PAES_RS00005	SM00382	ATPases associated with a variety of cellular activities
PAES_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
PAES_RS00010	SM00480	DNA polymerase III beta subunit
PAES_RS00025	SM00849	Metallo-beta-lactamase superfamily
PAES_RS00030	SM00486	DNA polymerase type-B family
PAES_RS00035	SM01228	PAES_RS00035
PAES_RS00075	SM00387	Histidine kinase-like ATPases
PAES_RS00075	SM00433	TopoisomeraseII
PAES_RS00095	SM00316	Ribosomal protein S1-like RNA-binding domain
PAES_RS00105	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PAES_RS00105	SM00245	tail specific protease
PAES_RS00125	SM00450	Rhodanese Homology Domain
PAES_RS00250	SM00382	ATPases associated with a variety of cellular activities
PAES_RS00285	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PAES_RS00305	SM00341	Helicase and RNase D C-terminal
PAES_RS00305	SM00487	DEAD-like helicases superfamily
PAES_RS00305	SM00490	helicase superfamily c-terminal domain
PAES_RS00305	SM00956	PAES_RS00305
PAES_RS00330	SM00901	PAES_RS00330
PAES_RS00345	SM00954	Region found in RelA / SpoT proteins
PAES_RS00500	SM00642	Alpha-amylase domain
PAES_RS00505	SM01049	PAES_RS00505
PAES_RS00575	SM00937	PAES_RS00575
PAES_RS00600	SM00382	ATPases associated with a variety of cellular activities
PAES_RS00605	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
PAES_RS00620	SM00360	RNA recognition motif
PAES_RS00630	SM00938	Nitrogen regulatory protein P-II
PAES_RS00635	SM00645	Papain family cysteine protease
PAES_RS00640	SM00028	Tetratricopeptide repeats
PAES_RS00670	SM00434	DNA Topoisomerase IV
PAES_RS00675	SM00704	CDGSH-type zinc finger. Function unknown.
PAES_RS00735	SM00481	DNA polymerase alpha chain like domain
PAES_RS00840	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PAES_RS00855	SM00507	HNH nucleases
PAES_RS00865	SM00358	Double-stranded RNA binding motif
PAES_RS00865	SM00535	Ribonuclease III family
PAES_RS00870	SM00825	Beta-ketoacyl synthase
PAES_RS00880	SM00822	PAES_RS00880
PAES_RS00885	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
PAES_RS00920	SM00917	LeuA allosteric (dimerisation) domain
PAES_RS00935	SM00382	ATPases associated with a variety of cellular activities
PAES_RS00980	SM00834	Putative regulatory protein
PAES_RS01000	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS01045	SM00937	PAES_RS01045
PAES_RS01050	SM00642	Alpha-amylase domain
PAES_RS01055	SM00642	Alpha-amylase domain
PAES_RS01060	SM00831	Cation transporter/ATPase, N-terminus
PAES_RS01225	SM00849	Metallo-beta-lactamase superfamily
PAES_RS01230	SM00116	Domain in cystathionine beta-synthase and other proteins.
PAES_RS01280	SM00563	Phosphate acyltransferases
PAES_RS01310	SM00852	Probable molybdopterin binding domain
PAES_RS01320	SM00853	MutL C terminal dimerisation domain
PAES_RS01320	SM01340	PAES_RS01320
PAES_RS01340	SM00382	ATPases associated with a variety of cellular activities
PAES_RS01375	SM00838	Elongation factor G C-terminus
PAES_RS01375	SM00889	Elongation factor G, domain IV
PAES_RS01380	SM01192	PAES_RS01380
PAES_RS01380	SM01193	PAES_RS01380
PAES_RS01425	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
PAES_RS01430	SM00649	Ribosomal protein L11/L12
PAES_RS01455	SM00663	RNA polymerase I subunit A N-terminus
PAES_RS01460	SM00878	Biotin carboxylase C-terminal domain
PAES_RS01470	SM00841	Elongation factor P, C-terminal
PAES_RS01470	SM01185	PAES_RS01470
PAES_RS01475	SM00411	bacterial (prokaryotic) histone like domain
PAES_RS01500	SM00091	PAS domain
PAES_RS01515	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PAES_RS01555	SM00487	DEAD-like helicases superfamily
PAES_RS01555	SM01321	PAES_RS01555
PAES_RS01595	SM00871	Bacterial transcription activator, effector binding domain
PAES_RS01655	SM00382	ATPases associated with a variety of cellular activities
PAES_RS01655	SM01086	C-terminal, D2-small domain, of ClpB protein
PAES_RS01675	SM00382	ATPases associated with a variety of cellular activities
PAES_RS01675	SM00962	SRP54-type protein, GTPase domain
PAES_RS01675	SM00963	SRP54-type protein, helical bundle domain
PAES_RS01705	SM00986	Uracil DNA glycosylase superfamily
PAES_RS01705	SM00987	UreE urease accessory protein, C-terminal domain 
PAES_RS01745	SM00382	ATPases associated with a variety of cellular activities
PAES_RS01860	SM00904	Riboflavin kinase
PAES_RS01865	SM01387	PAES_RS01865
PAES_RS01875	SM00072	Guanylate kinase homologues.
PAES_RS01915	SM00935	Outer membrane protein (OmpH-like)
PAES_RS01930	SM01240	PAES_RS01930
PAES_RS01945	SM00382	ATPases associated with a variety of cellular activities
PAES_RS01955	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PAES_RS01965	SM00357	Cold shock protein domain
PAES_RS01965	SM00382	ATPases associated with a variety of cellular activities
PAES_RS01965	SM00959	Rho termination factor, N-terminal domain
PAES_RS01995	SM00893	Electron transfer flavoprotein domain
PAES_RS02000	SM00893	Electron transfer flavoprotein domain
PAES_RS02035	SM00881	CoA binding domain
PAES_RS02040	SM00116	Domain in cystathionine beta-synthase and other proteins.
PAES_RS02105	SM00382	ATPases associated with a variety of cellular activities
PAES_RS02140	SM00382	ATPases associated with a variety of cellular activities
PAES_RS02150	SM00292	breast cancer carboxy-terminal domain
PAES_RS02150	SM00532	Ligase N family
PAES_RS02220	SM00363	S4 RNA-binding domain
PAES_RS02240	SM00974	PAES_RS02240
PAES_RS02285	SM00478	endonuclease III
PAES_RS02305	SM00968	SMC proteins Flexible Hinge Domain
PAES_RS02320	SM01235	PAES_RS02320
PAES_RS02345	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PAES_RS02430	SM01209	PAES_RS02430
PAES_RS02430	SM01210	PAES_RS02430
PAES_RS02440	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PAES_RS02465	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
PAES_RS02465	SM00474	3'-5' exonuclease
PAES_RS02465	SM00475	5'-3' exonuclease
PAES_RS02465	SM00482	DNA polymerase A domain
PAES_RS02525	SM00316	Ribosomal protein S1-like RNA-binding domain
PAES_RS02525	SM00322	K homology RNA-binding domain
PAES_RS02540	SM00382	ATPases associated with a variety of cellular activities
PAES_RS02555	SM00382	ATPases associated with a variety of cellular activities
PAES_RS02610	SM00382	ATPases associated with a variety of cellular activities
PAES_RS02615	SM00028	Tetratricopeptide repeats
PAES_RS02645	SM00890	Domain of unknown function
PAES_RS02650	SM00967	RNA 2'-O ribose methyltransferase substrate binding
PAES_RS02665	SM01130	PAES_RS02665
PAES_RS02670	SM00382	ATPases associated with a variety of cellular activities
PAES_RS02870	SM00529	Helix-turn-helix diphteria tox regulatory element
PAES_RS02870	SM00899	PAES_RS02870
PAES_RS02900	SM00851	MGS-like domain
PAES_RS02900	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PAES_RS02920	SM00400	zinc finger
PAES_RS02920	SM00493	PAES_RS02920
PAES_RS02975	SM01001	AIR carboxylase
PAES_RS02980	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS02995	SM00382	ATPases associated with a variety of cellular activities
PAES_RS03015	SM01154	PAES_RS03015
PAES_RS03045	SM00855	Phosphoglycerate mutase family
PAES_RS03065	SM00382	ATPases associated with a variety of cellular activities
PAES_RS03065	SM00994	ClpX C4-type zinc finger
PAES_RS03065	SM01086	C-terminal, D2-small domain, of ClpB protein
PAES_RS03105	SM00382	ATPases associated with a variety of cellular activities
PAES_RS03310	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PAES_RS03310	SM00382	ATPases associated with a variety of cellular activities
PAES_RS03315	SM00316	Ribosomal protein S1-like RNA-binding domain
PAES_RS03315	SM00357	Cold shock protein domain
PAES_RS03315	SM00955	PAES_RS03315
PAES_RS03335	SM00387	Histidine kinase-like ATPases
PAES_RS03335	SM00448	cheY-homologous receiver domain
PAES_RS03385	SM00883	Chaperonin 10 Kd subunit
PAES_RS03445	SM00268	Actin
PAES_RS03570	SM00883	Chaperonin 10 Kd subunit
PAES_RS03590	SM00382	ATPases associated with a variety of cellular activities
PAES_RS03620	SM00487	DEAD-like helicases superfamily
PAES_RS03620	SM00490	helicase superfamily c-terminal domain
PAES_RS03640	SM00849	Metallo-beta-lactamase superfamily
PAES_RS03640	SM01027	Beta-Casp domain
PAES_RS03675	SM00822	PAES_RS03675
PAES_RS03680	SM00357	Cold shock protein domain
PAES_RS03690	SM00917	LeuA allosteric (dimerisation) domain
PAES_RS03705	SM00917	LeuA allosteric (dimerisation) domain
PAES_RS03710	SM01329	PAES_RS03710
PAES_RS03795	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PAES_RS03815	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
PAES_RS03815	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
PAES_RS03835	SM00487	DEAD-like helicases superfamily
PAES_RS03835	SM00490	helicase superfamily c-terminal domain
PAES_RS03835	SM00982	PAES_RS03835
PAES_RS03835	SM01058	CarD-like/TRCF domain
PAES_RS03840	SM00382	ATPases associated with a variety of cellular activities
PAES_RS03845	SM00448	cheY-homologous receiver domain
PAES_RS03845	SM00862	Transcriptional regulatory protein, C terminal
PAES_RS03850	SM00091	PAS domain
PAES_RS03850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PAES_RS03850	SM00387	Histidine kinase-like ATPases
PAES_RS03850	SM00388	His Kinase A (phosphoacceptor) domain
PAES_RS03865	SM00849	Metallo-beta-lactamase superfamily
PAES_RS03895	SM00966	SpoVT / AbrB like domain 
PAES_RS03900	SM00327	von Willebrand factor (vWF) type A domain
PAES_RS03915	SM00382	ATPases associated with a variety of cellular activities
PAES_RS04005	SM00347	helix_turn_helix multiple antibiotic resistance protein
PAES_RS04025	SM00996	S-adenosyl-L-homocysteine hydrolase
PAES_RS04025	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
PAES_RS04045	SM00347	helix_turn_helix multiple antibiotic resistance protein
PAES_RS04090	SM00873	B3/4 domain
PAES_RS04090	SM00874	tRNA synthetase B5 domain
PAES_RS04090	SM00896	Ferredoxin-fold anticodon binding domain
PAES_RS04105	SM00322	K homology RNA-binding domain
PAES_RS04105	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAES_RS04175	SM00382	ATPases associated with a variety of cellular activities
PAES_RS04225	SM00028	Tetratricopeptide repeats
PAES_RS04380	SM00244	prohibitin homologues
PAES_RS04390	SM00382	ATPases associated with a variety of cellular activities
PAES_RS04420	SM00650	Ribosomal RNA adenine dimethylases
PAES_RS04425	SM00861	Transketolase, pyrimidine binding domain
PAES_RS04435	SM00493	PAES_RS04435
PAES_RS04465	SM00028	Tetratricopeptide repeats
PAES_RS04470	SM00382	ATPases associated with a variety of cellular activities
PAES_RS04590	SM00387	Histidine kinase-like ATPases
PAES_RS04645	SM00481	DNA polymerase alpha chain like domain
PAES_RS04665	SM00382	ATPases associated with a variety of cellular activities
PAES_RS04665	SM00448	cheY-homologous receiver domain
PAES_RS04715	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAES_RS04720	SM00014	Acid phosphatase homologues
PAES_RS04735	SM00563	Phosphate acyltransferases
PAES_RS04770	SM00382	ATPases associated with a variety of cellular activities
PAES_RS04830	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PAES_RS04830	SM00481	DNA polymerase alpha chain like domain
PAES_RS04830	SM00483	DNA polymerase X family
PAES_RS04925	SM00831	Cation transporter/ATPase, N-terminus
PAES_RS04960	SM00479	PAES_RS04960
PAES_RS05010	SM00957	SecA DEAD-like domain
PAES_RS05010	SM00958	SecA preprotein cross-linking domain
PAES_RS05040	SM00984	UDP binding domain
PAES_RS05075	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PAES_RS05075	SM00245	tail specific protease
PAES_RS05095	SM00382	ATPases associated with a variety of cellular activities
PAES_RS05095	SM00962	SRP54-type protein, GTPase domain
PAES_RS05095	SM00963	SRP54-type protein, helical bundle domain
PAES_RS05120	SM00849	Metallo-beta-lactamase superfamily
PAES_RS05125	SM00478	endonuclease III
PAES_RS05180	SM00880	PAES_RS05180
PAES_RS05200	SM00100	Cyclic nucleotide-monophosphate binding domain
PAES_RS05200	SM00116	Domain in cystathionine beta-synthase and other proteins.
PAES_RS05205	SM00479	PAES_RS05205
PAES_RS05260	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PAES_RS05260	SM00245	tail specific protease
PAES_RS05285	SM00479	PAES_RS05285
PAES_RS05305	SM00490	helicase superfamily c-terminal domain
PAES_RS05355	SM00460	Transglutaminase/protease-like homologues
PAES_RS05410	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PAES_RS05420	SM00267	diguanylate cyclase
PAES_RS05460	SM00382	ATPases associated with a variety of cellular activities
PAES_RS05490	SM00857	Resolvase, N terminal domain
PAES_RS05535	SM00857	Resolvase, N terminal domain
PAES_RS05540	SM00028	Tetratricopeptide repeats
PAES_RS05540	SM00255	Toll - interleukin 1 - resistance
PAES_RS05555	SM00382	ATPases associated with a variety of cellular activities
PAES_RS05560	SM00382	ATPases associated with a variety of cellular activities
PAES_RS05590	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PAES_RS05605	SM00226	Low molecular weight phosphatase family
PAES_RS05645	SM00028	Tetratricopeptide repeats
PAES_RS05720	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PAES_RS05725	SM00382	ATPases associated with a variety of cellular activities
PAES_RS05755	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS05765	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PAES_RS05820	SM00028	Tetratricopeptide repeats
PAES_RS05830	SM00478	endonuclease III
PAES_RS05855	SM00487	DEAD-like helicases superfamily
PAES_RS05855	SM00490	helicase superfamily c-terminal domain
PAES_RS05880	SM00382	ATPases associated with a variety of cellular activities
PAES_RS05880	SM01086	C-terminal, D2-small domain, of ClpB protein
PAES_RS05905	SM00382	ATPases associated with a variety of cellular activities
PAES_RS05920	SM00382	ATPases associated with a variety of cellular activities
PAES_RS05940	SM00740	PAES_RS05940
PAES_RS06005	SM00382	ATPases associated with a variety of cellular activities
PAES_RS06065	SM00382	ATPases associated with a variety of cellular activities
PAES_RS06070	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PAES_RS06070	SM00091	PAS domain
PAES_RS06070	SM00387	Histidine kinase-like ATPases
PAES_RS06070	SM00388	His Kinase A (phosphoacceptor) domain
PAES_RS06075	SM00448	cheY-homologous receiver domain
PAES_RS06150	SM00862	Transcriptional regulatory protein, C terminal
PAES_RS06195	SM00360	RNA recognition motif
PAES_RS06215	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
PAES_RS06345	SM00829	Enoylreductase
PAES_RS06350	SM00382	ATPases associated with a variety of cellular activities
PAES_RS06400	SM00382	ATPases associated with a variety of cellular activities
PAES_RS06405	SM00327	von Willebrand factor (vWF) type A domain
PAES_RS06440	SM00382	ATPases associated with a variety of cellular activities
PAES_RS06500	SM00382	ATPases associated with a variety of cellular activities
PAES_RS06550	SM00998	Adenylosuccinate lyase C-terminus
PAES_RS06575	SM00900	PAES_RS06575
PAES_RS06605	SM01321	PAES_RS06605
PAES_RS06620	SM00382	ATPases associated with a variety of cellular activities
PAES_RS06670	SM00255	Toll - interleukin 1 - resistance
PAES_RS06720	SM00938	Nitrogen regulatory protein P-II
PAES_RS06755	SM00382	ATPases associated with a variety of cellular activities
PAES_RS06860	SM00563	Phosphate acyltransferases
PAES_RS06945	SM01321	PAES_RS06945
PAES_RS06980	SM00226	Low molecular weight phosphatase family
PAES_RS07020	SM00342	helix_turn_helix, arabinose operon control protein
PAES_RS07090	SM01101	PAES_RS07090
PAES_RS07105	SM00487	DEAD-like helicases superfamily
PAES_RS07105	SM00490	helicase superfamily c-terminal domain
PAES_RS07110	SM00479	PAES_RS07110
PAES_RS07125	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS07135	SM00448	cheY-homologous receiver domain
PAES_RS07150	SM00116	Domain in cystathionine beta-synthase and other proteins.
PAES_RS07150	SM01240	PAES_RS07150
PAES_RS07180	SM00327	von Willebrand factor (vWF) type A domain
PAES_RS07180	SM00382	ATPases associated with a variety of cellular activities
PAES_RS07185	SM00382	ATPases associated with a variety of cellular activities
PAES_RS07195	SM00363	S4 RNA-binding domain
PAES_RS07230	SM00382	ATPases associated with a variety of cellular activities
PAES_RS07245	SM01321	PAES_RS07245
PAES_RS07255	SM01321	PAES_RS07255
PAES_RS07270	SM00318	Staphylococcal nuclease homologues
PAES_RS07275	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PAES_RS07330	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS07340	SM00530	Helix-turn-helix XRE-family like proteins 
PAES_RS07350	SM00382	ATPases associated with a variety of cellular activities
PAES_RS07365	SM01211	PAES_RS07365
PAES_RS07395	SM00881	CoA binding domain
PAES_RS07420	SM00382	ATPases associated with a variety of cellular activities
PAES_RS07460	SM01400	PAES_RS07460
PAES_RS07570	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS07605	SM01230	PAES_RS07605
PAES_RS07610	SM00344	helix_turn_helix ASNC type
PAES_RS07640	SM00382	ATPases associated with a variety of cellular activities
PAES_RS07640	SM00448	cheY-homologous receiver domain
PAES_RS07680	SM00838	Elongation factor G C-terminus
PAES_RS07730	SM01004	Delta-aminolevulinic acid dehydratase
PAES_RS07740	SM00971	Serine acetyltransferase, N-terminal
PAES_RS07775	SM00487	DEAD-like helicases superfamily
PAES_RS07775	SM00490	helicase superfamily c-terminal domain
PAES_RS07820	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PAES_RS07870	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
PAES_RS07880	SM00382	ATPases associated with a variety of cellular activities
PAES_RS07895	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PAES_RS07905	SM00271	DnaJ molecular chaperone homology domain
PAES_RS07930	SM00946	Prolyl-tRNA synthetase, C-terminal
PAES_RS07960	SM00382	ATPases associated with a variety of cellular activities
PAES_RS07975	SM00422	helix_turn_helix, mercury resistance
PAES_RS07980	SM00382	ATPases associated with a variety of cellular activities
PAES_RS07985	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS07990	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
PAES_RS07990	SM00534	ATPase domain of DNA mismatch repair MUTS family
PAES_RS08120	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PAES_RS08120	SM00382	ATPases associated with a variety of cellular activities
PAES_RS08135	SM00938	Nitrogen regulatory protein P-II
PAES_RS08140	SM00938	Nitrogen regulatory protein P-II
PAES_RS08165	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS08190	SM00387	Histidine kinase-like ATPases
PAES_RS08190	SM00388	His Kinase A (phosphoacceptor) domain
PAES_RS08190	SM00448	cheY-homologous receiver domain
PAES_RS08255	SM00465	GIY-YIG type nucleases (URI domain)
PAES_RS08260	SM00028	Tetratricopeptide repeats
PAES_RS08320	SM00382	ATPases associated with a variety of cellular activities
PAES_RS08325	SM00382	ATPases associated with a variety of cellular activities
PAES_RS08340	SM00014	Acid phosphatase homologues
PAES_RS08415	SM00642	Alpha-amylase domain
PAES_RS08425	SM00861	Transketolase, pyrimidine binding domain
PAES_RS08440	SM00463	Small MutS-related domain
PAES_RS08440	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
PAES_RS08440	SM00534	ATPase domain of DNA mismatch repair MUTS family
PAES_RS08460	SM00481	DNA polymerase alpha chain like domain
PAES_RS08470	SM00382	ATPases associated with a variety of cellular activities
PAES_RS08495	SM00798	AICARFT/IMPCHase bienzyme
PAES_RS08495	SM00851	MGS-like domain
PAES_RS08515	SM00518	AP endonuclease family 2
PAES_RS08585	SM00382	ATPases associated with a variety of cellular activities
PAES_RS08870	SM00642	Alpha-amylase domain
PAES_RS08895	SM01321	PAES_RS08895
PAES_RS08905	SM00382	ATPases associated with a variety of cellular activities
PAES_RS08915	SM00411	bacterial (prokaryotic) histone like domain
PAES_RS08935	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS08955	SM00316	Ribosomal protein S1-like RNA-binding domain
PAES_RS08995	SM01133	PAES_RS08995
PAES_RS09000	SM01007	Class II Aldolase and Adducin N-terminal domain
PAES_RS09015	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS09065	SM00843	PAES_RS09065
PAES_RS09085	SM00028	Tetratricopeptide repeats
PAES_RS09110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAES_RS09110	SM00954	Region found in RelA / SpoT proteins
PAES_RS09115	SM00487	DEAD-like helicases superfamily
PAES_RS09115	SM00490	helicase superfamily c-terminal domain
PAES_RS09130	SM00244	prohibitin homologues
PAES_RS09245	SM00226	Low molecular weight phosphatase family
PAES_RS09280	SM00487	DEAD-like helicases superfamily
PAES_RS09280	SM00490	helicase superfamily c-terminal domain
PAES_RS09320	SM01152	PAES_RS09320
PAES_RS09360	SM00028	Tetratricopeptide repeats
PAES_RS09385	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PAES_RS09420	SM00470	ParB-like nuclease domain
PAES_RS09435	SM00116	Domain in cystathionine beta-synthase and other proteins.
PAES_RS09435	SM00924	MgtE intracellular N domain
PAES_RS09455	SM01018	B12 binding domain
PAES_RS09490	SM00450	Rhodanese Homology Domain
PAES_RS09505	SM00861	Transketolase, pyrimidine binding domain
PAES_RS09520	SM01350	PAES_RS09520
PAES_RS09530	SM00897	FIST N domain
PAES_RS09530	SM01204	PAES_RS09530
PAES_RS09665	SM00382	ATPases associated with a variety of cellular activities
PAES_RS09670	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS09675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAES_RS09705	SM00116	Domain in cystathionine beta-synthase and other proteins.
PAES_RS09710	SM01005	Alanine racemase, C-terminal domain
PAES_RS09725	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PAES_RS09735	SM00382	ATPases associated with a variety of cellular activities
PAES_RS09760	SM00905	Dihydroneopterin aldolase
PAES_RS09840	SM00869	Autotransporter beta-domain
PAES_RS09860	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS09950	SM00320	WD40 repeats
PAES_RS09980	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS10000	SM00530	Helix-turn-helix XRE-family like proteins 
PAES_RS10015	SM01091	Transporter associated domain
PAES_RS10020	SM00562	PAES_RS10020
PAES_RS10065	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS10095	SM00255	Toll - interleukin 1 - resistance
PAES_RS10130	SM00788	Adenylosuccinate synthetase
PAES_RS10140	SM00840	PAES_RS10140
PAES_RS10160	SM00662	RNA polymerases D
PAES_RS10165	SM00363	S4 RNA-binding domain
PAES_RS10165	SM01390	PAES_RS10165
PAES_RS10180	SM00316	Ribosomal protein S1-like RNA-binding domain
PAES_RS10235	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PAES_RS10245	SM01374	PAES_RS10245
PAES_RS10265	SM00322	K homology RNA-binding domain
PAES_RS10280	SM01382	PAES_RS10280
PAES_RS10280	SM01383	PAES_RS10280
PAES_RS10300	SM01403	PAES_RS10300
PAES_RS10310	SM00838	Elongation factor G C-terminus
PAES_RS10310	SM00889	Elongation factor G, domain IV
PAES_RS10370	SM00845	GatB domain
PAES_RS10380	SM00382	ATPases associated with a variety of cellular activities
PAES_RS10395	SM00327	von Willebrand factor (vWF) type A domain
PAES_RS10400	SM00327	von Willebrand factor (vWF) type A domain
PAES_RS10500	SM00382	ATPases associated with a variety of cellular activities
PAES_RS10515	SM01323	PAES_RS10515
PAES_RS10520	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
PAES_RS10535	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS10580	SM00852	Probable molybdopterin binding domain
PAES_RS10585	SM00852	Probable molybdopterin binding domain
PAES_RS10590	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS10640	SM00900	PAES_RS10640
PAES_RS10655	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PAES_RS10760	SM00732	Likely ribonuclease with RNase H fold.
PAES_RS10785	SM00028	Tetratricopeptide repeats
PAES_RS10800	SM00382	ATPases associated with a variety of cellular activities
PAES_RS10800	SM01086	C-terminal, D2-small domain, of ClpB protein
PAES_RS10815	SM00855	Phosphoglycerate mutase family
PAES_RS10825	SM01207	PAES_RS10825
PAES_RS10865	SM00915	Jacalin-like lectin domain
PAES_RS10900	SM00729	Elongator protein 3, MiaB family, Radical SAM
PAES_RS10900	SM00876	Biotin and Thiamin Synthesis associated domain
PAES_RS10910	SM00387	Histidine kinase-like ATPases
PAES_RS10910	SM00448	cheY-homologous receiver domain
PAES_RS10970	SM00382	ATPases associated with a variety of cellular activities
PAES_RS10975	SM00382	ATPases associated with a variety of cellular activities
PAES_RS10995	SM00646	PAES_RS10995
PAES_RS11000	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
PAES_RS11000	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
PAES_RS11000	SM00493	PAES_RS11000
PAES_RS11010	SM00899	PAES_RS11010
PAES_RS11065	SM00098	Alkaline phosphatase homologues
PAES_RS11110	SM00255	Toll - interleukin 1 - resistance
PAES_RS11130	SM00836	DALR anticodon binding domain
PAES_RS11130	SM01016	Arginyl tRNA synthetase N terminal dom
PAES_RS11235	SM00864	Tubulin/FtsZ family, GTPase domain
PAES_RS11235	SM00865	Tubulin/FtsZ family, C-terminal domain
PAES_RS11240	SM00842	Cell division protein FtsA
PAES_RS11290	SM00740	PAES_RS11290
PAES_RS11315	SM00830	Chorismate mutase type II
PAES_RS11330	SM01160	PAES_RS11330
PAES_RS11355	SM00028	Tetratricopeptide repeats
PAES_RS11420	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PAES_RS11420	SM00091	PAS domain
PAES_RS11440	SM00320	WD40 repeats
PAES_RS11535	SM00901	PAES_RS11535
PAES_RS11580	SM00014	Acid phosphatase homologues
PAES_RS11590	SM01234	PAES_RS11590
PAES_RS11950	SM00255	Toll - interleukin 1 - resistance
PAES_RS11960	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PAES_RS11960	SM00091	PAS domain
PAES_RS11960	SM00387	Histidine kinase-like ATPases
PAES_RS11960	SM00388	His Kinase A (phosphoacceptor) domain
PAES_RS11960	SM00448	cheY-homologous receiver domain
PAES_RS12065	SM00257	Lysin motif
PAES_RS12075	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PAES_RS12075	SM00091	PAS domain
PAES_RS12075	SM00387	Histidine kinase-like ATPases
PAES_RS12075	SM00388	His Kinase A (phosphoacceptor) domain
PAES_RS12075	SM00448	cheY-homologous receiver domain
PAES_RS12110	SM01235	PAES_RS12110
PAES_RS12115	SM00387	Histidine kinase-like ATPases
PAES_RS12115	SM00388	His Kinase A (phosphoacceptor) domain
PAES_RS12115	SM00448	cheY-homologous receiver domain
PAES_RS12140	SM00098	Alkaline phosphatase homologues
PAES_RS12145	SM00729	Elongator protein 3, MiaB family, Radical SAM
