 72 184 1.7E-12 T 22-04-2016 RM25_RS11565 c704c30590d014a35f569ab1c192c753 439 Pfam PF01547 Bacterial extracellular solute-binding protein 84 348 8.1E-20 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 RM25_RS06085 c0c86713685f6160c33b407531108da1 659 Pfam PF00326 Prolyl oligopeptidase family 433 639 3.7E-47 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RM25_RS06085 c0c86713685f6160c33b407531108da1 659 Gene3D G3DSA:3.40.50.1820 347 636 1.7E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS06085 c0c86713685f6160c33b407531108da1 659 SUPERFAMILY SSF82171 89 330 6.28E-9 T 22-04-2016 RM25_RS06085 c0c86713685f6160c33b407531108da1 659 PANTHER PTHR11731 15 21 1.4E-128 T 22-04-2016 RM25_RS06085 c0c86713685f6160c33b407531108da1 659 PANTHER PTHR11731 40 650 1.4E-128 T 22-04-2016 RM25_RS06085 c0c86713685f6160c33b407531108da1 659 SUPERFAMILY SSF53474 394 638 5.36E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS06085 c0c86713685f6160c33b407531108da1 659 PANTHER PTHR11731:SF75 15 21 1.4E-128 T 22-04-2016 RM25_RS06085 c0c86713685f6160c33b407531108da1 659 PANTHER PTHR11731:SF75 40 650 1.4E-128 T 22-04-2016 RM25_RS06085 c0c86713685f6160c33b407531108da1 659 Gene3D G3DSA:2.130.10.10 22 332 1.0E-9 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RM25_RS08075 bc2248ea7ec608eb133a822dd994dca4 231 PANTHER PTHR30294 35 222 1.1E-27 T 22-04-2016 RM25_RS08075 bc2248ea7ec608eb133a822dd994dca4 231 PIRSF PIRSF006648 22 226 2.1E-23 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RM25_RS08075 bc2248ea7ec608eb133a822dd994dca4 231 Pfam PF01061 ABC-2 type transporter 8 188 3.7E-25 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RM25_RS12035 000adebf907a51cf64c6e511ee8d6e66 391 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 28 39 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS12035 000adebf907a51cf64c6e511ee8d6e66 391 Pfam PF13353 4Fe-4S single cluster domain 29 95 3.0E-5 T 22-04-2016 RM25_RS12035 000adebf907a51cf64c6e511ee8d6e66 391 SMART SM00729 22 231 0.0024 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RM25_RS12035 000adebf907a51cf64c6e511ee8d6e66 391 PANTHER PTHR22960 290 345 4.4E-92 T 22-04-2016 RM25_RS12035 000adebf907a51cf64c6e511ee8d6e66 391 PANTHER PTHR22960 255 265 4.4E-92 T 22-04-2016 RM25_RS12035 000adebf907a51cf64c6e511ee8d6e66 391 PANTHER PTHR22960 15 236 4.4E-92 T 22-04-2016 RM25_RS12035 000adebf907a51cf64c6e511ee8d6e66 391 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 13 391 37.395 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS12035 000adebf907a51cf64c6e511ee8d6e66 391 Gene3D G3DSA:3.20.20.70 13 253 3.7E-70 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS12035 000adebf907a51cf64c6e511ee8d6e66 391 Gene3D G3DSA:3.20.20.70 302 370 3.7E-70 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS12035 000adebf907a51cf64c6e511ee8d6e66 391 Pfam PF06463 Molybdenum Cofactor Synthesis C 289 373 1.3E-25 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RM25_RS12035 000adebf907a51cf64c6e511ee8d6e66 391 Pfam PF04055 Radical SAM superfamily 27 192 1.9E-24 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RM25_RS12035 000adebf907a51cf64c6e511ee8d6e66 391 SUPERFAMILY SSF102114 14 237 9.29E-56 T 22-04-2016 RM25_RS05755 68345812c7d56396d11dca32a2a4c739 285 Pfam PF00005 ABC transporter 24 181 1.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS05755 68345812c7d56396d11dca32a2a4c739 285 SUPERFAMILY SSF52540 6 252 1.89E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05755 68345812c7d56396d11dca32a2a4c739 285 SMART SM00382 33 231 2.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS05755 68345812c7d56396d11dca32a2a4c739 285 Gene3D G3DSA:3.40.50.300 5 254 1.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05755 68345812c7d56396d11dca32a2a4c739 285 PANTHER PTHR24220:SF586 8 255 1.4E-106 T 22-04-2016 RM25_RS05755 68345812c7d56396d11dca32a2a4c739 285 PANTHER PTHR24220 8 255 1.4E-106 T 22-04-2016 RM25_RS10595 58506b4a5fa300f3664e4ec13b8acb34 193 SUPERFAMILY SSF53041 1 140 1.29E-33 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RM25_RS10595 58506b4a5fa300f3664e4ec13b8acb34 193 PANTHER PTHR30461:SF9 1 184 3.3E-37 T 22-04-2016 RM25_RS10595 58506b4a5fa300f3664e4ec13b8acb34 193 Gene3D G3DSA:3.40.50.1390 1 122 3.7E-29 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RM25_RS10595 58506b4a5fa300f3664e4ec13b8acb34 193 SUPERFAMILY SSF46689 143 184 3.85E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10595 58506b4a5fa300f3664e4ec13b8acb34 193 PANTHER PTHR30461 1 184 3.3E-37 T 22-04-2016 RM25_RS10595 58506b4a5fa300f3664e4ec13b8acb34 193 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RM25_RS10595 58506b4a5fa300f3664e4ec13b8acb34 193 SMART SM00857 3 141 4.3E-43 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RM25_RS10595 58506b4a5fa300f3664e4ec13b8acb34 193 Pfam PF00239 Resolvase, N terminal domain 3 140 4.3E-35 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RM25_RS10595 58506b4a5fa300f3664e4ec13b8acb34 193 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RM25_RS10595 58506b4a5fa300f3664e4ec13b8acb34 193 Gene3D G3DSA:1.10.10.60 143 184 6.0E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS08850 06ed25c2787a26477ff935a0e2bf8feb 505 SUPERFAMILY SSF89000 307 467 9.81E-55 T 22-04-2016 RM25_RS08850 06ed25c2787a26477ff935a0e2bf8feb 505 SUPERFAMILY SSF51569 8 309 3.48E-85 T 22-04-2016 RM25_RS08850 06ed25c2787a26477ff935a0e2bf8feb 505 Pfam PF00682 HMGL-like 14 280 1.4E-47 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RM25_RS08850 06ed25c2787a26477ff935a0e2bf8feb 505 PANTHER PTHR18866 12 500 6.1E-168 T 22-04-2016 RM25_RS08850 06ed25c2787a26477ff935a0e2bf8feb 505 Gene3D G3DSA:3.20.20.70 8 294 2.4E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS08850 06ed25c2787a26477ff935a0e2bf8feb 505 Pfam PF02436 Conserved carboxylase domain 302 485 1.2E-53 T 22-04-2016 IPR003379 Carboxylase, conserved domain RM25_RS08850 06ed25c2787a26477ff935a0e2bf8feb 505 PANTHER PTHR18866:SF109 12 500 6.1E-168 T 22-04-2016 RM25_RS11620 f71ea979e567124a553a6bb3b3c46e7b 142 SUPERFAMILY SSF54211 2 123 4.05E-20 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RM25_RS11620 f71ea979e567124a553a6bb3b3c46e7b 142 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 81 3.2E-15 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RM25_RS11620 f71ea979e567124a553a6bb3b3c46e7b 142 Pfam PF00825 Ribonuclease P 2 122 2.0E-23 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RM25_RS11620 f71ea979e567124a553a6bb3b3c46e7b 142 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 60 74 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 RM25_RS11620 f71ea979e567124a553a6bb3b3c46e7b 142 PANTHER PTHR33992 1 141 4.3E-21 T 22-04-2016 RM25_RS11620 f71ea979e567124a553a6bb3b3c46e7b 142 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 2 125 15.733 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RM25_RS11620 f71ea979e567124a553a6bb3b3c46e7b 142 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 8 75 9.0E-6 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RM25_RS11620 f71ea979e567124a553a6bb3b3c46e7b 142 Gene3D G3DSA:3.30.230.10 2 122 1.3E-27 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RM25_RS04675 6caae6e030a4a33103c9de9e704aca55 206 PIRSF PIRSF000847 9 195 2.9E-42 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RM25_RS04675 6caae6e030a4a33103c9de9e704aca55 206 PANTHER PTHR14269 11 181 4.9E-31 T 22-04-2016 RM25_RS04675 6caae6e030a4a33103c9de9e704aca55 206 Pfam PF01066 CDP-alcohol phosphatidyltransferase 14 77 3.3E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RM25_RS04675 6caae6e030a4a33103c9de9e704aca55 206 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 55 77 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RM25_RS06615 31ea9ff5ccbe2b64a13aa91494da00c6 425 PANTHER PTHR10314:SF21 30 184 1.7E-198 T 22-04-2016 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS06615 31ea9ff5ccbe2b64a13aa91494da00c6 425 PANTHER PTHR10314:SF21 201 422 1.7E-198 T 22-04-2016 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS06615 31ea9ff5ccbe2b64a13aa91494da00c6 425 Gene3D G3DSA:3.40.50.1100 216 421 1.5E-49 T 22-04-2016 RM25_RS06615 31ea9ff5ccbe2b64a13aa91494da00c6 425 TIGRFAM TIGR01415 trpB_rel: pyridoxal-phosphate dependent TrpB-like enzyme 12 422 1.5E-170 T 22-04-2016 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS06615 31ea9ff5ccbe2b64a13aa91494da00c6 425 PIRSF PIRSF500824 6 425 1.1E-177 T 22-04-2016 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS06615 31ea9ff5ccbe2b64a13aa91494da00c6 425 Gene3D G3DSA:3.40.50.1100 128 215 4.9E-6 T 22-04-2016 RM25_RS06615 31ea9ff5ccbe2b64a13aa91494da00c6 425 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 104 118 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS06615 31ea9ff5ccbe2b64a13aa91494da00c6 425 PANTHER PTHR10314 30 184 1.7E-198 T 22-04-2016 RM25_RS06615 31ea9ff5ccbe2b64a13aa91494da00c6 425 PANTHER PTHR10314 201 422 1.7E-198 T 22-04-2016 RM25_RS06615 31ea9ff5ccbe2b64a13aa91494da00c6 425 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 76 412 4.8E-38 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS06615 31ea9ff5ccbe2b64a13aa91494da00c6 425 PIRSF PIRSF001413 9 424 1.3E-111 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RM25_RS06615 31ea9ff5ccbe2b64a13aa91494da00c6 425 SUPERFAMILY SSF53686 26 421 2.0E-100 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RM25_RS09515 f7e6569b5a468f9d7bb14c81ab1aadab 228 Pfam PF14219 Domain of unknown function (DUF4328) 62 217 3.3E-12 T 22-04-2016 IPR025565 Domain of unknown function DUF4328 RM25_RS04960 747369b314876f04ef0bcf78aa85aa0e 242 Pfam PF03729 Short repeat of unknown function (DUF308) 154 202 0.0012 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane RM25_RS04960 747369b314876f04ef0bcf78aa85aa0e 242 Pfam PF03729 Short repeat of unknown function (DUF308) 39 90 1.1E-6 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane RM25_RS04960 747369b314876f04ef0bcf78aa85aa0e 242 Pfam PF03729 Short repeat of unknown function (DUF308) 95 165 8.2E-6 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane RM25_RS02960 8629f265e71516c8939943775bdd900c 454 SUPERFAMILY SSF53335 46 250 4.51E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS02960 8629f265e71516c8939943775bdd900c 454 Gene3D G3DSA:3.40.50.150 96 221 1.0E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS02110 a67c9337db67de09ec25aabd0944e731 144 Pfam PF13411 MerR HTH family regulatory protein 17 82 3.2E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS02110 a67c9337db67de09ec25aabd0944e731 144 PANTHER PTHR30204 11 112 2.9E-27 T 22-04-2016 RM25_RS02110 a67c9337db67de09ec25aabd0944e731 144 SUPERFAMILY SSF46955 17 114 5.04E-20 T 22-04-2016 IPR009061 Putative DNA-binding domain RM25_RS02110 a67c9337db67de09ec25aabd0944e731 144 SMART SM00422 17 86 3.3E-20 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS02110 a67c9337db67de09ec25aabd0944e731 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 18 29 2.5E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS02110 a67c9337db67de09ec25aabd0944e731 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 52 72 2.5E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS02110 a67c9337db67de09ec25aabd0944e731 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 29 42 2.5E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS02110 a67c9337db67de09ec25aabd0944e731 144 PANTHER PTHR30204:SF8 11 112 2.9E-27 T 22-04-2016 RM25_RS02110 a67c9337db67de09ec25aabd0944e731 144 Gene3D G3DSA:1.10.1660.10 17 115 1.0E-22 T 22-04-2016 RM25_RS05330 f6d2fb2db577c4303111e83bec7cf938 268 Gene3D G3DSA:3.90.550.10 10 210 2.9E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS05330 f6d2fb2db577c4303111e83bec7cf938 268 Pfam PF00535 Glycosyl transferase family 2 13 176 4.2E-27 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RM25_RS05330 f6d2fb2db577c4303111e83bec7cf938 268 SUPERFAMILY SSF53448 9 223 5.91E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS05330 f6d2fb2db577c4303111e83bec7cf938 268 PANTHER PTHR10859 4 222 3.6E-60 T 22-04-2016 RM25_RS05975 b1b63cd2b1e79de453138dc1f769398b 621 Pfam PF09972 Predicted membrane protein (DUF2207) 31 542 7.1E-73 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane RM25_RS11755 02fc4e3341d3e1bdb12ed4c7c8137e41 186 Gene3D G3DSA:3.40.50.300 2 135 5.8E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11755 02fc4e3341d3e1bdb12ed4c7c8137e41 186 Pfam PF13671 AAA domain 2 130 1.8E-16 T 22-04-2016 RM25_RS11755 02fc4e3341d3e1bdb12ed4c7c8137e41 186 SUPERFAMILY SSF52540 1 140 3.36E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07120 f37476c39c574471a66d32f11cd537cc 388 Pfam PF12698 ABC-2 family transporter protein 21 362 7.2E-37 T 22-04-2016 RM25_RS07120 f37476c39c574471a66d32f11cd537cc 388 PANTHER PTHR41312 4 388 6.6E-32 T 22-04-2016 RM25_RS05640 8a28c1c556ffb51ec6a55ffb6f6c366c 207 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 1 199 1.1E-86 T 22-04-2016 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 RM25_RS05640 8a28c1c556ffb51ec6a55ffb6f6c366c 207 Gene3D G3DSA:3.40.50.1000 128 166 1.9E-7 T 22-04-2016 IPR023214 HAD-like domain RM25_RS05640 8a28c1c556ffb51ec6a55ffb6f6c366c 207 Pfam PF00702 haloacid dehalogenase-like hydrolase 68 163 3.1E-9 T 22-04-2016 RM25_RS05640 8a28c1c556ffb51ec6a55ffb6f6c366c 207 Gene3D G3DSA:3.90.1470.10 13 127 9.1E-38 T 22-04-2016 RM25_RS05640 8a28c1c556ffb51ec6a55ffb6f6c366c 207 SUPERFAMILY SSF56784 2 188 5.15E-38 T 22-04-2016 IPR023214 HAD-like domain RM25_RS07440 f7650cece1e23549109a51767199484d 184 Pfam PF11241 Protein of unknown function (DUF3043) 24 182 2.7E-37 T 22-04-2016 IPR021403 Protein of unknown function DUF3043 RM25_RS00805 e9b3baf0b6bef77aa94b1db8652144cd 239 Gene3D G3DSA:3.20.20.190 2 235 2.6E-75 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RM25_RS00805 e9b3baf0b6bef77aa94b1db8652144cd 239 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 231 9.1E-49 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RM25_RS00805 e9b3baf0b6bef77aa94b1db8652144cd 239 PANTHER PTHR23344 4 238 2.4E-71 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RM25_RS00805 e9b3baf0b6bef77aa94b1db8652144cd 239 SUPERFAMILY SSF51695 3 237 1.02E-72 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RM25_RS05720 48ea4b2e73fb114deb2d5058cc92aa17 577 Pfam PF14262 Domain of unknown function (DUF4353) 88 352 5.3E-80 T 22-04-2016 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 RM25_RS05720 48ea4b2e73fb114deb2d5058cc92aa17 577 Pfam PF14262 Domain of unknown function (DUF4353) 341 403 3.7E-10 T 22-04-2016 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 RM25_RS04090 bcb6670aacd9d3a12edd673b870b86b2 260 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 88 101 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site RM25_RS04090 bcb6670aacd9d3a12edd673b870b86b2 260 Gene3D G3DSA:3.40.190.80 181 245 9.3E-10 T 22-04-2016 RM25_RS04090 bcb6670aacd9d3a12edd673b870b86b2 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 3.8E-18 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS04090 bcb6670aacd9d3a12edd673b870b86b2 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 173 194 3.8E-18 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS04090 bcb6670aacd9d3a12edd673b870b86b2 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 3.8E-18 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS04090 bcb6670aacd9d3a12edd673b870b86b2 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 137 160 3.8E-18 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS04090 bcb6670aacd9d3a12edd673b870b86b2 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 204 228 3.8E-18 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS04090 bcb6670aacd9d3a12edd673b870b86b2 260 Gene3D G3DSA:3.30.540.10 16 151 3.9E-31 T 22-04-2016 RM25_RS04090 bcb6670aacd9d3a12edd673b870b86b2 260 Pfam PF00459 Inositol monophosphatase family 15 236 8.8E-33 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS04090 bcb6670aacd9d3a12edd673b870b86b2 260 SUPERFAMILY SSF56655 16 239 1.44E-47 T 22-04-2016 RM25_RS04090 bcb6670aacd9d3a12edd673b870b86b2 260 PANTHER PTHR20854 11 252 2.7E-31 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RM25_RS09215 2964578d87f0011c99f45c705ed42a8a 462 PANTHER PTHR30474:SF3 52 451 3.6E-148 T 22-04-2016 RM25_RS09215 2964578d87f0011c99f45c705ed42a8a 462 Pfam PF01098 Cell cycle protein 80 434 5.1E-73 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RM25_RS09215 2964578d87f0011c99f45c705ed42a8a 462 PANTHER PTHR30474 52 451 3.6E-148 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RM25_RS06665 ff2240c1b020e1fada3e7670ebe0f10b 247 Gene3D G3DSA:1.20.950.10 11 234 8.2E-10 T 22-04-2016 RM25_RS06665 ff2240c1b020e1fada3e7670ebe0f10b 247 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 20 244 1.0E-45 T 22-04-2016 IPR011138 Succinate dehydrogenase cytochrome b558 subunit UniPathway: UPA00223 RM25_RS06665 ff2240c1b020e1fada3e7670ebe0f10b 247 SUPERFAMILY SSF81343 4 245 8.01E-42 T 22-04-2016 RM25_RS07290 e6955b2f812496799feabc5d8bd9b456 325 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 15 304 6.2E-82 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS07290 e6955b2f812496799feabc5d8bd9b456 325 Pfam PF01795 MraW methylase family 3 305 1.5E-98 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS07290 e6955b2f812496799feabc5d8bd9b456 325 SUPERFAMILY SSF53335 210 305 1.78E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07290 e6955b2f812496799feabc5d8bd9b456 325 SUPERFAMILY SSF53335 9 107 1.78E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07290 e6955b2f812496799feabc5d8bd9b456 325 PANTHER PTHR11265:SF0 1 307 3.4E-108 T 22-04-2016 RM25_RS07290 e6955b2f812496799feabc5d8bd9b456 325 SUPERFAMILY SSF81799 108 210 3.53E-31 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS07290 e6955b2f812496799feabc5d8bd9b456 325 PANTHER PTHR11265 1 307 3.4E-108 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS07290 e6955b2f812496799feabc5d8bd9b456 325 Gene3D G3DSA:1.10.150.170 107 212 3.5E-34 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS07290 e6955b2f812496799feabc5d8bd9b456 325 Gene3D G3DSA:3.40.50.150 213 306 1.6E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07290 e6955b2f812496799feabc5d8bd9b456 325 Gene3D G3DSA:3.40.50.150 2 104 1.6E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07290 e6955b2f812496799feabc5d8bd9b456 325 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 305 32.555 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS07290 e6955b2f812496799feabc5d8bd9b456 325 PIRSF PIRSF004486 1 306 2.2E-86 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RM25_RS04000 1f68957536c5430f3fb859d144013ce2 145 Gene3D G3DSA:3.10.450.50 2 117 2.8E-4 T 22-04-2016 IPR032710 NTF2-like domain RM25_RS04000 1f68957536c5430f3fb859d144013ce2 145 SUPERFAMILY SSF54427 1 117 9.87E-6 T 22-04-2016 IPR032710 NTF2-like domain RM25_RS06460 396137f91bcb2bb7cf402aca4204b934 242 SUPERFAMILY SSF81901 28 198 2.22E-8 T 22-04-2016 RM25_RS06460 396137f91bcb2bb7cf402aca4204b934 242 Gene3D G3DSA:1.25.40.10 65 196 7.0E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RM25_RS11985 2d501db5977cda3d0e376ce7bd4de6e2 243 PANTHER PTHR30055 16 239 1.9E-12 T 22-04-2016 RM25_RS11985 2d501db5977cda3d0e376ce7bd4de6e2 243 SUPERFAMILY SSF46689 24 84 2.1E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS11985 2d501db5977cda3d0e376ce7bd4de6e2 243 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 79 1.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS11985 2d501db5977cda3d0e376ce7bd4de6e2 243 Gene3D G3DSA:1.10.357.10 21 186 5.1E-22 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS11985 2d501db5977cda3d0e376ce7bd4de6e2 243 SUPERFAMILY SSF48498 101 193 6.16E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RM25_RS08745 662cb9e107aa79fea7f6773941d389c9 567 Pfam PF02652 L-lactate permease 20 552 2.4E-124 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RM25_RS08745 662cb9e107aa79fea7f6773941d389c9 567 PANTHER PTHR30003 5 564 3.4E-157 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RM25_RS08745 662cb9e107aa79fea7f6773941d389c9 567 PANTHER PTHR30003:SF0 5 564 3.4E-157 T 22-04-2016 RM25_RS08745 662cb9e107aa79fea7f6773941d389c9 567 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 17 552 6.4E-123 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RM25_RS06395 5c0f6c56df2da09abf8bdb17c63352e8 304 PANTHER PTHR33969 1 270 8.4E-56 T 22-04-2016 RM25_RS06395 5c0f6c56df2da09abf8bdb17c63352e8 304 Pfam PF02616 Segregation and condensation protein ScpA 32 251 3.9E-42 T 22-04-2016 IPR003768 Segregation and condensation protein A RM25_RS06395 5c0f6c56df2da09abf8bdb17c63352e8 304 PANTHER PTHR33969:SF2 1 270 8.4E-56 T 22-04-2016 RM25_RS08730 7298687e7da2c1cd5248e173265f8003 218 Gene3D G3DSA:3.40.50.10420 38 217 1.6E-49 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RM25_RS08730 7298687e7da2c1cd5248e173265f8003 218 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 104 216 4.4E-21 T 22-04-2016 IPR003741 LUD domain RM25_RS08730 7298687e7da2c1cd5248e173265f8003 218 PANTHER PTHR32479 36 218 6.2E-29 T 22-04-2016 RM25_RS08730 7298687e7da2c1cd5248e173265f8003 218 SUPERFAMILY SSF100950 38 217 6.7E-36 T 22-04-2016 RM25_RS08730 7298687e7da2c1cd5248e173265f8003 218 PANTHER PTHR32479:SF11 36 218 6.2E-29 T 22-04-2016 RM25_RS07665 3960b46aaa3028d9d2add7df4c6a0c69 159 SUPERFAMILY SSF46785 24 153 9.26E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07665 3960b46aaa3028d9d2add7df4c6a0c69 159 PANTHER PTHR33164 14 154 2.5E-21 T 22-04-2016 RM25_RS07665 3960b46aaa3028d9d2add7df4c6a0c69 159 Gene3D G3DSA:1.10.10.10 18 151 3.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS07665 3960b46aaa3028d9d2add7df4c6a0c69 159 SMART SM00347 39 139 8.7E-23 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS07665 3960b46aaa3028d9d2add7df4c6a0c69 159 Pfam PF01047 MarR family 51 104 2.9E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS08195 2e865cb737a96480c88e82df175a5be4 354 Gene3D G3DSA:3.40.50.620 173 301 2.7E-26 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS08195 2e865cb737a96480c88e82df175a5be4 354 Pfam PF02698 DUF218 domain 175 323 7.0E-30 T 22-04-2016 IPR003848 Domain of unknown function DUF218 RM25_RS08195 2e865cb737a96480c88e82df175a5be4 354 PANTHER PTHR30336 64 299 1.2E-36 T 22-04-2016 RM25_RS08195 2e865cb737a96480c88e82df175a5be4 354 PANTHER PTHR30336:SF4 64 299 1.2E-36 T 22-04-2016 RM25_RS02125 12633d44d184d7b3c829ec65d508c8b5 448 Gene3D G3DSA:3.40.630.10 359 447 8.1E-59 T 22-04-2016 RM25_RS02125 12633d44d184d7b3c829ec65d508c8b5 448 Gene3D G3DSA:3.40.630.10 8 192 8.1E-59 T 22-04-2016 RM25_RS02125 12633d44d184d7b3c829ec65d508c8b5 448 SUPERFAMILY SSF53187 8 198 1.48E-58 T 22-04-2016 RM25_RS02125 12633d44d184d7b3c829ec65d508c8b5 448 SUPERFAMILY SSF53187 360 447 1.48E-58 T 22-04-2016 RM25_RS02125 12633d44d184d7b3c829ec65d508c8b5 448 PANTHER PTHR11014 7 448 1.6E-106 T 22-04-2016 RM25_RS02125 12633d44d184d7b3c829ec65d508c8b5 448 Pfam PF01546 Peptidase family M20/M25/M40 87 443 9.4E-34 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RM25_RS02125 12633d44d184d7b3c829ec65d508c8b5 448 Pfam PF07687 Peptidase dimerisation domain 196 346 5.7E-17 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS02125 12633d44d184d7b3c829ec65d508c8b5 448 PANTHER PTHR11014:SF15 7 448 1.6E-106 T 22-04-2016 RM25_RS02125 12633d44d184d7b3c829ec65d508c8b5 448 Gene3D G3DSA:3.30.70.360 198 354 9.2E-37 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RM25_RS01230 3a6099072a04a07f6548280d374d6629 562 SUPERFAMILY SSF56300 78 170 3.07E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS01230 3a6099072a04a07f6548280d374d6629 562 SUPERFAMILY SSF56300 320 478 3.07E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS01230 3a6099072a04a07f6548280d374d6629 562 SUPERFAMILY SSF56300 230 257 3.07E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS01230 3a6099072a04a07f6548280d374d6629 562 Gene3D G3DSA:3.60.21.10 339 480 6.5E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS01230 3a6099072a04a07f6548280d374d6629 562 Gene3D G3DSA:3.60.21.10 230 276 6.5E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS01230 3a6099072a04a07f6548280d374d6629 562 Gene3D G3DSA:3.60.21.10 76 170 6.5E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS01230 3a6099072a04a07f6548280d374d6629 562 Pfam PF00149 Calcineurin-like phosphoesterase 209 441 9.1E-6 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 PANTHER PTHR33308:SF3 1093 1246 1.9E-21 T 22-04-2016 RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 727 777 5.5E-11 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 408 455 8.5E-12 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 302 348 4.1E-13 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 886 936 1.5E-14 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 355 402 2.4E-13 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 247 294 1.6E-13 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 461 507 3.9E-11 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 1042 1073 3.6E-7 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 675 725 1.0E-12 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 62 107 1.2E-9 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 568 614 1.1E-11 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 831 879 1.2E-7 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 780 829 5.1E-10 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 8 55 2.1E-14 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 515 561 1.6E-13 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 938 988 2.4E-12 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 992 1040 3.7E-9 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF08310 LGFP repeat 621 668 2.7E-13 T 22-04-2016 IPR013207 LGFP RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 1100 1242 8.9E-24 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 SMART SM00047 1083 1246 5.0E-27 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RM25_RS11635 ddcc4728b1bd5c399618d75e711b5166 1247 PANTHER PTHR33308 1093 1246 1.9E-21 T 22-04-2016 RM25_RS01970 02d0ab68b1d8b11e1fd3273026bd5caa 406 PANTHER PTHR30337:SF0 1 377 2.5E-70 T 22-04-2016 RM25_RS01970 02d0ab68b1d8b11e1fd3273026bd5caa 406 Gene3D G3DSA:3.60.21.10 1 292 8.9E-64 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS01970 02d0ab68b1d8b11e1fd3273026bd5caa 406 SUPERFAMILY SSF56300 1 137 4.29E-52 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS01970 02d0ab68b1d8b11e1fd3273026bd5caa 406 SUPERFAMILY SSF56300 170 335 4.29E-52 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RM25_RS01970 02d0ab68b1d8b11e1fd3273026bd5caa 406 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 271 5.0E-47 T 22-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 RM25_RS01970 02d0ab68b1d8b11e1fd3273026bd5caa 406 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 295 379 2.0E-8 T 22-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain RM25_RS01970 02d0ab68b1d8b11e1fd3273026bd5caa 406 PANTHER PTHR30337 1 377 2.5E-70 T 22-04-2016 RM25_RS01970 02d0ab68b1d8b11e1fd3273026bd5caa 406 Pfam PF00149 Calcineurin-like phosphoesterase 1 232 3.6E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RM25_RS02070 a049359ffc07eca02d164fdd587d9678 166 PANTHER PTHR38662 32 133 4.6E-19 T 22-04-2016 RM25_RS02070 a049359ffc07eca02d164fdd587d9678 166 Pfam PF02553 Cobalt transport protein component CbiN 39 106 3.3E-16 T 22-04-2016 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 UniPathway: UPA00148 RM25_RS09815 ea4f15829d573c02617460074a1712f2 272 PANTHER PTHR10108 34 251 9.5E-56 T 22-04-2016 RM25_RS09815 ea4f15829d573c02617460074a1712f2 272 PANTHER PTHR10108:SF815 34 251 9.5E-56 T 22-04-2016 RM25_RS09815 ea4f15829d573c02617460074a1712f2 272 SUPERFAMILY SSF53335 9 216 1.82E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09815 ea4f15829d573c02617460074a1712f2 272 Gene3D G3DSA:3.40.50.150 8 243 2.1E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09815 ea4f15829d573c02617460074a1712f2 272 Pfam PF08241 Methyltransferase domain 46 143 1.0E-21 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RM25_RS08935 60042e7d165db78585b216973f732881 358 Gene3D G3DSA:3.20.20.70 11 325 3.2E-66 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS08935 60042e7d165db78585b216973f732881 358 SUPERFAMILY SSF51569 9 354 5.77E-56 T 22-04-2016 RM25_RS08935 60042e7d165db78585b216973f732881 358 Pfam PF00923 Transaldolase 21 288 5.7E-36 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RM25_RS08935 60042e7d165db78585b216973f732881 358 PANTHER PTHR10683 1 284 2.3E-31 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RM25_RS08935 60042e7d165db78585b216973f732881 358 PANTHER PTHR10683:SF6 1 284 2.3E-31 T 22-04-2016 RM25_RS09395 a21c01949ccf850d696d6a8e90fc7297 386 SUPERFAMILY SSF161098 115 372 1.96E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS09395 a21c01949ccf850d696d6a8e90fc7297 386 PANTHER PTHR30425:SF0 97 386 4.4E-95 T 22-04-2016 RM25_RS09395 a21c01949ccf850d696d6a8e90fc7297 386 PANTHER PTHR30425 97 386 4.4E-95 T 22-04-2016 RM25_RS09395 a21c01949ccf850d696d6a8e90fc7297 386 Gene3D G3DSA:1.10.3720.10 111 380 1.3E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS09395 a21c01949ccf850d696d6a8e90fc7297 386 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 108 380 5.3E-86 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 RM25_RS09395 a21c01949ccf850d696d6a8e90fc7297 386 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 178 383 2.7E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS06365 52ef1b3d1b3e19ea0c0f4f82a3367168 322 PANTHER PTHR34580:SF3 1 316 5.4E-38 T 22-04-2016 RM25_RS06365 52ef1b3d1b3e19ea0c0f4f82a3367168 322 PANTHER PTHR34580 1 316 5.4E-38 T 22-04-2016 RM25_RS06365 52ef1b3d1b3e19ea0c0f4f82a3367168 322 Pfam PF13280 WYL domain 147 314 2.2E-22 T 22-04-2016 IPR026881 WYL domain RM25_RS11660 aea540c58b8b7e11921b3c571913b28f 289 Pfam PF07853 Protein of unknown function (DUF1648) 178 209 2.2E-7 T 22-04-2016 IPR012867 Domain of unknown function DUF1648 RM25_RS11660 aea540c58b8b7e11921b3c571913b28f 289 Pfam PF13630 SdpI/YhfL protein family 27 99 1.4E-15 T 22-04-2016 IPR025962 SdpI/YhfL protein family RM25_RS02760 de7f11b94221ade861d16b5c24da14cc 128 Pfam PF08044 Domain of unknown function (DUF1707) 18 68 5.7E-11 T 22-04-2016 IPR012551 Protein of unknown function DUF1707 RM25_RS07740 86b99ae01e6b950cde8456fd7f8df85b 798 PANTHER PTHR30252:SF3 40 436 0.0 T 22-04-2016 RM25_RS07740 86b99ae01e6b950cde8456fd7f8df85b 798 PANTHER PTHR30252:SF3 470 746 0.0 T 22-04-2016 RM25_RS07740 86b99ae01e6b950cde8456fd7f8df85b 798 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 535 662 1.4E-29 T 22-04-2016 IPR025299 CstA, C-terminal domain RM25_RS07740 86b99ae01e6b950cde8456fd7f8df85b 798 Pfam PF02554 Carbon starvation protein CstA 67 436 9.7E-157 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 RM25_RS07740 86b99ae01e6b950cde8456fd7f8df85b 798 PANTHER PTHR30252 40 436 0.0 T 22-04-2016 RM25_RS07740 86b99ae01e6b950cde8456fd7f8df85b 798 PANTHER PTHR30252 470 746 0.0 T 22-04-2016 RM25_RS06965 1ae371ec328ccce23338f3d9ab07725d 116 SUPERFAMILY SSF117916 15 110 1.14E-27 T 22-04-2016 RM25_RS06965 1ae371ec328ccce23338f3d9ab07725d 116 PANTHER PTHR13696 12 116 2.6E-19 T 22-04-2016 RM25_RS06965 1ae371ec328ccce23338f3d9ab07725d 116 PANTHER PTHR13696:SF62 12 116 2.6E-19 T 22-04-2016 RM25_RS06965 1ae371ec328ccce23338f3d9ab07725d 116 Pfam PF01883 Domain of unknown function DUF59 18 89 2.1E-19 T 22-04-2016 IPR002744 Domain of unknown function DUF59 RM25_RS10400 18f030393143b2084fed727b86149cee 326 SUPERFAMILY SSF53271 69 302 4.64E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS10400 18f030393143b2084fed727b86149cee 326 PANTHER PTHR10210 2 315 2.4E-128 T 22-04-2016 RM25_RS10400 18f030393143b2084fed727b86149cee 326 Pfam PF14572 Phosphoribosyl synthetase-associated domain 203 309 3.8E-18 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RM25_RS10400 18f030393143b2084fed727b86149cee 326 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 310 9.1E-99 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RM25_RS10400 18f030393143b2084fed727b86149cee 326 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 120 1.0E-37 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RM25_RS10400 18f030393143b2084fed727b86149cee 326 Gene3D G3DSA:3.40.50.2020 2 158 5.9E-61 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS10400 18f030393143b2084fed727b86149cee 326 SMART SM01400 4 120 3.9E-58 T 22-04-2016 RM25_RS10400 18f030393143b2084fed727b86149cee 326 PANTHER PTHR10210:SF41 2 315 2.4E-128 T 22-04-2016 RM25_RS10400 18f030393143b2084fed727b86149cee 326 Gene3D G3DSA:3.40.50.2020 159 279 1.1E-35 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS11590 e2418b9e70443cc500ed8b1055dd0e65 279 SUPERFAMILY SSF52540 20 274 1.39E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11590 e2418b9e70443cc500ed8b1055dd0e65 279 Pfam PF13614 AAA domain 22 198 5.1E-56 T 22-04-2016 IPR025669 AAA domain RM25_RS11590 e2418b9e70443cc500ed8b1055dd0e65 279 PANTHER PTHR13696:SF52 20 278 3.3E-83 T 22-04-2016 RM25_RS11590 e2418b9e70443cc500ed8b1055dd0e65 279 PANTHER PTHR13696 20 278 3.3E-83 T 22-04-2016 RM25_RS11590 e2418b9e70443cc500ed8b1055dd0e65 279 Gene3D G3DSA:3.40.50.300 21 276 2.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS10945 7eec0d446ee787763b3d2014baa1fb00 238 Pfam PF08021 Siderophore-interacting FAD-binding domain 42 99 3.4E-9 T 22-04-2016 IPR013113 FAD-binding 9, siderophore-interacting RM25_RS10945 7eec0d446ee787763b3d2014baa1fb00 238 Gene3D G3DSA:2.40.30.10 4 99 1.9E-15 T 22-04-2016 RM25_RS10945 7eec0d446ee787763b3d2014baa1fb00 238 SUPERFAMILY SSF63380 15 109 1.8E-8 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RM25_RS10945 7eec0d446ee787763b3d2014baa1fb00 238 Gene3D G3DSA:3.40.50.80 113 227 4.5E-18 T 22-04-2016 RM25_RS10945 7eec0d446ee787763b3d2014baa1fb00 238 PANTHER PTHR30157 49 233 1.1E-20 T 22-04-2016 RM25_RS10945 7eec0d446ee787763b3d2014baa1fb00 238 Pfam PF04954 Siderophore-interacting protein 117 223 4.3E-15 T 22-04-2016 IPR007037 Siderophore-interacting protein RM25_RS02010 e52fc4adb756833beed65d802b2e69fd 124 Gene3D G3DSA:3.10.450.50 25 120 1.7E-14 T 22-04-2016 IPR032710 NTF2-like domain RM25_RS02010 e52fc4adb756833beed65d802b2e69fd 124 Pfam PF12680 SnoaL-like domain 25 116 1.1E-9 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RM25_RS02010 e52fc4adb756833beed65d802b2e69fd 124 SUPERFAMILY SSF54427 11 124 2.72E-17 T 22-04-2016 IPR032710 NTF2-like domain RM25_RS06195 5382a6e778e745a676dfa1ea90c233af 262 SMART SM00382 32 218 3.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS06195 5382a6e778e745a676dfa1ea90c233af 262 Gene3D G3DSA:3.40.50.300 3 224 2.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06195 5382a6e778e745a676dfa1ea90c233af 262 SUPERFAMILY SSF52540 6 224 6.96E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06195 5382a6e778e745a676dfa1ea90c233af 262 Pfam PF00005 ABC transporter 25 169 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS06195 5382a6e778e745a676dfa1ea90c233af 262 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS06195 5382a6e778e745a676dfa1ea90c233af 262 PANTHER PTHR24220 9 224 5.8E-65 T 22-04-2016 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 Gene3D G3DSA:2.20.28.20 143 174 3.6E-19 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 SUPERFAMILY SSF57770 140 174 3.14E-12 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 SUPERFAMILY SSF52374 5 139 2.06E-91 T 22-04-2016 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 SUPERFAMILY SSF52374 174 400 2.06E-91 T 22-04-2016 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 527 2.3E-148 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 Pfam PF08264 Anticodon-binding domain of tRNA 433 527 8.8E-9 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 PANTHER PTHR11946:SF86 5 525 1.5E-184 T 22-04-2016 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 PANTHER PTHR11946:SF86 560 596 1.5E-184 T 22-04-2016 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 594 37.974 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 Gene3D G3DSA:3.40.50.620 181 395 1.0E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 Gene3D G3DSA:3.40.50.620 5 142 1.0E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 PANTHER PTHR11946 5 525 1.5E-184 T 22-04-2016 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 PANTHER PTHR11946 560 596 1.5E-184 T 22-04-2016 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 Gene3D G3DSA:1.10.730.10 396 583 6.0E-49 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 Pfam PF09334 tRNA synthetases class I (M) 6 412 2.1E-143 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 2.1E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 PRINTS PR01041 Methionyl-tRNA synthetase signature 293 308 2.1E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 PRINTS PR01041 Methionyl-tRNA synthetase signature 400 411 2.1E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 PRINTS PR01041 Methionyl-tRNA synthetase signature 253 264 2.1E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 2.1E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 2.1E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 SUPERFAMILY SSF47323 557 583 1.68E-32 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS03230 8bdcce8dbe6438a2e8650fc29797bbfd 597 SUPERFAMILY SSF47323 401 528 1.68E-32 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RM25_RS04215 0af80e6145b3c6f1d3da40834de5ea00 354 PANTHER PTHR11835 10 350 4.1E-161 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RM25_RS04215 0af80e6145b3c6f1d3da40834de5ea00 354 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RM25_RS04215 0af80e6145b3c6f1d3da40834de5ea00 354 PANTHER PTHR11835:SF49 10 350 4.1E-161 T 22-04-2016 RM25_RS04215 0af80e6145b3c6f1d3da40834de5ea00 354 SMART SM01329 9 349 8.0E-155 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RM25_RS04215 0af80e6145b3c6f1d3da40834de5ea00 354 Gene3D G3DSA:3.40.718.10 10 347 6.4E-112 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RM25_RS04215 0af80e6145b3c6f1d3da40834de5ea00 354 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 10 335 5.8E-90 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RM25_RS04215 0af80e6145b3c6f1d3da40834de5ea00 354 SUPERFAMILY SSF53659 5 353 9.44E-106 T 22-04-2016 RM25_RS03175 84d612f00d6c34f4961e3d617795c86b 328 SUPERFAMILY SSF51735 3 154 1.12E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS03175 84d612f00d6c34f4961e3d617795c86b 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 148 1.9E-32 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RM25_RS03175 84d612f00d6c34f4961e3d617795c86b 328 PIRSF PIRSF000102 2 327 1.3E-61 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RM25_RS03175 84d612f00d6c34f4961e3d617795c86b 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 326 52.983 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RM25_RS03175 84d612f00d6c34f4961e3d617795c86b 328 PANTHER PTHR23382 5 327 7.8E-191 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RM25_RS03175 84d612f00d6c34f4961e3d617795c86b 328 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 155 167 - T 22-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 RM25_RS03175 84d612f00d6c34f4961e3d617795c86b 328 SUPERFAMILY SSF56327 156 323 2.01E-61 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RM25_RS03175 84d612f00d6c34f4961e3d617795c86b 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 156 321 4.0E-36 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RM25_RS03175 84d612f00d6c34f4961e3d617795c86b 328 Gene3D G3DSA:3.90.110.10 155 325 3.9E-74 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RM25_RS03175 84d612f00d6c34f4961e3d617795c86b 328 Gene3D G3DSA:3.40.50.720 4 153 6.3E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS03175 84d612f00d6c34f4961e3d617795c86b 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 321 1.8E-143 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RM25_RS09830 141f28ea115f793b7cc29ed9691760b7 110 Pfam PF01402 Ribbon-helix-helix protein, copG family 66 102 3.6E-6 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 RM25_RS09830 141f28ea115f793b7cc29ed9691760b7 110 SUPERFAMILY SSF47598 66 103 4.82E-6 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RM25_RS03445 6a984fcd98bf439242176ecc9a402c34 146 Pfam PF06262 Zinicin-like metallopeptidase 58 140 1.4E-9 T 22-04-2016 IPR010428 Zinicin-like metallopeptidase RM25_RS03445 6a984fcd98bf439242176ecc9a402c34 146 SUPERFAMILY SSF55486 37 142 1.54E-16 T 22-04-2016 RM25_RS11955 7b9c7ece2b682bcb4ba1b7d2e05b4998 87 SUPERFAMILY SSF51261 6 50 1.2E-10 T 22-04-2016 IPR011055 Duplicated hybrid motif RM25_RS11955 7b9c7ece2b682bcb4ba1b7d2e05b4998 87 Pfam PF01551 Peptidase family M23 6 54 1.3E-9 T 22-04-2016 IPR016047 Peptidase M23 RM25_RS11955 7b9c7ece2b682bcb4ba1b7d2e05b4998 87 Gene3D G3DSA:2.70.70.10 6 55 2.7E-12 T 22-04-2016 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 Hamap MF_01977 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 1 398 63.332 T 22-04-2016 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042|UniPathway: UPA00109 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 PANTHER PTHR13697:SF30 227 401 1.1E-163 T 22-04-2016 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 PANTHER PTHR13697:SF30 2 207 1.1E-163 T 22-04-2016 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 SUPERFAMILY SSF53784 3 399 7.85E-78 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 Pfam PF00365 Phosphofructokinase 4 346 4.6E-34 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 Gene3D G3DSA:3.40.50.450 3 257 1.0E-50 T 22-04-2016 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 PIRSF PIRSF036484 1 404 1.7E-226 T 22-04-2016 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042|UniPathway: UPA00109 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 PANTHER PTHR13697 227 401 1.1E-163 T 22-04-2016 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 PANTHER PTHR13697 2 207 1.1E-163 T 22-04-2016 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 111 127 6.3E-15 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 183 199 6.3E-15 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 6.3E-15 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS04860 a3262ecde262a4ed0a991392348a2368 404 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 144 161 6.3E-15 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RM25_RS10250 4330b728a201d2eafcdae7a35ff999d8 498 PANTHER PTHR33744 2 490 1.1E-20 T 22-04-2016 RM25_RS10250 4330b728a201d2eafcdae7a35ff999d8 498 Gene3D G3DSA:1.10.10.60 432 456 3.3E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS10250 4330b728a201d2eafcdae7a35ff999d8 498 Pfam PF13556 PucR C-terminal helix-turn-helix domain 422 479 2.0E-17 T 22-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain RM25_RS10250 4330b728a201d2eafcdae7a35ff999d8 498 PANTHER PTHR33744:SF3 2 490 1.1E-20 T 22-04-2016 RM25_RS10250 4330b728a201d2eafcdae7a35ff999d8 498 Pfam PF07905 Purine catabolism regulatory protein-like family 7 133 1.5E-24 T 22-04-2016 IPR012914 Purine catabolism PurC-like domain RM25_RS04615 50988e9a38b8f2aa86551958e852d313 291 SUPERFAMILY SSF52540 79 254 4.52E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04615 50988e9a38b8f2aa86551958e852d313 291 PANTHER PTHR34383 6 289 3.1E-92 T 22-04-2016 RM25_RS04615 50988e9a38b8f2aa86551958e852d313 291 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 69 270 1.3E-65 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related RM25_RS04615 50988e9a38b8f2aa86551958e852d313 291 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 25 284 1.2E-97 T 22-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 RM25_RS04615 50988e9a38b8f2aa86551958e852d313 291 Gene3D G3DSA:3.40.50.300 38 288 3.8E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11690 082cab26154de07ea9e03f35e3d0fe9d 344 Pfam PF16154 Domain of unknown function (DUF4862) 31 327 5.4E-99 T 22-04-2016 IPR032344 Protein of unknown function DUF4862 RM25_RS06330 e4e77e88559927c226bc73d74871f58a 109 Gene3D G3DSA:3.30.70.900 1 91 3.9E-24 T 22-04-2016 RM25_RS06330 e4e77e88559927c226bc73d74871f58a 109 SUPERFAMILY SSF54909 1 93 9.06E-28 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RM25_RS06330 e4e77e88559927c226bc73d74871f58a 109 PANTHER PTHR33336 1 103 6.1E-23 T 22-04-2016 RM25_RS06330 e4e77e88559927c226bc73d74871f58a 109 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 8.7E-19 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RM25_RS07320 0ae111e3e8b701fe9ddd34de7e909667 736 PANTHER PTHR11070 442 720 1.3E-120 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS07320 0ae111e3e8b701fe9ddd34de7e909667 736 PANTHER PTHR11070 99 363 1.3E-120 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS07320 0ae111e3e8b701fe9ddd34de7e909667 736 Pfam PF00580 UvrD/REP helicase N-terminal domain 504 558 2.3E-7 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RM25_RS07320 0ae111e3e8b701fe9ddd34de7e909667 736 Gene3D G3DSA:3.40.50.300 189 298 6.6E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07320 0ae111e3e8b701fe9ddd34de7e909667 736 Gene3D G3DSA:3.40.50.300 493 587 6.6E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07320 0ae111e3e8b701fe9ddd34de7e909667 736 Pfam PF13245 Part of AAA domain 204 276 2.2E-14 T 22-04-2016 RM25_RS07320 0ae111e3e8b701fe9ddd34de7e909667 736 PANTHER PTHR11070:SF25 442 720 1.3E-120 T 22-04-2016 RM25_RS07320 0ae111e3e8b701fe9ddd34de7e909667 736 SUPERFAMILY SSF52540 497 718 4.53E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07320 0ae111e3e8b701fe9ddd34de7e909667 736 SUPERFAMILY SSF52540 189 268 4.53E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07320 0ae111e3e8b701fe9ddd34de7e909667 736 SUPERFAMILY SSF52540 326 366 4.53E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07320 0ae111e3e8b701fe9ddd34de7e909667 736 Gene3D G3DSA:3.40.50.300 588 718 6.3E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07320 0ae111e3e8b701fe9ddd34de7e909667 736 PANTHER PTHR11070:SF25 99 363 1.3E-120 T 22-04-2016 RM25_RS05405 51f6fa5313a6f7f792162973e48fdabb 423 Gene3D G3DSA:3.40.50.1820 166 419 1.5E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS05405 51f6fa5313a6f7f792162973e48fdabb 423 SUPERFAMILY SSF53474 182 417 2.05E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS05405 51f6fa5313a6f7f792162973e48fdabb 423 Pfam PF00756 Putative esterase 184 382 2.3E-13 T 22-04-2016 IPR000801 Putative esterase RM25_RS04685 ce57e3530360382709f7a17fbd412188 110 Pfam PF06947 Protein of unknown function (DUF1290) 21 108 1.4E-31 T 22-04-2016 IPR009709 Protein of unknown function DUF1290 RM25_RS04685 ce57e3530360382709f7a17fbd412188 110 PIRSF PIRSF018579 1 110 2.3E-41 T 22-04-2016 IPR009709 Protein of unknown function DUF1290 RM25_RS11330 0dd3c3c08e6d472deb571b106a049a23 652 SUPERFAMILY SSF51905 51 249 4.78E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS11330 0dd3c3c08e6d472deb571b106a049a23 652 Pfam PF13454 FAD-NAD(P)-binding 19 192 2.8E-23 T 22-04-2016 RM25_RS11330 0dd3c3c08e6d472deb571b106a049a23 652 Gene3D G3DSA:3.50.50.60 17 193 7.2E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS02075 2a421e40dd13f8fca4ae4f6cc0c3e0b7 235 PANTHER PTHR34229:SF2 2 217 4.5E-91 T 22-04-2016 RM25_RS02075 2a421e40dd13f8fca4ae4f6cc0c3e0b7 235 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 1 215 26.011 T 22-04-2016 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 UniPathway: UPA00148 RM25_RS02075 2a421e40dd13f8fca4ae4f6cc0c3e0b7 235 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 208 4.0E-44 T 22-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 RM25_RS02075 2a421e40dd13f8fca4ae4f6cc0c3e0b7 235 PANTHER PTHR34229 2 217 4.5E-91 T 22-04-2016 RM25_RS02075 2a421e40dd13f8fca4ae4f6cc0c3e0b7 235 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 1 208 2.3E-77 T 22-04-2016 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 UniPathway: UPA00148 RM25_RS06875 c5fa7d8c609efb24abb08338f1f3ab1d 281 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 237 263 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 RM25_RS06875 c5fa7d8c609efb24abb08338f1f3ab1d 281 Pfam PF01148 Cytidylyltransferase family 15 278 1.3E-55 T 22-04-2016 RM25_RS06875 c5fa7d8c609efb24abb08338f1f3ab1d 281 PANTHER PTHR13773 1 280 3.5E-69 T 22-04-2016 RM25_RS06875 c5fa7d8c609efb24abb08338f1f3ab1d 281 PANTHER PTHR13773:SF0 1 280 3.5E-69 T 22-04-2016 RM25_RS04870 a7b84a4f77a5918338e49fd15e67b1eb 205 PANTHER PTHR17490:SF7 1 199 7.7E-69 T 22-04-2016 RM25_RS04870 a7b84a4f77a5918338e49fd15e67b1eb 205 Gene3D G3DSA:3.90.870.10 3 202 1.1E-55 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RM25_RS04870 a7b84a4f77a5918338e49fd15e67b1eb 205 SUPERFAMILY SSF55821 1 202 1.07E-54 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RM25_RS04870 a7b84a4f77a5918338e49fd15e67b1eb 205 Pfam PF01300 Telomere recombination 23 197 1.2E-39 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RM25_RS04870 a7b84a4f77a5918338e49fd15e67b1eb 205 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 3.9E-50 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RM25_RS04870 a7b84a4f77a5918338e49fd15e67b1eb 205 PANTHER PTHR17490 1 199 7.7E-69 T 22-04-2016 RM25_RS05610 8977020ec574a4920fef674854816d7c 378 ProSitePatterns PS01348 MraY family signature 2. 155 166 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS05610 8977020ec574a4920fef674854816d7c 378 Pfam PF00953 Glycosyl transferase family 4 81 241 2.0E-32 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS05610 8977020ec574a4920fef674854816d7c 378 PANTHER PTHR22926 268 378 1.8E-75 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS05610 8977020ec574a4920fef674854816d7c 378 PANTHER PTHR22926 1 251 1.8E-75 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RM25_RS05610 8977020ec574a4920fef674854816d7c 378 PANTHER PTHR22926:SF3 268 378 1.8E-75 T 22-04-2016 RM25_RS05610 8977020ec574a4920fef674854816d7c 378 PANTHER PTHR22926:SF3 1 251 1.8E-75 T 22-04-2016 RM25_RS08450 f225d29eab3b2748d2356202f54a2223 146 SUPERFAMILY SSF50249 9 133 2.16E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS08450 f225d29eab3b2748d2356202f54a2223 146 Pfam PF00436 Single-strand binding protein family 8 104 3.7E-7 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RM25_RS08450 f225d29eab3b2748d2356202f54a2223 146 Gene3D G3DSA:2.40.50.140 8 112 2.7E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS08100 1ea31d3e2e3bcab7a1729d8cc2346947 147 Pfam PF04977 Septum formation initiator 8 85 2.0E-19 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 RM25_RS05800 afeafd2513fdba467f61620dd5aaaf07 454 PANTHER PTHR11851 26 411 7.5E-34 T 22-04-2016 RM25_RS05800 afeafd2513fdba467f61620dd5aaaf07 454 PANTHER PTHR11851:SF140 26 411 7.5E-34 T 22-04-2016 RM25_RS05800 afeafd2513fdba467f61620dd5aaaf07 454 Pfam PF00675 Insulinase (Peptidase family M16) 55 154 6.0E-7 T 22-04-2016 IPR011765 Peptidase M16, N-terminal RM25_RS05800 afeafd2513fdba467f61620dd5aaaf07 454 SUPERFAMILY SSF63411 22 229 1.5E-29 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RM25_RS05800 afeafd2513fdba467f61620dd5aaaf07 454 SUPERFAMILY SSF63411 246 433 1.27E-22 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RM25_RS05800 afeafd2513fdba467f61620dd5aaaf07 454 Gene3D G3DSA:3.30.830.10 246 416 2.2E-14 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RM25_RS05800 afeafd2513fdba467f61620dd5aaaf07 454 Pfam PF05193 Peptidase M16 inactive domain 187 362 2.9E-17 T 22-04-2016 IPR007863 Peptidase M16, C-terminal RM25_RS05800 afeafd2513fdba467f61620dd5aaaf07 454 Gene3D G3DSA:3.30.830.10 23 230 1.0E-25 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RM25_RS02380 0e674ca871fc01f13ad2dc1d3f13a02e 289 PANTHER PTHR33269 6 200 3.0E-53 T 22-04-2016 RM25_RS02380 0e674ca871fc01f13ad2dc1d3f13a02e 289 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 23 168 3.9E-30 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 RM25_RS02380 0e674ca871fc01f13ad2dc1d3f13a02e 289 PANTHER PTHR33269:SF1 6 200 3.0E-53 T 22-04-2016 RM25_RS03430 aa3057c9e64dd91d38d13818e7759ba7 86 PANTHER PTHR38839:SF4 8 82 1.4E-42 T 22-04-2016 RM25_RS03430 aa3057c9e64dd91d38d13818e7759ba7 86 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 85 16.576 T 22-04-2016 IPR003482 Transcription factor WhiB RM25_RS03430 aa3057c9e64dd91d38d13818e7759ba7 86 Pfam PF02467 Transcription factor WhiB 18 81 1.6E-28 T 22-04-2016 IPR003482 Transcription factor WhiB RM25_RS03430 aa3057c9e64dd91d38d13818e7759ba7 86 PANTHER PTHR38839 8 82 1.4E-42 T 22-04-2016 RM25_RS08175 7b77e498b6735818709c54364f445b69 309 Pfam PF01026 TatD related DNase 30 278 1.0E-55 T 22-04-2016 IPR001130 TatD family GO:0016788 RM25_RS08175 7b77e498b6735818709c54364f445b69 309 Gene3D G3DSA:3.20.20.140 24 298 2.7E-70 T 22-04-2016 RM25_RS08175 7b77e498b6735818709c54364f445b69 309 SUPERFAMILY SSF51556 29 297 1.67E-62 T 22-04-2016 IPR032466 Metal-dependent hydrolase RM25_RS08175 7b77e498b6735818709c54364f445b69 309 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 30 278 9.1E-62 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 RM25_RS08175 7b77e498b6735818709c54364f445b69 309 PANTHER PTHR10060:SF20 21 301 1.0E-85 T 22-04-2016 RM25_RS08175 7b77e498b6735818709c54364f445b69 309 PIRSF PIRSF005902 6 301 9.1E-58 T 22-04-2016 IPR001130 TatD family GO:0016788 RM25_RS08175 7b77e498b6735818709c54364f445b69 309 PANTHER PTHR10060 21 301 1.0E-85 T 22-04-2016 IPR001130 TatD family GO:0016788 RM25_RS03325 8458f6a24c4b1da14913a9c17fd8c00a 166 PANTHER PTHR22769:SF37 11 152 8.1E-18 T 22-04-2016 RM25_RS03325 8458f6a24c4b1da14913a9c17fd8c00a 166 SUPERFAMILY SSF55811 16 149 4.2E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS03325 8458f6a24c4b1da14913a9c17fd8c00a 166 Gene3D G3DSA:3.90.79.10 11 151 1.0E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS03325 8458f6a24c4b1da14913a9c17fd8c00a 166 PANTHER PTHR22769 11 152 8.1E-18 T 22-04-2016 RM25_RS03325 8458f6a24c4b1da14913a9c17fd8c00a 166 Pfam PF00293 NUDIX domain 25 137 3.2E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RM25_RS05900 a505b30ed6b0c1e8155fe9821058b95c 501 Gene3D G3DSA:3.40.50.300 240 394 2.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05900 a505b30ed6b0c1e8155fe9821058b95c 501 Gene3D G3DSA:3.40.50.300 8 239 1.2E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05900 a505b30ed6b0c1e8155fe9821058b95c 501 SUPERFAMILY SSF52540 94 380 5.52E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05900 a505b30ed6b0c1e8155fe9821058b95c 501 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 173 181 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RM25_RS05900 a505b30ed6b0c1e8155fe9821058b95c 501 SMART SM00490 280 361 1.9E-38 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS05900 a505b30ed6b0c1e8155fe9821058b95c 501 Pfam PF00271 Helicase conserved C-terminal domain 252 361 2.2E-31 T 22-04-2016 IPR001650 Helicase, C-terminal RM25_RS05900 a505b30ed6b0c1e8155fe9821058b95c 501 Pfam PF00270 DEAD/DEAH box helicase 40 211 1.7E-50 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RM25_RS05900 a505b30ed6b0c1e8155fe9821058b95c 501 PANTHER PTHR24031:SF261 16 496 1.9E-177 T 22-04-2016 RM25_RS05900 a505b30ed6b0c1e8155fe9821058b95c 501 PANTHER PTHR24031 16 496 1.9E-177 T 22-04-2016 RM25_RS05900 a505b30ed6b0c1e8155fe9821058b95c 501 SMART SM00487 35 241 1.1E-54 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS04520 d5a49295081aba37bc1f1276b0554b8a 111 Gene3D G3DSA:2.40.50.140 25 110 4.1E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS04520 d5a49295081aba37bc1f1276b0554b8a 111 SUPERFAMILY SSF50249 24 109 3.6E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS11895 d68fceff348edd98c72147c8e6392337 302 SMART SM00563 58 162 6.4E-5 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RM25_RS11895 d68fceff348edd98c72147c8e6392337 302 Pfam PF01553 Acyltransferase 109 159 5.6E-6 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RM25_RS11895 d68fceff348edd98c72147c8e6392337 302 PANTHER PTHR10434 45 271 9.3E-22 T 22-04-2016 RM25_RS11895 d68fceff348edd98c72147c8e6392337 302 SUPERFAMILY SSF69593 31 237 2.48E-17 T 22-04-2016 RM25_RS11895 d68fceff348edd98c72147c8e6392337 302 PANTHER PTHR10434:SF21 45 271 9.3E-22 T 22-04-2016 RM25_RS11895 d68fceff348edd98c72147c8e6392337 302 Gene3D G3DSA:3.40.1130.10 113 220 1.4E-4 T 22-04-2016 RM25_RS03515 556ac39818da770924b132abed491d4a 407 PANTHER PTHR11236 172 404 2.8E-45 T 22-04-2016 RM25_RS03515 556ac39818da770924b132abed491d4a 407 Gene3D G3DSA:3.60.120.10 125 404 6.6E-65 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RM25_RS03515 556ac39818da770924b132abed491d4a 407 PANTHER PTHR11236:SF3 172 404 2.8E-45 T 22-04-2016 RM25_RS03515 556ac39818da770924b132abed491d4a 407 SUPERFAMILY SSF56322 29 404 2.49E-64 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RM25_RS03515 556ac39818da770924b132abed491d4a 407 Pfam PF00425 chorismate binding enzyme 146 396 5.5E-53 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RM25_RS07855 c1d8b0dded6cf119db0fa5ff20476aba 208 Pfam PF13276 HTH-like domain 52 107 3.1E-16 T 22-04-2016 IPR025948 HTH-like domain RM25_RS07855 c1d8b0dded6cf119db0fa5ff20476aba 208 PANTHER PTHR32552 5 186 1.2E-24 T 22-04-2016 RM25_RS07855 c1d8b0dded6cf119db0fa5ff20476aba 208 SUPERFAMILY SSF53098 129 185 8.16E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS07855 c1d8b0dded6cf119db0fa5ff20476aba 208 Gene3D G3DSA:3.30.420.10 129 185 2.7E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RM25_RS00560 09f2afe3ba026c9c2748906bf7c5878f 397 Gene3D G3DSA:3.40.640.10 47 256 1.4E-47 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS00560 09f2afe3ba026c9c2748906bf7c5878f 397 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 11 390 2.0E-116 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 RM25_RS00560 09f2afe3ba026c9c2748906bf7c5878f 397 SUPERFAMILY SSF53383 10 392 3.46E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS00560 09f2afe3ba026c9c2748906bf7c5878f 397 PANTHER PTHR11751:SF21 7 392 6.6E-101 T 22-04-2016 RM25_RS00560 09f2afe3ba026c9c2748906bf7c5878f 397 PANTHER PTHR11751 7 392 6.6E-101 T 22-04-2016 RM25_RS00560 09f2afe3ba026c9c2748906bf7c5878f 397 Pfam PF00155 Aminotransferase class I and II 47 386 1.2E-33 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RM25_RS00560 09f2afe3ba026c9c2748906bf7c5878f 397 Gene3D G3DSA:3.90.1150.10 257 392 8.7E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS11615 ec2303aaee71dcd90a09e8bbcfa91df4 82 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 23.236 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RM25_RS11615 ec2303aaee71dcd90a09e8bbcfa91df4 82 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 70 2.2E-24 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RM25_RS11615 ec2303aaee71dcd90a09e8bbcfa91df4 82 PANTHER PTHR33383 1 69 1.9E-33 T 22-04-2016 RM25_RS11615 ec2303aaee71dcd90a09e8bbcfa91df4 82 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 3.0E-18 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RM25_RS11615 ec2303aaee71dcd90a09e8bbcfa91df4 82 Pfam PF01809 Haemolytic domain 4 68 1.5E-26 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RM25_RS11615 ec2303aaee71dcd90a09e8bbcfa91df4 82 SMART SM01234 1 68 2.5E-38 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RM25_RS08595 97dbeae01f32d768f0962fedeca0df58 773 Pfam PF13625 Helicase conserved C-terminal domain 493 617 3.8E-31 T 22-04-2016 IPR032830 Helicase XPB/Ssl2, N-terminal domain RM25_RS04085 634e1ad401be4593e5afda0935f87cfe 293 Pfam PF11296 Protein of unknown function (DUF3097) 6 286 3.7E-110 T 22-04-2016 IPR021447 Protein of unknown function DUF3097 RM25_RS03330 fc7075d22a2040d339ba820e8516ba2c 242 Pfam PF02545 Maf-like protein 2 192 5.4E-38 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RM25_RS03330 fc7075d22a2040d339ba820e8516ba2c 242 Gene3D G3DSA:3.90.950.10 2 198 4.5E-52 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RM25_RS03330 fc7075d22a2040d339ba820e8516ba2c 242 SUPERFAMILY SSF52972 2 193 1.31E-44 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RM25_RS03330 fc7075d22a2040d339ba820e8516ba2c 242 Hamap MF_00528 Septum formation protein Maf [maf]. 2 198 23.944 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RM25_RS04665 ee7b751db034d8ff27d3fed084a85757 280 PANTHER PTHR30606 1 276 3.0E-23 T 22-04-2016 RM25_RS04665 ee7b751db034d8ff27d3fed084a85757 280 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 62 276 7.1E-18 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RM25_RS00230 b6b62989afc6eeef438260459994d09a 95 Gene3D G3DSA:3.30.70.100 10 95 1.1E-28 T 22-04-2016 RM25_RS00230 b6b62989afc6eeef438260459994d09a 95 Pfam PF00708 Acylphosphatase 10 94 3.6E-24 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RM25_RS00230 b6b62989afc6eeef438260459994d09a 95 PANTHER PTHR10029 11 95 3.8E-22 T 22-04-2016 RM25_RS00230 b6b62989afc6eeef438260459994d09a 95 ProSitePatterns PS00151 Acylphosphatase signature 2. 39 55 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RM25_RS00230 b6b62989afc6eeef438260459994d09a 95 PRINTS PR00112 Acylphosphatase signature 31 56 1.4E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RM25_RS00230 b6b62989afc6eeef438260459994d09a 95 PRINTS PR00112 Acylphosphatase signature 10 25 1.4E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RM25_RS00230 b6b62989afc6eeef438260459994d09a 95 SUPERFAMILY SSF54975 9 95 8.5E-27 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RM25_RS05350 2e6900ebd2825752f7131b85a1f31353 234 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 216 9.9E-70 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RM25_RS05350 2e6900ebd2825752f7131b85a1f31353 234 Gene3D G3DSA:3.40.1190.20 1 217 2.5E-62 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS05350 2e6900ebd2825752f7131b85a1f31353 234 Pfam PF08543 Phosphomethylpyrimidine kinase 91 183 2.9E-11 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 RM25_RS05350 2e6900ebd2825752f7131b85a1f31353 234 SUPERFAMILY SSF53613 1 217 2.95E-50 T 22-04-2016 IPR029056 Ribokinase-like RM25_RS05350 2e6900ebd2825752f7131b85a1f31353 234 PANTHER PTHR10534 1 218 2.8E-76 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RM25_RS10505 bc74e2ccf0ea91c58a3159a9ff81f901 250 SUPERFAMILY SSF51351 2 240 1.57E-65 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RM25_RS10505 bc74e2ccf0ea91c58a3159a9ff81f901 250 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 241 29.211 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RM25_RS10505 bc74e2ccf0ea91c58a3159a9ff81f901 250 Pfam PF00121 Triosephosphate isomerase 3 236 6.6E-60 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RM25_RS10505 bc74e2ccf0ea91c58a3159a9ff81f901 250 Gene3D G3DSA:3.20.20.70 3 239 2.5E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RM25_RS10505 bc74e2ccf0ea91c58a3159a9ff81f901 250 PANTHER PTHR21139:SF2 4 228 1.3E-68 T 22-04-2016 RM25_RS10505 bc74e2ccf0ea91c58a3159a9ff81f901 250 PANTHER PTHR21139 4 228 1.3E-68 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RM25_RS00315 28153892fc50a709b7c37ad2a718e870 332 PANTHER PTHR10366 3 332 1.9E-173 T 22-04-2016 RM25_RS00315 28153892fc50a709b7c37ad2a718e870 332 SUPERFAMILY SSF51735 1 322 9.65E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00315 28153892fc50a709b7c37ad2a718e870 332 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 301 9.4E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00315 28153892fc50a709b7c37ad2a718e870 332 PANTHER PTHR10366:SF437 3 332 1.9E-173 T 22-04-2016 RM25_RS00315 28153892fc50a709b7c37ad2a718e870 332 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 318 9.8E-138 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RM25_RS00315 28153892fc50a709b7c37ad2a718e870 332 Gene3D G3DSA:3.40.50.720 1 180 1.4E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS00315 28153892fc50a709b7c37ad2a718e870 332 Gene3D G3DSA:3.90.25.10 181 321 1.1E-48 T 22-04-2016 RM25_RS07295 dadb48a778bd19ed147b91bf81f0fd24 145 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 1.4E-15 T 22-04-2016 IPR020603 MraZ domain RM25_RS07295 dadb48a778bd19ed147b91bf81f0fd24 145 Pfam PF02381 MraZ protein, putative antitoxin-like 74 133 7.2E-14 T 22-04-2016 IPR020603 MraZ domain RM25_RS07295 dadb48a778bd19ed147b91bf81f0fd24 145 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 138 8.0E-38 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RM25_RS07295 dadb48a778bd19ed147b91bf81f0fd24 145 SUPERFAMILY SSF89447 1 136 8.63E-44 T 22-04-2016 RM25_RS07295 dadb48a778bd19ed147b91bf81f0fd24 145 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 123 2.0E-49 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RM25_RS07295 dadb48a778bd19ed147b91bf81f0fd24 145 PANTHER PTHR34701 2 145 6.5E-49 T 22-04-2016 RM25_RS07295 dadb48a778bd19ed147b91bf81f0fd24 145 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 145 47.238 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RM25_RS10720 2ea7e0dca33330c22ac9f27f239d3a63 140 Gene3D G3DSA:3.30.420.40 18 108 5.4E-13 T 22-04-2016 RM25_RS10720 2ea7e0dca33330c22ac9f27f239d3a63 140 SUPERFAMILY SSF53067 20 108 8.58E-11 T 22-04-2016 RM25_RS10720 2ea7e0dca33330c22ac9f27f239d3a63 140 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 20 107 1.3E-6 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RM25_RS09300 acd0d42ae9aa0108f5362d488864ab7c 158 Pfam PF00746 Gram positive anchor 115 149 1.9E-4 T 22-04-2016 IPR019948 Gram-positive anchor RM25_RS09300 acd0d42ae9aa0108f5362d488864ab7c 158 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 120 151 1.7E-6 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain RM25_RS07880 5aa27ace6a6c12c59f001f1de51f5614 310 Gene3D G3DSA:3.40.50.150 66 177 3.3E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS07880 5aa27ace6a6c12c59f001f1de51f5614 310 Pfam PF01555 DNA methylase 58 110 9.1E-9 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RM25_RS07880 5aa27ace6a6c12c59f001f1de51f5614 310 SUPERFAMILY SSF53335 67 133 3.49E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS03530 9cecb29690eaf2c323eb2049e81089c5 451 Gene3D G3DSA:3.20.140.10 3 368 8.3E-88 T 22-04-2016 RM25_RS03530 9cecb29690eaf2c323eb2049e81089c5 451 PANTHER PTHR11098 3 447 1.3E-172 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RM25_RS03530 9cecb29690eaf2c323eb2049e81089c5 451 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 5 416 1.5E-121 T 22-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RM25_RS03530 9cecb29690eaf2c323eb2049e81089c5 451 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 151 322 1.0E-6 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RM25_RS03530 9cecb29690eaf2c323eb2049e81089c5 451 PIRSF PIRSF000484 1 443 3.4E-98 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RM25_RS03530 9cecb29690eaf2c323eb2049e81089c5 451 SUPERFAMILY SSF51690 135 429 2.06E-79 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RM25_RS03530 9cecb29690eaf2c323eb2049e81089c5 451 SUPERFAMILY SSF54675 3 133 2.52E-38 T 22-04-2016 RM25_RS03530 9cecb29690eaf2c323eb2049e81089c5 451 PANTHER PTHR11098:SF8 3 447 1.3E-172 T 22-04-2016 RM25_RS09835 35e60fa1f8c62e106d78a8de0dc7677d 410 PANTHER PTHR38479 327 377 9.3E-18 T 22-04-2016 RM25_RS09835 35e60fa1f8c62e106d78a8de0dc7677d 410 PANTHER PTHR38479 4 294 9.3E-18 T 22-04-2016 RM25_RS09835 35e60fa1f8c62e106d78a8de0dc7677d 410 Pfam PF06224 Winged helix DNA-binding domain 37 379 3.8E-30 T 22-04-2016 IPR009351 Protein of unknown function DUF1006 RM25_RS11960 ae1808c6bb2c299e9b7d6dc92dd9bc57 182 Pfam PF08666 SAF domain 17 77 5.0E-10 T 22-04-2016 IPR013974 SAF domain RM25_RS11960 ae1808c6bb2c299e9b7d6dc92dd9bc57 182 SMART SM00858 16 78 9.3E-9 T 22-04-2016 IPR013974 SAF domain RM25_RS05695 4ab30bf53af4fb1a4470f23e0e131425 215 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 40 199 1.3E-29 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS05695 4ab30bf53af4fb1a4470f23e0e131425 215 SUPERFAMILY SSF88946 32 117 3.66E-24 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS05695 4ab30bf53af4fb1a4470f23e0e131425 215 PANTHER PTHR30173:SF9 3 206 5.9E-45 T 22-04-2016 RM25_RS05695 4ab30bf53af4fb1a4470f23e0e131425 215 Pfam PF08281 Sigma-70, region 4 144 195 7.4E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS05695 4ab30bf53af4fb1a4470f23e0e131425 215 Pfam PF04542 Sigma-70 region 2 41 104 2.9E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS05695 4ab30bf53af4fb1a4470f23e0e131425 215 Gene3D G3DSA:1.10.10.10 141 202 7.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS05695 4ab30bf53af4fb1a4470f23e0e131425 215 Gene3D G3DSA:1.10.1740.10 28 106 1.4E-27 T 22-04-2016 RM25_RS05695 4ab30bf53af4fb1a4470f23e0e131425 215 TIGRFAM TIGR02947 SigH_actino: RNA polymerase sigma-70 factor, TIGR02947 family 25 209 2.6E-103 T 22-04-2016 IPR014293 RNA polymerase sigma-70, actinobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS05695 4ab30bf53af4fb1a4470f23e0e131425 215 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 59 90 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS05695 4ab30bf53af4fb1a4470f23e0e131425 215 SUPERFAMILY SSF88659 141 199 3.27E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS05695 4ab30bf53af4fb1a4470f23e0e131425 215 PANTHER PTHR30173 3 206 5.9E-45 T 22-04-2016 RM25_RS07555 efeb6468b659abb4bf3c905e67cf8a0c 385 SUPERFAMILY SSF52540 116 373 1.45E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07555 efeb6468b659abb4bf3c905e67cf8a0c 385 PANTHER PTHR23264 3 369 2.2E-116 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RM25_RS07555 efeb6468b659abb4bf3c905e67cf8a0c 385 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 115 367 4.0E-85 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RM25_RS07555 efeb6468b659abb4bf3c905e67cf8a0c 385 SUPERFAMILY SSF117916 10 98 1.08E-22 T 22-04-2016 RM25_RS07555 efeb6468b659abb4bf3c905e67cf8a0c 385 PANTHER PTHR23264:SF19 3 369 2.2E-116 T 22-04-2016 RM25_RS07555 efeb6468b659abb4bf3c905e67cf8a0c 385 Gene3D G3DSA:3.40.50.300 104 366 3.5E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07555 efeb6468b659abb4bf3c905e67cf8a0c 385 Pfam PF01883 Domain of unknown function DUF59 11 82 5.0E-19 T 22-04-2016 IPR002744 Domain of unknown function DUF59 RM25_RS07555 efeb6468b659abb4bf3c905e67cf8a0c 385 Hamap MF_02040 Iron-sulfur cluster carrier protein. 107 369 32.761 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RM25_RS11375 d111f8b5908719c144039bd0fe22e8ae 334 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 23 294 1.0E-66 T 22-04-2016 IPR010640 Low temperature requirement A RM25_RS11375 d111f8b5908719c144039bd0fe22e8ae 334 PANTHER PTHR36840 10 294 3.6E-25 T 22-04-2016 RM25_RS00035 51d2ff0f04f53f3e62232a739b6c3735 852 Pfam PF12704 MacB-like periplasmic core domain 17 241 8.2E-9 T 22-04-2016 IPR025857 MacB-like periplasmic core domain RM25_RS00035 51d2ff0f04f53f3e62232a739b6c3735 852 Pfam PF12704 MacB-like periplasmic core domain 497 695 1.6E-11 T 22-04-2016 IPR025857 MacB-like periplasmic core domain RM25_RS00035 51d2ff0f04f53f3e62232a739b6c3735 852 Pfam PF02687 FtsX-like permease family 276 397 3.8E-25 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RM25_RS00035 51d2ff0f04f53f3e62232a739b6c3735 852 Pfam PF02687 FtsX-like permease family 729 844 8.5E-21 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RM25_RS00035 51d2ff0f04f53f3e62232a739b6c3735 852 PANTHER PTHR30489:SF9 250 852 5.0E-139 T 22-04-2016 RM25_RS00035 51d2ff0f04f53f3e62232a739b6c3735 852 PANTHER PTHR30489:SF9 1 202 5.0E-139 T 22-04-2016 RM25_RS00035 51d2ff0f04f53f3e62232a739b6c3735 852 PANTHER PTHR30489 250 852 5.0E-139 T 22-04-2016 RM25_RS00035 51d2ff0f04f53f3e62232a739b6c3735 852 PANTHER PTHR30489 1 202 5.0E-139 T 22-04-2016 RM25_RS05210 4c01e4a8d664de6ee0d011aab86c8631 418 SUPERFAMILY SSF52096 115 237 5.36E-28 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS05210 4c01e4a8d664de6ee0d011aab86c8631 418 SUPERFAMILY SSF52096 279 340 5.36E-28 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS05210 4c01e4a8d664de6ee0d011aab86c8631 418 Gene3D G3DSA:3.90.226.10 88 229 1.6E-26 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS05210 4c01e4a8d664de6ee0d011aab86c8631 418 Gene3D G3DSA:3.90.226.10 280 358 1.6E-26 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RM25_RS05210 4c01e4a8d664de6ee0d011aab86c8631 418 PANTHER PTHR33209 123 353 5.8E-33 T 22-04-2016 RM25_RS05210 4c01e4a8d664de6ee0d011aab86c8631 418 Pfam PF01343 Peptidase family S49 190 353 6.5E-22 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RM25_RS01975 1e3ad6d3d05a29e9e6cf640ee8fb5b08 346 PANTHER PTHR11409 12 340 1.3E-91 T 22-04-2016 RM25_RS01975 1e3ad6d3d05a29e9e6cf640ee8fb5b08 346 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 281 287 - T 22-04-2016 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: REACT_1698 RM25_RS01975 1e3ad6d3d05a29e9e6cf640ee8fb5b08 346 Pfam PF00962 Adenosine/AMP deaminase 12 334 3.1E-62 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 RM25_RS01975 1e3ad6d3d05a29e9e6cf640ee8fb5b08 346 SUPERFAMILY SSF51556 9 341 9.19E-64 T 22-04-2016 IPR032466 Metal-dependent hydrolase RM25_RS01975 1e3ad6d3d05a29e9e6cf640ee8fb5b08 346 Gene3D G3DSA:3.20.20.140 10 340 5.5E-78 T 22-04-2016 RM25_RS01975 1e3ad6d3d05a29e9e6cf640ee8fb5b08 346 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 12 337 7.3E-78 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 RM25_RS01975 1e3ad6d3d05a29e9e6cf640ee8fb5b08 346 PANTHER PTHR11409:SF36 12 340 1.3E-91 T 22-04-2016 RM25_RS07870 5931244e73c64df8985fa4d2ea5c6e18 164 Pfam PF01610 Transposase 2 148 3.4E-29 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RM25_RS09795 642c449109b82a553f1836408e2b1226 451 Pfam PF03796 DnaB-like helicase C terminal domain 194 447 2.7E-105 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 RM25_RS09795 642c449109b82a553f1836408e2b1226 451 Gene3D G3DSA:1.10.860.10 19 121 9.5E-37 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RM25_RS09795 642c449109b82a553f1836408e2b1226 451 PANTHER PTHR30153 3 451 3.8E-187 T 22-04-2016 RM25_RS09795 642c449109b82a553f1836408e2b1226 451 Pfam PF00772 DnaB-like helicase N terminal domain 19 120 1.8E-33 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RM25_RS09795 642c449109b82a553f1836408e2b1226 451 Gene3D G3DSA:3.40.50.300 179 450 2.4E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09795 642c449109b82a553f1836408e2b1226 451 SUPERFAMILY SSF52540 193 441 8.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS09795 642c449109b82a553f1836408e2b1226 451 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 19 450 2.6E-163 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RM25_RS09795 642c449109b82a553f1836408e2b1226 451 SMART SM00382 211 399 0.0027 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS09795 642c449109b82a553f1836408e2b1226 451 SUPERFAMILY SSF48024 17 128 1.28E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RM25_RS03670 fbf8c352fa96697c00d609f3fee27f69 271 PANTHER PTHR31126:SF21 1 94 1.8E-52 T 22-04-2016 RM25_RS03670 fbf8c352fa96697c00d609f3fee27f69 271 PANTHER PTHR31126 1 94 1.8E-52 T 22-04-2016 RM25_RS03670 fbf8c352fa96697c00d609f3fee27f69 271 SUPERFAMILY SSF52799 15 269 7.78E-52 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like RM25_RS03670 fbf8c352fa96697c00d609f3fee27f69 271 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 163 173 - T 22-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 RM25_RS03670 fbf8c352fa96697c00d609f3fee27f69 271 PANTHER PTHR31126 131 269 1.8E-52 T 22-04-2016 RM25_RS03670 fbf8c352fa96697c00d609f3fee27f69 271 PANTHER PTHR31126:SF21 131 269 1.8E-52 T 22-04-2016 RM25_RS03670 fbf8c352fa96697c00d609f3fee27f69 271 Pfam PF13350 Tyrosine phosphatase family 15 270 5.5E-67 T 22-04-2016 IPR026893 Tyrosine/serine-protein phosphatase IphP-type RM25_RS03670 fbf8c352fa96697c00d609f3fee27f69 271 Gene3D G3DSA:3.90.190.10 17 101 4.0E-22 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like RM25_RS03670 fbf8c352fa96697c00d609f3fee27f69 271 Gene3D G3DSA:3.90.190.10 139 201 4.0E-22 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like RM25_RS06405 aec7052c957810e3138400098d74f237 298 Pfam PF13614 AAA domain 44 219 2.5E-60 T 22-04-2016 IPR025669 AAA domain RM25_RS06405 aec7052c957810e3138400098d74f237 298 PANTHER PTHR13696 40 295 4.0E-88 T 22-04-2016 RM25_RS06405 aec7052c957810e3138400098d74f237 298 PANTHER PTHR13696:SF78 40 295 4.0E-88 T 22-04-2016 RM25_RS06405 aec7052c957810e3138400098d74f237 298 Gene3D G3DSA:3.40.50.300 44 294 8.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06405 aec7052c957810e3138400098d74f237 298 SUPERFAMILY SSF52540 43 292 5.33E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS06775 5e5908c5563d9c29bce30643aa848a32 176 SUPERFAMILY SSF55729 11 158 1.41E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS06775 5e5908c5563d9c29bce30643aa848a32 176 Gene3D G3DSA:3.40.630.30 10 167 5.9E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS06775 5e5908c5563d9c29bce30643aa848a32 176 Pfam PF00583 Acetyltransferase (GNAT) family 74 149 3.4E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS12095 5a7cc5d15c1b67ec444925fa847c8dfd 319 PANTHER PTHR30269 1 130 1.2E-42 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RM25_RS12095 5a7cc5d15c1b67ec444925fa847c8dfd 319 PANTHER PTHR30269 176 318 1.2E-42 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RM25_RS12095 5a7cc5d15c1b67ec444925fa847c8dfd 319 PANTHER PTHR30269:SF24 1 130 1.2E-42 T 22-04-2016 RM25_RS12095 5a7cc5d15c1b67ec444925fa847c8dfd 319 PANTHER PTHR30269:SF24 176 318 1.2E-42 T 22-04-2016 RM25_RS12095 5a7cc5d15c1b67ec444925fa847c8dfd 319 Pfam PF01925 Sulfite exporter TauE/SafE 7 315 3.6E-21 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RM25_RS00370 5ef37963a3665ff9732ed84a4f0cf538 138 SUPERFAMILY SSF52833 49 135 8.17E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS00370 5ef37963a3665ff9732ed84a4f0cf538 138 Pfam PF00085 Thioredoxin 51 133 1.5E-6 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RM25_RS00370 5ef37963a3665ff9732ed84a4f0cf538 138 Gene3D G3DSA:3.40.30.10 51 135 2.0E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS11875 e0751728acc8e250d7f9302d20480880 182 PANTHER PTHR10859 3 167 2.6E-31 T 22-04-2016 RM25_RS11875 e0751728acc8e250d7f9302d20480880 182 PANTHER PTHR10859:SF84 3 167 2.6E-31 T 22-04-2016 RM25_RS11875 e0751728acc8e250d7f9302d20480880 182 SUPERFAMILY SSF53448 3 166 4.25E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS11875 e0751728acc8e250d7f9302d20480880 182 Gene3D G3DSA:3.90.550.10 3 121 2.1E-6 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RM25_RS11875 e0751728acc8e250d7f9302d20480880 182 Pfam PF00535 Glycosyl transferase family 2 3 143 3.2E-10 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RM25_RS10230 d1b74bf7a05044a25264de35a77829f3 172 PANTHER PTHR30614 2 172 1.7E-55 T 22-04-2016 RM25_RS10230 d1b74bf7a05044a25264de35a77829f3 172 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 2 61 5.1E-17 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RM25_RS10230 d1b74bf7a05044a25264de35a77829f3 172 SUPERFAMILY SSF161098 2 155 1.1E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10230 d1b74bf7a05044a25264de35a77829f3 172 Gene3D G3DSA:1.10.3720.10 2 165 3.6E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS10230 d1b74bf7a05044a25264de35a77829f3 172 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 3 164 3.4E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS04825 d507fe61cc7298700269ef4ac4befc90 193 SUPERFAMILY SSF88659 45 85 1.18E-5 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS04825 d507fe61cc7298700269ef4ac4befc90 193 Gene3D G3DSA:1.10.10.10 36 79 9.5E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS11445 c319bbe06c4b98462a55a2f0e056e128 418 Gene3D G3DSA:1.10.3080.10 2 379 1.1E-46 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RM25_RS11445 c319bbe06c4b98462a55a2f0e056e128 418 Pfam PF00654 Voltage gated chloride channel 57 379 3.6E-51 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RM25_RS11445 c319bbe06c4b98462a55a2f0e056e128 418 SUPERFAMILY SSF81340 2 389 5.1E-56 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RM25_RS11445 c319bbe06c4b98462a55a2f0e056e128 418 PRINTS PR00762 Chloride channel signature 151 170 2.2E-8 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RM25_RS11445 c319bbe06c4b98462a55a2f0e056e128 418 PRINTS PR00762 Chloride channel signature 100 119 2.2E-8 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RM25_RS11445 c319bbe06c4b98462a55a2f0e056e128 418 PRINTS PR00762 Chloride channel signature 317 337 2.2E-8 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RM25_RS11445 c319bbe06c4b98462a55a2f0e056e128 418 PRINTS PR00762 Chloride channel signature 348 364 2.2E-8 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RM25_RS03205 1ea691764e02bf5f81639cec650b0a3a 411 Gene3D G3DSA:3.90.1200.10 209 338 3.7E-11 T 22-04-2016 RM25_RS03205 1ea691764e02bf5f81639cec650b0a3a 411 Pfam PF01636 Phosphotransferase enzyme family 171 336 2.1E-7 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RM25_RS03205 1ea691764e02bf5f81639cec650b0a3a 411 SUPERFAMILY SSF56112 165 340 1.63E-16 T 22-04-2016 IPR011009 Protein kinase-like domain RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 Gene3D G3DSA:1.10.8.280 186 303 6.2E-19 T 22-04-2016 RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 SUPERFAMILY SSF52540 20 66 4.66E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 SUPERFAMILY SSF52540 316 469 4.66E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 PANTHER PTHR32282:SF2 699 849 1.0E-230 T 22-04-2016 RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 PANTHER PTHR32282:SF2 16 673 1.0E-230 T 22-04-2016 RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 SMART SM00382 37 503 5.0 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 SMART SM00382 533 819 0.25 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 ProSitePatterns PS00211 ABC transporters family signature. 742 756 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 Gene3D G3DSA:1.20.1580.10 108 184 1.8E-29 T 22-04-2016 RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 Gene3D G3DSA:1.20.1580.10 304 376 1.8E-29 T 22-04-2016 RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 SUPERFAMILY SSF52540 703 842 4.46E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 SUPERFAMILY SSF52540 521 551 4.46E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 SUPERFAMILY SSF52540 607 671 4.46E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 PANTHER PTHR32282 699 849 1.0E-230 T 22-04-2016 RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 PANTHER PTHR32282 16 673 1.0E-230 T 22-04-2016 RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 Gene3D G3DSA:1.20.1580.10 593 732 8.6E-37 T 22-04-2016 RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 Gene3D G3DSA:3.40.50.300 519 573 3.7E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 Gene3D G3DSA:3.40.50.300 16 72 9.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 Gene3D G3DSA:3.40.50.300 733 850 3.7E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03505 5782c70c21e5c077dd82c4da3aea4c6a 856 Gene3D G3DSA:3.40.50.300 377 494 9.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11195 cbb078d84d86e652baa593fc015b3a46 79 Gene3D G3DSA:3.30.70.100 9 75 7.8E-19 T 22-04-2016 RM25_RS11195 cbb078d84d86e652baa593fc015b3a46 79 Pfam PF00403 Heavy-metal-associated domain 13 72 8.5E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RM25_RS11195 cbb078d84d86e652baa593fc015b3a46 79 SUPERFAMILY SSF55008 9 75 2.88E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RM25_RS07215 888e0627d4ecea21899a0782ab433779 318 SUPERFAMILY SSF90257 19 125 1.94E-6 T 22-04-2016 RM25_RS07215 888e0627d4ecea21899a0782ab433779 318 Gene3D G3DSA:1.20.5.170 48 86 1.1E-4 T 22-04-2016 RM25_RS09870 0a4f621e50c83366e1807b3d6f912863 256 SUPERFAMILY SSF48452 27 128 2.85E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RM25_RS09870 0a4f621e50c83366e1807b3d6f912863 256 Gene3D G3DSA:1.25.40.10 27 128 3.8E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RM25_RS09870 0a4f621e50c83366e1807b3d6f912863 256 Gene3D G3DSA:1.25.40.10 174 196 3.8E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RM25_RS06765 b0f6a171ccd8c23fed7e7878f51c171e 61 Pfam PF00830 Ribosomal L28 family 4 58 4.1E-23 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RM25_RS06765 b0f6a171ccd8c23fed7e7878f51c171e 61 Gene3D G3DSA:2.30.170.40 2 58 5.8E-22 T 22-04-2016 RM25_RS06765 b0f6a171ccd8c23fed7e7878f51c171e 61 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 1.2E-22 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06765 b0f6a171ccd8c23fed7e7878f51c171e 61 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 15.46 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RM25_RS06765 b0f6a171ccd8c23fed7e7878f51c171e 61 SUPERFAMILY SSF143800 1 59 1.47E-23 T 22-04-2016 RM25_RS04535 06922b80019990125d1b00a4aabb7efa 664 PANTHER PTHR11785:SF125 26 493 9.7E-150 T 22-04-2016 RM25_RS04535 06922b80019990125d1b00a4aabb7efa 664 Pfam PF13520 Amino acid permease 56 464 5.6E-27 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS04535 06922b80019990125d1b00a4aabb7efa 664 PANTHER PTHR11785 26 493 9.7E-150 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS01465 ea147c18275b85e5f604176bd24a1426 321 Gene3D G3DSA:3.40.190.10 59 187 8.8E-43 T 22-04-2016 RM25_RS01465 ea147c18275b85e5f604176bd24a1426 321 Pfam PF03180 NLPA lipoprotein 62 294 1.2E-67 T 22-04-2016 IPR004872 Lipoprotein NlpA family RM25_RS01465 ea147c18275b85e5f604176bd24a1426 321 PANTHER PTHR30429:SF1 28 300 1.9E-70 T 22-04-2016 RM25_RS01465 ea147c18275b85e5f604176bd24a1426 321 PANTHER PTHR30429 28 300 1.9E-70 T 22-04-2016 IPR004872 Lipoprotein NlpA family RM25_RS01465 ea147c18275b85e5f604176bd24a1426 321 SUPERFAMILY SSF53850 61 299 1.01E-68 T 22-04-2016 RM25_RS00245 fc0d5931cdee715ae00a2e90e34eebda 549 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 109 256 6.8E-8 T 22-04-2016 RM25_RS08015 9bacd24bb02d5c4b9e4f53d41e8ab8d7 134 SUPERFAMILY SSF55961 8 130 1.18E-13 T 22-04-2016 RM25_RS08015 9bacd24bb02d5c4b9e4f53d41e8ab8d7 134 Gene3D G3DSA:3.30.530.20 6 130 2.1E-12 T 22-04-2016 IPR023393 START-like domain RM25_RS00125 e0f7cb7946a0e169edb594ac01c4f758 526 Gene3D G3DSA:3.40.50.300 190 402 8.4E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00125 e0f7cb7946a0e169edb594ac01c4f758 526 Gene3D G3DSA:1.10.10.10 451 517 9.9E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS00125 e0f7cb7946a0e169edb594ac01c4f758 526 SUPERFAMILY SSF52540 213 379 1.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00125 e0f7cb7946a0e169edb594ac01c4f758 526 Pfam PF13481 AAA domain 195 368 2.7E-16 T 22-04-2016 RM25_RS05580 0333d4f667d21e98288b32778ae4e650 259 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 220 239 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 RM25_RS05580 0333d4f667d21e98288b32778ae4e650 259 PANTHER PTHR11910:SF1 101 259 5.6E-21 T 22-04-2016 RM25_RS05580 0333d4f667d21e98288b32778ae4e650 259 PANTHER PTHR11910 101 259 5.6E-21 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RM25_RS05580 0333d4f667d21e98288b32778ae4e650 259 Pfam PF00213 ATP synthase delta (OSCP) subunit 99 258 2.5E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RM25_RS04775 2c6d7ac0c8d0fcd2ed1e1477780d8791 192 SMART SM00855 7 157 6.8E-12 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS04775 2c6d7ac0c8d0fcd2ed1e1477780d8791 192 Gene3D G3DSA:3.40.50.1240 9 184 2.4E-35 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS04775 2c6d7ac0c8d0fcd2ed1e1477780d8791 192 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 187 3.5E-32 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RM25_RS04775 2c6d7ac0c8d0fcd2ed1e1477780d8791 192 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 10 19 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 RM25_RS04775 2c6d7ac0c8d0fcd2ed1e1477780d8791 192 PANTHER PTHR23029 10 187 1.0E-30 T 22-04-2016 RM25_RS04775 2c6d7ac0c8d0fcd2ed1e1477780d8791 192 SUPERFAMILY SSF53254 9 186 3.73E-36 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RM25_RS00140 54c681a545ede6715792221ea77b35f3 73 Pfam PF12728 Helix-turn-helix domain 26 71 1.9E-9 T 22-04-2016 RM25_RS00140 54c681a545ede6715792221ea77b35f3 73 Gene3D G3DSA:1.10.10.10 25 66 2.0E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS00140 54c681a545ede6715792221ea77b35f3 73 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 26 70 5.2E-10 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 RM25_RS00140 54c681a545ede6715792221ea77b35f3 73 SUPERFAMILY SSF46955 21 68 9.7E-7 T 22-04-2016 IPR009061 Putative DNA-binding domain RM25_RS05430 81c6015eec388d902bf04a8a73eaa94e 208 SUPERFAMILY SSF55021 3 73 5.5E-6 T 22-04-2016 RM25_RS04700 aa148bef1701421c45cbae2662201571 162 Pfam PF13240 zinc-ribbon domain 4 25 6.2E-8 T 22-04-2016 IPR026870 Zinc-ribbon domain RM25_RS04700 aa148bef1701421c45cbae2662201571 162 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 67 154 1.2E-19 T 22-04-2016 IPR032030 YscD, cytoplasmic domain RM25_RS04700 aa148bef1701421c45cbae2662201571 162 Gene3D G3DSA:2.60.200.20 55 154 6.1E-30 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RM25_RS04700 aa148bef1701421c45cbae2662201571 162 SMART SM00240 83 133 9.9E-15 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RM25_RS04700 aa148bef1701421c45cbae2662201571 162 ProDom PD113106 YVBI TRANSMEMBRANE MEMBRANE YEBC YBEC 2 69 0.001 T 22-04-2016 RM25_RS04700 aa148bef1701421c45cbae2662201571 162 PANTHER PTHR15715 37 148 7.8E-22 T 22-04-2016 RM25_RS04700 aa148bef1701421c45cbae2662201571 162 SUPERFAMILY SSF49879 49 157 9.18E-32 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 RM25_RS08230 93a078dc9d00c59a3d0b82ca1bb0a1b6 157 Gene3D G3DSA:3.40.630.30 48 151 4.9E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS08230 93a078dc9d00c59a3d0b82ca1bb0a1b6 157 PANTHER PTHR13947 55 147 1.0E-16 T 22-04-2016 RM25_RS08230 93a078dc9d00c59a3d0b82ca1bb0a1b6 157 Pfam PF00583 Acetyltransferase (GNAT) family 57 132 6.1E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS08230 93a078dc9d00c59a3d0b82ca1bb0a1b6 157 SUPERFAMILY SSF55729 30 140 1.23E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS05335 2bbd8f359b6f5c47ac25998668f73910 112 Pfam PF13397 RNA polymerase-binding protein 4 107 9.8E-40 T 22-04-2016 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 RM25_RS05335 2bbd8f359b6f5c47ac25998668f73910 112 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 1 110 26.345 T 22-04-2016 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 RM25_RS05335 2bbd8f359b6f5c47ac25998668f73910 112 ProSitePatterns PS00202 Rubredoxin signature. 50 60 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PIRSF PIRSF000350 1 466 6.0E-83 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 Gene3D G3DSA:3.50.50.60 140 333 6.2E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 Gene3D G3DSA:3.50.50.60 4 139 6.8E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PANTHER PTHR22912:SF125 1 459 1.2E-200 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 SUPERFAMILY SSF51905 2 336 3.56E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 464 3.3E-166 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 456 7.1E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PANTHER PTHR22912 1 459 1.2E-200 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 Gene3D G3DSA:3.30.390.30 334 463 5.7E-47 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 327 1.9E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 5.3E-35 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.3E-35 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 5.3E-35 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 5.3E-35 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 5.3E-35 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 SUPERFAMILY SSF55424 343 465 1.25E-38 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.2E-62 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 3.2E-62 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.2E-62 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 3.2E-62 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.2E-62 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.2E-62 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.2E-62 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 3.2E-62 T 22-04-2016 RM25_RS05360 9b4ef944179feb10a9ce5d66eb95adb1 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 3.2E-62 T 22-04-2016 RM25_RS03680 c5f72e8a1fb6e706e01decd0f5defa4a 168 Pfam PF13328 HD domain 18 140 2.5E-6 T 22-04-2016 IPR003607 HD/PDEase domain RM25_RS03680 c5f72e8a1fb6e706e01decd0f5defa4a 168 SUPERFAMILY SSF109604 13 154 1.64E-22 T 22-04-2016 RM25_RS03680 c5f72e8a1fb6e706e01decd0f5defa4a 168 Gene3D G3DSA:1.10.3210.10 38 151 3.6E-4 T 22-04-2016 IPR006674 HD domain RM25_RS03680 c5f72e8a1fb6e706e01decd0f5defa4a 168 SMART SM00471 33 141 2.2E-5 T 22-04-2016 IPR003607 HD/PDEase domain RM25_RS11500 5bb306844d3ac5b1577449ac1dfc7412 228 PANTHER PTHR30328:SF20 1 161 1.4E-17 T 22-04-2016 RM25_RS11500 5bb306844d3ac5b1577449ac1dfc7412 228 PANTHER PTHR30328 1 161 1.4E-17 T 22-04-2016 RM25_RS11500 5bb306844d3ac5b1577449ac1dfc7412 228 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 52 1.8E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS11500 5bb306844d3ac5b1577449ac1dfc7412 228 SUPERFAMILY SSF46689 3 65 1.9E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS11500 5bb306844d3ac5b1577449ac1dfc7412 228 Gene3D G3DSA:1.10.357.10 5 178 3.4E-14 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 SUPERFAMILY SSF51306 34 78 8.02E-44 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 SUPERFAMILY SSF51306 105 223 8.02E-44 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 21 218 1.9E-35 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 PANTHER PTHR12383:SF14 108 235 1.5E-49 T 22-04-2016 RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 PANTHER PTHR12383:SF14 12 77 1.5E-49 T 22-04-2016 RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 110 122 2.6E-20 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 36 52 2.6E-20 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 163 182 2.6E-20 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 ProSitePatterns PS00761 Signal peptidases I signature 3. 168 181 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 PANTHER PTHR12383 108 235 1.5E-49 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 PANTHER PTHR12383 12 77 1.5E-49 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 Gene3D G3DSA:2.10.109.10 32 120 3.8E-33 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 Gene3D G3DSA:2.10.109.10 163 223 3.8E-33 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RM25_RS06645 7a263ee8f4c6fce9834d6cc79832f70c 249 Pfam PF00717 Peptidase S24-like 43 135 6.2E-13 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RM25_RS01835 a2b3f4d9e73b63df748161d9a19c6c26 368 Pfam PF09972 Predicted membrane protein (DUF2207) 9 293 3.3E-23 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane RM25_RS11775 c294eeba45628d5f05a4970f6661c2f1 82 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 28 82 1.4E-18 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RM25_RS11775 c294eeba45628d5f05a4970f6661c2f1 82 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 28 80 7.9E-18 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 RM25_RS11775 c294eeba45628d5f05a4970f6661c2f1 82 Hamap MF_00422 Protein translocase subunit SecE [secE]. 24 79 12.485 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE RM25_RS11775 c294eeba45628d5f05a4970f6661c2f1 82 Gene3D G3DSA:1.20.5.1030 24 81 2.3E-20 T 22-04-2016 RM25_RS11775 c294eeba45628d5f05a4970f6661c2f1 82 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 29 57 - T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 RM25_RS07465 640a814a756aee9e4fd054ad5bc381a2 603 SUPERFAMILY SSF52540 279 490 9.91E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07465 640a814a756aee9e4fd054ad5bc381a2 603 Gene3D G3DSA:3.40.50.300 8 246 4.7E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07465 640a814a756aee9e4fd054ad5bc381a2 603 Pfam PF00005 ABC transporter 21 151 2.6E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS07465 640a814a756aee9e4fd054ad5bc381a2 603 Pfam PF00005 ABC transporter 302 442 2.5E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS07465 640a814a756aee9e4fd054ad5bc381a2 603 PANTHER PTHR19211 8 544 2.5E-242 T 22-04-2016 RM25_RS07465 640a814a756aee9e4fd054ad5bc381a2 603 SMART SM00382 311 502 3.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS07465 640a814a756aee9e4fd054ad5bc381a2 603 SMART SM00382 29 206 5.6E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS07465 640a814a756aee9e4fd054ad5bc381a2 603 Gene3D G3DSA:3.40.50.300 285 517 2.5E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07465 640a814a756aee9e4fd054ad5bc381a2 603 PANTHER PTHR19211:SF55 8 544 2.5E-242 T 22-04-2016 RM25_RS07465 640a814a756aee9e4fd054ad5bc381a2 603 SUPERFAMILY SSF52540 5 201 1.54E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS07465 640a814a756aee9e4fd054ad5bc381a2 603 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS07465 640a814a756aee9e4fd054ad5bc381a2 603 ProSitePatterns PS00211 ABC transporters family signature. 414 428 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS08190 9c3d437e1f70c272f9a34a2699cb0909 519 PANTHER PTHR10050:SF29 213 294 7.1E-31 T 22-04-2016 RM25_RS08190 9c3d437e1f70c272f9a34a2699cb0909 519 PANTHER PTHR10050:SF29 15 64 7.1E-31 T 22-04-2016 RM25_RS08190 9c3d437e1f70c272f9a34a2699cb0909 519 PANTHER PTHR10050:SF29 89 195 7.1E-31 T 22-04-2016 RM25_RS08190 9c3d437e1f70c272f9a34a2699cb0909 519 PANTHER PTHR10050 213 294 7.1E-31 T 22-04-2016 IPR027005 Glycosyltransferase 39-like RM25_RS08190 9c3d437e1f70c272f9a34a2699cb0909 519 PANTHER PTHR10050 15 64 7.1E-31 T 22-04-2016 IPR027005 Glycosyltransferase 39-like RM25_RS08190 9c3d437e1f70c272f9a34a2699cb0909 519 PANTHER PTHR10050 89 195 7.1E-31 T 22-04-2016 IPR027005 Glycosyltransferase 39-like RM25_RS08190 9c3d437e1f70c272f9a34a2699cb0909 519 Pfam PF16192 C-terminal four TMM region of protein-O-mannosyltransferase 322 518 2.8E-10 T 22-04-2016 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain KEGG: 00500+2.4.1.10|KEGG: 00514+2.4.1.109|MetaCyc: PWY-822|UniPathway: UPA00378 RM25_RS08190 9c3d437e1f70c272f9a34a2699cb0909 519 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 27 183 4.3E-12 T 22-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 RM25_RS05910 80105681d639fe9cf7e1f4440c75d580 272 PANTHER PTHR30007:SF4 1 230 1.2E-45 T 22-04-2016 RM25_RS05910 80105681d639fe9cf7e1f4440c75d580 272 SUPERFAMILY SSF89550 1 60 3.73E-28 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RM25_RS05910 80105681d639fe9cf7e1f4440c75d580 272 SUPERFAMILY SSF89550 143 236 3.73E-28 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RM25_RS05910 80105681d639fe9cf7e1f4440c75d580 272 PANTHER PTHR30007 1 230 1.2E-45 T 22-04-2016 RM25_RS05910 80105681d639fe9cf7e1f4440c75d580 272 Gene3D G3DSA:3.20.20.140 135 248 5.8E-26 T 22-04-2016 RM25_RS05910 80105681d639fe9cf7e1f4440c75d580 272 Gene3D G3DSA:3.20.20.140 1 65 5.8E-26 T 22-04-2016 RM25_RS04895 78208ec0995dde5e46e6ca8286a9495d 317 PANTHER PTHR32196 1 297 4.7E-111 T 22-04-2016 RM25_RS04895 78208ec0995dde5e46e6ca8286a9495d 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 273 4.4E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RM25_RS04895 78208ec0995dde5e46e6ca8286a9495d 317 PANTHER PTHR32196:SF27 1 297 4.7E-111 T 22-04-2016 RM25_RS00990 187be4463d704c47310259eef31fa5c2 120 Gene3D G3DSA:2.60.120.10 10 111 1.0E-22 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RM25_RS00990 187be4463d704c47310259eef31fa5c2 120 PANTHER PTHR37694 4 120 4.6E-16 T 22-04-2016 RM25_RS00990 187be4463d704c47310259eef31fa5c2 120 SUPERFAMILY SSF51182 12 111 3.06E-19 T 22-04-2016 IPR011051 RmlC-like cupin domain RM25_RS00990 187be4463d704c47310259eef31fa5c2 120 Pfam PF07883 Cupin domain 44 110 8.5E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RM25_RS03390 b34bdf19539f65ecf84ea134eb1282c4 194 PANTHER PTHR30055:SF2 4 112 2.9E-16 T 22-04-2016 RM25_RS03390 b34bdf19539f65ecf84ea134eb1282c4 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 55 1.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RM25_RS03390 b34bdf19539f65ecf84ea134eb1282c4 194 PANTHER PTHR30055 4 112 2.9E-16 T 22-04-2016 RM25_RS03390 b34bdf19539f65ecf84ea134eb1282c4 194 Gene3D G3DSA:1.10.357.10 10 193 7.2E-21 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS03390 b34bdf19539f65ecf84ea134eb1282c4 194 SUPERFAMILY SSF46689 9 83 7.98E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS01035 15632d8659579df948d577c29e390c0d 95 Hamap MF_00631 Cell division protein CrgA [crgA]. 1 95 17.849 T 22-04-2016 IPR009619 Cell division protein CrgA RM25_RS01035 15632d8659579df948d577c29e390c0d 95 Pfam PF06781 Uncharacterised protein family (UPF0233) 2 95 2.9E-26 T 22-04-2016 IPR009619 Cell division protein CrgA RM25_RS11085 fffc56059e54a96ee62d24dba10e6d35 188 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 6 188 1.0E-35 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RM25_RS11085 fffc56059e54a96ee62d24dba10e6d35 188 SUPERFAMILY SSF50249 7 188 3.67E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS11085 fffc56059e54a96ee62d24dba10e6d35 188 PANTHER PTHR10302 7 152 4.1E-32 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RM25_RS11085 fffc56059e54a96ee62d24dba10e6d35 188 Hamap MF_00984 Single-stranded DNA-binding protein. 4 113 31.877 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RM25_RS11085 fffc56059e54a96ee62d24dba10e6d35 188 Pfam PF00436 Single-strand binding protein family 7 106 3.8E-32 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RM25_RS11085 fffc56059e54a96ee62d24dba10e6d35 188 Gene3D G3DSA:2.40.50.140 4 116 5.8E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS06270 d7f143bac8198023d4d1298a1bd13802 553 PIRSF PIRSF018507 1 553 0.0 T 22-04-2016 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 RM25_RS06270 d7f143bac8198023d4d1298a1bd13802 553 Gene3D G3DSA:3.20.20.350 2 553 0.0 T 22-04-2016 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 RM25_RS06270 d7f143bac8198023d4d1298a1bd13802 553 SUPERFAMILY SSF51703 2 553 2.31E-278 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 RM25_RS06270 d7f143bac8198023d4d1298a1bd13802 553 Pfam PF02286 Dehydratase large subunit 2 551 0.0 T 22-04-2016 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 RM25_RS06270 d7f143bac8198023d4d1298a1bd13802 553 ProDom PD025428 SUBUNIT GLYCEROL DEHYDRATASE LARGE LYASE DHAB ALPHA DIOL B12-DEPENDENT METABOLISM 9 544 0.0 T 22-04-2016 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 RM25_RS02925 fd33d59f58cba3a6820c7a3aa893162b 228 PANTHER PTHR11735 6 132 4.4E-29 T 22-04-2016 RM25_RS02925 fd33d59f58cba3a6820c7a3aa893162b 228 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 6 199 3.2E-42 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 RM25_RS02925 fd33d59f58cba3a6820c7a3aa893162b 228 SUPERFAMILY SSF53067 5 106 8.63E-21 T 22-04-2016 RM25_RS02925 fd33d59f58cba3a6820c7a3aa893162b 228 Pfam PF00814 Glycoprotease family 34 137 6.1E-24 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RM25_RS02925 fd33d59f58cba3a6820c7a3aa893162b 228 SUPERFAMILY SSF53067 114 176 2.07E-5 T 22-04-2016 RM25_RS02925 fd33d59f58cba3a6820c7a3aa893162b 228 PANTHER PTHR11735:SF11 6 132 4.4E-29 T 22-04-2016 RM25_RS02925 fd33d59f58cba3a6820c7a3aa893162b 228 Gene3D G3DSA:3.30.420.40 5 135 6.0E-35 T 22-04-2016 RM25_RS06840 e876e51a15eec251803878bed53ede9a 157 Gene3D G3DSA:3.30.300.70 3 82 2.7E-17 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RM25_RS06840 e876e51a15eec251803878bed53ede9a 157 PANTHER PTHR33867:SF1 1 156 1.5E-26 T 22-04-2016 RM25_RS06840 e876e51a15eec251803878bed53ede9a 157 PANTHER PTHR33867 1 156 1.5E-26 T 22-04-2016 RM25_RS06840 e876e51a15eec251803878bed53ede9a 157 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 4 150 17.992 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RM25_RS06840 e876e51a15eec251803878bed53ede9a 157 Pfam PF02576 Putative ribosome maturation factor RimP 10 146 1.7E-25 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RM25_RS06840 e876e51a15eec251803878bed53ede9a 157 SUPERFAMILY SSF75420 4 85 7.72E-15 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RM25_RS03740 ba3461f9f8370f89c41c07e6365f86d5 331 PANTHER PTHR28629:SF2 1 331 3.5E-167 T 22-04-2016 RM25_RS03740 ba3461f9f8370f89c41c07e6365f86d5 331 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 326 5.4E-147 T 22-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 RM25_RS03740 ba3461f9f8370f89c41c07e6365f86d5 331 Gene3D G3DSA:3.30.1180.20 186 330 1.0E-56 T 22-04-2016 RM25_RS03740 ba3461f9f8370f89c41c07e6365f86d5 331 Gene3D G3DSA:3.40.50.10440 11 182 3.3E-70 T 22-04-2016 RM25_RS03740 ba3461f9f8370f89c41c07e6365f86d5 331 SUPERFAMILY SSF82549 1 329 1.6E-120 T 22-04-2016 RM25_RS03740 ba3461f9f8370f89c41c07e6365f86d5 331 Pfam PF02733 Dak1 domain 17 325 1.5E-129 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 RM25_RS03740 ba3461f9f8370f89c41c07e6365f86d5 331 PANTHER PTHR28629 1 331 3.5E-167 T 22-04-2016 RM25_RS02005 7546db3192def3084dfcc065a7717b06 618 PANTHER PTHR10110:SF86 1 334 1.6E-57 T 22-04-2016 RM25_RS02005 7546db3192def3084dfcc065a7717b06 618 PANTHER PTHR10110 1 334 1.6E-57 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 RM25_RS02005 7546db3192def3084dfcc065a7717b06 618 Pfam PF00999 Sodium/hydrogen exchanger family 7 327 2.9E-40 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RM25_RS02005 7546db3192def3084dfcc065a7717b06 618 PANTHER PTHR10110 398 483 1.6E-57 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 RM25_RS02005 7546db3192def3084dfcc065a7717b06 618 PANTHER PTHR10110:SF86 398 483 1.6E-57 T 22-04-2016 RM25_RS10930 5a29657d2c6bc78dd5b8fc09a01b1c6c 312 SUPERFAMILY SSF53474 3 311 3.38E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS10930 5a29657d2c6bc78dd5b8fc09a01b1c6c 312 PANTHER PTHR11614:SF87 5 138 5.3E-25 T 22-04-2016 RM25_RS10930 5a29657d2c6bc78dd5b8fc09a01b1c6c 312 PANTHER PTHR11614:SF87 157 311 5.3E-25 T 22-04-2016 RM25_RS10930 5a29657d2c6bc78dd5b8fc09a01b1c6c 312 PANTHER PTHR11614 5 138 5.3E-25 T 22-04-2016 RM25_RS10930 5a29657d2c6bc78dd5b8fc09a01b1c6c 312 PANTHER PTHR11614 157 311 5.3E-25 T 22-04-2016 RM25_RS10930 5a29657d2c6bc78dd5b8fc09a01b1c6c 312 Pfam PF12146 Serine aminopeptidase, S33 27 294 3.2E-40 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 RM25_RS10930 5a29657d2c6bc78dd5b8fc09a01b1c6c 312 Gene3D G3DSA:3.40.50.1820 3 310 8.8E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS07205 0430c3d91b175b5837050c3778e0c4a7 181 Pfam PF01252 Signal peptidase (SPase) II 10 148 1.3E-26 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RM25_RS07205 0430c3d91b175b5837050c3778e0c4a7 181 PANTHER PTHR33695 1 162 3.1E-29 T 22-04-2016 RM25_RS07205 0430c3d91b175b5837050c3778e0c4a7 181 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 91 106 4.7E-9 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RM25_RS07205 0430c3d91b175b5837050c3778e0c4a7 181 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 129 145 4.7E-9 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RM25_RS07205 0430c3d91b175b5837050c3778e0c4a7 181 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 48 56 4.7E-9 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RM25_RS07205 0430c3d91b175b5837050c3778e0c4a7 181 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 154 12.389 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RM25_RS07205 0430c3d91b175b5837050c3778e0c4a7 181 PANTHER PTHR33695:SF1 1 162 3.1E-29 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RM25_RS00020 a23dda315d7734cf145cc0329e4893ae 393 Gene3D G3DSA:3.40.50.2000 171 344 4.4E-34 T 22-04-2016 RM25_RS00020 a23dda315d7734cf145cc0329e4893ae 393 Pfam PF13439 Glycosyltransferase Family 4 15 178 1.1E-18 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RM25_RS00020 a23dda315d7734cf145cc0329e4893ae 393 Pfam PF00534 Glycosyl transferases group 1 199 343 3.4E-29 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RM25_RS00020 a23dda315d7734cf145cc0329e4893ae 393 PANTHER PTHR12526 1 392 1.4E-101 T 22-04-2016 RM25_RS00020 a23dda315d7734cf145cc0329e4893ae 393 SUPERFAMILY SSF53756 1 375 9.77E-75 T 22-04-2016 RM25_RS00020 a23dda315d7734cf145cc0329e4893ae 393 PANTHER PTHR12526:SF363 1 392 1.4E-101 T 22-04-2016 RM25_RS05950 ffda06d3cb00f6b212029c12676d09c5 269 Gene3D G3DSA:3.40.50.2020 123 248 1.7E-16 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS05950 ffda06d3cb00f6b212029c12676d09c5 269 PANTHER PTHR11907 123 238 1.3E-14 T 22-04-2016 RM25_RS05950 ffda06d3cb00f6b212029c12676d09c5 269 PANTHER PTHR11907 64 97 1.3E-14 T 22-04-2016 RM25_RS05950 ffda06d3cb00f6b212029c12676d09c5 269 SUPERFAMILY SSF53271 123 248 8.01E-16 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RM25_RS05950 ffda06d3cb00f6b212029c12676d09c5 269 PANTHER PTHR11907:SF9 123 238 1.3E-14 T 22-04-2016 RM25_RS05950 ffda06d3cb00f6b212029c12676d09c5 269 PANTHER PTHR11907:SF9 64 97 1.3E-14 T 22-04-2016 RM25_RS05950 ffda06d3cb00f6b212029c12676d09c5 269 Pfam PF00156 Phosphoribosyl transferase domain 194 246 2.6E-8 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RM25_RS11905 300edfecd66a922c6e7f0fc8aafbbc8f 338 SUPERFAMILY SSF58113 4 125 6.8E-7 T 22-04-2016 RM25_RS01190 8395caa90707833e82078bd500e66005 323 Gene3D G3DSA:1.10.3470.10 2 320 2.3E-97 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RM25_RS01190 8395caa90707833e82078bd500e66005 323 PANTHER PTHR30472:SF31 1 323 2.1E-124 T 22-04-2016 RM25_RS01190 8395caa90707833e82078bd500e66005 323 SUPERFAMILY SSF81345 2 317 6.02E-78 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RM25_RS01190 8395caa90707833e82078bd500e66005 323 PANTHER PTHR30472 1 323 2.1E-124 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RM25_RS01190 8395caa90707833e82078bd500e66005 323 Pfam PF01032 FecCD transport family 7 317 5.5E-92 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RM25_RS08035 db26c72241f1f8d22a24aad645d0c245 270 PANTHER PTHR41282:SF1 1 270 7.4E-39 T 22-04-2016 RM25_RS08035 db26c72241f1f8d22a24aad645d0c245 270 Pfam PF12811 Bax inhibitor 1 like 5 270 6.5E-67 T 22-04-2016 IPR010539 Protein of unknown function UCP009160 RM25_RS08035 db26c72241f1f8d22a24aad645d0c245 270 PANTHER PTHR41282 1 270 7.4E-39 T 22-04-2016 RM25_RS08540 830e87c62b0e2cb2dfdf35464f2fb181 269 Gene3D G3DSA:3.40.50.1820 4 139 2.9E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS08540 830e87c62b0e2cb2dfdf35464f2fb181 269 Gene3D G3DSA:3.40.50.1820 171 259 2.9E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS08540 830e87c62b0e2cb2dfdf35464f2fb181 269 PANTHER PTHR23024:SF24 18 119 2.1E-15 T 22-04-2016 RM25_RS08540 830e87c62b0e2cb2dfdf35464f2fb181 269 Pfam PF07859 alpha/beta hydrolase fold 34 121 4.0E-16 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RM25_RS08540 830e87c62b0e2cb2dfdf35464f2fb181 269 SUPERFAMILY SSF53474 169 242 8.82E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS08540 830e87c62b0e2cb2dfdf35464f2fb181 269 SUPERFAMILY SSF53474 5 135 8.82E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS08540 830e87c62b0e2cb2dfdf35464f2fb181 269 PANTHER PTHR23024 18 119 2.1E-15 T 22-04-2016 RM25_RS11770 e1689ba05dca4bdeaaa1acb7f0956e11 422 Pfam PF05656 Protein of unknown function (DUF805) 36 141 8.4E-23 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 RM25_RS11770 e1689ba05dca4bdeaaa1acb7f0956e11 422 PANTHER PTHR34980 39 182 2.9E-16 T 22-04-2016 RM25_RS07220 5a64efc489b8349a153c4d41f3a0d2b8 97 Pfam PF02325 YGGT family 12 93 3.6E-13 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 RM25_RS08070 b5ca23bf38500919231a550d9efd75c2 266 SUPERFAMILY SSF52540 2 223 6.12E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08070 b5ca23bf38500919231a550d9efd75c2 266 Gene3D G3DSA:3.40.50.300 2 222 2.7E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08070 b5ca23bf38500919231a550d9efd75c2 266 PANTHER PTHR24220 3 219 6.0E-72 T 22-04-2016 RM25_RS08070 b5ca23bf38500919231a550d9efd75c2 266 Pfam PF00005 ABC transporter 17 160 1.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS08070 b5ca23bf38500919231a550d9efd75c2 266 SMART SM00382 26 211 2.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS01490 34a09aadaee7191524b6aec940e10341 190 PANTHER PTHR33169:SF11 38 130 5.3E-29 T 22-04-2016 RM25_RS01490 34a09aadaee7191524b6aec940e10341 190 PANTHER PTHR33169 38 130 5.3E-29 T 22-04-2016 RM25_RS01490 34a09aadaee7191524b6aec940e10341 190 SUPERFAMILY SSF46785 39 129 1.52E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS01490 34a09aadaee7191524b6aec940e10341 190 Gene3D G3DSA:1.10.10.10 41 133 2.5E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS01490 34a09aadaee7191524b6aec940e10341 190 Pfam PF03551 Transcriptional regulator PadR-like family 55 123 6.3E-21 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal RM25_RS04690 d68f5c88d2a03c0ddf140f03a3619859 244 PANTHER PTHR37313:SF3 6 244 4.9E-35 T 22-04-2016 RM25_RS04690 d68f5c88d2a03c0ddf140f03a3619859 244 Pfam PF05949 Bacterial protein of unknown function (DUF881) 104 242 1.0E-30 T 22-04-2016 IPR010273 Protein of unknown function DUF881 RM25_RS04690 d68f5c88d2a03c0ddf140f03a3619859 244 PANTHER PTHR37313 6 244 4.9E-35 T 22-04-2016 RM25_RS10935 87fe93a093d5c6bd15c8aedbc85eb8e7 255 SUPERFAMILY SSF51695 16 254 2.88E-58 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RM25_RS10935 87fe93a093d5c6bd15c8aedbc85eb8e7 255 Gene3D G3DSA:3.20.20.190 13 253 6.3E-61 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RM25_RS10935 87fe93a093d5c6bd15c8aedbc85eb8e7 255 PANTHER PTHR23344 16 255 2.4E-52 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RM25_RS10935 87fe93a093d5c6bd15c8aedbc85eb8e7 255 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 20 248 6.4E-36 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RM25_RS10935 87fe93a093d5c6bd15c8aedbc85eb8e7 255 PANTHER PTHR23344:SF20 16 255 2.4E-52 T 22-04-2016 RM25_RS09785 e012c161a344ffbdff2014c57f07642b 70 Pfam PF00403 Heavy-metal-associated domain 7 62 1.3E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RM25_RS09785 e012c161a344ffbdff2014c57f07642b 70 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RM25_RS09785 e012c161a344ffbdff2014c57f07642b 70 SUPERFAMILY SSF55008 1 67 1.31E-15 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RM25_RS09785 e012c161a344ffbdff2014c57f07642b 70 PRINTS PR00944 Copper ion binding protein signature 2 14 1.2E-6 T 22-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RM25_RS09785 e012c161a344ffbdff2014c57f07642b 70 PRINTS PR00944 Copper ion binding protein signature 52 65 1.2E-6 T 22-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RM25_RS09785 e012c161a344ffbdff2014c57f07642b 70 PRINTS PR00944 Copper ion binding protein signature 27 40 1.2E-6 T 22-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RM25_RS09785 e012c161a344ffbdff2014c57f07642b 70 PRINTS PR00944 Copper ion binding protein signature 14 27 1.2E-6 T 22-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RM25_RS09785 e012c161a344ffbdff2014c57f07642b 70 Gene3D G3DSA:3.30.70.100 1 62 5.1E-21 T 22-04-2016 RM25_RS12030 86cc97b054f9fa988f8fcda90494ed87 160 SUPERFAMILY SSF46973 53 146 3.79E-20 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RM25_RS12030 86cc97b054f9fa988f8fcda90494ed87 160 PANTHER PTHR34382 42 154 1.3E-20 T 22-04-2016 RM25_RS12030 86cc97b054f9fa988f8fcda90494ed87 160 PANTHER PTHR34382:SF2 42 154 1.3E-20 T 22-04-2016 RM25_RS12030 86cc97b054f9fa988f8fcda90494ed87 160 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 54 146 5.5E-23 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RM25_RS12030 86cc97b054f9fa988f8fcda90494ed87 160 Gene3D G3DSA:1.20.58.80 53 149 2.2E-28 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RM25_RS04515 e1547b287eef0ce1bea21e5313092ceb 273 Pfam PF12502 Protein of unknown function (DUF3710) 79 260 8.7E-51 T 22-04-2016 IPR022183 Protein of unknown function DUF3710 RM25_RS06605 ea4ff0e09f2e4a501c448b07040a04ff 278 Pfam PF02673 Bacitracin resistance protein BacA 6 266 2.7E-73 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RM25_RS06605 ea4ff0e09f2e4a501c448b07040a04ff 278 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 271 17.496 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RM25_RS06605 ea4ff0e09f2e4a501c448b07040a04ff 278 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 264 4.7E-71 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RM25_RS06605 ea4ff0e09f2e4a501c448b07040a04ff 278 PANTHER PTHR30622 1 278 4.8E-95 T 22-04-2016 RM25_RS03170 8d11a8ef58ae38e5812d6d5c1454952f 107 Pfam PF11222 Protein of unknown function (DUF3017) 28 100 2.0E-20 T 22-04-2016 IPR021385 Protein of unknown function DUF3017 RM25_RS04810 3716adfbae1f2e3a37dcd55f403a5462 318 PANTHER PTHR16222 7 304 8.0E-42 T 22-04-2016 RM25_RS04810 3716adfbae1f2e3a37dcd55f403a5462 318 Pfam PF03747 ADP-ribosylglycohydrolase 13 289 1.6E-46 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 RM25_RS04810 3716adfbae1f2e3a37dcd55f403a5462 318 SUPERFAMILY SSF101478 5 300 7.45E-51 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 RM25_RS11110 157ba26c6438fe5828620211579f4231 127 Gene3D G3DSA:3.40.250.10 14 121 1.1E-19 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS11110 157ba26c6438fe5828620211579f4231 127 SMART SM00450 19 120 1.0E-14 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS11110 157ba26c6438fe5828620211579f4231 127 Pfam PF00581 Rhodanese-like domain 21 116 5.2E-11 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS11110 157ba26c6438fe5828620211579f4231 127 SUPERFAMILY SSF52821 16 124 1.15E-20 T 22-04-2016 IPR001763 Rhodanese-like domain RM25_RS02230 616da7f5b6b1f611a2dcadae7659544b 388 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 229 242 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RM25_RS02230 616da7f5b6b1f611a2dcadae7659544b 388 PANTHER PTHR11751:SF401 12 383 1.1E-125 T 22-04-2016 RM25_RS02230 616da7f5b6b1f611a2dcadae7659544b 388 Gene3D G3DSA:3.40.640.10 45 251 7.9E-58 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS02230 616da7f5b6b1f611a2dcadae7659544b 388 SUPERFAMILY SSF53383 21 384 6.05E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS02230 616da7f5b6b1f611a2dcadae7659544b 388 Pfam PF00155 Aminotransferase class I and II 31 379 1.2E-57 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RM25_RS02230 616da7f5b6b1f611a2dcadae7659544b 388 PANTHER PTHR11751 12 383 1.1E-125 T 22-04-2016 RM25_RS02230 616da7f5b6b1f611a2dcadae7659544b 388 Gene3D G3DSA:3.90.1150.10 252 384 3.3E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS07715 1f3dc3223faee36ad3a2e4041686b201 299 Gene3D G3DSA:3.40.190.120 141 238 2.4E-27 T 22-04-2016 RM25_RS07715 1f3dc3223faee36ad3a2e4041686b201 299 SUPERFAMILY SSF53850 36 297 5.32E-43 T 22-04-2016 RM25_RS07715 1f3dc3223faee36ad3a2e4041686b201 299 PANTHER PTHR30177 1 299 4.2E-65 T 22-04-2016 RM25_RS07715 1f3dc3223faee36ad3a2e4041686b201 299 PANTHER PTHR30177:SF12 1 299 4.2E-65 T 22-04-2016 RM25_RS07715 1f3dc3223faee36ad3a2e4041686b201 299 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 37 294 9.4E-45 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RM25_RS07715 1f3dc3223faee36ad3a2e4041686b201 299 Gene3D G3DSA:3.40.190.10 249 298 1.3E-37 T 22-04-2016 RM25_RS07715 1f3dc3223faee36ad3a2e4041686b201 299 Gene3D G3DSA:3.40.190.10 33 140 1.3E-37 T 22-04-2016 RM25_RS08005 b401187309a0d26313a2afb23fdda586 168 Gene3D G3DSA:1.20.120.450 1 167 1.4E-54 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RM25_RS08005 b401187309a0d26313a2afb23fdda586 168 Pfam PF04978 Protein of unknown function (DUF664) 11 165 2.3E-13 T 22-04-2016 IPR007061 Protein of unknown function DUF664 RM25_RS08005 b401187309a0d26313a2afb23fdda586 168 SUPERFAMILY SSF109854 4 164 5.8E-21 T 22-04-2016 RM25_RS05760 cf5d35c8d727ff08d94275e73da182ac 271 Gene3D G3DSA:1.10.3720.10 60 265 6.1E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS05760 cf5d35c8d727ff08d94275e73da182ac 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 268 1.3E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS05760 cf5d35c8d727ff08d94275e73da182ac 271 PANTHER PTHR30465:SF10 2 269 5.8E-75 T 22-04-2016 RM25_RS05760 cf5d35c8d727ff08d94275e73da182ac 271 PANTHER PTHR30465 2 269 5.8E-75 T 22-04-2016 RM25_RS05760 cf5d35c8d727ff08d94275e73da182ac 271 SUPERFAMILY SSF161098 62 249 4.32E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 Pfam PF00199 Catalase 10 388 4.0E-180 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 SUPERFAMILY SSF56634 6 480 6.67E-193 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 PANTHER PTHR11465 10 482 3.6E-249 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 Gene3D G3DSA:2.40.180.10 9 359 2.7E-169 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 SMART SM01060 10 392 1.1E-265 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 PIRSF PIRSF038928 3 482 5.1E-221 T 22-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 ProSitePatterns PS00438 Catalase proximal active site signature. 46 62 - T 22-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 PRINTS PR00067 Catalase signature 290 317 5.7E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 PRINTS PR00067 Catalase signature 106 123 5.7E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 PRINTS PR00067 Catalase signature 23 46 5.7E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 PRINTS PR00067 Catalase signature 125 143 5.7E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 PRINTS PR00067 Catalase signature 85 103 5.7E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 PRINTS PR00067 Catalase signature 322 348 5.7E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS11425 513c2b6f9dddb2f68f67909dea64258d 482 Pfam PF06628 Catalase-related immune-responsive 419 479 1.6E-12 T 22-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RM25_RS05060 9a2ea18c7055dbb7fa91daaf4b99f3af 427 Pfam PF03993 Domain of Unknown Function (DUF349) 185 258 3.3E-18 T 22-04-2016 IPR007139 Protein of unknown function DUF349 RM25_RS05060 9a2ea18c7055dbb7fa91daaf4b99f3af 427 Pfam PF03993 Domain of Unknown Function (DUF349) 122 180 2.0E-9 T 22-04-2016 IPR007139 Protein of unknown function DUF349 RM25_RS05060 9a2ea18c7055dbb7fa91daaf4b99f3af 427 Pfam PF03993 Domain of Unknown Function (DUF349) 262 336 1.3E-19 T 22-04-2016 IPR007139 Protein of unknown function DUF349 RM25_RS10760 08fe087244307e6c73243f30a795d114 187 Gene3D G3DSA:1.20.120.20 115 177 2.9E-5 T 22-04-2016 RM25_RS10760 08fe087244307e6c73243f30a795d114 187 Gene3D G3DSA:1.20.120.20 38 82 2.9E-5 T 22-04-2016 RM25_RS10760 08fe087244307e6c73243f30a795d114 187 Pfam PF12277 Protein of unknown function (DUF3618) 2 46 3.4E-18 T 22-04-2016 IPR022062 Protein of unknown function DUF3618 RM25_RS09840 b303314e3fc66bb67a8c2cff68bb2110 630 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 121 545 1.0E-202 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RM25_RS09840 b303314e3fc66bb67a8c2cff68bb2110 630 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 121 548 54.984 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RM25_RS09840 b303314e3fc66bb67a8c2cff68bb2110 630 PANTHER PTHR30557 114 606 0.0 T 22-04-2016 RM25_RS09840 b303314e3fc66bb67a8c2cff68bb2110 630 PANTHER PTHR30557 26 77 0.0 T 22-04-2016 RM25_RS09840 b303314e3fc66bb67a8c2cff68bb2110 630 PANTHER PTHR30557:SF1 114 606 0.0 T 22-04-2016 RM25_RS09840 b303314e3fc66bb67a8c2cff68bb2110 630 PANTHER PTHR30557:SF1 26 77 0.0 T 22-04-2016 RM25_RS09840 b303314e3fc66bb67a8c2cff68bb2110 630 Pfam PF01964 Radical SAM ThiC family 122 542 4.0E-196 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RM25_RS06830 ab33556dbdf32cb08590657d1b73458e 74 Pfam PF04296 Protein of unknown function (DUF448) 2 65 1.1E-17 T 22-04-2016 IPR007393 Domain of unknown function DUF448 RM25_RS06830 ab33556dbdf32cb08590657d1b73458e 74 SUPERFAMILY SSF64376 1 67 5.89E-16 T 22-04-2016 IPR007393 Domain of unknown function DUF448 RM25_RS06830 ab33556dbdf32cb08590657d1b73458e 74 Gene3D G3DSA:3.30.1230.10 1 65 1.8E-18 T 22-04-2016 IPR007393 Domain of unknown function DUF448 RM25_RS06080 e66f18f49ff897214557661baf385422 164 Pfam PF11343 Protein of unknown function (DUF3145) 8 162 4.7E-62 T 22-04-2016 IPR021491 Protein of unknown function DUF3145 RM25_RS09490 b6b122ced18dc7044d8296d0839b5f11 193 PIRSF PIRSF037394 1 193 6.2E-64 T 22-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted RM25_RS09490 b6b122ced18dc7044d8296d0839b5f11 193 Pfam PF09819 ABC-type cobalt transport system, permease component 9 130 2.5E-38 T 22-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted RM25_RS06515 e70038a89a4ca03b0561813d8b3f979d 404 Pfam PF00155 Aminotransferase class I and II 35 394 2.4E-50 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RM25_RS06515 e70038a89a4ca03b0561813d8b3f979d 404 PANTHER PTHR11751:SF303 9 400 2.0E-142 T 22-04-2016 RM25_RS06515 e70038a89a4ca03b0561813d8b3f979d 404 SUPERFAMILY SSF53383 7 400 8.02E-91 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS06515 e70038a89a4ca03b0561813d8b3f979d 404 Gene3D G3DSA:3.90.1150.10 280 402 1.2E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RM25_RS06515 e70038a89a4ca03b0561813d8b3f979d 404 PANTHER PTHR11751 9 400 2.0E-142 T 22-04-2016 RM25_RS06515 e70038a89a4ca03b0561813d8b3f979d 404 Gene3D G3DSA:3.40.640.10 50 279 1.8E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS00525 870de04634b33936e383d4a5edd899e0 303 SMART SM00079 62 289 0.003 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RM25_RS00525 870de04634b33936e383d4a5edd899e0 303 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 63 288 1.7E-52 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RM25_RS00525 870de04634b33936e383d4a5edd899e0 303 SUPERFAMILY SSF53850 10 287 2.9E-55 T 22-04-2016 RM25_RS00525 870de04634b33936e383d4a5edd899e0 303 Gene3D G3DSA:3.40.190.10 59 139 5.0E-33 T 22-04-2016 RM25_RS00525 870de04634b33936e383d4a5edd899e0 303 Gene3D G3DSA:3.40.190.10 251 288 5.0E-33 T 22-04-2016 RM25_RS00525 870de04634b33936e383d4a5edd899e0 303 Gene3D G3DSA:3.40.190.10 140 250 2.6E-13 T 22-04-2016 RM25_RS00525 870de04634b33936e383d4a5edd899e0 303 PANTHER PTHR18966:SF191 49 286 3.4E-34 T 22-04-2016 RM25_RS00525 870de04634b33936e383d4a5edd899e0 303 PANTHER PTHR18966 49 286 3.4E-34 T 22-04-2016 RM25_RS00525 870de04634b33936e383d4a5edd899e0 303 SMART SM00062 62 290 1.0E-41 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RM25_RS05315 0581cc91bca57b6c0f405d9b5708df3b 208 SUPERFAMILY SSF53335 6 173 1.38E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS05315 0581cc91bca57b6c0f405d9b5708df3b 208 PANTHER PTHR10108 3 166 8.0E-41 T 22-04-2016 RM25_RS05315 0581cc91bca57b6c0f405d9b5708df3b 208 Pfam PF07021 Methionine biosynthesis protein MetW 3 198 5.1E-62 T 22-04-2016 IPR010743 Methionine biosynthesis MetW RM25_RS05315 0581cc91bca57b6c0f405d9b5708df3b 208 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 3 198 1.4E-62 T 22-04-2016 IPR010743 Methionine biosynthesis MetW RM25_RS05315 0581cc91bca57b6c0f405d9b5708df3b 208 PANTHER PTHR10108:SF831 3 166 8.0E-41 T 22-04-2016 RM25_RS05315 0581cc91bca57b6c0f405d9b5708df3b 208 Gene3D G3DSA:3.40.50.150 11 173 9.8E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS00345 52076f8fcdecb0f81313219af9b888f6 294 PANTHER PTHR30413 29 294 3.4E-42 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RM25_RS00345 52076f8fcdecb0f81313219af9b888f6 294 Pfam PF01061 ABC-2 type transporter 31 238 8.4E-20 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RM25_RS00345 52076f8fcdecb0f81313219af9b888f6 294 PANTHER PTHR30413:SF8 29 294 3.4E-42 T 22-04-2016 RM25_RS00345 52076f8fcdecb0f81313219af9b888f6 294 PRINTS PR00164 ABC-2 type transport system membrane protein signature 80 102 3.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RM25_RS00345 52076f8fcdecb0f81313219af9b888f6 294 PRINTS PR00164 ABC-2 type transport system membrane protein signature 157 181 3.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RM25_RS00345 52076f8fcdecb0f81313219af9b888f6 294 PRINTS PR00164 ABC-2 type transport system membrane protein signature 49 70 3.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RM25_RS00490 a084a5ad212fffbd85d7a3ed5f657b70 668 Gene3D G3DSA:3.40.50.980 24 199 5.8E-31 T 22-04-2016 RM25_RS00490 a084a5ad212fffbd85d7a3ed5f657b70 668 SUPERFAMILY SSF56801 22 295 1.7E-112 T 22-04-2016 RM25_RS00490 a084a5ad212fffbd85d7a3ed5f657b70 668 SUPERFAMILY SSF56801 345 609 1.7E-112 T 22-04-2016 RM25_RS00490 a084a5ad212fffbd85d7a3ed5f657b70 668 Pfam PF00501 AMP-binding enzyme 26 478 7.3E-92 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RM25_RS00490 a084a5ad212fffbd85d7a3ed5f657b70 668 PANTHER PTHR24096:SF193 37 612 4.6E-161 T 22-04-2016 RM25_RS00490 a084a5ad212fffbd85d7a3ed5f657b70 668 Gene3D G3DSA:3.40.50.980 200 290 1.8E-28 T 22-04-2016 RM25_RS00490 a084a5ad212fffbd85d7a3ed5f657b70 668 Gene3D G3DSA:3.40.50.980 342 404 1.8E-28 T 22-04-2016 RM25_RS00490 a084a5ad212fffbd85d7a3ed5f657b70 668 PANTHER PTHR24096 37 612 4.6E-161 T 22-04-2016 RM25_RS00490 a084a5ad212fffbd85d7a3ed5f657b70 668 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 22-04-2016 IPR020845 AMP-binding, conserved site RM25_RS00490 a084a5ad212fffbd85d7a3ed5f657b70 668 Gene3D G3DSA:2.30.38.10 405 469 6.8E-17 T 22-04-2016 RM25_RS03850 b772f6d53e0cb6156ca8f834eff160d0 424 Pfam PF01594 Domain of unknown function DUF20 84 397 1.9E-30 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RM25_RS03850 b772f6d53e0cb6156ca8f834eff160d0 424 PANTHER PTHR21716 57 414 7.8E-31 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 Pfam PF02910 Fumarate reductase flavoprotein C-term 451 529 2.1E-9 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 PANTHER PTHR11632:SF27 1 503 1.4E-174 T 22-04-2016 RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 344 366 2.1E-10 T 22-04-2016 RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 1 18 2.1E-10 T 22-04-2016 RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 Gene3D G3DSA:3.50.50.60 338 397 5.7E-90 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 Gene3D G3DSA:3.50.50.60 1 226 5.7E-90 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 SUPERFAMILY SSF46977 423 523 4.06E-18 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 SUPERFAMILY SSF51905 345 397 6.66E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 SUPERFAMILY SSF51905 1 238 6.66E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 1 497 3.4E-145 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 PANTHER PTHR11632 1 503 1.4E-174 T 22-04-2016 RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 Gene3D G3DSA:1.20.58.100 425 514 2.6E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 Gene3D G3DSA:3.90.700.10 227 337 4.4E-32 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 Pfam PF00890 FAD binding domain 1 381 3.1E-89 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RM25_RS06175 3de72d51e9139d476ebe8a0952dd442a 536 SUPERFAMILY SSF56425 221 341 5.23E-34 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RM25_RS05225 3e2ce0279bce199dfa0f443c141b5c0b 282 Gene3D G3DSA:3.60.20.10 55 251 6.6E-49 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RM25_RS05225 3e2ce0279bce199dfa0f443c141b5c0b 282 Pfam PF00227 Proteasome subunit 53 232 1.0E-33 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 RM25_RS05225 3e2ce0279bce199dfa0f443c141b5c0b 282 TIGRFAM TIGR03690 20S_bact_beta: proteasome, beta subunit 52 270 1.4E-98 T 22-04-2016 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria GO:0004298|GO:0005839|GO:0010498 UniPathway: UPA00997 RM25_RS05225 3e2ce0279bce199dfa0f443c141b5c0b 282 SUPERFAMILY SSF56235 52 263 1.18E-49 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RM25_RS05225 3e2ce0279bce199dfa0f443c141b5c0b 282 PANTHER PTHR11599 8 275 4.7E-92 T 22-04-2016 RM25_RS05225 3e2ce0279bce199dfa0f443c141b5c0b 282 PANTHER PTHR11599:SF58 8 275 4.7E-92 T 22-04-2016 RM25_RS08770 4f0bf86ad814146230ac2bfa48364849 496 PIRSF PIRSF006060 2 483 7.6E-68 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS08770 4f0bf86ad814146230ac2bfa48364849 496 PANTHER PTHR11785 17 472 6.1E-207 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RM25_RS08770 4f0bf86ad814146230ac2bfa48364849 496 PANTHER PTHR11785:SF25 17 472 6.1E-207 T 22-04-2016 RM25_RS08770 4f0bf86ad814146230ac2bfa48364849 496 Pfam PF00324 Amino acid permease 31 466 3.1E-101 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RM25_RS08770 4f0bf86ad814146230ac2bfa48364849 496 ProSitePatterns PS00218 Amino acid permeases signature. 56 86 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RM25_RS11040 a24b50623d020200d09e79b86c7642ef 272 Pfam PF14300 Domain of unknown function (DUF4375) 55 166 5.3E-6 T 22-04-2016 IPR025402 Domain of unknown function DUF4375 RM25_RS04485 3a86458e5ff919c0b4da3aa5b204512b 361 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 200 295 3.0E-27 T 22-04-2016 IPR019236 Domain of unknown function DUF2183 RM25_RS04485 3a86458e5ff919c0b4da3aa5b204512b 361 PANTHER PTHR28208 43 301 3.3E-37 T 22-04-2016 RM25_RS07735 341384315241f8c908f58a731f5c9979 372 PIRSF PIRSF006078 4 371 4.4E-91 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RM25_RS07735 341384315241f8c908f58a731f5c9979 372 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 5 369 4.3E-85 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RM25_RS07735 341384315241f8c908f58a731f5c9979 372 Pfam PF02595 Glycerate kinase family 6 370 9.5E-101 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RM25_RS07735 341384315241f8c908f58a731f5c9979 372 Gene3D G3DSA:3.90.1510.10 45 272 2.0E-61 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 RM25_RS07735 341384315241f8c908f58a731f5c9979 372 PANTHER PTHR21599 5 367 5.3E-80 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RM25_RS07735 341384315241f8c908f58a731f5c9979 372 SUPERFAMILY SSF110738 5 368 3.01E-85 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RM25_RS11965 2ef1f221c4d2fa92d0b95083fda275fe 301 SUPERFAMILY SSF48726 26 113 1.15E-7 T 22-04-2016 IPR007110 Immunoglobulin-like domain GO:0005515 RM25_RS11965 2ef1f221c4d2fa92d0b95083fda275fe 301 SMART SM00409 31 112 0.001 T 22-04-2016 IPR003599 Immunoglobulin subtype RM25_RS11965 2ef1f221c4d2fa92d0b95083fda275fe 301 Gene3D G3DSA:2.60.40.10 26 114 3.1E-9 T 22-04-2016 IPR013783 Immunoglobulin-like fold RM25_RS11965 2ef1f221c4d2fa92d0b95083fda275fe 301 Pfam PF00395 S-layer homology domain 185 228 1.6E-10 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS11965 2ef1f221c4d2fa92d0b95083fda275fe 301 Pfam PF00395 S-layer homology domain 247 290 1.1E-4 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS07225 04549cb1e377aa2d3a533324072838d0 173 Pfam PF04472 Protein of unknown function (DUF552) 85 156 2.6E-27 T 22-04-2016 IPR007561 Cell division protein SepF/SepF-related GO:0000917 RM25_RS07225 04549cb1e377aa2d3a533324072838d0 173 Hamap MF_01197 Cell division protein SepF [sepF]. 2 164 20.992 T 22-04-2016 IPR023052 Cell division protein SepF GO:0090529 RM25_RS07225 04549cb1e377aa2d3a533324072838d0 173 PANTHER PTHR35798 2 172 8.9E-31 T 22-04-2016 RM25_RS07225 04549cb1e377aa2d3a533324072838d0 173 PANTHER PTHR35798:SF1 2 172 8.9E-31 T 22-04-2016 RM25_RS07935 86afe61d5816f89642c20506e26bc513 203 PANTHER PTHR20855:SF3 6 200 3.3E-32 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 RM25_RS07935 86afe61d5816f89642c20506e26bc513 203 Pfam PF03006 Haemolysin-III related 2 195 4.9E-37 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 RM25_RS07935 86afe61d5816f89642c20506e26bc513 203 PANTHER PTHR20855 6 200 3.3E-32 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 RM25_RS09410 00b35215f2a5fa75e3f911ffa200edef 124 PANTHER PTHR33154:SF4 14 121 3.1E-19 T 22-04-2016 RM25_RS09410 00b35215f2a5fa75e3f911ffa200edef 124 Pfam PF12840 Helix-turn-helix domain 27 85 1.3E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS09410 00b35215f2a5fa75e3f911ffa200edef 124 SMART SM00418 28 108 1.5E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS09410 00b35215f2a5fa75e3f911ffa200edef 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 1.11E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS09410 00b35215f2a5fa75e3f911ffa200edef 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 63 1.11E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS09410 00b35215f2a5fa75e3f911ffa200edef 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 1.11E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS09410 00b35215f2a5fa75e3f911ffa200edef 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 80 95 1.11E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RM25_RS09410 00b35215f2a5fa75e3f911ffa200edef 124 SUPERFAMILY SSF46785 18 108 9.26E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS09410 00b35215f2a5fa75e3f911ffa200edef 124 PANTHER PTHR33154 14 121 3.1E-19 T 22-04-2016 RM25_RS09410 00b35215f2a5fa75e3f911ffa200edef 124 Gene3D G3DSA:1.10.10.10 9 108 6.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS05615 58fcae2f76129eed5c839f4548a31c6b 204 Pfam PF01300 Telomere recombination 17 190 2.7E-42 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RM25_RS05615 58fcae2f76129eed5c839f4548a31c6b 204 PANTHER PTHR17490 7 198 2.6E-51 T 22-04-2016 RM25_RS05615 58fcae2f76129eed5c839f4548a31c6b 204 Gene3D G3DSA:3.90.870.10 4 198 8.5E-58 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RM25_RS05615 58fcae2f76129eed5c839f4548a31c6b 204 SUPERFAMILY SSF55821 8 200 5.8E-48 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RM25_RS05615 58fcae2f76129eed5c839f4548a31c6b 204 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 193 1.0E-47 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RM25_RS00640 d04e0da541c8e660f51821cc62d983df 241 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 241 65.361 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RM25_RS00640 d04e0da541c8e660f51821cc62d983df 241 PANTHER PTHR30098 10 216 2.1E-48 T 22-04-2016 RM25_RS00640 d04e0da541c8e660f51821cc62d983df 241 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 30 201 7.7E-54 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RM25_RS00640 d04e0da541c8e660f51821cc62d983df 241 SUPERFAMILY SSF55729 13 220 5.4E-59 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS00640 d04e0da541c8e660f51821cc62d983df 241 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 28 214 1.7E-49 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RM25_RS10905 54cfec270181d803ae7fd451100148c1 317 Pfam PF01261 Xylose isomerase-like TIM barrel 51 251 2.3E-25 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS10905 54cfec270181d803ae7fd451100148c1 317 Gene3D G3DSA:3.20.20.150 19 312 3.3E-62 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS10905 54cfec270181d803ae7fd451100148c1 317 PANTHER PTHR12110:SF3 25 312 6.8E-34 T 22-04-2016 RM25_RS10905 54cfec270181d803ae7fd451100148c1 317 PANTHER PTHR12110 25 312 6.8E-34 T 22-04-2016 RM25_RS10905 54cfec270181d803ae7fd451100148c1 317 SUPERFAMILY SSF51658 12 311 7.88E-49 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RM25_RS06260 e7675e39129cb9f425fe8a0a8f3e68d4 177 PIRSF PIRSF018505 1 177 5.2E-61 T 22-04-2016 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013|UniPathway: UPA00621 RM25_RS06260 e7675e39129cb9f425fe8a0a8f3e68d4 177 SUPERFAMILY SSF47148 42 176 1.57E-52 T 22-04-2016 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013|UniPathway: UPA00621 RM25_RS06260 e7675e39129cb9f425fe8a0a8f3e68d4 177 Pfam PF02287 Dehydratase small subunit 43 174 2.4E-58 T 22-04-2016 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013|UniPathway: UPA00621 RM25_RS04260 89e95bc7fb7ee42301512c6f39e77de1 198 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 180 1.1E-57 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04260 89e95bc7fb7ee42301512c6f39e77de1 198 PANTHER PTHR11670:SF27 1 192 1.7E-89 T 22-04-2016 RM25_RS04260 89e95bc7fb7ee42301512c6f39e77de1 198 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 191 39.521 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04260 89e95bc7fb7ee42301512c6f39e77de1 198 PANTHER PTHR11670 1 192 1.7E-89 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04260 89e95bc7fb7ee42301512c6f39e77de1 198 Gene3D G3DSA:3.20.19.10 1 187 1.9E-38 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RM25_RS04260 89e95bc7fb7ee42301512c6f39e77de1 198 Pfam PF00694 Aconitase C-terminal domain 1 111 6.7E-24 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RM25_RS04260 89e95bc7fb7ee42301512c6f39e77de1 198 SUPERFAMILY SSF52016 1 187 6.67E-52 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RM25_RS10555 734598a15fbcc109e4cb9d6cdc4c9673 100 Pfam PF13834 Domain of unknown function (DUF4193) 1 98 1.6E-33 T 22-04-2016 IPR025242 Protein of unknown function DUF4193 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 Pfam PF00303 Thymidylate synthase 2 270 7.9E-119 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 PRINTS PR00108 Thymidylate synthase family signature 165 191 2.3E-50 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.3E-50 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.3E-50 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 PRINTS PR00108 Thymidylate synthase family signature 203 220 2.3E-50 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.3E-50 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 SUPERFAMILY SSF55831 1 270 1.57E-125 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 270 6.5E-91 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 1.3E-37 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 Hamap MF_00008 Thymidylate synthase [thyA]. 1 270 44.819 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 Gene3D G3DSA:3.30.572.10 1 270 6.6E-127 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RM25_RS03560 732c041cc8c200070a1ea62cccc4ebdb 270 PANTHER PTHR11548 1 270 1.7E-180 T 22-04-2016 RM25_RS03745 2f8f90274d6b4e11559bb738c4d53fef 213 PANTHER PTHR28629 13 210 1.2E-67 T 22-04-2016 RM25_RS03745 2f8f90274d6b4e11559bb738c4d53fef 213 Pfam PF02734 DAK2 domain 37 209 2.8E-52 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 RM25_RS03745 2f8f90274d6b4e11559bb738c4d53fef 213 SUPERFAMILY SSF101473 11 209 9.02E-54 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 RM25_RS03745 2f8f90274d6b4e11559bb738c4d53fef 213 SMART SM01120 37 210 2.4E-65 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 RM25_RS03745 2f8f90274d6b4e11559bb738c4d53fef 213 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 14 208 3.5E-69 T 22-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- RM25_RS02085 4705d7787e766afb9d57797a683cac4f 447 PANTHER PTHR30354 1 447 2.6E-165 T 22-04-2016 RM25_RS02085 4705d7787e766afb9d57797a683cac4f 447 PIRSF PIRSF002746 1 447 8.9E-141 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RM25_RS02085 4705d7787e766afb9d57797a683cac4f 447 PANTHER PTHR30354:SF1 1 447 2.6E-165 T 22-04-2016 RM25_RS02085 4705d7787e766afb9d57797a683cac4f 447 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 446 2.2E-128 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RM25_RS02085 4705d7787e766afb9d57797a683cac4f 447 Pfam PF02447 GntP family permease 6 445 3.3E-134 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RM25_RS10270 18a39f8f0ac2849b8695465e2b2383bb 341 SUPERFAMILY SSF88659 286 337 1.44E-5 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RM25_RS10270 18a39f8f0ac2849b8695465e2b2383bb 341 Gene3D G3DSA:1.10.10.10 295 338 2.2E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS11910 2084866a195caf8ee5451dd64110570a 227 Pfam PF01478 Type IV leader peptidase family 88 194 1.2E-6 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RM25_RS08095 f3d6cfb99816985e88cf80ef5eb5a418 171 PANTHER PTHR37163:SF1 7 159 2.9E-37 T 22-04-2016 RM25_RS08095 f3d6cfb99816985e88cf80ef5eb5a418 171 Pfam PF04417 Protein of unknown function (DUF501) 29 151 2.5E-38 T 22-04-2016 IPR007511 Protein of unknown function DUF501 RM25_RS08095 f3d6cfb99816985e88cf80ef5eb5a418 171 PANTHER PTHR37163 7 159 2.9E-37 T 22-04-2016 RM25_RS04235 876795617bbaebb46c0414c04c8adad2 305 Pfam PF02517 CAAX protease self-immunity 158 247 4.9E-16 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 RM25_RS03905 e15514f217c0457d4ddc5ba6c14f57f4 192 Pfam PF07681 DoxX 26 106 6.2E-9 T 22-04-2016 IPR032808 DoxX family RM25_RS01410 be19a945a3ebc12c368cfa3a50ff9830 329 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 257 263 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RM25_RS01410 be19a945a3ebc12c368cfa3a50ff9830 329 PANTHER PTHR18895 68 299 6.0E-35 T 22-04-2016 RM25_RS01410 be19a945a3ebc12c368cfa3a50ff9830 329 SUPERFAMILY SSF53335 173 300 5.97E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS01410 be19a945a3ebc12c368cfa3a50ff9830 329 Gene3D G3DSA:3.40.50.150 177 298 1.9E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS01410 be19a945a3ebc12c368cfa3a50ff9830 329 Pfam PF05175 Methyltransferase small domain 159 324 6.9E-44 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RM25_RS01410 be19a945a3ebc12c368cfa3a50ff9830 329 PANTHER PTHR18895:SF6 68 299 6.0E-35 T 22-04-2016 RM25_RS09290 89eef58b85729fadf349547bbc20a1f2 308 SUPERFAMILY SSF63817 108 249 3.92E-39 T 22-04-2016 IPR023365 Sortase domain RM25_RS09290 89eef58b85729fadf349547bbc20a1f2 308 Gene3D G3DSA:2.40.260.10 110 249 8.9E-43 T 22-04-2016 IPR023365 Sortase domain RM25_RS09290 89eef58b85729fadf349547bbc20a1f2 308 TIGRFAM TIGR01076 sortase_fam: sortase 121 250 1.5E-40 T 22-04-2016 IPR005754 Sortase family RM25_RS09290 89eef58b85729fadf349547bbc20a1f2 308 Pfam PF04203 Sortase family 122 247 1.9E-23 T 22-04-2016 IPR005754 Sortase family RM25_RS03400 f658cd2a77ec1de2041e79c4e080d543 238 Gene3D G3DSA:3.40.50.880 7 221 3.4E-40 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS03400 f658cd2a77ec1de2041e79c4e080d543 238 Pfam PF03575 Peptidase family S51 5 202 3.6E-34 T 22-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 RM25_RS03400 f658cd2a77ec1de2041e79c4e080d543 238 PANTHER PTHR20842 5 232 9.4E-23 T 22-04-2016 RM25_RS03400 f658cd2a77ec1de2041e79c4e080d543 238 SUPERFAMILY SSF52317 25 204 1.33E-17 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RM25_RS06315 d726f6723fc30c44a65b3e9b34e0eac4 341 Pfam PF09594 Protein of unknown function (DUF2029) 37 248 5.8E-13 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RM25_RS11250 a2b7a54e58b7b804c743ea85d1867a96 247 Pfam PF11799 impB/mucB/samB family C-terminal domain 61 168 1.6E-8 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS11250 a2b7a54e58b7b804c743ea85d1867a96 247 SUPERFAMILY SSF56672 1 51 6.23E-8 T 22-04-2016 RM25_RS11250 a2b7a54e58b7b804c743ea85d1867a96 247 PANTHER PTHR11076:SF40 1 223 4.6E-36 T 22-04-2016 RM25_RS11250 a2b7a54e58b7b804c743ea85d1867a96 247 Pfam PF13438 Domain of unknown function (DUF4113) 183 234 4.3E-14 T 22-04-2016 IPR025188 Domain of unknown function DUF4113 RM25_RS11250 a2b7a54e58b7b804c743ea85d1867a96 247 PANTHER PTHR11076 1 223 4.6E-36 T 22-04-2016 RM25_RS11250 a2b7a54e58b7b804c743ea85d1867a96 247 Gene3D G3DSA:1.10.150.20 1 53 1.8E-13 T 22-04-2016 RM25_RS11250 a2b7a54e58b7b804c743ea85d1867a96 247 Gene3D G3DSA:3.30.1490.100 66 170 1.4E-4 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RM25_RS09685 24379eef0e0b5b90ad650842b4ad12a4 334 PANTHER PTHR38095 1 167 7.7E-28 T 22-04-2016 RM25_RS09685 24379eef0e0b5b90ad650842b4ad12a4 334 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 174 9.0E-27 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 RM25_RS09685 24379eef0e0b5b90ad650842b4ad12a4 334 PANTHER PTHR38095:SF2 1 167 7.7E-28 T 22-04-2016 RM25_RS04975 ffd7bb80a8e238682fc811b82d378941 172 Pfam PF04073 Aminoacyl-tRNA editing domain 40 155 1.3E-27 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RM25_RS04975 ffd7bb80a8e238682fc811b82d378941 172 PANTHER PTHR30411:SF0 6 166 2.0E-51 T 22-04-2016 RM25_RS04975 ffd7bb80a8e238682fc811b82d378941 172 PANTHER PTHR30411 6 166 2.0E-51 T 22-04-2016 RM25_RS04975 ffd7bb80a8e238682fc811b82d378941 172 PIRSF PIRSF006181 6 167 2.4E-47 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RM25_RS04975 ffd7bb80a8e238682fc811b82d378941 172 Gene3D G3DSA:3.90.960.10 6 166 3.6E-53 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RM25_RS04975 ffd7bb80a8e238682fc811b82d378941 172 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 11 164 3.4E-48 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RM25_RS04975 ffd7bb80a8e238682fc811b82d378941 172 SUPERFAMILY SSF55826 11 161 8.37E-41 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RM25_RS11245 16ae244d9630e7f60d0233e0f307fdd0 130 PANTHER PTHR38446 2 127 5.3E-14 T 22-04-2016 RM25_RS11245 16ae244d9630e7f60d0233e0f307fdd0 130 Pfam PF06993 Protein of unknown function (DUF1304) 11 124 1.1E-31 T 22-04-2016 IPR009732 Protein of unknown function DUF1304 RM25_RS11245 16ae244d9630e7f60d0233e0f307fdd0 130 PANTHER PTHR38446:SF1 2 127 5.3E-14 T 22-04-2016 RM25_RS07745 8e907fcc4d6162e9df44ef893d5afbee 71 Pfam PF04328 Protein of unknown function (DUF466) 12 71 7.2E-20 T 22-04-2016 IPR007423 Protein of unknown function DUF466 RM25_RS11480 4f1a4f4ca810e6e4ac6d325fb19bd896 347 SUPERFAMILY SSF51430 14 336 1.57E-86 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS11480 4f1a4f4ca810e6e4ac6d325fb19bd896 347 PANTHER PTHR11732 14 334 3.5E-158 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RM25_RS11480 4f1a4f4ca810e6e4ac6d325fb19bd896 347 Gene3D G3DSA:3.20.20.100 14 336 9.2E-84 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS11480 4f1a4f4ca810e6e4ac6d325fb19bd896 347 Pfam PF00248 Aldo/keto reductase family 29 336 1.6E-64 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS11480 4f1a4f4ca810e6e4ac6d325fb19bd896 347 PANTHER PTHR11732:SF191 14 334 3.5E-158 T 22-04-2016 RM25_RS05985 9c0dc01322706220f36e08fb4494a6c6 288 Pfam PF02687 FtsX-like permease family 168 284 7.8E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RM25_RS05985 9c0dc01322706220f36e08fb4494a6c6 288 PANTHER PTHR30489 81 288 2.3E-27 T 22-04-2016 RM25_RS05985 9c0dc01322706220f36e08fb4494a6c6 288 PIRSF PIRSF003097 1 288 4.4E-74 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 RM25_RS11805 ab63a7b63d84e89323bdd3ae7be2a3c3 202 Pfam PF09438 Domain of unknown function (DUF2017) 7 201 3.6E-41 T 22-04-2016 IPR018561 Domain of unknown function DUF2017 RM25_RS03650 f9aa6b9339e2c8ff90a591681c32c39c 149 SUPERFAMILY SSF50129 49 137 5.05E-17 T 22-04-2016 IPR011032 GroES-like RM25_RS03650 f9aa6b9339e2c8ff90a591681c32c39c 149 Gene3D G3DSA:2.30.33.40 50 135 7.2E-19 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS03650 f9aa6b9339e2c8ff90a591681c32c39c 149 Pfam PF00166 Chaperonin 10 Kd subunit 49 135 3.1E-18 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS03650 f9aa6b9339e2c8ff90a591681c32c39c 149 SMART SM00883 49 136 6.1E-21 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS03650 f9aa6b9339e2c8ff90a591681c32c39c 149 PRINTS PR00297 10kDa chaperonin signature 50 65 7.1E-7 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS03650 f9aa6b9339e2c8ff90a591681c32c39c 149 PRINTS PR00297 10kDa chaperonin signature 76 97 7.1E-7 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS03650 f9aa6b9339e2c8ff90a591681c32c39c 149 PRINTS PR00297 10kDa chaperonin signature 123 136 7.1E-7 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS03650 f9aa6b9339e2c8ff90a591681c32c39c 149 PRINTS PR00297 10kDa chaperonin signature 102 114 7.1E-7 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS03650 f9aa6b9339e2c8ff90a591681c32c39c 149 PANTHER PTHR10772 50 145 7.6E-17 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RM25_RS02770 02085978b2277594a72c521ca19917ec 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 26.197 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RM25_RS02770 02085978b2277594a72c521ca19917ec 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 72 1.1E-36 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RM25_RS02770 02085978b2277594a72c521ca19917ec 73 SUPERFAMILY SSF50249 4 72 1.66E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS02770 02085978b2277594a72c521ca19917ec 73 Gene3D G3DSA:2.40.50.140 2 73 3.0E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS02770 02085978b2277594a72c521ca19917ec 73 Pfam PF01176 Translation initiation factor 1A / IF-1 9 71 1.2E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RM25_RS02770 02085978b2277594a72c521ca19917ec 73 SMART SM00316 5 73 0.0016 T 22-04-2016 IPR022967 RNA-binding domain, S1 RM25_RS02770 02085978b2277594a72c521ca19917ec 73 PANTHER PTHR33370 1 73 5.2E-45 T 22-04-2016 RM25_RS04760 37025763869a95b0893d25ec9bf17945 200 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 21 200 1.0E-50 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RM25_RS04760 37025763869a95b0893d25ec9bf17945 200 PANTHER PTHR30069 19 200 3.5E-44 T 22-04-2016 RM25_RS04760 37025763869a95b0893d25ec9bf17945 200 Gene3D G3DSA:3.40.50.300 6 200 5.9E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04760 37025763869a95b0893d25ec9bf17945 200 SUPERFAMILY SSF52540 12 200 5.22E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04760 37025763869a95b0893d25ec9bf17945 200 PIRSF PIRSF015617 2 200 1.4E-53 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RM25_RS04760 37025763869a95b0893d25ec9bf17945 200 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 18 200 6.8E-60 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RM25_RS07055 8abb990e39074df915f5d1b742b7056c 86 PRINTS PR01651 Protein-export SecG membrane protein signature 31 45 5.0E-7 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RM25_RS07055 8abb990e39074df915f5d1b742b7056c 86 PRINTS PR01651 Protein-export SecG membrane protein signature 62 84 5.0E-7 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RM25_RS07055 8abb990e39074df915f5d1b742b7056c 86 PRINTS PR01651 Protein-export SecG membrane protein signature 11 31 5.0E-7 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RM25_RS07055 8abb990e39074df915f5d1b742b7056c 86 PRINTS PR01651 Protein-export SecG membrane protein signature 46 62 5.0E-7 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RM25_RS07055 8abb990e39074df915f5d1b742b7056c 86 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 11 81 2.3E-17 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RM25_RS07055 8abb990e39074df915f5d1b742b7056c 86 Pfam PF03840 Preprotein translocase SecG subunit 13 80 1.9E-15 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RM25_RS05805 a4cf1240d49ea57b1fdb33274a43509f 979 Pfam PF03699 Uncharacterised protein family (UPF0182) 28 828 1.8E-270 T 22-04-2016 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 RM25_RS05805 a4cf1240d49ea57b1fdb33274a43509f 979 Hamap MF_01600 UPF0182 protein . 18 913 17.48 T 22-04-2016 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 RM25_RS05805 a4cf1240d49ea57b1fdb33274a43509f 979 PANTHER PTHR39344 220 978 2.7E-271 T 22-04-2016 RM25_RS05805 a4cf1240d49ea57b1fdb33274a43509f 979 PANTHER PTHR39344 5 200 2.7E-271 T 22-04-2016 RM25_RS00460 43d50b223f78d18209908a2ca414267a 382 Pfam PF02687 FtsX-like permease family 259 375 1.8E-14 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RM25_RS00460 43d50b223f78d18209908a2ca414267a 382 PANTHER PTHR30572 239 382 9.3E-17 T 22-04-2016 RM25_RS05670 aa89be4e1b352dcf3cb3d0ca6358c190 441 Pfam PF09594 Protein of unknown function (DUF2029) 95 297 4.6E-6 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RM25_RS09000 16f91cd41cd6a696f1638a256b24438b 258 Pfam PF00588 SpoU rRNA Methylase family 87 223 2.3E-24 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RM25_RS09000 16f91cd41cd6a696f1638a256b24438b 258 SUPERFAMILY SSF75217 72 229 1.31E-36 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RM25_RS09000 16f91cd41cd6a696f1638a256b24438b 258 PANTHER PTHR12029 99 226 3.0E-21 T 22-04-2016 RM25_RS09000 16f91cd41cd6a696f1638a256b24438b 258 Gene3D G3DSA:3.40.1280.10 67 230 5.8E-38 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RM25_RS02860 5d8ed86a8f7698de33003d46179f3088 127 PIRSF PIRSF028777 1 127 9.8E-44 T 22-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 RM25_RS02860 5d8ed86a8f7698de33003d46179f3088 127 PANTHER PTHR31503 3 127 7.3E-32 T 22-04-2016 RM25_RS02860 5d8ed86a8f7698de33003d46179f3088 127 Pfam PF03733 Inner membrane component domain 4 54 1.0E-17 T 22-04-2016 IPR005185 Inner membrane component domain RM25_RS02860 5d8ed86a8f7698de33003d46179f3088 127 Pfam PF03733 Inner membrane component domain 69 118 1.5E-15 T 22-04-2016 IPR005185 Inner membrane component domain RM25_RS10075 943a2cfd9f39d2c435ed9a6b4b3c19f5 247 PANTHER PTHR31851 28 247 3.2E-59 T 22-04-2016 RM25_RS10075 943a2cfd9f39d2c435ed9a6b4b3c19f5 247 Pfam PF01988 VIT family 33 240 7.9E-54 T 22-04-2016 IPR008217 Ccc1 family RM25_RS10885 2c8d2ddb9cffee78bd06d86f8acd1f3b 99 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 62 4.7E-9 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RM25_RS10885 2c8d2ddb9cffee78bd06d86f8acd1f3b 99 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 51 1.9E-5 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RM25_RS10885 2c8d2ddb9cffee78bd06d86f8acd1f3b 99 SUPERFAMILY SSF143120 3 67 2.09E-11 T 22-04-2016 RM25_RS10885 2c8d2ddb9cffee78bd06d86f8acd1f3b 99 Gene3D G3DSA:3.40.1620.10 4 50 5.6E-7 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RM25_RS07050 ff987f1c45be15db2928033eb77d404c 102 Pfam PF13397 RNA polymerase-binding protein 1 92 1.2E-33 T 22-04-2016 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 RM25_RS07050 ff987f1c45be15db2928033eb77d404c 102 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 1 95 18.944 T 22-04-2016 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 RM25_RS12125 f43814d99d0d8951a6c94412f0fc9e2d 251 Pfam PF13396 Phospholipase_D-nuclease N-terminal 27 70 1.1E-7 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal RM25_RS09525 6d1cc00e9c23283be045ead6769b9ee3 106 ProDom PD026347 LSR2-LIKE LSR2 ANTIGEN IMMUNE PRECURSOR RESPONSE SIGNAL PLASMID LYSYL GP61 1 102 5.0E-20 T 22-04-2016 IPR024412 Lsr2 RM25_RS09525 6d1cc00e9c23283be045ead6769b9ee3 106 Pfam PF11774 Lsr2 1 104 3.1E-36 T 22-04-2016 IPR024412 Lsr2 RM25_RS06670 b6737a483dddea545cee6c5d7e8d8c3c 228 PANTHER PTHR23024:SF41 7 224 2.9E-35 T 22-04-2016 RM25_RS06670 b6737a483dddea545cee6c5d7e8d8c3c 228 Pfam PF00326 Prolyl oligopeptidase family 81 224 1.8E-7 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RM25_RS06670 b6737a483dddea545cee6c5d7e8d8c3c 228 PANTHER PTHR23024 7 224 2.9E-35 T 22-04-2016 RM25_RS06670 b6737a483dddea545cee6c5d7e8d8c3c 228 SUPERFAMILY SSF53474 20 223 5.77E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS06670 b6737a483dddea545cee6c5d7e8d8c3c 228 Gene3D G3DSA:3.40.50.1820 4 224 1.0E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RM25_RS00820 fa8698db064f8898a7a961776084ec8b 280 Pfam PF00248 Aldo/keto reductase family 22 266 1.1E-46 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS00820 fa8698db064f8898a7a961776084ec8b 280 SUPERFAMILY SSF51430 10 267 2.1E-84 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS00820 fa8698db064f8898a7a961776084ec8b 280 Gene3D G3DSA:3.20.20.100 9 271 3.6E-92 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RM25_RS00820 fa8698db064f8898a7a961776084ec8b 280 PRINTS PR00069 Aldo-keto reductase signature 162 191 1.9E-38 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS00820 fa8698db064f8898a7a961776084ec8b 280 PRINTS PR00069 Aldo-keto reductase signature 201 225 1.9E-38 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS00820 fa8698db064f8898a7a961776084ec8b 280 PRINTS PR00069 Aldo-keto reductase signature 129 146 1.9E-38 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS00820 fa8698db064f8898a7a961776084ec8b 280 PRINTS PR00069 Aldo-keto reductase signature 41 65 1.9E-38 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS00820 fa8698db064f8898a7a961776084ec8b 280 PRINTS PR00069 Aldo-keto reductase signature 97 115 1.9E-38 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS00820 fa8698db064f8898a7a961776084ec8b 280 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 129 146 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RM25_RS00820 fa8698db064f8898a7a961776084ec8b 280 PIRSF PIRSF000097 5 278 6.5E-71 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RM25_RS00820 fa8698db064f8898a7a961776084ec8b 280 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 45 62 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RM25_RS00820 fa8698db064f8898a7a961776084ec8b 280 PANTHER PTHR11732 7 265 7.2E-117 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RM25_RS06695 0b91d2e89eb2b27236b807fd0a035a67 369 Gene3D G3DSA:2.30.40.10 43 55 6.8E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RM25_RS06695 0b91d2e89eb2b27236b807fd0a035a67 369 Gene3D G3DSA:2.30.40.10 326 363 6.8E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RM25_RS06695 0b91d2e89eb2b27236b807fd0a035a67 369 PANTHER PTHR11271 50 360 2.4E-73 T 22-04-2016 RM25_RS06695 0b91d2e89eb2b27236b807fd0a035a67 369 Gene3D G3DSA:3.20.20.140 56 324 3.2E-55 T 22-04-2016 RM25_RS06695 0b91d2e89eb2b27236b807fd0a035a67 369 SUPERFAMILY SSF51556 54 326 7.53E-53 T 22-04-2016 IPR032466 Metal-dependent hydrolase RM25_RS06695 0b91d2e89eb2b27236b807fd0a035a67 369 PANTHER PTHR11271:SF42 50 360 2.4E-73 T 22-04-2016 RM25_RS06695 0b91d2e89eb2b27236b807fd0a035a67 369 Pfam PF01979 Amidohydrolase family 51 349 7.0E-12 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RM25_RS11780 fe20565e3d9a618a0713822e35098ffc 476 Pfam PF09852 Predicted membrane protein (DUF2079) 37 442 1.7E-48 T 22-04-2016 IPR018650 Sulfolobus virus STSV1, Orf64 RM25_RS11865 d8c484b024aa13df2122797e0ffce8fa 174 Pfam PF09656 Putative transmembrane protein (PGPGW) 65 114 5.2E-7 T 22-04-2016 IPR019099 Uncharacterised protein family PGPGW, transmembrane RM25_RS01405 7fff44e865a2df12d69c1922c811b100 257 Pfam PF14256 YwiC-like protein 9 140 1.2E-29 T 22-04-2016 IPR025576 YwiC-like protein RM25_RS08205 687211b7ea6e162ea813f8c22710b632 150 Gene3D G3DSA:2.60.120.10 46 101 1.2E-7 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RM25_RS08205 687211b7ea6e162ea813f8c22710b632 150 SUPERFAMILY SSF51182 6 111 1.4E-11 T 22-04-2016 IPR011051 RmlC-like cupin domain RM25_RS08205 687211b7ea6e162ea813f8c22710b632 150 PANTHER PTHR36448 1 148 5.4E-27 T 22-04-2016 RM25_RS08205 687211b7ea6e162ea813f8c22710b632 150 PANTHER PTHR36448:SF2 1 148 5.4E-27 T 22-04-2016 RM25_RS03945 13ad32c0183c33c83ccc58385b478d05 238 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 3 187 1.4E-55 T 22-04-2016 IPR018768 Domain of unknown function DUF2344 RM25_RS03945 13ad32c0183c33c83ccc58385b478d05 238 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 3 165 1.3E-47 T 22-04-2016 IPR018768 Domain of unknown function DUF2344 RM25_RS07460 9fb0beb6be138271d842f9aaac226d67 256 ProDom PD037701 MEMBRANE INTEGRAL TRANSMEMBRANE RV2219/MT2276 NARROWLY PROBABLE PRECURSOR SIGNAL MLCB22.21 32 244 2.0E-28 T 22-04-2016 RM25_RS07460 9fb0beb6be138271d842f9aaac226d67 256 Pfam PF13829 Domain of unknown function (DUF4191) 31 251 1.5E-69 T 22-04-2016 IPR025445 Protein of unknown function DUF4191 RM25_RS09255 955594b1e19b1aff31db81a848b915f8 167 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 43 134 6.2E-9 T 22-04-2016 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain RM25_RS05665 d0566a58360ccda08dfccfbda4ac19a9 431 Pfam PF09594 Protein of unknown function (DUF2029) 59 273 7.8E-7 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RM25_RS04680 60c2411870feeac5f08dc99f9fcb660e 265 Pfam PF05949 Bacterial protein of unknown function (DUF881) 120 251 5.1E-36 T 22-04-2016 IPR010273 Protein of unknown function DUF881 RM25_RS04680 60c2411870feeac5f08dc99f9fcb660e 265 PANTHER PTHR37313 39 252 6.9E-30 T 22-04-2016 RM25_RS09755 2a1582f903f54d72ddfe963454dd753d 249 Gene3D G3DSA:3.40.50.150 13 182 3.7E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09755 2a1582f903f54d72ddfe963454dd753d 249 SUPERFAMILY SSF53335 4 168 2.29E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RM25_RS09755 2a1582f903f54d72ddfe963454dd753d 249 Pfam PF08241 Methyltransferase domain 28 112 4.3E-10 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RM25_RS03730 eebc72303e5d48d5275a1b329400f9e4 166 Pfam PF00436 Single-strand binding protein family 5 102 4.9E-17 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RM25_RS03730 eebc72303e5d48d5275a1b329400f9e4 166 Gene3D G3DSA:2.40.50.140 3 112 2.8E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS03730 eebc72303e5d48d5275a1b329400f9e4 166 SUPERFAMILY SSF50249 6 150 1.23E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RM25_RS07425 1b2ccc82e54f1d7c1659a9f74d19d67c 310 Pfam PF02595 Glycerate kinase family 148 296 7.7E-16 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RM25_RS07425 1b2ccc82e54f1d7c1659a9f74d19d67c 310 Gene3D G3DSA:3.40.50.10350 191 280 2.3E-8 T 22-04-2016 IPR018197 Glycerate kinase, restriction-enzyme-like fold RM25_RS07425 1b2ccc82e54f1d7c1659a9f74d19d67c 310 SUPERFAMILY SSF110738 142 290 5.62E-12 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RM25_RS00015 4652ad7a1403d20209ffb836580cce3a 205 Gene3D G3DSA:1.10.1660.10 1 82 1.4E-16 T 22-04-2016 RM25_RS00015 4652ad7a1403d20209ffb836580cce3a 205 SUPERFAMILY SSF46955 1 82 1.58E-14 T 22-04-2016 IPR009061 Putative DNA-binding domain RM25_RS00015 4652ad7a1403d20209ffb836580cce3a 205 Pfam PF13411 MerR HTH family regulatory protein 1 69 7.1E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS00015 4652ad7a1403d20209ffb836580cce3a 205 SMART SM00422 1 71 2.3E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RM25_RS00015 4652ad7a1403d20209ffb836580cce3a 205 PANTHER PTHR30204:SF1 1 69 1.9E-12 T 22-04-2016 RM25_RS00015 4652ad7a1403d20209ffb836580cce3a 205 PANTHER PTHR30204 1 69 1.9E-12 T 22-04-2016 RM25_RS02590 b01491b3098117202f8323d11b2fba8b 159 PANTHER PTHR13256 39 143 8.1E-16 T 22-04-2016 RM25_RS02590 b01491b3098117202f8323d11b2fba8b 159 SUPERFAMILY SSF55729 3 145 1.21E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS02590 b01491b3098117202f8323d11b2fba8b 159 Pfam PF13302 Acetyltransferase (GNAT) domain 7 143 2.6E-20 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RM25_RS02590 b01491b3098117202f8323d11b2fba8b 159 Gene3D G3DSA:3.40.630.30 2 145 1.9E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RM25_RS06950 84e15c8f01622d52d9741ea385908746 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.4E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06950 84e15c8f01622d52d9741ea385908746 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.4E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06950 84e15c8f01622d52d9741ea385908746 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.4E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06950 84e15c8f01622d52d9741ea385908746 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.4E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RM25_RS06950 84e15c8f01622d52d9741ea385908746 248 PANTHER PTHR24319:SF23 1 246 3.6E-43 T 22-04-2016 RM25_RS06950 84e15c8f01622d52d9741ea385908746 248 Gene3D G3DSA:3.40.50.720 4 245 2.5E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06950 84e15c8f01622d52d9741ea385908746 248 PANTHER PTHR24319 1 246 3.6E-43 T 22-04-2016 RM25_RS06950 84e15c8f01622d52d9741ea385908746 248 SUPERFAMILY SSF51735 4 246 7.59E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RM25_RS06950 84e15c8f01622d52d9741ea385908746 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 244 1.1E-38 T 22-04-2016 RM25_RS10415 c2fc7b509039ec6d08b11d291e2e8785 409 Pfam PF00534 Glycosyl transferases group 1 221 378 3.8E-33 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RM25_RS10415 c2fc7b509039ec6d08b11d291e2e8785 409 Pfam PF13439 Glycosyltransferase Family 4 25 201 1.4E-27 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RM25_RS10415 c2fc7b509039ec6d08b11d291e2e8785 409 SUPERFAMILY SSF53756 6 400 4.54E-83 T 22-04-2016 RM25_RS10415 c2fc7b509039ec6d08b11d291e2e8785 409 PANTHER PTHR12526 19 400 1.4E-67 T 22-04-2016 RM25_RS10415 c2fc7b509039ec6d08b11d291e2e8785 409 Gene3D G3DSA:3.40.50.2000 188 378 5.2E-33 T 22-04-2016 RM25_RS05375 60e1362318d588825c9421de0caabe26 318 PANTHER PTHR30482 6 300 7.0E-109 T 22-04-2016 RM25_RS05375 60e1362318d588825c9421de0caabe26 318 PANTHER PTHR30482:SF10 6 300 7.0E-109 T 22-04-2016 RM25_RS05375 60e1362318d588825c9421de0caabe26 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 286 2.4E-41 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RM25_RS07240 aac0c554f92b22294fd78ede8697da17 243 Pfam PF03799 Cell division protein FtsQ 129 227 5.4E-6 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB RM25_RS07240 aac0c554f92b22294fd78ede8697da17 243 Pfam PF08478 POTRA domain, FtsQ-type 55 122 6.3E-17 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type RM25_RS07240 aac0c554f92b22294fd78ede8697da17 243 PANTHER PTHR37820 14 241 1.4E-28 T 22-04-2016 RM25_RS09910 3fdfa10184b3fc60fec2f8606b8b970e 466 Pfam PF10117 McrBC 5-methylcytosine restriction system component 110 412 1.5E-14 T 22-04-2016 IPR019292 5-methylcytosine restriction system component RM25_RS04420 715bd00d29ccd8b2ed7b575dad3f6b00 311 Pfam PF03547 Membrane transport protein 9 135 2.4E-7 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 RM25_RS04420 715bd00d29ccd8b2ed7b575dad3f6b00 311 Pfam PF03547 Membrane transport protein 165 301 9.5E-20 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 RM25_RS04420 715bd00d29ccd8b2ed7b575dad3f6b00 311 PANTHER PTHR36838 1 310 6.7E-28 T 22-04-2016 RM25_RS12130 010409a0a657deee0bebb616425bc330 263 PANTHER PTHR11780:SF12 183 262 3.1E-15 T 22-04-2016 RM25_RS12130 010409a0a657deee0bebb616425bc330 263 Gene3D G3DSA:3.40.30.10 183 261 3.7E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS12130 010409a0a657deee0bebb616425bc330 263 PANTHER PTHR11780 183 262 3.1E-15 T 22-04-2016 RM25_RS12130 010409a0a657deee0bebb616425bc330 263 SUPERFAMILY SSF52833 182 261 1.12E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS08130 56c2f0618025cc9ea9fc5ebd334b2b28 121 Gene3D G3DSA:1.10.1510.10 10 112 8.3E-9 T 22-04-2016 RM25_RS07965 486438fd9c849b94e2ecc886a947363d 144 Pfam PF07681 DoxX 6 97 2.6E-8 T 22-04-2016 IPR032808 DoxX family RM25_RS00155 35a3324bb6918d28f3b385bb83587d4a 133 Pfam PF10722 Putative bacterial sensory transduction regulator 17 125 2.5E-9 T 22-04-2016 IPR019660 Putative sensory transduction regulator YbjN RM25_RS04495 9b60af1a4c3f21ff0dcd242e719f5291 383 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 48 365 2.7E-33 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 RM25_RS04495 9b60af1a4c3f21ff0dcd242e719f5291 383 Gene3D G3DSA:3.40.720.10 42 311 3.8E-35 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RM25_RS04495 9b60af1a4c3f21ff0dcd242e719f5291 383 PANTHER PTHR10151 185 269 3.0E-13 T 22-04-2016 IPR024873 Ectonucleotide pyrophosphatase/phosphodiesterase family RM25_RS04495 9b60af1a4c3f21ff0dcd242e719f5291 383 SUPERFAMILY SSF53649 43 377 4.42E-51 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RM25_RS02500 9b8aeb0867fc6f758056804f789be550 494 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 80 219 1.8E-6 T 22-04-2016 RM25_RS04285 38ea1bbf674fb5e40af20078fdec6673 244 SUPERFAMILY SSF46689 34 90 7.7E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS04285 38ea1bbf674fb5e40af20078fdec6673 244 Gene3D G3DSA:1.10.357.10 31 208 4.2E-12 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RM25_RS08580 bf0cc5bdbdd01014ffb7e5ae988b6044 259 Pfam PF11228 Protein of unknown function (DUF3027) 35 234 6.6E-80 T 22-04-2016 IPR021391 Protein of unknown function DUF3027 RM25_RS00620 268873073cf082f252cadd09990a269d 267 Pfam PF12787 EcsC protein family 73 234 2.6E-11 T 22-04-2016 IPR024787 EcsC protein RM25_RS10940 a8d5f0eff6f3275517df215d58783549 454 Pfam PF07690 Major Facilitator Superfamily 33 383 3.6E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RM25_RS10940 a8d5f0eff6f3275517df215d58783549 454 SUPERFAMILY SSF103473 17 431 8.63E-33 T 22-04-2016 IPR020846 Major facilitator superfamily domain RM25_RS10940 a8d5f0eff6f3275517df215d58783549 454 Gene3D G3DSA:1.20.1250.20 26 213 2.8E-9 T 22-04-2016 RM25_RS10940 a8d5f0eff6f3275517df215d58783549 454 Gene3D G3DSA:1.20.1250.20 235 433 7.5E-13 T 22-04-2016 RM25_RS03335 2647e8e4a265e410132d98addae2da7a 62 Pfam PF13822 Acyl-CoA carboxylase epsilon subunit 1 57 1.9E-16 T 22-04-2016 IPR032716 Acyl-CoA carboxylase epsilon subunit RM25_RS00850 b7cfd0ba7e7e80fd8aa50b416d43f940 201 PANTHER PTHR31462 3 189 3.6E-12 T 22-04-2016 RM25_RS00850 b7cfd0ba7e7e80fd8aa50b416d43f940 201 Pfam PF06736 Protein of unknown function (DUF1211) 5 90 3.4E-29 T 22-04-2016 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 RM25_RS02825 9a9d38aff6a4b9b900bb033bc4c3781e 266 PIRSF PIRSF037395 6 266 2.5E-82 T 22-04-2016 IPR017196 ECF transporter, predicted substrate-specific component UCP037395 RM25_RS02825 9a9d38aff6a4b9b900bb033bc4c3781e 266 Pfam PF12822 Protein of unknown function (DUF3816) 77 248 2.0E-16 T 22-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 RM25_RS09460 c5c3742b83e707c91ade1816efa46cf3 262 Pfam PF02517 CAAX protease self-immunity 158 246 4.6E-15 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 RM25_RS03110 5d532b30175b0e37a80132e5cf06b6dc 83 Pfam PF04226 Transglycosylase associated protein 32 80 1.5E-10 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 RM25_RS03110 5d532b30175b0e37a80132e5cf06b6dc 83 PANTHER PTHR33884 1 82 2.2E-13 T 22-04-2016 RM25_RS10280 e34dd1b40486168b1011b4ca3ba96e65 196 Pfam PF01914 MarC family integral membrane protein 3 194 1.2E-45 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RM25_RS10280 e34dd1b40486168b1011b4ca3ba96e65 196 PANTHER PTHR33508 1 194 2.2E-63 T 22-04-2016 RM25_RS10280 e34dd1b40486168b1011b4ca3ba96e65 196 PANTHER PTHR33508:SF4 1 194 2.2E-63 T 22-04-2016 RM25_RS00455 c7e100dcc6f271e495efc091749fb9fd 222 SUPERFAMILY SSF52540 15 220 1.19E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00455 c7e100dcc6f271e495efc091749fb9fd 222 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RM25_RS00455 c7e100dcc6f271e495efc091749fb9fd 222 SMART SM00382 30 219 2.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RM25_RS00455 c7e100dcc6f271e495efc091749fb9fd 222 Gene3D G3DSA:3.40.50.300 16 222 3.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS00455 c7e100dcc6f271e495efc091749fb9fd 222 Pfam PF00005 ABC transporter 21 170 1.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RM25_RS00455 c7e100dcc6f271e495efc091749fb9fd 222 PANTHER PTHR24220:SF578 2 213 1.6E-76 T 22-04-2016 RM25_RS00455 c7e100dcc6f271e495efc091749fb9fd 222 PANTHER PTHR24220 2 213 1.6E-76 T 22-04-2016 RM25_RS04500 dffdb2cb4047880c84a91b4cfa7e1f3b 417 Pfam PF11268 Protein of unknown function (DUF3071) 1 101 1.6E-19 T 22-04-2016 IPR021421 Protein of unknown function DUF3071 RM25_RS01730 1bbb3afe2e7d5990b33077d0a86477f8 459 Gene3D G3DSA:2.60.40.1120 326 392 7.8E-5 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain RM25_RS01730 1bbb3afe2e7d5990b33077d0a86477f8 459 Pfam PF05738 Cna protein B-type domain 331 390 1.3E-11 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain RM25_RS01730 1bbb3afe2e7d5990b33077d0a86477f8 459 SUPERFAMILY SSF49478 324 391 3.1E-10 T 22-04-2016 RM25_RS06725 4cfecc05dda29769c03f0cbc2d8d0061 204 Pfam PF04138 GtrA-like protein 156 195 3.2E-6 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 RM25_RS06725 4cfecc05dda29769c03f0cbc2d8d0061 204 Pfam PF04138 GtrA-like protein 26 138 1.2E-9 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 RM25_RS07685 a78d4d7bee36fd57ca289b7b37d9a7cd 383 SUPERFAMILY SSF53383 12 203 7.57E-13 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS07685 a78d4d7bee36fd57ca289b7b37d9a7cd 383 SUPERFAMILY SSF53383 260 383 7.57E-13 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RM25_RS07685 a78d4d7bee36fd57ca289b7b37d9a7cd 383 Gene3D G3DSA:3.40.640.10 24 137 9.7E-8 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RM25_RS05890 7428df88c8f560f8b4c8912422ec7238 74 Pfam PF11305 Protein of unknown function (DUF3107) 1 72 2.7E-29 T 22-04-2016 IPR021456 Protein of unknown function DUF3107 RM25_RS09740 e5d4398a88da1bf9494ea49c295494bc 265 Pfam PF00482 Type II secretion system (T2SS), protein F 99 218 1.4E-5 T 22-04-2016 IPR018076 Type II secretion system F domain RM25_RS04140 fe56e02af64aac53e8ae1b7a0a548036 335 PANTHER PTHR30473:SF1 15 335 1.5E-161 T 22-04-2016 RM25_RS04140 fe56e02af64aac53e8ae1b7a0a548036 335 PANTHER PTHR30473 15 335 1.5E-161 T 22-04-2016 RM25_RS04140 fe56e02af64aac53e8ae1b7a0a548036 335 SUPERFAMILY SSF52540 118 287 4.86E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04140 fe56e02af64aac53e8ae1b7a0a548036 335 Gene3D G3DSA:3.40.50.300 118 321 8.8E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04140 fe56e02af64aac53e8ae1b7a0a548036 335 Pfam PF02562 PhoH-like protein 119 322 1.0E-92 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 RM25_RS08425 348f3158ecf9eea6ac232432b1469f9e 499 SUPERFAMILY SSF52540 91 468 5.64E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08425 348f3158ecf9eea6ac232432b1469f9e 499 Gene3D G3DSA:3.40.50.300 305 464 4.6E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS08425 348f3158ecf9eea6ac232432b1469f9e 499 Gene3D G3DSA:3.40.50.300 131 210 4.6E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS03800 fb5cd2d23850a15d82edbf82442d329a 179 SUPERFAMILY SSF52833 9 139 1.43E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS03800 fb5cd2d23850a15d82edbf82442d329a 179 Gene3D G3DSA:3.40.30.10 43 137 1.2E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold RM25_RS03450 f597d02148fa14d91c4818124842e04b 114 Pfam PF12005 Protein of unknown function (DUF3499) 1 109 5.2E-32 T 22-04-2016 IPR021888 Protein of unknown function DUF3499 RM25_RS11155 876d56357fa6c19451aa04e87f71c184 545 Pfam PF09594 Protein of unknown function (DUF2029) 163 376 1.6E-6 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RM25_RS11100 7a4d0ea6c41fdc000d32abe93c6a1a85 119 SUPERFAMILY SSF50324 23 91 3.66E-5 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RM25_RS03290 31d739135968ab1276d21252cef19a15 595 Pfam PF09972 Predicted membrane protein (DUF2207) 40 532 3.2E-61 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane RM25_RS11880 fc20b4c0b670d4caa416f5873d5403ae 218 Pfam PF04138 GtrA-like protein 74 189 3.5E-11 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 RM25_RS11360 5a0ae8fd8f9aec92c711f7eb5843e0a7 857 SMART SM00491 361 476 1.3E-4 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RM25_RS11360 5a0ae8fd8f9aec92c711f7eb5843e0a7 857 SMART SM00487 32 325 4.8E-6 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RM25_RS11360 5a0ae8fd8f9aec92c711f7eb5843e0a7 857 SUPERFAMILY SSF52540 56 180 8.88E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11360 5a0ae8fd8f9aec92c711f7eb5843e0a7 857 SUPERFAMILY SSF52540 281 370 8.88E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11360 5a0ae8fd8f9aec92c711f7eb5843e0a7 857 SUPERFAMILY SSF52540 411 470 8.88E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS11360 5a0ae8fd8f9aec92c711f7eb5843e0a7 857 Gene3D G3DSA:3.40.50.300 38 163 3.6E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS12050 22c1ad058822679b6980061153b5401e 345 SUPERFAMILY SSF52540 2 96 1.7E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS12050 22c1ad058822679b6980061153b5401e 345 SUPERFAMILY SSF52540 142 249 1.7E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS02335 80613c01ead0d157e87932df3d935a56 121 PANTHER PTHR11058:SF5 1 121 7.7E-43 T 22-04-2016 RM25_RS02335 80613c01ead0d157e87932df3d935a56 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 20 120 4.6E-34 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RM25_RS02335 80613c01ead0d157e87932df3d935a56 121 PANTHER PTHR11058 1 121 7.7E-43 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RM25_RS02335 80613c01ead0d157e87932df3d935a56 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 121 17.045 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 RM25_RS03625 0b4b10ddd5b4ff00cf5d7876177839fd 255 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 10 250 3.7E-57 T 22-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 RM25_RS03625 0b4b10ddd5b4ff00cf5d7876177839fd 255 PANTHER PTHR36925 6 255 1.3E-50 T 22-04-2016 RM25_RS10600 5bef80163e14d3b1329ca3e5b99c83d0 259 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 18 169 1.4E-10 T 22-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system RM25_RS07755 5741c64e73074560928284f6a7f9e357 302 PANTHER PTHR30106 1 302 3.6E-58 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RM25_RS07755 5741c64e73074560928284f6a7f9e357 302 Pfam PF03601 Conserved hypothetical protein 698 1 278 5.1E-62 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RM25_RS02015 8251a7103c637f761f2a2ea8ad48c97c 152 Gene3D G3DSA:1.10.10.10 14 142 2.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS02015 8251a7103c637f761f2a2ea8ad48c97c 152 SUPERFAMILY SSF46785 18 142 1.13E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RM25_RS02015 8251a7103c637f761f2a2ea8ad48c97c 152 Pfam PF12802 MarR family 37 94 2.7E-11 T 22-04-2016 RM25_RS02015 8251a7103c637f761f2a2ea8ad48c97c 152 SMART SM00347 31 130 6.5E-4 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RM25_RS07915 d39d99b1ff4cd996f5e058bfd088640a 449 Pfam PF02646 RmuC family 95 380 4.2E-82 T 22-04-2016 IPR003798 DNA recombination RmuC RM25_RS07915 d39d99b1ff4cd996f5e058bfd088640a 449 PANTHER PTHR30563 35 418 7.4E-51 T 22-04-2016 RM25_RS04750 248c45d2a58b24accf1c41ee1a6850ea 223 SUPERFAMILY SSF52540 33 202 8.46E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS04750 248c45d2a58b24accf1c41ee1a6850ea 223 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 33 202 1.5E-54 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 RM25_RS04750 248c45d2a58b24accf1c41ee1a6850ea 223 PANTHER PTHR34848 21 206 3.2E-66 T 22-04-2016 RM25_RS04750 248c45d2a58b24accf1c41ee1a6850ea 223 Gene3D G3DSA:3.40.50.300 33 203 5.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 Gene3D G3DSA:3.40.50.300 5 146 8.4E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 Gene3D G3DSA:3.40.50.300 184 282 8.4E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 SUPERFAMILY SSF52540 6 455 6.08E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 SUPERFAMILY SSF52540 541 746 6.08E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 PANTHER PTHR11070 618 685 3.1E-93 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 PANTHER PTHR11070 702 1056 3.1E-93 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 PANTHER PTHR11070 9 469 3.1E-93 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 Gene3D G3DSA:3.40.50.300 331 417 8.3E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 Gene3D G3DSA:3.40.50.300 645 747 8.3E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 PANTHER PTHR11070:SF4 618 685 3.1E-93 T 22-04-2016 RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 PANTHER PTHR11070:SF4 702 1056 3.1E-93 T 22-04-2016 RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 PANTHER PTHR11070:SF4 9 469 3.1E-93 T 22-04-2016 RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 Pfam PF12705 PD-(D/E)XK nuclease superfamily 842 1114 2.8E-31 T 22-04-2016 RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 Pfam PF00580 UvrD/REP helicase N-terminal domain 14 281 5.9E-19 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RM25_RS05875 8e5069d73421fc9b2d135d7aa7435fd8 1123 Pfam PF13361 UvrD-like helicase C-terminal domain 632 726 6.0E-12 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RM25_RS05690 bfd789d8de1146c45f9ff831d95f7f13 100 Pfam PF13490 Putative zinc-finger 15 48 1.8E-7 T 22-04-2016 IPR027383 Putative zinc-finger RM25_RS11710 375869e2d9476cced6eff47bf5f542a0 222 SUPERFAMILY SSF63817 77 217 1.1E-6 T 22-04-2016 IPR023365 Sortase domain RM25_RS11710 375869e2d9476cced6eff47bf5f542a0 222 Pfam PF04203 Sortase family 81 215 5.3E-8 T 22-04-2016 IPR005754 Sortase family RM25_RS05155 d0e1628cc01d9c453ebab4ebdc71c158 103 Gene3D G3DSA:1.10.8.50 54 102 3.9E-5 T 22-04-2016 RM25_RS11855 17a3b8ec31592ca6cc39588fefc50640 114 Pfam PF04474 Protein of unknown function (DUF554) 11 91 1.9E-15 T 22-04-2016 IPR007563 Protein of unknown function DUF554 RM25_RS03465 a4fe157e16e255b6daf368bc9077666f 338 Pfam PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain 193 333 2.6E-9 T 22-04-2016 IPR019490 Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase, C-terminal GO:0004347|GO:0004476|GO:0005975 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00051+5.3.1.8|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.8+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 RM25_RS03465 a4fe157e16e255b6daf368bc9077666f 338 SUPERFAMILY SSF53697 56 333 1.33E-32 T 22-04-2016 RM25_RS05410 0094b5571911184a0f208dbecdc7ec7b 827 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 475 780 3.5E-65 T 22-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal RM25_RS05410 0094b5571911184a0f208dbecdc7ec7b 827 PANTHER PTHR34697 423 827 5.5E-36 T 22-04-2016 RM25_RS05410 0094b5571911184a0f208dbecdc7ec7b 827 PANTHER PTHR34697 267 405 5.5E-36 T 22-04-2016 RM25_RS02285 731a66ac45fcb89c42b8f3e621e5acbe 132 SUPERFAMILY SSF50346 6 106 2.83E-21 T 22-04-2016 IPR011033 PRC-barrel-like RM25_RS02285 731a66ac45fcb89c42b8f3e621e5acbe 132 Pfam PF05239 PRC-barrel domain 5 73 2.5E-11 T 22-04-2016 IPR027275 PRC-barrel domain RM25_RS02285 731a66ac45fcb89c42b8f3e621e5acbe 132 Gene3D G3DSA:3.90.50.10 12 107 2.3E-8 T 22-04-2016 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 RM25_RS02130 be968e0247330114b1706771e19c6145 158 Pfam PF09350 Domain of unknown function (DUF1992) 14 78 1.6E-13 T 22-04-2016 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain RM25_RS04510 5b3ca85499e1efbaa784b97c4189d93a 88 Pfam PF14019 Protein of unknown function (DUF4235) 9 80 2.2E-15 T 22-04-2016 IPR025329 Protein of unknown function DUF4235 RM25_RS01545 5b362c35523960c73ee8d20e271a70fa 101 Pfam PF01402 Ribbon-helix-helix protein, copG family 66 100 5.2E-6 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 RM25_RS04020 59f673325c9901dd6d38e9701f698f33 352 Pfam PF13830 Domain of unknown function (DUF4192) 29 321 4.5E-38 T 22-04-2016 IPR025447 Protein of unknown function DUF4192 RM25_RS09790 89e23fcb1c0f3d476558d9160643cbf1 109 PANTHER PTHR33677 17 108 1.0E-30 T 22-04-2016 RM25_RS09790 89e23fcb1c0f3d476558d9160643cbf1 109 Pfam PF02583 Metal-sensitive transcriptional repressor 23 104 2.4E-28 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RM25_RS09790 89e23fcb1c0f3d476558d9160643cbf1 109 PANTHER PTHR33677:SF3 17 108 1.0E-30 T 22-04-2016 RM25_RS11925 3e8fd41e36c46dab92d55cb9faf25ce1 314 Pfam PF10708 Protein of unknown function (DUF2510) 18 52 3.1E-12 T 22-04-2016 IPR018929 Domain of unknown function DUF2510 RM25_RS07785 31ef0180288e5c3d9bd848e9bde0c904 387 PANTHER PTHR30106 73 386 1.3E-64 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RM25_RS07785 31ef0180288e5c3d9bd848e9bde0c904 387 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 259 364 2.0E-7 T 22-04-2016 RM25_RS07785 31ef0180288e5c3d9bd848e9bde0c904 387 Pfam PF03601 Conserved hypothetical protein 698 70 361 5.6E-49 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RM25_RS12100 3eb7b31248ea32c44e77800844668b05 509 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 84 234 2.5E-7 T 22-04-2016 RM25_RS01855 10838f9ed7464009e331bf364ec8970c 172 Pfam PF07553 Host cell surface-exposed lipoprotein 123 170 3.6E-21 T 22-04-2016 IPR011434 Domain of unknown function DUF1535 RM25_RS01855 10838f9ed7464009e331bf364ec8970c 172 Pfam PF07553 Host cell surface-exposed lipoprotein 73 120 6.8E-21 T 22-04-2016 IPR011434 Domain of unknown function DUF1535 RM25_RS04600 c26e160c17ad637ea0b57b9fabf3cb0a 199 Pfam PF11452 Protein of unknown function (DUF3000) 12 186 1.9E-65 T 22-04-2016 IPR021555 Protein of unknown function DUF3000 RM25_RS00375 7a962932fa4fdc9910cc7473b6598a87 169 Pfam PF14340 Domain of unknown function (DUF4395) 21 153 2.5E-39 T 22-04-2016 IPR025508 Domain of unknown function DUF4395 RM25_RS02835 cae1d0eca5f00fd249bef044ec2940cb 377 Pfam PF02361 Cobalt transport protein 35 239 1.3E-12 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component RM25_RS02200 5c882dd1062fecfa51b222d8a8551d0c 268 Pfam PF01061 ABC-2 type transporter 37 234 9.7E-16 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RM25_RS08660 8bc557275f9eef9cb33e19e753c6fdb6 93 Pfam PF11662 Protein of unknown function (DUF3263) 13 86 6.2E-34 T 22-04-2016 IPR021678 Protein of unknown function DUF3263 RM25_RS08695 542c58b8018a02363c5c9fc467728dfe 309 Pfam PF09335 SNARE associated Golgi protein 151 261 8.0E-10 T 22-04-2016 IPR032816 SNARE associated Golgi protein RM25_RS04580 497e0efc6ef0b97af3336acceadc41fa 100 Pfam PF10078 Uncharacterized protein conserved in bacteria (DUF2316) 1 89 1.6E-35 T 22-04-2016 IPR018757 Protein of unknown function DUF2316 RM25_RS06780 c0b4eafcff7de3f4186a085404dffaec 241 Pfam PF11209 Protein of unknown function (DUF2993) 28 227 2.4E-8 T 22-04-2016 IPR021373 Protein of unknown function DUF2993 RM25_RS10540 8a57e371d92ee7231b4424b7b300deea 135 Gene3D G3DSA:1.10.150.130 12 95 1.0E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RM25_RS10540 8a57e371d92ee7231b4424b7b300deea 135 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 2.7E-10 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RM25_RS10405 fd1056d839573569e3d010c9293a2836 203 Pfam PF03729 Short repeat of unknown function (DUF308) 34 105 2.1E-11 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane RM25_RS10405 fd1056d839573569e3d010c9293a2836 203 Pfam PF03729 Short repeat of unknown function (DUF308) 116 163 0.0048 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane RM25_RS10405 fd1056d839573569e3d010c9293a2836 203 Pfam PF03729 Short repeat of unknown function (DUF308) 150 196 2.8E-5 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane RM25_RS11950 efcdb60256df46a44e4808c53bf68bad 97 Gene3D G3DSA:3.90.79.10 1 90 3.0E-4 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RM25_RS09765 971527419747844abed9fbff9edd154f 159 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 13 133 3.8E-21 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III RM25_RS00060 05ba6aaa715c3d145edfb25e31537625 121 Pfam PF00395 S-layer homology domain 67 110 7.6E-7 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS00060 05ba6aaa715c3d145edfb25e31537625 121 Pfam PF00395 S-layer homology domain 5 48 2.0E-11 T 22-04-2016 IPR001119 S-layer homology domain RM25_RS09725 35e0c8cc55b752abb4f3f8c2ab0c07d7 103 Pfam PF14029 Protein of unknown function (DUF4244) 46 92 6.0E-13 T 22-04-2016 IPR025338 Protein of unknown function DUF4244 RM25_RS05555 0bacdff233a43d9f31144e8feb5e08b4 152 Pfam PF10739 Protein of unknown function (DUF2550) 14 144 6.7E-34 T 22-04-2016 IPR019675 Protein of unknown function DUF2550 RM25_RS00085 000910cb9af272720d2a77a87d8944ec 91 Pfam PF07561 Domain of Unknown Function (DUF1540) 58 82 4.0E-4 T 22-04-2016 IPR011437 Domain of unknown function DUF1540 RM25_RS00085 000910cb9af272720d2a77a87d8944ec 91 Pfam PF07561 Domain of Unknown Function (DUF1540) 8 37 0.043 T 22-04-2016 IPR011437 Domain of unknown function DUF1540 RM25_RS03920 7418538ef863b1aa42d0ad29b42501e2 376 Pfam PF02517 CAAX protease self-immunity 158 255 7.9E-8 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 RM25_RS00740 f4747dedc8771f4f195d15e0b2f2cbd3 159 ProDom PD007643 SPIRALIN PRECURSOR SIGNAL MEMBRANE PALMITATE LIPOPROTEIN 23 158 0.001 T 22-04-2016 IPR007880 Spiralin GO:0016020 RM25_RS10420 320412f4110494a87619e4146e7b889a 285 SUPERFAMILY SSF69318 63 135 8.11E-5 T 22-04-2016 RM25_RS03245 ad5f3e82627cc16297adc083173e1a36 151 Pfam PF11694 Protein of unknown function (DUF3290) 2 149 2.7E-44 T 22-04-2016 IPR021707 Protein of unknown function DUF3290 RM25_RS01690 dd049df36edba24702e038cad798d1b9 513 TIGRFAM TIGR02165 cas5_6_GSU0054: CRISPR-associated protein GSU0054/csb2, Dpsyc system 4 507 8.8E-132 T 22-04-2016 IPR019089 CRISPR-associated protein, GSU0054 RM25_RS08355 ecdf8740c7c357b39b322ddb39ddad61 173 Pfam PF03729 Short repeat of unknown function (DUF308) 70 135 2.6E-6 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane RM25_RS08355 ecdf8740c7c357b39b322ddb39ddad61 173 Pfam PF03729 Short repeat of unknown function (DUF308) 121 169 7.7E-4 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane RM25_RS08355 ecdf8740c7c357b39b322ddb39ddad61 173 Pfam PF03729 Short repeat of unknown function (DUF308) 17 81 1.2E-5 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane RM25_RS11255 af2ac5715a022a52157eff78d9e1f651 326 Pfam PF12787 EcsC protein family 65 312 6.0E-16 T 22-04-2016 IPR024787 EcsC protein RM25_RS00160 dc8be5967e507946c8fa705a820ed338 140 Pfam PF10722 Putative bacterial sensory transduction regulator 4 128 6.8E-6 T 22-04-2016 IPR019660 Putative sensory transduction regulator YbjN RM25_RS12045 bfed60dc5005b1f2a6889fcbe4e077bc 118 Pfam PF07811 TadE-like protein 17 51 3.2E-8 T 22-04-2016 IPR012495 TadE-like RM25_RS00105 d3673c0bd45efb2191e3c4d7ad03b40c 172 Pfam PF12089 Transmembrane domain of unknown function (DUF3566) 53 171 2.8E-36 T 22-04-2016 IPR021949 Domain of unknown function DUF3566. transmembrane RM25_RS04505 715325ab24ea21ffc745b4d17ad395d7 98 Pfam PF13834 Domain of unknown function (DUF4193) 1 98 1.3E-42 T 22-04-2016 IPR025242 Protein of unknown function DUF4193 RM25_RS11365 6c1d7feb35432c3af8c6add758db8bf4 94 Gene3D G3DSA:1.10.10.60 52 86 1.7E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RM25_RS00775 b1ff56f866ba5871bd0b9263fa012a8f 145 Gene3D G3DSA:1.10.357.20 14 73 2.7E-5 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 RM25_RS05725 fbbe04b035972593e6eeee0a13f137e4 209 Pfam PF09359 VTC domain 2 172 1.4E-12 T 22-04-2016 IPR018966 VTC domain RM25_RS06130 14391a35b46aeacb22d5295e9b6c39c6 215 Pfam PF10050 Predicted metal-binding protein (DUF2284) 22 184 1.1E-24 T 22-04-2016 IPR019271 Protein of unknown function DUF2284, metal-binding RM25_RS03475 0b15595a231bd211deba6c0f15334e44 87 Pfam PF11238 Protein of unknown function (DUF3039) 22 77 8.3E-31 T 22-04-2016 IPR021400 Protein of unknown function DUF3039 RM25_RS09470 b5202031ae5329ad35118e62777c2349 212 Pfam PF13468 Glyoxalase-like domain 4 169 4.3E-28 T 22-04-2016 IPR025870 Glyoxalase-like domain RM25_RS09455 55fdd311553e6b9c31f632df68e2df0f 231 Pfam PF06736 Protein of unknown function (DUF1211) 5 91 1.1E-21 T 22-04-2016 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267