locus-tag class description AM356_RS00005 PF00549 CoA-ligase AM356_RS00005 PF02629 CoA binding domain AM356_RS00010 PF06545 Protein of unknown function (DUF1116) AM356_RS00015 PF11392 Protein of unknown function (DUF2877) AM356_RS00020 PF00696 Amino acid kinase family AM356_RS00030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS00030 PF03466 LysR substrate binding domain AM356_RS00055 PF00072 Response regulator receiver domain AM356_RS00055 PF00196 Bacterial regulatory proteins, luxR family AM356_RS00060 PF00356 Bacterial regulatory proteins, lacI family AM356_RS00060 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM356_RS00065 PF00251 Glycosyl hydrolases family 32 N-terminal domain AM356_RS00065 PF08244 Glycosyl hydrolases family 32 C terminal AM356_RS00070 PF00294 pfkB family carbohydrate kinase AM356_RS00075 PF00892 EamA-like transporter family AM356_RS00080 PF02222 ATP-grasp domain AM356_RS00085 PF00183 Hsp90 protein AM356_RS00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS00090 PF05191 Adenylate kinase, active site lid AM356_RS00095 PF00762 Ferrochelatase AM356_RS00100 PF02706 Chain length determinant protein AM356_RS00105 PF00294 pfkB family carbohydrate kinase AM356_RS00110 PF00999 Sodium/hydrogen exchanger family AM356_RS00110 PF02254 TrkA-N domain AM356_RS00115 PF00149 Calcineurin-like phosphoesterase AM356_RS00115 PF02872 5'-nucleotidase, C-terminal domain AM356_RS00120 PF04073 Aminoacyl-tRNA editing domain AM356_RS00125 PF01963 TraB family AM356_RS00135 PF00403 Heavy-metal-associated domain AM356_RS00140 PF13411 MerR HTH family regulatory protein AM356_RS00150 PF01145 SPFH domain / Band 7 family AM356_RS00150 PF16200 C-terminal region of band_7 AM356_RS00155 PF00085 Thioredoxin AM356_RS00160 PF00106 short chain dehydrogenase AM356_RS00165 PF13472 GDSL-like Lipase/Acylhydrolase family AM356_RS00170 PF00005 ABC transporter AM356_RS00180 PF00924 Mechanosensitive ion channel AM356_RS00190 PF02222 ATP-grasp domain AM356_RS00190 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM356_RS00195 PF00731 AIR carboxylase AM356_RS00200 PF00149 Calcineurin-like phosphoesterase AM356_RS00205 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM356_RS00210 PF01406 tRNA synthetases class I (C) catalytic domain AM356_RS00210 PF09190 DALR domain AM356_RS00215 PF00294 pfkB family carbohydrate kinase AM356_RS00225 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM356_RS00225 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM356_RS00240 PF04229 GrpB protein AM356_RS00250 PF01022 Bacterial regulatory protein, arsR family AM356_RS00255 PF02040 Arsenical pump membrane protein AM356_RS00260 PF02567 Phenazine biosynthesis-like protein AM356_RS00270 PF01266 FAD dependent oxidoreductase AM356_RS00280 PF01081 KDPG and KHG aldolase AM356_RS00285 PF00294 pfkB family carbohydrate kinase AM356_RS00290 PF01116 Fructose-bisphosphate aldolase class-II AM356_RS00300 PF00884 Sulfatase AM356_RS00305 PF13186 Iron-sulfur cluster-binding domain AM356_RS00305 PF04055 Radical SAM superfamily AM356_RS00310 PF00455 DeoR C terminal sensor domain AM356_RS00310 PF08220 DeoR-like helix-turn-helix domain AM356_RS00315 PF08013 Tagatose 6 phosphate kinase AM356_RS00320 PF01380 SIS domain AM356_RS00325 PF03830 PTS system sorbose subfamily IIB component AM356_RS00330 PF03609 PTS system sorbose-specific iic component AM356_RS00335 PF03613 PTS system mannose/fructose/sorbose family IID component AM356_RS00340 PF03830 PTS system sorbose subfamily IIB component AM356_RS00340 PF03610 PTS system fructose IIA component AM356_RS00345 PF01979 Amidohydrolase family AM356_RS00350 PF04962 KduI/IolB family AM356_RS00360 PF07470 Glycosyl Hydrolase Family 88 AM356_RS00375 PF02278 Polysaccharide lyase family 8, super-sandwich domain AM356_RS00375 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain AM356_RS00375 PF09093 Lyase, catalytic AM356_RS00375 PF09092 Lyase, N terminal AM356_RS00380 PF09093 Lyase, catalytic AM356_RS00380 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain AM356_RS00380 PF02278 Polysaccharide lyase family 8, super-sandwich domain AM356_RS00380 PF09092 Lyase, N terminal AM356_RS00395 PF00884 Sulfatase AM356_RS00405 PF05662 Coiled stalk of trimeric autotransporter adhesin AM356_RS00405 PF03895 YadA-like membrane anchor domain AM356_RS00405 PF05658 Head domain of trimeric autotransporter adhesin AM356_RS00405 PF13018 Extended Signal Peptide of Type V secretion system AM356_RS00420 PF01292 Prokaryotic cytochrome b561 AM356_RS00425 PF04264 YceI-like domain AM356_RS00430 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AM356_RS00435 PF02254 TrkA-N domain AM356_RS00435 PF07885 Ion channel AM356_RS00440 PF03848 Tellurite resistance protein TehB AM356_RS00440 PF09313 Domain of unknown function (DUF1971) AM356_RS00445 PF00654 Voltage gated chloride channel AM356_RS00450 PF01235 Sodium:alanine symporter family AM356_RS00455 PF00171 Aldehyde dehydrogenase family AM356_RS00460 PF03063 Prismane/CO dehydrogenase family AM356_RS00465 PF00970 Oxidoreductase FAD-binding domain AM356_RS00465 PF00111 2Fe-2S iron-sulfur cluster binding domain AM356_RS00465 PF00175 Oxidoreductase NAD-binding domain AM356_RS00475 PF03448 MgtE intracellular N domain AM356_RS00475 PF01769 Divalent cation transporter AM356_RS00475 PF00571 CBS domain AM356_RS00480 PF10263 SprT-like family AM356_RS00480 PF17283 SprT-like zinc ribbon domain AM356_RS00490 PF04143 Sulphur transport AM356_RS00500 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AM356_RS00505 PF03170 Bacterial cellulose synthase subunit AM356_RS00510 PF07238 PilZ domain AM356_RS00510 PF00535 Glycosyl transferase family 2 AM356_RS00515 PF06564 Cellulose biosynthesis protein BcsQ AM356_RS00525 PF11658 Cellulose biosynthesis protein BcsG AM356_RS00530 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM356_RS00530 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM356_RS00530 PF02772 S-adenosylmethionine synthetase, central domain AM356_RS00535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM356_RS00535 PF17810 Arginine decarboxylase helical bundle domain AM356_RS00535 PF17944 Arginine decarboxylase C-terminal helical extension AM356_RS00540 PF00491 Arginase family AM356_RS00545 PF00106 short chain dehydrogenase AM356_RS00550 PF05973 Phage derived protein Gp49-like (DUF891) AM356_RS00560 PF02976 DNA mismatch repair enzyme MutH AM356_RS00565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM356_RS00565 PF12793 Sugar transport-related sRNA regulator N-term AM356_RS00570 PF00694 Aconitase C-terminal domain AM356_RS00575 PF00330 Aconitase family (aconitate hydratase) AM356_RS00580 PF00180 Isocitrate/isopropylmalate dehydrogenase AM356_RS00585 PF00682 HMGL-like AM356_RS00585 PF08502 LeuA allosteric (dimerisation) domain AM356_RS00595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS00595 PF03466 LysR substrate binding domain AM356_RS00600 PF00501 AMP-binding enzyme AM356_RS00605 PF00356 Bacterial regulatory proteins, lacI family AM356_RS00605 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM356_RS00610 PF02381 MraZ protein, putative antitoxin-like AM356_RS00615 PF01795 MraW methylase family AM356_RS00620 PF04999 Cell division protein FtsL AM356_RS00625 PF03717 Penicillin-binding Protein dimerisation domain AM356_RS00625 PF00905 Penicillin binding protein transpeptidase domain AM356_RS00630 PF01225 Mur ligase family, catalytic domain AM356_RS00630 PF02875 Mur ligase family, glutamate ligase domain AM356_RS00630 PF08245 Mur ligase middle domain AM356_RS00635 PF01225 Mur ligase family, catalytic domain AM356_RS00635 PF02875 Mur ligase family, glutamate ligase domain AM356_RS00635 PF08245 Mur ligase middle domain AM356_RS00640 PF00953 Glycosyl transferase family 4 AM356_RS00640 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM356_RS00645 PF02875 Mur ligase family, glutamate ligase domain AM356_RS00645 PF08245 Mur ligase middle domain AM356_RS00650 PF01098 Cell cycle protein AM356_RS00655 PF04101 Glycosyltransferase family 28 C-terminal domain AM356_RS00655 PF03033 Glycosyltransferase family 28 N-terminal domain AM356_RS00660 PF08245 Mur ligase middle domain AM356_RS00660 PF01225 Mur ligase family, catalytic domain AM356_RS00660 PF02875 Mur ligase family, glutamate ligase domain AM356_RS00670 PF08478 POTRA domain, FtsQ-type AM356_RS00670 PF03799 Cell division protein FtsQ AM356_RS00675 PF02491 SHS2 domain inserted in FTSA AM356_RS00680 PF00091 Tubulin/FtsZ family, GTPase domain AM356_RS00680 PF12327 FtsZ family, C-terminal domain AM356_RS00685 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM356_RS00695 PF06558 Secretion monitor precursor protein (SecM) AM356_RS00700 PF01043 SecA preprotein cross-linking domain AM356_RS00700 PF07516 SecA Wing and Scaffold domain AM356_RS00700 PF07517 SecA DEAD-like domain AM356_RS00700 PF02810 SEC-C motif AM356_RS00705 PF00376 MerR family regulatory protein AM356_RS00705 PF09278 MerR, DNA binding AM356_RS00710 PF00403 Heavy-metal-associated domain AM356_RS00715 PF05860 haemagglutination activity domain AM356_RS00715 PF13332 Hemagglutinin repeat AM356_RS00720 PF08479 POTRA domain, ShlB-type AM356_RS00720 PF17287 POTRA domain AM356_RS00720 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM356_RS00725 PF00293 NUDIX domain AM356_RS00730 PF03884 DNA gyrase inhibitor YacG AM356_RS00735 PF07072 Cell division protein AM356_RS00740 PF01121 Dephospho-CoA kinase AM356_RS00750 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM356_RS00750 PF00437 Type II/IV secretion system protein AM356_RS00755 PF07963 Prokaryotic N-terminal methylation motif AM356_RS00760 PF01510 N-acetylmuramoyl-L-alanine amidase AM356_RS00765 PF07729 FCD domain AM356_RS00765 PF00392 Bacterial regulatory proteins, gntR family AM356_RS00770 PF17831 Pyruvate dehydrogenase E1 component middle domain AM356_RS00770 PF00456 Transketolase, thiamine diphosphate binding domain AM356_RS00775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM356_RS00775 PF00364 Biotin-requiring enzyme AM356_RS00775 PF02817 e3 binding domain AM356_RS00780 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM356_RS00780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM356_RS00795 PF00330 Aconitase family (aconitate hydratase) AM356_RS00795 PF06434 Aconitate hydratase 2 N-terminus AM356_RS00795 PF11791 Aconitate B N-terminal domain AM356_RS00800 PF06062 Uncharacterised protein family (UPF0231) AM356_RS00805 PF00924 Mechanosensitive ion channel AM356_RS00805 PF05552 Conserved TM helix AM356_RS00810 PF01810 LysE type translocator AM356_RS00815 PF04402 Protein of unknown function (DUF541) AM356_RS00830 PF03466 LysR substrate binding domain AM356_RS00830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS00835 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM356_RS00840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM356_RS00840 PF01842 ACT domain AM356_RS00840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM356_RS00845 PF00005 ABC transporter AM356_RS00845 PF03412 Peptidase C39 family AM356_RS00845 PF00664 ABC transporter transmembrane region AM356_RS00855 PF00664 ABC transporter transmembrane region AM356_RS00855 PF00005 ABC transporter AM356_RS00855 PF03412 Peptidase C39 family AM356_RS00860 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM356_RS00870 PF05164 Cell division protein ZapA AM356_RS00875 PF03695 Uncharacterised protein family (UPF0149) AM356_RS00880 PF00557 Metallopeptidase family M24 AM356_RS00880 PF05195 Aminopeptidase P, N-terminal domain AM356_RS00885 PF01494 FAD binding domain AM356_RS00890 PF01494 FAD binding domain AM356_RS00895 PF01571 Aminomethyltransferase folate-binding domain AM356_RS00895 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM356_RS00900 PF01597 Glycine cleavage H-protein AM356_RS00905 PF02347 Glycine cleavage system P-protein AM356_RS00915 PF01571 Aminomethyltransferase folate-binding domain AM356_RS00920 PF03937 Flavinator of succinate dehydrogenase AM356_RS00930 PF07254 Membrane-bound toxin component of toxin-antitoxin system AM356_RS00935 PF00258 Flavodoxin AM356_RS00940 PF00589 Phage integrase family AM356_RS00940 PF02899 Phage integrase, N-terminal SAM-like domain AM356_RS00945 PF13098 Thioredoxin-like domain AM356_RS00945 PF10411 Disulfide bond isomerase protein N-terminus AM356_RS00950 PF02272 DHHA1 domain AM356_RS00950 PF01368 DHH family AM356_RS00950 PF17768 RecJ OB domain AM356_RS00960 PF00152 tRNA synthetases class II (D, K and N) AM356_RS00960 PF01336 OB-fold nucleic acid binding domain AM356_RS00975 PF13505 Outer membrane protein beta-barrel domain AM356_RS01000 PF16970 Type-1 fimbrial protein, A AM356_RS01005 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS01005 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS01010 PF00577 Outer membrane usher protein AM356_RS01010 PF13954 PapC N-terminal domain AM356_RS01010 PF13953 PapC C-terminal domain AM356_RS01020 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS01020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS01035 PF03358 NADPH-dependent FMN reductase AM356_RS01055 PF12833 Helix-turn-helix domain AM356_RS01065 PF13302 Acetyltransferase (GNAT) domain AM356_RS01070 PF11756 Nitrous oxide-stimulated promoter AM356_RS01080 PF10678 Protein of unknown function (DUF2492) AM356_RS01085 PF04325 Protein of unknown function (DUF465) AM356_RS01090 PF03974 Ecotin AM356_RS01095 PF00582 Universal stress protein family AM356_RS01100 PF01545 Cation efflux family AM356_RS01100 PF16916 Dimerisation domain of Zinc Transporter AM356_RS01105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM356_RS01105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM356_RS01110 PF16363 GDP-mannose 4,6 dehydratase AM356_RS01115 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AM356_RS01115 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AM356_RS01120 PF00288 GHMP kinases N terminal domain AM356_RS01120 PF08544 GHMP kinases C terminal AM356_RS01120 PF10509 Galactokinase galactose-binding signature AM356_RS01125 PF01263 Aldose 1-epimerase AM356_RS01130 PF00356 Bacterial regulatory proteins, lacI family AM356_RS01135 PF00474 Sodium:solute symporter family AM356_RS01140 PF00593 TonB dependent receptor AM356_RS01140 PF07715 TonB-dependent Receptor Plug Domain AM356_RS01145 PF00756 Putative esterase AM356_RS01150 PF07690 Major Facilitator Superfamily AM356_RS01155 PF06940 Domain of unknown function (DUF1287) AM356_RS01160 PF03692 Putative zinc- or iron-chelating domain AM356_RS01175 PF02589 LUD domain AM356_RS01180 PF13183 4Fe-4S dicluster domain AM356_RS01180 PF11870 Domain of unknown function (DUF3390) AM356_RS01180 PF02589 LUD domain AM356_RS01185 PF02754 Cysteine-rich domain AM356_RS01190 PF02652 L-lactate permease AM356_RS01195 PF07690 Major Facilitator Superfamily AM356_RS01200 PF02525 Flavodoxin-like fold AM356_RS01215 PF06039 Malate:quinone oxidoreductase (Mqo) AM356_RS01240 PF05860 haemagglutination activity domain AM356_RS01240 PF13332 Hemagglutinin repeat AM356_RS01240 PF04829 Pre-toxin domain with VENN motif AM356_RS01240 PF04829 Pre-toxin domain with VENN motif AM356_RS01240 PF05860 haemagglutination activity domain AM356_RS01240 PF13332 Hemagglutinin repeat AM356_RS01245 PF17287 POTRA domain AM356_RS01245 PF08479 POTRA domain, ShlB-type AM356_RS01245 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM356_RS01280 PF00155 Aminotransferase class I and II AM356_RS01280 PF00392 Bacterial regulatory proteins, gntR family AM356_RS01285 PF00892 EamA-like transporter family AM356_RS01310 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AM356_RS01310 PF18766 SWI2/SNF2 ATPase AM356_RS01310 PF11867 Domain of unknown function (DUF3387) AM356_RS01315 PF07510 Protein of unknown function (DUF1524) AM356_RS01345 PF00293 NUDIX domain AM356_RS01360 PF01668 SmpB protein AM356_RS01365 PF03364 Polyketide cyclase / dehydrase and lipid transport AM356_RS01370 PF03658 RnfH family Ubiquitin AM356_RS01375 PF04355 SmpA / OmlA family AM356_RS01380 PF02463 RecF/RecN/SMC N terminal domain AM356_RS01385 PF01513 ATP-NAD kinase AM356_RS01390 PF01025 GrpE AM356_RS01395 PF03167 Uracil DNA glycosylase superfamily AM356_RS01405 PF01228 Glycine radical AM356_RS01410 PF00270 DEAD/DEAH box helicase AM356_RS01410 PF00271 Helicase conserved C-terminal domain AM356_RS01415 PF05175 Methyltransferase small domain AM356_RS01420 PF04542 Sigma-70 region 2 AM356_RS01420 PF08281 Sigma-70, region 4 AM356_RS01425 PF03872 Anti sigma-E protein RseA, N-terminal domain AM356_RS01425 PF03873 Anti sigma-E protein RseA, C-terminal domain AM356_RS01430 PF03888 MucB/RseB N-terminal domain AM356_RS01430 PF17188 MucB/RseB C-terminal domain AM356_RS01440 PF06421 GTP-binding protein LepA C-terminus AM356_RS01440 PF03144 Elongation factor Tu domain 2 AM356_RS01440 PF00679 Elongation factor G C-terminus AM356_RS01440 PF00009 Elongation factor Tu GTP binding domain AM356_RS01445 PF10502 Signal peptidase, peptidase S26 AM356_RS01450 PF00035 Double-stranded RNA binding motif AM356_RS01450 PF14622 Ribonuclease-III-like AM356_RS01455 PF01926 50S ribosome-binding GTPase AM356_RS01455 PF07650 KH domain AM356_RS01460 PF02565 Recombination protein O C terminal AM356_RS01460 PF11967 Recombination protein O N terminal AM356_RS01465 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM356_RS01470 PF01648 4'-phosphopantetheinyl transferase superfamily AM356_RS01475 PF12838 4Fe-4S dicluster domain AM356_RS01480 PF14437 MafB19-like deaminase AM356_RS01485 PF00419 Fimbrial protein AM356_RS01490 PF00419 Fimbrial protein AM356_RS01495 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS01495 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS01500 PF00577 Outer membrane usher protein AM356_RS01500 PF13953 PapC C-terminal domain AM356_RS01500 PF13954 PapC N-terminal domain AM356_RS01505 PF00419 Fimbrial protein AM356_RS01510 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM356_RS01510 PF01464 Transglycosylase SLT domain AM356_RS01515 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM356_RS01515 PF02769 AIR synthase related protein, C-terminal domain AM356_RS01515 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM356_RS01520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS01520 PF00512 His Kinase A (phospho-acceptor) domain AM356_RS01525 PF13942 YfhG lipoprotein AM356_RS01530 PF00158 Sigma-54 interaction domain AM356_RS01530 PF00072 Response regulator receiver domain AM356_RS01535 PF00795 Carbon-nitrogen hydrolase AM356_RS01535 PF02540 NAD synthase AM356_RS01540 PF00543 Nitrogen regulatory protein P-II AM356_RS01550 PF00042 Globin AM356_RS01550 PF00970 Oxidoreductase FAD-binding domain AM356_RS01550 PF00175 Oxidoreductase NAD-binding domain AM356_RS01555 PF00464 Serine hydroxymethyltransferase AM356_RS01560 PF12832 MFS_1 like family AM356_RS01575 PF00459 Inositol monophosphatase family AM356_RS01580 PF00588 SpoU rRNA Methylase family AM356_RS01585 PF02082 Transcriptional regulator AM356_RS01590 PF00266 Aminotransferase class-V AM356_RS01595 PF01592 NifU-like N terminal domain AM356_RS01600 PF01521 Iron-sulphur cluster biosynthesis AM356_RS01605 PF00226 DnaJ domain AM356_RS01605 PF07743 HSCB C-terminal oligomerisation domain AM356_RS01610 PF00012 Hsp70 protein AM356_RS01615 PF00111 2Fe-2S iron-sulfur cluster binding domain AM356_RS01620 PF04384 Iron-sulphur cluster assembly AM356_RS01625 PF12404 Peptidase AM356_RS01625 PF00883 Cytosol aminopeptidase family, catalytic domain AM356_RS01630 PF07179 SseB protein N-terminal domain AM356_RS01630 PF14581 SseB protein C-terminal domain AM356_RS01635 PF00207 Alpha-2-macroglobulin family AM356_RS01635 PF07678 A-macroglobulin TED domain AM356_RS01635 PF01835 MG2 domain AM356_RS01635 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AM356_RS01635 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AM356_RS01635 PF07703 Alpha-2-macroglobulin bait region domain AM356_RS01635 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AM356_RS01635 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AM356_RS01635 PF17962 Bacterial macroglobulin domain 6 AM356_RS01640 PF06832 Penicillin-Binding Protein C-terminus Family AM356_RS01640 PF00912 Transglycosylase AM356_RS01640 PF00905 Penicillin binding protein transpeptidase domain AM356_RS01645 PF00334 Nucleoside diphosphate kinase AM356_RS01650 PF04055 Radical SAM superfamily AM356_RS01660 PF13464 Domain of unknown function (DUF4115) AM356_RS01665 PF04551 GcpE protein AM356_RS01670 PF13393 Histidyl-tRNA synthetase AM356_RS01670 PF03129 Anticodon binding domain AM356_RS01675 PF09976 Tetratricopeptide repeat-like domain AM356_RS01680 PF13360 PQQ-like domain AM356_RS01685 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM356_RS01685 PF01926 50S ribosome-binding GTPase AM356_RS01695 PF01218 Coproporphyrinogen III oxidase AM356_RS01700 PF00583 Acetyltransferase (GNAT) family AM356_RS01705 PF06572 Protein of unknown function (DUF1131) AM356_RS01710 PF04261 Dyp-type peroxidase family AM356_RS01720 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS01725 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS01730 PF00005 ABC transporter AM356_RS01735 PF00291 Pyridoxal-phosphate dependent enzyme AM356_RS01740 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM356_RS01745 PF05524 PEP-utilising enzyme, N-terminal AM356_RS01745 PF00391 PEP-utilising enzyme, mobile domain AM356_RS01745 PF02896 PEP-utilising enzyme, TIM barrel domain AM356_RS01750 PF00381 PTS HPr component phosphorylation site AM356_RS01755 PF00291 Pyridoxal-phosphate dependent enzyme AM356_RS01765 PF04354 ZipA, C-terminal FtsZ-binding domain AM356_RS01775 PF03120 NAD-dependent DNA ligase OB-fold domain AM356_RS01775 PF01653 NAD-dependent DNA ligase adenylation domain AM356_RS01775 PF00533 BRCA1 C Terminus (BRCT) domain AM356_RS01775 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM356_RS01775 PF12826 Helix-hairpin-helix motif AM356_RS01780 PF01773 Na+ dependent nucleoside transporter N-terminus AM356_RS01780 PF07662 Na+ dependent nucleoside transporter C-terminus AM356_RS01780 PF07670 Nucleoside recognition AM356_RS01785 PF12843 Putative quorum-sensing-regulated virulence factor AM356_RS01810 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM356_RS01860 PF01381 Helix-turn-helix AM356_RS01865 PF01292 Prokaryotic cytochrome b561 AM356_RS01870 PF13247 4Fe-4S dicluster domain AM356_RS01870 PF12800 4Fe-4S binding domain AM356_RS01875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM356_RS01875 PF00384 Molybdopterin oxidoreductase AM356_RS01875 PF01568 Molydopterin dinucleotide binding domain AM356_RS01895 PF04333 MlaA lipoprotein AM356_RS01900 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM356_RS01905 PF04175 Protein of unknown function (DUF406) AM356_RS01910 PF02803 Thiolase, C-terminal domain AM356_RS01910 PF00108 Thiolase, N-terminal domain AM356_RS01915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM356_RS01915 PF00378 Enoyl-CoA hydratase/isomerase AM356_RS01915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM356_RS01920 PF00300 Histidine phosphatase superfamily (branch 1) AM356_RS01925 PF01713 Smr domain AM356_RS01930 PF00210 Ferritin-like domain AM356_RS01935 PF05175 Methyltransferase small domain AM356_RS01940 PF01264 Chorismate synthase AM356_RS01945 PF01925 Sulfite exporter TauE/SafE AM356_RS01950 PF04315 Elongation factor P hydroxylase AM356_RS01955 PF08891 YfcL protein AM356_RS01965 PF00583 Acetyltransferase (GNAT) family AM356_RS01970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM356_RS01970 PF01266 FAD dependent oxidoreductase AM356_RS01975 PF00109 Beta-ketoacyl synthase, N-terminal domain AM356_RS01975 PF02801 Beta-ketoacyl synthase, C-terminal domain AM356_RS01980 PF00892 EamA-like transporter family AM356_RS01985 PF12833 Helix-turn-helix domain AM356_RS01990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM356_RS01990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM356_RS01990 PF11890 Domain of unknown function (DUF3410) AM356_RS01995 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM356_RS01995 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM356_RS02000 PF01416 tRNA pseudouridine synthase AM356_RS02005 PF09335 SNARE associated Golgi protein AM356_RS02010 PF01039 Carboxyl transferase domain AM356_RS02010 PF17848 Acetyl-coA carboxylase zinc finger domain AM356_RS02015 PF08245 Mur ligase middle domain AM356_RS02015 PF02875 Mur ligase family, glutamate ligase domain AM356_RS02020 PF05036 Sporulation related domain AM356_RS02025 PF02674 Colicin V production protein AM356_RS02030 PF00156 Phosphoribosyl transferase domain AM356_RS02035 PF02441 Flavoprotein AM356_RS02040 PF08338 Domain of unknown function (DUF1731) AM356_RS02040 PF01370 NAD dependent epimerase/dehydratase family AM356_RS02045 PF02798 Glutathione S-transferase, N-terminal domain AM356_RS02045 PF00043 Glutathione S-transferase, C-terminal domain AM356_RS02050 PF00293 NUDIX domain AM356_RS02055 PF13407 Periplasmic binding protein domain AM356_RS02055 PF00356 Bacterial regulatory proteins, lacI family AM356_RS02060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM356_RS02070 PF03611 PTS system sugar-specific permease component AM356_RS02075 PF00842 Alanine racemase, C-terminal domain AM356_RS02075 PF01168 Alanine racemase, N-terminal domain AM356_RS02080 PF01011 PQQ enzyme repeat AM356_RS02085 PF01848 Hok/gef family AM356_RS02090 PF01848 Hok/gef family AM356_RS02095 PF01848 Hok/gef family AM356_RS02100 PF07085 DRTGG domain AM356_RS02100 PF01515 Phosphate acetyl/butaryl transferase AM356_RS02105 PF00871 Acetokinase family AM356_RS02110 PF04217 Protein of unknown function, DUF412 AM356_RS02115 PF03887 YfbU domain AM356_RS02120 PF13419 Haloacid dehalogenase-like hydrolase AM356_RS02125 PF02080 TrkA-C domain AM356_RS02125 PF03600 Citrate transporter AM356_RS02135 PF00155 Aminotransferase class I and II AM356_RS02140 PF03466 LysR substrate binding domain AM356_RS02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS02150 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM356_RS02155 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM356_RS02160 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM356_RS02160 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM356_RS02170 PF10531 SLBB domain AM356_RS02170 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM356_RS02170 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM356_RS02175 PF01568 Molydopterin dinucleotide binding domain AM356_RS02175 PF00384 Molybdopterin oxidoreductase AM356_RS02175 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM356_RS02175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM356_RS02180 PF00146 NADH dehydrogenase AM356_RS02185 PF12838 4Fe-4S dicluster domain AM356_RS02190 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM356_RS02195 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM356_RS02200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM356_RS02200 PF00361 Proton-conducting membrane transporter AM356_RS02205 PF00361 Proton-conducting membrane transporter AM356_RS02210 PF00361 Proton-conducting membrane transporter AM356_RS02225 PF00425 chorismate binding enzyme AM356_RS02230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM356_RS02230 PF16582 Middle domain of thiamine pyrophosphate AM356_RS02235 PF12697 Alpha/beta hydrolase family AM356_RS02240 PF00378 Enoyl-CoA hydratase/isomerase AM356_RS02245 PF13378 Enolase C-terminal domain-like AM356_RS02250 PF13193 AMP-binding enzyme C-terminal domain AM356_RS02250 PF00501 AMP-binding enzyme AM356_RS02255 PF06628 Catalase-related immune-responsive AM356_RS02255 PF00199 Catalase AM356_RS02260 PF07437 YfaZ precursor AM356_RS02265 PF03222 Tryptophan/tyrosine permease family AM356_RS02270 PF06004 Bacterial protein of unknown function (DUF903) AM356_RS02275 PF00111 2Fe-2S iron-sulfur cluster binding domain AM356_RS02280 PF00268 Ribonucleotide reductase, small chain AM356_RS02285 PF03477 ATP cone domain AM356_RS02285 PF00317 Ribonucleotide reductase, all-alpha domain AM356_RS02285 PF02867 Ribonucleotide reductase, barrel domain AM356_RS02295 PF03989 DNA gyrase C-terminal domain, beta-propeller AM356_RS02295 PF00521 DNA gyrase/topoisomerase IV, subunit A AM356_RS02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS02300 PF09456 RcsC Alpha-Beta-Loop (ABL) AM356_RS02300 PF00072 Response regulator receiver domain AM356_RS02300 PF00512 His Kinase A (phospho-acceptor) domain AM356_RS02305 PF00072 Response regulator receiver domain AM356_RS02305 PF00196 Bacterial regulatory proteins, luxR family AM356_RS02310 PF01627 Hpt domain AM356_RS02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS02310 PF16359 RcsD-ABL domain AM356_RS02335 PF00579 tRNA synthetases class I (W and Y) AM356_RS02430 PF10753 Toxin GhoT_OrtT AM356_RS02440 PF04976 DMSO reductase anchor subunit (DmsC) AM356_RS02445 PF12800 4Fe-4S binding domain AM356_RS02445 PF13247 4Fe-4S dicluster domain AM356_RS02450 PF00384 Molybdopterin oxidoreductase AM356_RS02450 PF01568 Molydopterin dinucleotide binding domain AM356_RS02450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM356_RS02455 PF00924 Mechanosensitive ion channel AM356_RS02460 PF03729 Short repeat of unknown function (DUF308) AM356_RS02465 PF01063 Amino-transferase class IV AM356_RS02475 PF03591 AzlC protein AM356_RS02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS02485 PF00512 His Kinase A (phospho-acceptor) domain AM356_RS02490 PF00486 Transcriptional regulatory protein, C terminal AM356_RS02490 PF00072 Response regulator receiver domain AM356_RS02500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM356_RS02505 PF00132 Bacterial transferase hexapeptide (six repeats) AM356_RS02515 PF03061 Thioesterase superfamily AM356_RS02520 PF02567 Phenazine biosynthesis-like protein AM356_RS02525 PF00854 POT family AM356_RS02530 PF07690 Major Facilitator Superfamily AM356_RS02535 PF03279 Bacterial lipid A biosynthesis acyltransferase AM356_RS02540 PF00072 Response regulator receiver domain AM356_RS02540 PF00196 Bacterial regulatory proteins, luxR family AM356_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS02545 PF00512 His Kinase A (phospho-acceptor) domain AM356_RS02550 PF13247 4Fe-4S dicluster domain AM356_RS02555 PF03916 Polysulphide reductase, NrfD AM356_RS02560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM356_RS02560 PF00384 Molybdopterin oxidoreductase AM356_RS02560 PF01568 Molydopterin dinucleotide binding domain AM356_RS02570 PF13991 BssS protein family AM356_RS02575 PF01979 Amidohydrolase family AM356_RS02600 PF10777 Inner membrane protein YlaC AM356_RS02605 PF00313 'Cold-shock' DNA-binding domain AM356_RS02610 PF10781 Dextransucrase DSRB AM356_RS02615 PF02308 MgtC family AM356_RS02620 PF05247 Flagellar transcriptional activator (FlhD) AM356_RS02625 PF05280 Flagellar transcriptional activator (FlhC) AM356_RS02630 PF01618 MotA/TolQ/ExbB proton channel family AM356_RS02635 PF00691 OmpA family AM356_RS02635 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM356_RS02640 PF01584 CheW-like domain AM356_RS02640 PF02895 Signal transducing histidine kinase, homodimeric domain AM356_RS02640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS02640 PF01627 Hpt domain AM356_RS02640 PF09078 CheY binding AM356_RS02645 PF01584 CheW-like domain AM356_RS02650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM356_RS02650 PF00672 HAMP domain AM356_RS02650 PF02203 Tar ligand binding domain homologue AM356_RS02655 PF02203 Tar ligand binding domain homologue AM356_RS02655 PF00672 HAMP domain AM356_RS02655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM356_RS02660 PF03705 CheR methyltransferase, all-alpha domain AM356_RS02660 PF01739 CheR methyltransferase, SAM binding domain AM356_RS02665 PF00072 Response regulator receiver domain AM356_RS02665 PF01339 CheB methylesterase AM356_RS02670 PF00072 Response regulator receiver domain AM356_RS02675 PF04344 Chemotaxis phosphatase, CheZ AM356_RS02690 PF01312 FlhB HrpN YscU SpaS Family AM356_RS02695 PF00771 FHIPEP family AM356_RS02705 PF13018 Extended Signal Peptide of Type V secretion system AM356_RS02705 PF13332 Hemagglutinin repeat AM356_RS02705 PF05860 haemagglutination activity domain AM356_RS02705 PF04829 Pre-toxin domain with VENN motif AM356_RS02710 PF05130 FlgN protein AM356_RS02715 PF04316 Anti-sigma-28 factor, FlgM AM356_RS02720 PF17656 FlgA N-terminal domain AM356_RS02720 PF13144 Chaperone for flagella basal body P-ring formation AM356_RS02725 PF00460 Flagella basal body rod protein AM356_RS02730 PF00460 Flagella basal body rod protein AM356_RS02730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM356_RS02735 PF13861 FlgD Tudor-like domain AM356_RS02735 PF13860 FlgD Ig-like domain AM356_RS02735 PF03963 Flagellar hook capping protein - N-terminal region AM356_RS02740 PF07559 Flagellar basal body protein FlaE AM356_RS02740 PF00460 Flagella basal body rod protein AM356_RS02740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM356_RS02745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM356_RS02745 PF00460 Flagella basal body rod protein AM356_RS02750 PF00460 Flagella basal body rod protein AM356_RS02750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM356_RS02755 PF02107 Flagellar L-ring protein AM356_RS02760 PF02119 Flagellar P-ring protein AM356_RS02765 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM356_RS02765 PF10135 Rod binding protein AM356_RS02770 PF00460 Flagella basal body rod protein AM356_RS02770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM356_RS02775 PF00669 Bacterial flagellin N-terminal helical region AM356_RS02780 PF01311 Bacterial export proteins, family 1 AM356_RS02785 PF01313 Bacterial export proteins, family 3 AM356_RS02790 PF00813 FliP family AM356_RS02795 PF04347 Flagellar biosynthesis protein, FliO AM356_RS02800 PF16973 Flagellar motor switch protein FliN N-terminal AM356_RS02800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM356_RS02805 PF02154 Flagellar motor switch protein FliM AM356_RS02805 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM356_RS02810 PF03748 Flagellar basal body-associated protein FliL AM356_RS02815 PF02120 Flagellar hook-length control protein FliK AM356_RS02820 PF02050 Flagellar FliJ protein AM356_RS02825 PF18269 T3SS EscN ATPase C-terminal domain AM356_RS02825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM356_RS02830 PF02108 Flagellar assembly protein FliH AM356_RS02835 PF14842 FliG N-terminal domain AM356_RS02835 PF01706 FliG C-terminal domain AM356_RS02835 PF14841 FliG middle domain AM356_RS02840 PF08345 Flagellar M-ring protein C-terminal AM356_RS02840 PF01514 Secretory protein of YscJ/FliF family AM356_RS02845 PF02049 Flagellar hook-basal body complex protein FliE AM356_RS02875 PF05400 Flagellar protein FliT AM356_RS02880 PF02561 Flagellar protein FliS AM356_RS02885 PF07195 Flagellar hook-associated protein 2 C-terminus AM356_RS02885 PF07196 Flagellin hook IN motif AM356_RS02885 PF02465 Flagellar hook-associated protein 2 N-terminus AM356_RS02890 PF00700 Bacterial flagellin C-terminal helical region AM356_RS02890 PF00669 Bacterial flagellin N-terminal helical region AM356_RS02895 PF00669 Bacterial flagellin N-terminal helical region AM356_RS02895 PF00700 Bacterial flagellin C-terminal helical region AM356_RS02900 PF04542 Sigma-70 region 2 AM356_RS02900 PF04539 Sigma-70 region 3 AM356_RS02900 PF04545 Sigma-70, region 4 AM356_RS02905 PF02899 Phage integrase, N-terminal SAM-like domain AM356_RS02910 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM356_RS02910 PF14850 DNA-binding domain of Proline dehydrogenase AM356_RS02910 PF01619 Proline dehydrogenase AM356_RS02910 PF00171 Aldehyde dehydrogenase family AM356_RS02915 PF00474 Sodium:solute symporter family AM356_RS02925 PF00324 Amino acid permease AM356_RS02930 PF00582 Universal stress protein family AM356_RS02940 PF00582 Universal stress protein family AM356_RS02945 PF06146 Phosphate-starvation-inducible E AM356_RS02950 PF13847 Methyltransferase domain AM356_RS02955 PF02659 Putative manganese efflux pump AM356_RS02960 PF03313 Serine dehydratase alpha chain AM356_RS02960 PF03315 Serine dehydratase beta chain AM356_RS02965 PF00293 NUDIX domain AM356_RS02970 PF04715 Anthranilate synthase component I, N terminal region AM356_RS02970 PF00425 chorismate binding enzyme AM356_RS02975 PF03701 Uncharacterised protein family (UPF0181) AM356_RS02980 PF13995 YebF-like protein AM356_RS02985 PF06440 DNA polymerase III, theta subunit AM356_RS02990 PF01235 Sodium:alanine symporter family AM356_RS02995 PF01510 N-acetylmuramoyl-L-alanine amidase AM356_RS03000 PF05525 Branched-chain amino acid transport protein AM356_RS03010 PF12833 Helix-turn-helix domain AM356_RS03020 PF00324 Amino acid permease AM356_RS03025 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AM356_RS03030 PF08543 Phosphomethylpyrimidine kinase AM356_RS03035 PF01791 DeoC/LacD family aldolase AM356_RS03040 PF00781 Diacylglycerol kinase catalytic domain AM356_RS03045 PF16325 Peptidase family U32 C-terminal domain AM356_RS03045 PF01136 Peptidase family U32 AM356_RS03050 PF00072 Response regulator receiver domain AM356_RS03050 PF00486 Transcriptional regulatory protein, C terminal AM356_RS03055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS03055 PF00512 His Kinase A (phospho-acceptor) domain AM356_RS03055 PF00672 HAMP domain AM356_RS03060 PF00873 AcrB/AcrD/AcrF family AM356_RS03065 PF00873 AcrB/AcrD/AcrF family AM356_RS03070 PF13533 Biotin-lipoyl like AM356_RS03080 PF07282 Putative transposase DNA-binding domain AM356_RS03080 PF01385 Probable transposase AM356_RS03080 PF12323 Helix-turn-helix domain AM356_RS03085 PF00854 POT family AM356_RS03100 PF07690 Major Facilitator Superfamily AM356_RS03110 PF00571 CBS domain AM356_RS03110 PF03448 MgtE intracellular N domain AM356_RS03110 PF01769 Divalent cation transporter AM356_RS03115 PF02541 Ppx/GppA phosphatase family AM356_RS03120 PF13089 Polyphosphate kinase N-terminal domain AM356_RS03120 PF17941 Polyphosphate kinase C-terminal domain 1 AM356_RS03120 PF13090 Polyphosphate kinase C-terminal domain 2 AM356_RS03120 PF02503 Polyphosphate kinase middle domain AM356_RS03125 PF13302 Acetyltransferase (GNAT) domain AM356_RS03130 PF00551 Formyl transferase AM356_RS03135 PF02769 AIR synthase related protein, C-terminal domain AM356_RS03135 PF00586 AIR synthase related protein, N-terminal domain AM356_RS03145 PF00860 Permease family AM356_RS03150 PF00924 Mechanosensitive ion channel AM356_RS03155 PF00308 Bacterial dnaA protein AM356_RS03160 PF03825 Nucleoside H+ symporter AM356_RS03165 PF03960 ArsC family AM356_RS03170 PF01435 Peptidase family M48 AM356_RS03170 PF07720 Tetratricopeptide repeat AM356_RS03175 PF01594 AI-2E family transporter AM356_RS03180 PF00578 AhpC/TSA family AM356_RS03185 PF01842 ACT domain AM356_RS03190 PF00701 Dihydrodipicolinate synthetase family AM356_RS03195 PF06804 NlpB/DapX lipoprotein AM356_RS03200 PF01259 SAICAR synthetase AM356_RS03205 PF04228 Putative neutral zinc metallopeptidase AM356_RS03210 PF04284 Protein of unknown function (DUF441) AM356_RS03215 PF08351 Domain of unknown function (DUF1726) AM356_RS03215 PF17176 tRNA-binding domain AM356_RS03215 PF13718 GNAT acetyltransferase 2 AM356_RS03215 PF05127 Helicase AM356_RS03220 PF13980 Uncharacterised protein family (UPF0370) AM356_RS03225 PF04304 Protein of unknown function (DUF454) AM356_RS03230 PF01385 Probable transposase AM356_RS03230 PF07282 Putative transposase DNA-binding domain AM356_RS03230 PF12323 Helix-turn-helix domain AM356_RS03240 PF02557 D-alanyl-D-alanine carboxypeptidase AM356_RS03245 PF01546 Peptidase family M20/M25/M40 AM356_RS03245 PF07687 Peptidase dimerisation domain AM356_RS03250 PF03960 ArsC family AM356_RS03260 PF00072 Response regulator receiver domain AM356_RS03260 PF00196 Bacterial regulatory proteins, luxR family AM356_RS03265 PF00390 Malic enzyme, N-terminal domain AM356_RS03265 PF01515 Phosphate acetyl/butaryl transferase AM356_RS03265 PF03949 Malic enzyme, NAD binding domain AM356_RS03280 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM356_RS03280 PF00326 Prolyl oligopeptidase family AM356_RS03285 PF00593 TonB dependent receptor AM356_RS03285 PF07715 TonB-dependent Receptor Plug Domain AM356_RS03290 PF13742 OB-fold nucleic acid binding domain AM356_RS03290 PF02601 Exonuclease VII, large subunit AM356_RS03295 PF00478 IMP dehydrogenase / GMP reductase domain AM356_RS03295 PF00571 CBS domain AM356_RS03300 PF00117 Glutamine amidotransferase class-I AM356_RS03300 PF00958 GMP synthase C terminal domain AM356_RS03300 PF02540 NAD synthase AM356_RS03305 PF10127 RNA repair pathway DNA polymerase beta family AM356_RS03320 PF03091 CutA1 divalent ion tolerance protein AM356_RS03325 PF04198 Putative sugar-binding domain AM356_RS03335 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS03340 PF00005 ABC transporter AM356_RS03345 PF01381 Helix-turn-helix AM356_RS03345 PF00717 Peptidase S24-like AM356_RS03385 PF00294 pfkB family carbohydrate kinase AM356_RS03400 PF02126 Phosphotriesterase family AM356_RS03405 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM356_RS03410 PF00881 Nitroreductase family AM356_RS03415 PF00196 Bacterial regulatory proteins, luxR family AM356_RS03415 PF00072 Response regulator receiver domain AM356_RS03420 PF08459 UvrC Helix-hairpin-helix N-terminal AM356_RS03420 PF02151 UvrB/uvrC motif AM356_RS03420 PF01541 GIY-YIG catalytic domain AM356_RS03425 PF01066 CDP-alcohol phosphatidyltransferase AM356_RS03455 PF06226 Protein of unknown function (DUF1007) AM356_RS03460 PF03824 High-affinity nickel-transport protein AM356_RS03475 PF07690 Major Facilitator Superfamily AM356_RS03480 PF00893 Small Multidrug Resistance protein AM356_RS03490 PF02600 Disulfide bond formation protein DsbB AM356_RS03495 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AM356_RS03500 PF07840 FadR C-terminal domain AM356_RS03500 PF00392 Bacterial regulatory proteins, gntR family AM356_RS03505 PF01266 FAD dependent oxidoreductase AM356_RS03510 PF00842 Alanine racemase, C-terminal domain AM356_RS03510 PF01168 Alanine racemase, N-terminal domain AM356_RS03515 PF17788 HypF Kae1-like domain AM356_RS03515 PF00708 Acylphosphatase AM356_RS03515 PF07503 HypF finger AM356_RS03515 PF01300 Telomere recombination AM356_RS03520 PF06629 MltA-interacting protein MipA AM356_RS03525 PF01263 Aldose 1-epimerase AM356_RS03530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM356_RS03530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM356_RS03540 PF01641 SelR domain AM356_RS03545 PF07023 Protein of unknown function (DUF1315) AM356_RS03550 PF00857 Isochorismatase family AM356_RS03555 PF00710 Asparaginase, N-terminal AM356_RS03555 PF17763 Glutaminase/Asparaginase C-terminal domain AM356_RS03560 PF01343 Peptidase family S49 AM356_RS03565 PF00881 Nitroreductase family AM356_RS03570 PF02769 AIR synthase related protein, C-terminal domain AM356_RS03570 PF00586 AIR synthase related protein, N-terminal domain AM356_RS03575 PF01131 DNA topoisomerase AM356_RS03575 PF01751 Toprim domain AM356_RS03580 PF03372 Endonuclease/Exonuclease/phosphatase family AM356_RS03585 PF03466 LysR substrate binding domain AM356_RS03585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS03595 PF00551 Formyl transferase AM356_RS03595 PF01842 ACT domain AM356_RS03600 PF02810 SEC-C motif AM356_RS03605 PF00072 Response regulator receiver domain AM356_RS03610 PF00483 Nucleotidyl transferase AM356_RS03615 PF01370 NAD dependent epimerase/dehydratase family AM356_RS03620 PF00816 H-NS histone family AM356_RS03625 PF00265 Thymidine kinase AM356_RS03630 PF00465 Iron-containing alcohol dehydrogenase AM356_RS03630 PF00171 Aldehyde dehydrogenase family AM356_RS03635 PF01914 MarC family integral membrane protein AM356_RS03640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM356_RS03640 PF00005 ABC transporter AM356_RS03645 PF00005 ABC transporter AM356_RS03645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM356_RS03650 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS03650 PF12911 N-terminal TM domain of oligopeptide transport permease C AM356_RS03655 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS03660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM356_RS03665 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM356_RS03665 PF04324 BFD-like [2Fe-2S] binding domain AM356_RS03665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM356_RS03665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM356_RS03665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM356_RS03670 PF13806 Rieske-like [2Fe-2S] domain AM356_RS03675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM356_RS03675 PF10414 Sirohaem synthase dimerisation region AM356_RS03675 PF14824 Sirohaem biosynthesis protein central AM356_RS03680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM356_RS03685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM356_RS03690 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS03695 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS03695 PF12911 N-terminal TM domain of oligopeptide transport permease C AM356_RS03700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM356_RS03700 PF00005 ABC transporter AM356_RS03705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM356_RS03705 PF00005 ABC transporter AM356_RS03710 PF01381 Helix-turn-helix AM356_RS03715 PF00419 Fimbrial protein AM356_RS03720 PF00419 Fimbrial protein AM356_RS03725 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS03725 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS03730 PF13954 PapC N-terminal domain AM356_RS03730 PF00577 Outer membrane usher protein AM356_RS03730 PF13953 PapC C-terminal domain AM356_RS03735 PF00419 Fimbrial protein AM356_RS03745 PF00155 Aminotransferase class I and II AM356_RS03750 PF02028 BCCT, betaine/carnitine/choline family transporter AM356_RS03755 PF13977 BetI-type transcriptional repressor, C-terminal AM356_RS03755 PF00440 Bacterial regulatory proteins, tetR family AM356_RS03760 PF00171 Aldehyde dehydrogenase family AM356_RS03765 PF00732 GMC oxidoreductase AM356_RS03765 PF05199 GMC oxidoreductase AM356_RS03770 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM356_RS03775 PF07969 Amidohydrolase family AM356_RS03785 PF00490 Delta-aminolevulinic acid dehydratase AM356_RS03795 PF10769 Protein of unknown function (DUF2594) AM356_RS03800 PF01256 Carbohydrate kinase AM356_RS03805 PF00582 Universal stress protein family AM356_RS03815 PF00582 Universal stress protein family AM356_RS03840 PF06738 Putative threonine/serine exporter AM356_RS03845 PF12821 Threonine/Serine exporter, ThrE AM356_RS03855 PF04231 Endonuclease I AM356_RS03865 PF02562 PhoH-like protein AM356_RS03870 PF05656 Protein of unknown function (DUF805) AM356_RS03885 PF02322 Cytochrome bd terminal oxidase subunit II AM356_RS03890 PF01654 Cytochrome bd terminal oxidase subunit I AM356_RS03895 PF00392 Bacterial regulatory proteins, gntR family AM356_RS03895 PF00155 Aminotransferase class I and II AM356_RS03900 PF01810 LysE type translocator AM356_RS03905 PF01037 Lrp/AsnC ligand binding domain AM356_RS03910 PF00005 ABC transporter AM356_RS03915 PF01032 FecCD transport family AM356_RS03920 PF01497 Periplasmic binding protein AM356_RS03925 PF05171 Haemin-degrading HemS.ChuX domain AM356_RS03930 PF00593 TonB dependent receptor AM356_RS03930 PF07715 TonB-dependent Receptor Plug Domain AM356_RS03935 PF00593 TonB dependent receptor AM356_RS03935 PF07715 TonB-dependent Receptor Plug Domain AM356_RS03940 PF10636 Hemin uptake protein hemP AM356_RS03945 PF00793 DAHP synthetase I family AM356_RS03950 PF03618 Kinase/pyrophosphorylase AM356_RS03955 PF00391 PEP-utilising enzyme, mobile domain AM356_RS03955 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM356_RS03955 PF02896 PEP-utilising enzyme, TIM barrel domain AM356_RS03960 PF01594 AI-2E family transporter AM356_RS03965 PF13183 4Fe-4S dicluster domain AM356_RS03965 PF02913 FAD linked oxidases, C-terminal domain AM356_RS03965 PF01565 FAD binding domain AM356_RS03970 PF03061 Thioesterase superfamily AM356_RS03980 PF01521 Iron-sulphur cluster biosynthesis AM356_RS03985 PF01458 Uncharacterized protein family (UPF0051) AM356_RS03990 PF00005 ABC transporter AM356_RS03995 PF01458 Uncharacterized protein family (UPF0051) AM356_RS04000 PF00266 Aminotransferase class-V AM356_RS04005 PF02657 Fe-S metabolism associated domain AM356_RS04010 PF03734 L,D-transpeptidase catalytic domain AM356_RS04010 PF01476 LysM domain AM356_RS04010 PF17969 L,D-transpeptidase C-terminal domain AM356_RS04015 PF04728 Lipoprotein leucine-zipper AM356_RS04025 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM356_RS04030 PF13520 Amino acid permease AM356_RS04035 PF02887 Pyruvate kinase, alpha/beta domain AM356_RS04035 PF00224 Pyruvate kinase, barrel domain AM356_RS04050 PF01554 MatE AM356_RS04055 PF00677 Lumazine binding domain AM356_RS04065 PF07690 Major Facilitator Superfamily AM356_RS04070 PF03466 LysR substrate binding domain AM356_RS04070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS04075 PF00356 Bacterial regulatory proteins, lacI family AM356_RS04085 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM356_RS04085 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM356_RS04090 PF01925 Sulfite exporter TauE/SafE AM356_RS04105 PF01872 RibD C-terminal domain AM356_RS04110 PF00462 Glutaredoxin AM356_RS04115 PF01797 Transposase IS200 like AM356_RS04120 PF07282 Putative transposase DNA-binding domain AM356_RS04120 PF12323 Helix-turn-helix domain AM356_RS04120 PF01385 Probable transposase AM356_RS04125 PF00929 Exonuclease AM356_RS04130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM356_RS04135 PF06945 Protein of unknown function (DUF1289) AM356_RS04140 PF01047 MarR family AM356_RS04145 PF05433 Glycine zipper 2TM domain AM356_RS04150 PF03702 Anhydro-N-acetylmuramic acid kinase AM356_RS04155 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM356_RS04155 PF01243 Pyridoxamine 5'-phosphate oxidase AM356_RS04160 PF00579 tRNA synthetases class I (W and Y) AM356_RS04160 PF01479 S4 domain AM356_RS04165 PF08543 Phosphomethylpyrimidine kinase AM356_RS04170 PF00043 Glutathione S-transferase, C-terminal domain AM356_RS04170 PF02798 Glutathione S-transferase, N-terminal domain AM356_RS04180 PF00005 ABC transporter AM356_RS04185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM356_RS04185 PF00005 ABC transporter AM356_RS04190 PF12911 N-terminal TM domain of oligopeptide transport permease C AM356_RS04190 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS04195 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS04200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM356_RS04205 PF00158 Sigma-54 interaction domain AM356_RS04205 PF02954 Bacterial regulatory protein, Fis family AM356_RS04210 PF04012 PspA/IM30 family AM356_RS04215 PF06667 Phage shock protein B AM356_RS04220 PF04024 PspC domain AM356_RS04230 PF04317 YcjX-like family, DUF463 AM356_RS04235 PF05128 Domain of unknown function (DUF697) AM356_RS04245 PF00158 Sigma-54 interaction domain AM356_RS04245 PF18024 Helix-turn-helix domain AM356_RS04250 PF08534 Redoxin AM356_RS04255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM356_RS04270 PF01544 CorA-like Mg2+ transporter protein AM356_RS04275 PF01171 PP-loop family AM356_RS04280 PF01810 LysE type translocator AM356_RS04290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM356_RS04295 PF13505 Outer membrane protein beta-barrel domain AM356_RS04300 PF04269 Protein of unknown function, DUF440 AM356_RS04305 PF13396 Phospholipase_D-nuclease N-terminal AM356_RS04305 PF13091 PLD-like domain AM356_RS04315 PF03544 Gram-negative bacterial TonB protein C-terminal AM356_RS04320 PF03061 Thioesterase superfamily AM356_RS04325 PF04279 Intracellular septation protein A AM356_RS04330 PF00916 Sulfate permease family AM356_RS04330 PF01740 STAS domain AM356_RS04340 PF03922 OmpW family AM356_RS04350 PF00290 Tryptophan synthase alpha chain AM356_RS04355 PF00291 Pyridoxal-phosphate dependent enzyme AM356_RS04360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM356_RS04360 PF00218 Indole-3-glycerol phosphate synthase AM356_RS04365 PF02885 Glycosyl transferase family, helical bundle domain AM356_RS04365 PF00591 Glycosyl transferase family, a/b domain AM356_RS04370 PF00117 Glutamine amidotransferase class-I AM356_RS04375 PF00425 chorismate binding enzyme AM356_RS04375 PF04715 Anthranilate synthase component I, N terminal region AM356_RS04380 PF02811 PHP domain AM356_RS04385 PF01300 Telomere recombination AM356_RS04390 PF01479 S4 domain AM356_RS04390 PF00849 RNA pseudouridylate synthase AM356_RS04400 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM356_RS04405 PF00106 short chain dehydrogenase AM356_RS04410 PF01343 Peptidase family S49 AM356_RS04410 PF08496 Peptidase family S49 N-terminal AM356_RS04415 PF10692 Protein of unknown function (DUF2498) AM356_RS04420 PF01131 DNA topoisomerase AM356_RS04420 PF08272 Topoisomerase I zinc-ribbon-like AM356_RS04420 PF01396 Topoisomerase DNA binding C4 zinc finger AM356_RS04420 PF01751 Toprim domain AM356_RS04425 PF00080 Copper/zinc superoxide dismutase (SODC) AM356_RS04440 PF03466 LysR substrate binding domain AM356_RS04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS04450 PF00330 Aconitase family (aconitate hydratase) AM356_RS04450 PF00694 Aconitase C-terminal domain AM356_RS04460 PF03180 NLPA lipoprotein AM356_RS04465 PF00925 GTP cyclohydrolase II AM356_RS04470 PF01569 PAP2 superfamily AM356_RS04475 PF06305 Lipopolysaccharide assembly protein A domain AM356_RS04480 PF18073 Rubredoxin metal binding domain AM356_RS04485 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM356_RS04490 PF01253 Translation initiation factor SUI1 AM356_RS04495 PF08206 Ribonuclease B OB domain AM356_RS04495 PF00773 RNB domain AM356_RS04495 PF00575 S1 RNA binding domain AM356_RS04500 PF00730 HhH-GPD superfamily base excision DNA repair protein AM356_RS04500 PF10576 Iron-sulfur binding domain of endonuclease III AM356_RS04500 PF00633 Helix-hairpin-helix motif AM356_RS04505 PF02508 Rnf-Nqr subunit, membrane protein AM356_RS04510 PF04205 FMN-binding domain AM356_RS04515 PF03116 NQR2, RnfD, RnfE family AM356_RS04520 PF13237 4Fe-4S dicluster domain AM356_RS04520 PF13375 RnfC Barrel sandwich hybrid domain AM356_RS04520 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM356_RS04520 PF10531 SLBB domain AM356_RS04525 PF04060 Putative Fe-S cluster AM356_RS04530 PF02508 Rnf-Nqr subunit, membrane protein AM356_RS04535 PF10754 Protein of unknown function (DUF2569) AM356_RS04540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM356_RS04540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM356_RS04545 PF13593 SBF-like CPA transporter family (DUF4137) AM356_RS04550 PF00962 Adenosine/AMP deaminase AM356_RS04560 PF06097 Bacterial protein of unknown function (DUF945) AM356_RS04565 PF10415 Fumarase C C-terminus AM356_RS04565 PF00206 Lyase AM356_RS04570 PF05472 DNA replication terminus site-binding protein (Ter protein) AM356_RS04575 PF07690 Major Facilitator Superfamily AM356_RS04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS04580 PF03466 LysR substrate binding domain AM356_RS04585 PF00480 ROK family AM356_RS04600 PF06932 Protein of unknown function (DUF1283) AM356_RS04605 PF00106 short chain dehydrogenase AM356_RS04615 PF05433 Glycine zipper 2TM domain AM356_RS04675 PF09905 DNA-binding protein VF530 AM356_RS04680 PF12833 Helix-turn-helix domain AM356_RS04685 PF00155 Aminotransferase class I and II AM356_RS04690 PF03553 Na+/H+ antiporter family AM356_RS04700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM356_RS04700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM356_RS04705 PF01810 LysE type translocator AM356_RS04715 PF01212 Beta-eliminating lyase AM356_RS04720 PF00012 Hsp70 protein AM356_RS04730 PF02321 Outer membrane efflux protein AM356_RS04735 PF04632 Fusaric acid resistance protein family AM356_RS04740 PF00529 HlyD membrane-fusion protein of T1SS AM356_RS04740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM356_RS04755 PF07690 Major Facilitator Superfamily AM356_RS04765 PF07690 Major Facilitator Superfamily AM356_RS04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS04770 PF03466 LysR substrate binding domain AM356_RS04775 PF01979 Amidohydrolase family AM356_RS04780 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM356_RS04785 PF12848 ABC transporter AM356_RS04785 PF00005 ABC transporter AM356_RS04795 PF00440 Bacterial regulatory proteins, tetR family AM356_RS04795 PF17934 Tetracyclin repressor-like, C-terminal domain AM356_RS04800 PF07690 Major Facilitator Superfamily AM356_RS04805 PF03466 LysR substrate binding domain AM356_RS04805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS04810 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM356_RS04815 PF07690 Major Facilitator Superfamily AM356_RS04830 PF01053 Cys/Met metabolism PLP-dependent enzyme AM356_RS04835 PF03180 NLPA lipoprotein AM356_RS04850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM356_RS04855 PF07478 D-ala D-ala ligase C-terminus AM356_RS04855 PF01820 D-ala D-ala ligase N-terminus AM356_RS04860 PF12848 ABC transporter AM356_RS04860 PF00005 ABC transporter AM356_RS04865 PF04266 ASCH domain AM356_RS04870 PF02805 Metal binding domain of Ada AM356_RS04870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM356_RS04870 PF12833 Helix-turn-helix domain AM356_RS04870 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM356_RS04875 PF00730 HhH-GPD superfamily base excision DNA repair protein AM356_RS04885 PF01810 LysE type translocator AM356_RS04895 PF01042 Endoribonuclease L-PSP AM356_RS04900 PF00291 Pyridoxal-phosphate dependent enzyme AM356_RS04905 PF00701 Dihydrodipicolinate synthetase family AM356_RS04910 PF02734 DAK2 domain AM356_RS04915 PF02733 Dak1 domain AM356_RS04920 PF01970 Tripartite tricarboxylate transporter TctA family AM356_RS04930 PF03401 Tripartite tricarboxylate transporter family receptor AM356_RS04935 PF00455 DeoR C terminal sensor domain AM356_RS04935 PF08220 DeoR-like helix-turn-helix domain AM356_RS04940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM356_RS04940 PF00384 Molybdopterin oxidoreductase AM356_RS04940 PF01568 Molydopterin dinucleotide binding domain AM356_RS04945 PF12800 4Fe-4S binding domain AM356_RS04945 PF13247 4Fe-4S dicluster domain AM356_RS04950 PF04976 DMSO reductase anchor subunit (DmsC) AM356_RS04955 PF02613 Nitrate reductase delta subunit AM356_RS04960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM356_RS04965 PF12796 Ankyrin repeats (3 copies) AM356_RS04975 PF03814 Potassium-transporting ATPase A subunit AM356_RS04985 PF02669 K+-transporting ATPase, c chain AM356_RS04990 PF13493 Domain of unknown function (DUF4118) AM356_RS04990 PF13492 GAF domain AM356_RS04990 PF02702 Osmosensitive K+ channel His kinase sensor domain AM356_RS04990 PF00512 His Kinase A (phospho-acceptor) domain AM356_RS04990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS04995 PF00486 Transcriptional regulatory protein, C terminal AM356_RS04995 PF00072 Response regulator receiver domain AM356_RS05005 PF00005 ABC transporter AM356_RS05010 PF13533 Biotin-lipoyl like AM356_RS05015 PF01112 Asparaginase AM356_RS05020 PF00589 Phage integrase family AM356_RS05020 PF02899 Phage integrase, N-terminal SAM-like domain AM356_RS05025 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AM356_RS05025 PF01048 Phosphorylase superfamily AM356_RS05125 PF13192 Thioredoxin domain AM356_RS05125 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM356_RS05130 PF00578 AhpC/TSA family AM356_RS05130 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM356_RS05140 PF03551 Transcriptional regulator PadR-like family AM356_RS05145 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM356_RS05150 PF00109 Beta-ketoacyl synthase, N-terminal domain AM356_RS05150 PF08659 KR domain AM356_RS05150 PF00550 Phosphopantetheine attachment site AM356_RS05150 PF02801 Beta-ketoacyl synthase, C-terminal domain AM356_RS05150 PF00698 Acyl transferase domain AM356_RS05150 PF08240 Alcohol dehydrogenase GroES-like domain AM356_RS05150 PF16197 Ketoacyl-synthetase C-terminal extension AM356_RS05150 PF14765 Polyketide synthase dehydratase AM356_RS05165 PF13247 4Fe-4S dicluster domain AM356_RS05165 PF12800 4Fe-4S binding domain AM356_RS05170 PF00384 Molybdopterin oxidoreductase AM356_RS05170 PF01568 Molydopterin dinucleotide binding domain AM356_RS05170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM356_RS05175 PF00027 Cyclic nucleotide-binding domain AM356_RS05175 PF00325 Bacterial regulatory proteins, crp family AM356_RS05180 PF00582 Universal stress protein family AM356_RS05185 PF02233 NAD(P) transhydrogenase beta subunit AM356_RS05190 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM356_RS05190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM356_RS05190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM356_RS05195 PF07338 Protein of unknown function (DUF1471) AM356_RS05200 PF13520 Amino acid permease AM356_RS05210 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS05210 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS05215 PF13953 PapC C-terminal domain AM356_RS05215 PF00577 Outer membrane usher protein AM356_RS05215 PF13954 PapC N-terminal domain AM356_RS05230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM356_RS05230 PF11898 Domain of unknown function (DUF3418) AM356_RS05230 PF00271 Helicase conserved C-terminal domain AM356_RS05230 PF04408 Helicase associated domain (HA2) AM356_RS05230 PF00270 DEAD/DEAH box helicase AM356_RS05235 PF02525 Flavodoxin-like fold AM356_RS05245 PF02525 Flavodoxin-like fold AM356_RS05260 PF13953 PapC C-terminal domain AM356_RS05260 PF13954 PapC N-terminal domain AM356_RS05260 PF00577 Outer membrane usher protein AM356_RS05270 PF07027 Protein of unknown function (DUF1318) AM356_RS05275 PF13617 YnbE-like lipoprotein AM356_RS05280 PF11739 Dicarboxylate transport AM356_RS05285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM356_RS05285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM356_RS05290 PF02203 Tar ligand binding domain homologue AM356_RS05290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM356_RS05290 PF00672 HAMP domain AM356_RS05295 PF00440 Bacterial regulatory proteins, tetR family AM356_RS05300 PF06445 GyrI-like small molecule binding domain AM356_RS05300 PF12833 Helix-turn-helix domain AM356_RS05310 PF00005 ABC transporter AM356_RS05315 PF03649 Uncharacterised protein family (UPF0014) AM356_RS05320 PF03692 Putative zinc- or iron-chelating domain AM356_RS05325 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM356_RS05330 PF13406 Transglycosylase SLT domain AM356_RS05335 PF05166 YcgL domain AM356_RS05340 PF03775 Septum formation inhibitor MinC, C-terminal domain AM356_RS05340 PF05209 Septum formation inhibitor MinC, N-terminal domain AM356_RS05345 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM356_RS05350 PF03776 Septum formation topological specificity factor MinE AM356_RS05355 PF01612 3'-5' exonuclease AM356_RS05355 PF00570 HRDC domain AM356_RS05360 PF00501 AMP-binding enzyme AM356_RS05360 PF13193 AMP-binding enzyme C-terminal domain AM356_RS05365 PF03843 Outer membrane lipoprotein Slp family AM356_RS05370 PF00814 Glycoprotease family AM356_RS05375 PF13307 Helicase C-terminal domain AM356_RS05375 PF04851 Type III restriction enzyme, res subunit AM356_RS05380 PF01042 Endoribonuclease L-PSP AM356_RS05385 PF11066 Protein of unknown function (DUF2867) AM356_RS05385 PF13460 NAD(P)H-binding AM356_RS05390 PF00893 Small Multidrug Resistance protein AM356_RS05395 PF00893 Small Multidrug Resistance protein AM356_RS05400 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM356_RS05400 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM356_RS05405 PF01380 SIS domain AM356_RS05405 PF01418 Helix-turn-helix domain, rpiR family AM356_RS05410 PF00224 Pyruvate kinase, barrel domain AM356_RS05410 PF02887 Pyruvate kinase, alpha/beta domain AM356_RS05415 PF03279 Bacterial lipid A biosynthesis acyltransferase AM356_RS05420 PF08525 Opacity-associated protein A N-terminal motif AM356_RS05420 PF01551 Peptidase family M23 AM356_RS05420 PF01476 LysM domain AM356_RS05425 PF01297 Zinc-uptake complex component A periplasmic AM356_RS05430 PF00005 ABC transporter AM356_RS05435 PF00950 ABC 3 transport family AM356_RS05470 PF03527 RHS protein AM356_RS05470 PF05593 RHS Repeat AM356_RS05515 PF03527 RHS protein AM356_RS05515 PF05593 RHS Repeat AM356_RS05525 PF04717 Type VI secretion system, phage-baseplate injector AM356_RS05530 PF05638 Type VI secretion system effector, Hcp AM356_RS05535 PF05491 RuvB C-terminal winged helix domain AM356_RS05535 PF17864 RuvB AAA lid domain AM356_RS05535 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM356_RS05540 PF07499 RuvA, C-terminal domain AM356_RS05540 PF01330 RuvA N terminal domain AM356_RS05545 PF02075 Crossover junction endodeoxyribonuclease RuvC AM356_RS05550 PF01709 Transcriptional regulator AM356_RS05555 PF00293 NUDIX domain AM356_RS05560 PF02938 GAD domain AM356_RS05560 PF01336 OB-fold nucleic acid binding domain AM356_RS05560 PF00152 tRNA synthetases class II (D, K and N) AM356_RS05565 PF01124 MAPEG family AM356_RS05570 PF13649 Methyltransferase domain AM356_RS05575 PF08003 Protein of unknown function (DUF1698) AM356_RS05580 PF00005 ABC transporter AM356_RS05580 PF16326 ABC transporter C-terminal domain AM356_RS05580 PF12848 ABC transporter AM356_RS05590 PF03932 CutC family AM356_RS05595 PF06185 YecM protein AM356_RS05600 PF03485 Arginyl tRNA synthetase N terminal domain AM356_RS05600 PF00750 tRNA synthetases class I (R) AM356_RS05600 PF05746 DALR anticodon binding domain AM356_RS05610 PF03023 Lipid II flippase MurJ AM356_RS05615 PF13302 Acetyltransferase (GNAT) domain AM356_RS05620 PF07690 Major Facilitator Superfamily AM356_RS05630 PF02613 Nitrate reductase delta subunit AM356_RS05645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM356_RS05655 PF00916 Sulfate permease family AM356_RS05655 PF01740 STAS domain AM356_RS05665 PF04055 Radical SAM superfamily AM356_RS05665 PF16199 Radical_SAM C-terminal domain AM356_RS05670 PF00793 DAHP synthetase I family AM356_RS05675 PF13369 Transglutaminase-like superfamily AM356_RS05680 PF13847 Methyltransferase domain AM356_RS05680 PF17827 PrmC N-terminal domain AM356_RS05685 PF03462 PCRF domain AM356_RS05685 PF00472 RF-1 domain AM356_RS05690 PF01488 Shikimate / quinate 5-dehydrogenase AM356_RS05690 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM356_RS05690 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM356_RS05695 PF03550 Outer membrane lipoprotein LolB AM356_RS05700 PF00288 GHMP kinases N terminal domain AM356_RS05700 PF08544 GHMP kinases C terminal AM356_RS05705 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM356_RS05705 PF14572 Phosphoribosyl synthetase-associated domain AM356_RS05710 PF10762 Protein of unknown function (DUF2583) AM356_RS05715 PF01195 Peptidyl-tRNA hydrolase AM356_RS05720 PF06071 Protein of unknown function (DUF933) AM356_RS05720 PF01926 50S ribosome-binding GTPase AM356_RS05755 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS05755 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS05760 PF00577 Outer membrane usher protein AM356_RS05760 PF13954 PapC N-terminal domain AM356_RS05775 PF03306 Alpha-acetolactate decarboxylase AM356_RS05780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM356_RS05780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM356_RS05780 PF00205 Thiamine pyrophosphate enzyme, central domain AM356_RS05785 PF09335 SNARE associated Golgi protein AM356_RS05800 PF00392 Bacterial regulatory proteins, gntR family AM356_RS05800 PF07729 FCD domain AM356_RS05805 PF01266 FAD dependent oxidoreductase AM356_RS05810 PF12833 Helix-turn-helix domain AM356_RS05815 PF03099 Biotin/lipoate A/B protein ligase family AM356_RS05815 PF10437 Bacterial lipoate protein ligase C-terminus AM356_RS05820 PF00877 NlpC/P60 family AM356_RS05825 PF00892 EamA-like transporter family AM356_RS05830 PF00892 EamA-like transporter family AM356_RS05835 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM356_RS05840 PF01522 Polysaccharide deacetylase AM356_RS05845 PF00551 Formyl transferase AM356_RS05845 PF02911 Formyl transferase, C-terminal domain AM356_RS05845 PF01370 NAD dependent epimerase/dehydratase family AM356_RS05850 PF00535 Glycosyl transferase family 2 AM356_RS05855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM356_RS05860 PF00005 ABC transporter AM356_RS05865 PF01032 FecCD transport family AM356_RS05870 PF00216 Bacterial DNA-binding protein AM356_RS05875 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM356_RS05875 PF03484 tRNA synthetase B5 domain AM356_RS05875 PF03147 Ferredoxin-fold anticodon binding domain AM356_RS05875 PF03483 B3/4 domain AM356_RS05875 PF01588 Putative tRNA binding domain AM356_RS05880 PF01409 tRNA synthetases class II core domain (F) AM356_RS05880 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM356_RS05885 PF00453 Ribosomal protein L20 AM356_RS05890 PF01632 Ribosomal protein L35 AM356_RS05895 PF05198 Translation initiation factor IF-3, N-terminal domain AM356_RS05895 PF00707 Translation initiation factor IF-3, C-terminal domain AM356_RS05900 PF03129 Anticodon binding domain AM356_RS05900 PF02824 TGS domain AM356_RS05900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM356_RS05900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM356_RS05905 PF09160 FimH, mannose binding AM356_RS05915 PF01588 Putative tRNA binding domain AM356_RS05925 PF01914 MarC family integral membrane protein AM356_RS05930 PF01464 Transglycosylase SLT domain AM356_RS05935 PF01297 Zinc-uptake complex component A periplasmic AM356_RS05940 PF00005 ABC transporter AM356_RS05945 PF00950 ABC 3 transport family AM356_RS05950 PF00950 ABC 3 transport family AM356_RS05955 PF03881 Fructosamine kinase AM356_RS05960 PF14002 YniB-like protein AM356_RS05965 PF13419 Haloacid dehalogenase-like hydrolase AM356_RS05970 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM356_RS05975 PF00375 Sodium:dicarboxylate symporter family AM356_RS05980 PF01435 Peptidase family M48 AM356_RS05995 PF03572 Peptidase family S41 AM356_RS05995 PF11818 C-terminal domain of tail specific protease (DUF3340) AM356_RS05995 PF00595 PDZ domain AM356_RS05995 PF17804 Tail specific protease N-terminal domain AM356_RS06000 PF04352 ProQ/FINO family AM356_RS06000 PF17516 ProQ C-terminal domain AM356_RS06005 PF13185 GAF domain AM356_RS06010 PF04403 Paraquat-inducible protein A AM356_RS06015 PF02470 MlaD protein AM356_RS06025 PF10709 Protein of unknown function (DUF2511) AM356_RS06030 PF05425 Copper resistance protein D AM356_RS06035 PF04234 CopC domain AM356_RS06040 PF00210 Ferritin-like domain AM356_RS06045 PF00582 Universal stress protein family AM356_RS06060 PF02811 PHP domain AM356_RS06065 PF07282 Putative transposase DNA-binding domain AM356_RS06065 PF01385 Probable transposase AM356_RS06065 PF12323 Helix-turn-helix domain AM356_RS06070 PF01797 Transposase IS200 like AM356_RS06075 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AM356_RS06080 PF00561 alpha/beta hydrolase fold AM356_RS06085 PF06530 Phage antitermination protein Q AM356_RS06090 PF00557 Metallopeptidase family M24 AM356_RS06120 PF04325 Protein of unknown function (DUF465) AM356_RS06125 PF08349 Protein of unknown function (DUF1722) AM356_RS06135 PF08242 Methyltransferase domain AM356_RS06140 PF01507 Phosphoadenosine phosphosulfate reductase family AM356_RS06140 PF11922 Domain of unknown function (DUF3440) AM356_RS06145 PF02195 ParB-like nuclease domain AM356_RS06165 PF00485 Phosphoribulokinase / Uridine kinase family AM356_RS06175 PF05368 NmrA-like family AM356_RS06180 PF01638 HxlR-like helix-turn-helix AM356_RS06190 PF00011 Hsp20/alpha crystallin family AM356_RS06195 PF00313 'Cold-shock' DNA-binding domain AM356_RS06210 PF00180 Isocitrate/isopropylmalate dehydrogenase AM356_RS06215 PF01966 HD domain AM356_RS06225 PF00180 Isocitrate/isopropylmalate dehydrogenase AM356_RS06230 PF05662 Coiled stalk of trimeric autotransporter adhesin AM356_RS06230 PF03895 YadA-like membrane anchor domain AM356_RS06330 PF03354 Phage Terminase AM356_RS06370 PF00959 Phage lysozyme AM356_RS06395 PF00011 Hsp20/alpha crystallin family AM356_RS06400 PF00313 'Cold-shock' DNA-binding domain AM356_RS06405 PF06530 Phage antitermination protein Q AM356_RS06410 PF06147 Protein of unknown function (DUF968) AM356_RS06450 PF00717 Peptidase S24-like AM356_RS06450 PF01381 Helix-turn-helix AM356_RS06465 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain AM356_RS06465 PF00589 Phage integrase family AM356_RS06470 PF00180 Isocitrate/isopropylmalate dehydrogenase AM356_RS06475 PF00849 RNA pseudouridylate synthase AM356_RS06480 PF00293 NUDIX domain AM356_RS06490 PF04356 Protein of unknown function (DUF489) AM356_RS06495 PF00206 Lyase AM356_RS06495 PF08328 Adenylosuccinate lyase C-terminal AM356_RS06500 PF00486 Transcriptional regulatory protein, C terminal AM356_RS06500 PF00072 Response regulator receiver domain AM356_RS06505 PF08918 PhoQ Sensor AM356_RS06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS06510 PF08007 Cupin superfamily protein AM356_RS06520 PF01546 Peptidase family M20/M25/M40 AM356_RS06520 PF07687 Peptidase dimerisation domain AM356_RS06525 PF02146 Sir2 family AM356_RS06530 PF12704 MacB-like periplasmic core domain AM356_RS06530 PF02687 FtsX-like permease family AM356_RS06535 PF00005 ABC transporter AM356_RS06540 PF02687 FtsX-like permease family AM356_RS06540 PF12704 MacB-like periplasmic core domain AM356_RS06545 PF00270 DEAD/DEAH box helicase AM356_RS06545 PF17757 UvrB interaction domain AM356_RS06545 PF02559 CarD-like/TRCF domain AM356_RS06545 PF03461 TRCF domain AM356_RS06545 PF00271 Helicase conserved C-terminal domain AM356_RS06550 PF05433 Glycine zipper 2TM domain AM356_RS06555 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM356_RS06560 PF05728 Uncharacterised protein family (UPF0227) AM356_RS06565 PF00933 Glycosyl hydrolase family 3 N terminal domain AM356_RS06575 PF13036 Peptidoglycan-synthase activator LpoB AM356_RS06580 PF07233 Protein of unknown function (DUF1425) AM356_RS06585 PF01230 HIT domain AM356_RS06590 PF01026 TatD related DNase AM356_RS06595 PF09115 DNA polymerase III, delta subunit, C terminal AM356_RS06600 PF02223 Thymidylate kinase AM356_RS06605 PF02618 YceG-like family AM356_RS06610 PF01063 Amino-transferase class IV AM356_RS06615 PF02801 Beta-ketoacyl synthase, C-terminal domain AM356_RS06615 PF00109 Beta-ketoacyl synthase, N-terminal domain AM356_RS06620 PF00550 Phosphopantetheine attachment site AM356_RS06630 PF00698 Acyl transferase domain AM356_RS06635 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM356_RS06635 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM356_RS06640 PF02504 Fatty acid synthesis protein AM356_RS06645 PF01783 Ribosomal L32p protein family AM356_RS06650 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM356_RS06655 PF02545 Maf-like protein AM356_RS06665 PF01479 S4 domain AM356_RS06665 PF00849 RNA pseudouridylate synthase AM356_RS06670 PF12111 Polyribonucleotide phosphorylase C terminal AM356_RS06670 PF00575 S1 RNA binding domain AM356_RS06670 PF10150 Ribonuclease E/G family AM356_RS06675 PF04363 Protein of unknown function (DUF496) AM356_RS06680 PF01306 LacY proton/sugar symporter AM356_RS06685 PF00929 Exonuclease AM356_RS06685 PF08411 Exonuclease C-terminal AM356_RS06695 PF01565 FAD binding domain AM356_RS06695 PF09330 D-lactate dehydrogenase, membrane binding AM356_RS06700 PF03466 LysR substrate binding domain AM356_RS06700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS06705 PF00205 Thiamine pyrophosphate enzyme, central domain AM356_RS06705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM356_RS06705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM356_RS06710 PF00082 Subtilase family AM356_RS06710 PF03797 Autotransporter beta-domain AM356_RS06710 PF12951 Passenger-associated-transport-repeat AM356_RS06715 PF13520 Amino acid permease AM356_RS06725 PF07715 TonB-dependent Receptor Plug Domain AM356_RS06725 PF00593 TonB dependent receptor AM356_RS06735 PF00324 Amino acid permease AM356_RS06740 PF03466 LysR substrate binding domain AM356_RS06740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS06745 PF03601 Conserved hypothetical protein 698 AM356_RS06750 PF01261 Xylose isomerase-like TIM barrel AM356_RS06755 PF00293 NUDIX domain AM356_RS06760 PF03222 Tryptophan/tyrosine permease family AM356_RS06765 PF08207 Elongation factor P (EF-P) KOW-like domain AM356_RS06765 PF01132 Elongation factor P (EF-P) OB domain AM356_RS06765 PF09285 Elongation factor P, C-terminal AM356_RS06780 PF01569 PAP2 superfamily AM356_RS06785 PF00877 NlpC/P60 family AM356_RS06795 PF07690 Major Facilitator Superfamily AM356_RS06800 PF01479 S4 domain AM356_RS06800 PF00849 RNA pseudouridylate synthase AM356_RS06805 PF00271 Helicase conserved C-terminal domain AM356_RS06805 PF04851 Type III restriction enzyme, res subunit AM356_RS06810 PF01386 Ribosomal L25p family AM356_RS06815 PF04245 37-kD nucleoid-associated bacterial protein AM356_RS06820 PF07208 Protein of unknown function (DUF1414) AM356_RS06825 PF11893 Domain of unknown function (DUF3413) AM356_RS06825 PF00884 Sulfatase AM356_RS06840 PF00534 Glycosyl transferases group 1 AM356_RS06840 PF13439 Glycosyltransferase Family 4 AM356_RS06920 PF01810 LysE type translocator AM356_RS06935 PF13847 Methyltransferase domain AM356_RS06950 PF03279 Bacterial lipid A biosynthesis acyltransferase AM356_RS06955 PF00313 'Cold-shock' DNA-binding domain AM356_RS06970 PF06445 GyrI-like small molecule binding domain AM356_RS06970 PF12833 Helix-turn-helix domain AM356_RS06975 PF03577 Peptidase family C69 AM356_RS06980 PF00248 Aldo/keto reductase family AM356_RS06985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS06985 PF03466 LysR substrate binding domain AM356_RS06995 PF00226 DnaJ domain AM356_RS06995 PF01556 DnaJ C terminal domain AM356_RS07000 PF09313 Domain of unknown function (DUF1971) AM356_RS07020 PF04358 DsrC like protein AM356_RS07025 PF00708 Acylphosphatase AM356_RS07030 PF08755 Hemimethylated DNA-binding protein YccV like AM356_RS07035 PF13380 CoA binding domain AM356_RS07040 PF02142 MGS-like domain AM356_RS07045 PF13361 UvrD-like helicase C-terminal domain AM356_RS07045 PF00580 UvrD/REP helicase N-terminal domain AM356_RS07045 PF12462 DNA helicase IV / RNA helicase N terminal AM356_RS07050 PF12805 FUSC-like inner membrane protein yccS AM356_RS07055 PF04993 TfoX N-terminal domain AM356_RS07055 PF04994 TfoX C-terminal domain AM356_RS07060 PF03846 Cell division inhibitor SulA AM356_RS07065 PF00691 OmpA family AM356_RS07065 PF01389 OmpA-like transmembrane domain AM356_RS07070 PF06303 MatP N-terminal domain AM356_RS07070 PF17414 MatP C-terminal ribbon-helix-helix domain AM356_RS07075 PF05362 Lon protease (S16) C-terminal proteolytic domain AM356_RS07075 PF13654 AAA domain AM356_RS07080 PF07977 FabA-like domain AM356_RS07085 PF04957 Ribosome modulation factor AM356_RS07095 PF03886 ABC-type transport auxiliary lipoprotein component AM356_RS07100 PF02470 MlaD protein AM356_RS07105 PF04403 Paraquat-inducible protein A AM356_RS07110 PF12848 ABC transporter AM356_RS07110 PF00005 ABC transporter AM356_RS07110 PF16326 ABC transporter C-terminal domain AM356_RS07115 PF10672 S-adenosylmethionine-dependent methyltransferase AM356_RS07115 PF02926 THUMP domain AM356_RS07115 PF01170 Putative RNA methylase family UPF0020 AM356_RS07120 PF00111 2Fe-2S iron-sulfur cluster binding domain AM356_RS07120 PF03473 MOSC domain AM356_RS07120 PF03476 MOSC N-terminal beta barrel domain AM356_RS07125 PF07126 Cell-division protein ZapC AM356_RS07130 PF01180 Dihydroorotate dehydrogenase AM356_RS07140 PF01433 Peptidase family M1 domain AM356_RS07140 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM356_RS07140 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM356_RS07145 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM356_RS07145 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM356_RS07155 PF01336 OB-fold nucleic acid binding domain AM356_RS07155 PF00152 tRNA synthetases class II (D, K and N) AM356_RS07160 PF00267 Gram-negative porin AM356_RS07165 PF00155 Aminotransferase class I and II AM356_RS07230 PF05593 RHS Repeat AM356_RS07230 PF03527 RHS protein AM356_RS07250 PF05593 RHS Repeat AM356_RS07250 PF03527 RHS protein AM356_RS07275 PF04717 Type VI secretion system, phage-baseplate injector AM356_RS07280 PF05638 Type VI secretion system effector, Hcp AM356_RS07290 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM356_RS07320 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AM356_RS07330 PF10431 C-terminal, D2-small domain, of ClpB protein AM356_RS07330 PF07724 AAA domain (Cdc48 subfamily) AM356_RS07330 PF17871 AAA lid domain AM356_RS07330 PF00004 ATPase family associated with various cellular activities (AAA) AM356_RS07350 PF14331 ImcF-related N-terminal domain AM356_RS07350 PF06761 Intracellular multiplication and human macrophage-killing AM356_RS07350 PF06744 Type VI secretion protein IcmF C-terminal AM356_RS07360 PF05947 Type VI secretion system, TssF AM356_RS07365 PF05638 Type VI secretion system effector, Hcp AM356_RS07370 PF00753 Metallo-beta-lactamase superfamily AM356_RS07375 PF05951 Bacterial protein of unknown function (DUF882) AM356_RS07380 PF03734 L,D-transpeptidase catalytic domain AM356_RS07380 PF01471 Putative peptidoglycan binding domain AM356_RS07385 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AM356_RS07390 PF00302 Chloramphenicol acetyltransferase AM356_RS07395 PF16330 MukB hinge domain AM356_RS07395 PF04310 MukB N-terminal AM356_RS07400 PF04288 MukE-like family AM356_RS07405 PF03882 MukF winged-helix domain AM356_RS07405 PF17193 MukF C-terminal domain AM356_RS07405 PF17192 MukF middle domain AM356_RS07410 PF13847 Methyltransferase domain AM356_RS07415 PF02698 DUF218 domain AM356_RS07420 PF02348 Cytidylyltransferase AM356_RS07425 PF03966 Trm112p-like protein AM356_RS07430 PF00313 'Cold-shock' DNA-binding domain AM356_RS07435 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM356_RS07440 PF00005 ABC transporter AM356_RS07440 PF00664 ABC transporter transmembrane region AM356_RS07445 PF03772 Competence protein AM356_RS07445 PF00753 Metallo-beta-lactamase superfamily AM356_RS07450 PF00216 Bacterial DNA-binding protein AM356_RS07455 PF00575 S1 RNA binding domain AM356_RS07460 PF02224 Cytidylate kinase AM356_RS07465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM356_RS07470 PF00266 Aminotransferase class-V AM356_RS07475 PF07690 Major Facilitator Superfamily AM356_RS07480 PF13332 Hemagglutinin repeat AM356_RS07480 PF15526 Novel toxin 21 AM356_RS07480 PF05860 haemagglutination activity domain AM356_RS07480 PF05594 Haemagluttinin repeat AM356_RS07480 PF04829 Pre-toxin domain with VENN motif AM356_RS07485 PF17763 Glutaminase/Asparaginase C-terminal domain AM356_RS07485 PF00710 Asparaginase, N-terminal AM356_RS07490 PF18381 YcaO cyclodehydratase C-terminal domain AM356_RS07490 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AM356_RS07495 PF01226 Formate/nitrite transporter AM356_RS07500 PF02901 Pyruvate formate lyase-like AM356_RS07500 PF01228 Glycine radical AM356_RS07505 PF04055 Radical SAM superfamily AM356_RS07515 PF02615 Malate/L-lactate dehydrogenase AM356_RS07525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM356_RS07525 PF02403 Seryl-tRNA synthetase N-terminal domain AM356_RS07530 PF16193 AAA C-terminal domain AM356_RS07530 PF12002 MgsA AAA+ ATPase C terminal AM356_RS07530 PF00004 ATPase family associated with various cellular activities (AAA) AM356_RS07535 PF03548 Outer membrane lipoprotein carrier protein LolA AM356_RS07540 PF01580 FtsK/SpoIIIE family AM356_RS07540 PF09397 Ftsk gamma domain AM356_RS07540 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM356_RS07540 PF17854 FtsK alpha domain AM356_RS07545 PF01037 Lrp/AsnC ligand binding domain AM356_RS07550 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM356_RS07555 PF00005 ABC transporter AM356_RS07555 PF00664 ABC transporter transmembrane region AM356_RS07560 PF00005 ABC transporter AM356_RS07560 PF00664 ABC transporter transmembrane region AM356_RS07565 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM356_RS07570 PF01176 Translation initiation factor 1A / IF-1 AM356_RS07575 PF10431 C-terminal, D2-small domain, of ClpB protein AM356_RS07575 PF02861 Clp amino terminal domain, pathogenicity island component AM356_RS07575 PF17871 AAA lid domain AM356_RS07575 PF07724 AAA domain (Cdc48 subfamily) AM356_RS07575 PF00004 ATPase family associated with various cellular activities (AAA) AM356_RS07580 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM356_RS07585 PF00313 'Cold-shock' DNA-binding domain AM356_RS07590 PF00005 ABC transporter AM356_RS07590 PF02687 FtsX-like permease family AM356_RS07590 PF12704 MacB-like periplasmic core domain AM356_RS07595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM356_RS07600 PF11398 Protein of unknown function (DUF2813) AM356_RS07605 PF03956 Lysine exporter LysO AM356_RS07610 PF13460 NAD(P)H-binding AM356_RS07610 PF11066 Protein of unknown function (DUF2867) AM356_RS07615 PF00005 ABC transporter AM356_RS07620 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM356_RS07625 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS07630 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS07635 PF05958 tRNA (Uracil-5-)-methyltransferase AM356_RS07640 PF10722 Putative bacterial sensory transduction regulator AM356_RS07645 PF07214 Protein of unknown function (DUF1418) AM356_RS07650 PF00462 Glutaredoxin AM356_RS07655 PF01894 Uncharacterised protein family UPF0047 AM356_RS07660 PF01569 PAP2 superfamily AM356_RS07670 PF03313 Serine dehydratase alpha chain AM356_RS07670 PF03315 Serine dehydratase beta chain AM356_RS07675 PF01268 Formate--tetrahydrofolate ligase AM356_RS07680 PF00768 D-alanyl-D-alanine carboxypeptidase AM356_RS07680 PF07943 Penicillin-binding protein 5, C-terminal domain AM356_RS07685 PF13417 Glutathione S-transferase, N-terminal domain AM356_RS07685 PF00043 Glutathione S-transferase, C-terminal domain AM356_RS07690 PF01370 NAD dependent epimerase/dehydratase family AM356_RS07695 PF08029 HisG, C-terminal domain AM356_RS07695 PF01634 ATP phosphoribosyltransferase AM356_RS07700 PF00815 Histidinol dehydrogenase AM356_RS07705 PF00155 Aminotransferase class I and II AM356_RS07710 PF00475 Imidazoleglycerol-phosphate dehydratase AM356_RS07715 PF00117 Glutamine amidotransferase class-I AM356_RS07720 PF00977 Histidine biosynthesis protein AM356_RS07725 PF00977 Histidine biosynthesis protein AM356_RS07730 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM356_RS07730 PF01502 Phosphoribosyl-AMP cyclohydrolase AM356_RS07735 PF00465 Iron-containing alcohol dehydrogenase AM356_RS07740 PF04073 Aminoacyl-tRNA editing domain AM356_RS07745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM356_RS07745 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AM356_RS07750 PF03471 Transporter associated domain AM356_RS07750 PF00571 CBS domain AM356_RS07750 PF03741 Integral membrane protein TerC family AM356_RS07755 PF03606 C4-dicarboxylate anaerobic carrier AM356_RS07760 PF05170 AsmA family AM356_RS07765 PF00692 dUTPase AM356_RS07770 PF00485 Phosphoribulokinase / Uridine kinase family AM356_RS07775 PF10609 NUBPL iron-transfer P-loop NTPase AM356_RS07780 PF01588 Putative tRNA binding domain AM356_RS07780 PF09334 tRNA synthetases class I (M) AM356_RS07785 PF03788 LrgA family AM356_RS07790 PF04172 LrgB-like family AM356_RS07795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM356_RS07795 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AM356_RS07800 PF03949 Malic enzyme, NAD binding domain AM356_RS07800 PF00390 Malic enzyme, N-terminal domain AM356_RS07805 PF02698 DUF218 domain AM356_RS07810 PF04235 Protein of unknown function (DUF418) AM356_RS07815 PF01227 GTP cyclohydrolase I AM356_RS07820 PF06779 Uncharacterised MFS-type transporter YbfB AM356_RS07825 PF03453 MoeA N-terminal region (domain I and II) AM356_RS07825 PF03454 MoeA C-terminal region (domain IV) AM356_RS07825 PF00994 Probable molybdopterin binding domain AM356_RS07830 PF00899 ThiF family AM356_RS07835 PF07969 Amidohydrolase family AM356_RS07845 PF03641 Possible lysine decarboxylase AM356_RS07850 PF00892 EamA-like transporter family AM356_RS07855 PF00210 Ferritin-like domain AM356_RS07860 PF13307 Helicase C-terminal domain AM356_RS07860 PF06733 DEAD_2 AM356_RS07865 PF03466 LysR substrate binding domain AM356_RS07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS07870 PF03972 MmgE/PrpD family AM356_RS07875 PF10397 Adenylosuccinate lyase C-terminus AM356_RS07875 PF00206 Lyase AM356_RS07880 PF01053 Cys/Met metabolism PLP-dependent enzyme AM356_RS07885 PF03606 C4-dicarboxylate anaerobic carrier AM356_RS07895 PF00581 Rhodanese-like domain AM356_RS07900 PF04226 Transglycosylase associated protein AM356_RS07905 PF01207 Dihydrouridine synthase (Dus) AM356_RS07910 PF00271 Helicase conserved C-terminal domain AM356_RS07910 PF00270 DEAD/DEAH box helicase AM356_RS07915 PF00440 Bacterial regulatory proteins, tetR family AM356_RS07915 PF09209 Tetracyclin repressor-like, C-terminal domain AM356_RS07920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM356_RS07925 PF00005 ABC transporter AM356_RS07940 PF01027 Inhibitor of apoptosis-promoting Bax1 AM356_RS07945 PF02391 MoaE protein AM356_RS07950 PF02597 ThiS family AM356_RS07955 PF01967 MoaC family AM356_RS07960 PF06463 Molybdenum Cofactor Synthesis C AM356_RS07960 PF04055 Radical SAM superfamily AM356_RS07965 PF01933 Uncharacterised protein family UPF0052 AM356_RS07975 PF12344 Ultra-violet resistance protein B AM356_RS07975 PF00271 Helicase conserved C-terminal domain AM356_RS07975 PF04851 Type III restriction enzyme, res subunit AM356_RS07975 PF17757 UvrB interaction domain AM356_RS07975 PF02151 UvrB/uvrC motif AM356_RS07985 PF08241 Methyltransferase domain AM356_RS07990 PF00155 Aminotransferase class I and II AM356_RS07995 PF06968 Biotin and Thiamin Synthesis associated domain AM356_RS07995 PF04055 Radical SAM superfamily AM356_RS08000 PF00202 Aminotransferase class-III AM356_RS08005 PF10282 Lactonase, 7-bladed beta-propeller AM356_RS08015 PF00005 ABC transporter AM356_RS08015 PF03459 TOBE domain AM356_RS08020 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS08030 PF10766 Multidrug efflux pump-associated protein AcrZ AM356_RS08035 PF03459 TOBE domain AM356_RS08035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS08070 PF00005 ABC transporter AM356_RS08075 PF00300 Histidine phosphatase superfamily (branch 1) AM356_RS08080 PF00793 DAHP synthetase I family AM356_RS08085 PF04973 Nicotinamide mononucleotide transporter AM356_RS08105 PF16331 TolA binding protein trimerisation AM356_RS08105 PF13174 Tetratricopeptide repeat AM356_RS08110 PF00691 OmpA family AM356_RS08115 PF04052 TolB amino-terminal domain AM356_RS08115 PF07676 WD40-like Beta Propeller Repeat AM356_RS08120 PF06519 TolA C-terminal AM356_RS08125 PF02472 Biopolymer transport protein ExbD/TolR AM356_RS08130 PF01618 MotA/TolQ/ExbB proton channel family AM356_RS08135 PF03061 Thioesterase superfamily AM356_RS08145 PF07690 Major Facilitator Superfamily AM356_RS08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS08150 PF03466 LysR substrate binding domain AM356_RS08155 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AM356_RS08160 PF08173 Membrane bound YbgT-like protein AM356_RS08165 PF02322 Cytochrome bd terminal oxidase subunit II AM356_RS08170 PF01654 Cytochrome bd terminal oxidase subunit I AM356_RS08175 PF02629 CoA binding domain AM356_RS08175 PF00549 CoA-ligase AM356_RS08180 PF08442 ATP-grasp domain AM356_RS08180 PF00549 CoA-ligase AM356_RS08185 PF02817 e3 binding domain AM356_RS08185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM356_RS08185 PF00364 Biotin-requiring enzyme AM356_RS08190 PF16078 2-oxoglutarate dehydrogenase N-terminus AM356_RS08190 PF00676 Dehydrogenase E1 component AM356_RS08190 PF16870 2-oxoglutarate dehydrogenase C-terminal AM356_RS08190 PF02779 Transketolase, pyrimidine binding domain AM356_RS08195 PF13085 2Fe-2S iron-sulfur cluster binding domain AM356_RS08200 PF02910 Fumarate reductase flavoprotein C-term AM356_RS08200 PF00890 FAD binding domain AM356_RS08205 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM356_RS08210 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM356_RS08215 PF00285 Citrate synthase, C-terminal domain AM356_RS08225 PF07690 Major Facilitator Superfamily AM356_RS08235 PF07728 AAA domain (dynein-related subfamily) AM356_RS08245 PF05762 VWA domain containing CoxE-like protein AM356_RS08255 PF01784 NIF3 (NGG1p interacting factor 3) AM356_RS08260 PF10725 Protein of unknown function (DUF2517) AM356_RS08270 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AM356_RS08275 PF07308 Protein of unknown function (DUF1456) AM356_RS08280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM356_RS08280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM356_RS08280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM356_RS08280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM356_RS08285 PF17206 SeqA protein N-terminal domain AM356_RS08285 PF03925 SeqA protein C-terminal domain AM356_RS08290 PF12697 Alpha/beta hydrolase family AM356_RS08295 PF01402 Ribbon-helix-helix protein, copG family AM356_RS08300 PF00258 Flavodoxin AM356_RS08305 PF01475 Ferric uptake regulator family AM356_RS08315 PF03573 outer membrane porin, OprD family AM356_RS08320 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM356_RS08320 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM356_RS08325 PF06440 DNA polymerase III, theta subunit AM356_RS08330 PF16970 Type-1 fimbrial protein, A AM356_RS08335 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS08335 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS08340 PF13953 PapC C-terminal domain AM356_RS08340 PF00577 Outer membrane usher protein AM356_RS08340 PF13954 PapC N-terminal domain AM356_RS08430 PF13614 AAA domain AM356_RS08505 PF02368 Bacterial Ig-like domain (group 2) AM356_RS08505 PF02369 Bacterial Ig-like domain (group 1) AM356_RS08505 PF01476 LysM domain AM356_RS08505 PF07979 Intimin C-type lectin domain AM356_RS08505 PF11924 Inverse autotransporter, beta-domain AM356_RS08555 PF00959 Phage lysozyme AM356_RS08570 PF07274 Protein of unknown function (DUF1440) AM356_RS08585 PF07102 Protein of unknown function (DUF1364) AM356_RS08595 PF03796 DnaB-like helicase C terminal domain AM356_RS08595 PF00772 DnaB-like helicase N terminal domain AM356_RS08615 PF01381 Helix-turn-helix AM356_RS08615 PF00717 Peptidase S24-like AM356_RS08675 PF00436 Single-strand binding protein family AM356_RS08715 PF00589 Phage integrase family AM356_RS08715 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain AM356_RS08720 PF02378 Phosphotransferase system, EIIC AM356_RS08720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM356_RS08720 PF00367 phosphotransferase system, EIIB AM356_RS08725 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM356_RS08730 PF01979 Amidohydrolase family AM356_RS08735 PF00480 ROK family AM356_RS08735 PF01047 MarR family AM356_RS08775 PF02583 Metal-sensitive transcriptional repressor AM356_RS08780 PF00107 Zinc-binding dehydrogenase AM356_RS08780 PF08240 Alcohol dehydrogenase GroES-like domain AM356_RS08785 PF00756 Putative esterase AM356_RS08790 PF01494 FAD binding domain AM356_RS08795 PF04055 Radical SAM superfamily AM356_RS08795 PF01938 TRAM domain AM356_RS08795 PF00919 Uncharacterized protein family UPF0004 AM356_RS08800 PF02562 PhoH-like protein AM356_RS08805 PF02130 Uncharacterized protein family UPF0054 AM356_RS08810 PF03471 Transporter associated domain AM356_RS08810 PF00571 CBS domain AM356_RS08815 PF00795 Carbon-nitrogen hydrolase AM356_RS08825 PF00578 AhpC/TSA family AM356_RS08845 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM356_RS08850 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS08855 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS08860 PF00005 ABC transporter AM356_RS08865 PF08264 Anticodon-binding domain of tRNA AM356_RS08865 PF13603 Leucyl-tRNA synthetase, Domain 2 AM356_RS08865 PF00133 tRNA synthetases class I (I, L, M and V) AM356_RS08870 PF04390 Lipopolysaccharide-assembly AM356_RS08875 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AM356_RS08875 PF06144 DNA polymerase III, delta subunit AM356_RS08880 PF01467 Cytidylyltransferase-like AM356_RS08895 PF02590 Predicted SPOUT methyltransferase AM356_RS08900 PF00905 Penicillin binding protein transpeptidase domain AM356_RS08900 PF03717 Penicillin-binding Protein dimerisation domain AM356_RS08905 PF01098 Cell cycle protein AM356_RS08910 PF03330 Lytic transglycolase AM356_RS08910 PF05036 Sporulation related domain AM356_RS08915 PF00768 D-alanyl-D-alanine carboxypeptidase AM356_RS08915 PF07943 Penicillin-binding protein 5, C-terminal domain AM356_RS08920 PF04359 Protein of unknown function (DUF493) AM356_RS08930 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM356_RS08930 PF04055 Radical SAM superfamily AM356_RS08935 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM356_RS08945 PF00313 'Cold-shock' DNA-binding domain AM356_RS08950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM356_RS08950 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM356_RS08960 PF07972 NrdI Flavodoxin like AM356_RS08965 PF02867 Ribonucleotide reductase, barrel domain AM356_RS08965 PF08343 Ribonucleotide reductase N-terminal AM356_RS08965 PF00317 Ribonucleotide reductase, all-alpha domain AM356_RS08970 PF00268 Ribonucleotide reductase, small chain AM356_RS08975 PF00005 ABC transporter AM356_RS08975 PF00571 CBS domain AM356_RS08980 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS08985 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM356_RS08990 PF00593 TonB dependent receptor AM356_RS08990 PF07715 TonB-dependent Receptor Plug Domain AM356_RS08995 PF07690 Major Facilitator Superfamily AM356_RS09000 PF01047 MarR family AM356_RS09005 PF00857 Isochorismatase family AM356_RS09010 PF07690 Major Facilitator Superfamily AM356_RS09015 PF07729 FCD domain AM356_RS09015 PF00392 Bacterial regulatory proteins, gntR family AM356_RS09020 PF00529 HlyD membrane-fusion protein of T1SS AM356_RS09020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM356_RS09025 PF07690 Major Facilitator Superfamily AM356_RS09030 PF00588 SpoU rRNA Methylase family AM356_RS09030 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM356_RS09040 PF03942 DTW domain AM356_RS09045 PF00583 Acetyltransferase (GNAT) family AM356_RS09045 PF13380 CoA binding domain AM356_RS09045 PF13607 Succinyl-CoA ligase like flavodoxin domain AM356_RS09050 PF13091 PLD-like domain AM356_RS09055 PF10043 Predicted periplasmic lipoprotein (DUF2279) AM356_RS09085 PF10431 C-terminal, D2-small domain, of ClpB protein AM356_RS09085 PF02861 Clp amino terminal domain, pathogenicity island component AM356_RS09085 PF00004 ATPase family associated with various cellular activities (AAA) AM356_RS09085 PF17871 AAA lid domain AM356_RS09085 PF07724 AAA domain (Cdc48 subfamily) AM356_RS09090 PF02578 Multi-copper polyphenol oxidoreductase laccase AM356_RS09095 PF01479 S4 domain AM356_RS09095 PF00849 RNA pseudouridylate synthase AM356_RS09100 PF13525 Outer membrane lipoprotein AM356_RS09105 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM356_RS09110 PF00800 Prephenate dehydratase AM356_RS09110 PF01817 Chorismate mutase type II AM356_RS09115 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM356_RS09120 PF01817 Chorismate mutase type II AM356_RS09120 PF02153 Prephenate dehydrogenase AM356_RS09125 PF00793 DAHP synthetase I family AM356_RS09130 PF01245 Ribosomal protein L19 AM356_RS09135 PF01746 tRNA (Guanine-1)-methyltransferase AM356_RS09140 PF01782 RimM N-terminal domain AM356_RS09140 PF05239 PRC-barrel domain AM356_RS09145 PF00886 Ribosomal protein S16 AM356_RS09150 PF02881 SRP54-type protein, helical bundle domain AM356_RS09150 PF00448 SRP54-type protein, GTPase domain AM356_RS09150 PF02978 Signal peptide binding domain AM356_RS09155 PF01578 Cytochrome C assembly protein AM356_RS09160 PF00571 CBS domain AM356_RS09160 PF01595 Cyclin M transmembrane N-terminal domain AM356_RS09160 PF03471 Transporter associated domain AM356_RS09165 PF02664 S-Ribosylhomocysteinase (LuxS) AM356_RS09170 PF04262 Glutamate-cysteine ligase AM356_RS09200 PF02599 Global regulator protein family AM356_RS09205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM356_RS09205 PF02272 DHHA1 domain AM356_RS09205 PF01411 tRNA synthetases class II (A) AM356_RS09210 PF00154 recA bacterial DNA recombination protein AM356_RS09215 PF02464 Competence-damaged protein AM356_RS09220 PF07690 Major Facilitator Superfamily AM356_RS09225 PF13193 AMP-binding enzyme C-terminal domain AM356_RS09225 PF00501 AMP-binding enzyme AM356_RS09225 PF01553 Acyltransferase AM356_RS09230 PF01202 Shikimate kinase AM356_RS09235 PF00171 Aldehyde dehydrogenase family AM356_RS09240 PF01472 PUA domain AM356_RS09240 PF00696 Amino acid kinase family AM356_RS09245 PF07417 Sigma factor-binding transcriptional regulator Crl AM356_RS09250 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AM356_RS09255 PF00156 Phosphoribosyl transferase domain AM356_RS09260 PF07687 Peptidase dimerisation domain AM356_RS09260 PF01546 Peptidase family M20/M25/M40 AM356_RS09265 PF07715 TonB-dependent Receptor Plug Domain AM356_RS09265 PF00593 TonB dependent receptor AM356_RS09270 PF11798 IMS family HHH motif AM356_RS09270 PF00817 impB/mucB/samB family AM356_RS09270 PF11799 impB/mucB/samB family C-terminal domain AM356_RS09275 PF03009 Glycerophosphoryl diester phosphodiesterase family AM356_RS09285 PF04400 (Na+)-NQR maturation NqrM AM356_RS09290 PF02424 ApbE family AM356_RS09295 PF00970 Oxidoreductase FAD-binding domain AM356_RS09295 PF00111 2Fe-2S iron-sulfur cluster binding domain AM356_RS09295 PF00175 Oxidoreductase NAD-binding domain AM356_RS09300 PF02508 Rnf-Nqr subunit, membrane protein AM356_RS09305 PF02508 Rnf-Nqr subunit, membrane protein AM356_RS09310 PF04205 FMN-binding domain AM356_RS09315 PF03116 NQR2, RnfD, RnfE family AM356_RS09320 PF11973 NQRA C-terminal domain AM356_RS09320 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AM356_RS09325 PF03734 L,D-transpeptidase catalytic domain AM356_RS09330 PF13230 Glutamine amidotransferases class-II AM356_RS09335 PF13580 SIS domain AM356_RS09340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM356_RS09340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM356_RS09340 PF09317 Domain of unknown function (DUF1974) AM356_RS09345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM356_RS09345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM356_RS09350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS09350 PF03466 LysR substrate binding domain AM356_RS09355 PF03466 LysR substrate binding domain AM356_RS09355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS09375 PF04452 RNA methyltransferase AM356_RS09380 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM356_RS09380 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM356_RS09385 PF02622 Uncharacterized ACR, COG1678 AM356_RS09390 PF03652 Holliday junction resolvase AM356_RS09395 PF00437 Type II/IV secretion system protein AM356_RS09400 PF01168 Alanine racemase, N-terminal domain AM356_RS09405 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM356_RS09405 PF03807 NADP oxidoreductase coenzyme F420-dependent AM356_RS09410 PF02325 YGGT family AM356_RS09415 PF01725 Ham1 family AM356_RS09420 PF06969 HemN C-terminal domain AM356_RS09420 PF04055 Radical SAM superfamily AM356_RS09425 PF01497 Periplasmic binding protein AM356_RS09430 PF11101 Protein of unknown function (DUF2884) AM356_RS09435 PF04960 Glutaminase AM356_RS09440 PF04320 Protein with unknown function (DUF469) AM356_RS09445 PF02390 Putative methyltransferase AM356_RS09450 PF00730 HhH-GPD superfamily base excision DNA repair protein AM356_RS09450 PF00633 Helix-hairpin-helix motif AM356_RS09450 PF14815 NUDIX domain AM356_RS09450 PF10576 Iron-sulfur binding domain of endonuclease III AM356_RS09455 PF04362 Bacterial Fe(2+) trafficking AM356_RS09460 PF01464 Transglycosylase SLT domain AM356_RS09460 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AM356_RS09470 PF00589 Phage integrase family AM356_RS09470 PF02899 Phage integrase, N-terminal SAM-like domain AM356_RS09690 PF00593 TonB dependent receptor AM356_RS09690 PF07715 TonB-dependent Receptor Plug Domain AM356_RS09695 PF07690 Major Facilitator Superfamily AM356_RS09705 PF00501 AMP-binding enzyme AM356_RS09705 PF00668 Condensation domain AM356_RS09705 PF08242 Methyltransferase domain AM356_RS09705 PF00550 Phosphopantetheine attachment site AM356_RS09710 PF00109 Beta-ketoacyl synthase, N-terminal domain AM356_RS09710 PF02801 Beta-ketoacyl synthase, C-terminal domain AM356_RS09710 PF00668 Condensation domain AM356_RS09710 PF16197 Ketoacyl-synthetase C-terminal extension AM356_RS09710 PF00550 Phosphopantetheine attachment site AM356_RS09710 PF00698 Acyl transferase domain AM356_RS09720 PF00975 Thioesterase domain AM356_RS09725 PF00005 ABC transporter AM356_RS09725 PF04954 Siderophore-interacting protein AM356_RS09725 PF00664 ABC transporter transmembrane region AM356_RS09725 PF08021 Siderophore-interacting FAD-binding domain AM356_RS09730 PF00664 ABC transporter transmembrane region AM356_RS09730 PF00005 ABC transporter AM356_RS09735 PF01648 4'-phosphopantetheinyl transferase superfamily AM356_RS09775 PF00593 TonB dependent receptor AM356_RS09775 PF07715 TonB-dependent Receptor Plug Domain AM356_RS09790 PF04224 Protein of unknown function, DUF417 AM356_RS09805 PF16970 Type-1 fimbrial protein, A AM356_RS09815 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM356_RS09815 PF01276 Orn/Lys/Arg decarboxylase, major domain AM356_RS09815 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM356_RS09830 PF04754 Putative transposase, YhgA-like AM356_RS09850 PF01131 DNA topoisomerase AM356_RS09850 PF01751 Toprim domain AM356_RS09895 PF03796 DnaB-like helicase C terminal domain AM356_RS09895 PF00772 DnaB-like helicase N terminal domain AM356_RS09905 PF13614 AAA domain AM356_RS09930 PF10940 Protein of unknown function (DUF2618) AM356_RS09935 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM356_RS09935 PF01276 Orn/Lys/Arg decarboxylase, major domain AM356_RS09935 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM356_RS09940 PF13520 Amino acid permease AM356_RS09945 PF16925 Tetracyclin repressor-like, C-terminal domain AM356_RS09945 PF00440 Bacterial regulatory proteins, tetR family AM356_RS09955 PF00664 ABC transporter transmembrane region AM356_RS09955 PF03412 Peptidase C39 family AM356_RS09955 PF00005 ABC transporter AM356_RS09975 PF12833 Helix-turn-helix domain AM356_RS09980 PF12833 Helix-turn-helix domain AM356_RS10005 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS10005 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS10010 PF00577 Outer membrane usher protein AM356_RS10010 PF13954 PapC N-terminal domain AM356_RS10010 PF13953 PapC C-terminal domain AM356_RS10020 PF00419 Fimbrial protein AM356_RS10025 PF01381 Helix-turn-helix AM356_RS10040 PF00356 Bacterial regulatory proteins, lacI family AM356_RS10045 PF00367 phosphotransferase system, EIIB AM356_RS10045 PF02378 Phosphotransferase system, EIIC AM356_RS10050 PF03636 Glycosyl hydrolase family 65, N-terminal domain AM356_RS10050 PF03632 Glycosyl hydrolase family 65 central catalytic domain AM356_RS10050 PF03633 Glycosyl hydrolase family 65, C-terminal domain AM356_RS10055 PF13419 Haloacid dehalogenase-like hydrolase AM356_RS10065 PF01546 Peptidase family M20/M25/M40 AM356_RS10065 PF07687 Peptidase dimerisation domain AM356_RS10075 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM356_RS10075 PF00413 Matrixin AM356_RS10075 PF08548 Peptidase M10 serralysin C terminal AM356_RS10080 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM356_RS10080 PF00413 Matrixin AM356_RS10080 PF08548 Peptidase M10 serralysin C terminal AM356_RS10085 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM356_RS10085 PF08548 Peptidase M10 serralysin C terminal AM356_RS10085 PF00413 Matrixin AM356_RS10090 PF08548 Peptidase M10 serralysin C terminal AM356_RS10090 PF00413 Matrixin AM356_RS10090 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM356_RS10095 PF00664 ABC transporter transmembrane region AM356_RS10095 PF00005 ABC transporter AM356_RS10100 PF00529 HlyD membrane-fusion protein of T1SS AM356_RS10105 PF02321 Outer membrane efflux protein AM356_RS10110 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM356_RS10115 PF02627 Carboxymuconolactone decarboxylase family AM356_RS10120 PF09350 Domain of unknown function (DUF1992) AM356_RS10125 PF03806 AbgT putative transporter family AM356_RS10140 PF00419 Fimbrial protein AM356_RS10150 PF00419 Fimbrial protein AM356_RS10155 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS10155 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS10160 PF13953 PapC C-terminal domain AM356_RS10160 PF13954 PapC N-terminal domain AM356_RS10160 PF00577 Outer membrane usher protein AM356_RS10170 PF00419 Fimbrial protein AM356_RS10175 PF00589 Phage integrase family AM356_RS10195 PF00419 Fimbrial protein AM356_RS10200 PF00419 Fimbrial protein AM356_RS10205 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS10205 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS10210 PF00577 Outer membrane usher protein AM356_RS10210 PF13954 PapC N-terminal domain AM356_RS10210 PF13953 PapC C-terminal domain AM356_RS10215 PF00419 Fimbrial protein AM356_RS10220 PF00753 Metallo-beta-lactamase superfamily AM356_RS10220 PF12706 Beta-lactamase superfamily domain AM356_RS10235 PF02028 BCCT, betaine/carnitine/choline family transporter AM356_RS10240 PF01047 MarR family AM356_RS10250 PF01613 Flavin reductase like domain AM356_RS10255 PF00854 POT family AM356_RS10260 PF05154 TM2 domain AM356_RS10265 PF01116 Fructose-bisphosphate aldolase class-II AM356_RS10270 PF00162 Phosphoglycerate kinase AM356_RS10275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM356_RS10275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM356_RS10280 PF00456 Transketolase, thiamine diphosphate binding domain AM356_RS10280 PF02780 Transketolase, C-terminal domain AM356_RS10280 PF02779 Transketolase, pyrimidine binding domain AM356_RS10295 PF07690 Major Facilitator Superfamily AM356_RS10305 PF00291 Pyridoxal-phosphate dependent enzyme AM356_RS10310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM356_RS10315 PF00593 TonB dependent receptor AM356_RS10315 PF07715 TonB-dependent Receptor Plug Domain AM356_RS10320 PF04183 IucA / IucC family AM356_RS10320 PF06276 Ferric iron reductase FhuF-like transporter AM356_RS10330 PF00005 ABC transporter AM356_RS10335 PF01032 FecCD transport family AM356_RS10370 PF00929 Exonuclease AM356_RS10375 PF00075 RNase H AM356_RS10380 PF08241 Methyltransferase domain AM356_RS10385 PF00753 Metallo-beta-lactamase superfamily AM356_RS10385 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM356_RS10390 PF01464 Transglycosylase SLT domain AM356_RS10390 PF01476 LysM domain AM356_RS10400 PF00939 Sodium:sulfate symporter transmembrane region AM356_RS10405 PF03952 Enolase, N-terminal domain AM356_RS10405 PF00113 Enolase, C-terminal TIM barrel domain AM356_RS10410 PF00117 Glutamine amidotransferase class-I AM356_RS10410 PF06418 CTP synthase N-terminus AM356_RS10420 PF03819 MazG nucleotide pyrophosphohydrolase domain AM356_RS10425 PF02824 TGS domain AM356_RS10425 PF04607 Region found in RelA / SpoT proteins AM356_RS10425 PF13291 ACT domain AM356_RS10430 PF05958 tRNA (Uracil-5-)-methyltransferase AM356_RS10430 PF01938 TRAM domain AM356_RS10435 PF01966 HD domain AM356_RS10435 PF13286 Phosphohydrolase-associated domain AM356_RS10440 PF01048 Phosphorylase superfamily AM356_RS10445 PF01497 Periplasmic binding protein AM356_RS10450 PF01521 Iron-sulphur cluster biosynthesis AM356_RS10455 PF00202 Aminotransferase class-III AM356_RS10460 PF14814 Bifunctional transglycosylase second domain AM356_RS10460 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AM356_RS10460 PF00905 Penicillin binding protein transpeptidase domain AM356_RS10460 PF00912 Transglycosylase AM356_RS10465 PF00270 DEAD/DEAH box helicase AM356_RS10465 PF08482 ATP-dependent helicase C-terminal AM356_RS10465 PF00271 Helicase conserved C-terminal domain AM356_RS10465 PF04408 Helicase associated domain (HA2) AM356_RS10470 PF17746 SfsA N-terminal OB domain AM356_RS10470 PF03749 Sugar fermentation stimulation protein RE domain AM356_RS10475 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM356_RS10485 PF12627 Probable RNA and SrmB- binding site of polymerase A AM356_RS10485 PF12626 Polymerase A arginine-rich C-terminus AM356_RS10485 PF01743 Poly A polymerase head domain AM356_RS10490 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM356_RS10495 PF02548 Ketopantoate hydroxymethyltransferase AM356_RS10500 PF02569 Pantoate-beta-alanine ligase AM356_RS10505 PF02261 Aspartate decarboxylase AM356_RS10510 PF00196 Bacterial regulatory proteins, luxR family AM356_RS10510 PF00072 Response regulator receiver domain AM356_RS10515 PF05231 MASE1 AM356_RS10515 PF07730 Histidine kinase AM356_RS10515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS10520 PF07690 Major Facilitator Superfamily AM356_RS10530 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS10535 PF08402 TOBE domain AM356_RS10535 PF00005 ABC transporter AM356_RS10540 PF00291 Pyridoxal-phosphate dependent enzyme AM356_RS10545 PF02447 GntP family permease AM356_RS10550 PF03466 LysR substrate binding domain AM356_RS10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS10555 PF03738 Glutathionylspermidine synthase preATP-grasp AM356_RS10555 PF05257 CHAP domain AM356_RS10570 PF05638 Type VI secretion system effector, Hcp AM356_RS10575 PF01527 Transposase AM356_RS10580 PF10634 Fe2+ transport protein AM356_RS10585 PF13473 Cupredoxin-like domain AM356_RS10600 PF04261 Dyp-type peroxidase family AM356_RS10610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM356_RS10610 PF00384 Molybdopterin oxidoreductase AM356_RS10610 PF01568 Molydopterin dinucleotide binding domain AM356_RS10615 PF13247 4Fe-4S dicluster domain AM356_RS10615 PF12800 4Fe-4S binding domain AM356_RS10630 PF01435 Peptidase family M48 AM356_RS10635 PF10735 Protein of unknown function (DUF2526) AM356_RS10640 PF07690 Major Facilitator Superfamily AM356_RS10645 PF01061 ABC-2 type transporter AM356_RS10650 PF00005 ABC transporter AM356_RS10655 PF00484 Carbonic anhydrase AM356_RS10660 PF00156 Phosphoribosyl transferase domain AM356_RS10665 PF10518 TAT (twin-arginine translocation) pathway signal sequence AM356_RS10665 PF07732 Multicopper oxidase AM356_RS10665 PF07731 Multicopper oxidase AM356_RS10665 PF00394 Multicopper oxidase AM356_RS10670 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AM356_RS10705 PF09370 Phosphoenolpyruvate hydrolase-like AM356_RS10710 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM356_RS10710 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain AM356_RS10715 PF01554 MatE AM356_RS10725 PF01546 Peptidase family M20/M25/M40 AM356_RS10725 PF07687 Peptidase dimerisation domain AM356_RS10730 PF03606 C4-dicarboxylate anaerobic carrier AM356_RS10735 PF03313 Serine dehydratase alpha chain AM356_RS10740 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM356_RS10740 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM356_RS10745 PF04328 Selenoprotein, putative AM356_RS10750 PF13722 5TM C-terminal transporter carbon starvation CstA AM356_RS10750 PF02554 Carbon starvation protein CstA AM356_RS10755 PF02132 RecR protein AM356_RS10755 PF13662 Toprim domain AM356_RS10760 PF02575 YbaB/EbfC DNA-binding family AM356_RS10765 PF12170 DNA polymerase III tau subunit V interacting with alpha AM356_RS10765 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM356_RS10765 PF12169 DNA polymerase III subunits gamma and tau domain III AM356_RS10770 PF00156 Phosphoribosyl transferase domain AM356_RS10785 PF12795 Mechanosensitive ion channel porin domain AM356_RS10785 PF00924 Mechanosensitive ion channel AM356_RS10785 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM356_RS10790 PF02635 DsrE/DsrF-like family AM356_RS10795 PF00440 Bacterial regulatory proteins, tetR family AM356_RS10795 PF08361 MAATS-type transcriptional repressor, C-terminal region AM356_RS10800 PF00529 HlyD membrane-fusion protein of T1SS AM356_RS10800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM356_RS10805 PF00873 AcrB/AcrD/AcrF family AM356_RS10815 PF05321 Haemolysin expression modulating protein AM356_RS10830 PF00909 Ammonium Transporter Family AM356_RS10835 PF00543 Nitrogen regulatory protein P-II AM356_RS10840 PF00005 ABC transporter AM356_RS10840 PF00664 ABC transporter transmembrane region AM356_RS10845 PF00005 ABC transporter AM356_RS10845 PF00664 ABC transporter transmembrane region AM356_RS10850 PF01037 Lrp/AsnC ligand binding domain AM356_RS10850 PF13404 AsnC-type helix-turn-helix domain AM356_RS10855 PF06508 Queuosine biosynthesis protein QueC AM356_RS10865 PF10531 SLBB domain AM356_RS10870 PF13145 PPIC-type PPIASE domain AM356_RS10875 PF00216 Bacterial DNA-binding protein AM356_RS10880 PF00004 ATPase family associated with various cellular activities (AAA) AM356_RS10880 PF05362 Lon protease (S16) C-terminal proteolytic domain AM356_RS10880 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM356_RS10885 PF10431 C-terminal, D2-small domain, of ClpB protein AM356_RS10885 PF07724 AAA domain (Cdc48 subfamily) AM356_RS10885 PF06689 ClpX C4-type zinc finger AM356_RS10890 PF00574 Clp protease AM356_RS10895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM356_RS10895 PF05697 Bacterial trigger factor protein (TF) AM356_RS10895 PF05698 Bacterial trigger factor protein (TF) C-terminus AM356_RS10900 PF01722 BolA-like protein AM356_RS10905 PF03923 Uncharacterized lipoprotein AM356_RS10905 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM356_RS10910 PF07690 Major Facilitator Superfamily AM356_RS10915 PF00270 DEAD/DEAH box helicase AM356_RS10915 PF03880 DbpA RNA binding domain AM356_RS10915 PF00271 Helicase conserved C-terminal domain AM356_RS10920 PF03502 Nucleoside-specific channel-forming protein, Tsx AM356_RS10925 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM356_RS10925 PF06481 COX Aromatic Rich Motif AM356_RS10930 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM356_RS10935 PF00510 Cytochrome c oxidase subunit III AM356_RS10940 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM356_RS10945 PF01040 UbiA prenyltransferase family AM356_RS10950 PF07690 Major Facilitator Superfamily AM356_RS10955 PF04461 Protein of unknown function (DUF520) AM356_RS10960 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM356_RS10960 PF02558 Ketopantoate reductase PanE/ApbA AM356_RS10965 PF01965 DJ-1/PfpI family AM356_RS10970 PF02568 Thiamine biosynthesis protein (ThiI) AM356_RS10970 PF02926 THUMP domain AM356_RS10975 PF02609 Exonuclease VII small subunit AM356_RS10980 PF00348 Polyprenyl synthetase AM356_RS10985 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM356_RS10985 PF02780 Transketolase, C-terminal domain AM356_RS10985 PF02779 Transketolase, pyrimidine binding domain AM356_RS10990 PF05025 RbsD / FucU transport protein family AM356_RS10995 PF00005 ABC transporter AM356_RS11000 PF02653 Branched-chain amino acid transport system / permease component AM356_RS11005 PF13407 Periplasmic binding protein domain AM356_RS11010 PF00294 pfkB family carbohydrate kinase AM356_RS11015 PF00356 Bacterial regulatory proteins, lacI family AM356_RS11020 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AM356_RS11030 PF08274 PhnA Zinc-Ribbon AM356_RS11030 PF03831 PhnA domain AM356_RS11035 PF02769 AIR synthase related protein, C-terminal domain AM356_RS11035 PF00586 AIR synthase related protein, N-terminal domain AM356_RS11040 PF01029 NusB family AM356_RS11045 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM356_RS11050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM356_RS11050 PF01872 RibD C-terminal domain AM356_RS11055 PF03477 ATP cone domain AM356_RS11060 PF02355 Protein export membrane protein AM356_RS11060 PF07549 SecD/SecF GG Motif AM356_RS11065 PF02355 Protein export membrane protein AM356_RS11065 PF07549 SecD/SecF GG Motif AM356_RS11065 PF13721 SecD export protein N-terminal TM region AM356_RS11070 PF02699 Preprotein translocase subunit AM356_RS11075 PF01702 Queuine tRNA-ribosyltransferase AM356_RS11080 PF02547 Queuosine biosynthesis protein AM356_RS11085 PF04336 Acyl carrier protein phosphodiesterase AM356_RS11090 PF00578 AhpC/TSA family AM356_RS11090 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM356_RS11100 PF13247 4Fe-4S dicluster domain AM356_RS11100 PF12800 4Fe-4S binding domain AM356_RS11105 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AM356_RS11105 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AM356_RS11115 PF13247 4Fe-4S dicluster domain AM356_RS11120 PF01292 Prokaryotic cytochrome b561 AM356_RS11170 PF05525 Branched-chain amino acid transport protein AM356_RS11175 PF11808 Phosphate regulon sensor protein PhoR AM356_RS11175 PF00512 His Kinase A (phospho-acceptor) domain AM356_RS11175 PF00989 PAS fold AM356_RS11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS11180 PF00072 Response regulator receiver domain AM356_RS11180 PF00486 Transcriptional regulatory protein, C terminal AM356_RS11185 PF12320 Type 5 capsule protein repressor C-terminal domain AM356_RS11185 PF00149 Calcineurin-like phosphoesterase AM356_RS11190 PF13476 AAA domain AM356_RS11205 PF02872 5'-nucleotidase, C-terminal domain AM356_RS11205 PF17936 Bacterial Ig domain AM356_RS11205 PF00149 Calcineurin-like phosphoesterase AM356_RS11210 PF00445 Ribonuclease T2 family AM356_RS11215 PF02872 5'-nucleotidase, C-terminal domain AM356_RS11215 PF00149 Calcineurin-like phosphoesterase AM356_RS11220 PF13609 Gram-negative porin AM356_RS11225 PF04381 Putative exonuclease, RdgC AM356_RS11230 PF01206 Sulfurtransferase TusA AM356_RS11235 PF04143 Sulphur transport AM356_RS11240 PF02769 AIR synthase related protein, C-terminal domain AM356_RS11240 PF00586 AIR synthase related protein, N-terminal domain AM356_RS11245 PF01924 Hydrogenase formation hypA family AM356_RS11250 PF01455 HupF/HypC family AM356_RS11255 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM356_RS11260 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AM356_RS11265 PF01750 Hydrogenase maturation protease AM356_RS11270 PF00374 Nickel-dependent hydrogenase AM356_RS11275 PF03916 Polysulphide reductase, NrfD AM356_RS11280 PF13247 4Fe-4S dicluster domain AM356_RS11285 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM356_RS11285 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM356_RS11290 PF02472 Biopolymer transport protein ExbD/TolR AM356_RS11295 PF01618 MotA/TolQ/ExbB proton channel family AM356_RS11300 PF01053 Cys/Met metabolism PLP-dependent enzyme AM356_RS11305 PF09335 SNARE associated Golgi protein AM356_RS11310 PF08241 Methyltransferase domain AM356_RS11315 PF00465 Iron-containing alcohol dehydrogenase AM356_RS11320 PF00248 Aldo/keto reductase family AM356_RS11325 PF02369 Bacterial Ig-like domain (group 1) AM356_RS11325 PF09134 Invasin, domain 3 AM356_RS11325 PF11924 Inverse autotransporter, beta-domain AM356_RS11335 PF02142 MGS-like domain AM356_RS11335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM356_RS11335 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM356_RS11340 PF00117 Glutamine amidotransferase class-I AM356_RS11340 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM356_RS11345 PF01113 Dihydrodipicolinate reductase, N-terminus AM356_RS11345 PF05173 Dihydrodipicolinate reductase, C-terminus AM356_RS11350 PF02401 LytB protein AM356_RS11355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM356_RS11360 PF01252 Signal peptidase (SPase) II AM356_RS11365 PF08264 Anticodon-binding domain of tRNA AM356_RS11365 PF06827 Zinc finger found in FPG and IleRS AM356_RS11365 PF00133 tRNA synthetases class I (I, L, M and V) AM356_RS11370 PF06574 FAD synthetase AM356_RS11370 PF01687 Riboflavin kinase AM356_RS11380 PF01649 Ribosomal protein S20 AM356_RS11385 PF03466 LysR substrate binding domain AM356_RS11385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS11390 PF06965 Na+/H+ antiporter 1 AM356_RS11395 PF00226 DnaJ domain AM356_RS11395 PF01556 DnaJ C terminal domain AM356_RS11395 PF00684 DnaJ central domain AM356_RS11400 PF00012 Hsp70 protein AM356_RS11405 PF00994 Probable molybdopterin binding domain AM356_RS11415 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM356_RS11420 PF03883 Peroxide stress protein YaaA AM356_RS11430 PF14821 Threonine synthase N terminus AM356_RS11430 PF00291 Pyridoxal-phosphate dependent enzyme AM356_RS11435 PF00288 GHMP kinases N terminal domain AM356_RS11435 PF08544 GHMP kinases C terminal AM356_RS11440 PF00696 Amino acid kinase family AM356_RS11440 PF01842 ACT domain AM356_RS11440 PF03447 Homoserine dehydrogenase, NAD binding domain AM356_RS11440 PF13840 ACT domain AM356_RS11440 PF00742 Homoserine dehydrogenase AM356_RS11445 PF00486 Transcriptional regulatory protein, C terminal AM356_RS11445 PF00072 Response regulator receiver domain AM356_RS11450 PF05981 CreA protein AM356_RS11455 PF12833 Helix-turn-helix domain AM356_RS11455 PF06445 GyrI-like small molecule binding domain AM356_RS11460 PF00300 Histidine phosphatase superfamily (branch 1) AM356_RS11465 PF01931 Protein of unknown function DUF84 AM356_RS11470 PF01371 Trp repressor protein AM356_RS11475 PF01464 Transglycosylase SLT domain AM356_RS11475 PF14718 Soluble lytic murein transglycosylase L domain AM356_RS11480 PF00005 ABC transporter AM356_RS11480 PF12848 ABC transporter AM356_RS11490 PF08281 Sigma-70, region 4 AM356_RS11490 PF04542 Sigma-70 region 2 AM356_RS11500 PF07715 TonB-dependent Receptor Plug Domain AM356_RS11505 PF06472 ABC transporter transmembrane region 2 AM356_RS11505 PF00005 ABC transporter AM356_RS11510 PF00675 Insulinase (Peptidase family M16) AM356_RS11510 PF05193 Peptidase M16 inactive domain AM356_RS11520 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM356_RS11520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM356_RS11525 PF00375 Sodium:dicarboxylate symporter family AM356_RS11530 PF09335 SNARE associated Golgi protein AM356_RS11535 PF05957 Bacterial protein of unknown function (DUF883) AM356_RS11540 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AM356_RS11550 PF07681 DoxX AM356_RS11555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS11555 PF03466 LysR substrate binding domain AM356_RS11560 PF17954 Quercetinase C-terminal cupin domain AM356_RS11560 PF02678 Pirin AM356_RS11570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM356_RS11575 PF04348 LppC putative lipoprotein AM356_RS11580 PF02021 Uncharacterised protein family UPF0102 AM356_RS11585 PF13580 SIS domain AM356_RS11590 PF04972 BON domain AM356_RS11595 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM356_RS11600 PF01730 UreF AM356_RS11605 PF02814 UreE urease accessory protein, N-terminal domain AM356_RS11605 PF05194 UreE urease accessory protein, C-terminal domain AM356_RS11610 PF01979 Amidohydrolase family AM356_RS11610 PF00449 Urease alpha-subunit, N-terminal domain AM356_RS11615 PF00699 Urease beta subunit AM356_RS11620 PF00547 Urease, gamma subunit AM356_RS11625 PF01774 UreD urease accessory protein AM356_RS11630 PF12833 Helix-turn-helix domain AM356_RS11635 PF00912 Transglycosylase AM356_RS11645 PF00512 His Kinase A (phospho-acceptor) domain AM356_RS11645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS11645 PF18415 Histidine kinase receptor ArcB trans-membrane domain AM356_RS11645 PF01627 Hpt domain AM356_RS11645 PF00072 Response regulator receiver domain AM356_RS11645 PF00989 PAS fold AM356_RS11650 PF01493 GXGXG motif AM356_RS11650 PF04898 Glutamate synthase central domain AM356_RS11650 PF00310 Glutamine amidotransferases class-II AM356_RS11650 PF01645 Conserved region in glutamate synthase AM356_RS11655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM356_RS11655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM356_RS11660 PF03606 C4-dicarboxylate anaerobic carrier AM356_RS11665 PF07687 Peptidase dimerisation domain AM356_RS11665 PF01546 Peptidase family M20/M25/M40 AM356_RS11670 PF13411 MerR HTH family regulatory protein AM356_RS11675 PF04386 Stringent starvation protein B AM356_RS11680 PF02798 Glutathione S-transferase, N-terminal domain AM356_RS11680 PF00043 Glutathione S-transferase, C-terminal domain AM356_RS11685 PF00380 Ribosomal protein S9/S16 AM356_RS11690 PF00572 Ribosomal protein L13 AM356_RS11695 PF03969 AFG1-like ATPase AM356_RS11700 PF06295 Protein of unknown function (DUF1043) AM356_RS11705 PF00595 PDZ domain AM356_RS11705 PF13180 PDZ domain AM356_RS11710 PF13180 PDZ domain AM356_RS11720 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM356_RS11725 PF01722 BolA-like protein AM356_RS11735 PF05494 MlaC protein AM356_RS11740 PF02470 MlaD protein AM356_RS11745 PF02405 Permease MlaE AM356_RS11750 PF00005 ABC transporter AM356_RS11755 PF01699 Sodium/calcium exchanger protein AM356_RS11760 PF00571 CBS domain AM356_RS11760 PF01380 SIS domain AM356_RS11770 PF06835 Lipopolysaccharide-assembly, LptC-related AM356_RS11775 PF03968 OstA-like protein AM356_RS11780 PF00005 ABC transporter AM356_RS11780 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM356_RS11785 PF04552 Sigma-54, DNA binding domain AM356_RS11785 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM356_RS11785 PF04963 Sigma-54 factor, core binding domain AM356_RS11790 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM356_RS11795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM356_RS11800 PF03668 P-loop ATPase protein family AM356_RS11805 PF00381 PTS HPr component phosphorylation site AM356_RS11810 PF01272 Transcription elongation factor, GreA/GreB, C-term AM356_RS11810 PF14760 Rnk N-terminus AM356_RS11815 PF01523 Putative modulator of DNA gyrase AM356_RS11820 PF04751 Protein of unknown function (DUF615) AM356_RS11825 PF01337 Barstar (barnase inhibitor) AM356_RS11835 PF01523 Putative modulator of DNA gyrase AM356_RS11840 PF00795 Carbon-nitrogen hydrolase AM356_RS11845 PF13502 AsmA-like C-terminal region AM356_RS11845 PF13116 Protein of unknown function AM356_RS11850 PF00575 S1 RNA binding domain AM356_RS11850 PF10150 Ribonuclease E/G family AM356_RS11855 PF02545 Maf-like protein AM356_RS11860 PF04093 rod shape-determining protein MreD AM356_RS11865 PF04085 rod shape-determining protein MreC AM356_RS11875 PF00107 Zinc-binding dehydrogenase AM356_RS11875 PF08240 Alcohol dehydrogenase GroES-like domain AM356_RS11880 PF01220 Dehydroquinase class II AM356_RS11885 PF00364 Biotin-requiring enzyme AM356_RS11890 PF00289 Biotin carboxylase, N-terminal domain AM356_RS11890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM356_RS11890 PF02785 Biotin carboxylase C-terminal domain AM356_RS11895 PF06196 Protein of unknown function (DUF997) AM356_RS11900 PF00474 Sodium:solute symporter family AM356_RS11910 PF01207 Dihydrouridine synthase (Dus) AM356_RS11915 PF02954 Bacterial regulatory protein, Fis family AM356_RS11940 PF07690 Major Facilitator Superfamily AM356_RS11945 PF03009 Glycerophosphoryl diester phosphodiesterase family AM356_RS11950 PF13416 Bacterial extracellular solute-binding protein AM356_RS11955 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS11960 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS11965 PF17912 MalK OB fold domain AM356_RS11965 PF00005 ABC transporter AM356_RS11970 PF01435 Peptidase family M48 AM356_RS11975 PF01047 MarR family AM356_RS11980 PF07690 Major Facilitator Superfamily AM356_RS11985 PF12568 Acetyltransferase (GNAT) domain, PanZ AM356_RS11990 PF02595 Glycerate kinase family AM356_RS11995 PF00140 Sigma-70 factor, region 1.2 AM356_RS11995 PF04545 Sigma-70, region 4 AM356_RS11995 PF04542 Sigma-70 region 2 AM356_RS12000 PF18075 FtsX extracellular domain AM356_RS12000 PF02687 FtsX-like permease family AM356_RS12005 PF00005 ABC transporter AM356_RS12010 PF00448 SRP54-type protein, GTPase domain AM356_RS12010 PF02881 SRP54-type protein, helical bundle domain AM356_RS12020 PF06611 Protein of unknown function (DUF1145) AM356_RS12030 PF07947 YhhN family AM356_RS12035 PF00403 Heavy-metal-associated domain AM356_RS12040 PF00873 AcrB/AcrD/AcrF family AM356_RS12045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM356_RS12045 PF00529 HlyD membrane-fusion protein of T1SS AM356_RS12050 PF01385 Probable transposase AM356_RS12050 PF07282 Putative transposase DNA-binding domain AM356_RS12050 PF12323 Helix-turn-helix domain AM356_RS12060 PF01206 Sulfurtransferase TusA AM356_RS12070 PF02592 Putative vitamin uptake transporter AM356_RS12075 PF00465 Iron-containing alcohol dehydrogenase AM356_RS12080 PF13183 4Fe-4S dicluster domain AM356_RS12080 PF02754 Cysteine-rich domain AM356_RS12085 PF00890 FAD binding domain AM356_RS12090 PF01266 FAD dependent oxidoreductase AM356_RS12090 PF04324 BFD-like [2Fe-2S] binding domain AM356_RS12095 PF07690 Major Facilitator Superfamily AM356_RS12100 PF03009 Glycerophosphoryl diester phosphodiesterase family AM356_RS12105 PF00152 tRNA synthetases class II (D, K and N) AM356_RS12110 PF02910 Fumarate reductase flavoprotein C-term AM356_RS12110 PF00890 FAD binding domain AM356_RS12115 PF13183 4Fe-4S dicluster domain AM356_RS12115 PF13085 2Fe-2S iron-sulfur cluster binding domain AM356_RS12120 PF02300 Fumarate reductase subunit C AM356_RS12125 PF02313 Fumarate reductase subunit D AM356_RS12130 PF00893 Small Multidrug Resistance protein AM356_RS12135 PF01455 HupF/HypC family AM356_RS12140 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM356_RS12145 PF00037 4Fe-4S binding domain AM356_RS12145 PF12798 4Fe-4S binding domain AM356_RS12150 PF00158 Sigma-54 interaction domain AM356_RS12150 PF01590 GAF domain AM356_RS12165 PF08019 Phosphoethanolamine transferase EptA/EptB AM356_RS12165 PF00884 Sulfatase AM356_RS12170 PF01070 FMN-dependent dehydrogenase AM356_RS12175 PF02665 Nitrate reductase gamma subunit AM356_RS12180 PF02613 Nitrate reductase delta subunit AM356_RS12185 PF14711 Respiratory nitrate reductase beta C-terminal AM356_RS12185 PF13247 4Fe-4S dicluster domain AM356_RS12190 PF14710 Respiratory nitrate reductase alpha N-terminal AM356_RS12190 PF01568 Molydopterin dinucleotide binding domain AM356_RS12190 PF00384 Molybdopterin oxidoreductase AM356_RS12195 PF07690 Major Facilitator Superfamily AM356_RS12200 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM356_RS12200 PF07730 Histidine kinase AM356_RS12200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS12200 PF00672 HAMP domain AM356_RS12205 PF00072 Response regulator receiver domain AM356_RS12205 PF00196 Bacterial regulatory proteins, luxR family AM356_RS12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS12210 PF03466 LysR substrate binding domain AM356_RS12225 PF01925 Sulfite exporter TauE/SafE AM356_RS12230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM356_RS12230 PF02785 Biotin carboxylase C-terminal domain AM356_RS12230 PF00289 Biotin carboxylase, N-terminal domain AM356_RS12230 PF00364 Biotin-requiring enzyme AM356_RS12235 PF02682 Carboxyltransferase domain, subdomain C and D AM356_RS12240 PF03746 LamB/YcsF family AM356_RS12245 PF01566 Natural resistance-associated macrophage protein AM356_RS12275 PF12724 Flavodoxin domain AM356_RS12280 PF02386 Cation transport protein AM356_RS12285 PF09186 Domain of unknown function (DUF1949) AM356_RS12285 PF01205 Uncharacterized protein family UPF0029 AM356_RS12290 PF00557 Metallopeptidase family M24 AM356_RS12295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM356_RS12295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM356_RS12295 PF00378 Enoyl-CoA hydratase/isomerase AM356_RS12300 PF00108 Thiolase, N-terminal domain AM356_RS12300 PF02803 Thiolase, C-terminal domain AM356_RS12305 PF00970 Oxidoreductase FAD-binding domain AM356_RS12305 PF00175 Oxidoreductase NAD-binding domain AM356_RS12310 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM356_RS12315 PF03575 Peptidase family S51 AM356_RS12320 PF02357 Transcription termination factor nusG AM356_RS12325 PF00902 Sec-independent protein translocase protein (TatC) AM356_RS12335 PF02416 mttA/Hcf106 family AM356_RS12340 PF03109 ABC1 family AM356_RS12345 PF02036 SCP-2 sterol transfer family AM356_RS12350 PF01209 ubiE/COQ5 methyltransferase family AM356_RS12355 PF02646 RmuC family AM356_RS12360 PF09335 SNARE associated Golgi protein AM356_RS12365 PF13350 Tyrosine phosphatase family AM356_RS12370 PF01048 Phosphorylase superfamily AM356_RS12375 PF06078 Bacterial protein of unknown function (DUF937) AM356_RS12385 PF08267 Cobalamin-independent synthase, N-terminal domain AM356_RS12385 PF01717 Cobalamin-independent synthase, Catalytic domain AM356_RS12390 PF03466 LysR substrate binding domain AM356_RS12390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS12395 PF00892 EamA-like transporter family AM356_RS12400 PF00999 Sodium/hydrogen exchanger family AM356_RS12405 PF13302 Acetyltransferase (GNAT) domain AM356_RS12410 PF00860 Permease family AM356_RS12425 PF01545 Cation efflux family AM356_RS12430 PF01842 ACT domain AM356_RS12435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM356_RS12435 PF00205 Thiamine pyrophosphate enzyme, central domain AM356_RS12435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM356_RS12450 PF01418 Helix-turn-helix domain, rpiR family AM356_RS12450 PF01380 SIS domain AM356_RS12455 PF00367 phosphotransferase system, EIIB AM356_RS12455 PF02378 Phosphotransferase system, EIIC AM356_RS12460 PF13580 SIS domain AM356_RS12465 PF00294 pfkB family carbohydrate kinase AM356_RS12470 PF01791 DeoC/LacD family aldolase AM356_RS12475 PF08220 DeoR-like helix-turn-helix domain AM356_RS12475 PF00455 DeoR C terminal sensor domain AM356_RS12485 PF00472 RF-1 domain AM356_RS12500 PF12323 Helix-turn-helix domain AM356_RS12500 PF01385 Probable transposase AM356_RS12500 PF07282 Putative transposase DNA-binding domain AM356_RS12545 PF00589 Phage integrase family AM356_RS12545 PF13356 Arm DNA-binding domain AM356_RS12565 PF08220 DeoR-like helix-turn-helix domain AM356_RS12565 PF13280 WYL domain AM356_RS12570 PF06067 Domain of unknown function (DUF932) AM356_RS12580 PF01926 50S ribosome-binding GTPase AM356_RS12625 PF01555 DNA methylase AM356_RS12625 PF18273 Type III R-M EcoP15I C-terminal domain AM356_RS12630 PF08774 VRR-NUC domain AM356_RS12630 PF04851 Type III restriction enzyme, res subunit AM356_RS12655 PF13356 Arm DNA-binding domain AM356_RS12655 PF00589 Phage integrase family AM356_RS12665 PF00144 Beta-lactamase AM356_RS12670 PF03739 Lipopolysaccharide export system permease LptF/LptG AM356_RS12675 PF03739 Lipopolysaccharide export system permease LptF/LptG AM356_RS12680 PF02789 Cytosol aminopeptidase family, N-terminal domain AM356_RS12680 PF00883 Cytosol aminopeptidase family, catalytic domain AM356_RS12685 PF04364 DNA polymerase III chi subunit, HolC AM356_RS12690 PF00133 tRNA synthetases class I (I, L, M and V) AM356_RS12690 PF10458 Valyl tRNA synthetase tRNA binding arm AM356_RS12690 PF08264 Anticodon-binding domain of tRNA AM356_RS12695 PF00583 Acetyltransferase (GNAT) family AM356_RS12700 PF13978 Protein of unknown function (DUF4223) AM356_RS12705 PF02678 Pirin AM356_RS12705 PF05726 Pirin C-terminal cupin domain AM356_RS12710 PF06877 Regulator of ribonuclease activity B AM356_RS12720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM356_RS12720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM356_RS12730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM356_RS12730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM356_RS12735 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AM356_RS12735 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AM356_RS12740 PF01042 Endoribonuclease L-PSP AM356_RS12750 PF03477 ATP cone domain AM356_RS12750 PF13597 Anaerobic ribonucleoside-triphosphate reductase AM356_RS12775 PF07338 Protein of unknown function (DUF1471) AM356_RS12780 PF01541 GIY-YIG catalytic domain AM356_RS12785 PF13508 Acetyltransferase (GNAT) domain AM356_RS12790 PF02036 SCP-2 sterol transfer family AM356_RS12795 PF01136 Peptidase family U32 AM356_RS12800 PF01136 Peptidase family U32 AM356_RS12805 PF09160 FimH, mannose binding AM356_RS12815 PF00419 Fimbrial protein AM356_RS12820 PF13953 PapC C-terminal domain AM356_RS12820 PF13954 PapC N-terminal domain AM356_RS12820 PF00577 Outer membrane usher protein AM356_RS12825 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS12825 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS12830 PF00419 Fimbrial protein AM356_RS12845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM356_RS12845 PF00529 HlyD membrane-fusion protein of T1SS AM356_RS12850 PF07694 5TMR of 5TMR-LYT AM356_RS12850 PF06580 Histidine kinase AM356_RS12855 PF00072 Response regulator receiver domain AM356_RS12855 PF04397 LytTr DNA-binding domain AM356_RS12875 PF07690 Major Facilitator Superfamily AM356_RS12880 PF01042 Endoribonuclease L-PSP AM356_RS12890 PF08348 YheO-like PAS domain AM356_RS12890 PF13309 HTH domain AM356_RS12895 PF03880 DbpA RNA binding domain AM356_RS12895 PF00270 DEAD/DEAH box helicase AM356_RS12895 PF00271 Helicase conserved C-terminal domain AM356_RS12895 PF12343 Cold shock protein DEAD box A AM356_RS12900 PF13181 Tetratricopeptide repeat AM356_RS12900 PF07719 Tetratricopeptide repeat AM356_RS12905 PF00013 KH domain AM356_RS12905 PF00575 S1 RNA binding domain AM356_RS12905 PF03725 3' exoribonuclease family, domain 2 AM356_RS12905 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM356_RS12905 PF01138 3' exoribonuclease family, domain 1 AM356_RS12910 PF00312 Ribosomal protein S15 AM356_RS12915 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM356_RS12915 PF09157 Pseudouridine synthase II TruB, C-terminal AM356_RS12915 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM356_RS12920 PF02033 Ribosome-binding factor A AM356_RS12925 PF11987 Translation-initiation factor 2 AM356_RS12925 PF08364 Bacterial translation initiation factor IF-2 associated region AM356_RS12925 PF04760 Translation initiation factor IF-2, N-terminal region AM356_RS12925 PF03144 Elongation factor Tu domain 2 AM356_RS12925 PF00009 Elongation factor Tu GTP binding domain AM356_RS12930 PF00575 S1 RNA binding domain AM356_RS12930 PF13184 NusA-like KH domain AM356_RS12930 PF08529 NusA N-terminal domain AM356_RS12935 PF02576 RimP N-terminal domain AM356_RS12935 PF17384 RimP C-terminal SH3 domain AM356_RS12950 PF03840 Preprotein translocase SecG subunit AM356_RS12955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM356_RS12955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM356_RS12955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM356_RS12955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM356_RS12960 PF00809 Pterin binding enzyme AM356_RS12965 PF01434 Peptidase family M41 AM356_RS12965 PF06480 FtsH Extracellular AM356_RS12965 PF17862 AAA+ lid domain AM356_RS12965 PF00004 ATPase family associated with various cellular activities (AAA) AM356_RS12970 PF01728 FtsJ-like methyltransferase AM356_RS12975 PF01985 CRS1 / YhbY (CRM) domain AM356_RS12980 PF01272 Transcription elongation factor, GreA/GreB, C-term AM356_RS12980 PF03449 Transcription elongation factor, N-terminal AM356_RS12985 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AM356_RS12990 PF01018 GTP1/OBG AM356_RS12990 PF01926 50S ribosome-binding GTPase AM356_RS12995 PF01016 Ribosomal L27 protein AM356_RS13000 PF00829 Ribosomal prokaryotic L21 protein AM356_RS13005 PF00348 Polyprenyl synthetase AM356_RS13020 PF13693 Winged helix-turn-helix DNA-binding AM356_RS13025 PF00056 lactate/malate dehydrogenase, NAD binding domain AM356_RS13025 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM356_RS13030 PF01316 Arginine repressor, DNA binding domain AM356_RS13030 PF02863 Arginine repressor, C-terminal domain AM356_RS13035 PF02875 Mur ligase family, glutamate ligase domain AM356_RS13035 PF01225 Mur ligase family, catalytic domain AM356_RS13035 PF08245 Mur ligase middle domain AM356_RS13040 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM356_RS13045 PF00719 Inorganic pyrophosphatase AM356_RS13065 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AM356_RS13070 PF04357 TamB, inner membrane protein subunit of TAM complex AM356_RS13075 PF17243 POTRA domain TamA domain 1 AM356_RS13075 PF01103 Surface antigen AM356_RS13075 PF07244 Surface antigen variable number repeat AM356_RS13080 PF01625 Peptide methionine sulfoxide reductase AM356_RS13085 PF00571 CBS domain AM356_RS13085 PF03471 Transporter associated domain AM356_RS13085 PF01595 Cyclin M transmembrane N-terminal domain AM356_RS13090 PF06526 Protein of unknown function (DUF1107) AM356_RS13095 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM356_RS13100 PF00459 Inositol monophosphatase family AM356_RS13105 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM356_RS13105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM356_RS13110 PF00171 Aldehyde dehydrogenase family AM356_RS13115 PF07282 Putative transposase DNA-binding domain AM356_RS13115 PF01385 Probable transposase AM356_RS13115 PF12323 Helix-turn-helix domain AM356_RS13125 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AM356_RS13130 PF00444 Ribosomal protein L36 AM356_RS13135 PF01197 Ribosomal protein L31 AM356_RS13140 PF04225 Opacity-associated protein A LysM-like domain AM356_RS13140 PF08525 Opacity-associated protein A N-terminal motif AM356_RS13145 PF03948 Ribosomal protein L9, C-terminal domain AM356_RS13145 PF01281 Ribosomal protein L9, N-terminal domain AM356_RS13150 PF01084 Ribosomal protein S18 AM356_RS13155 PF00436 Single-strand binding protein family AM356_RS13160 PF01250 Ribosomal protein S6 AM356_RS13165 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM356_RS13165 PF00588 SpoU rRNA Methylase family AM356_RS13170 PF08206 Ribonuclease B OB domain AM356_RS13170 PF00575 S1 RNA binding domain AM356_RS13170 PF00773 RNB domain AM356_RS13170 PF08461 Ribonuclease R winged-helix domain AM356_RS13170 PF17876 Cold shock domain AM356_RS13175 PF02082 Transcriptional regulator AM356_RS13180 PF00709 Adenylosuccinate synthetase AM356_RS13185 PF01145 SPFH domain / Band 7 family AM356_RS13190 PF01145 SPFH domain / Band 7 family AM356_RS13190 PF12221 Bacterial membrane protein N terminal AM356_RS13195 PF13167 GTP-binding GTPase N-terminal AM356_RS13195 PF16360 GTP-binding GTPase Middle Region AM356_RS13195 PF01926 50S ribosome-binding GTPase AM356_RS13200 PF17209 Hfq protein AM356_RS13210 PF08676 MutL C terminal dimerisation domain AM356_RS13210 PF01119 DNA mismatch repair protein, C-terminal domain AM356_RS13215 PF01520 N-acetylmuramoyl-L-alanine amidase AM356_RS13220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM356_RS13225 PF08331 Domain of unknown function (DUF1730) AM356_RS13255 PF00929 Exonuclease AM356_RS13260 PF03193 RsgA GTPase AM356_RS13265 PF02666 Phosphatidylserine decarboxylase AM356_RS13270 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM356_RS13270 PF12795 Mechanosensitive ion channel porin domain AM356_RS13270 PF00924 Mechanosensitive ion channel AM356_RS13280 PF00419 Fimbrial protein AM356_RS13285 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS13285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS13290 PF13953 PapC C-terminal domain AM356_RS13290 PF13954 PapC N-terminal domain AM356_RS13290 PF00577 Outer membrane usher protein AM356_RS13305 PF12146 Serine aminopeptidase, S33 AM356_RS13310 PF16124 RecQ zinc-binding AM356_RS13310 PF00570 HRDC domain AM356_RS13310 PF00271 Helicase conserved C-terminal domain AM356_RS13310 PF09382 RQC domain AM356_RS13310 PF00270 DEAD/DEAH box helicase AM356_RS13315 PF02253 Phospholipase A1 AM356_RS13320 PF03061 Thioesterase superfamily AM356_RS13325 PF00892 EamA-like transporter family AM356_RS13335 PF13361 UvrD-like helicase C-terminal domain AM356_RS13335 PF00580 UvrD/REP helicase N-terminal domain AM356_RS13340 PF13419 Haloacid dehalogenase-like hydrolase AM356_RS13345 PF00589 Phage integrase family AM356_RS13345 PF02899 Phage integrase, N-terminal SAM-like domain AM356_RS13350 PF04340 Protein of unknown function, DUF484 AM356_RS13355 PF01678 Diaminopimelate epimerase AM356_RS13360 PF13627 Prokaryotic lipoprotein-attachment site AM356_RS13365 PF01491 Frataxin-like domain AM356_RS13370 PF01295 Adenylate cyclase, class-I AM356_RS13370 PF12633 Adenylate cyclase NT domain AM356_RS13375 PF03900 Porphobilinogen deaminase, C-terminal domain AM356_RS13375 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM356_RS13380 PF02602 Uroporphyrinogen-III synthase HemD AM356_RS13385 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AM356_RS13390 PF07219 HemY protein N-terminus AM356_RS13390 PF07719 Tetratricopeptide repeat AM356_RS13420 PF03808 Glycosyl transferase WecB/TagA/CpsF family AM356_RS13425 PF06899 WzyE protein, O-antigen assembly polymerase AM356_RS13430 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AM356_RS13435 PF01943 Polysaccharide biosynthesis protein AM356_RS13440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM356_RS13450 PF00483 Nucleotidyl transferase AM356_RS13455 PF16363 GDP-mannose 4,6 dehydratase AM356_RS13460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM356_RS13460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM356_RS13460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM356_RS13465 PF02350 UDP-N-acetylglucosamine 2-epimerase AM356_RS13470 PF02706 Chain length determinant protein AM356_RS13475 PF00953 Glycosyl transferase family 4 AM356_RS13480 PF07497 Rho termination factor, RNA-binding domain AM356_RS13480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM356_RS13480 PF07498 Rho termination factor, N-terminal domain AM356_RS13485 PF00085 Thioredoxin AM356_RS13490 PF00271 Helicase conserved C-terminal domain AM356_RS13490 PF00270 DEAD/DEAH box helicase AM356_RS13495 PF02541 Ppx/GppA phosphatase family AM356_RS13500 PF00580 UvrD/REP helicase N-terminal domain AM356_RS13500 PF13361 UvrD-like helicase C-terminal domain AM356_RS13510 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ AM356_RS13515 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM356_RS13515 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM356_RS13520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS13520 PF03466 LysR substrate binding domain AM356_RS13525 PF00291 Pyridoxal-phosphate dependent enzyme AM356_RS13525 PF00585 C-terminal regulatory domain of Threonine dehydratase AM356_RS13530 PF00920 Dehydratase family AM356_RS13535 PF01063 Amino-transferase class IV AM356_RS13545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM356_RS13545 PF00205 Thiamine pyrophosphate enzyme, central domain AM356_RS13545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM356_RS13550 PF08046 IlvGEDA operon leader peptide AM356_RS13555 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM356_RS13555 PF01078 Magnesium chelatase, subunit ChlI AM356_RS13560 PF04219 Protein of unknown function, DUF AM356_RS13565 PF03466 LysR substrate binding domain AM356_RS13565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS13605 PF00132 Bacterial transferase hexapeptide (six repeats) AM356_RS13610 PF07369 Protein of unknown function (DUF1488) AM356_RS13615 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM356_RS13615 PF01488 Shikimate / quinate 5-dehydrogenase AM356_RS13615 PF08501 Shikimate dehydrogenase substrate binding domain AM356_RS13620 PF01300 Telomere recombination AM356_RS13625 PF01396 Topoisomerase DNA binding C4 zinc finger AM356_RS13630 PF02481 DNA recombination-mediator protein A AM356_RS13630 PF17782 DprA winged helix domain AM356_RS13635 PF01327 Polypeptide deformylase AM356_RS13640 PF02911 Formyl transferase, C-terminal domain AM356_RS13640 PF00551 Formyl transferase AM356_RS13645 PF01189 16S rRNA methyltransferase RsmB/F AM356_RS13645 PF01029 NusB family AM356_RS13650 PF02080 TrkA-C domain AM356_RS13650 PF02254 TrkA-N domain AM356_RS13655 PF01741 Large-conductance mechanosensitive channel, MscL AM356_RS13660 PF03889 Alternative ribosome-rescue factor A AM356_RS13665 PF13411 MerR HTH family regulatory protein AM356_RS13670 PF01196 Ribosomal protein L17 AM356_RS13675 PF01000 RNA polymerase Rpb3/RpoA insert domain AM356_RS13675 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM356_RS13675 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM356_RS13680 PF00163 Ribosomal protein S4/S9 N-terminal domain AM356_RS13680 PF01479 S4 domain AM356_RS13685 PF00411 Ribosomal protein S11 AM356_RS13690 PF00416 Ribosomal protein S13/S18 AM356_RS13695 PF00444 Ribosomal protein L36 AM356_RS13700 PF00344 SecY translocase AM356_RS13705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM356_RS13710 PF00327 Ribosomal protein L30p/L7e AM356_RS13715 PF00333 Ribosomal protein S5, N-terminal domain AM356_RS13715 PF03719 Ribosomal protein S5, C-terminal domain AM356_RS13720 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM356_RS13725 PF00347 Ribosomal protein L6 AM356_RS13730 PF00410 Ribosomal protein S8 AM356_RS13735 PF00253 Ribosomal protein S14p/S29e AM356_RS13740 PF00281 Ribosomal protein L5 AM356_RS13740 PF00673 ribosomal L5P family C-terminus AM356_RS13745 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM356_RS13750 PF00238 Ribosomal protein L14p/L23e AM356_RS13755 PF00366 Ribosomal protein S17 AM356_RS13760 PF00831 Ribosomal L29 protein AM356_RS13765 PF00252 Ribosomal protein L16p/L10e AM356_RS13770 PF00189 Ribosomal protein S3, C-terminal domain AM356_RS13770 PF07650 KH domain AM356_RS13775 PF00237 Ribosomal protein L22p/L17e AM356_RS13780 PF00203 Ribosomal protein S19 AM356_RS13785 PF03947 Ribosomal Proteins L2, C-terminal domain AM356_RS13785 PF00181 Ribosomal Proteins L2, RNA binding domain AM356_RS13790 PF00276 Ribosomal protein L23 AM356_RS13795 PF00573 Ribosomal protein L4/L1 family AM356_RS13800 PF00297 Ribosomal protein L3 AM356_RS13805 PF00338 Ribosomal protein S10p/S20e AM356_RS13810 PF00210 Ferritin-like domain AM356_RS13815 PF04324 BFD-like [2Fe-2S] binding domain AM356_RS13820 PF00009 Elongation factor Tu GTP binding domain AM356_RS13820 PF03144 Elongation factor Tu domain 2 AM356_RS13820 PF03143 Elongation factor Tu C-terminal domain AM356_RS13850 PF00485 Phosphoribulokinase / Uridine kinase family AM356_RS13855 PF02237 Biotin protein ligase C terminal domain AM356_RS13855 PF08279 HTH domain AM356_RS13855 PF03099 Biotin/lipoate A/B protein ligase family AM356_RS13860 PF01565 FAD binding domain AM356_RS13860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM356_RS13895 PF01177 Asp/Glu/Hydantoin racemase AM356_RS13900 PF00593 TonB dependent receptor AM356_RS13900 PF07715 TonB-dependent Receptor Plug Domain AM356_RS13905 PF05958 tRNA (Uracil-5-)-methyltransferase AM356_RS13910 PF07226 Protein of unknown function (DUF1422) AM356_RS13915 PF00440 Bacterial regulatory proteins, tetR family AM356_RS13920 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM356_RS13920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM356_RS13925 PF03466 LysR substrate binding domain AM356_RS13925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS13930 PF00206 Lyase AM356_RS13930 PF14698 Argininosuccinate lyase C-terminal AM356_RS13935 PF00764 Arginosuccinate synthase AM356_RS13940 PF00696 Amino acid kinase family AM356_RS13945 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM356_RS13945 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM356_RS13950 PF01546 Peptidase family M20/M25/M40 AM356_RS13950 PF07687 Peptidase dimerisation domain AM356_RS13955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM356_RS13955 PF00205 Thiamine pyrophosphate enzyme, central domain AM356_RS13955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM356_RS13970 PF01546 Peptidase family M20/M25/M40 AM356_RS13970 PF07687 Peptidase dimerisation domain AM356_RS13975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS13975 PF03466 LysR substrate binding domain AM356_RS13980 PF00083 Sugar (and other) transporter AM356_RS13980 PF08946 Osmosensory transporter coiled coil AM356_RS13985 PF03441 FAD binding domain of DNA photolyase AM356_RS13985 PF00875 DNA photolyase AM356_RS13990 PF00535 Glycosyl transferase family 2 AM356_RS13995 PF00311 Phosphoenolpyruvate carboxylase AM356_RS14005 PF03350 Uncharacterized protein family, UPF0114 AM356_RS14010 PF03447 Homoserine dehydrogenase, NAD binding domain AM356_RS14010 PF00742 Homoserine dehydrogenase AM356_RS14010 PF00696 Amino acid kinase family AM356_RS14015 PF01053 Cys/Met metabolism PLP-dependent enzyme AM356_RS14020 PF01340 Met Apo-repressor, MetJ AM356_RS14025 PF07804 HipA-like C-terminal domain AM356_RS14030 PF01197 Ribosomal protein L31 AM356_RS14035 PF00270 DEAD/DEAH box helicase AM356_RS14035 PF00271 Helicase conserved C-terminal domain AM356_RS14035 PF18074 Primosomal protein N C-terminal domain AM356_RS14035 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM356_RS14035 PF17764 3′ DNA-binding domain (3′BD) AM356_RS14040 PF00356 Bacterial regulatory proteins, lacI family AM356_RS14045 PF05036 Sporulation related domain AM356_RS14050 PF00227 Proteasome subunit AM356_RS14055 PF10431 C-terminal, D2-small domain, of ClpB protein AM356_RS14055 PF07724 AAA domain (Cdc48 subfamily) AM356_RS14055 PF00004 ATPase family associated with various cellular activities (AAA) AM356_RS14060 PF01040 UbiA prenyltransferase family AM356_RS14065 PF03737 Aldolase/RraA AM356_RS14070 PF06005 Cell division protein ZapB AM356_RS14075 PF00230 Major intrinsic protein AM356_RS14080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM356_RS14080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM356_RS14085 PF07690 Major Facilitator Superfamily AM356_RS14090 PF00970 Oxidoreductase FAD-binding domain AM356_RS14090 PF00175 Oxidoreductase NAD-binding domain AM356_RS14095 PF05656 Protein of unknown function (DUF805) AM356_RS14100 PF07305 Protein of unknown function (DUF1454) AM356_RS14105 PF00121 Triosephosphate isomerase AM356_RS14115 PF00365 Phosphofructokinase AM356_RS14125 PF00884 Sulfatase AM356_RS14130 PF07813 LTXXQ motif family protein AM356_RS14135 PF00486 Transcriptional regulatory protein, C terminal AM356_RS14135 PF00072 Response regulator receiver domain AM356_RS14140 PF16527 Two-component sensor protein CpxA, periplasmic domain AM356_RS14140 PF00672 HAMP domain AM356_RS14140 PF00512 His Kinase A (phospho-acceptor) domain AM356_RS14140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS14145 PF00535 Glycosyl transferase family 2 AM356_RS14150 PF14667 Polysaccharide biosynthesis C-terminal domain AM356_RS14155 PF12464 Maltose acetyltransferase AM356_RS14155 PF00132 Bacterial transferase hexapeptide (six repeats) AM356_RS14155 PF14602 Hexapeptide repeat of succinyl-transferase AM356_RS14165 PF00535 Glycosyl transferase family 2 AM356_RS14185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM356_RS14185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM356_RS14185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM356_RS14190 PF00588 SpoU rRNA Methylase family AM356_RS14195 PF00535 Glycosyl transferase family 2 AM356_RS14200 PF06426 Serine acetyltransferase, N-terminal AM356_RS14200 PF00132 Bacterial transferase hexapeptide (six repeats) AM356_RS14205 PF06426 Serine acetyltransferase, N-terminal AM356_RS14205 PF00132 Bacterial transferase hexapeptide (six repeats) AM356_RS14210 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM356_RS14210 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM356_RS14215 PF02556 Preprotein translocase subunit SecB AM356_RS14220 PF00581 Rhodanese-like domain AM356_RS14230 PF00919 Uncharacterized protein family UPF0004 AM356_RS14230 PF18693 TRAM domain AM356_RS14230 PF04055 Radical SAM superfamily AM356_RS14235 PF01551 Peptidase family M23 AM356_RS14240 PF04748 Divergent polysaccharide deacetylase AM356_RS14245 PF00107 Zinc-binding dehydrogenase AM356_RS14245 PF08240 Alcohol dehydrogenase GroES-like domain AM356_RS14250 PF00155 Aminotransferase class I and II AM356_RS14255 PF01370 NAD dependent epimerase/dehydratase family AM356_RS14260 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM356_RS14265 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM356_RS14270 PF01501 Glycosyl transferase family 8 AM356_RS14270 PF00535 Glycosyl transferase family 2 AM356_RS14275 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM356_RS14285 PF00534 Glycosyl transferases group 1 AM356_RS14285 PF13439 Glycosyltransferase Family 4 AM356_RS14290 PF00534 Glycosyl transferases group 1 AM356_RS14290 PF13439 Glycosyltransferase Family 4 AM356_RS14295 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM356_RS14300 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM356_RS14305 PF00535 Glycosyl transferase family 2 AM356_RS14310 PF01467 Cytidylyltransferase-like AM356_RS14315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM356_RS14315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM356_RS14315 PF06827 Zinc finger found in FPG and IleRS AM356_RS14320 PF04932 O-Antigen ligase AM356_RS14330 PF00534 Glycosyl transferases group 1 AM356_RS14330 PF13439 Glycosyltransferase Family 4 AM356_RS14340 PF00534 Glycosyl transferases group 1 AM356_RS14345 PF00471 Ribosomal protein L33 AM356_RS14350 PF00830 Ribosomal L28 family AM356_RS14360 PF04002 RadC-like JAB domain AM356_RS14365 PF02441 Flavoprotein AM356_RS14365 PF04127 DNA / pantothenate metabolism flavoprotein AM356_RS14370 PF00692 dUTPase AM356_RS14375 PF00440 Bacterial regulatory proteins, tetR family AM356_RS14380 PF00156 Phosphoribosyl transferase domain AM356_RS14385 PF01138 3' exoribonuclease family, domain 1 AM356_RS14385 PF03725 3' exoribonuclease family, domain 2 AM356_RS14390 PF03755 YicC-like family, N-terminal region AM356_RS14390 PF08340 Domain of unknown function (DUF1732) AM356_RS14410 PF13580 SIS domain AM356_RS14415 PF13649 Methyltransferase domain AM356_RS14420 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM356_RS14420 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM356_RS14425 PF18053 DNA gyrase B subunit insert domain AM356_RS14425 PF00986 DNA gyrase B subunit, carboxyl terminus AM356_RS14425 PF01751 Toprim domain AM356_RS14425 PF00204 DNA gyrase B AM356_RS14425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS14430 PF02463 RecF/RecN/SMC N terminal domain AM356_RS14435 PF02768 DNA polymerase III beta subunit, C-terminal domain AM356_RS14435 PF02767 DNA polymerase III beta subunit, central domain AM356_RS14435 PF00712 DNA polymerase III beta subunit, N-terminal domain AM356_RS14440 PF11638 DnaA N-terminal domain AM356_RS14440 PF08299 Bacterial dnaA protein helix-turn-helix AM356_RS14440 PF00308 Bacterial dnaA protein AM356_RS14445 PF00468 Ribosomal protein L34 AM356_RS14450 PF00825 Ribonuclease P AM356_RS14455 PF01809 Putative membrane protein insertion efficiency factor AM356_RS14460 PF14849 YidC periplasmic domain AM356_RS14460 PF02096 60Kd inner membrane protein AM356_RS14465 PF10396 GTP-binding protein TrmE N-terminus AM356_RS14465 PF01926 50S ribosome-binding GTPase AM356_RS14465 PF12631 MnmE helical domain AM356_RS14475 PF07804 HipA-like C-terminal domain AM356_RS14475 PF13657 HipA N-terminal domain AM356_RS14480 PF06496 Protein of unknown function (DUF1097) AM356_RS14495 PF03544 Gram-negative bacterial TonB protein C-terminal AM356_RS14515 PF03466 LysR substrate binding domain AM356_RS14515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS14520 PF00795 Carbon-nitrogen hydrolase AM356_RS14535 PF02634 FdhD/NarQ family AM356_RS14540 PF00384 Molybdopterin oxidoreductase AM356_RS14540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM356_RS14540 PF01568 Molydopterin dinucleotide binding domain AM356_RS14545 PF01568 Molydopterin dinucleotide binding domain AM356_RS14545 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM356_RS14545 PF00384 Molybdopterin oxidoreductase AM356_RS14550 PF13247 4Fe-4S dicluster domain AM356_RS14550 PF09163 Formate dehydrogenase N, transmembrane AM356_RS14555 PF01292 Prokaryotic cytochrome b561 AM356_RS14560 PF04216 Protein involved in formate dehydrogenase formation AM356_RS14565 PF12390 Selenocysteine synthase N terminal AM356_RS14565 PF03841 L-seryl-tRNA selenium transferase AM356_RS14570 PF09106 Elongation factor SelB, winged helix AM356_RS14570 PF09107 Elongation factor SelB, winged helix AM356_RS14570 PF03144 Elongation factor Tu domain 2 AM356_RS14570 PF00009 Elongation factor Tu GTP binding domain AM356_RS14575 PF00884 Sulfatase AM356_RS14580 PF01270 Glycosyl hydrolases family 8 AM356_RS14585 PF00483 Nucleotidyl transferase AM356_RS14590 PF08448 PAS fold AM356_RS14590 PF00990 Diguanylate cyclase, GGDEF domain AM356_RS14600 PF13181 Tetratricopeptide repeat AM356_RS14600 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AM356_RS14605 PF03170 Bacterial cellulose synthase subunit AM356_RS14610 PF07238 PilZ domain AM356_RS14610 PF03552 Cellulose synthase AM356_RS14610 PF00535 Glycosyl transferase family 2 AM356_RS14620 PF00480 ROK family AM356_RS14630 PF04076 Bacterial OB fold (BOF) protein AM356_RS14655 PF00577 Outer membrane usher protein AM356_RS14655 PF13954 PapC N-terminal domain AM356_RS14655 PF13953 PapC C-terminal domain AM356_RS14660 PF13954 PapC N-terminal domain AM356_RS14660 PF13953 PapC C-terminal domain AM356_RS14660 PF00577 Outer membrane usher protein AM356_RS14680 PF13533 Biotin-lipoyl like AM356_RS14685 PF02909 Tetracyclin repressor-like, C-terminal domain AM356_RS14685 PF00440 Bacterial regulatory proteins, tetR family AM356_RS14690 PF03606 C4-dicarboxylate anaerobic carrier AM356_RS14715 PF01266 FAD dependent oxidoreductase AM356_RS14725 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS14730 PF08402 TOBE domain AM356_RS14730 PF00005 ABC transporter AM356_RS14735 PF01380 SIS domain AM356_RS14740 PF00132 Bacterial transferase hexapeptide (six repeats) AM356_RS14740 PF12804 MobA-like NTP transferase domain AM356_RS14745 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AM356_RS14745 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM356_RS14750 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM356_RS14750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM356_RS14755 PF00231 ATP synthase AM356_RS14760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM356_RS14760 PF00306 ATP synthase alpha/beta chain, C terminal domain AM356_RS14760 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM356_RS14765 PF00213 ATP synthase delta (OSCP) subunit AM356_RS14770 PF00430 ATP synthase B/B' CF(0) AM356_RS14775 PF00137 ATP synthase subunit C AM356_RS14780 PF00119 ATP synthase A chain AM356_RS14785 PF03899 ATP synthase I chain AM356_RS14790 PF02527 rRNA small subunit methyltransferase G AM356_RS14795 PF01134 Glucose inhibited division protein A AM356_RS14795 PF13932 GidA associated domain AM356_RS14800 PF00258 Flavodoxin AM356_RS14805 PF01037 Lrp/AsnC ligand binding domain AM356_RS14810 PF03590 Aspartate-ammonia ligase AM356_RS14815 PF05762 VWA domain containing CoxE-like protein AM356_RS14820 PF07728 AAA domain (dynein-related subfamily) AM356_RS14820 PF17868 AAA lid domain AM356_RS14820 PF12592 Protein of unknown function (DUF3763) AM356_RS14825 PF00294 pfkB family carbohydrate kinase AM356_RS14830 PF07690 Major Facilitator Superfamily AM356_RS14835 PF00392 Bacterial regulatory proteins, gntR family AM356_RS14835 PF07729 FCD domain AM356_RS14860 PF02754 Cysteine-rich domain AM356_RS14865 PF02589 LUD domain AM356_RS14865 PF13183 4Fe-4S dicluster domain AM356_RS14865 PF11870 Domain of unknown function (DUF3390) AM356_RS14870 PF02589 LUD domain AM356_RS14875 PF00884 Sulfatase AM356_RS14880 PF00474 Sodium:solute symporter family AM356_RS14885 PF04341 Protein of unknown function, DUF485 AM356_RS14890 PF16177 Acetyl-coenzyme A synthetase N-terminus AM356_RS14890 PF13193 AMP-binding enzyme C-terminal domain AM356_RS14890 PF00501 AMP-binding enzyme AM356_RS14895 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM356_RS14895 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM356_RS14900 PF03475 3-alpha domain AM356_RS14900 PF03473 MOSC domain AM356_RS14905 PF01797 Transposase IS200 like AM356_RS14910 PF07282 Putative transposase DNA-binding domain AM356_RS14910 PF12323 Helix-turn-helix domain AM356_RS14910 PF01385 Probable transposase AM356_RS14915 PF00579 tRNA synthetases class I (W and Y) AM356_RS14920 PF13419 Haloacid dehalogenase-like hydrolase AM356_RS14925 PF00834 Ribulose-phosphate 3 epimerase family AM356_RS14930 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM356_RS14935 PF05036 Sporulation related domain AM356_RS14940 PF01761 3-dehydroquinate synthase AM356_RS14945 PF01202 Shikimate kinase AM356_RS14950 PF00263 Bacterial type II and III secretion system protein AM356_RS14950 PF03958 Bacterial type II/III secretion system short domain AM356_RS14970 PF00912 Transglycosylase AM356_RS14970 PF17092 Penicillin-binding protein OB-like domain AM356_RS14970 PF00905 Penicillin binding protein transpeptidase domain AM356_RS14975 PF03180 NLPA lipoprotein AM356_RS14980 PF00293 NUDIX domain AM356_RS14985 PF07095 Intracellular growth attenuator protein IgaA AM356_RS14990 PF01479 S4 domain AM356_RS14995 PF01430 Hsp33 protein AM356_RS15000 PF01293 Phosphoenolpyruvate carboxykinase AM356_RS15005 PF17954 Quercetinase C-terminal cupin domain AM356_RS15005 PF02678 Pirin AM356_RS15020 PF01384 Phosphate transporter family AM356_RS15025 PF10625 Universal stress protein B (UspB) AM356_RS15030 PF00582 Universal stress protein family AM356_RS15035 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM356_RS15035 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM356_RS15045 PF04445 Putative SAM-dependent methyltransferase AM356_RS15050 PF01432 Peptidase family M3 AM356_RS15070 PF16449 Fimbrillin MatB AM356_RS15075 PF18649 EcpB C-terminal domain AM356_RS15080 PF15976 CS1-pili formation C-terminal AM356_RS15080 PF16967 E-set like domain AM356_RS15120 PF04717 Type VI secretion system, phage-baseplate injector AM356_RS15125 PF05638 Type VI secretion system effector, Hcp AM356_RS15130 PF01844 HNH endonuclease AM356_RS15135 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM356_RS15140 PF00849 RNA pseudouridylate synthase AM356_RS15145 PF00313 'Cold-shock' DNA-binding domain AM356_RS15150 PF01418 Helix-turn-helix domain, rpiR family AM356_RS15150 PF01380 SIS domain AM356_RS15155 PF00367 phosphotransferase system, EIIB AM356_RS15155 PF02378 Phosphotransferase system, EIIC AM356_RS15160 PF00206 Lyase AM356_RS15160 PF10397 Adenylosuccinate lyase C-terminus AM356_RS15165 PF00209 Sodium:neurotransmitter symporter family AM356_RS15170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM356_RS15170 PF01568 Molydopterin dinucleotide binding domain AM356_RS15170 PF00384 Molybdopterin oxidoreductase AM356_RS15175 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AM356_RS15180 PF00480 ROK family AM356_RS15185 PF00474 Sodium:solute symporter family AM356_RS15190 PF04074 YhcH/YjgK/YiaL AM356_RS15195 PF01380 SIS domain AM356_RS15195 PF01418 Helix-turn-helix domain, rpiR family AM356_RS15200 PF00701 Dihydrodipicolinate synthetase family AM356_RS15215 PF02308 MgtC family AM356_RS15220 PF03825 Nucleoside H+ symporter AM356_RS15230 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM356_RS15230 PF00356 Bacterial regulatory proteins, lacI family AM356_RS15235 PF04976 DMSO reductase anchor subunit (DmsC) AM356_RS15240 PF12800 4Fe-4S binding domain AM356_RS15240 PF13247 4Fe-4S dicluster domain AM356_RS15245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM356_RS15245 PF01568 Molydopterin dinucleotide binding domain AM356_RS15245 PF00384 Molybdopterin oxidoreductase AM356_RS15255 PF13520 Amino acid permease AM356_RS15260 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM356_RS15260 PF01276 Orn/Lys/Arg decarboxylase, major domain AM356_RS15260 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM356_RS15265 PF13520 Amino acid permease AM356_RS15270 PF07690 Major Facilitator Superfamily AM356_RS15280 PF01081 KDPG and KHG aldolase AM356_RS15285 PF00294 pfkB family carbohydrate kinase AM356_RS15295 PF07729 FCD domain AM356_RS15295 PF00392 Bacterial regulatory proteins, gntR family AM356_RS15300 PF13378 Enolase C-terminal domain-like AM356_RS15300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM356_RS15305 PF07690 Major Facilitator Superfamily AM356_RS15315 PF00005 ABC transporter AM356_RS15320 PF01032 FecCD transport family AM356_RS15325 PF01032 FecCD transport family AM356_RS15330 PF01497 Periplasmic binding protein AM356_RS15335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM356_RS15340 PF02378 Phosphotransferase system, EIIC AM356_RS15345 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM356_RS15350 PF12833 Helix-turn-helix domain AM356_RS15350 PF07883 Cupin domain AM356_RS15355 PF02056 Family 4 glycosyl hydrolase AM356_RS15355 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM356_RS15360 PF04794 YdjC-like protein AM356_RS15365 PF13505 Outer membrane protein beta-barrel domain AM356_RS15375 PF08241 Methyltransferase domain AM356_RS15375 PF12697 Alpha/beta hydrolase family AM356_RS15380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM356_RS15385 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS15390 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS15390 PF12911 N-terminal TM domain of oligopeptide transport permease C AM356_RS15395 PF00005 ABC transporter AM356_RS15400 PF00005 ABC transporter AM356_RS15410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM356_RS15410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM356_RS15420 PF00701 Dihydrodipicolinate synthetase family AM356_RS15430 PF03401 Tripartite tricarboxylate transporter family receptor AM356_RS15440 PF01970 Tripartite tricarboxylate transporter TctA family AM356_RS15445 PF00356 Bacterial regulatory proteins, lacI family AM356_RS15455 PF02219 Methylenetetrahydrofolate reductase AM356_RS15460 PF04343 Protein of unknown function, DUF488 AM356_RS15465 PF01266 FAD dependent oxidoreductase AM356_RS15465 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM356_RS15470 PF00455 DeoR C terminal sensor domain AM356_RS15470 PF08220 DeoR-like helix-turn-helix domain AM356_RS15475 PF01694 Rhomboid family AM356_RS15475 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AM356_RS15480 PF00581 Rhodanese-like domain AM356_RS15485 PF01106 NifU-like domain AM356_RS15485 PF01521 Iron-sulphur cluster biosynthesis AM356_RS15490 PF00156 Phosphoribosyl transferase domain AM356_RS15495 PF00561 alpha/beta hydrolase fold AM356_RS15505 PF09012 FeoC like transcriptional regulator AM356_RS15510 PF17910 FeoB cytosolic helical domain AM356_RS15510 PF07664 Ferrous iron transport protein B C terminus AM356_RS15510 PF07670 Nucleoside recognition AM356_RS15510 PF02421 Ferrous iron transport protein B AM356_RS15515 PF04023 FeoA domain AM356_RS15525 PF04220 Der GTPase activator (YihI) AM356_RS15540 PF00860 Permease family AM356_RS15545 PF13332 Hemagglutinin repeat AM356_RS15545 PF05594 Haemagluttinin repeat AM356_RS15545 PF04829 Pre-toxin domain with VENN motif AM356_RS15545 PF05860 haemagglutination activity domain AM356_RS15545 PF14436 Bacterial EndoU nuclease AM356_RS15550 PF01648 4'-phosphopantetheinyl transferase superfamily AM356_RS15555 PF00106 short chain dehydrogenase AM356_RS15560 PF07977 FabA-like domain AM356_RS15565 PF00550 Phosphopantetheine attachment site AM356_RS15570 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM356_RS15570 PF01571 Aminomethyltransferase folate-binding domain AM356_RS15575 PF02801 Beta-ketoacyl synthase, C-terminal domain AM356_RS15575 PF00109 Beta-ketoacyl synthase, N-terminal domain AM356_RS15615 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS15620 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS15625 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM356_RS15630 PF01895 PhoU domain AM356_RS15635 PF00005 ABC transporter AM356_RS15640 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS15645 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS15650 PF12849 PBP superfamily domain AM356_RS15655 PF00512 His Kinase A (phospho-acceptor) domain AM356_RS15655 PF00672 HAMP domain AM356_RS15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS15660 PF00072 Response regulator receiver domain AM356_RS15660 PF00486 Transcriptional regulatory protein, C terminal AM356_RS15665 PF03449 Transcription elongation factor, N-terminal AM356_RS15665 PF01272 Transcription elongation factor, GreA/GreB, C-term AM356_RS15670 PF17674 HHH domain AM356_RS15670 PF09371 Tex-like protein N-terminal domain AM356_RS15670 PF00575 S1 RNA binding domain AM356_RS15670 PF16921 Tex protein YqgF-like domain AM356_RS15675 PF03783 Curli production assembly/transport component CsgG AM356_RS15685 PF05643 Putative bacterial lipoprotein (DUF799) AM356_RS15690 PF06969 HemN C-terminal domain AM356_RS15690 PF04055 Radical SAM superfamily AM356_RS15695 PF00072 Response regulator receiver domain AM356_RS15695 PF00158 Sigma-54 interaction domain AM356_RS15695 PF02954 Bacterial regulatory protein, Fis family AM356_RS15700 PF00512 His Kinase A (phospho-acceptor) domain AM356_RS15700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS15705 PF00120 Glutamine synthetase, catalytic domain AM356_RS15705 PF03951 Glutamine synthetase, beta-Grasp domain AM356_RS15710 PF03144 Elongation factor Tu domain 2 AM356_RS15710 PF00009 Elongation factor Tu GTP binding domain AM356_RS15710 PF00679 Elongation factor G C-terminus AM356_RS15735 PF13419 Haloacid dehalogenase-like hydrolase AM356_RS15740 PF02580 D-Tyr-tRNA(Tyr) deacylase AM356_RS15745 PF09500 Putative thioesterase (yiiD_Cterm) AM356_RS15745 PF00583 Acetyltransferase (GNAT) family AM356_RS15750 PF00849 RNA pseudouridylate synthase AM356_RS15750 PF01479 S4 domain AM356_RS15760 PF05170 AsmA family AM356_RS15765 PF00860 Permease family AM356_RS15770 PF03616 Sodium/glutamate symporter AM356_RS15775 PF17191 RecG wedge domain AM356_RS15775 PF00271 Helicase conserved C-terminal domain AM356_RS15775 PF00270 DEAD/DEAH box helicase AM356_RS15780 PF12105 SpoU, rRNA methylase, C-terminal AM356_RS15780 PF00588 SpoU rRNA Methylase family AM356_RS15785 PF04607 Region found in RelA / SpoT proteins AM356_RS15785 PF02824 TGS domain AM356_RS15785 PF13291 ACT domain AM356_RS15790 PF01192 RNA polymerase Rpb6 AM356_RS15795 PF00625 Guanylate kinase AM356_RS15800 PF03458 UPF0126 domain AM356_RS15805 PF12566 Protein of unknown function (DUF3748) AM356_RS15805 PF07676 WD40-like Beta Propeller Repeat AM356_RS15830 PF05746 DALR anticodon binding domain AM356_RS15830 PF02092 Glycyl-tRNA synthetase beta subunit AM356_RS15835 PF02091 Glycyl-tRNA synthetase alpha subunit AM356_RS15840 PF03352 Methyladenine glycosylase AM356_RS15845 PF00155 Aminotransferase class I and II AM356_RS15850 PF06826 Predicted Permease Membrane Region AM356_RS15850 PF02080 TrkA-C domain AM356_RS15855 PF07119 Protein of unknown function (DUF1375) AM356_RS15870 PF17287 POTRA domain AM356_RS15870 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM356_RS15870 PF08479 POTRA domain, ShlB-type AM356_RS15875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM356_RS15880 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS15885 PF12911 N-terminal TM domain of oligopeptide transport permease C AM356_RS15885 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS15890 PF00005 ABC transporter AM356_RS15890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM356_RS15895 PF00005 ABC transporter AM356_RS15895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM356_RS15900 PF04829 Pre-toxin domain with VENN motif AM356_RS15900 PF15526 Novel toxin 21 AM356_RS15900 PF05860 haemagglutination activity domain AM356_RS15900 PF13332 Hemagglutinin repeat AM356_RS15900 PF05594 Haemagluttinin repeat AM356_RS15905 PF00672 HAMP domain AM356_RS15905 PF00990 Diguanylate cyclase, GGDEF domain AM356_RS15905 PF00563 EAL domain AM356_RS15905 PF17154 Gammaproteobacterial periplasmic sensor domain AM356_RS15910 PF05193 Peptidase M16 inactive domain AM356_RS15910 PF00675 Insulinase (Peptidase family M16) AM356_RS15915 PF01361 Tautomerase enzyme AM356_RS15920 PF03631 Virulence factor BrkB AM356_RS15930 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM356_RS15935 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM356_RS15935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM356_RS15940 PF01266 FAD dependent oxidoreductase AM356_RS15950 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AM356_RS15955 PF12804 MobA-like NTP transferase domain AM356_RS15960 PF06288 Protein of unknown function (DUF1040) AM356_RS15965 PF01636 Phosphotransferase enzyme family AM356_RS15970 PF01323 DSBA-like thioredoxin domain AM356_RS15980 PF00476 DNA polymerase family A AM356_RS15980 PF01612 3'-5' exonuclease AM356_RS15980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM356_RS15980 PF01367 5'-3' exonuclease, C-terminal SAM fold AM356_RS15985 PF01327 Polypeptide deformylase AM356_RS15990 PF01926 50S ribosome-binding GTPase AM356_RS15995 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM356_RS16000 PF00117 Glutamine amidotransferase class-I AM356_RS16005 PF00202 Aminotransferase class-III AM356_RS16010 PF00027 Cyclic nucleotide-binding domain AM356_RS16010 PF13545 Crp-like helix-turn-helix domain AM356_RS16015 PF02566 OsmC-like protein AM356_RS16020 PF00485 Phosphoribulokinase / Uridine kinase family AM356_RS16025 PF06794 Uncharacterised protein family (UPF0270) AM356_RS16030 PF00561 alpha/beta hydrolase fold AM356_RS16040 PF01418 Helix-turn-helix domain, rpiR family AM356_RS16040 PF01380 SIS domain AM356_RS16045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM356_RS16045 PF08447 PAS fold AM356_RS16050 PF02203 Tar ligand binding domain homologue AM356_RS16050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM356_RS16050 PF00672 HAMP domain AM356_RS16055 PF02203 Tar ligand binding domain homologue AM356_RS16055 PF00672 HAMP domain AM356_RS16055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM356_RS16060 PF00005 ABC transporter AM356_RS16060 PF12848 ABC transporter AM356_RS16065 PF02525 Flavodoxin-like fold AM356_RS16070 PF02254 TrkA-N domain AM356_RS16070 PF00999 Sodium/hydrogen exchanger family AM356_RS16075 PF09526 Probable metal-binding protein (DUF2387) AM356_RS16080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM356_RS16085 PF04102 SlyX AM356_RS16090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM356_RS16090 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM356_RS16100 PF13309 HTH domain AM356_RS16100 PF08348 YheO-like PAS domain AM356_RS16105 PF02635 DsrE/DsrF-like family AM356_RS16110 PF02635 DsrE/DsrF-like family AM356_RS16115 PF04077 DsrH like protein AM356_RS16120 PF00164 Ribosomal protein S12/S23 AM356_RS16125 PF00177 Ribosomal protein S7p/S5e AM356_RS16130 PF14492 Elongation Factor G, domain II AM356_RS16130 PF03764 Elongation factor G, domain IV AM356_RS16130 PF00679 Elongation factor G C-terminus AM356_RS16130 PF00009 Elongation factor Tu GTP binding domain AM356_RS16130 PF03144 Elongation factor Tu domain 2 AM356_RS16135 PF00009 Elongation factor Tu GTP binding domain AM356_RS16135 PF03143 Elongation factor Tu C-terminal domain AM356_RS16135 PF03144 Elongation factor Tu domain 2 AM356_RS16140 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM356_RS16145 PF02357 Transcription termination factor nusG AM356_RS16145 PF00467 KOW motif AM356_RS16150 PF03946 Ribosomal protein L11, N-terminal domain AM356_RS16150 PF00298 Ribosomal protein L11, RNA binding domain AM356_RS16155 PF00687 Ribosomal protein L1p/L10e family AM356_RS16160 PF00466 Ribosomal protein L10 AM356_RS16165 PF00542 Ribosomal protein L7/L12 C-terminal domain AM356_RS16165 PF16320 Ribosomal protein L7/L12 dimerisation domain AM356_RS16170 PF04563 RNA polymerase beta subunit AM356_RS16170 PF04561 RNA polymerase Rpb2, domain 2 AM356_RS16170 PF04565 RNA polymerase Rpb2, domain 3 AM356_RS16170 PF10385 RNA polymerase beta subunit external 1 domain AM356_RS16170 PF04560 RNA polymerase Rpb2, domain 7 AM356_RS16170 PF00562 RNA polymerase Rpb2, domain 6 AM356_RS16175 PF00623 RNA polymerase Rpb1, domain 2 AM356_RS16175 PF04998 RNA polymerase Rpb1, domain 5 AM356_RS16175 PF04997 RNA polymerase Rpb1, domain 1 AM356_RS16175 PF05000 RNA polymerase Rpb1, domain 4 AM356_RS16175 PF04983 RNA polymerase Rpb1, domain 3 AM356_RS16180 PF04754 Putative transposase, YhgA-like AM356_RS16185 PF06968 Biotin and Thiamin Synthesis associated domain AM356_RS16185 PF04055 Radical SAM superfamily AM356_RS16190 PF05690 Thiazole biosynthesis protein ThiG AM356_RS16195 PF02597 ThiS family AM356_RS16200 PF00899 ThiF family AM356_RS16205 PF02581 Thiamine monophosphate synthase AM356_RS16210 PF13667 ThiC-associated domain AM356_RS16210 PF01964 Radical SAM ThiC family AM356_RS16220 PF09297 NADH pyrophosphatase zinc ribbon domain AM356_RS16220 PF00293 NUDIX domain AM356_RS16225 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM356_RS16230 PF04493 Endonuclease V AM356_RS16235 PF04222 Protein of unknown function (DUF416) AM356_RS16240 PF00216 Bacterial DNA-binding protein AM356_RS16245 PF07356 Protein of unknown function (DUF1481) AM356_RS16250 PF02844 Phosphoribosylglycinamide synthetase, N domain AM356_RS16250 PF02843 Phosphoribosylglycinamide synthetase, C domain AM356_RS16250 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM356_RS16255 PF01808 AICARFT/IMPCHase bienzyme AM356_RS16255 PF02142 MGS-like domain AM356_RS16285 PF00293 NUDIX domain AM356_RS16290 PF00465 Iron-containing alcohol dehydrogenase AM356_RS16295 PF04204 Homoserine O-succinyltransferase AM356_RS16300 PF01274 Malate synthase AM356_RS16305 PF00463 Isocitrate lyase family AM356_RS16310 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AM356_RS16315 PF01081 KDPG and KHG aldolase AM356_RS16320 PF00920 Dehydratase family AM356_RS16325 PF01614 Bacterial transcriptional regulator AM356_RS16325 PF09339 IclR helix-turn-helix domain AM356_RS16330 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM356_RS16330 PF00809 Pterin binding enzyme AM356_RS16330 PF02607 B12 binding domain AM356_RS16330 PF02310 B12 binding domain AM356_RS16330 PF02574 Homocysteine S-methyltransferase AM356_RS16345 PF00696 Amino acid kinase family AM356_RS16345 PF01842 ACT domain AM356_RS16350 PF00342 Phosphoglucose isomerase AM356_RS16355 PF04345 Chorismate lyase AM356_RS16360 PF01040 UbiA prenyltransferase family AM356_RS16365 PF01553 Acyltransferase AM356_RS16370 PF01219 Prokaryotic diacylglycerol kinase AM356_RS16375 PF01726 LexA DNA binding domain AM356_RS16375 PF00717 Peptidase S24-like AM356_RS16380 PF01475 Ferric uptake regulator family AM356_RS16385 PF00436 Single-strand binding protein family AM356_RS16390 PF17760 UvrA interaction domain AM356_RS16390 PF00005 ABC transporter AM356_RS16390 PF17755 UvrA DNA-binding domain AM356_RS16400 PF03313 Serine dehydratase alpha chain AM356_RS16405 PF00155 Aminotransferase class I and II AM356_RS16410 PF00842 Alanine racemase, C-terminal domain AM356_RS16410 PF01168 Alanine racemase, N-terminal domain AM356_RS16415 PF03796 DnaB-like helicase C terminal domain AM356_RS16415 PF00772 DnaB-like helicase N terminal domain AM356_RS16420 PF08240 Alcohol dehydrogenase GroES-like domain AM356_RS16420 PF00107 Zinc-binding dehydrogenase AM356_RS16425 PF01207 Dihydrouridine synthase (Dus) AM356_RS16440 PF00005 ABC transporter AM356_RS16440 PF08402 TOBE domain AM356_RS16445 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS16450 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS16455 PF13416 Bacterial extracellular solute-binding protein AM356_RS16460 PF01381 Helix-turn-helix AM356_RS16465 PF00419 Fimbrial protein AM356_RS16465 PF09222 Fimbrial adhesin F17-AG, lectin domain AM356_RS16470 PF00419 Fimbrial protein AM356_RS16475 PF13954 PapC N-terminal domain AM356_RS16475 PF00577 Outer membrane usher protein AM356_RS16475 PF13953 PapC C-terminal domain AM356_RS16480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS16480 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS16485 PF00419 Fimbrial protein AM356_RS16490 PF00892 EamA-like transporter family AM356_RS16495 PF01053 Cys/Met metabolism PLP-dependent enzyme AM356_RS16515 PF00936 BMC domain AM356_RS16520 PF00936 BMC domain AM356_RS16525 PF00936 BMC domain AM356_RS16530 PF00465 Iron-containing alcohol dehydrogenase AM356_RS16530 PF00171 Aldehyde dehydrogenase family AM356_RS16535 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM356_RS16540 PF00465 Iron-containing alcohol dehydrogenase AM356_RS16545 PF01228 Glycine radical AM356_RS16545 PF02901 Pyruvate formate lyase-like AM356_RS16550 PF13187 4Fe-4S dicluster domain AM356_RS16550 PF04055 Radical SAM superfamily AM356_RS16555 PF00936 BMC domain AM356_RS16560 PF06130 Phosphate propanoyltransferase AM356_RS16570 PF00893 Small Multidrug Resistance protein AM356_RS16575 PF00893 Small Multidrug Resistance protein AM356_RS16585 PF00873 AcrB/AcrD/AcrF family AM356_RS16600 PF09278 MerR, DNA binding AM356_RS16600 PF00376 MerR family regulatory protein AM356_RS16620 PF01514 Secretory protein of YscJ/FliF family AM356_RS16630 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AM356_RS16640 PF12833 Helix-turn-helix domain AM356_RS16645 PF03958 Bacterial type II/III secretion system short domain AM356_RS16645 PF00263 Bacterial type II and III secretion system protein AM356_RS16650 PF07201 HrpJ-like domain AM356_RS16655 PF00771 FHIPEP family AM356_RS16665 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM356_RS16665 PF18269 T3SS EscN ATPase C-terminal domain AM356_RS16665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM356_RS16685 PF00813 FliP family AM356_RS16690 PF01313 Bacterial export proteins, family 3 AM356_RS16695 PF01311 Bacterial export proteins, family 1 AM356_RS16700 PF01312 FlhB HrpN YscU SpaS Family AM356_RS16705 PF07720 Tetratricopeptide repeat AM356_RS16730 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM356_RS16730 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM356_RS16735 PF13649 Methyltransferase domain AM356_RS16740 PF00005 ABC transporter AM356_RS16745 PF01032 FecCD transport family AM356_RS16750 PF01497 Periplasmic binding protein AM356_RS16755 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM356_RS16755 PF00356 Bacterial regulatory proteins, lacI family AM356_RS16760 PF01202 Shikimate kinase AM356_RS16765 PF02447 GntP family permease AM356_RS16785 PF03062 MBOAT, membrane-bound O-acyltransferase family AM356_RS16790 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM356_RS16810 PF02631 RecX family AM356_RS16815 PF18416 N-acetylglucosamine binding protein domain 2 AM356_RS16815 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AM356_RS16820 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM356_RS16825 PF07180 CaiF/GrlA transcriptional regulator AM356_RS16830 PF00132 Bacterial transferase hexapeptide (six repeats) AM356_RS16835 PF00378 Enoyl-CoA hydratase/isomerase AM356_RS16840 PF13193 AMP-binding enzyme C-terminal domain AM356_RS16840 PF00501 AMP-binding enzyme AM356_RS16845 PF02515 CoA-transferase family III AM356_RS16850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM356_RS16850 PF02770 Acyl-CoA dehydrogenase, middle domain AM356_RS16850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM356_RS16855 PF02028 BCCT, betaine/carnitine/choline family transporter AM356_RS16860 PF01012 Electron transfer flavoprotein domain AM356_RS16865 PF01012 Electron transfer flavoprotein domain AM356_RS16865 PF00766 Electron transfer flavoprotein FAD-binding domain AM356_RS16870 PF01494 FAD binding domain AM356_RS16880 PF00083 Sugar (and other) transporter AM356_RS16885 PF17864 RuvB AAA lid domain AM356_RS16885 PF05491 RuvB C-terminal winged helix domain AM356_RS16885 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM356_RS16900 PF04011 LemA family AM356_RS16905 PF04536 TPM domain AM356_RS16925 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM356_RS16930 PF00206 Lyase AM356_RS16930 PF10415 Fumarase C C-terminus AM356_RS16935 PF04186 FxsA cytoplasmic membrane protein AM356_RS16940 PF00166 Chaperonin 10 Kd subunit AM356_RS16945 PF00118 TCP-1/cpn60 chaperonin family AM356_RS16950 PF01797 Transposase IS200 like AM356_RS16955 PF01385 Probable transposase AM356_RS16955 PF07282 Putative transposase DNA-binding domain AM356_RS16955 PF12323 Helix-turn-helix domain AM356_RS16960 PF13698 Domain of unknown function (DUF4156) AM356_RS16965 PF13460 NAD(P)H-binding AM356_RS16975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS16975 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS16990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS16990 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS16995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS16995 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS17000 PF00577 Outer membrane usher protein AM356_RS17000 PF13954 PapC N-terminal domain AM356_RS17000 PF13953 PapC C-terminal domain AM356_RS17010 PF04055 Radical SAM superfamily AM356_RS17015 PF08207 Elongation factor P (EF-P) KOW-like domain AM356_RS17015 PF01132 Elongation factor P (EF-P) OB domain AM356_RS17015 PF09285 Elongation factor P, C-terminal AM356_RS17020 PF02502 Ribose/Galactose Isomerase AM356_RS17025 PF12798 4Fe-4S binding domain AM356_RS17025 PF00037 4Fe-4S binding domain AM356_RS17030 PF00361 Proton-conducting membrane transporter AM356_RS17035 PF00146 NADH dehydrogenase AM356_RS17040 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM356_RS17040 PF00361 Proton-conducting membrane transporter AM356_RS17045 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM356_RS17050 PF00361 Proton-conducting membrane transporter AM356_RS17050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM356_RS17055 PF00374 Nickel-dependent hydrogenase AM356_RS17055 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM356_RS17055 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM356_RS17060 PF12838 4Fe-4S dicluster domain AM356_RS17065 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM356_RS17070 PF07450 Formate hydrogenlyase maturation protein HycH AM356_RS17075 PF01750 Hydrogenase maturation protease AM356_RS17080 PF00535 Glycosyl transferase family 2 AM356_RS17085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM356_RS17090 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS17095 PF12911 N-terminal TM domain of oligopeptide transport permease C AM356_RS17095 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS17100 PF00005 ABC transporter AM356_RS17105 PF00005 ABC transporter AM356_RS17115 PF04055 Radical SAM superfamily AM356_RS17120 PF11230 Protein of unknown function (DUF3029) AM356_RS17125 PF10144 Bacterial virulence factor haemolysin AM356_RS17130 PF18429 Domain of unknown function (DUF5609) AM356_RS17135 PF18073 Rubredoxin metal binding domain AM356_RS17140 PF13521 AAA domain AM356_RS17140 PF01381 Helix-turn-helix AM356_RS17150 PF00756 Putative esterase AM356_RS17150 PF11806 Domain of unknown function (DUF3327) AM356_RS17155 PF00245 Alkaline phosphatase AM356_RS17160 PF02690 Na+/Pi-cotransporter AM356_RS17175 PF05175 Methyltransferase small domain AM356_RS17175 PF08468 Methyltransferase small domain N-terminal AM356_RS17185 PF00583 Acetyltransferase (GNAT) family AM356_RS17200 PF03144 Elongation factor Tu domain 2 AM356_RS17200 PF00009 Elongation factor Tu GTP binding domain AM356_RS17200 PF16658 Class II release factor RF3, C-terminal domain AM356_RS17210 PF01734 Patatin-like phospholipase AM356_RS17215 PF01026 TatD related DNase AM356_RS17220 PF07662 Na+ dependent nucleoside transporter C-terminus AM356_RS17220 PF01773 Na+ dependent nucleoside transporter N-terminus AM356_RS17220 PF07670 Nucleoside recognition AM356_RS17225 PF01791 DeoC/LacD family aldolase AM356_RS17230 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AM356_RS17230 PF00591 Glycosyl transferase family, a/b domain AM356_RS17230 PF02885 Glycosyl transferase family, helical bundle domain AM356_RS17235 PF01676 Metalloenzyme superfamily AM356_RS17240 PF01048 Phosphorylase superfamily AM356_RS17245 PF03600 Citrate transporter AM356_RS17250 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM356_RS17255 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM356_RS17260 PF00224 Pyruvate kinase, barrel domain AM356_RS17260 PF02887 Pyruvate kinase, alpha/beta domain AM356_RS17265 PF07690 Major Facilitator Superfamily AM356_RS17275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS17275 PF02743 Cache domain AM356_RS17275 PF00512 His Kinase A (phospho-acceptor) domain AM356_RS17280 PF14532 Sigma-54 interaction domain AM356_RS17280 PF00072 Response regulator receiver domain AM356_RS17280 PF02954 Bacterial regulatory protein, Fis family AM356_RS17285 PF00391 PEP-utilising enzyme, mobile domain AM356_RS17285 PF05524 PEP-utilising enzyme, N-terminal AM356_RS17285 PF00381 PTS HPr component phosphorylation site AM356_RS17285 PF03610 PTS system fructose IIA component AM356_RS17290 PF02734 DAK2 domain AM356_RS17295 PF02733 Dak1 domain AM356_RS17310 PF07690 Major Facilitator Superfamily AM356_RS17315 PF02909 Tetracyclin repressor-like, C-terminal domain AM356_RS17315 PF00440 Bacterial regulatory proteins, tetR family AM356_RS17350 PF11202 Phosphoribosyl transferase (PRTase) AM356_RS17350 PF15608 PELOTA RNA binding domain AM356_RS17365 PF02342 TerD domain AM356_RS17370 PF02342 TerD domain AM356_RS17375 PF05099 Tellurite resistance protein TerB AM356_RS17380 PF03741 Integral membrane protein TerC family AM356_RS17385 PF02342 TerD domain AM356_RS17390 PF02342 TerD domain AM356_RS17400 PF02203 Tar ligand binding domain homologue AM356_RS17400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM356_RS17400 PF00672 HAMP domain AM356_RS17405 PF00672 HAMP domain AM356_RS17405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM356_RS17405 PF02203 Tar ligand binding domain homologue AM356_RS17410 PF03466 LysR substrate binding domain AM356_RS17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS17415 PF00384 Molybdopterin oxidoreductase AM356_RS17420 PF01654 Cytochrome bd terminal oxidase subunit I AM356_RS17425 PF02322 Cytochrome bd terminal oxidase subunit II AM356_RS17435 PF01062 Bestrophin, RFP-TM, chloride channel AM356_RS17450 PF04545 Sigma-70, region 4 AM356_RS17450 PF04546 Sigma-70, non-essential region AM356_RS17450 PF03979 Sigma-70 factor, region 1.1 AM356_RS17450 PF00140 Sigma-70 factor, region 1.2 AM356_RS17450 PF04542 Sigma-70 region 2 AM356_RS17450 PF04539 Sigma-70 region 3 AM356_RS17455 PF01807 CHC2 zinc finger AM356_RS17455 PF10410 DnaB-helicase binding domain of primase AM356_RS17455 PF08278 DNA primase DnaG DnaB-binding AM356_RS17455 PF08275 DNA primase catalytic core, N-terminal domain AM356_RS17460 PF01165 Ribosomal protein S21 AM356_RS17465 PF00814 Glycoprotease family AM356_RS17470 PF01474 Class-II DAHP synthetase family AM356_RS17490 PF02660 Glycerol-3-phosphate acyltransferase AM356_RS17495 PF02152 Dihydroneopterin aldolase AM356_RS17500 PF01743 Poly A polymerase head domain AM356_RS17500 PF01966 HD domain AM356_RS17500 PF12627 Probable RNA and SrmB- binding site of polymerase A AM356_RS17505 PF08239 Bacterial SH3 domain AM356_RS17510 PF01928 CYTH domain AM356_RS17515 PF08335 GlnD PII-uridylyltransferase AM356_RS17515 PF03710 Glutamate-ammonia ligase adenylyltransferase AM356_RS17520 PF01467 Cytidylyltransferase-like AM356_RS17520 PF00294 pfkB family carbohydrate kinase AM356_RS17525 PF04380 Membrane fusogenic activity AM356_RS17530 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM356_RS17535 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM356_RS17540 PF03738 Glutathionylspermidine synthase preATP-grasp AM356_RS17545 PF06693 Protein of unknown function (DUF1190) AM356_RS17550 PF02321 Outer membrane efflux protein AM356_RS17555 PF00293 NUDIX domain AM356_RS17560 PF00149 Calcineurin-like phosphoesterase AM356_RS17565 PF05728 Uncharacterised protein family (UPF0227) AM356_RS17570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM356_RS17570 PF00204 DNA gyrase B AM356_RS17570 PF00986 DNA gyrase B subunit, carboxyl terminus AM356_RS17570 PF01751 Toprim domain AM356_RS17575 PF03989 DNA gyrase C-terminal domain, beta-propeller AM356_RS17575 PF00521 DNA gyrase/topoisomerase IV, subunit A AM356_RS17580 PF01553 Acyltransferase AM356_RS17585 PF07732 Multicopper oxidase AM356_RS17585 PF07731 Multicopper oxidase AM356_RS17590 PF12951 Passenger-associated-transport-repeat AM356_RS17590 PF00082 Subtilase family AM356_RS17590 PF03797 Autotransporter beta-domain AM356_RS17600 PF00186 Dihydrofolate reductase AM356_RS17605 PF00149 Calcineurin-like phosphoesterase AM356_RS17610 PF04379 ApaG domain AM356_RS17615 PF00398 Ribosomal RNA adenine dimethylase AM356_RS17620 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM356_RS17625 PF09312 SurA N-terminal domain AM356_RS17630 PF03968 OstA-like protein AM356_RS17630 PF04453 LPS transport system D AM356_RS17635 PF05099 Tellurite resistance protein TerB AM356_RS17635 PF00226 DnaJ domain AM356_RS17640 PF00849 RNA pseudouridylate synthase AM356_RS17645 PF18337 RapA N-terminal Tudor like domain AM356_RS17645 PF00271 Helicase conserved C-terminal domain AM356_RS17645 PF18339 RapA N-terminal Tudor like domain 1 AM356_RS17645 PF12137 RNA polymerase recycling family C-terminal AM356_RS17645 PF00176 SNF2 family N-terminal domain AM356_RS17650 PF00136 DNA polymerase family B AM356_RS17650 PF03104 DNA polymerase family B, exonuclease domain AM356_RS17660 PF12728 Helix-turn-helix domain AM356_RS17665 PF00005 ABC transporter AM356_RS17670 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS17680 PF00293 NUDIX domain AM356_RS17685 PF02896 PEP-utilising enzyme, TIM barrel domain AM356_RS17685 PF01590 GAF domain AM356_RS17685 PF05524 PEP-utilising enzyme, N-terminal AM356_RS17685 PF00391 PEP-utilising enzyme, mobile domain AM356_RS17690 PF01790 Prolipoprotein diacylglyceryl transferase AM356_RS17695 PF00303 Thymidylate synthase AM356_RS17730 PF17946 RecC C-terminal domain AM356_RS17735 PF16187 Middle or third domain of peptidase_M16 AM356_RS17735 PF05193 Peptidase M16 inactive domain AM356_RS17735 PF00675 Insulinase (Peptidase family M16) AM356_RS17740 PF13361 UvrD-like helicase C-terminal domain AM356_RS17740 PF00580 UvrD/REP helicase N-terminal domain AM356_RS17740 PF12705 PD-(D/E)XK nuclease superfamily AM356_RS17745 PF13538 UvrD-like helicase C-terminal domain AM356_RS17750 PF00583 Acetyltransferase (GNAT) family AM356_RS17750 PF00696 Amino acid kinase family AM356_RS17755 PF01520 N-acetylmuramoyl-L-alanine amidase AM356_RS17755 PF11741 AMIN domain AM356_RS17775 PF03562 MltA specific insert domain AM356_RS17775 PF06725 3D domain AM356_RS17780 PF00899 ThiF family AM356_RS17785 PF02657 Fe-S metabolism associated domain AM356_RS17790 PF00266 Aminotransferase class-V AM356_RS17795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS17795 PF03466 LysR substrate binding domain AM356_RS17800 PF04241 Protein of unknown function (DUF423) AM356_RS17805 PF01728 FtsJ-like methyltransferase AM356_RS17805 PF18125 RlmM ferredoxin-like domain AM356_RS17810 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM356_RS17810 PF01367 5'-3' exonuclease, C-terminal SAM fold AM356_RS17815 PF03641 Possible lysine decarboxylase AM356_RS17815 PF11892 Domain of unknown function (DUF3412) AM356_RS17815 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AM356_RS17820 PF14489 QueF-like protein AM356_RS17820 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM356_RS17825 PF07348 Syd protein (SUKH-2) AM356_RS17830 PF04287 tRNA pseudouridine synthase C AM356_RS17835 PF04287 tRNA pseudouridine synthase C AM356_RS17835 PF00849 RNA pseudouridylate synthase AM356_RS17840 PF00367 phosphotransferase system, EIIB AM356_RS17840 PF02378 Phosphotransferase system, EIIC AM356_RS17850 PF00258 Flavodoxin AM356_RS17855 PF11944 Protein of unknown function (DUF3461) AM356_RS17860 PF14602 Hexapeptide repeat of succinyl-transferase AM356_RS17860 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM356_RS17865 PF08335 GlnD PII-uridylyltransferase AM356_RS17865 PF01842 ACT domain AM356_RS17865 PF01966 HD domain AM356_RS17870 PF00557 Metallopeptidase family M24 AM356_RS17875 PF00318 Ribosomal protein S2 AM356_RS17880 PF00889 Elongation factor TS AM356_RS17885 PF00696 Amino acid kinase family AM356_RS17890 PF01765 Ribosome recycling factor AM356_RS17895 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM356_RS17895 PF13288 DXP reductoisomerase C-terminal domain AM356_RS17895 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM356_RS17900 PF01255 Putative undecaprenyl diphosphate synthase AM356_RS17910 PF02163 Peptidase family M50 AM356_RS17910 PF17820 PDZ domain AM356_RS17915 PF01103 Surface antigen AM356_RS17915 PF07244 Surface antigen variable number repeat AM356_RS17920 PF03938 Outer membrane protein (OmpH-like) AM356_RS17925 PF00132 Bacterial transferase hexapeptide (six repeats) AM356_RS17925 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM356_RS17930 PF07977 FabA-like domain AM356_RS17935 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM356_RS17935 PF00132 Bacterial transferase hexapeptide (six repeats) AM356_RS17940 PF02684 Lipid-A-disaccharide synthetase AM356_RS17945 PF01351 Ribonuclease HII AM356_RS17950 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM356_RS17950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM356_RS17950 PF01336 OB-fold nucleic acid binding domain AM356_RS17950 PF14579 Helix-hairpin-helix motif AM356_RS17950 PF02811 PHP domain AM356_RS17955 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM356_RS17965 PF01171 PP-loop family AM356_RS17965 PF09179 TilS substrate binding domain AM356_RS17965 PF11734 TilS substrate C-terminal domain AM356_RS17970 PF07073 Modulator of Rho-dependent transcription termination (ROF) AM356_RS17975 PF17185 NlpE C-terminal OB domain AM356_RS17975 PF04170 NlpE N-terminal domain AM356_RS17980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM356_RS17980 PF04073 Aminoacyl-tRNA editing domain AM356_RS17980 PF03129 Anticodon binding domain AM356_RS17985 PF18389 TrmO C-terminal domain AM356_RS17985 PF01980 tRNA-methyltransferase O AM356_RS17995 PF03180 NLPA lipoprotein AM356_RS18000 PF00528 Binding-protein-dependent transport system inner membrane component AM356_RS18005 PF00005 ABC transporter AM356_RS18005 PF09383 NIL domain AM356_RS18040 PF03372 Endonuclease/Exonuclease/phosphatase family AM356_RS18055 PF01053 Cys/Met metabolism PLP-dependent enzyme AM356_RS18060 PF00324 Amino acid permease AM356_RS18065 PF04055 Radical SAM superfamily AM356_RS18070 PF01242 6-pyruvoyl tetrahydropterin synthase AM356_RS18075 PF00667 FAD binding domain AM356_RS18075 PF00258 Flavodoxin AM356_RS18075 PF00175 Oxidoreductase NAD-binding domain AM356_RS18080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM356_RS18080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM356_RS18085 PF01507 Phosphoadenosine phosphosulfate reductase family AM356_RS18090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM356_RS18090 PF10414 Sirohaem synthase dimerisation region AM356_RS18090 PF14824 Sirohaem biosynthesis protein central AM356_RS18095 PF01507 Phosphoadenosine phosphosulfate reductase family AM356_RS18100 PF00009 Elongation factor Tu GTP binding domain AM356_RS18110 PF04977 Septum formation initiator AM356_RS18115 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM356_RS18120 PF02542 YgbB family AM356_RS18125 PF01142 tRNA pseudouridine synthase D (TruD) AM356_RS18130 PF01975 Survival protein SurE AM356_RS18140 PF01551 Peptidase family M23 AM356_RS18140 PF01476 LysM domain AM356_RS18145 PF04545 Sigma-70, region 4 AM356_RS18145 PF04539 Sigma-70 region 3 AM356_RS18145 PF04542 Sigma-70 region 2 AM356_RS18145 PF00140 Sigma-70 factor, region 1.2 AM356_RS18150 PF05190 MutS family domain IV AM356_RS18150 PF05192 MutS domain III AM356_RS18150 PF05188 MutS domain II AM356_RS18150 PF01624 MutS domain I AM356_RS18150 PF00488 MutS domain V AM356_RS18155 PF13673 Acetyltransferase (GNAT) domain AM356_RS18160 PF00874 PRD domain AM356_RS18160 PF03123 CAT RNA binding domain AM356_RS18165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM356_RS18165 PF00367 phosphotransferase system, EIIB AM356_RS18165 PF02378 Phosphotransferase system, EIIC AM356_RS18170 PF02811 PHP domain AM356_RS18175 PF01381 Helix-turn-helix AM356_RS18180 PF00419 Fimbrial protein AM356_RS18190 PF00577 Outer membrane usher protein AM356_RS18190 PF13953 PapC C-terminal domain AM356_RS18190 PF13954 PapC N-terminal domain AM356_RS18195 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS18195 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS18205 PF00419 Fimbrial protein AM356_RS18225 PF00419 Fimbrial protein AM356_RS18230 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM356_RS18230 PF02753 Pili assembly chaperone PapD, C-terminal domain AM356_RS18235 PF13954 PapC N-terminal domain AM356_RS18235 PF00577 Outer membrane usher protein AM356_RS18235 PF13953 PapC C-terminal domain AM356_RS18265 PF00939 Sodium:sulfate symporter transmembrane region AM356_RS18270 PF03466 LysR substrate binding domain AM356_RS18270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM356_RS18275 PF05726 Pirin C-terminal cupin domain AM356_RS18275 PF02678 Pirin AM356_RS18280 PF00857 Isochorismatase family AM356_RS18300 PF01051 Initiator Replication protein AM356_RS18310 PF03389 MobA/MobL family AM356_RS18320 PF04851 Type III restriction enzyme, res subunit