Ptc2401_RS00055	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
Ptc2401_RS00140	PWY-6683	sulfate reduction III (assimilatory)
Ptc2401_RS00145	PWY-5306	superpathway of thiosulfate metabolism (<i>Desulfovibrio sulfodismutans</i>)
Ptc2401_RS00145	PWY-5360	superpathway of tetrathionate reduction (<i>Salmonella typhimurium</i>)
Ptc2401_RS00145	PWY-6683	sulfate reduction III (assimilatory)
Ptc2401_RS00205	PWY-5194	siroheme biosynthesis
Ptc2401_RS00205	PWY-5441	S-methyl-L-methionine cycle
Ptc2401_RS00205	PWY-702	L-methionine biosynthesis II
Ptc2401_RS00205	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ptc2401_RS00210	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ptc2401_RS00210	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ptc2401_RS00210	PWY-5194	siroheme biosynthesis
Ptc2401_RS00210	PWY-5441	S-methyl-L-methionine cycle
Ptc2401_RS00210	PWY-702	L-methionine biosynthesis II
Ptc2401_RS00210	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ptc2401_RS00230	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS00245	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ptc2401_RS00345	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ptc2401_RS00345	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ptc2401_RS00385	PWY-7294	xylose degradation IV
Ptc2401_RS00385	PWY-7295	L-arabinose degradation IV
Ptc2401_RS00385	PWY-7560	methylerythritol phosphate pathway II
Ptc2401_RS00405	PWY-5686	UMP biosynthesis
Ptc2401_RS00410	PWY-6749	CMP-legionaminate biosynthesis I
Ptc2401_RS00460	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
Ptc2401_RS00460	PWY-5368	dimorphecolate biosynthesis
Ptc2401_RS00460	PWY-5995	linoleate biosynthesis I (plants)
Ptc2401_RS00460	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
Ptc2401_RS00460	PWY-6803	phosphatidylcholine acyl editing
Ptc2401_RS00460	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
Ptc2401_RS00460	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Ptc2401_RS00460	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Ptc2401_RS00460	PWY-7470	phosphatidylcholine biosynthesis VII
Ptc2401_RS00460	PWY-7618	ricinoleate biosynthesis
Ptc2401_RS00480	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Ptc2401_RS00480	PWY-7177	UTP and CTP dephosphorylation II
Ptc2401_RS00480	PWY-7185	UTP and CTP dephosphorylation I
Ptc2401_RS00650	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
Ptc2401_RS00650	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ptc2401_RS00650	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ptc2401_RS00685	PWY-5367	petroselinate biosynthesis
Ptc2401_RS00685	PWY-5515	L-arabinose degradation II
Ptc2401_RS00685	PWY-5525	D-glucuronate degradation I
Ptc2401_RS00685	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Ptc2401_RS00685	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Ptc2401_RS00685	PWY-5989	stearate biosynthesis II (bacteria and plants)
Ptc2401_RS00685	PWY-5994	palmitate biosynthesis I (animals and fungi)
Ptc2401_RS00685	PWY-6113	superpathway of mycolate biosynthesis
Ptc2401_RS00685	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Ptc2401_RS00685	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ptc2401_RS00685	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ptc2401_RS00685	PWY-7663	gondoate biosynthesis (anaerobic)
Ptc2401_RS00685	PWY-7664	oleate biosynthesis IV (anaerobic)
Ptc2401_RS00685	PWYG-321	mycolate biosynthesis
Ptc2401_RS00690	PWY-4381	fatty acid biosynthesis initiation I
Ptc2401_RS00690	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Ptc2401_RS00690	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ptc2401_RS00695	PWY-4381	fatty acid biosynthesis initiation I
Ptc2401_RS00720	PWY-6871	3-methylbutanol biosynthesis
Ptc2401_RS00765	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ptc2401_RS00810	PWY-2622	trehalose biosynthesis IV
Ptc2401_RS00930	PWY-4061	glutathione-mediated detoxification I
Ptc2401_RS00930	PWY-6842	glutathione-mediated detoxification II
Ptc2401_RS00930	PWY-7112	4-hydroxy-2-nonenal detoxification
Ptc2401_RS00965	PWY-6599	guanine and guanosine salvage II
Ptc2401_RS00965	PWY-6609	adenine and adenosine salvage III
Ptc2401_RS00965	PWY-6610	adenine and adenosine salvage IV
Ptc2401_RS00965	PWY-6620	guanine and guanosine salvage
Ptc2401_RS00970	PWY-6012	acyl carrier protein metabolism I
Ptc2401_RS00970	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Ptc2401_RS01115	PWY-3781	aerobic respiration I (cytochrome c)
Ptc2401_RS01115	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Ptc2401_RS01115	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ptc2401_RS01115	PWY-5690	TCA cycle II (plants and fungi)
Ptc2401_RS01115	PWY-6728	methylaspartate cycle
Ptc2401_RS01115	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ptc2401_RS01115	PWY-7254	TCA cycle VII (acetate-producers)
Ptc2401_RS01115	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ptc2401_RS01120	PWY-3781	aerobic respiration I (cytochrome c)
Ptc2401_RS01120	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Ptc2401_RS01120	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ptc2401_RS01120	PWY-5690	TCA cycle II (plants and fungi)
Ptc2401_RS01120	PWY-6728	methylaspartate cycle
Ptc2401_RS01120	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ptc2401_RS01120	PWY-7254	TCA cycle VII (acetate-producers)
Ptc2401_RS01120	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ptc2401_RS01130	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ptc2401_RS01130	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ptc2401_RS01145	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Ptc2401_RS01150	PWY-6167	flavin biosynthesis II (archaea)
Ptc2401_RS01150	PWY-6168	flavin biosynthesis III (fungi)
Ptc2401_RS01155	PWY-5667	CDP-diacylglycerol biosynthesis I
Ptc2401_RS01155	PWY-5981	CDP-diacylglycerol biosynthesis III
Ptc2401_RS01155	PWY-6453	stigma estolide biosynthesis
Ptc2401_RS01155	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Ptc2401_RS01155	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Ptc2401_RS01155	PWY-7587	oleate biosynthesis III (cyanobacteria)
Ptc2401_RS01155	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
Ptc2401_RS01165	PWY-702	L-methionine biosynthesis II
Ptc2401_RS01170	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS01180	PWY-2941	L-lysine biosynthesis II
Ptc2401_RS01180	PWY-2942	L-lysine biosynthesis III
Ptc2401_RS01180	PWY-5097	L-lysine biosynthesis VI
Ptc2401_RS01180	PWY-6559	spermidine biosynthesis II
Ptc2401_RS01180	PWY-6562	norspermidine biosynthesis
Ptc2401_RS01180	PWY-7153	grixazone biosynthesis
Ptc2401_RS01215	PWY-2941	L-lysine biosynthesis II
Ptc2401_RS01215	PWY-5097	L-lysine biosynthesis VI
Ptc2401_RS01220	PWY-101	photosynthesis light reactions
Ptc2401_RS01240	PWY-1042	glycolysis IV (plant cytosol)
Ptc2401_RS01240	PWY-1622	formaldehyde assimilation I (serine pathway)
Ptc2401_RS01240	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Ptc2401_RS01240	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ptc2401_RS01240	PWY-5723	Rubisco shunt
Ptc2401_RS01240	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ptc2401_RS01240	PWY-6886	1-butanol autotrophic biosynthesis
Ptc2401_RS01240	PWY-6901	superpathway of glucose and xylose degradation
Ptc2401_RS01240	PWY-7003	glycerol degradation to butanol
Ptc2401_RS01240	PWY-7124	ethylene biosynthesis V (engineered)
Ptc2401_RS01240	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Ptc2401_RS01335	PWY-4381	fatty acid biosynthesis initiation I
Ptc2401_RS01335	PWY-5743	3-hydroxypropanoate cycle
Ptc2401_RS01335	PWY-5744	glyoxylate assimilation
Ptc2401_RS01335	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ptc2401_RS01335	PWY-6679	jadomycin biosynthesis
Ptc2401_RS01335	PWY-6722	candicidin biosynthesis
Ptc2401_RS01335	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ptc2401_RS01345	PWY-5392	reductive TCA cycle II
Ptc2401_RS01345	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ptc2401_RS01385	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS01415	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Ptc2401_RS01415	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ptc2401_RS01415	PWY-6268	adenosylcobalamin salvage from cobalamin
Ptc2401_RS01415	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ptc2401_RS01450	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Ptc2401_RS01450	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Ptc2401_RS01450	PWY-6896	thiamin salvage I
Ptc2401_RS01450	PWY-6897	thiamin salvage II
Ptc2401_RS01505	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Ptc2401_RS01505	PWY-5491	diethylphosphate degradation
Ptc2401_RS01540	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Ptc2401_RS01540	PWY-5491	diethylphosphate degradation
Ptc2401_RS01615	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Ptc2401_RS01725	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ptc2401_RS01795	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ptc2401_RS01815	PWY-5667	CDP-diacylglycerol biosynthesis I
Ptc2401_RS01815	PWY-5981	CDP-diacylglycerol biosynthesis III
Ptc2401_RS01870	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Ptc2401_RS01870	PWY-6167	flavin biosynthesis II (archaea)
Ptc2401_RS01870	PWY-6168	flavin biosynthesis III (fungi)
Ptc2401_RS01885	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS01895	PWY-5386	methylglyoxal degradation I
Ptc2401_RS01920	PWY-5155	&beta;-alanine biosynthesis III
Ptc2401_RS01945	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Ptc2401_RS01945	PWY-6174	mevalonate pathway II (archaea)
Ptc2401_RS01945	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Ptc2401_RS01945	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Ptc2401_RS01945	PWY-7102	bisabolene biosynthesis
Ptc2401_RS01945	PWY-7391	isoprene biosynthesis II (engineered)
Ptc2401_RS01945	PWY-7524	mevalonate pathway III (archaea)
Ptc2401_RS01945	PWY-7560	methylerythritol phosphate pathway II
Ptc2401_RS01945	PWY-922	mevalonate pathway I
Ptc2401_RS01960	PWY-6749	CMP-legionaminate biosynthesis I
Ptc2401_RS01980	PWY-2161	folate polyglutamylation
Ptc2401_RS01985	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS02045	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Ptc2401_RS02050	PWY-5392	reductive TCA cycle II
Ptc2401_RS02050	PWY-5537	pyruvate fermentation to acetate V
Ptc2401_RS02050	PWY-5538	pyruvate fermentation to acetate VI
Ptc2401_RS02050	PWY-5690	TCA cycle II (plants and fungi)
Ptc2401_RS02050	PWY-5913	TCA cycle VI (obligate autotrophs)
Ptc2401_RS02050	PWY-6728	methylaspartate cycle
Ptc2401_RS02050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ptc2401_RS02050	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ptc2401_RS02095	PWY-6749	CMP-legionaminate biosynthesis I
Ptc2401_RS02100	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Ptc2401_RS02100	PWY-622	starch biosynthesis
Ptc2401_RS02175	PWY-5839	menaquinol-7 biosynthesis
Ptc2401_RS02175	PWY-5844	menaquinol-9 biosynthesis
Ptc2401_RS02175	PWY-5849	menaquinol-6 biosynthesis
Ptc2401_RS02175	PWY-5890	menaquinol-10 biosynthesis
Ptc2401_RS02175	PWY-5891	menaquinol-11 biosynthesis
Ptc2401_RS02175	PWY-5892	menaquinol-12 biosynthesis
Ptc2401_RS02175	PWY-5895	menaquinol-13 biosynthesis
Ptc2401_RS02205	PWY-101	photosynthesis light reactions
Ptc2401_RS02205	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Ptc2401_RS02255	PWY-5958	acridone alkaloid biosynthesis
Ptc2401_RS02255	PWY-6543	4-aminobenzoate biosynthesis
Ptc2401_RS02255	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Ptc2401_RS02255	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Ptc2401_RS02290	PWY-6614	tetrahydrofolate biosynthesis
Ptc2401_RS02340	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
Ptc2401_RS02345	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Ptc2401_RS02360	PWY-5269	cardiolipin biosynthesis II
Ptc2401_RS02360	PWY-5668	cardiolipin biosynthesis I
Ptc2401_RS02365	PWY-5269	cardiolipin biosynthesis II
Ptc2401_RS02365	PWY-5668	cardiolipin biosynthesis I
Ptc2401_RS02370	PWY-6891	thiazole biosynthesis II (Bacillus)
Ptc2401_RS02370	PWY-6892	thiazole biosynthesis I (E. coli)
Ptc2401_RS02370	PWY-7560	methylerythritol phosphate pathway II
Ptc2401_RS02410	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Ptc2401_RS02410	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Ptc2401_RS02410	PWY-5989	stearate biosynthesis II (bacteria and plants)
Ptc2401_RS02410	PWY-6113	superpathway of mycolate biosynthesis
Ptc2401_RS02410	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Ptc2401_RS02410	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ptc2401_RS02410	PWY-7663	gondoate biosynthesis (anaerobic)
Ptc2401_RS02410	PWY-7664	oleate biosynthesis IV (anaerobic)
Ptc2401_RS02410	PWYG-321	mycolate biosynthesis
Ptc2401_RS02420	PWY-5913	TCA cycle VI (obligate autotrophs)
Ptc2401_RS02420	PWY-6549	L-glutamine biosynthesis III
Ptc2401_RS02420	PWY-6728	methylaspartate cycle
Ptc2401_RS02420	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ptc2401_RS02420	PWY-7124	ethylene biosynthesis V (engineered)
Ptc2401_RS02420	PWY-7254	TCA cycle VII (acetate-producers)
Ptc2401_RS02420	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Ptc2401_RS02445	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ptc2401_RS02445	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ptc2401_RS02445	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ptc2401_RS02445	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Ptc2401_RS02460	PWY-6825	phosphatidylcholine biosynthesis V
Ptc2401_RS02480	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ptc2401_RS02480	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ptc2401_RS02480	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ptc2401_RS02490	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ptc2401_RS02490	PWY-5686	UMP biosynthesis
Ptc2401_RS02490	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ptc2401_RS02500	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ptc2401_RS02500	PWY-5723	Rubisco shunt
Ptc2401_RS02520	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Ptc2401_RS02535	PWY-5269	cardiolipin biosynthesis II
Ptc2401_RS02535	PWY-5668	cardiolipin biosynthesis I
Ptc2401_RS02540	PWY-2201	folate transformations I
Ptc2401_RS02540	PWY-5497	purine nucleobases degradation II (anaerobic)
Ptc2401_RS02540	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Ptc2401_RS02540	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Ptc2401_RS02540	PWY-5989	stearate biosynthesis II (bacteria and plants)
Ptc2401_RS02540	PWY-5994	palmitate biosynthesis I (animals and fungi)
Ptc2401_RS02540	PWY-6113	superpathway of mycolate biosynthesis
Ptc2401_RS02540	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Ptc2401_RS02540	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ptc2401_RS02540	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ptc2401_RS02540	PWY-7663	gondoate biosynthesis (anaerobic)
Ptc2401_RS02540	PWY-7664	oleate biosynthesis IV (anaerobic)
Ptc2401_RS02540	PWYG-321	mycolate biosynthesis
Ptc2401_RS02545	PWY-2301	<i>myo</i>-inositol biosynthesis
Ptc2401_RS02545	PWY-4702	phytate degradation I
Ptc2401_RS02545	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Ptc2401_RS02595	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Ptc2401_RS02595	PWY-7118	chitin degradation to ethanol
Ptc2401_RS02615	PWY-2201	folate transformations I
Ptc2401_RS02640	PWY-6700	queuosine biosynthesis
Ptc2401_RS02710	PWY-2941	L-lysine biosynthesis II
Ptc2401_RS02710	PWY-2942	L-lysine biosynthesis III
Ptc2401_RS02710	PWY-5097	L-lysine biosynthesis VI
Ptc2401_RS02730	PWY-5669	phosphatidylethanolamine biosynthesis I
Ptc2401_RS02775	PWY-5057	L-valine degradation II
Ptc2401_RS02775	PWY-5076	L-leucine degradation III
Ptc2401_RS02775	PWY-5078	L-isoleucine degradation II
Ptc2401_RS02775	PWY-5101	L-isoleucine biosynthesis II
Ptc2401_RS02775	PWY-5103	L-isoleucine biosynthesis III
Ptc2401_RS02775	PWY-5104	L-isoleucine biosynthesis IV
Ptc2401_RS02775	PWY-5108	L-isoleucine biosynthesis V
Ptc2401_RS02780	PWY-1042	glycolysis IV (plant cytosol)
Ptc2401_RS02780	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ptc2401_RS02780	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ptc2401_RS02780	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ptc2401_RS02790	PWY-7560	methylerythritol phosphate pathway II
Ptc2401_RS02800	PWY-5941	glycogen degradation II (eukaryotic)
Ptc2401_RS02800	PWY-6731	starch degradation III
Ptc2401_RS02800	PWY-6737	starch degradation V
Ptc2401_RS02800	PWY-7238	sucrose biosynthesis II
Ptc2401_RS02880	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ptc2401_RS02880	PWY-5686	UMP biosynthesis
Ptc2401_RS02880	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ptc2401_RS02885	PWY-6167	flavin biosynthesis II (archaea)
Ptc2401_RS02885	PWY-6168	flavin biosynthesis III (fungi)
Ptc2401_RS02885	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Ptc2401_RS02890	PWY-1622	formaldehyde assimilation I (serine pathway)
Ptc2401_RS02890	PWY-181	photorespiration
Ptc2401_RS02890	PWY-2161	folate polyglutamylation
Ptc2401_RS02890	PWY-2201	folate transformations I
Ptc2401_RS02890	PWY-3661	glycine betaine degradation I
Ptc2401_RS02890	PWY-3661-1	glycine betaine degradation II (mammalian)
Ptc2401_RS02890	PWY-3841	folate transformations II
Ptc2401_RS02890	PWY-5497	purine nucleobases degradation II (anaerobic)
Ptc2401_RS02910	PWY-101	photosynthesis light reactions
Ptc2401_RS02910	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Ptc2401_RS02915	PWY-5839	menaquinol-7 biosynthesis
Ptc2401_RS02915	PWY-5851	demethylmenaquinol-9 biosynthesis
Ptc2401_RS02915	PWY-5852	demethylmenaquinol-8 biosynthesis I
Ptc2401_RS02915	PWY-5853	demethylmenaquinol-6 biosynthesis I
Ptc2401_RS02915	PWY-5890	menaquinol-10 biosynthesis
Ptc2401_RS02915	PWY-5891	menaquinol-11 biosynthesis
Ptc2401_RS02915	PWY-5892	menaquinol-12 biosynthesis
Ptc2401_RS02915	PWY-5895	menaquinol-13 biosynthesis
Ptc2401_RS02940	PWY-43	putrescine biosynthesis II
Ptc2401_RS02945	PWY-1622	formaldehyde assimilation I (serine pathway)
Ptc2401_RS02945	PWY-5392	reductive TCA cycle II
Ptc2401_RS02945	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ptc2401_RS02945	PWY-5690	TCA cycle II (plants and fungi)
Ptc2401_RS02945	PWY-5913	TCA cycle VI (obligate autotrophs)
Ptc2401_RS02945	PWY-6728	methylaspartate cycle
Ptc2401_RS02945	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ptc2401_RS02945	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Ptc2401_RS02945	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ptc2401_RS03000	PWY-7560	methylerythritol phosphate pathway II
Ptc2401_RS03050	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ptc2401_RS03050	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ptc2401_RS03055	PWY-1042	glycolysis IV (plant cytosol)
Ptc2401_RS03055	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ptc2401_RS03055	PWY-6901	superpathway of glucose and xylose degradation
Ptc2401_RS03055	PWY-7003	glycerol degradation to butanol
Ptc2401_RS03080	PWY-3341	L-proline biosynthesis III
Ptc2401_RS03080	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Ptc2401_RS03125	PWY-5958	acridone alkaloid biosynthesis
Ptc2401_RS03125	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Ptc2401_RS03125	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Ptc2401_RS03145	PWY-1042	glycolysis IV (plant cytosol)
Ptc2401_RS03145	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ptc2401_RS03145	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ptc2401_RS03145	PWY-7003	glycerol degradation to butanol
Ptc2401_RS03155	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Ptc2401_RS03180	PWY-6936	seleno-amino acid biosynthesis
Ptc2401_RS03180	PWY-7274	D-cycloserine biosynthesis
Ptc2401_RS03185	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ptc2401_RS03190	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ptc2401_RS03190	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ptc2401_RS03205	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ptc2401_RS03205	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ptc2401_RS03210	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ptc2401_RS03210	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ptc2401_RS03215	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ptc2401_RS03230	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
Ptc2401_RS03255	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ptc2401_RS03255	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ptc2401_RS03255	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ptc2401_RS03255	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Ptc2401_RS03285	PWY-381	nitrate reduction II (assimilatory)
Ptc2401_RS03285	PWY-5675	nitrate reduction V (assimilatory)
Ptc2401_RS03285	PWY-6549	L-glutamine biosynthesis III
Ptc2401_RS03285	PWY-6963	ammonia assimilation cycle I
Ptc2401_RS03285	PWY-6964	ammonia assimilation cycle II
Ptc2401_RS03300	PWY-3961	phosphopantothenate biosynthesis II
Ptc2401_RS03305	PWY-6164	3-dehydroquinate biosynthesis I
Ptc2401_RS03310	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ptc2401_RS03330	PWY-6700	queuosine biosynthesis
Ptc2401_RS03415	PWY-2941	L-lysine biosynthesis II
Ptc2401_RS03415	PWY-2942	L-lysine biosynthesis III
Ptc2401_RS03415	PWY-5097	L-lysine biosynthesis VI
Ptc2401_RS03420	PWY-2201	folate transformations I
Ptc2401_RS03420	PWY-3841	folate transformations II
Ptc2401_RS03495	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ptc2401_RS03495	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ptc2401_RS03515	PWY-6654	phosphopantothenate biosynthesis III
Ptc2401_RS03520	PWY-5669	phosphatidylethanolamine biosynthesis I
Ptc2401_RS03525	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ptc2401_RS03525	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ptc2401_RS03525	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ptc2401_RS03530	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ptc2401_RS03530	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ptc2401_RS03530	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ptc2401_RS03580	PWY-7560	methylerythritol phosphate pathway II
Ptc2401_RS03585	PWY-6700	queuosine biosynthesis
Ptc2401_RS03600	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ptc2401_RS03600	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ptc2401_RS03600	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ptc2401_RS03600	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Ptc2401_RS03600	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ptc2401_RS03600	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ptc2401_RS03635	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Ptc2401_RS03635	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Ptc2401_RS03640	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ptc2401_RS03640	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ptc2401_RS03645	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ptc2401_RS03645	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ptc2401_RS03650	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ptc2401_RS03650	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ptc2401_RS03670	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Ptc2401_RS03670	PWY-6596	adenosine nucleotides degradation I
Ptc2401_RS03670	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS03755	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
Ptc2401_RS03780	PWY-6123	inosine-5'-phosphate biosynthesis I
Ptc2401_RS03780	PWY-6124	inosine-5'-phosphate biosynthesis II
Ptc2401_RS03780	PWY-7234	inosine-5'-phosphate biosynthesis III
Ptc2401_RS03795	PWY-6891	thiazole biosynthesis II (Bacillus)
Ptc2401_RS03795	PWY-6892	thiazole biosynthesis I (E. coli)
Ptc2401_RS03795	PWY-7560	methylerythritol phosphate pathway II
Ptc2401_RS03800	PWY-6825	phosphatidylcholine biosynthesis V
Ptc2401_RS03845	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ptc2401_RS03845	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ptc2401_RS03845	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ptc2401_RS03870	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ptc2401_RS03870	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ptc2401_RS03870	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ptc2401_RS03880	PWY-3221	dTDP-L-rhamnose biosynthesis II
Ptc2401_RS03880	PWY-6808	dTDP-D-forosamine biosynthesis
Ptc2401_RS03880	PWY-6942	dTDP-D-desosamine biosynthesis
Ptc2401_RS03880	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Ptc2401_RS03880	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Ptc2401_RS03880	PWY-6974	dTDP-L-olivose biosynthesis
Ptc2401_RS03880	PWY-6976	dTDP-L-mycarose biosynthesis
Ptc2401_RS03880	PWY-7104	dTDP-L-megosamine biosynthesis
Ptc2401_RS03880	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Ptc2401_RS03880	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Ptc2401_RS03880	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Ptc2401_RS03880	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Ptc2401_RS03880	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Ptc2401_RS03880	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Ptc2401_RS03880	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Ptc2401_RS03880	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Ptc2401_RS03880	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
Ptc2401_RS03880	PWY-7688	Ptc2401_RS03880
Ptc2401_RS03885	PWY-3221	dTDP-L-rhamnose biosynthesis II
Ptc2401_RS03885	PWY-6808	dTDP-D-forosamine biosynthesis
Ptc2401_RS03885	PWY-6942	dTDP-D-desosamine biosynthesis
Ptc2401_RS03885	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Ptc2401_RS03885	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Ptc2401_RS03885	PWY-6974	dTDP-L-olivose biosynthesis
Ptc2401_RS03885	PWY-6976	dTDP-L-mycarose biosynthesis
Ptc2401_RS03885	PWY-7104	dTDP-L-megosamine biosynthesis
Ptc2401_RS03885	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Ptc2401_RS03885	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Ptc2401_RS03885	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Ptc2401_RS03885	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Ptc2401_RS03885	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Ptc2401_RS03885	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Ptc2401_RS03885	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Ptc2401_RS03885	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Ptc2401_RS03885	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
Ptc2401_RS03885	PWY-7688	Ptc2401_RS03885
Ptc2401_RS03935	PWY-5757	fosfomycin biosynthesis
Ptc2401_RS03935	PWY-6322	phosphinothricin tripeptide biosynthesis
Ptc2401_RS03935	PWY-6682	dehydrophos biosynthesis
Ptc2401_RS03935	PWY-6839	2-aminoethylphosphonate biosynthesis
Ptc2401_RS03935	PWY-7510	rhizocticin A and B biosynthesis
Ptc2401_RS03940	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ptc2401_RS03940	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ptc2401_RS03990	PWY-5481	pyruvate fermentation to lactate
Ptc2401_RS03990	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Ptc2401_RS03990	PWY-6901	superpathway of glucose and xylose degradation
Ptc2401_RS04000	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Ptc2401_RS04000	PWY-5739	GDP-D-perosamine biosynthesis
Ptc2401_RS04000	PWY-5740	GDP-L-colitose biosynthesis
Ptc2401_RS04000	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Ptc2401_RS04000	PWY-7573	GDP-mycosamine biosynthesis
Ptc2401_RS04095	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
Ptc2401_RS04780	PWY-2723	trehalose degradation V
Ptc2401_RS04780	PWY-3801	sucrose degradation II (sucrose synthase)
Ptc2401_RS04780	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Ptc2401_RS04780	PWY-5661	GDP-glucose biosynthesis
Ptc2401_RS04780	PWY-5940	streptomycin biosynthesis
Ptc2401_RS04780	PWY-5941	glycogen degradation II (eukaryotic)
Ptc2401_RS04780	PWY-622	starch biosynthesis
Ptc2401_RS04780	PWY-6731	starch degradation III
Ptc2401_RS04780	PWY-6737	starch degradation V
Ptc2401_RS04780	PWY-6749	CMP-legionaminate biosynthesis I
Ptc2401_RS04780	PWY-7238	sucrose biosynthesis II
Ptc2401_RS04780	PWY-7343	UDP-glucose biosynthesis
Ptc2401_RS04810	PWY-5392	reductive TCA cycle II
Ptc2401_RS04810	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ptc2401_RS04810	PWY-5690	TCA cycle II (plants and fungi)
Ptc2401_RS04810	PWY-5913	TCA cycle VI (obligate autotrophs)
Ptc2401_RS04810	PWY-6728	methylaspartate cycle
Ptc2401_RS04810	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ptc2401_RS04810	PWY-7254	TCA cycle VII (acetate-producers)
Ptc2401_RS04810	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ptc2401_RS04820	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ptc2401_RS04820	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ptc2401_RS04820	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ptc2401_RS04830	PWY-5381	pyridine nucleotide cycling (plants)
Ptc2401_RS04835	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ptc2401_RS04835	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
Ptc2401_RS04860	PWY-6339	syringate degradation
Ptc2401_RS04870	PWY-6339	syringate degradation
Ptc2401_RS05080	PWY-6938	NADH repair
Ptc2401_RS05085	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ptc2401_RS05085	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ptc2401_RS05085	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ptc2401_RS05120	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Ptc2401_RS05125	PWY-6910	hydroxymethylpyrimidine salvage
Ptc2401_RS05125	PWY-7356	thiamin salvage IV (yeast)
Ptc2401_RS05125	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Ptc2401_RS05130	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Ptc2401_RS05130	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Ptc2401_RS05130	PWY-6897	thiamin salvage II
Ptc2401_RS05130	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Ptc2401_RS05130	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Ptc2401_RS05130	PWY-7356	thiamin salvage IV (yeast)
Ptc2401_RS05130	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Ptc2401_RS05135	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Ptc2401_RS05135	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Ptc2401_RS05135	PWY-6897	thiamin salvage II
Ptc2401_RS05135	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Ptc2401_RS05135	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Ptc2401_RS05135	PWY-7356	thiamin salvage IV (yeast)
Ptc2401_RS05135	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Ptc2401_RS05140	PWY-5532	adenosine nucleotides degradation IV
Ptc2401_RS05185	PWY-6829	tRNA methylation (yeast)
Ptc2401_RS05185	PWY-7285	methylwyosine biosynthesis
Ptc2401_RS05185	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Ptc2401_RS05255	PWY-5686	UMP biosynthesis
Ptc2401_RS05285	PWY-1042	glycolysis IV (plant cytosol)
Ptc2401_RS05285	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ptc2401_RS05285	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ptc2401_RS05285	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ptc2401_RS05285	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ptc2401_RS05295	PWY-4983	L-citrulline-nitric oxide cycle
Ptc2401_RS05295	PWY-4984	urea cycle
Ptc2401_RS05295	PWY-5	canavanine biosynthesis
Ptc2401_RS05295	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ptc2401_RS05295	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ptc2401_RS05325	PWY-4983	L-citrulline-nitric oxide cycle
Ptc2401_RS05325	PWY-4984	urea cycle
Ptc2401_RS05325	PWY-5	canavanine biosynthesis
Ptc2401_RS05325	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ptc2401_RS05325	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ptc2401_RS05335	PWY-4981	L-proline biosynthesis II (from arginine)
Ptc2401_RS05335	PWY-4984	urea cycle
Ptc2401_RS05335	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ptc2401_RS05340	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ptc2401_RS05340	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ptc2401_RS05345	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ptc2401_RS05350	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ptc2401_RS05350	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ptc2401_RS05410	PWY-5172	acetyl-CoA biosynthesis III (from citrate)
Ptc2401_RS05410	PWY-5392	reductive TCA cycle II
Ptc2401_RS05410	PWY-5537	pyruvate fermentation to acetate V
Ptc2401_RS05410	PWY-5538	pyruvate fermentation to acetate VI
Ptc2401_RS05410	PWY-5690	TCA cycle II (plants and fungi)
Ptc2401_RS05410	PWY-5913	TCA cycle VI (obligate autotrophs)
Ptc2401_RS05410	PWY-6728	methylaspartate cycle
Ptc2401_RS05410	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ptc2401_RS05410	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ptc2401_RS05415	PWY-5392	reductive TCA cycle II
Ptc2401_RS05415	PWY-5537	pyruvate fermentation to acetate V
Ptc2401_RS05415	PWY-5538	pyruvate fermentation to acetate VI
Ptc2401_RS05415	PWY-5690	TCA cycle II (plants and fungi)
Ptc2401_RS05415	PWY-5913	TCA cycle VI (obligate autotrophs)
Ptc2401_RS05415	PWY-6728	methylaspartate cycle
Ptc2401_RS05415	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ptc2401_RS05415	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ptc2401_RS05465	PWY-6936	seleno-amino acid biosynthesis
Ptc2401_RS05465	PWY-7274	D-cycloserine biosynthesis
Ptc2401_RS05480	PWY-6936	seleno-amino acid biosynthesis
Ptc2401_RS05480	PWY-7274	D-cycloserine biosynthesis
Ptc2401_RS05550	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Ptc2401_RS05550	PWY-622	starch biosynthesis
Ptc2401_RS05570	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Ptc2401_RS05570	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Ptc2401_RS05600	PWY-6897	thiamin salvage II
Ptc2401_RS05600	PWY-7356	thiamin salvage IV (yeast)
Ptc2401_RS05600	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Ptc2401_RS05775	PWY-2201	folate transformations I
Ptc2401_RS05785	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS05805	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ptc2401_RS05805	PWY-6416	quinate degradation II
Ptc2401_RS05805	PWY-6707	gallate biosynthesis
Ptc2401_RS05835	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Ptc2401_RS05835	PWY-2201	folate transformations I
Ptc2401_RS05835	PWY-3841	folate transformations II
Ptc2401_RS05835	PWY-5030	L-histidine degradation III
Ptc2401_RS05835	PWY-5497	purine nucleobases degradation II (anaerobic)
Ptc2401_RS05835	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Ptc2401_RS05910	PWY-6854	ethylene biosynthesis III (microbes)
Ptc2401_RS06050	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Ptc2401_RS06050	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ptc2401_RS06050	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ptc2401_RS06060	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Ptc2401_RS06060	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ptc2401_RS06060	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ptc2401_RS06065	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Ptc2401_RS06065	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ptc2401_RS06065	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ptc2401_RS06090	PWY-5443	aminopropanol phosphate biosynthesis I
Ptc2401_RS06135	PWY-5194	siroheme biosynthesis
Ptc2401_RS06135	PWY-5441	S-methyl-L-methionine cycle
Ptc2401_RS06135	PWY-702	L-methionine biosynthesis II
Ptc2401_RS06135	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ptc2401_RS06140	PWY-2201	folate transformations I
Ptc2401_RS06140	PWY-3841	folate transformations II
Ptc2401_RS06140	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ptc2401_RS06145	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ptc2401_RS06155	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ptc2401_RS06160	PWY-5194	siroheme biosynthesis
Ptc2401_RS06160	PWY-5441	S-methyl-L-methionine cycle
Ptc2401_RS06160	PWY-702	L-methionine biosynthesis II
Ptc2401_RS06160	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ptc2401_RS06180	PWY-6123	inosine-5'-phosphate biosynthesis I
Ptc2401_RS06180	PWY-6124	inosine-5'-phosphate biosynthesis II
Ptc2401_RS06180	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS06180	PWY-7234	inosine-5'-phosphate biosynthesis III
Ptc2401_RS06230	PWY-3801	sucrose degradation II (sucrose synthase)
Ptc2401_RS06230	PWY-5054	sorbitol biosynthesis I
Ptc2401_RS06230	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Ptc2401_RS06230	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Ptc2401_RS06230	PWY-5659	GDP-mannose biosynthesis
Ptc2401_RS06230	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ptc2401_RS06230	PWY-621	sucrose degradation III (sucrose invertase)
Ptc2401_RS06230	PWY-622	starch biosynthesis
Ptc2401_RS06230	PWY-6981	chitin biosynthesis
Ptc2401_RS06230	PWY-6992	1,5-anhydrofructose degradation
Ptc2401_RS06230	PWY-7238	sucrose biosynthesis II
Ptc2401_RS06230	PWY-7347	sucrose biosynthesis III
Ptc2401_RS06230	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ptc2401_RS06265	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ptc2401_RS06265	PWY-6164	3-dehydroquinate biosynthesis I
Ptc2401_RS06265	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
Ptc2401_RS06310	PWY-2781	<i>cis</i>-zeatin biosynthesis
Ptc2401_RS06395	PWY-5506	methanol oxidation to formaldehyde IV
Ptc2401_RS06415	PWY-1341	phenylacetate degradation II (anaerobic)
Ptc2401_RS06415	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Ptc2401_RS06415	PWY-7716	Ptc2401_RS06415
Ptc2401_RS06590	PWY-6749	CMP-legionaminate biosynthesis I
Ptc2401_RS06655	PWY-6749	CMP-legionaminate biosynthesis I
Ptc2401_RS06660	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Ptc2401_RS06675	PWY-6986	alginate degradation
Ptc2401_RS06675	PWY-7651	heparan sulfate degradation
Ptc2401_RS06825	PWY-5663	tetrahydrobiopterin biosynthesis I
Ptc2401_RS06825	PWY-5664	tetrahydrobiopterin biosynthesis II
Ptc2401_RS06825	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ptc2401_RS06825	PWY-6703	preQ<sub>0</sub> biosynthesis
Ptc2401_RS06825	PWY-6983	tetrahydrobiopterin biosynthesis III
Ptc2401_RS06825	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Ptc2401_RS06940	PWY-6167	flavin biosynthesis II (archaea)
Ptc2401_RS06940	PWY-6168	flavin biosynthesis III (fungi)
Ptc2401_RS06940	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS06955	PWY-5525	D-glucuronate degradation I
Ptc2401_RS06960	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ptc2401_RS07105	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Ptc2401_RS07105	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Ptc2401_RS07110	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Ptc2401_RS07485	PWY-3781	aerobic respiration I (cytochrome c)
Ptc2401_RS07485	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Ptc2401_RS07485	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ptc2401_RS07485	PWY-5690	TCA cycle II (plants and fungi)
Ptc2401_RS07485	PWY-6728	methylaspartate cycle
Ptc2401_RS07485	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ptc2401_RS07485	PWY-7254	TCA cycle VII (acetate-producers)
Ptc2401_RS07485	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ptc2401_RS07575	PWY-5101	L-isoleucine biosynthesis II
Ptc2401_RS07575	PWY-5103	L-isoleucine biosynthesis III
Ptc2401_RS07575	PWY-5104	L-isoleucine biosynthesis IV
Ptc2401_RS07575	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ptc2401_RS07580	PWY-5101	L-isoleucine biosynthesis II
Ptc2401_RS07580	PWY-5103	L-isoleucine biosynthesis III
Ptc2401_RS07580	PWY-5104	L-isoleucine biosynthesis IV
Ptc2401_RS07580	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Ptc2401_RS07580	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Ptc2401_RS07580	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Ptc2401_RS07580	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ptc2401_RS07585	PWY-5101	L-isoleucine biosynthesis II
Ptc2401_RS07585	PWY-5103	L-isoleucine biosynthesis III
Ptc2401_RS07585	PWY-5104	L-isoleucine biosynthesis IV
Ptc2401_RS07585	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Ptc2401_RS07585	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Ptc2401_RS07585	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Ptc2401_RS07585	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ptc2401_RS07590	PWY-5103	L-isoleucine biosynthesis III
Ptc2401_RS07590	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ptc2401_RS07595	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Ptc2401_RS07600	PWY-6871	3-methylbutanol biosynthesis
Ptc2401_RS07615	PWY-5101	L-isoleucine biosynthesis II
Ptc2401_RS07615	PWY-6871	3-methylbutanol biosynthesis
Ptc2401_RS07640	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Ptc2401_RS07645	PWY-5344	L-homocysteine biosynthesis
Ptc2401_RS07650	PWY-5344	L-homocysteine biosynthesis
Ptc2401_RS07650	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Ptc2401_RS07655	PWY-6825	phosphatidylcholine biosynthesis V
Ptc2401_RS07690	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
Ptc2401_RS07700	PWY-7294	xylose degradation IV
Ptc2401_RS07700	PWY-7295	L-arabinose degradation IV
Ptc2401_RS07710	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ptc2401_RS07710	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ptc2401_RS07710	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ptc2401_RS07710	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ptc2401_RS07710	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ptc2401_RS07710	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ptc2401_RS07710	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ptc2401_RS07710	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS07715	PWY-5316	nicotine biosynthesis
Ptc2401_RS07715	PWY-7342	superpathway of nicotine biosynthesis
Ptc2401_RS07760	PWY-40	putrescine biosynthesis I
Ptc2401_RS07760	PWY-43	putrescine biosynthesis II
Ptc2401_RS07760	PWY-6305	putrescine biosynthesis IV
Ptc2401_RS07760	PWY-6834	spermidine biosynthesis III
Ptc2401_RS07770	PWY-5316	nicotine biosynthesis
Ptc2401_RS07770	PWY-7342	superpathway of nicotine biosynthesis
Ptc2401_RS07790	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ptc2401_RS07790	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ptc2401_RS07825	PWY-5747	2-methylcitrate cycle II
Ptc2401_RS07830	PWY-6700	queuosine biosynthesis
Ptc2401_RS07905	PWY-6703	preQ<sub>0</sub> biosynthesis
Ptc2401_RS08365	PWY-1622	formaldehyde assimilation I (serine pathway)
Ptc2401_RS08365	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ptc2401_RS08370	PWY-723	alkylnitronates degradation
Ptc2401_RS08385	PWY-5392	reductive TCA cycle II
Ptc2401_RS08385	PWY-5537	pyruvate fermentation to acetate V
Ptc2401_RS08385	PWY-5538	pyruvate fermentation to acetate VI
Ptc2401_RS08385	PWY-5690	TCA cycle II (plants and fungi)
Ptc2401_RS08385	PWY-5913	TCA cycle VI (obligate autotrophs)
Ptc2401_RS08385	PWY-6728	methylaspartate cycle
Ptc2401_RS08385	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ptc2401_RS08385	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ptc2401_RS08405	PWY-6123	inosine-5'-phosphate biosynthesis I
Ptc2401_RS08405	PWY-7234	inosine-5'-phosphate biosynthesis III
Ptc2401_RS08480	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ptc2401_RS08490	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ptc2401_RS08540	PWY-6871	3-methylbutanol biosynthesis
Ptc2401_RS08565	PWY-6823	molybdenum cofactor biosynthesis
Ptc2401_RS08640	PWY-5686	UMP biosynthesis
Ptc2401_RS08680	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ptc2401_RS08705	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ptc2401_RS08715	PWY-4202	arsenate detoxification I (glutaredoxin)
Ptc2401_RS08715	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Ptc2401_RS08715	PWY-6608	guanosine nucleotides degradation III
Ptc2401_RS08715	PWY-6609	adenine and adenosine salvage III
Ptc2401_RS08715	PWY-6611	adenine and adenosine salvage V
Ptc2401_RS08715	PWY-6620	guanine and guanosine salvage
Ptc2401_RS08715	PWY-6627	salinosporamide A biosynthesis
Ptc2401_RS08715	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Ptc2401_RS08715	PWY-7179	purine deoxyribonucleosides degradation I
Ptc2401_RS08715	PWY-7179-1	purine deoxyribonucleosides degradation
Ptc2401_RS08720	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Ptc2401_RS08720	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Ptc2401_RS08750	PWY-2201	folate transformations I
Ptc2401_RS08750	PWY-5497	purine nucleobases degradation II (anaerobic)
Ptc2401_RS08785	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ptc2401_RS08795	PWY-6700	queuosine biosynthesis
Ptc2401_RS08800	PWY-6123	inosine-5'-phosphate biosynthesis I
Ptc2401_RS08800	PWY-6124	inosine-5'-phosphate biosynthesis II
Ptc2401_RS08800	PWY-7234	inosine-5'-phosphate biosynthesis III
Ptc2401_RS08805	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ptc2401_RS08805	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Ptc2401_RS08810	PWY-6703	preQ<sub>0</sub> biosynthesis
Ptc2401_RS08840	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Ptc2401_RS08840	PWY-6549	L-glutamine biosynthesis III
Ptc2401_RS08840	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Ptc2401_RS08840	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Ptc2401_RS08880	PWY-4702	phytate degradation I
Ptc2401_RS08945	PWY-3221	dTDP-L-rhamnose biosynthesis II
Ptc2401_RS08945	PWY-6808	dTDP-D-forosamine biosynthesis
Ptc2401_RS08945	PWY-6942	dTDP-D-desosamine biosynthesis
Ptc2401_RS08945	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Ptc2401_RS08945	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Ptc2401_RS08945	PWY-6974	dTDP-L-olivose biosynthesis
Ptc2401_RS08945	PWY-6976	dTDP-L-mycarose biosynthesis
Ptc2401_RS08945	PWY-7104	dTDP-L-megosamine biosynthesis
Ptc2401_RS08945	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Ptc2401_RS08945	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Ptc2401_RS08945	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Ptc2401_RS08945	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Ptc2401_RS08945	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Ptc2401_RS08945	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Ptc2401_RS08945	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Ptc2401_RS08945	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Ptc2401_RS08945	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
Ptc2401_RS08945	PWY-7688	Ptc2401_RS08945
Ptc2401_RS08960	PWY-3221	dTDP-L-rhamnose biosynthesis II
Ptc2401_RS08960	PWY-6808	dTDP-D-forosamine biosynthesis
Ptc2401_RS08960	PWY-6942	dTDP-D-desosamine biosynthesis
Ptc2401_RS08960	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Ptc2401_RS08960	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Ptc2401_RS08960	PWY-6974	dTDP-L-olivose biosynthesis
Ptc2401_RS08960	PWY-6976	dTDP-L-mycarose biosynthesis
Ptc2401_RS08960	PWY-7104	dTDP-L-megosamine biosynthesis
Ptc2401_RS08960	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Ptc2401_RS08960	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Ptc2401_RS08960	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Ptc2401_RS08960	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Ptc2401_RS08960	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Ptc2401_RS08960	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Ptc2401_RS08960	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Ptc2401_RS08960	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Ptc2401_RS08960	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
Ptc2401_RS08960	PWY-7688	Ptc2401_RS08960
Ptc2401_RS08965	PWY-5659	GDP-mannose biosynthesis
Ptc2401_RS08965	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Ptc2401_RS08990	PWY-101	photosynthesis light reactions
Ptc2401_RS09005	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ptc2401_RS09035	PWY-6605	adenine and adenosine salvage II
Ptc2401_RS09035	PWY-6610	adenine and adenosine salvage IV
Ptc2401_RS09065	PWY-7205	CMP phosphorylation
Ptc2401_RS09075	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ptc2401_RS09075	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ptc2401_RS09090	PWY-5532	adenosine nucleotides degradation IV
Ptc2401_RS09090	PWY-5723	Rubisco shunt
Ptc2401_RS09245	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Ptc2401_RS09245	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Ptc2401_RS09245	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ptc2401_RS09245	PWY-6936	seleno-amino acid biosynthesis
Ptc2401_RS09245	PWY-702	L-methionine biosynthesis II
Ptc2401_RS09250	PWY-4381	fatty acid biosynthesis initiation I
Ptc2401_RS09250	PWY-5743	3-hydroxypropanoate cycle
Ptc2401_RS09250	PWY-5744	glyoxylate assimilation
Ptc2401_RS09250	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ptc2401_RS09250	PWY-6679	jadomycin biosynthesis
Ptc2401_RS09250	PWY-6722	candicidin biosynthesis
Ptc2401_RS09250	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ptc2401_RS09260	PWY-5381	pyridine nucleotide cycling (plants)
Ptc2401_RS09260	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Ptc2401_RS09260	PWY-6596	adenosine nucleotides degradation I
Ptc2401_RS09260	PWY-6606	guanosine nucleotides degradation II
Ptc2401_RS09260	PWY-6607	guanosine nucleotides degradation I
Ptc2401_RS09260	PWY-6608	guanosine nucleotides degradation III
Ptc2401_RS09260	PWY-7185	UTP and CTP dephosphorylation I
Ptc2401_RS09300	PWY-5958	acridone alkaloid biosynthesis
Ptc2401_RS09300	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Ptc2401_RS09300	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Ptc2401_RS09360	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
Ptc2401_RS09375	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ptc2401_RS09425	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Ptc2401_RS09425	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Ptc2401_RS09425	PWY-6406	salicylate biosynthesis I
Ptc2401_RS09430	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Ptc2401_RS09435	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Ptc2401_RS09440	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Ptc2401_RS09445	PWY-1042	glycolysis IV (plant cytosol)
Ptc2401_RS09445	PWY-1622	formaldehyde assimilation I (serine pathway)
Ptc2401_RS09445	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Ptc2401_RS09445	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ptc2401_RS09445	PWY-5723	Rubisco shunt
Ptc2401_RS09445	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Ptc2401_RS09445	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ptc2401_RS09445	PWY-6886	1-butanol autotrophic biosynthesis
Ptc2401_RS09445	PWY-6901	superpathway of glucose and xylose degradation
Ptc2401_RS09445	PWY-7003	glycerol degradation to butanol
Ptc2401_RS09445	PWY-7124	ethylene biosynthesis V (engineered)
Ptc2401_RS09445	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Ptc2401_RS09450	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Ptc2401_RS09460	PWY-2941	L-lysine biosynthesis II
Ptc2401_RS09460	PWY-2942	L-lysine biosynthesis III
Ptc2401_RS09460	PWY-5097	L-lysine biosynthesis VI
Ptc2401_RS09500	PWY-2201	folate transformations I
Ptc2401_RS09500	PWY-3841	folate transformations II
Ptc2401_RS09525	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ptc2401_RS09525	PWY-5723	Rubisco shunt
Ptc2401_RS09525	PWY-6891	thiazole biosynthesis II (Bacillus)
Ptc2401_RS09525	PWY-6892	thiazole biosynthesis I (E. coli)
Ptc2401_RS09525	PWY-6901	superpathway of glucose and xylose degradation
Ptc2401_RS09525	PWY-7560	methylerythritol phosphate pathway II
Ptc2401_RS09530	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Ptc2401_RS09530	PWY-6855	chitin degradation I (archaea)
Ptc2401_RS09530	PWY-6906	chitin derivatives degradation
Ptc2401_RS09535	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Ptc2401_RS09695	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ptc2401_RS09715	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ptc2401_RS09730	PWY-2941	L-lysine biosynthesis II
Ptc2401_RS09730	PWY-2942	L-lysine biosynthesis III
Ptc2401_RS09730	PWY-5097	L-lysine biosynthesis VI
Ptc2401_RS09730	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ptc2401_RS09730	PWY-6559	spermidine biosynthesis II
Ptc2401_RS09730	PWY-6562	norspermidine biosynthesis
Ptc2401_RS09730	PWY-7153	grixazone biosynthesis
Ptc2401_RS09730	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ptc2401_RS09760	PWY-5316	nicotine biosynthesis
Ptc2401_RS09760	PWY-5381	pyridine nucleotide cycling (plants)
Ptc2401_RS09760	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Ptc2401_RS09760	PWY-7342	superpathway of nicotine biosynthesis
Ptc2401_RS09765	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ptc2401_RS09765	PWY-6148	tetrahydromethanopterin biosynthesis
Ptc2401_RS09765	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Ptc2401_RS09765	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Ptc2401_RS09770	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ptc2401_RS09770	PWY-6148	tetrahydromethanopterin biosynthesis
Ptc2401_RS09770	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Ptc2401_RS09770	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Ptc2401_RS09830	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ptc2401_RS09830	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ptc2401_RS09840	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ptc2401_RS09840	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ptc2401_RS09845	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ptc2401_RS09845	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ptc2401_RS09920	PWY-6823	molybdenum cofactor biosynthesis
Ptc2401_RS09920	PWY-6891	thiazole biosynthesis II (Bacillus)
Ptc2401_RS09920	PWY-6892	thiazole biosynthesis I (E. coli)
Ptc2401_RS09920	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Ptc2401_RS09925	PWY-6936	seleno-amino acid biosynthesis
Ptc2401_RS09940	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ptc2401_RS09940	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Ptc2401_RS09940	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ptc2401_RS09940	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ptc2401_RS09940	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Ptc2401_RS09940	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ptc2401_RS09940	PWY-7205	CMP phosphorylation
Ptc2401_RS09940	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ptc2401_RS09940	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ptc2401_RS09940	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS09940	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ptc2401_RS09940	PWY-7224	purine deoxyribonucleosides salvage
Ptc2401_RS09940	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ptc2401_RS09940	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS09955	PWY-2201	folate transformations I
Ptc2401_RS09990	PWY-622	starch biosynthesis
Ptc2401_RS10010	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ptc2401_RS10010	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ptc2401_RS10015	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ptc2401_RS10015	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ptc2401_RS10020	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ptc2401_RS10020	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ptc2401_RS10030	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ptc2401_RS10325	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
Ptc2401_RS10325	PWY-5368	dimorphecolate biosynthesis
Ptc2401_RS10325	PWY-5995	linoleate biosynthesis I (plants)
Ptc2401_RS10325	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
Ptc2401_RS10325	PWY-6803	phosphatidylcholine acyl editing
Ptc2401_RS10325	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
Ptc2401_RS10325	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Ptc2401_RS10325	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Ptc2401_RS10325	PWY-7470	phosphatidylcholine biosynthesis VII
Ptc2401_RS10325	PWY-7618	ricinoleate biosynthesis
Ptc2401_RS10335	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ptc2401_RS10335	PWY-5686	UMP biosynthesis
Ptc2401_RS10335	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ptc2401_RS10340	PWY-6832	2-aminoethylphosphonate degradation II
Ptc2401_RS10365	PWY-3341	L-proline biosynthesis III
Ptc2401_RS10365	PWY-4981	L-proline biosynthesis II (from arginine)
Ptc2401_RS10365	PWY-6344	L-ornithine degradation II (Stickland reaction)
Ptc2401_RS10380	PWY-6823	molybdenum cofactor biosynthesis
Ptc2401_RS10390	PWY-6823	molybdenum cofactor biosynthesis
Ptc2401_RS10400	PWY-6823	molybdenum cofactor biosynthesis
Ptc2401_RS10420	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Ptc2401_RS10420	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
Ptc2401_RS10495	PWY-5674	nitrate reduction IV (dissimilatory)
Ptc2401_RS10510	PWY-5686	UMP biosynthesis
Ptc2401_RS10515	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Ptc2401_RS10520	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Ptc2401_RS10520	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Ptc2401_RS10520	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Ptc2401_RS10530	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ptc2401_RS10530	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
Ptc2401_RS10555	PWY-5667	CDP-diacylglycerol biosynthesis I
Ptc2401_RS10555	PWY-5981	CDP-diacylglycerol biosynthesis III
Ptc2401_RS10565	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ptc2401_RS10565	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ptc2401_RS10565	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ptc2401_RS10570	PWY-2941	L-lysine biosynthesis II
Ptc2401_RS10570	PWY-2942	L-lysine biosynthesis III
Ptc2401_RS10570	PWY-5097	L-lysine biosynthesis VI
Ptc2401_RS10570	PWY-6559	spermidine biosynthesis II
Ptc2401_RS10570	PWY-6562	norspermidine biosynthesis
Ptc2401_RS10570	PWY-7153	grixazone biosynthesis
Ptc2401_RS10640	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Ptc2401_RS10645	PWY-2201	folate transformations I
Ptc2401_RS10645	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ptc2401_RS10660	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Ptc2401_RS10785	PWY-5381	pyridine nucleotide cycling (plants)
Ptc2401_RS10785	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Ptc2401_RS10905	PWY-3821	galactose degradation III
Ptc2401_RS10905	PWY-6317	galactose degradation I (Leloir pathway)
Ptc2401_RS10905	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Ptc2401_RS10905	PWY-6527	stachyose degradation
Ptc2401_RS10905	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Ptc2401_RS10905	PWY-7344	UDP-D-galactose biosynthesis
Ptc2401_RS10930	PWY-3781	aerobic respiration I (cytochrome c)
Ptc2401_RS10930	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Ptc2401_RS10930	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ptc2401_RS10930	PWY-5690	TCA cycle II (plants and fungi)
Ptc2401_RS10930	PWY-6728	methylaspartate cycle
Ptc2401_RS10930	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ptc2401_RS10930	PWY-7254	TCA cycle VII (acetate-producers)
Ptc2401_RS10930	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ptc2401_RS10960	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ptc2401_RS10960	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ptc2401_RS10965	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ptc2401_RS10965	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ptc2401_RS10970	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ptc2401_RS10970	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Ptc2401_RS10970	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ptc2401_RS10970	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ptc2401_RS10980	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ptc2401_RS10980	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ptc2401_RS10985	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ptc2401_RS10985	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ptc2401_RS10985	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ptc2401_RS10990	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ptc2401_RS10990	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ptc2401_RS11010	PWY-2201	folate transformations I
Ptc2401_RS11025	PWY-3461	L-tyrosine biosynthesis II
Ptc2401_RS11025	PWY-3462	L-phenylalanine biosynthesis II
Ptc2401_RS11025	PWY-6120	L-tyrosine biosynthesis III
Ptc2401_RS11025	PWY-6627	salinosporamide A biosynthesis
Ptc2401_RS11025	PWY-7626	bacilysin biosynthesis
Ptc2401_RS11035	PWY-1042	glycolysis IV (plant cytosol)
Ptc2401_RS11035	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ptc2401_RS11035	PWY-6886	1-butanol autotrophic biosynthesis
Ptc2401_RS11035	PWY-6901	superpathway of glucose and xylose degradation
Ptc2401_RS11035	PWY-7003	glycerol degradation to butanol
